1199 176 60 0 chr5 0 233 -199629917 + HERVH LTR ERV1 4903 5149 -2564 1313 111 18 5 chr5 234 451 -199629699 + HERVH LTR ERV1 5600 5819 -1894 * 2307 79 45 13 chr5 449 829 -199629321 + HERVH LTR ERV1 7322 7713 0 1625 148 120 68 chr5 829 1255 -199628895 + LTR7 LTR ERV1 1 448 -2 7434 180 20 10 chr5 1255 2679 -199627471 + MSTB-int LTR MaLR 214 1651 0 2601 157 7 25 chr5 2679 3113 -199627037 + MSTB LTR MaLR 1 426 0 213 222 0 0 chr5 4498 4561 -199625589 + (TG)n Simple_repeat Simple_repeat 2 64 0 4557 174 49 118 chr5 5185 5899 -199624251 + L1PB4 LINE L1 3517 4278 -1878 1822 144 32 32 chr5 5899 6245 -199623905 - THE1B LTR MaLR -18 346 1 4557 174 49 118 chr5 6245 8048 -199622102 + L1PB4 LINE L1 4278 6149 -7 324 333 42 30 chr5 8050 8218 -199621932 - L1MEc LINE L1 -4913 1483 1314 480 239 65 0 chr5 8219 8374 -199621776 + L1MEc LINE L1 735 899 -5497 982 251 29 57 chr5 8434 8945 -199621205 + L1MEc LINE L1 1003 1499 -4897 750 330 76 72 chr5 8959 9619 -199620531 - L1MEc LINE L1 -3385 2830 1334 295 222 0 0 chr5 9619 9682 -199620468 + MSTA LTR MaLR 366 428 0 5448 174 15 1 chr5 9682 10684 -199619466 + MSTA-int LTR MaLR 1 1016 -635 201 358 138 0 chr5 13608 13731 -199616419 - L2 LINE L2 -76 3237 3098 318 323 72 44 chr5 13981 14232 -199615918 + HAL1 LINE L1 1530 1787 -720 415 284 145 39 chr5 20274 20427 -199609723 + MLT1C LTR MaLR 47 182 -285 974 265 132 9 chr5 20427 20752 -199609398 + MLT1A1 LTR MaLR 1 365 0 415 284 145 39 chr5 20752 20936 -199609214 + MLT1C LTR MaLR 182 420 -47 706 310 102 16 chr5 21294 21949 -199608201 + L1ME LINE L1 5032 5737 -427 380 217 46 53 chr5 23827 23979 -199606171 + MER20 DNA MER1_type 6 156 -63 7403 119 101 103 chr5 25989 27689 -199602461 - pTR5 LTR ERV1 0 2438 742 529 335 108 40 chr5 27898 28379 -199601771 - L1MC5 LINE L1 -54 7907 7394 1041 254 38 42 chr5 28387 28493 -199601657 - L1M4 LINE L1 -2627 3519 3414 2095 131 0 10 chr5 28493 28805 -199601345 - AluSg SINE Alu -1 309 1 1041 254 38 42 chr5 28805 29221 -199600929 - L1M4 LINE L1 -2732 3414 2999 764 269 36 49 chr5 31317 31693 -199598457 - MLT1B LTR MaLR -12 378 1 207 284 45 23 chr5 35476 35652 -199594498 + (GGCTG)n Simple_repeat Simple_repeat 1 180 0 221 298 32 13 chr5 39932 40041 -199590109 + MIR SINE MIR 80 151 -57 279 264 0 66 chr5 40302 40423 -199589727 + C-rich Low_complexity Low_complexity 4 116 0 363 246 29 51 chr5 40442 40617 -199589533 + C-rich Low_complexity Low_complexity 5 175 0 285 274 102 15 chr5 41300 41497 -199588653 + MLT1D LTR MaLR 33 246 -259 411 297 76 68 chr5 43643 43906 -199586244 + L1ME LINE L1 674 938 -5181 186 385 33 16 chr5 44510 44632 -199585518 + L2 LINE L2 3148 3271 -1 235 214 0 0 chr5 46831 46887 -199583263 + (TG)n Simple_repeat Simple_repeat 1 56 0 1889 166 13 0 chr5 46999 47300 -199582850 - AluSx SINE Alu -7 305 1 2339 292 76 60 chr5 47350 49109 -199581041 + L1ME LINE L1 3397 5183 -946 826 203 102 0 chr5 49111 49308 -199580842 - Tigger1 DNA MER2_type 0 2418 2202 764 183 14 0 chr5 49306 49448 -199580702 - Tigger1 DNA MER2_type -2269 149 6 * 320 314 66 8 chr5 49459 49580 -199580570 + L1ME LINE L1 5186 5313 -816 204 146 24 0 chr5 49546 49587 -199580563 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 * 518 186 144 8 chr5 49611 49729 -199580421 + AluJo SINE Alu 1 134 -178 1173 229 27 53 chr5 49742 50117 -199580033 + L1ME LINE L1 5296 5660 -489 2138 100 7 32 chr5 51279 51588 -199578562 - AluY SINE Alu -5 306 6 12050 209 31 12 chr5 51611 52469 -199577681 - L1PB1 LINE L1 0 6867 6027 243 0 0 0 chr5 52469 52496 -199577654 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 1819 163 3 3 chr5 52496 52772 -199577378 - AluSx SINE Alu -32 280 5 12050 209 31 12 chr5 52772 57568 -199572582 - L1PB1 LINE L1 -839 6028 1109 801 220 11 0 chr5 57571 57748 -199572402 - L1PB1 LINE L1 -6679 184 6 279 273 31 8 chr5 58579 58707 -199571443 + (TG)n Simple_repeat Simple_repeat 2 132 0 1261 211 0 84 chr5 58822 59145 -199571005 - AluJo SINE Alu -16 296 1 1285 260 57 44 chr5 59850 60512 -199569638 + L1ME LINE L1 4798 5479 -687 621 175 0 44 chr5 60512 60649 -199569501 + FLAM_C SINE Alu 3 133 0 1285 260 57 44 chr5 60649 60853 -199569297 + L1ME LINE L1 5479 5679 -487 1965 189 8 3 chr5 60865 61245 -199568905 - MLT1B LTR MaLR -8 382 1 234 250 0 0 chr5 62310 62374 -199567776 + (CA)n Simple_repeat Simple_repeat 1 64 0 1655 198 31 0 chr5 62863 63151 -199566999 - AluJb SINE Alu -15 297 1 415 332 87 39 chr5 63244 63855 -199566295 - L1MC4a LINE L1 -646 5520 5258 552 329 124 45 chr5 63859 64415 -199565735 - L1MC4a LINE L1 -897 5249 4650 207 273 23 30 chr5 67083 67215 -199562935 + (CA)n Simple_repeat Simple_repeat 1 131 0 195 400 9 0 chr5 68924 69034 -199561116 + L2 LINE L2 3145 3255 -17 188 402 51 8 chr5 69145 69262 -199560888 + L3b LINE CR1 1455 1576 -7 2272 85 0 69 chr5 69494 69812 -199560338 - AluSx SINE Alu -16 296 1 950 82 48 0 chr5 71802 71948 -199558202 - MER41A LTR ERV1 0 554 402 281 263 46 72 chr5 72416 72568 -199557582 - L1M4 LINE L1 -1201 4945 4798 1607 199 3 10 chr5 73289 73590 -199556560 + AluJo SINE Alu 1 299 -13 204 240 27 13 chr5 73712 73787 -199556363 + (CA)n Simple_repeat Simple_repeat 1 76 0 575 208 38 50 chr5 74880 75039 -199555111 + L1ME LINE L1 5523 5679 -487 2009 184 8 3 chr5 75051 75431 -199554719 - MLT1B LTR MaLR -8 382 1 708 209 41 0 chr5 75806 75978 -199554172 - L1PBa LINE L1 -6679 184 6 332 327 92 52 chr5 76398 76780 -199553370 - L1M4 LINE L1 -1128 5018 4622 32 0 0 0 chr5 79098 79130 -199551020 + GC_rich Low_complexity Low_complexity 1 32 0 621 175 0 44 chr5 81432 81569 -199548581 - FLAM_C SINE Alu 0 133 3 896 289 65 20 chr5 81570 82233 -199547917 - L1ME LINE L1 -675 5491 4796 1464 228 3 10 chr5 82938 83236 -199546914 + AluJo SINE Alu 1 296 -16 300 257 29 0 chr5 83351 83456 -199546694 + (CA)n Simple_repeat Simple_repeat 2 109 0 25 0 0 0 chr5 83522 83547 -199546603 + AT_rich Low_complexity Low_complexity 1 25 0 5375 165 20 35 chr5 84014 84965 -199545185 + L1PB1 LINE L1 4362 5285 -866 1836 160 3 3 chr5 84965 85273 -199544877 + AluSx SINE Alu 5 312 0 5375 165 20 35 chr5 85273 86128 -199544022 + L1PB1 LINE L1 5285 6151 0 2216 100 3 29 chr5 86151 86460 -199543690 + AluY SINE Alu 6 306 -5 319 303 197 16 chr5 86658 86912 -199543238 + L1ME LINE L1 5335 5634 -536 1181 204 23 80 chr5 87624 88011 -199542139 - L1ME LINE L1 -489 5677 5313 488 197 145 8 chr5 88024 88141 -199542009 - AluJo SINE Alu -178 134 2 783 180 6 25 chr5 88301 88462 -199541688 + Tigger1 DNA MER2_type 6 163 -2255 * 793 181 124 0 chr5 88443 88636 -199541514 + Tigger1 DNA MER2_type 2202 2418 0 2332 287 78 66 chr5 88638 90403 -199539747 - L1ME LINE L1 -946 5200 3414 1501 183 10 36 chr5 90455 90756 -199539394 + AluSx SINE Alu 1 293 -19 26 0 0 0 chr5 91318 91344 -199538806 + GC_rich Low_complexity Low_complexity 1 26 0 197 290 29 0 chr5 92056 92125 -199538025 - MIR SINE MIR -57 151 81 208 277 45 28 chr5 96465 96642 -199533508 + (CAGCC)n Simple_repeat Simple_repeat 1 180 0 723 265 49 48 chr5 100425 100801 -199529349 + MLT1B LTR MaLR 1 378 -12 392 238 8 0 chr5 106450 106576 -199523574 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 373 260 6 6 chr5 107523 107700 -199522450 + (TG)n Simple_repeat Simple_repeat 1 177 0 289 264 0 0 chr5 107715 107836 -199522314 + (TG)n Simple_repeat Simple_repeat 1 121 0 327 292 136 30 chr5 110056 110292 -199519858 + L1M4 LINE L1 2 262 -6280 1349 269 114 8 chr5 110365 110893 -199519257 + L1M4 LINE L1 3754 4337 -2307 423 262 47 75 chr5 111423 111637 -199518513 + L1M4 LINE L1 5604 5811 -833 353 241 17 26 chr5 111758 111874 -199518276 - L1M4 LINE L1 -1465 4681 4567 372 350 55 12 chr5 111880 112043 -199518107 + L1M4 LINE L1 1720 1889 -4755 357 223 39 39 chr5 113916 114019 -199516131 + MER91C DNA MER1_type 20 122 -18 279 247 32 21 chr5 115100 115193 -199514957 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 233 250 147 26 chr5 115425 115541 -199514609 - L2 LINE L2 -277 3036 2907 202 301 108 0 chr5 115683 115776 -199514374 - L2 LINE L2 -738 2576 2474 313 190 51 0 chr5 116164 116243 -199513907 - LTR50 LTR ERVL -2 793 711 261 175 16 0 chr5 116367 116430 -199513720 - LTR50 LTR ERVL -277 518 455 338 276 23 49 chr5 116557 116865 -199513285 - L1MCa LINE L1 -4727 1699 1400 * 4013 119 52 7 chr5 116843 117971 -199512179 - L1PBa LINE L1 -4940 1923 595 239 219 14 55 chr5 118403 118476 -199511674 - L1MCa LINE L1 -5954 898 829 2273 116 7 0 chr5 118560 118863 -199511287 + AluSx SINE Alu 1 305 -7 731 291 108 6 chr5 119433 119756 -199510394 - MLT1C LTR MaLR -7 460 105 1069 285 74 19 chr5 119857 120618 -199509532 + L1M4 LINE L1 2253 3053 -3591 1093 198 142 20 chr5 120622 120966 -199509184 - MLT1B LTR MaLR -4 386 1 4005 255 106 37 chr5 120966 122607 -199507543 + L1M4 LINE L1 3049 4803 -1841 4786 175 29 32 chr5 122727 123703 -199506447 + MSTB-int LTR MaLR 679 1651 0 2654 167 5 16 chr5 123703 124134 -199506016 + MSTB LTR MaLR 1 426 0 2209 92 0 3 chr5 125450 125734 -199504416 + AluY SINE Alu 1 283 -28 867 306 102 23 chr5 125767 126685 -199503465 - L1MEd LINE L1 -4873 1246 321 1937 188 37 37 chr5 127565 127997 -199502153 + MSTB1 LTR MaLR 1 432 0 266 188 47 31 chr5 129792 129856 -199500294 + MIR SINE MIR 77 141 -67 1152 69 0 0 chr5 131217 131348 -199498802 + AluY SINE Alu 1 131 -180 297 0 0 0 chr5 131351 131384 -199498766 + (A)n Simple_repeat Simple_repeat 1 33 0 1271 141 0 0 chr5 131384 131569 -199498581 + AluY SINE Alu 119 303 -8 2085 248 49 24 chr5 131873 132611 -199497539 + L1M4 LINE L1 816 1571 -4971 1259 191 4 4 chr5 132611 132846 -199497304 + Tigger7 DNA MER2_type 1 235 -315 630 178 0 0 chr5 132844 132945 -199497205 + Tigger7 DNA MER2_type 2381 2481 -6 * 2202 222 27 24 chr5 132959 133685 -199496465 + L1M4 LINE L1 1570 2390 -4256 1228 223 28 14 chr5 133685 133972 -199496178 + AluJo SINE Alu 1 291 -21 2202 222 27 24 chr5 133972 133993 -199496157 + L1M4 LINE L1 2390 2409 -4237 1995 181 37 37 chr5 134558 134990 -199495160 + MSTB1 LTR MaLR 1 432 0 254 211 60 0 chr5 136784 136857 -199493293 + MIR SINE MIR 76 135 -73 2291 96 0 69 chr5 138206 138540 -199491610 + AluY SINE Alu 1 311 0 2068 243 54 27 chr5 138835 139571 -199490579 + L1ME4a LINE L1 816 1571 -4971 1239 182 22 4 chr5 139571 139802 -199490348 + Tigger7 DNA MER2_type 1 235 -315 636 178 0 0 chr5 139800 139901 -199490249 + Tigger7 DNA MER2_type 2381 2481 -6 * 2246 229 30 43 chr5 139915 140643 -199489507 + L1ME4a LINE L1 1570 2369 -4277 1573 194 32 7 chr5 140643 140927 -199489223 + AluJo SINE Alu 1 291 -21 2246 229 30 43 chr5 140927 141262 -199488888 + L1ME4a LINE L1 2369 2707 -3939 879 305 103 17 chr5 141620 142688 -199487462 + L1ME4a LINE L1 5222 6383 -285 214 289 72 59 chr5 143151 143303 -199486847 - MIR SINE MIR -81 181 28 1147 135 12 0 chr5 144015 144185 -199485965 - AluSg/x SINE Alu -7 303 132 1968 88 11 4 chr5 144185 144448 -199485702 - AluY SINE Alu -14 297 33 303 28 0 0 chr5 144468 144504 -199485646 + (CA)n Simple_repeat Simple_repeat 2 37 0 497 256 56 32 chr5 144818 145068 -199485082 + MLT1A1 LTR MaLR 19 274 -91 * 735 197 48 16 chr5 145065 145253 -199484897 + MLT1A2 LTR MaLR 181 374 0 327 295 103 58 chr5 146385 146609 -199483541 + L1ME4a LINE L1 6364 6597 -22 859 312 114 65 chr5 147171 147829 -199482321 + L1MC1 LINE L1 4560 5249 -897 366 339 60 35 chr5 147833 148487 -199481663 + L1MC1 LINE L1 5258 5976 -357 1660 193 30 0 chr5 148537 148833 -199481317 + AluJb SINE Alu 1 305 -7 248 234 0 0 chr5 149320 149384 -199480766 + (TG)n Simple_repeat Simple_repeat 1 64 0 2113 179 16 5 chr5 150447 150833 -199479317 + MLT1B LTR MaLR 1 390 0 790 236 19 28 chr5 150837 151053 -199479097 - L1ME LINE L1 -487 5662 5449 266 248 0 16 chr5 151054 151149 -199479001 - L1ME LINE L1 -483 5664 5574 760 333 62 19 chr5 151307 151841 -199478309 - L1ME LINE L1 -2176 3953 3397 1895 165 14 0 chr5 151891 152188 -199477962 + AluSx SINE Alu 1 301 -11 235 214 0 0 chr5 152300 152356 -199477794 + (CA)n Simple_repeat Simple_repeat 1 56 0 186 385 33 16 chr5 154465 154587 -199475563 - L2 LINE L2 -1 3271 3148 414 271 80 69 chr5 155191 155453 -199474697 - L1ME LINE L1 -5181 938 674 252 274 107 20 chr5 157974 158171 -199471979 - MLT1D LTR MaLR -259 246 33 394 139 0 64 chr5 159382 159555 -199470595 + (TG)n Simple_repeat Simple_repeat 1 162 0 389 230 0 58 chr5 159572 159763 -199470387 + (TG)n Simple_repeat Simple_repeat 1 180 0 298 184 8 32 chr5 159776 159901 -199470249 + (TG)n Simple_repeat Simple_repeat 1 122 0 378 306 39 63 chr5 160141 160501 -199469649 - L1M4c LINE L1 -4982 1402 1052 2106 114 10 0 chr5 160501 160798 -199469352 + AluSx SINE Alu 1 300 -12 378 306 39 63 chr5 160798 160852 -199469298 - L1M4c LINE L1 -5332 1052 998 721 301 78 19 chr5 161118 161590 -199468560 - L1ME LINE L1 -746 5383 4884 1113 272 111 37 chr5 161691 162582 -199467568 - L1ME LINE L1 -1460 4669 3713 475 313 37 0 chr5 162612 162746 -199467404 + MIR SINE MIR 112 250 -12 339 340 14 0 chr5 162848 162989 -199467161 - L1ME LINE L1 -2506 3623 3481 281 294 9 0 chr5 163368 163477 -199466673 - L1ME LINE L1 -2676 3453 3344 331 320 119 48 chr5 163860 164076 -199466074 - L1ME LINE L1 -5076 1043 793 2659 42 0 0 chr5 164076 164387 -199465763 - AluY SINE Alu 0 311 1 331 320 119 48 chr5 164387 164507 -199465643 - L1ME LINE L1 -5326 793 683 279 283 81 0 chr5 164817 164965 -199465185 - L1MDa LINE L1 -4548 1992 1841 225 0 0 0 chr5 165624 165649 -199464501 + (TA)n Simple_repeat Simple_repeat 2 26 0 214 260 26 13 chr5 171305 171382 -199458768 + C-rich Low_complexity Low_complexity 4 81 0 1631 266 90 26 chr5 172526 173244 -199456906 + L1ME LINE L1 4661 5425 -756 382 335 137 13 chr5 173562 173875 -199456275 + L1ME LINE L1 5404 5755 -411 215 269 20 60 chr5 180367 180516 -199449634 + (CAGTG)n Simple_repeat Simple_repeat 1 143 0 * 235 259 29 69 chr5 180463 180637 -199449513 + (CGGTG)n Simple_repeat Simple_repeat 3 169 0 305 278 0 22 chr5 181867 182138 -199448012 + (CA)n Simple_repeat Simple_repeat 1 265 0 322 339 76 38 chr5 185352 185641 -199444509 + HAL1 LINE L1 1530 1829 -678 305 273 204 24 chr5 191930 192099 -199438051 + MLT1C LTR MaLR 25 162 -305 1005 259 132 9 chr5 192099 192424 -199437726 + MLT1A1 LTR MaLR 1 365 0 305 273 204 24 chr5 192424 192608 -199437542 + MLT1C LTR MaLR 162 420 -47 694 311 102 16 chr5 192966 193621 -199436529 + L1ME LINE L1 5032 5737 -427 25 31 0 0 chr5 198967 198999 -199431151 + GC_rich Low_complexity Low_complexity 1 32 0 192 61 20 61 chr5 199107 199156 -199430994 + (CCCCG)n Simple_repeat Simple_repeat 3 49 0 427 245 49 120 chr5 201175 201565 -199428585 - MLT1C LTR MaLR -7 383 15 414 296 0 0 chr5 202402 202742 -199427408 + (TG)n Simple_repeat Simple_repeat 1 340 0 3538 169 35 1 chr5 203403 204112 -199426038 + L1PB4 LINE L1 3517 4249 -1897 1797 147 32 32 chr5 204117 204463 -199425687 - THE1B LTR MaLR -18 346 1 4463 172 56 2 chr5 204464 206280 -199423870 + L1PB4 LINE L1 4246 6149 -7 462 235 85 0 chr5 206451 206604 -199423546 + L1MEc LINE L1 735 900 -5496 984 236 31 64 chr5 206662 207175 -199422975 + L1MEc LINE L1 1002 1497 -4899 771 335 83 76 chr5 207179 207886 -199422264 - L1MDa LINE L1 -3374 3166 1600 270 122 0 0 chr5 207890 207931 -199422219 + MSTA LTR MaLR 379 419 -9 1161 157 19 0 chr5 207940 208156 -199421994 + MSTA-int LTR MaLR 1 220 -1431 1568 146 114 74 chr5 208156 208587 -199421563 + LTR7 LTR ERV1 1 448 -2 834 152 26 26 chr5 208591 208822 -199421328 + HERVH LTR ERV1 2 232 -7481 778 205 80 0 chr5 208955 209179 -199420971 - L1MEc LINE L1 -4260 2136 1895 468 255 20 7 chr5 209223 209376 -199420774 - L1MEc LINE L1 -6205 191 37 2359 84 0 0 chr5 209384 209682 -199420468 - AluY SINE Alu -13 298 1 227 229 71 64 chr5 209723 209863 -199420287 - HAL1b LINE L1 -13 1335 1195 234 258 174 23 chr5 210749 210881 -199419269 + L2 LINE L2 2963 3114 -158 2008 125 17 0 chr5 212743 213030 -199417120 + AluSq SINE Alu 4 295 -18 4422 115 63 9 chr5 213112 213765 -199416385 - LTR12 LTR ERV1 0 688 1 603 195 13 6 chr5 214678 214837 -199415313 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 254 250 0 0 chr5 216275 216327 -199413823 + LTR30 LTR ERV1 1 52 -670 1067 130 140 23 chr5 216327 216581 -199413569 + LTR12 LTR ERV1 55 2032 -406 280 227 0 0 chr5 216582 216657 -199413493 + LTR30 LTR ERV1 553 627 -95 742 112 26 0 chr5 216657 216773 -199413377 + LTR12 LTR ERV1 362 480 -234 387 335 94 12 chr5 221023 221193 -199408957 + L1MC4 LINE L1 6459 6642 -1400 862 261 109 7 chr5 221200 221503 -199408647 - MER2 DNA MER2_type -8 337 4 653 251 32 58 chr5 222003 222099 -199408051 + L1MEc LINE L1 2125 2222 -4174 2262 100 0 3 chr5 222099 222398 -199407752 - AluSx SINE Alu -14 298 1 653 251 32 58 chr5 222398 222643 -199407507 + L1MEc LINE L1 2222 2457 -3939 * 1309 223 45 16 chr5 222640 223067 -199407083 + L1ME1 LINE L1 5723 6161 -5 2033 140 3 9 chr5 223253 223568 -199406582 + AluSq SINE Alu 1 313 0 29 60 0 0 chr5 226485 226535 -199403615 + GC_rich Low_complexity Low_complexity 1 50 0 22 99 0 0 chr5 226702 226773 -199403377 + GC_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr5 226998 227019 -199403131 + GC_rich Low_complexity Low_complexity 1 21 0 2199 68 72 0 chr5 228244 228536 -199401614 - AluSp SINE Alu 0 313 1 254 234 54 72 chr5 232822 232933 -199397217 + L2 LINE L2 3205 3313 0 1026 135 3 22 chr5 232936 233303 -199396847 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 891 187 5 18 chr5 233315 233754 -199396396 + (TGGA)n Simple_repeat Simple_repeat 1 433 0 290 336 0 10 chr5 233854 233958 -199396192 + (TGGG)n Simple_repeat Simple_repeat 1 103 0 387 312 89 7 chr5 233960 234144 -199396006 + MIR SINE MIR 3 200 -62 929 222 0 0 chr5 234437 234613 -199395537 + AluJb SINE Alu 136 311 -1 450 214 21 7 chr5 234627 234767 -199395383 + GA-rich Low_complexity Low_complexity 1 142 0 562 161 193 6 chr5 235849 236010 -199394140 - L1MC2 LINE L1 0 6344 6154 186 276 60 75 chr5 236659 236793 -199393357 + L3 LINE CR1 517 648 -929 1123 250 118 53 chr5 237835 238343 -199391807 - MLT1F LTR MaLR 0 542 2 2785 100 11 0 chr5 238374 238745 -199391405 - THE1C LTR MaLR 0 375 1 272 361 53 34 chr5 238756 238974 -199391176 - MIR3 SINE MIR -10 252 30 1138 248 42 121 chr5 242633 243509 -199386641 + L1M4 LINE L1 2755 3561 -2585 321 304 14 16 chr5 243532 243699 -199386451 - L1 LINE L1 -1722 4424 4260 841 156 13 26 chr5 243979 244133 -199386017 - AluJo SINE Alu -131 181 30 202 213 38 50 chr5 244320 244400 -199385750 + (CGGGG)n Simple_repeat Simple_repeat 1 79 0 28 0 0 0 chr5 244458 244486 -199385664 + GC_rich Low_complexity Low_complexity 1 28 0 230 279 243 29 chr5 246145 246281 -199383869 - MIR3 SINE MIR -26 182 18 197 211 19 0 chr5 246915 246967 -199383183 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 2208 92 0 3 chr5 247305 247598 -199382552 + AluSc SINE Alu 1 292 -17 1906 154 0 22 chr5 247607 247926 -199382224 + AluJb SINE Alu 1 312 0 238 297 55 0 chr5 249090 249181 -199380969 + MER5A DNA MER1_type 14 109 -80 1983 96 17 7 chr5 250907 251200 -199378950 + AluY SINE Alu 1 296 -15 265 208 49 87 chr5 252526 252709 -199377441 + (CATCC)n Simple_repeat Simple_repeat 1 176 0 320 291 36 0 chr5 256765 256875 -199373275 + MIR SINE MIR 38 151 -111 180 111 0 0 chr5 258061 258088 -199372062 + (TG)n Simple_repeat Simple_repeat 2 28 0 210 37 0 0 chr5 261311 261338 -199368812 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 347 250 56 12 chr5 262761 262941 -199367209 + L1MCa LINE L1 1690 1969 -4564 1604 88 22 9 chr5 263000 263227 -199366923 - MER30 DNA MER1_type 0 230 1 207 0 0 0 chr5 264016 264039 -199366111 + (CAA)n Simple_repeat Simple_repeat 2 24 0 241 202 147 9 chr5 264580 264689 -199365461 - L1MB8 LINE L1 -77 6101 5978 317 309 47 0 chr5 265549 265698 -199364452 + L1ME LINE L1 167 322 -5883 254 296 142 12 chr5 266102 266271 -199363879 + L1ME LINE L1 810 1000 -5396 541 231 54 51 chr5 266440 266700 -199363450 + MER4C LTR ERV1 275 683 -16 694 230 32 8 chr5 266742 266994 -199363156 + L1ME LINE L1 2788 3045 -3170 1739 133 158 142 chr5 266994 267718 -199362432 - LTR12 LTR ERV1 -133 2017 54 261 176 20 0 chr5 267718 267769 -199362381 - LTR30 LTR ERV1 -670 52 1 3492 257 79 19 chr5 267770 269313 -199360837 + L1ME LINE L1 3043 4677 -1538 279 304 0 10 chr5 269493 269595 -199360555 - MIR SINE MIR -72 136 36 4720 166 41 8 chr5 271544 272340 -199357810 - L1PA16 LINE L1 -9 6157 5298 2341 63 0 7 chr5 272340 272640 -199357510 - AluY SINE Alu -13 298 1 4720 166 41 8 chr5 272640 273153 -199356997 - L1PA16 LINE L1 -868 5298 4803 297 226 0 0 chr5 274987 275049 -199355101 - MLT1D LTR MaLR 0 505 444 245 195 57 98 chr5 275166 275289 -199354861 - MLT1D LTR MaLR -293 212 95 222 275 71 58 chr5 276690 276833 -199353317 - MIR SINE MIR -67 141 17 1068 178 32 9 chr5 277401 277620 -199352530 - MSTB LTR MaLR 0 426 203 1073 143 56 79 chr5 277985 278066 -199352084 - MSTB LTR MaLR -165 261 180 2251 99 0 10 chr5 278066 278368 -199351782 - AluSx SINE Alu -13 299 1 1073 143 56 79 chr5 278368 278552 -199351598 - MSTB LTR MaLR -246 180 2 384 271 6 41 chr5 280217 280387 -199349763 + (TG)n Simple_repeat Simple_repeat 1 164 0 298 224 40 0 chr5 281167 281243 -199348907 + G-rich Low_complexity Low_complexity 3 81 0 1736 229 53 28 chr5 286346 286875 -199343275 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 286943 287027 -199343123 + L1ME LINE L1 5340 5428 -807 237 274 27 0 chr5 287171 287244 -199342906 + L1ME LINE L1 5451 5525 -714 818 179 87 6 chr5 289054 289227 -199340923 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 290967 291122 -199339028 + MLT1E LTR MaLR 398 576 -17 400 335 103 49 chr5 292361 292906 -199337244 - L1MEc LINE L1 -2833 3549 944 1736 229 53 28 chr5 298040 298569 -199331581 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 298637 298721 -199331429 + L1ME LINE L1 5271 5359 -807 237 274 27 0 chr5 298865 298938 -199331212 + L1ME LINE L1 5382 5456 -706 818 179 87 6 chr5 300752 300925 -199329225 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 302816 302971 -199327179 + MLT1E LTR MaLR 398 576 -17 182 244 0 26 chr5 306554 306632 -199323518 + (CATA)n Simple_repeat Simple_repeat 3 78 0 2138 129 3 0 chr5 307137 307448 -199322702 - AluSx SINE Alu 0 312 1 397 279 41 0 chr5 307859 308006 -199322144 + MSTD LTR MaLR 1 153 -243 908 192 60 34 chr5 308147 308381 -199321769 + MSTD LTR MaLR 157 396 0 1269 123 5 0 chr5 308905 309092 -199321058 + AluSg/x SINE Alu 124 311 -1 475 254 58 5 chr5 309100 309289 -199320861 + L1M4 LINE L1 5132 5330 -816 343 288 136 30 chr5 314797 315033 -199315117 + L1M4 LINE L1 2 262 -6280 2407 276 83 17 chr5 315102 315631 -199314519 + L1M4 LINE L1 3754 4247 -2397 1627 168 24 30 chr5 315631 315929 -199314221 - AluJo SINE Alu -16 296 1 2407 276 83 17 chr5 315929 316386 -199313764 + L1M4 LINE L1 4247 4805 -1839 760 199 39 57 chr5 316421 316746 -199313404 + MLT1B LTR MaLR 21 337 -130 310 297 119 0 chr5 316965 317083 -199313067 + MER58B DNA MER1_type 210 341 0 2070 131 0 0 chr5 320392 320689 -199309461 + AluSx SINE Alu 1 297 -15 266 298 92 0 chr5 321297 321428 -199308722 - MIR SINE MIR -10 252 110 219 231 87 10 chr5 321865 321969 -199308181 - MIR SINE MIR -132 130 19 337 318 67 6 chr5 322622 322768 -199307382 - MIR SINE MIR -4 258 105 2146 175 107 5 chr5 323569 324009 -199306141 + MER31A LTR ERV1 1 485 0 1142 144 0 0 chr5 324575 324748 -199305402 - AluSg/x SINE Alu -6 304 132 677 87 77 29 chr5 324966 325070 -199305080 - AluSq/x SINE Alu -204 109 1 621 255 84 56 chr5 325109 325466 -199304684 + L1MDa LINE L1 20 386 -6154 196 77 51 0 chr5 325503 325542 -199304608 + (CA)n Simple_repeat Simple_repeat 1 41 0 333 0 0 0 chr5 325633 325670 -199304480 + (CA)n Simple_repeat Simple_repeat 1 37 0 1703 232 92 20 chr5 325866 327036 -199303114 + L1MDa LINE L1 1014 2098 -4442 2116 115 13 0 chr5 327036 327340 -199302810 + AluSq SINE Alu 3 310 -3 1703 232 92 20 chr5 327340 327806 -199302344 + L1MDa LINE L1 2098 3290 -3250 1094 74 0 4 chr5 327806 328021 -199302129 + AluY SINE Alu 1 302 -9 1143 223 67 5 chr5 328023 328413 -199301737 + L1MDa LINE L1 3282 3695 -2845 2027 191 57 17 chr5 328418 328798 -199301352 + LTR26 LTR ERV1 9 452 -151 2186 86 17 7 chr5 328798 329088 -199301062 + AluSx SINE Alu 1 293 -19 2027 191 57 17 chr5 329088 329247 -199300903 + LTR26 LTR ERV1 452 603 0 456 332 58 8 chr5 329260 329640 -199300510 + L1MDa LINE L1 3715 4113 -2427 635 320 59 69 chr5 330267 330658 -199299492 - L1MDa LINE L1 -4554 1986 1600 289 114 0 0 chr5 330660 330704 -199299446 + MSTA LTR MaLR 376 419 -9 1161 157 19 0 chr5 330713 330929 -199299221 + MSTA-int LTR MaLR 1 220 -1431 1621 144 114 74 chr5 330929 331360 -199298790 + LTR7 LTR ERV1 1 448 -2 15176 113 24 22 chr5 331362 334649 -199295501 + HERVH LTR ERV1 1 2987 -4726 715 182 20 0 chr5 334643 334791 -199295359 + HERVH LTR ERV1 3140 3290 -4423 * 3028 116 6 2 chr5 334790 335282 -199294868 + HERVH LTR ERV1 3500 3993 -3720 1470 123 4 48 chr5 335284 335552 -199294598 + HERVH LTR ERV1 4488 4743 -2970 1177 101 28 11 chr5 385558 385736 -199244414 + L1PA10 LINE L1 5978 6158 -10 2180 101 0 3 chr5 385791 386088 -199244062 + AluSg SINE Alu 1 296 -14 753 258 122 7 chr5 386304 386575 -199243575 + L1ME3A LINE L1 5584 5885 -285 205 178 0 0 chr5 386685 386730 -199243420 + A-rich Low_complexity Low_complexity 1 45 0 1971 101 39 3 chr5 386733 387019 -199243131 - AluSg SINE Alu -14 296 1 194 0 39 0 chr5 387378 387404 -199242746 + (TG)n Simple_repeat Simple_repeat 2 28 0 676 286 65 10 chr5 388067 388361 -199241789 - MER33 DNA MER1_type -8 316 7 653 306 8 35 chr5 389568 389823 -199240327 + L1MEd LINE L1 30 277 -5768 2917 250 82 14 chr5 389883 391276 -199238874 + L1MCb LINE L1 223 1689 -4854 2037 243 23 2 chr5 391276 391749 -199238401 + L1MC3 LINE L1 7302 7784 -1 22 0 0 0 chr5 391755 391777 -199238373 + AT_rich Low_complexity Low_complexity 1 22 0 263 329 0 0 chr5 392046 392125 -199238025 + MIR3 SINE MIR 110 188 -20 354 274 121 0 chr5 393334 393491 -199236659 + LTR52 LTR ERVL 167 342 -79 246 359 23 8 chr5 393729 393857 -199236293 + MIR3 SINE MIR 71 200 -8 556 271 39 0 chr5 396070 396225 -199233925 + MER69 DNA AcHobo 72 232 -2294 287 261 49 28 chr5 397764 397906 -199232244 + L1MEd LINE L1 438 582 -5972 943 292 124 71 chr5 397976 399035 -199231115 + L1MEd LINE L1 715 1846 -4718 2479 37 3 0 chr5 399035 399331 -199230819 - AluY SINE Alu -14 297 1 943 292 124 71 chr5 399331 399605 -199230545 + L1MEd LINE L1 1846 2104 -4460 * 2942 104 21 0 chr5 399604 400327 -199229823 + L1P4 LINE L1 4917 5652 -516 300 263 46 72 chr5 401433 401585 -199228565 - L1M4 LINE L1 -1201 4945 4798 1505 199 3 10 chr5 402307 402608 -199227542 + AluJo SINE Alu 1 299 -13 257 275 22 0 chr5 402728 402819 -199227331 + (CA)n Simple_repeat Simple_repeat 2 94 0 371 332 89 52 chr5 404457 404840 -199225310 + L1ME LINE L1 4622 5018 -1128 735 209 41 0 chr5 405258 405430 -199224720 + L1PBa LINE L1 6 184 -6679 2158 178 10 5 chr5 405805 406193 -199223957 + MLT1B LTR MaLR 1 390 0 1339 258 56 43 chr5 406197 406401 -199223749 - L1ME LINE L1 -487 5679 5479 675 175 0 44 chr5 406401 406538 -199223612 - FLAM_C SINE Alu 0 133 3 1339 258 56 43 chr5 406538 407202 -199222948 - L1ME LINE L1 -687 5479 4796 1367 228 3 10 chr5 407907 408205 -199221945 + AluJo SINE Alu 1 296 -16 300 257 29 0 chr5 408320 408425 -199221725 + (CA)n Simple_repeat Simple_repeat 2 109 0 25 0 0 0 chr5 408491 408516 -199221634 + AT_rich Low_complexity Low_complexity 1 25 0 779 226 17 6 chr5 409287 409464 -199220686 + L1PB1 LINE L1 6 184 -6679 12006 186 30 17 chr5 409467 411469 -199218681 + L1PB1 LINE L1 1109 3083 -3784 5780 54 15 15 chr5 411469 412214 -199217936 - SVA Other Other 0 1386 642 12006 186 30 17 chr5 412214 415036 -199215114 + L1PB1 LINE L1 3083 6030 -837 1721 160 3 3 chr5 415036 415340 -199214810 + AluSx SINE Alu 5 312 0 12006 186 30 17 chr5 415340 416190 -199213960 + L1PB1 LINE L1 6030 6867 0 2057 104 3 29 chr5 416213 416522 -199213628 + AluY SINE Alu 6 306 -5 368 297 191 19 chr5 416720 416976 -199213174 + L1ME LINE L1 5335 5634 -536 1187 207 23 80 chr5 417688 418075 -199212075 - L1ME LINE L1 -489 5660 5296 532 197 145 8 chr5 418088 418205 -199211945 - AluJo SINE Alu -178 134 2 792 180 6 25 chr5 418365 418526 -199211624 + Tigger1 DNA MER2_type 6 163 -2255 * 819 190 113 0 chr5 418507 418702 -199211448 + Tigger1 DNA MER2_type 2202 2418 0 2602 290 78 62 chr5 418704 420461 -199209689 - L1ME LINE L1 -946 5183 3397 1871 162 14 0 chr5 420511 420808 -199209342 + AluSx SINE Alu 1 301 -11 235 214 0 0 chr5 420920 420976 -199209174 + (CA)n Simple_repeat Simple_repeat 1 56 0 182 385 33 16 chr5 423085 423207 -199206943 - L2 LINE L2 -1 3271 3148 364 272 83 67 chr5 423819 424073 -199206077 - L1ME LINE L1 -5188 931 674 304 274 107 20 chr5 426594 426791 -199203359 - MLT1D LTR MaLR -259 246 33 417 298 0 41 chr5 427483 427792 -199202358 + G-rich Low_complexity Low_complexity 1 296 0 206 290 29 0 chr5 428080 428149 -199202001 - MIR SINE MIR -57 151 81 295 263 34 0 chr5 432490 432608 -199197542 + (CAGCC)n Simple_repeat Simple_repeat 1 122 0 196 141 47 12 chr5 432636 432721 -199197429 + (CAGCC)n Simple_repeat Simple_repeat 4 91 0 2185 110 0 0 chr5 435506 435815 -199194335 + AluSx SINE Alu 1 309 -3 361 284 40 57 chr5 440811 440987 -199189163 - L1MEc LINE L1 -1871 4344 4172 1290 255 154 19 chr5 441041 442132 -199188018 - L1MEc LINE L1 -2932 3283 2058 481 205 150 0 chr5 442133 442260 -199187890 - MER3 DNA MER1_type 0 209 64 1055 256 59 20 chr5 442262 442808 -199187342 - L1MEc LINE L1 -5170 1226 660 279 299 52 0 chr5 442889 442986 -199187164 + MER58B DNA MER1_type 234 335 -6 1640 159 26 16 chr5 445547 445855 -199184295 - AluJo SINE Alu -1 311 1 1983 126 161 34 chr5 449012 449344 -199180806 + MSTA LTR MaLR 1 389 -39 2218 81 0 3 chr5 449344 449648 -199180502 + AluSq SINE Alu 1 303 0 1983 126 161 34 chr5 449648 449694 -199180456 + MSTA LTR MaLR 389 428 0 9946 134 9 40 chr5 449696 451324 -199178826 + MSTA-int LTR MaLR 3 1580 0 1132 152 140 16 chr5 451324 451581 -199178569 + MSTA LTR MaLR 1 289 -139 341 336 35 0 chr5 452029 452172 -199177978 - MER34 LTR ERV1 -39 503 356 1283 189 261 3 chr5 452176 452552 -199177598 + MER101 LTR ERV1 1 473 -1 461 235 53 8 chr5 452612 452744 -199177406 - MER34 LTR ERV1 -285 257 120 1751 148 195 11 chr5 454344 454703 -199175447 - MSTA LTR MaLR 0 428 4 8648 130 18 52 chr5 454711 455918 -199174232 - MSTA-int LTR MaLR -5 1575 436 1899 145 9 28 chr5 455918 456236 -199173914 + AluSx SINE Alu 1 312 0 8648 130 18 52 chr5 456236 456656 -199173494 - MSTA-int LTR MaLR -1144 436 3 1676 154 222 3 chr5 456658 457009 -199173141 - MSTA LTR MaLR 0 428 1 2026 119 7 0 chr5 458960 459254 -199170896 + AluSx SINE Alu 1 296 -16 424 337 137 4 chr5 459729 459978 -199170172 - L1M4 LINE L1 -3063 3083 2802 229 319 36 0 chr5 459980 460118 -199170032 - L1MC4 LINE L1 -937 7105 6963 429 180 79 29 chr5 460190 460329 -199169821 - L1ME3A LINE L1 -5 6165 6020 831 227 122 18 chr5 460356 460691 -199169459 - MLT1B LTR MaLR 0 390 21 356 114 102 24 chr5 460946 461112 -199169038 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 394 173 48 30 chr5 461017 461185 -199168965 + (CACAA)n Simple_repeat Simple_repeat 1 171 0 * 428 139 32 86 chr5 461061 461292 -199168858 + (CACAC)n Simple_repeat Simple_repeat 1 218 0 241 120 48 60 chr5 461402 461569 -199168581 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 229 134 79 8 chr5 461607 461734 -199168416 + (CA)n Simple_repeat Simple_repeat 1 136 0 711 264 58 55 chr5 465148 465496 -199164654 - MLT1A1 LTR MaLR -1 364 16 325 291 28 22 chr5 465546 465725 -199164425 + (CA)n Simple_repeat Simple_repeat 1 180 0 251 213 8 63 chr5 465666 465793 -199164357 + C-rich Low_complexity Low_complexity 3 122 0 * 517 199 140 23 chr5 467272 467443 -199162707 - MSTB2 LTR MaLR -13 444 229 21 36 0 0 chr5 469059 469087 -199161063 + AT_rich Low_complexity Low_complexity 1 28 0 403 359 122 17 chr5 470830 471067 -199159083 + L1MEc LINE L1 848 1109 -5454 7613 140 45 44 chr5 471075 472593 -199157557 + MSTA-int LTR MaLR 61 1580 0 2003 150 145 18 chr5 472593 472973 -199157177 + MSTA LTR MaLR 1 428 0 761 247 148 3 chr5 473187 473470 -199156680 + MER68 LTR ERV1 164 487 -75 953 255 116 23 chr5 473589 473760 -199156390 - MER21B LTR ERV1 -191 672 518 4829 176 39 14 chr5 473760 474641 -199155509 + MER4D LTR ERV1 1 903 0 953 255 116 23 chr5 474641 474857 -199155293 - MER21B LTR ERV1 -345 518 249 535 208 69 0 chr5 474857 474987 -199155163 - MER21B LTR ERV1 -705 158 20 3524 153 27 73 chr5 477312 477549 -199152601 + LTR39 LTR ERV1 16 262 -521 1955 129 0 7 chr5 477549 477836 -199152314 + AluSx SINE Alu 28 312 0 3524 153 27 73 chr5 477836 478403 -199151747 + LTR39 LTR ERV1 262 783 0 820 170 78 0 chr5 478747 478900 -199151250 - AluJb SINE Alu -12 300 136 426 283 104 0 chr5 478901 479152 -199150998 - MER33 DNA MER1_type -44 280 4 486 319 76 34 chr5 479217 479480 -199150670 + L1MEc LINE L1 1040 1313 -5250 288 281 102 15 chr5 479557 479760 -199150390 + L1MEc LINE L1 1271 1592 -4790 502 307 49 0 chr5 479776 479939 -199150211 - MER58C DNA MER1_type -18 197 27 2275 81 3 3 chr5 479989 480286 -199149864 - AluY SINE Alu -14 297 1 391 309 42 13 chr5 480325 480561 -199149589 + L1MEc LINE L1 1731 1973 -4590 1086 186 85 80 chr5 482322 482699 -199147451 + MLT1B LTR MaLR 1 379 -11 380 217 46 53 chr5 483514 483666 -199146484 - MER20 DNA MER1_type -63 156 6 360 228 22 11 chr5 486739 486831 -199143319 + L1MC4a LINE L1 6678 6770 -1038 418 322 65 0 chr5 487869 488068 -199142082 + Charlie5 DNA MER1_type 2366 2577 -35 239 310 100 0 chr5 490233 490333 -199139817 + Tigger5 DNA MER2_type 98 207 -2116 879 141 49 22 chr5 494669 494854 -199135296 + AluJo SINE Alu 115 304 -8 496 216 105 26 chr5 495422 495575 -199134575 - MER58C DNA MER1_type -3 212 48 200 35 35 0 chr5 496327 496356 -199133794 + (TTC)n Simple_repeat Simple_repeat 2 31 0 25 31 0 0 chr5 497297 497329 -199132821 + GC_rich Low_complexity Low_complexity 1 32 0 524 336 66 20 chr5 499087 499331 -199130819 - MIR SINE MIR 0 262 8 242 299 26 0 chr5 499883 499960 -199130190 - L2 LINE L2 0 3313 3235 250 288 38 23 chr5 500468 500600 -199129550 + L1M1 LINE L1 5695 5828 -476 1459 194 13 22 chr5 500671 500985 -199129165 + AluJo SINE Alu 1 311 -1 2244 78 6 34 chr5 505053 505374 -199124776 - AluSx SINE Alu 0 312 1 546 147 69 17 chr5 505417 505533 -199124617 - Tigger7 DNA MER2_type -21 2470 2349 192 40 0 0 chr5 505634 505659 -199124491 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 8641 38 13 0 chr5 506037 507031 -199123119 - LTR13 LTR ERVK 0 1007 1 375 250 109 26 chr5 507768 507937 -199122213 - L1MEc LINE L1 -3309 2906 2723 1769 316 88 28 chr5 507988 509222 -199120928 - L1MEc LINE L1 -5056 1340 32 1252 167 115 15 chr5 509390 509659 -199120491 + AluJb SINE Alu 7 302 -10 2379 69 0 13 chr5 512128 512433 -199117717 + AluY SINE Alu 1 301 -10 3819 103 2 6 chr5 512987 513500 -199116650 - MER9 LTR ERVK 0 511 1 245 347 0 49 chr5 514520 514664 -199115486 - L2 LINE L2 -52 3261 3125 2448 53 0 0 chr5 514741 515042 -199115108 + AluY SINE Alu 1 301 -10 2014 129 7 3 chr5 516803 517105 -199113045 - AluSx SINE Alu -7 305 3 180 167 0 71 chr5 517503 517545 -199112605 + MIR SINE MIR 34 72 -136 201 74 0 0 chr5 518172 518199 -199111951 + (TG)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr5 521315 521338 -199108812 + AT_rich Low_complexity Low_complexity 1 23 0 3499 57 16 11 chr5 522028 522470 -199107680 - MLT2A1 LTR ERVL 0 444 1 319 296 45 62 chr5 523224 523400 -199106750 - L1M4 LINE L1 -1871 4275 4103 530 290 163 23 chr5 523420 523727 -199106423 - L1M4 LINE L1 -2885 3261 2912 1988 126 161 34 chr5 524377 524709 -199105441 + MSTA LTR MaLR 1 389 -39 2192 81 0 3 chr5 524709 525013 -199105137 + AluSq SINE Alu 1 303 0 1988 126 161 34 chr5 525013 525059 -199105091 + MSTA LTR MaLR 389 428 0 9889 133 9 41 chr5 525061 526691 -199103459 + MSTA-int LTR MaLR 3 1580 0 753 123 227 7 chr5 526691 526845 -199103305 + MSTA LTR MaLR 1 188 -240 196 141 47 12 chr5 528401 528486 -199101664 + (GGCTG)n Simple_repeat Simple_repeat 4 91 0 295 263 34 0 chr5 528514 528632 -199101518 + (GGCTG)n Simple_repeat Simple_repeat 1 122 0 2115 118 0 3 chr5 528998 529311 -199100839 + AluSx SINE Alu 1 312 0 2864 176 19 30 chr5 529311 529878 -199100272 + LTR39 LTR ERV1 223 783 0 862 170 78 0 chr5 530222 530375 -199099775 - AluJb SINE Alu -12 300 136 469 283 104 0 chr5 530376 530627 -199099523 - MER33 DNA MER1_type -44 280 4 309 300 80 33 chr5 530692 530842 -199099308 + L1MEc LINE L1 873 1029 -5367 304 212 153 0 chr5 531260 531345 -199098805 - L2 LINE L2 -3 3269 3172 693 194 0 0 chr5 531956 532116 -199098034 + (TG)n Simple_repeat Simple_repeat 1 160 0 513 244 0 0 chr5 533135 533295 -199096855 + (TG)n Simple_repeat Simple_repeat 1 160 0 2372 74 0 0 chr5 533941 534240 -199095910 - AluY SINE Alu -12 299 1 290 234 76 10 chr5 534349 534528 -199095622 - MSTC LTR MaLR -208 188 1 388 121 22 22 chr5 534582 534673 -199095477 + (TCTCTG)n Simple_repeat Simple_repeat 2 92 0 267 237 36 5 chr5 534673 534892 -199095258 - Harlequin LTR ERV1 -5805 1091 866 359 174 27 27 chr5 534896 535045 -199095105 + (TCTCTG)n Simple_repeat Simple_repeat 2 150 0 550 326 23 19 chr5 535070 535328 -199094822 - L1M4 LINE L1 -2010 4136 3878 183 243 0 0 chr5 535427 535464 -199094686 + MIR SINE MIR 108 144 -118 184 176 0 0 chr5 538644 538678 -199091472 + MIR SINE MIR 109 142 -120 413 214 200 39 chr5 540568 540853 -199089297 - MLT1F1 LTR MaLR -93 474 144 399 283 53 23 chr5 541072 541362 -199088788 - MLT1F1 LTR MaLR -230 337 27 239 374 52 7 chr5 544743 544898 -199085252 - MIR SINE MIR -2 260 99 2367 296 96 9 chr5 545237 545800 -199084350 - L1MC4a LINE L1 0 7808 7295 1458 187 8 0 chr5 545800 546067 -199084083 - AluJb SINE Alu -4 308 40 2367 296 96 9 chr5 546067 546568 -199083582 - L1MC4a LINE L1 -513 7295 6652 24 0 0 0 chr5 546599 546623 -199083527 + AT_rich Low_complexity Low_complexity 1 24 0 338 362 83 24 chr5 546979 547402 -199082748 + L1MEd LINE L1 499 946 -5173 415 301 112 56 chr5 547478 547892 -199082258 + L1MEd LINE L1 960 1581 -909 366 255 13 27 chr5 547892 548041 -199082109 + L1MA10 LINE L1 6188 6334 0 366 394 5 23 chr5 548045 548240 -199081910 + L1MDb LINE L1 1194 1394 -5002 544 373 106 32 chr5 548293 548698 -199081452 + L1MDb LINE L1 1561 1995 -4592 997 314 134 23 chr5 549117 549954 -199080196 + L1MDb LINE L1 2402 3411 -2995 2415 70 0 0 chr5 549954 550252 -199079898 + AluY SINE Alu 1 298 -13 997 314 134 23 chr5 550252 550599 -199079551 + L1MDb LINE L1 3411 3718 -2688 * 4255 175 12 3 chr5 550593 551491 -199078659 + L1PA14 LINE L1 4474 5379 -767 2648 62 3 0 chr5 551471 551845 -199078305 + L1PA8 LINE L1 5797 6171 -1 * 5309 95 2 5 chr5 551841 552653 -199077497 + L1PA14 LINE L1 5352 6161 0 1378 284 123 26 chr5 552691 552744 -199077406 + L1MDb LINE L1 3697 3743 -2663 1998 125 0 7 chr5 552744 553047 -199077103 + AluSc SINE Alu 1 301 0 1378 284 123 26 chr5 553047 553837 -199076313 + L1MDb LINE L1 3743 4623 -1783 1671 212 73 9 chr5 553855 553962 -199076188 + L1M3 LINE L1 5363 5462 -721 252 0 0 0 chr5 553962 553990 -199076160 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1671 212 73 9 chr5 553990 554306 -199075844 + L1M3 LINE L1 5462 5813 -370 253 286 0 0 chr5 554308 554371 -199075779 + L1ME LINE L1 5748 5810 -354 256 286 0 0 chr5 554376 554439 -199075711 + L1ME LINE L1 5748 5810 -354 267 286 0 0 chr5 554512 554575 -199075575 + L1ME LINE L1 5748 5810 -354 248 302 0 0 chr5 554580 554643 -199075507 + L1ME LINE L1 5745 5807 -359 289 242 0 0 chr5 554648 554714 -199075436 + L1M3 LINE L1 5748 5813 -370 291 242 0 0 chr5 554716 554782 -199075368 + L1M2 LINE L1 5748 5813 -478 266 254 0 0 chr5 554784 554847 -199075303 + L1M4 LINE L1 5748 5810 -368 230 302 0 0 chr5 554852 554915 -199075235 + L1ME LINE L1 5748 5810 -354 280 258 0 0 chr5 554920 554986 -199075164 + L1M2 LINE L1 5748 5813 -478 267 286 0 0 chr5 554988 555051 -199075099 + L1ME LINE L1 5745 5807 -359 254 286 0 0 chr5 555124 555187 -199074963 + L1ME LINE L1 5748 5810 -354 254 286 0 0 chr5 555192 555255 -199074895 + L1ME LINE L1 5748 5810 -354 254 286 0 0 chr5 555260 555323 -199074827 + L1ME LINE L1 5748 5810 -354 271 270 0 0 chr5 555328 555391 -199074759 + L1ME LINE L1 5748 5810 -354 2217 189 33 2 chr5 555396 555819 -199074331 + L1MB3 LINE L1 5748 6183 0 2202 256 133 5 chr5 556987 557734 -199072416 - L1MA4 LINE L1 0 6300 5459 672 200 0 0 chr5 558321 558481 -199071669 + (CA)n Simple_repeat Simple_repeat 1 160 0 313 212 153 0 chr5 559092 559177 -199070973 + L2 LINE L2 3172 3269 -3 842 55 47 12 chr5 562906 563250 -199066900 + (TG)n Simple_repeat Simple_repeat 1 356 0 363 334 68 50 chr5 563317 563681 -199066469 - L1ME LINE L1 -5011 1059 688 603 310 120 24 chr5 563999 564658 -199065492 + L1ME3A LINE L1 1231 1952 -4655 485 332 61 56 chr5 564712 565223 -199064927 + L1M2 LINE L1 1736 2243 -4605 3747 108 8 4 chr5 565223 565732 -199064418 - MER9 LTR ERVK 0 511 1 485 332 61 56 chr5 565732 565961 -199064189 + L1M2 LINE L1 2243 3497 -3351 1678 42 0 0 chr5 565961 566175 -199063975 - LTR14B LTR ERVK -394 214 1 912 283 80 11 chr5 566179 566618 -199063532 + L1M2 LINE L1 3980 4448 -2400 1584 194 8 8 chr5 566628 567005 -199063145 + L1M2 LINE L1 4972 5348 -1500 714 127 22 0 chr5 567003 567137 -199063013 - L1 LINE L1 -1369 4777 4641 * 447 184 0 0 chr5 567145 567232 -199062918 + GA-rich Low_complexity Low_complexity 1 87 0 302 338 62 14 chr5 567232 567377 -199062773 + L1ME3A LINE L1 2226 2377 -4049 616 232 90 0 chr5 567386 567541 -199062609 - MER93b LTR ERV1 -203 170 2 1139 306 117 9 chr5 567592 568155 -199061995 + L1ME3A LINE L1 5539 6162 -284 25 31 0 0 chr5 568339 568371 -199061779 + AT_rich Low_complexity Low_complexity 1 32 0 2147 103 3 10 chr5 568374 568507 -199061643 + AluY SINE Alu 1 133 -178 2070 130 0 16 chr5 568507 568822 -199061328 + AluSg SINE Alu 1 310 0 2147 103 3 10 chr5 568822 568989 -199061161 + AluY SINE Alu 133 299 -12 674 252 34 17 chr5 569936 570174 -199059976 + L1MCa LINE L1 2640 2881 -3545 1188 54 0 0 chr5 570179 570326 -199059824 + AluY SINE Alu 158 304 -7 2223 77 0 13 chr5 570400 570698 -199059452 - AluY SINE Alu -17 294 1 26 0 0 0 chr5 571637 571663 -199058487 + AT_rich Low_complexity Low_complexity 1 26 0 2501 46 10 0 chr5 572506 572809 -199057341 + AluY SINE Alu 1 306 -5 285 191 38 30 chr5 573380 573511 -199056639 + GA-rich Low_complexity Low_complexity 5 136 0 595 171 26 0 chr5 573623 573740 -199056410 - MER45A DNA AcHobo 0 178 59 243 293 0 13 chr5 573819 573894 -199056256 + (TG)n Simple_repeat Simple_repeat 1 74 0 2012 136 0 7 chr5 575274 575583 -199054567 + AluSx SINE Alu 1 307 -5 607 356 99 55 chr5 575610 576123 -199054027 + L1ME4a LINE L1 5304 5846 -275 2526 227 94 21 chr5 576123 576796 -199053354 + MER72 LTR ERV1 1 722 0 607 356 99 55 chr5 576796 576860 -199053290 + L1ME4a LINE L1 5846 5906 -215 259 221 96 19 chr5 576887 576991 -199053159 + L1ME4a LINE L1 6009 6120 -1 187 114 45 0 chr5 577549 577593 -199052557 + GA-rich Low_complexity Low_complexity 3 48 0 338 303 9 9 chr5 579193 579302 -199050848 + Charlie7 DNA MER1_type 335 443 -2169 2031 98 7 11 chr5 580482 580794 -199049356 + AluSx SINE Alu 1 311 0 2101 87 6 81 chr5 581982 582317 -199047833 + AluSx SINE Alu 1 310 -2 336 24 0 0 chr5 583591 583632 -199046518 + (TG)n Simple_repeat Simple_repeat 1 41 0 23 0 0 0 chr5 584280 584303 -199045847 + GC_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr5 584338 584387 -199045763 + GC_rich Low_complexity Low_complexity 1 49 0 238 161 16 65 chr5 585929 585991 -199044159 + L1MB8 LINE L1 6120 6178 0 24 32 0 0 chr5 588119 588150 -199042000 + GC_rich Low_complexity Low_complexity 1 31 0 22 106 0 0 chr5 588214 588299 -199041851 + GC_rich Low_complexity Low_complexity 1 85 0 21 36 0 0 chr5 588352 588380 -199041770 + GC_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 588404 588435 -199041715 + GC_rich Low_complexity Low_complexity 1 31 0 192 40 0 0 chr5 588478 588503 -199041647 + (CGGG)n Simple_repeat Simple_repeat 2 26 0 27 29 0 0 chr5 588611 588645 -199041505 + GC_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 597395 597416 -199032734 + AT_rich Low_complexity Low_complexity 1 21 0 205 330 29 10 chr5 597707 597810 -199032340 + (CATA)n Simple_repeat Simple_repeat 3 107 0 * 215 314 0 14 chr5 597742 597812 -199032338 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 566 220 6 12 chr5 600443 601088 -199029062 + (CTCA)n Simple_repeat Simple_repeat 1 641 0 466 241 6 6 chr5 601452 601782 -199028368 + (CTCA)n Simple_repeat Simple_repeat 1 330 0 206 231 15 0 chr5 601814 601879 -199028271 + (CTCA)n Simple_repeat Simple_repeat 2 67 0 263 245 11 0 chr5 601981 602075 -199028075 + (TTCA)n Simple_repeat Simple_repeat 1 95 0 1990 156 38 26 chr5 602668 602903 -199027247 - MSTB LTR MaLR 0 426 182 2166 139 18 0 chr5 602903 603234 -199026916 - MER1B DNA MER1_type 0 337 1 1990 156 38 26 chr5 603234 603415 -199026735 - MSTB LTR MaLR -244 182 5 501 183 26 0 chr5 603406 603521 -199026629 - MSTB LTR MaLR -304 122 5 * 501 183 26 0 chr5 603512 603627 -199026523 - MSTB LTR MaLR -304 122 5 252 149 60 0 chr5 603618 603685 -199026465 - MSTB2 LTR MaLR -319 138 68 * 2116 115 3 6 chr5 606489 606802 -199023348 - AluSx SINE Alu 0 312 1 374 289 66 68 chr5 608044 608480 -199021670 - MLT1D LTR MaLR -3 464 1 567 283 60 92 chr5 608493 608861 -199021289 - MLT1D-int LTR MaLR -15 1356 1001 223 354 12 6 chr5 609897 610061 -199020089 + C-rich Low_complexity Low_complexity 3 167 0 * 272 193 0 86 chr5 609957 610154 -199019996 + CT-rich Low_complexity Low_complexity 1 180 0 * 410 145 0 88 chr5 610015 610380 -199019770 + (CCTCG)n Simple_repeat Simple_repeat 1 332 0 372 270 22 28 chr5 611175 611411 -199018739 + G-rich Low_complexity Low_complexity 1 234 0 444 180 81 12 chr5 613407 613568 -199016582 + (CCCCAG)n Simple_repeat Simple_repeat 6 177 0 765 208 0 0 chr5 614017 614195 -199015955 + (CTCA)n Simple_repeat Simple_repeat 1 178 0 210 315 0 14 chr5 621675 621748 -199008402 + G-rich Low_complexity Low_complexity 4 75 0 47 104 0 0 chr5 624018 624191 -199005959 + GC_rich Low_complexity Low_complexity 1 173 0 1643 98 102 70 chr5 625875 626160 -199003990 - AluSx SINE Alu -15 297 4 240 366 12 6 chr5 632067 632239 -198997911 + (TATG)n Simple_repeat Simple_repeat 1 173 0 * 309 336 0 0 chr5 632164 632277 -198997873 + (TG)n Simple_repeat Simple_repeat 1 113 0 183 42 0 0 chr5 635962 635986 -198994164 + (CACCC)n Simple_repeat Simple_repeat 4 27 0 2111 118 10 0 chr5 837892 838181 -198791969 + AluSx SINE Alu 1 292 -20 2230 104 13 16 chr5 838541 838850 -198791300 + AluSx SINE Alu 1 308 -4 242 282 42 0 chr5 839330 839401 -198790749 + MIR SINE MIR 29 102 -160 855 275 84 10 chr5 839439 839910 -198790240 + MER68 LTR ERV1 12 557 -5 213 303 15 0 chr5 839917 839983 -198790167 + MIR SINE MIR 147 213 -49 195 254 167 53 chr5 843636 843750 -198786400 + MIR3 SINE MIR 3 129 -79 2297 215 120 38 chr5 843753 844701 -198785449 + L1MC/D LINE L1 16 1360 -5180 926 297 129 11 chr5 844984 845425 -198784725 + L1MC/D LINE L1 4106 4598 -1942 1315 242 33 41 chr5 845438 845925 -198784225 + L1MC/D LINE L1 5375 5861 -743 1676 178 3 18 chr5 848436 848722 -198781428 - AluJo SINE Alu -30 282 1 812 218 35 44 chr5 848742 848971 -198781179 - AluJo SINE Alu -1 311 85 517 233 62 11 chr5 848971 849147 -198781003 - AluJb SINE Alu -62 250 66 4662 147 14 1 chr5 849505 850274 -198779876 + Tigger1 DNA MER2_type 75 853 -1565 1024 147 21 16 chr5 854182 854372 -198775778 + L1PB4 LINE L1 5958 6148 -8 6833 134 36 8 chr5 859078 860275 -198769875 + Tigger1 DNA MER2_type 971 2201 -217 3880 171 28 52 chr5 860582 861499 -198768651 - L1MC1 LINE L1 0 6333 5439 1810 129 0 80 chr5 862153 862311 -198767839 + AluSx SINE Alu 1 121 -191 2583 82 0 9 chr5 862311 862627 -198767523 + AluSp SINE Alu 1 313 0 1810 129 0 80 chr5 862627 862794 -198767356 + AluSx SINE Alu 121 300 -12 355 203 37 0 chr5 862818 862903 -198767247 + AluJ/FLAM SINE Alu 11 88 -214 2047 119 3 52 chr5 863085 863413 -198766737 - AluSx SINE Alu 0 312 1 1024 106 0 28 chr5 863418 863560 -198766590 - FRAM SINE Alu -15 161 24 1288 119 0 11 chr5 863712 863897 -198766253 - AluSg/x SINE Alu -9 301 119 964 117 37 19 chr5 863899 864061 -198766089 - AluSg/x SINE Alu -23 287 123 328 287 57 38 chr5 864084 864241 -198765909 + L1MDa LINE L1 2020 2179 -4361 192 162 0 147 chr5 867209 867277 -198762873 + MIR SINE MIR 161 218 -44 746 248 221 34 chr5 867361 867858 -198762292 - MLT1G LTR MaLR 0 590 1 2009 120 39 0 chr5 868022 868305 -198761845 + AluSx SINE Alu 1 294 -18 581 235 6 0 chr5 868566 868745 -198761405 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 267 152 0 0 chr5 868768 868814 -198761336 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 2343 98 0 3 chr5 868817 869114 -198761036 - AluSx SINE Alu -16 296 1 2063 96 0 14 chr5 869168 869448 -198760702 - AluSx SINE Alu -11 301 26 1280 175 62 15 chr5 871476 871781 -198758369 - AluSx SINE Alu 0 329 12 526 125 0 153 chr5 875631 875775 -198754375 - AluJb SINE Alu -189 123 2 1838 122 15 4 chr5 876195 876466 -198753684 - AluSx SINE Alu 0 312 39 1731 171 30 36 chr5 878485 878930 -198751220 + L1M4 LINE L1 5333 5775 -409 226 244 110 0 chr5 878973 879055 -198751095 - MIR SINE MIR -1 261 171 299 231 51 13 chr5 879267 879345 -198750805 - MLT1E3 LTR MaLR -293 237 157 556 122 11 22 chr5 881207 881320 -198748830 + AluSg/x SINE Alu 199 310 0 1978 148 0 10 chr5 881329 881639 -198748511 + AluSx SINE Alu 4 310 -2 271 250 16 0 chr5 881816 881880 -198748270 - Alu SINE Alu -22 279 215 23 0 0 0 chr5 882624 882647 -198747503 + GC_rich Low_complexity Low_complexity 1 23 0 366 23 0 0 chr5 883169 883212 -198746938 + (GAA)n Simple_repeat Simple_repeat 2 44 0 214 192 0 19 chr5 887611 887663 -198742487 + A-rich Low_complexity Low_complexity 3 53 0 255 310 18 9 chr5 887960 888073 -198742077 + GA-rich Low_complexity Low_complexity 3 116 0 472 190 100 0 chr5 888243 888343 -198741807 - MLT1E3 LTR MaLR -472 152 43 1213 203 132 33 chr5 888343 888782 -198741368 - MER66A LTR ERV1 0 478 97 1323 152 64 0 chr5 888861 889125 -198741025 - MER66A-int LTR ERV1 0 6676 6396 1583 128 48 93 chr5 889126 889523 -198740627 - MER66-int LTR ERV1 -1740 4936 4558 469 226 0 19 chr5 889524 889630 -198740520 - MER4D LTR ERV1 -712 160 57 495 99 165 8 chr5 889642 889763 -198740387 - MER66-int LTR ERV1 -2230 4446 4307 343 263 33 70 chr5 892735 892948 -198737202 - HAL1 LINE L1 -685 1822 1618 444 324 53 18 chr5 893382 893552 -198736598 - HAL1 LINE L1 -1300 1207 1032 1344 126 34 25 chr5 898132 898390 -198731760 - MER1B DNA MER1_type 0 339 119 697 171 13 7 chr5 900081 900239 -198729911 - MER1B DNA MER1_type -168 129 1 21 0 0 0 chr5 901424 901445 -198728705 + AT_rich Low_complexity Low_complexity 1 21 0 2165 105 0 25 chr5 902384 902698 -198727452 - AluSc SINE Alu -3 306 1 2182 114 3 0 chr5 903825 904124 -198726026 - AluSg SINE Alu -10 300 1 502 231 9 0 chr5 905211 905319 -198724831 - LTR55 LTR ERV -321 227 119 332 181 0 58 chr5 907672 907827 -198722323 + (CTGGGG)n Simple_repeat Simple_repeat 3 148 0 446 238 0 48 chr5 907857 908004 -198722146 + (CTGGGG)n Simple_repeat Simple_repeat 2 141 0 884 263 30 25 chr5 908005 908389 -198721761 - LTR24 LTR ERV1 0 532 186 1497 210 146 7 chr5 909864 910274 -198719876 - LTR24 LTR ERV1 0 467 1 1054 268 55 29 chr5 910494 910949 -198719201 - L1ME LINE L1 -2897 3183 2717 1592 196 76 10 chr5 910958 911355 -198718795 - MER50 LTR ERV1 0 734 312 552 253 179 16 chr5 911524 911832 -198718318 - MER50 LTR ERV1 -367 367 10 649 290 60 17 chr5 911871 912223 -198717927 - L1ME LINE L1 -3426 2654 2288 1051 215 119 10 chr5 912223 912534 -198717616 + MER2 DNA MER2_type 1 345 0 587 252 64 36 chr5 912541 912791 -198717359 - L1ME LINE L1 -3944 2317 2061 471 332 158 46 chr5 913166 913770 -198716380 - L1ME LINE L1 -4965 1089 472 553 279 107 32 chr5 914411 914775 -198715375 - HAL1 LINE L1 -367 2140 1720 1396 288 73 67 chr5 915997 916946 -198713204 + L1MEc LINE L1 29 986 -5410 2152 64 8 0 chr5 916946 917212 -198712938 + AluY SINE Alu 22 289 -22 1396 288 73 67 chr5 917212 917375 -198712775 + L1MEc LINE L1 986 1147 -5249 1077 191 70 8 chr5 917376 917414 -198712736 - MLT2B3 LTR ERVL 0 554 520 702 93 0 0 chr5 917414 917522 -198712628 + (TAGA)n Simple_repeat Simple_repeat 2 109 0 1077 191 70 8 chr5 917522 917740 -198712410 - MLT2B3 LTR ERVL -34 520 282 781 296 70 0 chr5 917763 918077 -198712073 + L1MEc LINE L1 1408 1743 -4653 340 58 0 19 chr5 918149 918201 -198711949 + MER75 DNA T2_type 464 514 0 724 182 0 54 chr5 918219 918367 -198711783 + AluJo SINE Alu 1 140 -172 598 251 166 19 chr5 918368 918675 -198711475 + L1MEc LINE L1 1863 2214 -4182 331 261 11 0 chr5 918783 918875 -198711275 + L1MA10 LINE L1 6233 6325 -9 240 179 0 36 chr5 923802 923858 -198706292 + (TCTCTG)n Simple_repeat Simple_repeat 4 57 0 431 216 6 0 chr5 923863 924030 -198706120 + CT-rich Low_complexity Low_complexity 1 168 0 268 263 12 0 chr5 926217 926297 -198703853 - MLT1H LTR MaLR -6 543 463 498 225 11 18 chr5 928935 929098 -198701052 - MER58 DNA MER1_type -2188 232 40 3360 204 39 68 chr5 931358 932343 -198697807 - LTR5 LTR ERVK -13 956 1 2111 118 10 0 chr5 936865 937154 -198692996 + AluSx SINE Alu 1 292 -20 2230 104 13 16 chr5 937513 937822 -198692328 + AluSx SINE Alu 1 308 -4 242 282 42 0 chr5 938302 938373 -198691777 + MIR SINE MIR 29 102 -160 877 273 84 10 chr5 938411 938882 -198691268 + MER68 LTR ERV1 12 557 -5 213 303 15 0 chr5 938889 938955 -198691195 + MIR SINE MIR 147 213 -49 195 254 167 53 chr5 942573 942687 -198687463 + MIR3 SINE MIR 3 129 -79 2160 214 124 41 chr5 942690 943638 -198686512 + L1MD1 LINE L1 16 1360 -5180 926 297 129 11 chr5 944390 944831 -198685319 + L1MD1 LINE L1 4106 4598 -1942 1315 242 33 41 chr5 944844 945331 -198684819 + L1MD1 LINE L1 5375 5861 -743 2667 191 35 9 chr5 948335 948915 -198681235 + L1MD1 LINE L1 5824 6418 -218 771 180 36 6 chr5 948928 949095 -198681055 + L1MD1 LINE L1 6465 6636 0 2378 85 0 0 chr5 949446 949740 -198680410 + AluSc SINE Alu 1 294 -15 1504 159 101 7 chr5 950758 951035 -198679115 - AluJb SINE Alu -9 303 1 281 277 76 25 chr5 951168 951287 -198678863 - MIR SINE MIR -50 212 88 186 267 0 56 chr5 951590 951680 -198678470 - L2 LINE L2 -5 3308 3224 1372 78 0 22 chr5 951683 951863 -198678287 + AluSc SINE Alu 134 309 0 617 206 0 0 chr5 951998 952124 -198678026 + MLT2B1 LTR ERVL 1 126 -394 219 231 0 39 chr5 953130 953208 -198676942 + (CGGGG)n Simple_repeat Simple_repeat 2 76 0 2533 64 0 3 chr5 955513 955810 -198674340 - AluY SINE Alu -15 296 1 2161 122 26 0 chr5 957033 957336 -198672814 - AluSx SINE Alu -1 311 1 231 324 37 37 chr5 959772 959908 -198670242 - MIR SINE MIR -10 252 117 427 253 121 22 chr5 960854 961036 -198669114 + MER3 DNA MER1_type 1 200 -9 192 244 44 0 chr5 961784 961829 -198668321 - MIR3 SINE MIR -52 156 110 3965 160 52 33 chr5 961977 962906 -198667244 + L1MA9 LINE L1 5152 6108 -204 797 183 119 29 chr5 963198 963443 -198666707 + L1MA9 LINE L1 6067 6307 -5 22 35 0 0 chr5 963458 963487 -198666663 + AT_rich Low_complexity Low_complexity 1 29 0 2201 121 3 7 chr5 963544 963850 -198666300 + AluSx SINE Alu 1 305 -7 2446 98 0 0 chr5 964479 964785 -198665365 + AluSx SINE Alu 1 306 -6 1759 183 0 32 chr5 965411 965722 -198664428 - AluJb SINE Alu -11 301 1 423 259 208 10 chr5 966048 966245 -198663905 + MIR SINE MIR 17 252 -10 2684 50 0 0 chr5 967343 967646 -198662504 + AluY SINE Alu 5 307 -4 1568 121 62 107 chr5 967678 968034 -198662116 - MER2 DNA MER2_type -5 340 1 361 289 35 0 chr5 968102 968216 -198661934 + L2 LINE L2 3194 3311 -2 2147 129 3 0 chr5 969231 969525 -198660625 - AluSx SINE Alu -17 295 1 1576 151 65 48 chr5 969858 970150 -198660000 - AluJo SINE Alu -15 297 1 404 235 39 0 chr5 971339 971441 -198658709 + L1ME1 LINE L1 5879 5984 -182 371 133 0 0 chr5 971649 971709 -198658441 - AluS SINE Alu -8 292 233 705 172 0 16 chr5 971709 971837 -198658313 - AluJo SINE Alu -152 160 35 2040 137 0 16 chr5 971878 972184 -198657966 + AluJb SINE Alu 1 301 -11 1870 131 31 17 chr5 972484 972775 -198657375 + AluSx SINE Alu 1 295 -17 21 57 0 19 chr5 972946 972976 -198657174 + AT_rich Low_complexity Low_complexity 1 31 -21 2261 115 3 0 chr5 972976 973271 -198656879 - AluSx SINE Alu -16 296 1 21 57 0 19 chr5 973271 973293 -198656857 + AT_rich Low_complexity Low_complexity 31 52 0 2190 180 43 24 chr5 973738 974205 -198655945 - L1PB4 LINE L1 -2 6154 5679 268 276 110 8 chr5 974479 974606 -198655544 - MLT1J LTR MaLR -279 232 93 459 263 51 0 chr5 974694 974812 -198655338 + MER3 DNA MER1_type 8 131 -78 199 298 91 33 chr5 975213 975334 -198654816 - L2 LINE L2 -3 3269 3142 2772 96 123 9 chr5 975397 975854 -198654296 + MER9 LTR ERVK 3 511 0 21229 74 6 3 chr5 975854 979082 -198651068 + HERVK9 LTR ERVK 1 3232 -2684 588 62 12 0 chr5 979073 979154 -198650996 + HERVK9 LTR ERVK 3154 3235 -2681 * 1050 123 0 0 chr5 979150 979305 -198650845 + HERVK9 LTR ERVK 3171 3325 -2591 364 159 0 0 chr5 979370 979439 -198650711 + HERVK9 LTR ERVK 3257 3325 -2591 * 388 167 56 22 chr5 979416 979506 -198650644 + HERVK9 LTR ERVK 3233 3325 -2591 * 402 136 0 0 chr5 979503 979569 -198650581 + HERVK9 LTR ERVK 3256 3321 -2595 372 171 0 0 chr5 979570 979640 -198650510 + HERVK9 LTR ERVK 3256 3325 -2591 * 393 152 0 0 chr5 979637 979703 -198650447 + HERVK9 LTR ERVK 3256 3321 -2595 1093 155 0 0 chr5 979704 979878 -198650272 + HERVK9 LTR ERVK 3256 3429 -2487 * 16454 89 20 0 chr5 979868 982154 -198647996 + HERVK9 LTR ERVK 3304 5634 -282 2033 117 36 6 chr5 982179 982524 -198647626 + HERVK9 LTR ERVK 5635 5916 0 3122 104 89 4 chr5 982525 982995 -198647155 + MER9 LTR ERVK 2 511 0 506 331 74 8 chr5 982996 983253 -198646897 + L1M4 LINE L1 4172 4445 -1701 2198 106 23 3 chr5 986633 986935 -198643215 - AluSx SINE Alu -4 308 1 1518 148 81 4 chr5 986979 987250 -198642900 + AluJb SINE Alu 1 292 -20 304 242 0 30 chr5 987257 987323 -198642827 + HAL1 LINE L1 1100 1163 -1344 1426 178 103 11 chr5 988646 988927 -198641223 - AluJb SINE Alu -5 307 1 1213 171 83 0 chr5 989075 989292 -198640858 - MER46A DNA MER2_type 0 236 2 1502 144 137 39 chr5 990005 990289 -198639861 - AluJo SINE Alu 0 312 1 709 178 89 13 chr5 990411 990568 -198639582 + MER1B DNA MER1_type 1 129 -168 225 57 57 0 chr5 991405 991440 -198638710 + MER1B DNA MER1_type 133 129 -168 276 81 0 0 chr5 991590 991627 -198638523 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 991652 991689 -198638461 + MER1B DNA MER1_type 133 129 -168 226 139 0 0 chr5 991809 991845 -198638305 + MER1B DNA MER1_type 134 129 -168 226 139 0 0 chr5 991873 991909 -198638241 + MER1B DNA MER1_type 134 129 -168 1390 126 38 25 chr5 991981 992238 -198637912 + MER1B DNA MER1_type 119 339 0 397 321 55 18 chr5 996824 996989 -198633161 + HAL1 LINE L1 1037 1207 -1300 448 255 57 6 chr5 997423 997580 -198632570 + HAL1 LINE L1 1618 1782 -725 282 246 5 128 chr5 997658 997861 -198632289 + GA-rich Low_complexity Low_complexity 1 178 0 250 234 16 120 chr5 997827 998019 -198632131 + G-rich Low_complexity Low_complexity 5 176 0 * 380 153 34 117 chr5 997954 998254 -198631896 + GA-rich Low_complexity Low_complexity 1 275 0 384 188 76 168 chr5 998667 999024 -198631126 + LTR56 LTR ERV1 1 324 -121 230 239 30 0 chr5 999079 999146 -198631004 + LTR23 LTR ERV1 353 421 -16 183 100 0 0 chr5 1001749 1001779 -198628371 + (A)n Simple_repeat Simple_repeat 1 30 0 228 250 31 0 chr5 1001841 1001905 -198628245 + L1ME LINE L1 48 113 -5957 2257 110 0 7 chr5 1002097 1002397 -198627753 + AluSc SINE Alu 1 298 -11 1701 187 3 16 chr5 1002411 1002727 -198627423 + AluJb SINE Alu 1 312 0 1681 268 115 30 chr5 1002764 1003330 -198626820 + L1ME LINE L1 282 798 -5282 1894 122 93 34 chr5 1003330 1003684 -198626466 - THE1C LTR MaLR 0 375 1 1681 268 115 30 chr5 1003684 1003890 -198626260 + L1ME LINE L1 798 985 -5095 1673 215 0 0 chr5 1003890 1004202 -198625948 + AluJo SINE Alu 1 312 0 1681 268 115 30 chr5 1004202 1004560 -198625590 + L1ME LINE L1 985 1492 -4588 2716 214 142 1 chr5 1005077 1005891 -198624259 - L1ME1 LINE L1 -5 6161 5222 3480 191 36 3 chr5 1005905 1006619 -198623531 - L1MB3 LINE L1 -39 6144 5407 1792 112 4 27 chr5 1008968 1009228 -198620922 + AluSg SINE Alu 52 305 -5 289 228 21 98 chr5 1009705 1009898 -198620252 + (CA)n Simple_repeat Simple_repeat 2 179 0 342 210 10 115 chr5 1010052 1010252 -198619898 + (CA)n Simple_repeat Simple_repeat 2 180 0 290 279 52 23 chr5 1010316 1010488 -198619662 + (CA)n Simple_repeat Simple_repeat 2 178 0 14907 133 36 11 chr5 1013704 1014267 -198615883 - Tigger1 DNA MER2_type 0 2418 1871 1978 108 4 0 chr5 1014267 1014525 -198615625 - AluSx SINE Alu -15 297 39 14907 133 36 11 chr5 1014525 1016320 -198613830 - Tigger1 DNA MER2_type -547 1871 1 21 0 0 0 chr5 1017171 1017192 -198612958 + AT_rich Low_complexity Low_complexity 1 21 0 2230 112 7 0 chr5 1017377 1017672 -198612478 + AluSx SINE Alu 1 297 -15 235 300 103 25 chr5 1017856 1018099 -198612051 + L1ME LINE L1 2221 2482 -3598 299 160 120 0 chr5 1018312 1018387 -198611763 - L1MEc LINE L1 -4305 2091 2008 913 128 27 0 chr5 1018387 1018536 -198611614 - Tigger1 DNA MER2_type -750 1668 1516 2121 121 0 29 chr5 1018659 1018965 -198611185 - AluJb SINE Alu -15 297 1 428 248 223 34 chr5 1018965 1019110 -198611040 + L1ME LINE L1 2623 2739 -3341 889 77 77 8 chr5 1019110 1019240 -198610910 - MER85 DNA T2_type 0 139 1 428 248 223 34 chr5 1019240 1019300 -198610850 + L1ME LINE L1 2739 2867 -3213 1425 184 10 37 chr5 1019767 1020061 -198610089 + AluJo SINE Alu 1 286 -26 445 296 58 36 chr5 1020614 1020770 -198609380 + L1MEc LINE L1 825 976 -5229 2590 59 0 3 chr5 1020770 1021073 -198609077 + AluY SINE Alu 1 302 -9 445 296 58 36 chr5 1021073 1021400 -198608750 + L1MEc LINE L1 976 1224 -4981 1471 246 131 47 chr5 1021412 1022207 -198607943 + L1MEc LINE L1 1497 2224 -1640 315 0 0 0 chr5 1022207 1022242 -198607908 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2071 114 4 4 chr5 1022244 1022525 -198607625 - AluSx SINE Alu -31 281 1 1471 246 131 47 chr5 1022525 1023162 -198606988 + L1MEc LINE L1 2224 3000 -864 * 8333 182 77 32 chr5 1023155 1024655 -198605495 - L1M4 LINE L1 -2466 3916 2485 2166 99 25 0 chr5 1024655 1024939 -198605211 + AluSx SINE Alu 1 291 -21 8333 182 77 32 chr5 1024939 1026483 -198603667 - L1M4 LINE L1 -3897 2485 1012 3311 147 20 61 chr5 1026483 1027121 -198603029 - LTR9 LTR ERV1 0 612 1 8333 182 77 32 chr5 1027121 1027145 -198603005 - L1M4 LINE L1 -5370 1012 991 414 0 0 0 chr5 1027145 1027191 -198602959 + (TTA)n Simple_repeat Simple_repeat 3 48 0 8333 182 77 32 chr5 1027191 1027529 -198602621 - L1M4 LINE L1 -5391 991 670 4750 123 47 5 chr5 1027529 1028277 -198601873 - MER4E LTR ERV1 0 779 1 8333 182 77 32 chr5 1028277 1028588 -198601562 - L1M4 LINE L1 -5712 670 14 5002 158 56 8 chr5 1028610 1029472 -198600678 + MER4D LTR ERV1 1 903 0 198 71 0 0 chr5 1029872 1029900 -198600250 + (GA)n Simple_repeat Simple_repeat 2 29 0 331 253 65 84 chr5 1030067 1030221 -198599929 + L1M LINE L1 5274 5424 -2384 1917 79 16 4 chr5 1030925 1031179 -198598971 - L1PA6 LINE L1 0 6154 5898 200 204 34 34 chr5 1031314 1031402 -198598748 + GA-rich Low_complexity Low_complexity 1 88 0 384 188 76 168 chr5 1031815 1032172 -198597978 + LTR56 LTR ERV1 1 324 -121 230 239 30 0 chr5 1032227 1032294 -198597856 + LTR23 LTR ERV1 353 421 -16 183 100 0 0 chr5 1034897 1034927 -198595223 + (A)n Simple_repeat Simple_repeat 1 30 0 228 250 31 0 chr5 1034989 1035053 -198595097 + L1ME LINE L1 48 113 -5957 2257 110 0 7 chr5 1035245 1035545 -198594605 + AluSc SINE Alu 1 298 -11 1701 187 3 16 chr5 1035559 1035875 -198594275 + AluJb SINE Alu 1 312 0 1681 268 116 29 chr5 1035912 1036478 -198593672 + L1ME LINE L1 282 798 -5282 1894 122 93 34 chr5 1036478 1036832 -198593318 - THE1C LTR MaLR 0 375 1 1681 268 116 29 chr5 1036832 1037038 -198593112 + L1ME LINE L1 798 985 -5095 1673 215 0 0 chr5 1037038 1037350 -198592800 + AluJo SINE Alu 1 312 0 1681 268 116 29 chr5 1037350 1037700 -198592450 + L1ME LINE L1 985 1486 -4594 2878 204 166 1 chr5 1038224 1039032 -198591118 - L1ME1 LINE L1 -5 6161 5222 7154 196 31 18 chr5 1039046 1039990 -198590160 - L1MB3 LINE L1 -39 6144 5214 1914 176 7 0 chr5 1039990 1040285 -198589865 - AluJo SINE Alu -12 300 4 7154 196 31 18 chr5 1040285 1041858 -198588292 - L1MB3 LINE L1 -969 5214 3591 271 310 3 57 chr5 1042743 1042998 -198587152 + G-rich Low_complexity Low_complexity 1 241 0 306 346 0 13 chr5 1043188 1043347 -198586803 + G-rich Low_complexity Low_complexity 2 158 0 * 357 255 11 69 chr5 1043273 1043533 -198586617 + GA-rich Low_complexity Low_complexity 1 244 0 1418 159 13 4 chr5 1043895 1044127 -198586023 + AluJo SINE Alu 1 234 -78 743 83 19 0 chr5 1045357 1045465 -198584685 + HY1 scRNA scRNA 2 111 -1 881 101 0 25 chr5 1045484 1045603 -198584547 + AluJb SINE Alu 178 293 -19 319 257 47 0 chr5 1046830 1047001 -198583149 + (TG)n Simple_repeat Simple_repeat 1 179 0 266 238 33 26 chr5 1047036 1047187 -198582963 + (TG)n Simple_repeat Simple_repeat 1 152 0 189 0 0 0 chr5 1047820 1047841 -198582309 + (A)n Simple_repeat Simple_repeat 1 21 0 308 274 152 19 chr5 1047923 1048233 -198581917 + MLT1C LTR MaLR 45 395 -72 250 69 0 128 chr5 1048335 1048437 -198581713 + (TGGGGG)n Simple_repeat Simple_repeat 4 92 0 185 50 0 100 chr5 1048484 1048524 -198581626 + (TGGGGG)n Simple_repeat Simple_repeat 3 38 0 220 206 22 54 chr5 1048761 1048945 -198581205 + (CCCG)n Simple_repeat Simple_repeat 2 179 0 * 295 175 16 63 chr5 1048824 1048950 -198581200 + C-rich Low_complexity Low_complexity 5 124 0 253 258 162 0 chr5 1049516 1049683 -198580467 - L2 LINE L2 -253 3060 2867 683 269 126 31 chr5 1050362 1050719 -198579431 + L2 LINE L2 1712 2102 -1212 891 254 61 7 chr5 1050822 1051102 -198579048 - L1MB4 LINE L1 0 6180 5886 6236 217 49 15 chr5 1051103 1053218 -198576932 - L1MB4 LINE L1 -428 5752 3581 509 272 201 10 chr5 1053235 1053529 -198576621 + L2 LINE L2 2107 2456 -858 269 306 31 0 chr5 1053555 1053653 -198576497 - LTR67 LTR ERVL -22 535 435 219 297 16 16 chr5 1054390 1054454 -198575696 + L2 LINE L2 3125 3188 -84 347 297 35 0 chr5 1056313 1056458 -198573692 + G-rich Low_complexity Low_complexity 5 154 0 265 279 154 44 chr5 1057931 1058067 -198572083 - MIR SINE MIR -76 186 36 205 204 19 19 chr5 1058716 1058770 -198571380 + MIR SINE MIR 79 132 -130 217 250 26 53 chr5 1060123 1060199 -198569951 + MIR SINE MIR 189 262 0 834 164 0 0 chr5 1060826 1060966 -198569184 - L1MB5 LINE L1 -12 6162 6023 2456 218 36 14 chr5 1061294 1061927 -198568223 - L1MB5 LINE L1 -110 6064 5418 4653 217 51 38 chr5 1061963 1062325 -198567825 - L1MB5 LINE L1 -1002 5144 4788 2227 86 20 3 chr5 1062325 1062503 -198567647 - AluSc SINE Alu -2 307 121 387 0 0 0 chr5 1062503 1062546 -198567604 + (TG)n Simple_repeat Simple_repeat 2 44 0 2227 86 20 3 chr5 1062546 1062659 -198567491 - AluSc SINE Alu -188 121 11 4653 217 51 38 chr5 1062659 1062770 -198567380 - L1MB5 LINE L1 -1358 4788 4680 2268 106 0 3 chr5 1062770 1063063 -198567087 + AluSg SINE Alu 1 292 -18 297 0 0 0 chr5 1063066 1063099 -198567051 + (TA)n Simple_repeat Simple_repeat 2 34 0 4653 217 51 38 chr5 1063099 1064016 -198566134 - L1MB5 LINE L1 -1467 4679 3731 185 191 234 0 chr5 1064226 1064273 -198565877 + MIR SINE MIR 168 225 -37 192 247 161 25 chr5 1066791 1066872 -198563278 + MIR SINE MIR 168 259 -3 1195 135 0 42 chr5 1066909 1067124 -198563026 - MER75 DNA T2_type -306 208 3 1070 198 74 4 chr5 1067124 1067346 -198562804 + MSTA LTR MaLR 189 428 0 2132 144 52 12 chr5 1068175 1068578 -198561572 - L1MA4 LINE L1 -11 6289 5871 1792 112 4 27 chr5 1073744 1074004 -198556146 + AluSg SINE Alu 52 305 -5 289 228 21 98 chr5 1074481 1074674 -198555476 + (CA)n Simple_repeat Simple_repeat 2 179 0 342 210 10 115 chr5 1074828 1075028 -198555122 + (CA)n Simple_repeat Simple_repeat 2 180 0 269 299 46 17 chr5 1075092 1075266 -198554884 + (CA)n Simple_repeat Simple_repeat 2 180 0 14907 133 36 11 chr5 1078482 1079045 -198551105 - Tigger1 DNA MER2_type 0 2418 1871 1978 108 4 0 chr5 1079045 1079303 -198550847 - AluSx SINE Alu -15 297 39 14907 133 36 11 chr5 1079303 1081098 -198549052 - Tigger1 DNA MER2_type -547 1871 1 21 0 0 0 chr5 1081949 1081970 -198548180 + AT_rich Low_complexity Low_complexity 1 21 0 2230 112 7 0 chr5 1082155 1082450 -198547700 + AluSx SINE Alu 1 297 -15 250 296 103 25 chr5 1082634 1082877 -198547273 + L1M4 LINE L1 2287 2548 -3598 299 160 120 0 chr5 1083090 1083165 -198546985 - L1MEc LINE L1 -4305 2091 2008 913 128 27 0 chr5 1083165 1083314 -198546836 - Tigger1 DNA MER2_type -750 1668 1516 2131 121 0 29 chr5 1083437 1083744 -198546406 - AluJb SINE Alu -14 298 1 428 248 223 34 chr5 1083744 1083889 -198546261 + L1M4 LINE L1 2689 2805 -3341 889 77 77 8 chr5 1083889 1084019 -198546131 - MER85 DNA T2_type 0 139 1 428 248 223 34 chr5 1084019 1084079 -198546071 + L1M4 LINE L1 2805 2933 -3213 1425 184 10 37 chr5 1084546 1084840 -198545310 + AluJo SINE Alu 1 286 -26 445 296 58 36 chr5 1085393 1085549 -198544601 + L1MEc LINE L1 825 976 -5229 2590 59 0 3 chr5 1085549 1085852 -198544298 + AluY SINE Alu 1 302 -9 445 296 58 36 chr5 1085852 1086179 -198543971 + L1MEc LINE L1 976 1224 -4981 1467 249 129 47 chr5 1086191 1086986 -198543164 + L1MEc LINE L1 1497 2225 -1639 315 0 0 0 chr5 1086986 1087021 -198543129 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2071 114 4 4 chr5 1087023 1087304 -198542846 - AluSx SINE Alu -31 281 1 1467 249 129 47 chr5 1087304 1087941 -198542209 + L1MEc LINE L1 2225 3000 -864 * 10352 185 81 34 chr5 1087934 1089433 -198540717 - L1M4 LINE L1 -2466 3916 2489 2166 99 25 0 chr5 1089433 1089717 -198540433 + AluSx SINE Alu 1 291 -21 10352 185 81 34 chr5 1089717 1091261 -198538889 - L1M4 LINE L1 -3893 2489 1019 3311 147 20 61 chr5 1091261 1091899 -198538251 - LTR9 LTR ERV1 0 612 1 10352 185 81 34 chr5 1091899 1091922 -198538228 - L1M4 LINE L1 -5363 1019 999 360 0 0 0 chr5 1091922 1091962 -198538188 + (TTA)n Simple_repeat Simple_repeat 3 42 0 10352 185 81 34 chr5 1091962 1092300 -198537850 - L1M4 LINE L1 -5383 999 678 4750 123 47 5 chr5 1092300 1093048 -198537102 - MER4E LTR ERV1 0 779 1 10352 185 81 34 chr5 1093048 1093359 -198536791 - L1M4 LINE L1 -5704 678 14 5002 158 56 8 chr5 1093381 1094243 -198535907 + MER4D LTR ERV1 1 903 0 198 71 0 0 chr5 1094643 1094671 -198535479 + (GA)n Simple_repeat Simple_repeat 2 29 0 331 253 65 84 chr5 1094838 1094992 -198535158 + L1ME4a LINE L1 5274 5424 -2384 6120 57 5 4 chr5 1095696 1096489 -198533661 - L1PA6 LINE L1 0 6154 5361 1703 181 21 21 chr5 1096503 1096878 -198533272 + L1MB3 LINE L1 3893 4267 -1879 * 4716 222 7 3 chr5 1096864 1097983 -198532167 - L1PB1 LINE L1 -879 5267 4144 * 5519 75 19 82 chr5 1097978 1098495 -198531655 + L1PB1 LINE L1 5254 5802 -349 240 35 0 0 chr5 1098495 1098524 -198531626 + (CA)n Simple_repeat Simple_repeat 2 30 0 5519 75 19 82 chr5 1098524 1098609 -198531541 + L1PB1 LINE L1 5802 5891 -260 505 42 32 21 chr5 1098609 1098704 -198531446 + (TA)n Simple_repeat Simple_repeat 2 97 0 5519 75 19 82 chr5 1098704 1099059 -198531091 + L1PB1 LINE L1 5891 6151 0 2253 137 0 0 chr5 1099067 1099373 -198530777 + AluSx SINE Alu 3 308 -4 4437 193 32 67 chr5 1099375 1099489 -198530661 + L1MB3 LINE L1 4256 4372 -1811 2523 76 0 0 chr5 1099489 1099792 -198530358 + AluY SINE Alu 1 303 -8 4437 193 32 67 chr5 1099792 1099967 -198530183 + L1MB3 LINE L1 4372 4551 -1632 2271 101 3 3 chr5 1099967 1100265 -198529885 + AluY SINE Alu 1 298 -13 429 20 0 0 chr5 1100265 1100315 -198529835 + (TA)n Simple_repeat Simple_repeat 2 51 0 4437 193 32 67 chr5 1100315 1102007 -198528143 + L1MB3 LINE L1 4549 6166 -17 304 294 12 12 chr5 1103433 1103518 -198526632 + L1ME4a LINE L1 5838 5922 -199 276 221 11 46 chr5 1105393 1105684 -198524466 + GA-rich Low_complexity Low_complexity 1 280 0 1426 178 103 11 chr5 1106913 1107194 -198522956 - AluJb SINE Alu -5 307 1 1213 171 83 0 chr5 1107342 1107559 -198522591 - MER46A DNA MER2_type 0 236 2 1502 144 137 39 chr5 1108275 1108559 -198521591 - AluJo SINE Alu 0 312 1 709 178 89 13 chr5 1108681 1108838 -198521312 + MER1B DNA MER1_type 1 129 -168 276 81 0 0 chr5 1109861 1109898 -198520252 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1110047 1110084 -198520066 + MER1B DNA MER1_type 133 129 -168 235 111 0 0 chr5 1110144 1110180 -198519970 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1110271 1110308 -198519842 + MER1B DNA MER1_type 133 129 -168 237 108 0 0 chr5 1110303 1110340 -198519810 + MER1B DNA MER1_type 133 129 -168 * 243 108 0 0 chr5 1110431 1110468 -198519682 + MER1B DNA MER1_type 133 129 -168 239 62 0 0 chr5 1110463 1110495 -198519655 + MER1B DNA MER1_type 133 124 -173 * 225 132 0 0 chr5 1110622 1110660 -198519490 + MER1B DNA MER1_type 132 129 -168 225 132 0 0 chr5 1110750 1110788 -198519362 + MER1B DNA MER1_type 132 129 -168 235 111 0 0 chr5 1110880 1110916 -198519234 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1111039 1111076 -198519074 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111071 1111108 -198519042 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111103 1111140 -198519010 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111135 1111172 -198518978 + MER1B DNA MER1_type 133 129 -168 235 111 0 0 chr5 1111553 1111589 -198518561 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1111616 1111653 -198518497 + MER1B DNA MER1_type 133 129 -168 244 108 0 0 chr5 1111776 1111813 -198518337 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111808 1111845 -198518305 + MER1B DNA MER1_type 133 129 -168 * 248 105 0 0 chr5 1111871 1111909 -198518241 + MER1B DNA MER1_type 132 129 -168 225 132 0 0 chr5 1111967 1112005 -198518145 + MER1B DNA MER1_type 132 129 -168 243 108 0 0 chr5 1112257 1112294 -198517856 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1112577 1112614 -198517536 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1112737 1112774 -198517376 + MER1B DNA MER1_type 133 129 -168 226 65 0 0 chr5 1112801 1112832 -198517318 + MER1B DNA MER1_type 133 123 -174 1564 120 9 19 chr5 1112852 1113113 -198517037 + MER1B DNA MER1_type 119 337 -2 630 88 0 0 chr5 1113237 1113317 -198516833 + MADE1 DNA Mariner 1 80 0 1976 159 0 0 chr5 1113383 1113679 -198516471 - AluJb SINE Alu -8 304 9 460 255 73 14 chr5 1113816 1114021 -198516129 + L1MD2 LINE L1 5802 6029 -137 789 245 82 90 chr5 1114077 1114501 -198515649 + L1MC5 LINE L1 5412 5832 -1976 2310 98 7 0 chr5 1115373 1115668 -198514482 + AluSq SINE Alu 1 297 -16 381 284 56 10 chr5 1115870 1116067 -198514083 + L1MC5 LINE L1 6960 7165 -796 1633 91 14 5 chr5 1116071 1116281 -198513869 + AluSq SINE Alu 85 296 -17 232 167 88 114 chr5 1116308 1116422 -198513728 - MER5A DNA MER1_type -2 187 77 184 239 250 11 chr5 1116488 1116576 -198513574 + MER5A DNA MER1_type 77 185 -4 325 261 34 0 chr5 1117402 1117490 -198512660 - MER3 DNA MER1_type -118 91 1 258 204 20 0 chr5 1117941 1117990 -198512160 - L2 LINE L2 0 3313 3264 2292 73 59 0 chr5 1118625 1118913 -198511237 - AluY SINE Alu -6 305 1 369 255 206 6 chr5 1118993 1119149 -198511001 + MIR SINE MIR 17 206 -56 637 170 0 0 chr5 1119426 1119520 -198510630 - AluJ/FLAM SINE Alu -217 95 2 2842 123 102 21 chr5 1119756 1120286 -198509864 - MER4B LTR ERV1 -37 573 1 581 332 124 21 chr5 1120371 1120853 -198509297 + L3 LINE CR1 403 934 -643 2164 89 3 7 chr5 1121156 1121460 -198508690 - AluSp SINE Alu -10 303 1 1338 146 56 0 chr5 1121463 1121731 -198508419 - AluJb SINE Alu 0 312 30 332 257 0 46 chr5 1122168 1122343 -198507807 + C-rich Low_complexity Low_complexity 2 168 0 195 310 46 35 chr5 1124788 1124875 -198505275 + MIR SINE MIR 171 258 -4 734 143 0 0 chr5 1125460 1125572 -198504578 + FLAM_C SINE Alu 2 113 -30 1195 157 44 0 chr5 1126360 1126564 -198503586 + AluJb SINE Alu 85 297 -15 557 132 0 0 chr5 1126803 1126879 -198503271 - FLAM_A SINE Alu -24 118 43 2002 110 0 14 chr5 1127446 1127615 -198502535 - AluY SINE Alu -11 300 135 2357 75 13 0 chr5 1127615 1127921 -198502229 - AluY SINE Alu 0 311 2 2002 110 0 14 chr5 1127921 1128043 -198502107 - AluY SINE Alu -176 135 13 1527 97 14 0 chr5 1128046 1128263 -198501887 + AluSg/x SINE Alu 90 309 -1 495 284 45 35 chr5 1128547 1128748 -198501402 - L2 LINE L2 0 3313 3111 1820 160 3 13 chr5 1128749 1129056 -198501094 + AluJb SINE Alu 1 304 -8 210 265 0 73 chr5 1129210 1129346 -198500804 + G-rich Low_complexity Low_complexity 6 131 0 207 0 0 0 chr5 1130228 1130251 -198499899 + (A)n Simple_repeat Simple_repeat 1 23 0 298 130 93 0 chr5 1130265 1130319 -198499831 - MADE1 DNA Mariner -21 59 1 235 366 35 25 chr5 1130414 1130616 -198499534 - L2 LINE L2 -199 3073 2870 313 260 38 10 chr5 1130632 1130813 -198499337 - L2 LINE L2 -285 2987 2793 231 128 26 0 chr5 1132855 1132894 -198497256 - MLT2C1 LTR ERVL -128 269 230 229 161 54 18 chr5 1135775 1135831 -198494319 - MLT2D LTR ERVL -128 286 229 311 65 22 0 chr5 1137620 1137666 -198492484 + (TA)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr5 1137942 1137963 -198492187 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 256 322 45 28 chr5 1140027 1140204 -198489946 - L2 LINE L2 -433 2881 2702 1373 302 50 22 chr5 1141225 1142211 -198487939 + L1ME1 LINE L1 4976 5994 -172 2865 171 36 2 chr5 1142924 1143402 -198486748 - LOR1a LTR ERV1 0 497 4 743 253 45 5 chr5 1144671 1144869 -198485281 - L1MA10 LINE L1 -10 6324 6119 2291 84 0 0 chr5 1146486 1146783 -198483367 - AluY SINE Alu -14 297 1 23 0 0 0 chr5 1146785 1146808 -198483342 + AT_rich Low_complexity Low_complexity 1 23 0 506 246 92 38 chr5 1146994 1147344 -198482806 + MER77 LTR ERV1 1 451 -154 599 236 66 46 chr5 1149851 1150092 -198480058 + MER33 DNA MER1_type 33 278 -46 212 241 0 60 chr5 1152649 1152732 -198477418 + C-rich Low_complexity Low_complexity 6 83 0 306 255 0 21 chr5 1152973 1153067 -198477083 + C-rich Low_complexity Low_complexity 2 93 0 459 94 118 47 chr5 1153769 1153854 -198476296 + AluJo SINE Alu 85 175 -137 1938 107 4 0 chr5 1155521 1155791 -198474359 + AluSx SINE Alu 1 271 -41 326 203 0 16 chr5 1155902 1155966 -198474184 + L2 LINE L2 3251 3313 0 405 247 62 0 chr5 1155984 1156081 -198474069 + Zaphod DNA AcHobo 500 602 -3429 200 264 190 33 chr5 1157139 1157260 -198472890 + L2 LINE L2 3128 3267 -46 635 163 0 36 chr5 1157947 1158113 -198472037 + (CCCTAA)n Simple_repeat Simple_repeat 6 165 0 388 143 0 33 chr5 1158124 1158215 -198471935 + (CCCTAA)n Simple_repeat Simple_repeat 6 93 0 207 0 0 0 chr5 1158403 1158426 -198471724 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2854 125 7 13 chr5 1158426 1158875 -198471275 - L1PB1 LINE L1 -11 6140 5695 1608 152 0 0 chr5 1159872 1160122 -198470028 - AluSx SINE Alu -62 250 1 2070 120 3 3 chr5 1160491 1160792 -198469358 - AluSg SINE Alu -9 301 1 32 26 0 0 chr5 1160801 1160840 -198469310 + AT_rich Low_complexity Low_complexity 1 39 0 2207 104 0 0 chr5 1162637 1162944 -198467206 - AluSg SINE Alu -3 307 1 213 250 59 0 chr5 1165400 1165468 -198464682 + MIR3 SINE MIR 116 187 -21 213 246 31 0 chr5 1165951 1166016 -198464134 + (TG)n Simple_repeat Simple_repeat 1 67 0 216 277 0 15 chr5 1166142 1166207 -198463943 + T-rich Low_complexity Low_complexity 2 65 0 269 262 8 41 chr5 1166607 1166729 -198463421 + (CGGGG)n Simple_repeat Simple_repeat 1 118 0 294 294 198 6 chr5 1168776 1168953 -198461197 - MLT1J2 LTR MaLR -51 399 189 486 337 118 3 chr5 1170446 1170802 -198459348 + HAL1 LINE L1 255 651 -1856 1386 207 97 19 chr5 1170909 1171401 -198458749 + MER74A LTR ERVL 1 558 0 326 221 18 71 chr5 1171548 1171661 -198458489 - L1MC5 LINE L1 -402 7559 7453 1491 195 94 6 chr5 1171694 1172199 -198457951 + L1MB7 LINE L1 5459 6164 -20 1035 285 121 11 chr5 1172208 1172653 -198457497 + HAL1 LINE L1 1295 1788 -719 5666 135 6 26 chr5 1174172 1174672 -198455478 + L1PA14 LINE L1 4877 5385 -776 2259 123 0 0 chr5 1174672 1174980 -198455170 + AluY SINE Alu 1 308 -3 5666 135 6 26 chr5 1174980 1175200 -198454950 + L1PA14 LINE L1 5385 5608 -553 8595 52 20 1 chr5 1175200 1176249 -198453901 - MER11C LTR ERVK -2 1069 1 5666 135 6 26 chr5 1176249 1176808 -198453342 + L1PA14 LINE L1 5608 6133 -28 913 204 23 27 chr5 1176910 1177130 -198453020 + L1MC3 LINE L1 7077 7295 -490 1358 159 92 78 chr5 1177139 1177510 -198452640 + L1MC3 LINE L1 7403 7778 -7 637 131 0 10 chr5 1178386 1178485 -198451665 + MER4A LTR ERV1 1 98 -566 1759 147 9 13 chr5 1178485 1178832 -198451318 + MER4A LTR ERV1 261 664 0 35 41 0 0 chr5 1179334 1179383 -198450767 + AT_rich Low_complexity Low_complexity 1 49 0 9571 42 0 2 chr5 1182158 1184105 -198446045 + L1PA5 LINE L1 4207 6154 0 247 269 65 21 chr5 1184959 1185052 -198445098 - HAL1 LINE L1 -1605 902 806 609 124 0 0 chr5 1187762 1187859 -198442291 + (TG)n Simple_repeat Simple_repeat 2 98 0 26 30 0 0 chr5 1188646 1188679 -198441471 + AT_rich Low_complexity Low_complexity 1 33 0 706 250 41 37 chr5 1189553 1189797 -198440353 - L1MC2 LINE L1 -181 6163 5919 1963 181 91 3 chr5 1189849 1190555 -198439595 - L1MC/D LINE L1 -750 5396 4791 2328 87 3 3 chr5 1192407 1192707 -198437443 - AluSp SINE Alu -13 300 1 6929 61 13 14 chr5 1193189 1194482 -198435668 - L1PA7 LINE L1 -2 6152 4854 299 265 10 0 chr5 1194594 1194692 -198435458 + L1ME1 LINE L1 6060 6158 -8 356 297 42 36 chr5 1195165 1195330 -198434820 - MLT1K LTR MaLR -24 564 399 3949 170 40 77 chr5 1196027 1196685 -198433465 - L1MA7 LINE L1 -5 6286 5610 346 109 0 47 chr5 1196685 1196749 -198433401 - Alu SINE Alu -2 300 240 3949 170 40 77 chr5 1196749 1197010 -198433140 - L1MA7 LINE L1 -681 5610 5341 2050 227 13 13 chr5 1197009 1197459 -198432691 + L1 LINE L1 3805 4254 -1892 * 2836 86 0 3 chr5 1197459 1197821 -198432329 - THE1C LTR MaLR 0 375 15 10390 101 70 3 chr5 1197821 1199302 -198430848 - THE1C-int LTR MaLR 0 1580 1 1777 63 5 5 chr5 1199302 1199525 -198430625 - THE1C LTR MaLR 0 375 153 367 132 0 0 chr5 1199527 1199580 -198430570 + Alu SINE Alu 1 53 -247 1041 79 0 0 chr5 1199582 1199733 -198430417 + AluSg/x SINE Alu 159 309 0 1160 102 25 0 chr5 1199733 1199890 -198430260 - THE1C LTR MaLR -214 161 1 3541 176 40 22 chr5 1199891 1200660 -198429490 + L1 LINE L1 4251 5033 -1113 643 76 0 0 chr5 1200660 1200739 -198429411 + MER30B DNA MER1_type 2 80 -110 874 132 0 0 chr5 1200739 1200853 -198429297 + AluSg SINE Alu 1 114 -196 41171 69 10 8 chr5 1200861 1206994 -198423156 + L1PA6 LINE L1 8 6147 -7 1421 104 5 0 chr5 1206994 1207186 -198422964 + AluSg SINE Alu 105 297 -15 396 0 0 0 chr5 1207187 1207231 -198422919 + (CA)n Simple_repeat Simple_repeat 2 45 0 884 119 60 8 chr5 1207233 1207367 -198422783 + MER30B DNA MER1_type 90 230 0 1119 210 27 57 chr5 1207367 1207700 -198422450 + L1 LINE L1 5027 5349 -797 214 222 14 14 chr5 1207841 1207913 -198422237 + (TA)n Simple_repeat Simple_repeat 2 73 0 728 205 0 0 chr5 1208957 1209084 -198421066 - MSTC LTR MaLR -80 348 222 261 394 8 0 chr5 1209983 1210110 -198420040 - L2 LINE L2 -1 3271 3144 411 304 119 5 chr5 1210508 1210709 -198419441 - L1M4b LINE L1 -6625 234 11 228 170 0 0 chr5 1414323 1414376 -198215774 + (CA)n Simple_repeat Simple_repeat 2 54 0 204 40 0 0 chr5 1414449 1414474 -198215676 + (CA)n Simple_repeat Simple_repeat 2 26 0 291 260 30 20 chr5 1415025 1415125 -198215025 + GA-rich Low_complexity Low_complexity 1 101 0 198 240 40 0 chr5 1417244 1417294 -198212856 - MER5A DNA MER1_type -91 98 47 233 204 20 0 chr5 1419789 1419838 -198210312 + Tigger3(Golem) DNA MER2_type 1 50 -2979 686 173 23 30 chr5 1429926 1430059 -198200091 + FLAM_C SINE Alu 1 132 -1 844 231 163 10 chr5 1430285 1430579 -198199571 + MER44D DNA MER2_type 1 609 0 2012 126 0 7 chr5 1432331 1432658 -198197492 + AluSx SINE Alu 1 312 0 1980 103 59 10 chr5 1438637 1438927 -198191223 - AluSx SINE Alu -8 304 1 279 0 0 0 chr5 1439870 1439901 -198190249 + (TG)n Simple_repeat Simple_repeat 1 31 0 1761 149 14 10 chr5 1440463 1440752 -198189398 - AluJb SINE Alu -22 290 1 2182 95 3 0 chr5 1440774 1441068 -198189082 + AluSg SINE Alu 1 295 -15 24 0 0 0 chr5 1442511 1442535 -198187615 + GC_rich Low_complexity Low_complexity 1 24 0 43 64 0 0 chr5 1442705 1442783 -198187367 + GC_rich Low_complexity Low_complexity 1 78 0 22 56 0 0 chr5 1442914 1442950 -198187200 + GC_rich Low_complexity Low_complexity 1 36 0 2388 58 0 0 chr5 1445839 1446130 -198184020 - AluY SINE Alu -19 292 2 3676 140 28 25 chr5 1446939 1447429 -198182721 - MER50 LTR ERV1 -23 711 217 1660 54 45 18 chr5 1447429 1447651 -198182499 - L1PA6 LINE L1 -5 6149 5922 3676 140 28 25 chr5 1447651 1447846 -198182304 - MER50 LTR ERV1 -517 217 24 2528 157 52 7 chr5 1447995 1448421 -198181729 + MER65A LTR ERV1 1 445 0 484 272 51 24 chr5 1448595 1448729 -198181421 - L1ME1 LINE L1 0 6166 6037 1892 145 10 3 chr5 1448729 1449025 -198181125 + AluJb SINE Alu 1 298 -14 484 272 51 24 chr5 1449025 1449326 -198180824 - L1ME1 LINE L1 -129 6037 5685 1671 140 52 4 chr5 1449330 1449601 -198180549 - AluJo SINE Alu -20 292 9 3174 150 8 0 chr5 1449601 1450209 -198179941 - L1 LINE L1 -1226 5562 4950 * 3189 209 129 3 chr5 1450207 1451067 -198179083 - L1 LINE L1 -5821 968 1 731 253 111 75 chr5 1451148 1451407 -198178743 - L1MEc LINE L1 -3654 2561 2313 2060 116 3 3 chr5 1451407 1451699 -198178451 - AluSq SINE Alu -21 292 1 1905 150 0 26 chr5 1451701 1452008 -198178142 - AluJb SINE Alu -13 299 1 731 253 111 75 chr5 1452008 1453076 -198177074 - L1MEc LINE L1 -3902 2313 1008 686 331 48 3 chr5 1453118 1453432 -198176718 - L1ME1 LINE L1 -2079 6371 6044 2224 106 0 6 chr5 1453446 1453757 -198176393 + AluSq SINE Alu 1 309 -4 3069 164 72 2 chr5 1454380 1454897 -198175253 - MER41C LTR ERV1 0 554 2 1362 184 46 20 chr5 1454898 1455246 -198174904 - MLT1B LTR MaLR -33 357 1 258 322 66 8 chr5 1456252 1456373 -198173777 - MIR SINE MIR -29 233 106 380 258 20 0 chr5 1457093 1457204 -198172946 + MER45B DNA AcHobo 67 177 -863 345 299 46 37 chr5 1457383 1457600 -198172550 + MER45B DNA AcHobo 575 793 -247 659 179 132 24 chr5 1458043 1458171 -198171979 + MER45B DNA AcHobo 785 898 -683 2076 113 14 0 chr5 1458171 1458463 -198171687 + AluSx SINE Alu 1 296 -16 659 179 132 24 chr5 1458463 1458546 -198171604 + MER45B DNA AcHobo 898 1019 -21 213 189 33 67 chr5 1459248 1459338 -198170812 + (CTGGGG)n Simple_repeat Simple_repeat 2 88 0 1969 120 0 4 chr5 1459406 1459682 -198170468 + AluSx SINE Alu 14 288 -24 1475 272 52 82 chr5 1459685 1460450 -198169700 + MER21B LTR ERV1 15 756 -107 2157 101 0 7 chr5 1460747 1461045 -198169105 + AluSx SINE Alu 1 296 -16 239 326 28 21 chr5 1461405 1461546 -198168604 + MER20B DNA MER1_type 257 398 -385 233 301 39 19 chr5 1461705 1461808 -198168342 + MER20B DNA MER1_type 679 783 0 862 129 8 8 chr5 1462659 1462791 -198167359 + AluSg SINE Alu 1 132 -178 2190 112 10 0 chr5 1462791 1463095 -198167055 + AluSg SINE Alu 1 307 -3 1813 118 0 0 chr5 1463298 1463552 -198166598 + AluSx SINE Alu 1 254 -58 339 85 0 0 chr5 1463566 1463613 -198166537 + (TG)n Simple_repeat Simple_repeat 2 48 0 514 309 40 0 chr5 1463616 1463791 -198166359 + L1MC1 LINE L1 4593 4774 -1372 245 270 45 11 chr5 1463809 1463898 -198166252 + (TGGG)n Simple_repeat Simple_repeat 4 95 0 5037 209 33 12 chr5 1463898 1465399 -198164751 + L1MC1 LINE L1 4802 6332 -1 2326 90 3 3 chr5 1465410 1465722 -198164428 + AluSp SINE Alu 1 312 -1 385 348 139 16 chr5 1465872 1466418 -198163732 + L1MC4a LINE L1 5269 5881 -1927 1306 174 92 90 chr5 1466566 1466945 -198163205 + MER66A LTR ERV1 99 478 0 4541 224 81 32 chr5 1467065 1468358 -198161792 + MER66A-int LTR ERV1 53 1408 -5268 2056 199 59 5 chr5 1468805 1469478 -198160672 + MER66A-int LTR ERV1 1424 2168 -4508 * 4315 235 53 20 chr5 1469467 1470050 -198160100 + MER66A-int LTR ERV1 2336 2898 -3778 1569 110 9 9 chr5 1470050 1470278 -198159872 - AluSc SINE Alu -17 292 65 4315 235 53 20 chr5 1470278 1471026 -198159124 + MER66A-int LTR ERV1 2898 3813 -2863 1336 74 0 0 chr5 1471053 1471216 -198158934 - AluSq SINE Alu -150 163 1 945 258 70 36 chr5 1471216 1471407 -198158743 + MER66A-int LTR ERV1 3827 4035 -2641 2227 100 0 3 chr5 1471407 1471707 -198158443 - AluSg SINE Alu -11 299 1 945 258 70 36 chr5 1471707 1471845 -198158305 + MER66A-int LTR ERV1 4035 4167 -2509 1709 135 0 105 chr5 1471848 1472181 -198157969 + AluJb SINE Alu 1 298 -4 610 189 0 24 chr5 1472219 1472346 -198157804 + MER66A-int LTR ERV1 4701 4824 -1852 281 231 15 0 chr5 1472421 1472486 -198157664 + MER66A-int LTR ERV1 6324 6389 -287 525 156 7 3 chr5 1472569 1472711 -198157439 - MER66A LTR ERV1 0 478 298 1425 192 91 0 chr5 1472762 1473070 -198157080 + MER66A-int LTR ERV1 6339 6674 -2 1093 213 144 56 chr5 1473172 1473572 -198156578 + MER66A LTR ERV1 97 478 0 669 265 55 0 chr5 1473967 1474186 -198155964 - MLT1C LTR MaLR -184 283 53 1772 109 66 0 chr5 1474305 1474562 -198155588 - AluSx SINE Alu -38 274 1 626 259 40 71 chr5 1474663 1474960 -198155190 - L1MC4a LINE L1 -3 7805 7518 1317 265 98 55 chr5 1474994 1475431 -198154719 - L1MC4a LINE L1 -387 7421 6935 1712 178 7 7 chr5 1475431 1475724 -198154426 - AluJb SINE Alu -19 293 1 1317 265 98 55 chr5 1475724 1476052 -198154098 - L1MC4a LINE L1 -873 6935 6623 626 193 114 0 chr5 1476237 1476377 -198153773 + MER45A DNA AcHobo 22 177 -1 674 231 89 41 chr5 1476378 1476697 -198153453 - L1MC4a LINE L1 -1332 6476 6113 3732 158 67 42 chr5 1477539 1478210 -198151940 - LTR12 LTR ERV1 0 688 1 632 202 97 45 chr5 1478304 1478551 -198151599 - pTR5 LTR ERV1 -1441 997 738 1393 226 29 9 chr5 1478579 1478929 -198151221 + MLT1A1 LTR MaLR 3 359 -6 446 316 0 7 chr5 1479270 1479422 -198150728 + (CA)n Simple_repeat Simple_repeat 1 151 0 415 300 9 3 chr5 1479456 1479791 -198150359 + (CA)n Simple_repeat Simple_repeat 1 337 0 1828 88 149 0 chr5 1480570 1480831 -198149319 + AluSx SINE Alu 1 300 -2 1166 134 32 0 chr5 1480835 1481021 -198149129 + AluSg/x SINE Alu 118 309 -1 371 291 125 35 chr5 1481296 1481640 -198148510 - MLT1E LTR MaLR -114 479 105 389 285 137 23 chr5 1482389 1482580 -198147570 - MIR SINE MIR -47 215 11 247 224 17 0 chr5 1484809 1484867 -198145283 - MER81 DNA DNA -54 60 2 902 164 0 11 chr5 1486141 1486416 -198143734 + (TCCA)n Simple_repeat Simple_repeat 1 272 0 189 0 0 0 chr5 1486428 1486449 -198143701 + (TCCA)n Simple_repeat Simple_repeat 4 24 0 572 198 12 17 chr5 1486488 1486660 -198143490 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 215 263 0 0 chr5 1486668 1486725 -198143425 + (CCCA)n Simple_repeat Simple_repeat 3 59 0 * 226 271 0 0 chr5 1486698 1486746 -198143404 + polypyrimidine Low_complexity Low_complexity 4 51 0 344 246 8 0 chr5 1486749 1486871 -198143279 + (TCCA)n Simple_repeat Simple_repeat 2 124 0 296 231 10 0 chr5 1486907 1487011 -198143139 + (TCCA)n Simple_repeat Simple_repeat 2 106 0 248 235 59 69 chr5 1487011 1487113 -198143037 - L2 LINE L2 0 3272 3172 1030 218 64 123 chr5 1487470 1487924 -198142226 - MLT1C LTR MaLR -33 434 8 261 304 130 5 chr5 1488100 1488284 -198141866 - LTR16A1 LTR ERVL -3 454 248 476 286 20 6 chr5 1488642 1488842 -198141308 - L1M3 LINE L1 -722 5458 5254 253 323 161 29 chr5 1489865 1490249 -198139901 - L2 LINE L2 -518 2796 2362 383 299 134 5 chr5 1493694 1493888 -198136262 + L1MEd LINE L1 597 815 -5304 1168 297 87 14 chr5 1494127 1494690 -198135460 + L1MEc LINE L1 256 859 -5748 1183 58 41 35 chr5 1495129 1495330 -198134820 + AluY SINE Alu 119 311 0 237 342 46 20 chr5 1495489 1495641 -198134509 + L1MEc LINE L1 1699 1854 -4572 1362 307 91 21 chr5 1495884 1495941 -198134209 + L1MEc LINE L1 2244 2296 -4130 2184 118 0 0 chr5 1495941 1496245 -198133905 + AluSx SINE Alu 3 306 -6 1362 307 91 21 chr5 1496245 1497416 -198132734 + L1MEc LINE L1 2296 3507 -2919 286 295 155 0 chr5 1498078 1498207 -198131943 + MIR SINE MIR 65 213 -49 686 173 23 30 chr5 1503858 1503991 -198126159 + FLAM_C SINE Alu 1 132 -1 844 231 163 10 chr5 1504217 1504511 -198125639 + MER44D DNA MER2_type 1 609 0 252 59 0 0 chr5 1505244 1505278 -198124872 + (CATCC)n Simple_repeat Simple_repeat 2 35 0 241 296 31 0 chr5 1507301 1507399 -198122751 - MER58A DNA MER1_type 0 119 19 995 206 43 16 chr5 1508347 1508604 -198121546 - L1MB3 LINE L1 -8 6175 5912 1590 106 9 127 chr5 1509650 1509989 -198120161 - AluSp SINE Alu -12 301 3 237 297 89 10 chr5 1510072 1510173 -198119977 - MIR SINE MIR -59 149 41 769 185 11 0 chr5 1512444 1512622 -198117528 + (TG)n Simple_repeat Simple_repeat 1 180 0 362 252 34 3 chr5 1513400 1513709 -198116441 + (CA)n Simple_repeat Simple_repeat 1 318 0 225 254 103 40 chr5 1513753 1513977 -198116173 + MLT1I LTR MaLR 29 266 -143 277 219 65 24 chr5 1516041 1516164 -198113986 + (CGGGG)n Simple_repeat Simple_repeat 1 128 0 315 287 6 47 chr5 1516483 1516711 -198113439 + CT-rich Low_complexity Low_complexity 1 218 0 267 107 76 23 chr5 1520658 1520789 -198109361 + (TCTA)n Simple_repeat Simple_repeat 4 141 0 893 97 34 6 chr5 1520813 1520873 -198109277 + (TCCA)n Simple_repeat Simple_repeat 1 241 0 893 97 34 6 chr5 1520873 1521048 -198109102 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 697 128 41 6 chr5 1521074 1521246 -198108904 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 723 105 41 12 chr5 1521287 1521458 -198108692 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 726 140 17 17 chr5 1521479 1521657 -198108493 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 1953 99 4 0 chr5 1523466 1523729 -198106421 - AluSq SINE Alu -14 299 36 379 309 15 5 chr5 1527593 1527794 -198102356 + L1MEc LINE L1 675 877 -5519 3887 167 70 14 chr5 1527794 1528545 -198101605 + L1MB3 LINE L1 4962 5808 -375 1790 174 3 22 chr5 1528545 1528862 -198101288 + AluJb SINE Alu 1 311 -1 3887 167 70 14 chr5 1528862 1529252 -198100898 + L1MB3 LINE L1 5808 6175 -8 2883 235 72 9 chr5 1529263 1530662 -198099488 + L1MEc LINE L1 1634 3085 -3130 280 311 27 12 chr5 1533685 1534028 -198096122 + (GGCTG)n Simple_repeat Simple_repeat 1 348 0 374 103 103 81 chr5 1535759 1535933 -198094217 + (TCCA)n Simple_repeat Simple_repeat 2 179 0 193 81 141 20 chr5 1536044 1536143 -198094007 + (TCCA)n Simple_repeat Simple_repeat 4 114 0 205 143 53 127 chr5 1536172 1536361 -198093789 + (TCCA)n Simple_repeat Simple_repeat 4 178 0 181 281 62 0 chr5 1538222 1538286 -198091864 - L3 LINE CR1 -425 1152 1085 2112 85 3 10 chr5 1539260 1539555 -198090595 + AluSc SINE Alu 1 293 -16 180 0 0 0 chr5 1539562 1539582 -198090568 + (GAAAA)n Simple_repeat Simple_repeat 5 24 0 301 220 33 0 chr5 1539654 1539804 -198090346 + GA-rich Low_complexity Low_complexity 1 155 0 243 0 0 0 chr5 1541616 1541643 -198088507 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 238 365 82 10 chr5 1542135 1542343 -198087807 + MIR SINE MIR 24 246 -16 850 186 10 0 chr5 1542428 1542722 -198087428 + (TGGA)n Simple_repeat Simple_repeat 1 297 0 215 246 36 0 chr5 1542704 1542814 -198087336 + (TAGA)n Simple_repeat Simple_repeat 3 116 0 * 1560 171 15 73 chr5 1542823 1543221 -198086929 + MLT1B LTR MaLR 16 390 0 274 200 40 13 chr5 1543234 1543384 -198086766 + (TAGA)n Simple_repeat Simple_repeat 3 156 0 273 333 19 0 chr5 1544480 1544585 -198085565 + MIR SINE MIR 79 185 -77 1541 154 18 91 chr5 1545963 1546294 -198083856 - AluJo SINE Alu -3 309 3 504 188 0 0 chr5 1546647 1546775 -198083375 + (CA)n Simple_repeat Simple_repeat 1 128 0 26 0 0 0 chr5 1547846 1547872 -198082278 + GC_rich Low_complexity Low_complexity 1 26 0 241 267 0 0 chr5 1548843 1548918 -198081232 + C-rich Low_complexity Low_complexity 1 75 0 641 238 105 28 chr5 1549006 1549292 -198080858 - MLT1A1 LTR MaLR -15 350 43 1491 170 65 0 chr5 1549559 1549835 -198080315 + AluJb SINE Alu 1 294 -18 1155 325 34 26 chr5 1550991 1551551 -198078599 + ERVL LTR ERVL 2615 3182 -2582 803 235 10 56 chr5 1551551 1551747 -198078403 - MER5A DNA MER1_type -2 187 1 1155 325 34 26 chr5 1551747 1551799 -198078351 + ERVL LTR ERVL 3182 3232 -2532 759 320 123 6 chr5 1551839 1552408 -198077742 + ERVL LTR ERVL 3267 3953 -1741 1521 256 72 4 chr5 1552410 1552894 -198077256 + L1M4 LINE L1 4201 4717 -1429 1917 235 97 27 chr5 1553134 1553156 -198076994 - L1ME1 LINE L1 -180 6055 6036 2082 110 0 0 chr5 1553156 1553437 -198076713 - AluSx SINE Alu -4 308 28 1917 235 97 27 chr5 1553437 1554551 -198075599 - L1ME1 LINE L1 -199 6036 4828 1499 192 58 36 chr5 1554551 1554915 -198075235 + MLT1A2 LTR MaLR 1 372 -2 1917 235 97 27 chr5 1554915 1555069 -198075081 - L1ME1 LINE L1 -1407 4828 4686 1604 240 63 40 chr5 1555082 1555760 -198074390 - L1ME1 LINE L1 -3068 3147 2454 1419 268 70 25 chr5 1555767 1556425 -198073725 - L1ME1 LINE L1 -4995 1234 577 261 224 0 0 chr5 1556437 1556486 -198073664 - L1ME1 LINE L1 -6311 85 37 2088 147 0 0 chr5 1556501 1556807 -198073343 - AluSx SINE Alu -6 306 1 373 259 98 0 chr5 1557006 1557118 -198073032 - L1MEc LINE L1 -3334 3092 2970 666 246 121 25 chr5 1557127 1557468 -198072682 - L1MEc LINE L1 -3513 2913 2606 2116 134 0 6 chr5 1557468 1557781 -198072369 - AluSx SINE Alu -1 311 1 666 246 121 25 chr5 1557781 1558062 -198072088 - L1MEc LINE L1 -3820 2606 2260 1744 161 25 3 chr5 1558062 1558347 -198071803 - AluSx SINE Alu -21 291 1 666 246 121 25 chr5 1558347 1558388 -198071762 - L1MEc LINE L1 -4166 2260 2224 494 306 139 28 chr5 1558388 1558711 -198071439 - L1MEc LINE L1 -4555 1967 1513 270 182 0 0 chr5 1558716 1558771 -198071379 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558776 1558831 -198071319 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558836 1558891 -198071259 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558896 1558951 -198071199 - L1MEc LINE L1 -4859 1567 1513 624 294 102 9 chr5 1558956 1559395 -198070755 - L1MEc LINE L1 -4851 1545 1066 782 311 58 18 chr5 1559405 1559785 -198070365 + ERVL LTR ERVL 4099 4493 -1271 267 396 43 13 chr5 1559863 1560093 -198070057 + ERVL LTR ERVL 4592 4828 -936 332 358 47 4 chr5 1560165 1560397 -198069753 + MLT1I LTR MaLR 61 302 -107 541 317 12 32 chr5 1560785 1561034 -198069116 + ERVL LTR ERVL 5191 5434 -330 332 391 0 0 chr5 1561035 1561209 -198068941 + (TG)n Simple_repeat Simple_repeat 2 175 0 287 280 34 46 chr5 1561137 1561312 -198068838 + (CATG)n Simple_repeat Simple_repeat 1 173 0 * 313 302 0 62 chr5 1561362 1561554 -198068596 + (CATG)n Simple_repeat Simple_repeat 1 180 0 219 401 0 6 chr5 1561528 1561700 -198068450 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 272 392 0 0 chr5 1561775 1561928 -198068222 + (TG)n Simple_repeat Simple_repeat 2 154 0 375 359 0 6 chr5 1561955 1562136 -198068014 + (TG)n Simple_repeat Simple_repeat 1 180 0 491 260 13 29 chr5 1566892 1567903 -198062247 + (CA)n Simple_repeat Simple_repeat 1 995 0 304 364 6 11 chr5 1568048 1568224 -198061926 + (CA)n Simple_repeat Simple_repeat 1 175 0 2150 111 0 13 chr5 1571806 1572113 -198058037 + AluSx SINE Alu 5 307 -5 801 223 128 0 chr5 1577118 1577360 -198052790 - Tigger1 DNA MER2_type -2031 387 115 460 191 107 30 chr5 1577360 1577491 -198052659 - Tigger1 DNA MER2_type -2256 162 22 217 269 0 13 chr5 1579130 1579208 -198050942 + GA-rich Low_complexity Low_complexity 3 79 0 1586 147 73 18 chr5 1581469 1581755 -198048395 + AluJo SINE Alu 1 302 -10 235 229 16 0 chr5 1584752 1584813 -198045337 + (CTGGGG)n Simple_repeat Simple_repeat 2 63 0 666 184 11 10 chr5 1584816 1585110 -198045040 + (GGGTG)n Simple_repeat Simple_repeat 1 294 0 389 281 178 43 chr5 1592597 1592995 -198037155 + MLT1C LTR MaLR 4 455 -12 788 269 82 31 chr5 1593306 1593851 -198036299 + Looper DNA T2_type 29 641 -917 775 263 191 3 chr5 1594024 1594344 -198035806 + Looper DNA T2_type 873 1252 -306 323 304 40 8 chr5 1594823 1594948 -198035202 + Looper DNA T2_type 1350 1478 -80 445 171 170 24 chr5 1596131 1596285 -198033865 + MLT1D LTR MaLR 22 175 -215 2258 114 0 0 chr5 1598432 1598740 -198031410 + AluSx SINE Alu 1 308 -4 262 309 49 8 chr5 1599500 1599623 -198030527 + HAL1 LINE L1 1016 1143 -1364 206 214 0 0 chr5 1600820 1600862 -198029288 + (CA)n Simple_repeat Simple_repeat 1 42 0 278 258 12 24 chr5 1600869 1601036 -198029114 + (CATA)n Simple_repeat Simple_repeat 1 165 0 208 258 11 11 chr5 1601080 1601173 -198028977 + (CA)n Simple_repeat Simple_repeat 1 93 0 326 353 0 8 chr5 1601187 1601320 -198028830 + (CA)n Simple_repeat Simple_repeat 1 132 0 440 293 47 0 chr5 1602341 1602491 -198027659 - MER58A DNA MER1_type -28 196 40 336 258 53 13 chr5 1602963 1603114 -198027036 - Charlie8 DNA MER1_type -2185 232 76 213 358 0 0 chr5 1604107 1604283 -198025867 + (ACCTG)n Simple_repeat Simple_repeat 3 178 0 335 240 69 8 chr5 1605200 1605415 -198024735 - Charlie5 DNA MER1_type 0 2624 2341 231 365 0 10 chr5 1605734 1605838 -198024312 - L1M4 LINE L1 -2191 3955 3853 273 348 73 0 chr5 1606390 1606568 -198023582 - L1M4 LINE L1 -2992 3154 2964 2237 84 10 0 chr5 1606792 1607090 -198023060 + AluSp SINE Alu 1 301 -12 278 311 38 0 chr5 1609835 1609967 -198020183 + L1MC5 LINE L1 6695 6831 -1130 657 238 74 0 chr5 1610339 1610528 -198019622 + MLT1A1 LTR MaLR 147 349 -16 1604 180 38 11 chr5 1610641 1611022 -198019128 + MLT1B LTR MaLR 1 396 0 213 282 59 24 chr5 1615169 1615254 -198014896 - L2 LINE L2 -2 3270 3183 617 206 0 0 chr5 1666388 1666514 -197963636 - MLT2B1 LTR ERVL -394 126 1 1434 80 0 0 chr5 1666647 1666823 -197963327 - AluSc SINE Alu 0 309 134 281 277 76 25 chr5 1667218 1667337 -197962813 + MIR SINE MIR 88 212 -50 1508 161 103 4 chr5 1667470 1667743 -197962407 + AluJb SINE Alu 1 300 -12 2337 89 7 0 chr5 1668743 1669060 -197961090 - AluSc SINE Alu 0 319 1 670 210 36 6 chr5 1669411 1669578 -197960572 - L1MD1 LINE L1 0 6242 6071 1608 151 9 25 chr5 1669827 1670178 -197959972 - MER4A LTR ERV1 0 664 261 578 133 0 10 chr5 1670178 1670276 -197959874 - MER4A LTR ERV1 -566 98 2 683 196 0 8 chr5 1670751 1670884 -197959266 + FLAM_A SINE Alu 2 133 0 520 255 121 118 chr5 1670938 1671436 -197958714 + L1MEd LINE L1 661 1159 -4960 231 262 0 0 chr5 1672014 1672075 -197958075 + MER20B DNA MER1_type 481 541 -242 452 240 118 36 chr5 1674318 1674707 -197955443 - MER77 LTR ERV1 -102 503 1 2285 97 10 16 chr5 1674909 1675220 -197954930 + AluSg SINE Alu 1 309 -1 710 239 46 10 chr5 1676589 1676786 -197953364 + L1MA10 LINE L1 6121 6324 -10 2559 176 36 2 chr5 1678054 1678532 -197951618 + LOR1a LTR ERV1 4 497 0 1195 304 54 21 chr5 1679247 1680231 -197949919 - L1ME1 LINE L1 -172 5994 4976 267 297 85 18 chr5 1680895 1681060 -197949090 + L2 LINE L2 2706 2881 -433 2284 104 0 0 chr5 1681176 1681463 -197948687 + AluSx SINE Alu 1 287 -25 253 241 158 59 chr5 1681499 1681702 -197948448 + L1ME LINE L1 5303 5525 -639 250 295 84 36 chr5 1681833 1681999 -197948151 + L1ME LINE L1 5650 5823 -347 232 176 0 0 chr5 1682457 1682508 -197947642 + Alu SINE Alu 248 298 -4 204 135 0 0 chr5 1684413 1684450 -197945700 + (GAA)n Simple_repeat Simple_repeat 3 39 0 189 0 0 0 chr5 1685229 1685250 -197944900 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 226 160 20 20 chr5 1686092 1686142 -197944008 + MLT2D LTR ERVL 249 298 -116 268 265 33 9 chr5 1693817 1693952 -197936198 + L2 LINE L2 2851 2987 -285 227 370 24 18 chr5 1693968 1694133 -197936017 + L2 LINE L2 2870 3035 -237 305 111 93 0 chr5 1694264 1694318 -197935832 + MADE1 DNA Mariner 1 59 -21 180 315 14 84 chr5 1694330 1694473 -197935677 + L2 LINE L2 3107 3239 -74 581 277 16 41 chr5 1695286 1695319 -197934831 + L2 LINE L2 3078 3110 -203 2042 144 10 13 chr5 1695319 1695511 -197934639 - AluJb SINE Alu 0 312 120 459 0 0 0 chr5 1695511 1695562 -197934588 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2042 144 10 13 chr5 1695562 1695682 -197934468 - AluJb SINE Alu -192 120 1 581 277 16 41 chr5 1695682 1695890 -197934260 + L2 LINE L2 3110 3313 0 1648 92 14 0 chr5 1696183 1696400 -197933750 - AluSg/x SINE Alu -1 311 92 2048 118 0 4 chr5 1696403 1696702 -197933448 + AluY SINE Alu 13 310 0 473 141 0 0 chr5 1697278 1697349 -197932801 + FLAM SINE Alu 49 119 -24 1259 162 44 0 chr5 1697590 1697794 -197932356 - AluJb SINE Alu -15 297 85 736 162 0 0 chr5 1698584 1698701 -197931449 - FLAM_C SINE Alu -16 117 1 421 235 0 43 chr5 1701787 1701974 -197928176 + G-rich Low_complexity Low_complexity 2 180 0 1235 142 43 114 chr5 1702403 1702728 -197927422 + AluJb SINE Alu 1 302 0 2270 78 3 3 chr5 1702738 1703044 -197927106 + AluSp SINE Alu 1 306 -7 292 157 114 0 chr5 1704277 1704347 -197925803 + MER5A DNA MER1_type 47 124 -65 613 247 110 46 chr5 1706664 1707088 -197923062 + MLT1D LTR MaLR 30 457 -10 402 269 157 15 chr5 1707772 1707969 -197922181 - L1ME LINE L1 -311 5810 5586 405 329 43 18 chr5 1710232 1710396 -197919754 + L1MEd LINE L1 922 1089 -5030 941 156 88 34 chr5 1710439 1710644 -197919506 - MLT1A1 LTR MaLR -11 354 139 656 291 103 19 chr5 1711285 1711316 -197918834 + L1MB7 LINE L1 5848 5875 -309 2256 78 0 7 chr5 1711316 1711612 -197918538 + AluY SINE Alu 1 294 -17 656 291 103 19 chr5 1711612 1711832 -197918318 + L1MB7 LINE L1 5875 6111 -73 9718 35 5 0 chr5 1713859 1715779 -197914371 + L1PA5 LINE L1 4222 6149 -5 1870 112 10 56 chr5 1716162 1716466 -197913684 + AluSx SINE Alu 3 292 -20 2228 120 0 0 chr5 1716653 1716961 -197913189 + AluSx SINE Alu 1 308 -4 457 176 79 22 chr5 1716986 1717135 -197913015 - L1P LINE L1 -748 5406 5254 3806 184 13 5 chr5 1717137 1717888 -197912262 + L1MA4A LINE L1 5372 6128 -175 2010 112 36 10 chr5 1717888 1718341 -197911809 - AluSx SINE Alu 0 461 1 913 175 35 0 chr5 1718344 1718515 -197911635 + L1MA4 LINE L1 6116 6292 -8 310 340 77 19 chr5 1718772 1718928 -197911222 + L1ME4a LINE L1 5476 5640 -481 275 297 123 36 chr5 1718928 1719123 -197911027 + MER58C DNA MER1_type 4 215 0 402 282 91 112 chr5 1719164 1719504 -197910646 + L1ME4a LINE L1 5693 6025 -96 223 248 0 60 chr5 1719667 1719784 -197910366 + (GGGTG)n Simple_repeat Simple_repeat 3 112 0 286 236 8 57 chr5 1721433 1721556 -197908594 + (CGTG)n Simple_repeat Simple_repeat 1 117 0 214 171 0 0 chr5 1722653 1722694 -197907456 + GA-rich Low_complexity Low_complexity 2 42 0 209 130 0 43 chr5 1722776 1722822 -197907328 + (CCCCCA)n Simple_repeat Simple_repeat 4 47 0 858 284 118 5 chr5 1723511 1723916 -197906234 + MLT1C LTR MaLR 17 467 0 539 167 113 20 chr5 1724331 1724481 -197905669 - ORSL DNA AcHobo -8 267 104 336 262 2 43 chr5 1724654 1724748 -197905402 - MLT1C LTR MaLR -45 460 331 657 196 104 159 chr5 1724753 1725119 -197905031 + MLT1A2 LTR MaLR 1 365 -25 2070 138 3 0 chr5 1725614 1725925 -197904225 - AluSq SINE Alu -1 312 1 1029 284 57 3 chr5 1727586 1727917 -197902233 - MLT1A2 LTR MaLR 0 374 26 253 178 42 0 chr5 1728637 1728755 -197901395 + (TG)n Simple_repeat Simple_repeat 2 124 0 210 326 32 21 chr5 1730362 1730457 -197899693 - L3 LINE CR1 -236 1341 1246 306 251 0 0 chr5 1730562 1730790 -197899360 + (TG)n Simple_repeat Simple_repeat 1 228 0 347 205 0 43 chr5 1730811 1730996 -197899154 + (TG)n Simple_repeat Simple_repeat 2 178 0 337 286 162 11 chr5 1732286 1732471 -197897679 - MIR SINE MIR -48 214 2 228 306 24 57 chr5 1732498 1732622 -197897528 + L2 LINE L2 3180 3299 -14 180 0 0 0 chr5 1732626 1732646 -197897504 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1178 118 0 15 chr5 1734182 1734386 -197895764 - L1P5 LINE L1 -662 5489 5289 747 86 19 0 chr5 1734386 1734491 -197895659 + MER30 DNA MER1_type 124 230 0 201 119 0 134 chr5 1735058 1735125 -197895025 + (CGGGGG)n Simple_repeat Simple_repeat 5 62 0 574 133 10 10 chr5 1736365 1736463 -197893687 + MER4A LTR ERV1 1 98 -566 * 1651 126 22 62 chr5 1736459 1736823 -197893327 + MER4A LTR ERV1 257 664 0 21 36 0 0 chr5 1739254 1739282 -197890868 + AT_rich Low_complexity Low_complexity 1 28 0 565 261 32 13 chr5 1739338 1739495 -197890655 + MER63 DNA MER1_type 3 788 -274 246 263 0 91 chr5 1739829 1739928 -197890222 + MIR SINE MIR 6 95 -167 206 333 118 7 chr5 1740998 1741151 -197888999 + MIR SINE MIR 33 202 -60 189 0 0 0 chr5 1741239 1741260 -197888890 + (TA)n Simple_repeat Simple_repeat 2 22 0 1706 147 3 49 chr5 1741261 1741567 -197888583 - AluJb SINE Alu -20 292 1 2299 99 0 3 chr5 1741581 1741894 -197888256 - AluSx SINE Alu 0 312 1 654 316 78 20 chr5 1741965 1742259 -197887891 + L1MEd LINE L1 771 1081 -5038 235 279 83 25 chr5 1742302 1742506 -197887644 + L1MEd LINE L1 1171 1386 -4924 291 242 116 0 chr5 1742512 1742607 -197887543 - L1MEc LINE L1 -5404 992 887 636 321 61 31 chr5 1742636 1743087 -197887063 + L1MEc LINE L1 820 1291 -5430 2169 105 7 0 chr5 1743087 1743383 -197886767 + AluSp SINE Alu 1 298 -15 636 321 61 31 chr5 1743383 1743473 -197886677 + L1MEc LINE L1 1291 1377 -5344 25 51 0 0 chr5 1743491 1743530 -197886620 + AT_rich Low_complexity Low_complexity 1 39 0 1636 158 42 3 chr5 1743561 1743871 -197886279 - MER47A DNA MER2_type -43 323 2 625 309 94 18 chr5 1743875 1744364 -197885786 + L1MEc LINE L1 1342 1867 -4673 3932 140 36 12 chr5 1744366 1745025 -197885125 - L1MA4A LINE L1 -5 7360 6686 11741 177 33 33 chr5 1745026 1745093 -197885057 - L1MA4A LINE L1 -742 6620 6555 2169 125 0 0 chr5 1745093 1745397 -197884753 - AluSx SINE Alu -2 310 7 11741 177 33 33 chr5 1745397 1748536 -197881614 - L1MA4A LINE L1 -807 6555 3418 2490 154 9 37 chr5 1748536 1748972 -197881178 - MSTB LTR MaLR -2 424 1 11741 177 33 33 chr5 1748972 1748998 -197881152 - L1MA4A LINE L1 -3944 3418 3394 560 268 98 5 chr5 1748999 1749193 -197880957 - L1MA4A LINE L1 -5485 1724 1501 * 2137 220 55 0 chr5 1749189 1749680 -197880470 - L1MA4A LINE L1 -6691 518 1 1148 253 85 45 chr5 1749742 1749861 -197880289 + L1MEc LINE L1 1914 2027 -4694 2692 3 0 7 chr5 1749861 1750166 -197879984 + AluYa5 SINE Alu 1 303 -8 1148 253 85 45 chr5 1750166 1750718 -197879432 + L1MEc LINE L1 2027 2612 -4109 1918 238 120 86 chr5 1750763 1751443 -197878707 + L1MEc LINE L1 2669 3407 -3133 2085 110 7 0 chr5 1751443 1751733 -197878417 + AluSx SINE Alu 8 299 -13 1918 238 120 86 chr5 1751733 1752198 -197877952 + L1MEc LINE L1 3407 3854 -2686 279 338 7 7 chr5 1753327 1753466 -197876684 + (TG)n Simple_repeat Simple_repeat 2 140 0 22 0 0 0 chr5 1753486 1753508 -197876642 + AT_rich Low_complexity Low_complexity 1 22 0 612 169 0 0 chr5 1755720 1755850 -197874300 + (TG)n Simple_repeat Simple_repeat 2 131 0 320 235 29 11 chr5 1755933 1755965 -197874185 + MER69 DNA AcHobo 61 91 -2435 2254 106 0 0 chr5 1755965 1756268 -197873882 - AluSc SINE Alu -3 306 4 320 235 29 11 chr5 1756268 1756352 -197873798 + MER69 DNA AcHobo 91 2526 0 306 360 0 0 chr5 1756840 1756965 -197873185 + L1M4 LINE L1 3242 3366 -2780 296 322 0 0 chr5 1757059 1757146 -197873004 + L1M4 LINE L1 3280 3366 -2780 255 299 0 0 chr5 1757169 1757236 -197872914 + L1M4 LINE L1 3300 3366 -2780 333 279 12 0 chr5 1757240 1757326 -197872824 + L1M4 LINE L1 3280 3366 -2780 277 314 12 0 chr5 1757330 1757416 -197872734 + L1M4 LINE L1 3280 3366 -2780 330 279 12 0 chr5 1757420 1757506 -197872644 + L1M4 LINE L1 3280 3366 -2780 * 420 297 7 0 chr5 1757501 1757646 -197872504 - L1M4 LINE L1 -1314 4832 4687 592 120 9 3 chr5 1757652 1757888 -197872262 + AluSp SINE Alu 1 301 -12 1200 223 187 45 chr5 1757891 1758108 -197872042 - L1M4 LINE L1 -1465 4681 4496 1741 183 3 0 chr5 1758108 1758419 -197871731 - AluJb SINE Alu 0 312 1 1200 223 187 45 chr5 1758419 1758723 -197871427 - L1M4 LINE L1 -1650 4496 4237 2045 132 0 0 chr5 1758723 1759026 -197871124 - AluSx SINE Alu -9 303 1 1200 223 187 45 chr5 1759026 1759213 -197870937 - L1M4 LINE L1 -1909 4237 3871 2079 112 14 0 chr5 1759243 1759539 -197870611 - AluSx SINE Alu -12 300 1 1628 224 133 79 chr5 1759869 1760574 -197869576 - LTR1B LTR ERV1 -81 745 3 807 287 45 33 chr5 1760623 1760957 -197869193 - L1ME2 LINE L1 -30 6134 5797 1577 185 207 36 chr5 1760982 1761475 -197868675 + LTR8A LTR ERV1 1 577 -150 1343 286 54 41 chr5 1761475 1761983 -197868167 - L1MDa LINE L1 -4378 2162 1662 2328 84 0 0 chr5 1761983 1762293 -197867857 - AluY SINE Alu -1 310 1 1343 286 54 41 chr5 1762293 1762823 -197867327 - L1MDa LINE L1 -4878 1662 1111 2484 41 0 0 chr5 1762823 1763117 -197867033 - AluY SINE Alu -17 294 1 513 315 47 17 chr5 1763445 1763680 -197866470 - L1MDa LINE L1 -5652 878 637 1578 163 3 18 chr5 1763948 1764231 -197865919 + AluJb SINE Alu 1 279 -33 189 0 0 0 chr5 1764248 1764269 -197865881 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 235 314 83 12 chr5 1764446 1764615 -197865535 - L1MCa LINE L1 -4594 2013 1833 362 22 0 0 chr5 1764646 1764691 -197865459 + MADE1 DNA Mariner 35 79 -1 17596 94 40 26 chr5 1764694 1767234 -197862916 - Charlie3 DNA MER1_type -135 2575 1 306 239 100 30 chr5 1767434 1767668 -197862482 - L1MCa LINE L1 -4879 1547 1282 1186 137 0 0 chr5 1767731 1767945 -197862205 - AluSg/x SINE Alu 0 323 110 1265 86 0 17 chr5 1768282 1768457 -197861693 + AluSg/x SINE Alu 120 291 -19 628 294 60 16 chr5 1773035 1773287 -197856863 + HAL1 LINE L1 19 281 -2226 1753 47 0 5 chr5 1773402 1773617 -197856533 + AluY SINE Alu 82 295 -16 222 91 0 0 chr5 1775566 1775599 -197854551 + (TG)n Simple_repeat Simple_repeat 1 33 0 351 201 75 19 chr5 1775625 1775784 -197854366 + (TG)n Simple_repeat Simple_repeat 1 168 0 242 211 42 21 chr5 1776624 1776719 -197853431 + (CA)n Simple_repeat Simple_repeat 1 97 0 1276 302 67 17 chr5 1776766 1777365 -197852785 + L1MEc LINE L1 125 753 -5643 43669 32 23 1 chr5 1777368 1783384 -197846766 + L1PA3 LINE L1 5 6155 0 382 176 0 0 chr5 1783383 1783451 -197846699 + L1MEc LINE L1 738 805 -5591 * 226 170 0 43 chr5 1783451 1783498 -197846652 + MLT1B LTR MaLR 1 45 -345 1051 97 58 0 chr5 1783530 1783684 -197846466 - AluSg/x SINE Alu -16 294 132 1760 141 61 0 chr5 1783684 1783961 -197846189 - AluSq SINE Alu -19 294 1 486 298 39 12 chr5 1783972 1784227 -197845923 - L1M4 LINE L1 -2305 3841 3580 1867 160 30 24 chr5 1784227 1784800 -197845350 + LTR10E LTR ERV1 1 627 -6 273 128 0 0 chr5 1784800 1784839 -197845311 - L1M4 LINE L1 -2577 3569 3531 * 405 180 7 167 chr5 1784834 1784877 -197845273 + L1ME LINE L1 5558 5606 -560 2148 124 0 6 chr5 1784877 1785191 -197844959 + AluSx SINE Alu 1 312 0 405 180 7 167 chr5 1785191 1785297 -197844853 + L1ME LINE L1 5606 5683 -483 441 259 9 0 chr5 1785410 1785526 -197844624 + L1MA10 LINE L1 6210 6326 -8 24 0 0 0 chr5 1785540 1785564 -197844586 + AT_rich Low_complexity Low_complexity 1 24 0 1925 157 0 0 chr5 1785661 1785961 -197844189 + AluSx SINE Alu 1 300 -12 451 309 47 13 chr5 1785964 1786262 -197843888 + L1MEc LINE L1 1036 1343 -4862 242 303 25 17 chr5 1786431 1786550 -197843600 + L1MEc LINE L1 1512 1631 -4765 205 258 32 0 chr5 1788007 1788069 -197842081 + L2 LINE L2 2306 2369 -945 898 224 0 0 chr5 1789428 1789611 -197840539 - AluJ SINE Alu -9 303 121 787 188 0 0 chr5 1789651 1789779 -197840371 - AluJ SINE Alu -171 141 14 204 40 0 0 chr5 1789795 1789820 -197840330 + (T)n Simple_repeat Simple_repeat 1 25 0 218 40 40 40 chr5 1790181 1790231 -197839919 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 1126 31 0 0 chr5 1790231 1790361 -197839789 - L1PA3 LINE L1 -24 6131 6002 502 188 0 23 chr5 1790918 1791051 -197839099 + CT-rich Low_complexity Low_complexity 4 133 0 248 196 0 36 chr5 1791159 1791215 -197838935 + CT-rich Low_complexity Low_complexity 3 56 0 614 257 59 21 chr5 1791413 1791650 -197838500 - MER33 DNA MER1_type -74 250 5 1325 240 52 3 chr5 1792261 1792623 -197837527 - MER70B LTR ERVL 0 578 199 330 306 45 0 chr5 1792966 1793100 -197837050 - MER70B LTR ERVL -424 154 15 240 35 0 0 chr5 1793166 1793195 -197836955 + (TCCCC)n Simple_repeat Simple_repeat 3 31 0 300 118 71 35 chr5 1843376 1843546 -197786604 + (CA)n Simple_repeat Simple_repeat 1 176 0 380 121 80 12 chr5 1843628 1844048 -197786102 + (CA)n Simple_repeat Simple_repeat 1 448 0 342 119 66 37 chr5 1844588 1844832 -197785318 + (CA)n Simple_repeat Simple_repeat 1 251 0 2668 213 59 6 chr5 1845760 1846386 -197783764 + LTR34 LTR ERV1 1 659 -40 1977 118 0 4 chr5 1846387 1846667 -197783483 + AluSx SINE Alu 1 279 -33 233 204 20 0 chr5 1846791 1846840 -197783310 + LTR34 LTR ERV1 650 699 0 270 237 22 0 chr5 1847442 1847581 -197782569 + G-rich Low_complexity Low_complexity 4 145 0 410 261 6 0 chr5 1847600 1847776 -197782374 + G-rich Low_complexity Low_complexity 3 179 0 374 250 0 0 chr5 1847779 1847895 -197782255 + (CTGGGG)n Simple_repeat Simple_repeat 3 118 0 11278 126 9 21 chr5 1849210 1851006 -197779144 - L1P LINE L1 -4360 1786 11 353 189 19 39 chr5 1852920 1853136 -197777014 + (CACCAT)n Simple_repeat Simple_repeat 1 211 0 420 220 11 40 chr5 1853162 1853339 -197776811 + (CACCAT)n Simple_repeat Simple_repeat 6 177 0 2018 120 0 3 chr5 1855824 1856124 -197774026 - AluSg SINE Alu -11 299 1 1066 298 77 32 chr5 1856378 1856845 -197773305 + L1ME1 LINE L1 5670 6157 -9 513 291 190 51 chr5 1856850 1857043 -197773107 + HAL1 LINE L1 1549 1714 -793 2133 100 3 7 chr5 1857043 1857344 -197772806 + AluSx SINE Alu 1 300 -12 513 291 190 51 chr5 1857344 1857992 -197772158 + HAL1 LINE L1 1714 2507 0 450 310 31 66 chr5 1858268 1858555 -197771595 + MLT1J LTR MaLR 225 501 -10 373 263 49 21 chr5 1859119 1859414 -197770736 + MLT1D LTR MaLR 89 389 -78 872 200 47 0 chr5 1860343 1860513 -197769637 + MER58A DNA MER1_type 46 223 -1 361 224 22 60 chr5 1860617 1860751 -197769399 + L1ME4a LINE L1 5966 6094 -27 2131 99 0 0 chr5 1860753 1861077 -197769073 - AluSx SINE Alu 0 324 1 395 250 0 49 chr5 1861251 1861395 -197768755 + GA-rich Low_complexity Low_complexity 1 137 0 230 150 0 0 chr5 1863546 1863586 -197766564 - MLT1H LTR MaLR -297 298 259 723 228 183 0 chr5 1865640 1865864 -197764286 - L1MB7 LINE L1 -2 6182 5918 2850 92 11 0 chr5 1865877 1866247 -197763903 - THE1C LTR MaLR -1 374 1 427 234 33 3 chr5 1866265 1866430 -197763720 + L1MB7 LINE L1 5683 5855 -329 291 321 0 43 chr5 1868748 1868888 -197761262 - MIR SINE MIR -15 247 114 315 213 0 0 chr5 1869602 1869677 -197760473 + (TG)n Simple_repeat Simple_repeat 2 76 0 542 292 111 58 chr5 1869886 1870129 -197760021 + MLT1J LTR MaLR 245 500 -11 250 327 131 6 chr5 1870536 1870704 -197759446 - MLT1H LTR MaLR -268 281 93 960 248 50 5 chr5 1871133 1871512 -197758638 - L1ME LINE L1 -2805 3275 2880 232 273 80 0 chr5 1871612 1871700 -197758450 - L1ME LINE L1 -4309 1952 1858 407 268 118 75 chr5 1871728 1872521 -197757629 - L1ME LINE L1 -4467 1794 833 1936 130 7 10 chr5 1872521 1872820 -197757330 + AluSx SINE Alu 1 298 -14 407 268 118 75 chr5 1872820 1873142 -197757008 - L1ME LINE L1 -5428 833 526 382 257 64 76 chr5 1873489 1873660 -197756490 - MLT1J2 LTR MaLR -10 440 272 213 314 24 65 chr5 1873877 1874001 -197756149 + L2 LINE L2 3100 3218 -54 276 344 85 27 chr5 1874192 1874416 -197755734 + L2 LINE L2 2572 2808 -506 195 319 44 33 chr5 1874415 1874506 -197755644 + L2 LINE L2 2972 3063 -209 * 193 267 17 17 chr5 1874540 1874600 -197755550 + L2 LINE L2 3180 3239 -74 2549 179 28 13 chr5 1874674 1875131 -197755019 + MLT2B3 LTR ERVL 1 464 -90 217 246 0 0 chr5 1875131 1875188 -197754962 + (TA)n Simple_repeat Simple_repeat 1 57 0 306 256 0 0 chr5 1875188 1875278 -197754872 - L1MC4 LINE L1 -1339 6703 6614 264 149 0 0 chr5 1875365 1875412 -197754738 + (CA)n Simple_repeat Simple_repeat 2 48 0 196 259 0 35 chr5 1875495 1875553 -197754597 + MIR SINE MIR 12 67 -195 215 173 19 0 chr5 1875695 1875747 -197754403 + CT-rich Low_complexity Low_complexity 1 53 0 1122 244 17 27 chr5 1876490 1876785 -197753365 + MLT1E LTR MaLR 302 593 0 234 331 31 39 chr5 1876795 1876925 -197753225 - MLT1L LTR MaLR -426 189 61 236 320 13 0 chr5 1877557 1877635 -197752515 + Tigger3(Golem) DNA MER2_type 1 79 -2950 696 205 53 16 chr5 1877872 1878062 -197752088 + L1MB7 LINE L1 5987 6183 -1 866 159 0 0 chr5 1878141 1878273 -197751877 + FLAM_C SINE Alu 1 132 -11 237 33 0 0 chr5 1878340 1878370 -197751780 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 287 245 136 71 chr5 1878394 1878549 -197751601 + L1MC5 LINE L1 7749 7913 -48 604 292 87 14 chr5 1882045 1882322 -197747828 - MLT1I LTR MaLR 0 409 113 803 271 138 35 chr5 1882595 1882935 -197747215 + MLT1E LTR MaLR 1 375 -218 822 146 0 15 chr5 1882958 1883088 -197747062 - THE1B LTR MaLR -1 363 236 1279 95 0 0 chr5 1883089 1883257 -197746893 + L1PA7 LINE L1 5983 6150 -4 3124 86 2 0 chr5 1883279 1883707 -197746443 - THE1B-int LTR MaLR -1151 429 1 1684 168 75 23 chr5 1883707 1884053 -197746097 - THE1B LTR MaLR 0 364 1 682 271 47 5 chr5 1884058 1884250 -197745900 + MLT1E LTR MaLR 394 593 0 357 331 14 0 chr5 1884257 1884399 -197745751 + MLT1E-int LTR MaLR 15 158 -1213 292 258 56 0 chr5 1884538 1884627 -197745523 + MLT1E-int LTR MaLR 442 535 -836 1820 218 21 42 chr5 1885688 1886165 -197743985 + MLT1C LTR MaLR 1 467 0 21 57 0 0 chr5 1891431 1891466 -197738684 + GC_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 1891684 1891717 -197738433 + GC_rich Low_complexity Low_complexity 1 33 0 198 182 26 26 chr5 1893554 1893631 -197736519 + G-rich Low_complexity Low_complexity 3 79 0 26 30 0 0 chr5 1895737 1895770 -197734380 + GC_rich Low_complexity Low_complexity 1 33 0 408 307 0 51 chr5 1896910 1897200 -197732950 + C-rich Low_complexity Low_complexity 1 275 0 22 35 0 0 chr5 1897344 1897373 -197732777 + GC_rich Low_complexity Low_complexity 1 29 0 224 217 0 0 chr5 1898847 1898893 -197731257 + G-rich Low_complexity Low_complexity 5 50 0 2521 37 0 0 chr5 1899131 1899426 -197730724 + AluY SINE Alu 1 295 -16 201 74 0 0 chr5 1900015 1900042 -197730108 + (CCG)n Simple_repeat Simple_repeat 2 28 0 315 71 0 0 chr5 1903641 1903683 -197726467 + (T)n Simple_repeat Simple_repeat 1 42 0 220 204 0 0 chr5 1903888 1903937 -197726213 + CT-rich Low_complexity Low_complexity 5 53 0 232 151 12 70 chr5 1903955 1904041 -197726109 + CT-rich Low_complexity Low_complexity 1 81 0 252 272 10 48 chr5 1904685 1904788 -197725362 + G-rich Low_complexity Low_complexity 2 100 0 360 0 0 0 chr5 1905859 1905899 -197724251 + (CA)n Simple_repeat Simple_repeat 2 41 0 418 222 0 22 chr5 1907173 1907353 -197722797 + (CACG)n Simple_repeat Simple_repeat 4 179 0 485 177 0 43 chr5 1907370 1907556 -197722594 + (CACG)n Simple_repeat Simple_repeat 1 178 0 439 222 0 20 chr5 1907567 1907881 -197722269 + (CACG)n Simple_repeat Simple_repeat 1 307 0 347 233 0 14 chr5 1907915 1908061 -197722089 + (CACG)n Simple_repeat Simple_repeat 4 147 0 320 217 0 43 chr5 1908091 1908275 -197721875 + (CACG)n Simple_repeat Simple_repeat 4 179 0 * 357 263 0 0 chr5 1908268 1908443 -197721707 + (CA)n Simple_repeat Simple_repeat 1 175 0 217 355 0 11 chr5 1908497 1908590 -197721560 + (CA)n Simple_repeat Simple_repeat 1 92 0 222 191 0 0 chr5 1910515 1910557 -197719593 + (CGG)n Simple_repeat Simple_repeat 1 42 0 231 211 26 53 chr5 1912814 1912928 -197717222 + (CA)n Simple_repeat Simple_repeat 2 112 0 268 108 20 138 chr5 1913041 1913236 -197716914 + (CACAG)n Simple_repeat Simple_repeat 1 172 0 262 155 5 102 chr5 1913187 1913374 -197716776 + (CACG)n Simple_repeat Simple_repeat 3 171 0 * 201 222 0 81 chr5 1913405 1913590 -197716560 + (CA)n Simple_repeat Simple_repeat 1 170 0 1032 57 0 0 chr5 1916329 1916452 -197713698 + AluY SINE Alu 1 123 -188 1104 158 0 0 chr5 1916620 1916791 -197713359 + AluJb SINE Alu 135 305 -7 717 253 50 56 chr5 1918857 1919177 -197710973 - MLT2C1 LTR ERVL -65 332 15 218 283 45 34 chr5 1919441 1919585 -197710565 + MIR SINE MIR 62 206 -56 369 367 62 35 chr5 1920332 1920703 -197709447 + L1MDa LINE L1 1864 2244 -3971 2399 194 16 8 chr5 1920704 1921203 -197708947 + L1MC1 LINE L1 5430 5932 -401 1279 188 37 93 chr5 1921194 1921744 -197708406 + L1M3 LINE L1 5065 5582 -601 * 1900 61 0 0 chr5 1921844 1922108 -197708042 + L1HS LINE L1 5892 6155 0 207 69 0 0 chr5 1922108 1922137 -197708013 + (A)n Simple_repeat Simple_repeat 1 29 0 2161 123 7 0 chr5 1922238 1922540 -197707610 + AluSx SINE Alu 1 304 -8 543 291 41 6 chr5 1923299 1923471 -197706679 - MER45A DNA AcHobo 0 178 1 354 138 55 9 chr5 1923755 1923864 -197706286 + CT-rich Low_complexity Low_complexity 4 117 0 27 0 0 0 chr5 1923870 1923897 -197706253 + AT_rich Low_complexity Low_complexity 1 27 0 180 200 25 0 chr5 1925600 1925640 -197704510 - L2 LINE L2 -86 3186 3146 203 344 0 11 chr5 1926811 1926901 -197703249 + (TATG)n Simple_repeat Simple_repeat 1 89 0 243 354 0 22 chr5 1928976 1929157 -197700993 + (CCTA)n Simple_repeat Simple_repeat 2 178 0 803 332 115 46 chr5 1929984 1930849 -197699301 + L1MDa LINE L1 2271 4241 -1974 2189 92 3 23 chr5 1931087 1931391 -197698759 + AluSx SINE Alu 1 298 -14 960 298 74 47 chr5 1932663 1933781 -197696369 - L1ME LINE L1 -486 5684 4533 1097 233 60 6 chr5 1934220 1934537 -197695613 + MLT1A1 LTR MaLR 20 353 -12 1615 254 109 2 chr5 1935555 1936040 -197694110 - MER82 DNA MER2_type -1 652 116 502 226 10 36 chr5 1936375 1936825 -197693325 + (CA)n Simple_repeat Simple_repeat 1 438 0 263 194 39 0 chr5 1936852 1936955 -197693195 + (CA)n Simple_repeat Simple_repeat 1 107 0 408 147 16 79 chr5 1937037 1937227 -197692923 + (CA)n Simple_repeat Simple_repeat 2 179 0 215 326 93 33 chr5 1937884 1938099 -197692051 + L2 LINE L2 2994 3221 -92 1115 266 18 39 chr5 1938772 1939103 -197691047 - MER33 DNA MER1_type 0 324 1 262 293 0 0 chr5 1939128 1939203 -197690947 + MER58 DNA MER1_type 36 110 -105 5035 203 57 21 chr5 1940321 1940589 -197689561 - Tigger3b DNA MER2_type -1816 1212 955 2296 86 0 3 chr5 1940589 1940891 -197689259 + AluY SINE Alu 1 301 -10 5035 203 57 21 chr5 1940891 1941789 -197688361 - Tigger3b DNA MER2_type -2073 955 4 662 228 53 0 chr5 1942314 1942485 -197687665 + MER5A DNA MER1_type 5 184 -5 21 36 0 0 chr5 1942985 1943013 -197687137 + AT_rich Low_complexity Low_complexity 1 28 0 405 304 89 5 chr5 1943117 1943250 -197686900 + Charlie5 DNA MER1_type 2391 2550 -74 1793 161 0 32 chr5 1943250 1943566 -197686584 - AluJb SINE Alu -2 310 5 405 304 89 5 chr5 1943566 1943646 -197686504 + Charlie5 DNA MER1_type 2550 2622 -2 230 340 19 19 chr5 1944069 1944175 -197685975 - L3b LINE CR1 -228 1355 1250 2441 21 0 0 chr5 1944241 1944567 -197685583 - L1HS LINE L1 -2832 3314 2989 * 16883 16 0 0 chr5 1944564 1947399 -197682751 + L1HS LINE L1 3321 6155 0 24 0 0 0 chr5 1947399 1947423 -197682727 + AT_rich Low_complexity Low_complexity 1 24 0 561 161 0 0 chr5 1947530 1947611 -197682539 + AluS SINE Alu 2 82 -231 1334 203 88 34 chr5 1948883 1949055 -197681095 - MLT1B LTR MaLR -16 374 213 2030 110 0 20 chr5 1949055 1949355 -197680795 - AluSg SINE Alu -16 294 1 1334 203 88 34 chr5 1949355 1949536 -197680614 - MLT1B LTR MaLR -177 213 2 2158 116 7 0 chr5 1949978 1950280 -197679870 + AluSx SINE Alu 1 304 -8 435 290 53 24 chr5 1951325 1951532 -197678618 - MLT1H LTR MaLR -4 545 333 400 282 28 14 chr5 1951589 1951767 -197678383 - MLT1H LTR MaLR -381 168 1 359 211 279 42 chr5 1953444 1953634 -197676516 - MLT1E1 LTR MaLR 0 654 420 521 254 101 21 chr5 1953694 1953883 -197676267 - MLT1E1 LTR MaLR -383 271 68 4067 197 11 5 chr5 1955012 1955820 -197674330 + L1MB3 LINE L1 5368 6180 -3 205 195 0 0 chr5 1956152 1956193 -197673957 + A-rich Low_complexity Low_complexity 1 41 0 2594 186 10 46 chr5 1956394 1956481 -197673669 + L1MA8 LINE L1 5260 5349 -942 2721 16 0 0 chr5 1956481 1956787 -197673363 + AluYb8 SINE Alu 3 308 -10 2594 186 10 46 chr5 1956787 1957286 -197672864 + L1MA8 LINE L1 5349 5825 -466 1476 245 90 25 chr5 1957317 1957382 -197672768 + L1MA9 LINE L1 5768 5827 -485 2075 118 0 13 chr5 1957382 1957688 -197672462 + AluSq SINE Alu 1 302 -11 1476 245 90 25 chr5 1957688 1958135 -197672015 + L1MA9 LINE L1 5827 6312 0 32 75 0 0 chr5 1958143 1958210 -197671940 + AT_rich Low_complexity Low_complexity 1 67 0 598 318 37 16 chr5 1958623 1958868 -197671282 + MLT1A1 LTR MaLR 116 365 0 609 261 73 9 chr5 1958874 1959092 -197671058 - MLT1E1 LTR MaLR -5 649 418 362 280 47 35 chr5 1959126 1959311 -197670839 - MLT1E3 LTR MaLR -382 272 79 604 267 101 17 chr5 1961533 1961975 -197668175 + L1ME2 LINE L1 5043 5517 -647 1083 249 22 11 chr5 1961979 1962256 -197667894 - L1MA6 LINE L1 -36 6264 5985 482 362 29 12 chr5 1962270 1962516 -197667634 + L1ME2 LINE L1 5539 5788 -376 667 266 30 94 chr5 1962631 1963003 -197667147 + L1ME2 LINE L1 5804 6151 -13 21 0 0 0 chr5 1963173 1963194 -197666956 + AT_rich Low_complexity Low_complexity 1 21 0 457 174 43 0 chr5 1963287 1963379 -197666771 + MER85 DNA T2_type 32 127 -12 243 292 108 8 chr5 1963494 1963624 -197666526 - MLT1E LTR MaLR -448 145 3 24 32 0 0 chr5 1965565 1965596 -197664554 + AT_rich Low_complexity Low_complexity 1 31 0 1999 100 14 60 chr5 1968261 1968446 -197661704 - THE1C LTR MaLR -40 335 172 2280 94 3 0 chr5 1968446 1968753 -197661397 + AluSg1 SINE Alu 1 308 -1 1999 100 14 60 chr5 1968753 1968918 -197661232 - THE1C LTR MaLR -203 172 1 201 328 0 0 chr5 1970072 1970130 -197660020 - MIR SINE MIR -111 151 94 457 298 82 21 chr5 1970909 1971238 -197658912 - L1ME4a LINE L1 0 6121 5773 474 272 151 8 chr5 1971247 1971486 -197658664 - MLT1C LTR MaLR -8 459 187 760 198 38 17 chr5 1971651 1971861 -197658289 - MLT1C LTR MaLR -176 214 1 1264 246 107 17 chr5 1973310 1973712 -197656438 + MLT1C LTR MaLR 1 438 -29 564 280 24 47 chr5 1974553 1974764 -197655386 + MIR SINE MIR 24 229 -33 608 182 19 71 chr5 1974924 1975078 -197655072 - MLT2D LTR ERVL -8 406 261 972 248 43 14 chr5 1975228 1975510 -197654640 - MLT2D LTR ERVL -108 306 17 286 339 0 0 chr5 1980382 1980509 -197649641 + HERVL LTR ERVL 907 1033 -4621 1541 166 26 12 chr5 1981080 1981567 -197648583 + MER50 LTR ERV1 1 711 -23 1749 177 53 29 chr5 1981568 1981947 -197648203 - MSTC LTR MaLR -40 388 1 548 266 120 66 chr5 1981949 1982283 -197647867 + HERVL LTR ERVL 1678 2029 -3735 222 336 76 0 chr5 1983115 1983234 -197646916 + L2 LINE L2 3183 3310 -3 535 269 62 10 chr5 1984064 1984272 -197645878 + MER20 DNA MER1_type 1 219 0 189 0 0 0 chr5 1985403 1985424 -197644726 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1484 158 57 0 chr5 1990714 1990960 -197639190 - AluJo SINE Alu -9 303 44 1133 303 77 0 chr5 1991262 1991727 -197638423 + L1MC2 LINE L1 5832 6332 -12 554 206 19 7 chr5 1991733 1991888 -197638262 + GA-rich Low_complexity Low_complexity 2 158 0 1072 172 62 10 chr5 1991888 1992097 -197638053 + AluJo SINE Alu 1 220 -92 259 211 13 40 chr5 1993621 1993697 -197636453 + G-rich Low_complexity Low_complexity 3 76 0 271 360 65 13 chr5 1998082 1998235 -197631915 + MIR3 SINE MIR 18 178 -30 332 323 45 0 chr5 1998246 1998401 -197631749 - MLT1B LTR MaLR -2 652 491 334 358 0 15 chr5 1998416 1998550 -197631600 + (CGTG)n Simple_repeat Simple_repeat 4 135 0 477 324 78 70 chr5 1999207 2000233 -197629917 + L1MEc LINE L1 810 1450 -4946 202 270 20 20 chr5 2000366 2000466 -197629684 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 347 256 22 44 chr5 2000536 2000626 -197629524 + L1MC4 LINE L1 6615 6702 -1340 221 381 0 11 chr5 2000628 2000809 -197629341 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 1982 110 29 0 chr5 2001293 2001591 -197628559 + AluSx SINE Alu 1 306 0 431 283 23 34 chr5 2004503 2004680 -197625470 - MLT1C LTR MaLR -227 240 66 2205 102 0 7 chr5 2006176 2006480 -197623670 + AluSp SINE Alu 1 302 -11 911 211 154 0 chr5 2011516 2011795 -197618355 - MLT1B LTR MaLR -68 322 1 21 0 0 0 chr5 2013957 2013978 -197616172 + AT_rich Low_complexity Low_complexity 1 21 0 236 253 0 11 chr5 2014508 2014595 -197615555 + G-rich Low_complexity Low_complexity 3 88 0 3055 238 63 16 chr5 2015349 2015490 -197614660 - Charlie1 DNA MER1_type -2 2759 2626 2044 108 14 0 chr5 2015490 2015777 -197614373 + AluSg SINE Alu 2 292 -18 3055 238 63 16 chr5 2015777 2016182 -197613968 - Charlie1 DNA MER1_type -135 2626 2241 2350 73 0 16 chr5 2016182 2016485 -197613665 - AluSq SINE Alu -15 298 1 3055 238 63 16 chr5 2016485 2016905 -197613245 - Charlie1 DNA MER1_type -520 2241 1747 270 191 0 76 chr5 2017107 2017239 -197612911 + (CCCCG)n Simple_repeat Simple_repeat 1 121 0 768 211 112 12 chr5 2017318 2017560 -197612590 - MLT1A1 LTR MaLR -99 266 1 2070 120 0 0 chr5 2021045 2021351 -197608799 + AluSx SINE Alu 3 308 0 1163 260 65 38 chr5 2021375 2021855 -197608295 + L1MDa LINE L1 20 512 -6028 283 210 49 0 chr5 2021928 2022009 -197608141 + L1MA7 LINE L1 6205 6289 -2 * 596 239 54 33 chr5 2022002 2022134 -197608016 + L1MDa LINE L1 2454 2582 -3958 2057 100 20 13 chr5 2022134 2022434 -197607716 + AluSg SINE Alu 6 307 -3 596 239 54 33 chr5 2022434 2022631 -197607519 + L1MDa LINE L1 2582 2788 -3752 493 287 16 0 chr5 2022631 2022760 -197607390 - ERVL LTR ERVL -3721 2043 1913 775 219 105 4 chr5 2022905 2023143 -197607007 + MLT1C LTR MaLR 13 274 -193 341 324 0 0 chr5 2023450 2023626 -197606524 + GA-rich Low_complexity Low_complexity 4 179 0 554 215 67 53 chr5 2023636 2023845 -197606305 + MLT1C LTR MaLR 256 467 0 346 281 78 39 chr5 2025060 2025188 -197604962 - L1ME4a LINE L1 -11 6110 5978 325 356 11 40 chr5 2025234 2025411 -197604739 - L1MC4a LINE L1 -1896 5912 5741 347 367 41 20 chr5 2025626 2025822 -197604328 - L1MC4a LINE L1 -756 5390 5191 500 352 89 42 chr5 2025824 2026281 -197603869 + L1MDa LINE L1 2417 2889 -3651 232 309 12 0 chr5 2026389 2026470 -197603680 + L1MDa LINE L1 3119 3200 -3340 615 319 112 13 chr5 2026524 2027214 -197602936 + L1MDa LINE L1 3316 4073 -2467 219 286 0 0 chr5 2027470 2027526 -197602624 + C-rich Low_complexity Low_complexity 1 56 0 369 346 134 60 chr5 2027871 2028380 -197601770 - HAL1b LINE L1 -635 1596 208 339 270 0 0 chr5 2028382 2028620 -197601530 + CT-rich Low_complexity Low_complexity 1 238 0 1194 189 84 3 chr5 2030209 2030534 -197599616 + MLT1B LTR MaLR 15 379 -11 355 375 67 47 chr5 2031120 2031461 -197598689 - L1MC4 LINE L1 0 8042 7695 588 304 55 45 chr5 2032159 2032218 -197597932 + L1MC5 LINE L1 6555 6612 -1196 2333 81 3 0 chr5 2032218 2032515 -197597635 - AluSx SINE Alu -14 298 1 588 304 55 45 chr5 2032515 2032871 -197597279 + L1MC5 LINE L1 6612 6902 -906 677 185 71 28 chr5 2032907 2033253 -197596897 + MSTC LTR MaLR 1 427 -1 1376 216 120 40 chr5 2033253 2033902 -197596248 + L1MC5 LINE L1 6994 7694 -267 2466 168 23 12 chr5 2033971 2034399 -197595751 - Tigger2a DNA MER2_type 0 434 2 271 260 76 18 chr5 2037368 2037484 -197592666 + LTR50 LTR ERVL 327 447 -76 2124 165 49 180 chr5 2037827 2038637 -197591513 - L1MB3 LINE L1 0 6183 5480 1804 171 3 3 chr5 2039933 2040238 -197589912 - AluJb SINE Alu -7 305 1 1452 188 124 3 chr5 2040263 2040609 -197589541 + L1MC2 LINE L1 5941 6328 -16 429 260 19 0 chr5 2041856 2041960 -197588190 - MER117 DNA MER1_type -53 144 39 29 28 0 0 chr5 2042814 2042850 -197587300 + AT_rich Low_complexity Low_complexity 1 36 0 234 286 13 0 chr5 2044968 2045045 -197585105 + L1MC4 LINE L1 7960 8037 -5 591 248 170 47 chr5 2047022 2047430 -197582720 - MLT1H1 LTR MaLR 0 555 44 188 228 18 0 chr5 2048190 2048247 -197581903 + (TG)n Simple_repeat Simple_repeat 2 59 0 520 271 67 5 chr5 2049057 2049261 -197580889 - MER20 DNA MER1_type 0 219 4 239 328 106 29 chr5 2049281 2049629 -197580521 - LTR16C LTR ERVL -36 455 81 1272 184 104 12 chr5 2050449 2050776 -197579374 + MLT1A1 LTR MaLR 1 357 -8 473 249 110 29 chr5 2052210 2052383 -197577767 + MER58A DNA MER1_type 35 221 -3 1900 142 0 34 chr5 2052583 2052906 -197577244 + AluSx SINE Alu 1 312 0 1870 158 10 0 chr5 2053409 2053706 -197576444 + AluJb SINE Alu 1 300 -12 1258 252 102 21 chr5 2053787 2054219 -197575931 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr5 2054238 2054260 -197575890 + AT_rich Low_complexity Low_complexity 1 22 0 4703 87 17 17 chr5 2055422 2056056 -197574094 - MER51A LTR ERV1 0 634 1 354 325 163 0 chr5 2056918 2057084 -197573066 - MIR SINE MIR -7 255 63 312 180 36 18 chr5 2057229 2057340 -197572810 + (CAGAGA)n Simple_repeat Simple_repeat 1 113 0 180 333 61 8 chr5 2059359 2059491 -197570659 - L2 LINE L2 -812 2502 2364 2083 104 7 0 chr5 2059605 2059893 -197570257 - AluSx SINE Alu -22 290 1 197 310 133 5 chr5 2060678 2060881 -197569269 - L2 LINE L2 -1102 2212 1984 2016 115 0 33 chr5 2061201 2061506 -197568644 + AluSx SINE Alu 1 295 -17 391 321 19 19 chr5 2062350 2062512 -197567638 + (CGTG)n Simple_repeat Simple_repeat 1 162 0 221 263 25 12 chr5 2062520 2062600 -197567550 + (TG)n Simple_repeat Simple_repeat 1 81 0 352 241 0 14 chr5 2063470 2063615 -197566535 + (CTGGGG)n Simple_repeat Simple_repeat 1 143 0 2309 171 18 2 chr5 2063986 2064383 -197565767 + MER57A LTR ERV1 1 403 0 1018 247 87 20 chr5 2067187 2067543 -197562607 - MLT1B LTR MaLR -7 383 4 308 272 48 32 chr5 2068516 2068641 -197561509 - L1ME4a LINE L1 -6 6115 5989 373 242 0 0 chr5 2068803 2068894 -197561256 - L1ME4a LINE L1 -204 5960 5870 * 2556 269 35 34 chr5 2068892 2069791 -197560359 - L1M4 LINE L1 -1946 4200 3207 1725 183 0 10 chr5 2069791 2070103 -197560047 - AluSx SINE Alu -3 309 1 2556 269 35 34 chr5 2070103 2070350 -197559800 - L1M4 LINE L1 -2939 3207 2962 23 0 0 0 chr5 2070456 2070479 -197559671 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 2070666 2070688 -197559462 + AT_rich Low_complexity Low_complexity 1 22 0 1612 171 0 4 chr5 2070690 2070953 -197559197 - AluJb SINE Alu -33 279 18 2117 116 3 0 chr5 2070964 2071266 -197558884 - AluSx SINE Alu -9 303 1 388 310 97 57 chr5 2071306 2071744 -197558406 - L1 LINE L1 -2742 3404 2804 1170 196 108 6 chr5 2072891 2073298 -197556852 + LTR45B LTR ERV1 3 603 0 181 262 115 0 chr5 2074056 2074117 -197556033 - MIR SINE MIR -75 133 66 2187 278 48 2 chr5 2074827 2075468 -197554682 - L1MB5 LINE L1 0 6174 5504 401 86 38 153 chr5 2075885 2076208 -197553942 + (CGGTG)n Simple_repeat Simple_repeat 1 285 0 1914 130 0 11 chr5 2078574 2078882 -197551268 - AluSx SINE Alu 0 305 1 1242 183 108 37 chr5 2078883 2079178 -197550972 - MLT2C2 LTR ERVL -146 318 3 241 236 138 41 chr5 2079213 2079336 -197550814 + MLT1J LTR MaLR 277 411 -100 749 119 0 2 chr5 2082861 2083105 -197547045 + AluSx SINE Alu 1 294 -16 476 310 26 0 chr5 2085170 2085325 -197544825 - MER58A DNA MER1_type -23 201 43 1094 129 0 0 chr5 2085586 2085733 -197544417 + AluSg/x SINE Alu 154 300 -12 369 109 0 0 chr5 2085733 2085788 -197544362 + (TA)n Simple_repeat Simple_repeat 1 55 0 38 39 0 0 chr5 2085796 2085848 -197544302 + AT_rich Low_complexity Low_complexity 1 52 0 246 331 57 57 chr5 2085880 2086176 -197543974 - L1MC/D LINE L1 -1944 5864 5569 359 302 75 72 chr5 2086185 2086519 -197543631 - HAL1 LINE L1 -968 1539 1205 231 254 55 18 chr5 2086584 2086694 -197543456 - L1MEd LINE L1 -5059 1060 947 2356 73 0 33 chr5 2086830 2087133 -197543017 + AluSg SINE Alu 1 293 -17 2118 106 3 3 chr5 2087900 2088212 -197541938 - AluSx SINE Alu 0 312 1 239 325 42 16 chr5 2088703 2088894 -197541256 + L1M4 LINE L1 5202 5397 -749 1134 247 47 6 chr5 2089863 2090203 -197539947 - MLT1A1 LTR MaLR 0 365 12 2176 128 6 6 chr5 2090393 2090705 -197539445 + AluSx SINE Alu 1 312 0 2165 123 7 0 chr5 2090922 2091207 -197538943 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr5 2092695 2092717 -197537433 + GC_rich Low_complexity Low_complexity 1 22 0 253 275 0 78 chr5 2093483 2093650 -197536500 + G-rich Low_complexity Low_complexity 3 156 0 284 287 127 45 chr5 2094631 2094875 -197535275 - L1MC4a LINE L1 -1487 6321 6058 1763 154 10 23 chr5 2094898 2095204 -197534946 - AluJo SINE Alu -8 304 3 304 329 87 24 chr5 2096173 2096425 -197533725 - L1MC/D LINE L1 -588 5574 5307 362 254 34 96 chr5 2097698 2097875 -197532275 + MLT1C LTR MaLR 1 166 -224 193 130 0 74 chr5 2098370 2098424 -197531726 + (TTACG)n Simple_repeat Simple_repeat 4 53 0 925 188 96 135 chr5 2100714 2101070 -197529080 - MLT1C LTR MaLR -42 425 7 7197 160 96 8 chr5 2101568 2103292 -197526858 + L1MCa LINE L1 17 1984 -4442 3286 222 31 6 chr5 2103287 2103380 -197526770 + L1MCa LINE L1 3222 3311 -3115 * 2174 130 0 10 chr5 2103380 2103680 -197526470 + AluSx SINE Alu 1 297 -15 3286 222 31 6 chr5 2103680 2104532 -197525618 + L1MCa LINE L1 3311 4190 -2236 703 150 21 21 chr5 2104593 2104733 -197525417 + L1MC1 LINE L1 2043 2182 -4244 4843 187 49 61 chr5 2104745 2107175 -197522975 + L1MC1 LINE L1 4217 8065 0 356 211 21 11 chr5 2109069 2109164 -197520986 + MER53 DNA DNA 23 118 -71 227 286 157 40 chr5 2109178 2109503 -197520647 + MLT1C LTR MaLR 116 478 -71 2203 113 7 3 chr5 2110803 2111103 -197519047 + AluSx SINE Alu 1 301 -11 485 262 167 40 chr5 2111991 2112361 -197517789 + MER31A LTR ERV1 7 427 -39 4886 84 20 55 chr5 2112693 2113409 -197516741 - LTR8 LTR ERV1 0 691 1 544 203 23 16 chr5 2113777 2113905 -197516245 + MER5B DNA MER1_type 1 129 -49 3942 256 64 9 chr5 2114222 2115479 -197514671 - L1MEc LINE L1 -807 5408 4082 3725 261 35 32 chr5 2115477 2117902 -197512248 - L1MEc LINE L1 -2576 3639 1258 * 1370 288 110 0 chr5 2117884 2118384 -197511766 - L1MEc LINE L1 -5555 841 287 * 426 181 96 0 chr5 2118408 2118502 -197511648 - MLT1B LTR MaLR 0 390 288 1826 146 173 19 chr5 2118502 2118873 -197511277 - MSTA LTR MaLR 0 428 1 1543 236 95 31 chr5 2118873 2119547 -197510603 - MER97a DNA MER1_type? -11 883 167 21 36 0 0 chr5 2121046 2121074 -197509076 + AT_rich Low_complexity Low_complexity 1 28 0 272 68 23 0 chr5 2122018 2122062 -197508088 - MADE1 DNA Mariner 0 80 36 344 100 0 0 chr5 2122102 2122152 -197507998 + MADE1 DNA Mariner 31 80 0 27 49 0 0 chr5 2122745 2122786 -197507364 + AT_rich Low_complexity Low_complexity 1 41 0 1998 111 4 4 chr5 2123228 2123499 -197506651 + AluSq SINE Alu 26 296 -17 2160 59 0 0 chr5 2124513 2124768 -197505382 - AluY SINE Alu -3 308 54 349 159 0 133 chr5 2124844 2124957 -197505193 + L1MCa LINE L1 1967 2064 -4362 342 229 0 62 chr5 2124924 2125020 -197505130 - L1MC4 LINE L1 -1339 6703 6614 * 250 312 79 11 chr5 2125021 2125300 -197504850 - L1ME4a LINE L1 -155 5966 5669 1898 174 43 34 chr5 2125307 2125855 -197504295 - MLT2A2 LTR ERVL 0 554 1 2921 217 117 8 chr5 2125869 2126721 -197503429 - L1MB5 LINE L1 0 6174 5231 1770 125 14 7 chr5 2126743 2127023 -197503127 + THE1B LTR MaLR 83 364 0 4664 221 25 29 chr5 2127023 2127347 -197502803 - L1MB5 LINE L1 -907 5239 4915 204 40 0 0 chr5 2127347 2127372 -197502778 + (TTA)n Simple_repeat Simple_repeat 3 27 0 4664 221 25 29 chr5 2127372 2128305 -197501845 - L1MB5 LINE L1 -1231 4915 3987 754 167 8 8 chr5 2331367 2331493 -197298657 + MER49 LTR ERV1 10 135 -788 1516 194 77 119 chr5 2331493 2332074 -197298076 - LTR1B LTR ERV1 0 826 284 249 278 159 20 chr5 2335102 2335253 -197294897 - LTR16B LTR ERVL -4 460 289 603 229 13 0 chr5 2335261 2335499 -197294651 + GA-rich Low_complexity Low_complexity 1 241 0 250 318 122 0 chr5 2336255 2336362 -197293788 + L2 LINE L2 3153 3272 0 580 318 66 3 chr5 2336861 2337147 -197293003 + L1ME3A LINE L1 5548 5851 -319 331 295 0 0 chr5 2338429 2338524 -197291626 + (CA)n Simple_repeat Simple_repeat 2 96 0 411 261 0 0 chr5 2339720 2340131 -197290019 + (TG)n Simple_repeat Simple_repeat 1 411 0 237 237 136 0 chr5 2340905 2340964 -197289186 + L2 LINE L2 3204 3270 -2 196 188 31 0 chr5 2342396 2342460 -197287690 + (TG)n Simple_repeat Simple_repeat 1 66 0 1211 265 131 23 chr5 2342782 2343209 -197286941 + MLT1E LTR MaLR 121 593 0 2070 120 0 3 chr5 2343420 2343728 -197286422 + AluSq SINE Alu 1 307 -6 628 174 14 28 chr5 2343905 2344218 -197285932 + GA-rich Low_complexity Low_complexity 1 308 0 2715 171 37 70 chr5 2345187 2346055 -197284095 - L1MCa LINE L1 -3981 2445 1332 3209 64 5 0 chr5 2346080 2346488 -197283662 - L1PA7 LINE L1 -4 6150 5741 437 311 14 0 chr5 2346549 2346697 -197283453 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2346703 2346992 -197283158 + AluSc SINE Alu 1 296 -13 2339 123 2 73 chr5 2347453 2347851 -197282299 - L1PA13 LINE L1 -289 5874 5505 1337 148 3 67 chr5 2348493 2348824 -197281326 - AluSx SINE Alu 0 312 3 345 251 11 11 chr5 2349813 2349992 -197280158 + (CA)n Simple_repeat Simple_repeat 1 179 0 340 366 6 0 chr5 2350065 2350281 -197279869 + (CA)n Simple_repeat Simple_repeat 1 217 0 2259 84 3 0 chr5 2350583 2350880 -197279270 + AluSp SINE Alu 1 298 -15 266 268 14 0 chr5 2350881 2350952 -197279198 - MER53 DNA DNA -117 72 1 1546 228 56 18 chr5 2351117 2351564 -197278586 - MLT1C LTR MaLR 0 467 4 2202 93 6 10 chr5 2352367 2352679 -197277471 + AluY SINE Alu 1 311 0 183 204 0 0 chr5 2354538 2354582 -197275568 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 277 59 10 chr5 2354643 2354744 -197275406 + MER88 LTR ERVL 79 184 -280 * 257 337 24 12 chr5 2354655 2354824 -197275326 - MER74B LTR ERVL -74 548 378 236 254 17 0 chr5 2354838 2354897 -197275253 - MER74A LTR ERVL -293 265 206 394 203 0 0 chr5 2355125 2355199 -197274951 + AluJ SINE Alu 49 122 -180 258 171 26 13 chr5 2355199 2355275 -197274875 + (TA)n Simple_repeat Simple_repeat 1 77 0 831 199 0 17 chr5 2355276 2355452 -197274698 + AluJ SINE Alu 125 297 -15 373 365 15 0 chr5 2356385 2356543 -197273607 - MIR SINE MIR -62 146 15 395 345 40 17 chr5 2356752 2356926 -197273224 + MER5B DNA MER1_type 1 178 0 23 78 0 0 chr5 2358727 2358778 -197271372 + AT_rich Low_complexity Low_complexity 1 51 0 22 56 0 0 chr5 2359186 2359222 -197270928 + AT_rich Low_complexity Low_complexity 1 36 0 1733 160 17 3 chr5 2359493 2359787 -197270363 - AluJb SINE Alu -14 298 1 1846 114 66 79 chr5 2360670 2361048 -197269102 - THE1C LTR MaLR -2 373 1 1341 215 48 100 chr5 2361687 2362166 -197267984 + MLT1C LTR MaLR 6 459 -8 1206 174 4 17 chr5 2364253 2364494 -197265656 - L1MA3 LINE L1 0 6305 6068 285 350 17 8 chr5 2365278 2365395 -197264755 - MIR3 SINE MIR -53 155 38 245 73 0 24 chr5 2365504 2365545 -197264605 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 10103 29 2 0 chr5 2365545 2367476 -197262674 - L1PA3 LINE L1 -24 6131 4199 438 259 51 0 chr5 2370239 2370397 -197259753 - L1M4 LINE L1 -1638 4508 4343 1286 307 77 10 chr5 2371174 2371877 -197258273 + L1M4 LINE L1 3104 3853 -2293 892 185 70 182 chr5 2371877 2372632 -197257518 + MER4A LTR ERV1 1 870 -2 6174 183 25 70 chr5 2372659 2373540 -197256610 + L1MC1 LINE L1 1 920 -5506 258 32 0 0 chr5 2373540 2373571 -197256579 + (CA)n Simple_repeat Simple_repeat 2 32 0 6174 183 25 70 chr5 2373571 2374045 -197256105 + L1MC1 LINE L1 920 1286 -5140 6898 62 9 2 chr5 2374045 2375211 -197254939 + L1PA7 LINE L1 4979 6150 -4 6174 183 25 70 chr5 2375211 2375341 -197254809 + L1MC1 LINE L1 1286 1420 -5006 5036 227 85 42 chr5 2375326 2376124 -197254026 + L1MC1 LINE L1 1685 2446 -3980 * 291 154 19 0 chr5 2376124 2376176 -197253974 + LTR23 LTR ERV1 306 358 -79 5036 227 85 42 chr5 2376176 2378206 -197251944 + L1MC1 LINE L1 2446 4685 -1741 1738 199 55 19 chr5 2378215 2378632 -197251518 + MSTB1 LTR MaLR 1 432 0 2263 66 3 7 chr5 2378661 2378963 -197251187 + AluY SINE Alu 1 301 -10 388 219 0 0 chr5 2378970 2379034 -197251116 + MLT1D LTR MaLR 125 188 -317 4635 156 66 7 chr5 2379079 2379917 -197250233 + ERVL-B3 LTR ERVL 4871 5757 -7 1784 200 15 151 chr5 2379917 2380530 -197249620 + MLT2B3 LTR ERVL 1 408 -36 * 4644 199 79 14 chr5 2380524 2381337 -197248813 + L1MC1 LINE L1 4871 5630 -983 2003 124 48 0 chr5 2381337 2381627 -197248523 + AluSq SINE Alu 1 304 -9 4644 199 79 14 chr5 2381627 2382442 -197247708 + L1MC1 LINE L1 5630 6602 -11 554 255 136 53 chr5 2382446 2382764 -197247386 + L1M4 LINE L1 4067 4441 -1705 2272 89 0 0 chr5 2382764 2383070 -197247080 + AluY SINE Alu 1 306 0 554 255 136 53 chr5 2383070 2383236 -197246914 + L1M4 LINE L1 4441 4592 -1554 1441 76 0 0 chr5 2383623 2383795 -197246355 + AluSg/x SINE Alu 124 295 -17 249 262 16 0 chr5 2384235 2384296 -197245854 + MER45 DNA AcHobo 61 122 -56 942 185 75 5 chr5 2389201 2389401 -197240749 + L1MA4A LINE L1 5555 5768 -535 231 164 0 0 chr5 2389401 2389456 -197240694 - LTR66 LTR ERVL -162 448 394 551 131 0 4 chr5 2389498 2389599 -197240551 - L1MC/D LINE L1 -560 5682 5585 289 0 49 0 chr5 2389604 2389645 -197240505 + (TA)n Simple_repeat Simple_repeat 2 44 0 2266 156 78 11 chr5 2389646 2390120 -197240030 + L1MA4A LINE L1 5795 6300 -3 197 279 114 13 chr5 2391356 2391435 -197238715 + L2 LINE L2 3208 3294 -19 2023 122 3 20 chr5 2392791 2393086 -197237064 - AluSx SINE Alu 0 312 23 366 362 7 7 chr5 2393141 2393279 -197236871 + MER5B DNA MER1_type 35 172 -6 203 322 67 0 chr5 2398446 2398536 -197231614 + L2 LINE L2 3172 3267 -5 182 367 20 10 chr5 2398607 2398705 -197231445 - MIR SINE MIR -6 256 158 243 0 0 0 chr5 2399049 2399076 -197231074 + (TA)n Simple_repeat Simple_repeat 2 28 0 2268 65 65 0 chr5 2400718 2401010 -197229140 + AluY SINE Alu 1 311 0 193 311 77 46 chr5 2402769 2402965 -197227185 - L2 LINE L2 -490 2824 2623 429 343 50 15 chr5 2404013 2404354 -197225796 - HERV16 LTR ERVL -1217 4547 4195 697 294 81 15 chr5 2405020 2405353 -197224797 - HERV16 LTR ERVL -3845 1151 797 216 260 0 0 chr5 2405365 2405415 -197224735 + (TG)n Simple_repeat Simple_repeat 2 51 0 3064 145 19 6 chr5 2406669 2407194 -197222956 - L1MA2 LINE L1 0 6304 5773 1376 241 20 0 chr5 2408303 2408651 -197221499 - MLT1A1 LTR MaLR -2 363 9 2350 110 3 0 chr5 2408685 2408986 -197221164 + AluSp SINE Alu 1 302 -11 2213 113 0 0 chr5 2409226 2409519 -197220631 - AluSx SINE Alu -17 295 3 279 263 11 11 chr5 2410507 2410686 -197219464 + (CA)n Simple_repeat Simple_repeat 1 179 0 337 376 0 0 chr5 2410777 2410955 -197219195 + (CA)n Simple_repeat Simple_repeat 2 179 0 341 278 0 6 chr5 2410987 2411167 -197218983 + (CA)n Simple_repeat Simple_repeat 2 180 0 286 269 13 0 chr5 2411208 2411286 -197218864 + (CA)n Simple_repeat Simple_repeat 1 79 0 226 260 16 0 chr5 2411307 2411434 -197218716 + (CA)n Simple_repeat Simple_repeat 1 129 0 518 226 36 48 chr5 2412183 2412351 -197217799 + MER5A DNA MER1_type 2 167 -22 2019 131 35 26 chr5 2413745 2414089 -197216061 + THE1B LTR MaLR 18 364 0 1741 171 0 46 chr5 2414112 2414439 -197215711 + AluSx SINE Alu 1 312 0 4165 116 4 48 chr5 2415063 2415745 -197214405 + L1PA13 LINE L1 5505 6156 -7 2265 108 3 16 chr5 2415881 2416223 -197213927 - AluSq SINE Alu 0 313 1 257 363 80 55 chr5 2417207 2417496 -197212654 - L2 LINE L2 -1 3271 2976 315 332 87 23 chr5 2417737 2418129 -197212021 - L2 LINE L2 -646 2668 2252 491 266 42 60 chr5 2418272 2418606 -197211544 - MLT1D LTR MaLR -177 328 1 358 231 0 0 chr5 2418784 2418862 -197211288 - MLT1K LTR MaLR -61 527 450 281 218 72 4 chr5 2419517 2419606 -197210544 - MLT1J LTR MaLR -288 189 74 1273 173 35 35 chr5 2421179 2421463 -197208687 + L1MA5 LINE L1 6017 6300 0 957 253 104 20 chr5 2421480 2421836 -197208314 + MLT1C LTR MaLR 80 465 -2 239 274 71 12 chr5 2422542 2422626 -197207524 + L2 LINE L2 3185 3273 -40 258 81 0 0 chr5 2427931 2427968 -197202182 + (CA)n Simple_repeat Simple_repeat 2 38 0 2247 117 3 3 chr5 2429197 2429505 -197200645 - AluSx SINE Alu -4 308 1 234 228 89 41 chr5 2431704 2431827 -197198323 + L1ME4a LINE L1 5992 6120 -1 25 31 0 0 chr5 2432314 2432346 -197197804 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 2432379 2432407 -197197743 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr5 2432897 2432942 -197197208 + AT_rich Low_complexity Low_complexity 1 45 0 219 217 22 0 chr5 2434014 2434060 -197196090 - L2 LINE L2 -16 3256 3210 2058 95 32 14 chr5 2434156 2434485 -197195665 + AluSq SINE Alu 5 313 0 24 0 0 0 chr5 2434575 2434599 -197195551 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 2437499 2437521 -197192629 + AT_rich Low_complexity Low_complexity 1 22 0 675 160 0 0 chr5 2438027 2438133 -197192017 - AluSc SINE Alu -6 303 198 1425 94 6 0 chr5 2438133 2438314 -197191836 + AluSc SINE Alu 9 190 -119 233 282 0 24 chr5 2441360 2441445 -197188705 + GA-rich Low_complexity Low_complexity 2 84 0 21 0 0 0 chr5 2441546 2441567 -197188583 + AT_rich Low_complexity Low_complexity 1 21 0 222 91 0 0 chr5 2444249 2444282 -197185868 + (TC)n Simple_repeat Simple_repeat 2 34 0 200 209 23 0 chr5 2447698 2447741 -197182409 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 638 132 48 12 chr5 2447748 2447915 -197182235 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 490 133 31 8 chr5 2447942 2448070 -197182080 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 3016 136 21 14 chr5 2448099 2448615 -197181535 - HSMAR2 DNA Mariner -2 1300 781 247 265 34 17 chr5 2448666 2448783 -197181367 + L1MEd LINE L1 990 1108 -5011 2439 174 31 0 chr5 2449713 2450128 -197180022 - MSTA LTR MaLR 0 428 1 229 294 11 0 chr5 2450924 2451016 -197179134 + L1MEd LINE L1 2833 2925 -3204 25 65 0 0 chr5 2451147 2451193 -197178957 + AT_rich Low_complexity Low_complexity 1 46 0 316 281 81 25 chr5 2451431 2451591 -197178559 - MIR SINE MIR 0 262 94 231 179 26 13 chr5 2451685 2451763 -197178387 + (TA)n Simple_repeat Simple_repeat 1 79 0 316 325 68 16 chr5 2451804 2452053 -197178097 + L1M4 LINE L1 5069 5330 -816 1479 255 3 3 chr5 2452278 2452635 -197177515 + L1PB4 LINE L1 5795 6151 -5 378 228 104 41 chr5 2452685 2452953 -197177197 - L1M4 LINE L1 -3057 3089 2805 * 875 288 18 0 chr5 2452950 2453228 -197176922 - L1ME2 LINE L1 -187 5977 5695 578 214 132 31 chr5 2453344 2453565 -197176585 - Charlie2 DNA MER1_type -106 2756 2490 1926 146 7 7 chr5 2453565 2453866 -197176284 + AluSx SINE Alu 1 301 -11 578 214 132 31 chr5 2453866 2453971 -197176179 - Charlie2 DNA MER1_type -372 2490 2397 410 279 268 4 chr5 2453977 2454246 -197175904 - Charlie2b DNA MER1_type -1748 1034 695 219 167 0 0 chr5 2454277 2454319 -197175831 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1441 206 62 62 chr5 2454428 2454637 -197175513 - MLT1A2 LTR MaLR 0 374 163 896 167 0 0 chr5 2454637 2454769 -197175381 - FLAM_C SINE Alu -1 132 1 1441 206 62 62 chr5 2454769 2454933 -197175217 - MLT1A2 LTR MaLR -210 164 1 298 282 130 0 chr5 2454937 2455068 -197175082 - Charlie2b DNA MER1_type -2207 575 428 356 360 20 0 chr5 2455099 2455249 -197174901 - Charlie2b DNA MER1_type -2544 318 166 533 232 34 11 chr5 2455250 2455427 -197174723 + L1MEc LINE L1 2168 2348 -4048 292 217 0 0 chr5 2455429 2455489 -197174661 + AluJ/monomer SINE Alu 241 300 -2 737 259 102 32 chr5 2455503 2455877 -197174273 + L1MEc LINE L1 2303 2702 -3513 348 189 90 115 chr5 2455882 2455929 -197174221 - MSTC LTR MaLR -242 123 76 2133 110 7 7 chr5 2455929 2456220 -197173930 - AluSp SINE Alu -22 291 1 348 189 90 115 chr5 2456220 2456294 -197173856 - MSTC LTR MaLR -289 76 5 21 36 0 0 chr5 2458134 2458162 -197171988 + AT_rich Low_complexity Low_complexity 1 28 0 1704 194 42 35 chr5 2458383 2458812 -197171338 - L1 LINE L1 -816 5330 4899 255 252 55 84 chr5 2458812 2459050 -197171100 + MLT1H LTR MaLR 221 451 -98 448 326 57 6 chr5 2459552 2459727 -197170423 + MIR SINE MIR 43 226 -36 1867 144 92 23 chr5 2461223 2461571 -197168579 + THE1C LTR MaLR 1 372 -3 689 164 4 0 chr5 2462090 2462322 -197167828 + (CA)n Simple_repeat Simple_repeat 1 233 0 270 293 140 25 chr5 2462378 2462535 -197167615 - MIR SINE MIR -10 252 78 23 33 0 0 chr5 2463970 2464000 -197166150 + AT_rich Low_complexity Low_complexity 1 30 0 1810 231 25 104 chr5 2464608 2465328 -197164822 + L1ME2 LINE L1 4615 5277 -869 815 212 0 0 chr5 2465337 2465483 -197164667 - FRAM SINE Alu -21 155 10 2229 246 60 29 chr5 2465501 2465989 -197164161 + L1ME2 LINE L1 5282 5804 -360 2849 104 8 8 chr5 2465989 2466364 -197163786 + THE1C LTR MaLR 1 375 0 2229 246 60 29 chr5 2466364 2466646 -197163504 + L1ME2 LINE L1 5804 6076 -88 194 250 40 53 chr5 2470341 2470417 -197159733 + L2 LINE L2 1634 1708 -1606 1578 183 3 13 chr5 2470448 2470775 -197159375 + AluJo SINE Alu 1 312 0 1209 140 5 5 chr5 2471251 2471444 -197158706 - L1PA13 LINE L1 -5 6158 5966 1464 117 2 14 chr5 2471444 2471718 -197158432 + L1PA12 LINE L1 5754 6017 -114 664 315 247 3 chr5 2471755 2472390 -197157760 + L2 LINE L2 2186 2975 -339 353 201 141 67 chr5 2473174 2473323 -197156827 + L1MC4 LINE L1 7688 7847 -195 4774 225 53 39 chr5 2473396 2473961 -197156189 + L1MD1 LINE L1 1136 1692 -4848 1608 174 48 61 chr5 2473961 2474340 -197155810 + MLT1A2 LTR MaLR 1 374 0 4774 225 53 39 chr5 2474340 2475282 -197154868 + L1MD1 LINE L1 1692 2623 -3917 1863 159 6 25 chr5 2475282 2475404 -197154746 + AluSx SINE Alu 1 124 -188 351 0 0 0 chr5 2475404 2475443 -197154707 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1863 159 6 25 chr5 2475443 2475635 -197154515 + AluSx SINE Alu 124 309 -3 4774 225 53 39 chr5 2475635 2475946 -197154204 + L1MD1 LINE L1 2623 2928 -3612 325 167 0 0 chr5 2475967 2476021 -197154129 - LTR16C LTR ERVL -30 461 408 1444 267 17 8 chr5 2476063 2476538 -197153612 + L1MD1 LINE L1 2959 3437 -3103 1400 243 41 10 chr5 2476531 2476732 -197153418 + L1MD1 LINE L1 5964 6157 -405 * 779 191 0 22 chr5 2476732 2476868 -197153282 + FLAM_C SINE Alu 1 133 0 1400 243 41 10 chr5 2476868 2477073 -197153077 + L1MD1 LINE L1 6157 6380 -182 735 164 37 22 chr5 2477081 2477215 -197152935 + FLAM_C SINE Alu 2 137 -6 453 275 35 7 chr5 2477328 2477470 -197152680 + LTR16C LTR ERVL 316 461 -30 2542 219 9 6 chr5 2477659 2478192 -197151958 - MLT1-int LTR MaLR -835 536 2 21 36 0 0 chr5 2478360 2478388 -197151762 + AT_rich Low_complexity Low_complexity 1 28 0 3064 198 18 36 chr5 2478524 2478700 -197151450 + L1MB3 LINE L1 5446 5624 -559 1575 167 16 46 chr5 2478700 2478835 -197151315 + AluJb SINE Alu 1 138 -174 2024 138 7 0 chr5 2478835 2479132 -197151018 + AluSx SINE Alu 3 301 -11 1575 167 16 46 chr5 2479132 2479301 -197150849 + AluJb SINE Alu 138 296 -16 3064 198 18 36 chr5 2479301 2479797 -197150353 + L1MB3 LINE L1 5624 6106 -77 21 36 0 0 chr5 2480041 2480069 -197150081 + AT_rich Low_complexity Low_complexity 1 28 0 403 279 58 19 chr5 2481257 2481465 -197148685 + MER20 DNA MER1_type 1 216 -3 2498 58 0 29 chr5 2481687 2482000 -197148150 - AluY SINE Alu -7 304 1 499 293 82 47 chr5 2482162 2482650 -197147500 - L2 LINE L2 -208 3064 2556 1879 171 3 0 chr5 2482859 2483158 -197146992 - AluJo SINE Alu -12 300 1 210 71 0 0 chr5 2483681 2483709 -197146441 + (TG)n Simple_repeat Simple_repeat 1 28 0 305 275 58 72 chr5 2483711 2483849 -197146301 - L2 LINE L2 0 3272 3137 488 226 80 0 chr5 2485026 2485163 -197144987 - L1ME1 LINE L1 -65 6101 5954 1490 193 51 10 chr5 2485298 2485594 -197144556 - AluJb SINE Alu -4 308 1 2565 169 55 29 chr5 2485702 2486006 -197144144 + MER7C DNA MER2_type 40 366 -2662 2265 83 0 64 chr5 2486006 2486333 -197143817 - AluSq SINE Alu -7 306 1 2565 169 55 29 chr5 2486333 2486577 -197143573 + MER7C DNA MER2_type 366 602 0 21 0 0 0 chr5 2486818 2486839 -197143311 + AT_rich Low_complexity Low_complexity 1 21 0 1495 268 106 19 chr5 2488471 2489086 -197141064 + L1MCa LINE L1 21 688 -5738 1558 215 95 23 chr5 2491519 2491565 -197138585 - MLT2C2 LTR ERVL -1 463 422 285 98 0 0 chr5 2491565 2491606 -197138544 + (CA)n Simple_repeat Simple_repeat 2 42 0 1558 215 95 23 chr5 2491606 2491991 -197138159 - MLT2C2 LTR ERVL -42 422 1 183 80 0 0 chr5 2492193 2492218 -197137932 + (TG)n Simple_repeat Simple_repeat 2 26 0 1981 156 0 13 chr5 2492964 2493278 -197136872 + AluJb SINE Alu 1 310 -2 33 25 0 0 chr5 2493323 2493363 -197136787 + AT_rich Low_complexity Low_complexity 1 40 0 2759 32 0 0 chr5 2493813 2494121 -197136029 - AluY SINE Alu -3 308 1 27 49 0 0 chr5 2495602 2495643 -197134507 + AT_rich Low_complexity Low_complexity 1 41 0 697 259 49 5 chr5 2496009 2496214 -197133936 - MER20 DNA MER1_type -5 214 1 2149 134 3 0 chr5 2496742 2497049 -197133101 + AluSg SINE Alu 1 308 -2 565 301 75 84 chr5 2497198 2497738 -197132412 + L1MC/D LINE L1 5245 5780 -747 24 32 0 0 chr5 2498011 2498042 -197132108 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 2498773 2498794 -197131356 + AT_rich Low_complexity Low_complexity 1 21 0 270 136 0 0 chr5 2498941 2498985 -197131165 + (T)n Simple_repeat Simple_repeat 1 44 0 22 56 0 0 chr5 2499272 2499308 -197130842 + AT_rich Low_complexity Low_complexity 1 36 0 180 158 0 0 chr5 2499521 2499559 -197130591 + (TG)n Simple_repeat Simple_repeat 2 39 0 396 0 0 0 chr5 2501836 2501880 -197128270 + (CA)n Simple_repeat Simple_repeat 2 45 0 672 36 0 0 chr5 2505322 2505405 -197124745 + (TC)n Simple_repeat Simple_repeat 2 84 0 2310 42 0 0 chr5 2507618 2507882 -197122268 + AluY SINE Alu 40 303 -8 1950 169 80 3 chr5 2508119 2508492 -197121658 + MER57A LTR ERV1 2 403 0 2144 122 0 3 chr5 2508640 2508935 -197121215 - AluSq SINE Alu -15 298 5 2655 34 7 0 chr5 2509364 2509662 -197120488 - AluY SINE Alu -11 300 1 24 0 0 0 chr5 2509725 2509749 -197120401 + AT_rich Low_complexity Low_complexity 1 24 0 2023 147 0 10 chr5 2509751 2510064 -197120086 + AluSg SINE Alu 1 310 0 1916 138 56 30 chr5 2510084 2510388 -197119762 + AluJb SINE Alu 1 312 0 1032 70 0 0 chr5 2510558 2510687 -197119463 - AluY SINE Alu -6 305 177 1988 137 0 3 chr5 2511486 2511779 -197118371 + AluJo SINE Alu 14 305 -7 2133 148 0 0 chr5 2511806 2512153 -197117997 + AluSq SINE Alu 1 347 0 182 405 0 0 chr5 2512176 2512250 -197117900 - MIR SINE MIR -12 250 177 219 36 0 0 chr5 2514055 2514083 -197116067 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 492 304 170 37 chr5 2514227 2514685 -197115465 - L2 LINE L2 -365 2949 2431 741 143 24 18 chr5 2516374 2516542 -197113608 + G-rich Low_complexity Low_complexity 2 170 0 205 104 0 42 chr5 2516556 2516604 -197113546 + (GGGGA)n Simple_repeat Simple_repeat 4 49 0 1868 159 10 0 chr5 2520645 2520971 -197109179 - AluSx SINE Alu 0 312 1 1367 230 7 3 chr5 2523063 2523367 -197106783 + MLT1A1 LTR MaLR 1 305 -60 214 169 31 0 chr5 2523544 2523609 -197106541 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 391 313 129 16 chr5 2523609 2523919 -197106231 + HAL1 LINE L1 858 1202 -1305 2175 97 40 3 chr5 2524417 2524716 -197105434 - AluY SINE Alu -1 310 1 288 125 18 0 chr5 2526551 2526607 -197103543 - L1PB2 LINE L1 -3 6148 6092 2243 105 10 0 chr5 2526609 2526903 -197103247 - AluSg SINE Alu -11 299 3 1012 227 122 34 chr5 2528371 2528766 -197101384 + MLT1C LTR MaLR 2 390 0 2326 105 0 0 chr5 2529017 2529312 -197100838 - AluSx SINE Alu -17 295 1 1905 128 7 0 chr5 2530940 2531229 -197098921 + AluSx SINE Alu 1 291 -21 211 68 0 68 chr5 2531232 2531276 -197098874 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1735 47 5 0 chr5 2531815 2532029 -197098121 + L1PA4 LINE L1 5940 6154 -1 1568 44 0 0 chr5 2532555 2532738 -197097412 + L1PA5 LINE L1 5964 6146 -8 591 276 116 24 chr5 2532788 2533158 -197096992 - MLT1I LTR MaLR -1 408 5 2161 93 7 0 chr5 2533530 2533819 -197096331 - AluSx SINE Alu -21 291 1 2135 139 0 0 chr5 2534590 2534900 -197095250 - AluSx SINE Alu -1 311 2 964 201 126 57 chr5 2534926 2535259 -197094891 + MLT1A1 LTR MaLR 4 359 -6 1678 122 30 19 chr5 2535260 2535531 -197094619 - L1MB2 LINE L1 -41 6130 5857 7849 214 56 19 chr5 2535535 2537033 -197093117 - L1MB2 LINE L1 -631 5552 3946 2221 106 3 0 chr5 2537033 2537335 -197092815 - AluSp SINE Alu -10 303 1 7849 214 56 19 chr5 2537335 2538131 -197092019 - L1MB2 LINE L1 -2237 3946 3181 246 222 32 0 chr5 2538461 2538524 -197091626 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 633 323 69 41 chr5 2538567 2538957 -197091193 - MLT1I LTR MaLR -2 407 7 379 292 169 64 chr5 2539039 2539460 -197090690 + L1ME LINE L1 5272 5736 -430 1426 178 108 93 chr5 2541469 2541604 -197088546 + MLT2C2 LTR ERVL 1 132 -332 843 120 0 24 chr5 2541604 2541729 -197088421 - FLAM_C SINE Alu -11 122 1 1426 178 108 93 chr5 2541729 2541992 -197088158 + MLT2C2 LTR ERVL 132 405 -59 288 120 0 0 chr5 2542039 2542089 -197088061 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 0 0 0 chr5 2543976 2543997 -197086153 + AT_rich Low_complexity Low_complexity 1 21 0 799 205 15 19 chr5 2543997 2544202 -197085948 - L1MA9 LINE L1 -37 6275 6072 259 100 60 0 chr5 2544612 2544662 -197085488 - L1MA9 LINE L1 -241 6071 6019 2713 130 17 9 chr5 2545808 2546230 -197083920 - MSTA LTR MaLR 0 428 4 238 184 102 0 chr5 2546301 2546350 -197083800 + L2 LINE L2 3213 3266 -6 26 88 0 0 chr5 2546938 2547006 -197083144 + AT_rich Low_complexity Low_complexity 1 68 0 378 340 48 14 chr5 2548115 2548262 -197081888 - MIR SINE MIR -4 258 107 25 0 0 0 chr5 2548943 2548968 -197081182 + AT_rich Low_complexity Low_complexity 1 25 0 1794 126 48 0 chr5 2548976 2549268 -197080882 + AluSx SINE Alu 1 305 0 1774 244 125 70 chr5 2549340 2550053 -197080097 + MER21B LTR ERV1 1 752 -111 183 80 0 0 chr5 2550069 2550094 -197080056 + (A)n Simple_repeat Simple_repeat 1 25 0 184 373 63 0 chr5 2550208 2550350 -197079800 + MIR SINE MIR 28 178 -84 359 242 0 11 chr5 2550504 2550595 -197079555 - MLT1A2 LTR MaLR -114 276 187 197 139 23 0 chr5 2550604 2550647 -197079503 + GA-rich Low_complexity Low_complexity 1 44 0 369 209 131 69 chr5 2550652 2550813 -197079337 - MLT1A2 LTR MaLR -217 173 3 5914 118 17 1 chr5 2550860 2552063 -197078087 + L1PA13 LINE L1 4961 6158 -5 1985 129 3 0 chr5 2552063 2552373 -197077777 + AluSx SINE Alu 1 311 -1 248 307 64 21 chr5 2553697 2553837 -197076313 - LTR67 LTR ERVL -4 553 408 1768 141 32 0 chr5 2555255 2555539 -197074611 + AluSx SINE Alu 1 293 -19 294 125 0 0 chr5 2555539 2555587 -197074563 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 1103 119 6 0 chr5 2555589 2555765 -197074385 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 200 278 69 0 chr5 2555846 2555918 -197074232 + MIR3 SINE MIR 115 191 -17 213 65 0 0 chr5 2556114 2556145 -197074005 + (CA)n Simple_repeat Simple_repeat 2 32 0 188 297 16 0 chr5 2556935 2556999 -197073151 + MIR SINE MIR 194 258 -4 660 256 61 17 chr5 2558411 2558734 -197071416 + MER31B LTR ERV1 2 661 0 600 244 31 12 chr5 2559452 2559612 -197070538 - L1MD3 LINE L1 -13 7982 7820 681 261 168 28 chr5 2559635 2559836 -197070314 + L1MC4a LINE L1 7299 7555 -253 1727 188 5 72 chr5 2559836 2560250 -197069900 - MLT1B LTR MaLR -4 386 1 681 261 168 28 chr5 2560250 2560339 -197069811 + L1MC4a LINE L1 7555 7630 -178 2215 110 0 0 chr5 2560351 2560652 -197069498 - AluSg SINE Alu -9 301 1 2492 117 14 0 chr5 2561480 2561839 -197068311 + THE1B LTR MaLR 1 364 0 467 290 134 44 chr5 2561885 2562451 -197067699 - L1ME4a LINE L1 -240 5881 5265 2282 76 0 3 chr5 2562763 2563065 -197067085 - AluY SINE Alu -10 301 1 273 57 0 0 chr5 2564699 2564734 -197065416 + (A)n Simple_repeat Simple_repeat 1 35 0 393 241 52 9 chr5 2566658 2566774 -197063376 + L1MC3 LINE L1 7019 7139 -646 2061 220 70 55 chr5 2566808 2567480 -197062670 + L1MD3 LINE L1 7314 7995 0 1500 149 23 62 chr5 2568118 2568426 -197061724 + AluJb SINE Alu 1 296 -16 568 259 202 3 chr5 2568855 2569226 -197060924 + Charlie2 DNA MER1_type 1886 2330 -532 346 239 128 13 chr5 2569272 2569506 -197060644 + Charlie2 DNA MER1_type 2402 2662 -200 3428 35 2 0 chr5 2569593 2569995 -197060155 - L1PA5 LINE L1 -11 6143 5741 437 311 14 0 chr5 2570056 2570204 -197059946 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2570210 2570499 -197059651 + AluSc SINE Alu 1 296 -13 29 0 0 0 chr5 2573039 2573068 -197057082 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 2576816 2576851 -197053299 + AT_rich Low_complexity Low_complexity 1 35 0 239 212 15 0 chr5 2578057 2578123 -197052027 - L1ME4a LINE L1 -12 6109 6043 213 154 0 0 chr5 2578687 2578726 -197051424 + (CA)n Simple_repeat Simple_repeat 1 39 0 673 210 84 0 chr5 2578837 2579004 -197051146 - L1ME4a LINE L1 -501 5663 5483 315 258 107 67 chr5 2579014 2579239 -197050911 + L1MEd LINE L1 861 1094 -5025 618 156 10 15 chr5 2579242 2579448 -197050702 + (TAGA)n Simple_repeat Simple_repeat 1 205 0 203 197 28 28 chr5 2582374 2582445 -197047705 + (TA)n Simple_repeat Simple_repeat 1 71 0 195 167 0 0 chr5 2582446 2582488 -197047662 + (CA)n Simple_repeat Simple_repeat 1 42 0 435 85 37 0 chr5 2582651 2582733 -197047417 + (CA)n Simple_repeat Simple_repeat 1 85 0 371 106 15 0 chr5 2582878 2582944 -197047206 + (CA)n Simple_repeat Simple_repeat 1 67 0 224 188 38 25 chr5 2583036 2583116 -197047034 + (TA)n Simple_repeat Simple_repeat 1 81 0 306 87 0 0 chr5 2583117 2583163 -197046987 + (CA)n Simple_repeat Simple_repeat 1 46 0 3403 144 44 72 chr5 2583175 2583898 -197046252 - Tigger3b DNA MER2_type 0 1231 529 3363 200 2 0 chr5 2583898 2584543 -197045607 - L1P LINE L1 -1632 4514 3869 635 146 45 0 chr5 2584543 2584649 -197045501 + L1PA13 LINE L1 6034 6148 -15 3419 254 28 7 chr5 2584667 2585595 -197044555 + L1M4 LINE L1 4005 4952 -1194 2295 188 120 12 chr5 2586006 2586496 -197043654 - Tigger3b DNA MER2_type -688 543 1 615 278 78 39 chr5 2586502 2586833 -197043317 - MLT2C1 LTR ERVL -51 346 3 1672 217 30 2 chr5 2590955 2591360 -197038790 - L1MC1 LINE L1 -1 6332 5917 263 170 0 0 chr5 2591360 2591407 -197038743 - MLT2B2 LTR ERVL 0 515 469 702 202 0 0 chr5 2591407 2591585 -197038565 + (CA)n Simple_repeat Simple_repeat 1 178 0 474 251 0 0 chr5 2591597 2591760 -197038390 + (CA)n Simple_repeat Simple_repeat 2 164 0 580 241 77 91 chr5 2591804 2592157 -197037993 - MLT2B2 LTR ERVL -65 349 2 873 239 198 6 chr5 2592211 2592525 -197037625 - MLT1A2 LTR MaLR 0 374 1 1552 220 3 3 chr5 2592547 2592861 -197037289 - L1MC1 LINE L1 -479 5854 5541 1677 79 130 58 chr5 2592941 2593218 -197036932 - AluSp SINE Alu -15 298 2 233 227 0 0 chr5 2594242 2594286 -197035864 + (CCA)n Simple_repeat Simple_repeat 3 46 0 571 232 211 0 chr5 2594296 2594490 -197035660 - MIR SINE MIR -18 244 10 959 246 159 36 chr5 2597115 2597555 -197032595 + MLT1D LTR MaLR 5 498 -7 217 289 96 19 chr5 2597559 2597663 -197032487 - MIR SINE MIR -40 222 111 251 232 0 98 chr5 2599744 2599826 -197030324 - MIR SINE MIR -112 150 77 227 261 43 0 chr5 2600766 2600835 -197029315 - L2 LINE L2 -621 2693 2622 2004 208 42 62 chr5 2602161 2602689 -197027461 - LTR9 LTR ERV1 -95 517 1 659 254 23 17 chr5 2602693 2602870 -197027280 - MLT1A1 LTR MaLR -185 180 3 2052 118 0 9 chr5 2602879 2603194 -197026956 - AluSq SINE Alu -1 312 1 272 222 91 30 chr5 2603212 2603311 -197026839 - MER103 DNA DNA -45 121 17 28 0 0 0 chr5 2603463 2603491 -197026659 + AT_rich Low_complexity Low_complexity 1 28 0 403 218 0 73 chr5 2603509 2603619 -197026531 + MER58 DNA MER1_type 2318 2419 -1 3426 251 85 65 chr5 2604125 2604898 -197025252 + L1ME2 LINE L1 2771 3527 -2637 1396 141 45 0 chr5 2604898 2605118 -197025032 + MER30 DNA MER1_type 1 230 0 3426 251 85 65 chr5 2605118 2605947 -197024203 + L1ME2 LINE L1 3527 4338 -1826 2258 86 7 0 chr5 2605947 2606249 -197023901 + AluSg SINE Alu 1 304 -6 3426 251 85 65 chr5 2606249 2607962 -197022188 + L1ME2 LINE L1 4338 6157 -7 477 0 0 0 chr5 2607962 2608015 -197022135 + (CA)n Simple_repeat Simple_repeat 2 54 0 488 268 94 54 chr5 2609757 2609981 -197020169 + MLT1E LTR MaLR 8 240 -353 1770 250 23 69 chr5 2609988 2610639 -197019511 - MER74B LTR ERVL -1 621 1 930 243 55 16 chr5 2610645 2610900 -197019250 + MLT1E LTR MaLR 329 593 0 213 224 35 17 chr5 2611443 2611501 -197018649 + MIR SINE MIR 108 166 -96 630 322 105 10 chr5 2611513 2611904 -197018246 - MER110 LTR ERV1 -1 490 63 1326 287 58 9 chr5 2612942 2613377 -197016773 - MLT1E2 LTR MaLR 0 626 169 1409 251 90 14 chr5 2613377 2613800 -197016350 + MLT1C LTR MaLR 1 455 -12 528 225 94 7 chr5 2613804 2613942 -197016208 - MLT1E2 LTR MaLR -466 160 11 317 217 169 0 chr5 2613957 2614040 -197016110 - MIR SINE MIR -61 201 105 3489 159 10 26 chr5 2616429 2616864 -197013286 + MER50 LTR ERV1 135 559 -175 2361 83 0 3 chr5 2616864 2617176 -197012974 - AluY SINE Alu 0 311 1 3489 159 10 26 chr5 2617176 2617350 -197012800 + MER50 LTR ERV1 559 734 0 1883 131 14 7 chr5 2619230 2619521 -197010629 + AluSx SINE Alu 3 295 -17 552 30 0 0 chr5 2619521 2619587 -197010563 + (GGAA)n Simple_repeat Simple_repeat 2 67 0 674 243 141 41 chr5 2671173 2671662 -196958488 - MER34 LTR ERV1 0 542 5 2028 76 45 24 chr5 2671724 2672012 -196958138 + AluY SINE Alu 17 310 -1 512 274 85 71 chr5 2672088 2672576 -196957574 - MLT1H LTR MaLR -7 542 1 2269 91 3 0 chr5 2673068 2673364 -196956786 + AluY SINE Alu 1 297 -14 223 246 82 27 chr5 2673744 2673854 -196956296 + L2 LINE L2 1722 1837 -1477 1615 282 63 17 chr5 2673948 2674797 -196955353 - L1ME3 LINE L1 -88 6143 5221 664 301 95 4 chr5 2674851 2674989 -196955161 - L1ME3 LINE L1 -1622 4593 4469 605 268 58 10 chr5 2674989 2675194 -196954956 + MER58C DNA MER1_type 1 215 0 664 301 95 4 chr5 2675194 2675527 -196954623 - L1ME3 LINE L1 -1746 4469 4079 329 172 0 0 chr5 2675563 2675621 -196954529 - Alu SINE Alu -3 299 242 769 177 61 0 chr5 2675621 2675768 -196954382 - L1PA16 LINE L1 -45 6121 5966 * 1316 316 18 15 chr5 2675763 2676438 -196953712 - L1ME3 LINE L1 -2162 4053 3377 485 304 84 24 chr5 2676443 2677423 -196952727 - L1ME3 LINE L1 -4027 2369 1254 435 163 0 0 chr5 2677480 2677560 -196952590 + CT-rich Low_complexity Low_complexity 2 81 0 181 267 0 50 chr5 2679063 2679123 -196951027 + L2 LINE L2 3216 3272 0 186 43 0 0 chr5 2680546 2680569 -196949581 + (CA)n Simple_repeat Simple_repeat 1 23 0 186 237 26 40 chr5 2680604 2680680 -196949470 + MIR SINE MIR 65 139 -69 33 25 0 0 chr5 2681767 2681807 -196948343 + AT_rich Low_complexity Low_complexity 1 40 0 430 292 81 6 chr5 2682629 2682790 -196947360 - MLT1I LTR MaLR -144 265 93 1852 161 137 11 chr5 2682919 2683299 -196946851 + MSTA LTR MaLR 1 428 0 2180 105 10 0 chr5 2684271 2684565 -196945585 - AluSp SINE Alu -16 297 1 2129 99 11 11 chr5 2684565 2684847 -196945303 - AluSx SINE Alu -10 302 21 378 325 113 29 chr5 2686200 2687005 -196943145 - L1M4 LINE L1 -1101 5045 4173 2282 106 7 7 chr5 2688257 2688559 -196941591 - AluSq SINE Alu -11 302 1 259 354 0 0 chr5 2691020 2691119 -196939031 + MIR SINE MIR 140 238 -24 1920 96 44 11 chr5 2691128 2691419 -196938731 + AluY SINE Alu 1 300 0 212 200 20 0 chr5 2692189 2692239 -196937911 + (AATAG)n Simple_repeat Simple_repeat 4 54 0 232 180 73 62 chr5 2692463 2692641 -196937509 + (TG)n Simple_repeat Simple_repeat 1 180 0 461 316 128 47 chr5 2693470 2694038 -196936112 + L1MC4a LINE L1 5025 5634 -755 21 36 0 0 chr5 2694077 2694105 -196936045 + AT_rich Low_complexity Low_complexity 1 28 0 318 335 34 25 chr5 2694176 2694415 -196935735 + L1MC4a LINE L1 5737 5977 -1831 24 32 0 0 chr5 2696144 2696175 -196933975 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr5 2696549 2696569 -196933581 + (T)n Simple_repeat Simple_repeat 1 20 0 1186 220 57 31 chr5 2700355 2700758 -196929392 - MLT1B LTR MaLR -1 373 9 360 197 14 0 chr5 2701081 2701152 -196928998 - MER1B DNA MER1_type -139 158 87 529 200 21 15 chr5 2701564 2701710 -196928440 - MER1B DNA MER1_type -182 115 1 490 312 70 34 chr5 2703167 2703465 -196926685 + MER58B DNA MER1_type 10 318 -23 693 243 101 30 chr5 2703583 2703879 -196926271 - LTR54B LTR ERV1 -2 496 180 189 107 0 0 chr5 2704360 2704388 -196925762 + (CAA)n Simple_repeat Simple_repeat 3 30 0 388 265 5 69 chr5 2705485 2705746 -196924404 + GA-rich Low_complexity Low_complexity 1 244 0 37 99 0 0 chr5 2705966 2706087 -196924063 + AT_rich Low_complexity Low_complexity 1 121 0 664 273 61 63 chr5 2707708 2707850 -196922300 + MLT1C LTR MaLR 43 184 -283 2441 77 0 0 chr5 2707850 2708150 -196922000 + AluY SINE Alu 3 302 -9 664 273 61 63 chr5 2708150 2708417 -196921733 + MLT1C LTR MaLR 184 451 -16 212 371 71 0 chr5 2709489 2709629 -196920521 - MIR SINE MIR -21 241 92 186 43 0 0 chr5 2709996 2710019 -196920131 + (GA)n Simple_repeat Simple_repeat 2 24 0 187 191 128 0 chr5 2711727 2711774 -196918376 + L2 LINE L2 2394 2446 -868 1494 235 37 18 chr5 2712318 2712701 -196917449 + MLT1B LTR MaLR 1 390 0 2325 114 0 9 chr5 2712758 2713073 -196917077 + AluSx SINE Alu 1 312 0 2500 54 0 3 chr5 2713959 2714255 -196915895 - AluY SINE Alu -15 296 2 288 143 0 0 chr5 2714387 2714443 -196915707 + (CCCTAA)n Simple_repeat Simple_repeat 1 56 0 222 62 0 0 chr5 2716713 2716745 -196913405 + (CA)n Simple_repeat Simple_repeat 2 33 0 1069 78 0 48 chr5 2719097 2719263 -196910887 + MER30B DNA MER1_type 23 180 -10 355 244 33 0 chr5 2719585 2719675 -196910475 - MER81 DNA DNA 0 114 22 1309 202 133 22 chr5 2719767 2720182 -196909968 + MLT1C LTR MaLR 7 467 0 1513 118 36 5 chr5 2720623 2720844 -196909306 - MER30 DNA MER1_type 0 230 3 708 145 90 24 chr5 2721196 2721353 -196908797 - MLT2C1 LTR ERVL -40 480 199 22 35 0 0 chr5 2722290 2722319 -196907831 + AT_rich Low_complexity Low_complexity 1 29 0 29 47 0 0 chr5 2722415 2722458 -196907692 + AT_rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr5 2723589 2723610 -196906540 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 4859 216 33 48 chr5 2724466 2726023 -196904127 + Looper DNA T2_type 1 1534 -24 324 0 0 0 chr5 2726024 2726060 -196904090 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1741 215 146 30 chr5 2726071 2726537 -196903613 - MLT2B1 LTR ERVL 0 520 1 188 200 17 0 chr5 2726906 2726966 -196903184 + GA-rich Low_complexity Low_complexity 2 62 0 360 245 31 10 chr5 2728034 2728132 -196902018 + MER69 DNA AcHobo 41 140 -2386 189 0 0 0 chr5 2728601 2728622 -196901528 + (T)n Simple_repeat Simple_repeat 1 21 0 727 265 71 36 chr5 2729105 2729497 -196900653 + MLT1C LTR MaLR 60 465 -2 3943 116 20 3 chr5 2731121 2731725 -196898425 - L1PA13 LINE L1 -4 6159 5546 21 0 0 0 chr5 2731823 2731844 -196898306 + AT_rich Low_complexity Low_complexity 1 21 0 492 152 0 103 chr5 2732407 2732552 -196897598 + MER96B DNA MER1_type? 238 367 -50 309 300 0 42 chr5 2733334 2733454 -196896696 - L2 LINE L2 -2 3311 3197 2151 139 0 7 chr5 2733745 2734055 -196896095 + AluSx SINE Alu 1 308 -4 306 182 106 15 chr5 2734508 2734574 -196895576 + MIR3 SINE MIR 110 181 -27 707 197 34 11 chr5 2735111 2735289 -196894861 + MER96B DNA MER1_type? 2 183 -234 1608 196 68 46 chr5 2735893 2736346 -196893804 - MER31B LTR ERV1 0 466 4 210 341 57 48 chr5 2737485 2737714 -196892436 - L2 LINE L2 -638 2676 2446 23 0 0 0 chr5 2737786 2737809 -196892341 + AT_rich Low_complexity Low_complexity 1 23 0 540 323 72 26 chr5 2737809 2738224 -196891926 + L1MC/D LINE L1 4160 4593 -1553 433 327 92 58 chr5 2739155 2739656 -196890494 + L1MC/D LINE L1 5307 5824 -1984 26 64 0 0 chr5 2740471 2740518 -196889632 + AT_rich Low_complexity Low_complexity 1 47 0 803 244 117 7 chr5 2740631 2740938 -196889212 - MER2 DNA MER2_type -3 341 1 237 148 140 0 chr5 2740941 2741008 -196889142 + MIR SINE MIR 53 141 -67 22 0 0 0 chr5 2741154 2741176 -196888974 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 2741327 2741355 -196888795 + AT_rich Low_complexity Low_complexity 1 28 0 1831 23 5 0 chr5 2741866 2742083 -196888067 - L1PA4 LINE L1 0 6155 5938 202 265 0 0 chr5 2743250 2743299 -196886851 + GA-rich Low_complexity Low_complexity 1 49 0 1178 251 28 3 chr5 2743894 2744257 -196885893 - L1MB1 LINE L1 0 6168 5798 360 258 118 39 chr5 2745211 2745389 -196884761 - L3 LINE CR1 -231 1346 1155 222 216 0 20 chr5 2748101 2748152 -196881998 - L2 LINE L2 -2 3311 3262 320 319 35 0 chr5 2749823 2749939 -196880211 - MIR SINE MIR -108 154 35 255 312 51 13 chr5 2750956 2751113 -196879037 + MER103 DNA DNA 2 164 -2 466 222 31 8 chr5 2751272 2751446 -196878704 + MER61B LTR ERV1 1 105 -320 1412 179 36 11 chr5 2751516 2751795 -196878355 + MER61D LTR ERV1 216 501 0 1864 119 141 28 chr5 2752747 2753074 -196877076 + THE1B LTR MaLR 1 364 0 1654 215 74 17 chr5 2754754 2755172 -196874978 + MLT2B1 LTR ERVL 1 442 -78 1583 287 20 33 chr5 2756540 2757139 -196873011 + L1M2b LINE L1 14 604 -6605 594 241 48 35 chr5 2757337 2757547 -196872603 + L1M2b LINE L1 1685 1881 -5328 3695 210 16 47 chr5 2757683 2758958 -196871192 + L1M2b LINE L1 2162 3396 -3812 806 185 0 0 chr5 2758961 2759107 -196871043 + Tigger1 DNA MER2_type 1 146 -2272 1090 172 5 18 chr5 2759107 2759328 -196870822 + Tigger1 DNA MER2_type 2201 2418 0 9951 193 27 5 chr5 2759331 2761631 -196868519 + L1M2b LINE L1 3406 5757 -1451 864 177 43 22 chr5 2761634 2761866 -196868284 + L1MA5 LINE L1 3972 4208 -3000 573 135 10 0 chr5 2761856 2761960 -196868190 + L1MA5 LINE L1 5753 5857 -1351 * 5087 169 21 24 chr5 2761940 2763515 -196866635 + L1MA5 LINE L1 5789 7357 -5 1383 124 44 26 chr5 2763928 2764154 -196865996 - MER30 DNA MER1_type 0 230 1 2114 146 7 3 chr5 2764514 2764823 -196865327 + AluSx SINE Alu 3 312 0 21 0 0 0 chr5 2766792 2766813 -196863337 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 2766897 2766918 -196863232 + AT_rich Low_complexity Low_complexity 1 21 0 634 305 72 90 chr5 2768866 2769688 -196860462 + L1MDa LINE L1 1236 2042 -4498 9340 104 2 3 chr5 2769872 2772031 -196858119 + L1PA8 LINE L1 4014 6172 0 428 266 62 41 chr5 2772168 2772382 -196857768 + L1MDa LINE L1 2537 2760 -3780 866 94 78 0 chr5 2772382 2772510 -196857640 - MER85 DNA T2_type -1 138 1 428 266 62 41 chr5 2772510 2772585 -196857565 + L1MDa LINE L1 2760 2832 -3708 249 296 19 0 chr5 2772594 2772702 -196857448 - L1M4 LINE L1 -3570 2576 2467 406 264 111 0 chr5 2772838 2773046 -196857104 + L1MDa LINE L1 3176 3406 -3134 1466 160 33 4 chr5 2773048 2773323 -196856827 + L1PA16 LINE L1 5869 6151 -15 866 81 8 0 chr5 2773335 2773458 -196856692 - L1PB1 LINE L1 0 6151 6028 3644 256 79 51 chr5 2773547 2776241 -196853909 - L1M4 LINE L1 -554 5866 3030 1737 178 3 0 chr5 2776241 2776527 -196853623 - AluJb SINE Alu -22 290 4 3644 256 79 51 chr5 2776527 2776795 -196853355 - L1M4 LINE L1 -3390 3030 2771 279 173 0 0 chr5 2776819 2776871 -196853279 - L1MB8 LINE L1 -12 6166 6115 1139 154 125 38 chr5 2776872 2777112 -196853038 - Tigger2 DNA MER2_type -173 2545 1 3464 171 75 8 chr5 2777112 2777861 -196852289 - L1MB7 LINE L1 -86 6098 5300 764 251 137 57 chr5 2777828 2778479 -196851671 - L1M4c LINE L1 -3602 2780 2183 * 3788 60 6 2 chr5 2778479 2778947 -196851203 - L1PA5 LINE L1 -7 6147 5678 764 251 137 57 chr5 2778947 2779435 -196850715 - L1M4c LINE L1 -4199 2183 1455 2224 120 0 0 chr5 2780179 2780479 -196849671 - AluSx SINE Alu -12 300 1 2087 123 7 13 chr5 2781237 2781538 -196848612 - AluSg SINE Alu -11 299 1 421 284 125 85 chr5 2782315 2782772 -196847378 - MLT1H LTR MaLR -2 547 73 357 231 0 66 chr5 2782910 2783001 -196847149 - L2 LINE L2 0 3313 3229 183 271 17 0 chr5 2784502 2784561 -196845589 - MIR SINE MIR -66 142 83 254 230 0 23 chr5 2784773 2784860 -196845290 + (CATA)n Simple_repeat Simple_repeat 2 86 0 451 262 21 35 chr5 2786122 2786263 -196843887 + MLT1I LTR MaLR 247 385 -24 493 273 83 46 chr5 2786442 2787214 -196842936 + L1MEc LINE L1 2131 2893 -3322 358 182 0 0 chr5 2787245 2787300 -196842850 + Tigger5 DNA MER2_type 1 55 -2268 318 173 13 53 chr5 2787269 2787344 -196842806 + Tigger5 DNA MER2_type 2251 2322 -1 * 238 198 40 69 chr5 2787361 2787462 -196842688 + L1MEc LINE L1 2924 3021 -3194 202 303 174 0 chr5 2787462 2787594 -196842556 - MIR SINE MIR -12 250 96 2686 33 0 3 chr5 2787682 2787989 -196842161 + AluY SINE Alu 1 306 -5 596 264 45 80 chr5 2787999 2788571 -196841579 + L1MEc LINE L1 3469 4020 -2195 35 24 0 0 chr5 2788574 2788616 -196841534 + AT_rich Low_complexity Low_complexity 1 42 0 591 245 54 0 chr5 2788657 2788804 -196841346 + MLT1D LTR MaLR 1 155 -350 976 211 18 22 chr5 2788871 2789094 -196841056 + MLT1D LTR MaLR 271 492 -13 1964 133 7 4 chr5 2789552 2789831 -196840319 + AluSq SINE Alu 1 280 -33 267 31 0 0 chr5 2789831 2789863 -196840287 + (CA)n Simple_repeat Simple_repeat 1 32 0 31 0 0 0 chr5 2790504 2790535 -196839615 + AT_rich Low_complexity Low_complexity 1 31 0 220 386 59 5 chr5 2791217 2791419 -196838731 + MIR SINE MIR 22 234 -28 235 225 33 42 chr5 2791470 2791590 -196838560 + (TATATG)n Simple_repeat Simple_repeat 6 124 0 237 268 28 0 chr5 2791806 2791877 -196838273 + CT-rich Low_complexity Low_complexity 3 75 0 2638 189 34 55 chr5 2791974 2792536 -196837614 - MER52A LTR ERV1 0 1755 1206 1286 227 88 65 chr5 2792509 2792998 -196837152 - MER52A LTR ERV1 -304 1349 531 * 307 264 172 0 chr5 2793022 2793109 -196837041 - MER52A LTR ERV1 -671 1084 983 518 219 233 7 chr5 2793126 2793272 -196836878 - MER52A LTR ERV1 -664 1091 913 3620 198 89 28 chr5 2793340 2794293 -196835857 - MER52A LTR ERV1 -658 1097 1 4138 149 17 8 chr5 2795829 2796534 -196833616 + MER50 LTR ERV1 1 711 -23 717 204 0 0 chr5 2797562 2797714 -196832436 + T-rich Low_complexity Low_complexity 1 152 0 2275 115 3 3 chr5 2797718 2798031 -196832119 - AluSq SINE Alu 0 313 1 22 0 0 0 chr5 2799294 2799316 -196830834 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 2800465 2800485 -196829665 + (CCCCCT)n Simple_repeat Simple_repeat 2 21 0 641 244 0 0 chr5 2801222 2801398 -196828752 + (CTGGGG)n Simple_repeat Simple_repeat 5 180 0 615 241 0 0 chr5 2801465 2801639 -196828511 + (CTGGGG)n Simple_repeat Simple_repeat 3 176 0 584 258 0 0 chr5 2801659 2801837 -196828313 + (CTGGGG)n Simple_repeat Simple_repeat 3 180 0 569 274 6 0 chr5 2801849 2802201 -196827949 + (CTGGGG)n Simple_repeat Simple_repeat 1 354 0 1979 150 7 0 chr5 2803462 2803768 -196826382 - AluSx SINE Alu -4 308 1 28 61 0 0 chr5 2804515 2804564 -196825586 + AT_rich Low_complexity Low_complexity 1 49 0 1297 214 64 113 chr5 2806177 2806691 -196823459 - MLT1E LTR MaLR -4 589 75 2225 125 0 0 chr5 2807311 2807623 -196822527 - AluSx SINE Alu 0 312 1 284 307 83 43 chr5 2807676 2807930 -196822220 + L1MC/D LINE L1 5476 5739 -382 182 132 53 0 chr5 2808423 2808461 -196821689 + CT-rich Low_complexity Low_complexity 1 40 0 266 176 20 0 chr5 2809783 2809834 -196820316 + LTR30 LTR ERV1 1 52 -670 1253 91 37 118 chr5 2809834 2810098 -196820052 + LTR12 LTR ERV1 57 258 -456 305 291 26 0 chr5 2810098 2810215 -196819935 + LTR30 LTR ERV1 524 643 -79 2526 84 0 0 chr5 2810215 2810537 -196819613 + LTR12 LTR ERV1 377 698 -16 1223 177 101 122 chr5 2810541 2810976 -196819174 + MSTA LTR MaLR 3 428 0 533 249 80 127 chr5 2811673 2812075 -196818075 + MLT1C LTR MaLR 1 464 -3 203 256 0 44 chr5 2814184 2814274 -196815876 + (TA)n Simple_repeat Simple_repeat 2 87 0 213 121 0 0 chr5 2815130 2815163 -196814987 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 495 0 0 0 chr5 2817262 2817317 -196812833 + (TA)n Simple_repeat Simple_repeat 1 55 0 2149 111 0 0 chr5 2817316 2817617 -196812533 - AluSg SINE Alu 0 301 1 28 48 0 0 chr5 2817811 2817853 -196812297 + AT_rich Low_complexity Low_complexity 1 42 0 1673 182 88 45 chr5 2818112 2818579 -196811571 + MLT2B1 LTR ERVL 1 487 -33 1791 214 86 34 chr5 2820608 2821132 -196809018 + L1MB7 LINE L1 5634 6184 0 291 365 58 12 chr5 2821475 2821716 -196808434 + MIR SINE MIR 8 259 -3 264 363 7 15 chr5 2822660 2822795 -196807355 + MIR SINE MIR 84 217 -45 2069 112 22 0 chr5 2824286 2824562 -196805588 + AluSg SINE Alu 13 294 -16 3368 224 35 33 chr5 2824779 2825093 -196805057 - L1MB8 LINE L1 -7 6171 5859 2308 101 7 0 chr5 2825093 2825399 -196804751 - AluSx SINE Alu -2 310 3 3368 224 35 33 chr5 2825399 2825962 -196804188 - L1MB8 LINE L1 -319 5859 5298 1930 192 78 2 chr5 2825962 2826358 -196803792 + MSTB LTR MaLR 1 426 0 3368 224 35 33 chr5 2826358 2826893 -196803257 - L1MB8 LINE L1 -880 5298 4747 2472 71 0 7 chr5 2826893 2827203 -196802947 - AluY SINE Alu -3 308 1 3368 224 35 33 chr5 2827203 2827320 -196802830 - L1MB8 LINE L1 -1431 4747 4632 1851 64 0 0 chr5 2827420 2827638 -196802512 + AluY SINE Alu 67 284 -27 217 86 0 0 chr5 2827638 2827673 -196802477 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 32 43 0 0 chr5 2827872 2827918 -196802232 + AT_rich Low_complexity Low_complexity 1 46 0 1524 269 69 18 chr5 2827957 2828563 -196801587 + L1ME2 LINE L1 5291 5927 -237 4666 147 14 13 chr5 2829209 2829985 -196800165 + Tigger1 DNA MER2_type 123 899 -1519 1043 128 24 0 chr5 2830085 2830249 -196799901 + AluSp SINE Alu 103 270 -43 276 77 0 0 chr5 2830252 2830291 -196799859 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 753 321 69 53 chr5 2830375 2830955 -196799195 - L1MC4a LINE L1 -1795 6013 5425 974 232 70 35 chr5 2830980 2831325 -196798825 + MER74B LTR ERVL 261 617 -5 926 236 16 64 chr5 2831328 2831777 -196798373 - L1MC4a LINE L1 -717 5449 5024 226 132 0 26 chr5 2832084 2832122 -196798028 + MLT1L LTR MaLR 579 615 0 192 283 22 0 chr5 2832260 2832306 -196797844 + L2 LINE L2 3267 3313 0 1006 156 0 118 chr5 2833364 2833601 -196796549 - AluJb SINE Alu -19 293 85 2297 248 64 90 chr5 2833994 2834156 -196795994 - L1MC4a LINE L1 -1127 5019 4854 409 159 16 0 chr5 2834156 2834249 -196795901 - AluJ/FRAM SINE Alu 0 314 221 2297 248 64 90 chr5 2834249 2835379 -196794771 - L1MC4a LINE L1 -1292 4854 3699 2303 244 74 53 chr5 2835399 2835646 -196794504 + L1M4 LINE L1 3797 4037 -2109 1942 119 0 14 chr5 2835646 2835981 -196794169 + AluSp SINE Alu 1 331 0 2303 244 74 53 chr5 2835981 2836831 -196793319 + L1M4 LINE L1 4037 4919 -1227 273 298 65 52 chr5 2839359 2839385 -196790765 + HAL1 LINE L1 2254 2278 -229 189 0 0 0 chr5 2839385 2839406 -196790744 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 273 298 65 52 chr5 2839406 2839627 -196790523 + HAL1 LINE L1 2278 2504 -3 231 184 53 13 chr5 2839700 2839776 -196790374 + CT-rich Low_complexity Low_complexity 1 79 0 1081 209 17 120 chr5 2841100 2841507 -196788643 - MLT1A1 LTR MaLR 0 365 1 502 233 194 30 chr5 2841538 2841770 -196788380 + MER5C DNA MER1_type 55 324 0 22 0 0 0 chr5 2842885 2842907 -196787243 + AT_rich Low_complexity Low_complexity 1 22 0 359 276 155 0 chr5 2845241 2845357 -196784793 - MIR SINE MIR -11 251 118 641 149 0 8 chr5 2848197 2848331 -196781819 + (TTCC)n Simple_repeat Simple_repeat 3 135 0 5621 155 21 25 chr5 2848427 2849536 -196780614 - L1MA7 LINE L1 0 6291 5188 5009 172 19 4 chr5 2849529 2850499 -196779651 + L1MA7 LINE L1 4202 5185 -961 * 232 218 35 81 chr5 2852393 2852480 -196777670 + L1ME4a LINE L1 5652 5734 -2074 1878 211 0 0 chr5 2853974 2854320 -196775830 - MER7A DNA MER2_type -1 345 2 2100 93 0 0 chr5 2854421 2854701 -196775449 + AluSx SINE Alu 33 312 0 297 0 0 0 chr5 2854986 2855019 -196775131 + (CA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 2855331 2855356 -196774794 + AT_rich Low_complexity Low_complexity 1 25 0 208 298 18 0 chr5 2858257 2858314 -196771836 + CT-rich Low_complexity Low_complexity 6 63 0 686 309 75 10 chr5 2858924 2859219 -196770931 - L3 LINE CR1 -622 955 642 858 190 0 118 chr5 2859754 2859991 -196770159 - AluJb SINE Alu -19 293 85 180 0 0 0 chr5 2860393 2860413 -196769737 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 288 0 0 0 chr5 2861664 2861696 -196768454 + (TG)n Simple_repeat Simple_repeat 2 33 0 1957 132 0 0 chr5 2863867 2864168 -196765982 - AluSg SINE Alu 0 301 1 24 0 0 0 chr5 2865836 2865860 -196764290 + AT_rich Low_complexity Low_complexity 1 24 0 470 355 52 66 chr5 2865987 2866314 -196763836 + L1MC4a LINE L1 4296 4626 -1520 2148 58 0 11 chr5 2866314 2866588 -196763562 - AluY SINE Alu -40 271 1 470 355 52 66 chr5 2866588 2867142 -196763008 + L1MC4a LINE L1 4626 5165 -981 243 250 8 48 chr5 2867278 2867402 -196762748 + L1MC4a LINE L1 5296 5397 -962 912 230 139 39 chr5 2867575 2868017 -196762133 + MLT1D LTR MaLR 1 378 -12 315 250 40 92 chr5 2868295 2868447 -196761703 + L1MC4a LINE L1 6121 6264 -1544 347 261 69 64 chr5 2868533 2868721 -196761429 + L1ME4a LINE L1 5933 6121 0 23 33 0 0 chr5 2869999 2870029 -196760121 + AT_rich Low_complexity Low_complexity 1 30 0 201 119 24 24 chr5 2871588 2871630 -196758520 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 290 80 60 0 chr5 2871632 2871682 -196758468 - L1MA4 LINE L1 -5 6295 6243 3102 38 0 0 chr5 2871925 2872293 -196757857 - L1PA4 LINE L1 -3 6152 5785 287 242 39 70 chr5 2873305 2873433 -196756717 - LTR16C LTR ERVL -2 489 366 1065 39 0 0 chr5 2876798 2876926 -196753224 + L1PA4 LINE L1 6028 6155 0 614 242 78 47 chr5 2880501 2880895 -196749255 - MLT1C LTR MaLR 0 458 5 1182 214 117 35 chr5 2882677 2882994 -196747156 + MER2 DNA MER2_type 1 343 -1 273 332 124 31 chr5 2883227 2883453 -196746697 - L3 LINE CR1 -1050 527 281 339 312 53 72 chr5 2883499 2883762 -196746388 - MIR SINE MIR -3 259 2 2457 85 0 0 chr5 2888422 2888717 -196741433 - AluSg SINE Alu -15 295 1 21 0 0 0 chr5 2888725 2888746 -196741404 + AT_rich Low_complexity Low_complexity 1 21 0 2219 84 19 22 chr5 2889346 2889657 -196740493 - AluSq SINE Alu -3 310 1 23 0 0 0 chr5 2889692 2889715 -196740435 + AT_rich Low_complexity Low_complexity 1 23 0 2204 133 0 0 chr5 2890871 2891171 -196738979 + AluSq SINE Alu 1 300 -13 595 257 60 6 chr5 2891353 2891536 -196738614 + MIR SINE MIR 67 259 -3 669 232 46 66 chr5 2892204 2892463 -196737687 - MLT1C LTR MaLR 0 467 214 1724 196 33 53 chr5 2892686 2893003 -196737147 + MER65A LTR ERV1 1 308 -137 6222 75 0 1 chr5 2893003 2893831 -196736319 + L1PA7 LINE L1 5346 6154 0 1724 196 33 53 chr5 2893831 2893967 -196736183 + MER65A LTR ERV1 308 445 0 1760 183 36 25 chr5 2895467 2895828 -196734322 - MLT1A1 LTR MaLR 0 365 1 2283 98 0 3 chr5 2895979 2896276 -196733874 + AluSg SINE Alu 1 296 -14 1606 155 66 7 chr5 2896424 2896695 -196733455 + AluJo SINE Alu 7 293 -19 1918 139 28 0 chr5 2899704 2899992 -196730158 - AluSx SINE Alu -16 296 1 228 196 0 20 chr5 2901758 2901809 -196728341 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 2146 114 20 0 chr5 2902199 2902497 -196727653 + AluSx SINE Alu 1 304 -8 202 209 0 0 chr5 2902629 2902672 -196727478 + (CA)n Simple_repeat Simple_repeat 2 44 0 385 181 44 0 chr5 2905757 2905858 -196724292 + L1M4 LINE L1 1024 1275 -5271 24 53 0 0 chr5 2905931 2905969 -196724181 + AT_rich Low_complexity Low_complexity 1 38 0 399 277 80 40 chr5 2906053 2906277 -196723873 + L1ME LINE L1 5590 5822 -299 532 269 83 65 chr5 2906292 2907038 -196723112 + L1M4 LINE L1 1389 2360 -4465 4958 262 58 30 chr5 2907039 2908066 -196722084 + L1M4 LINE L1 2384 3381 -3263 1780 168 28 0 chr5 2908066 2908351 -196721799 - AluJb SINE Alu -18 294 2 4958 262 58 30 chr5 2908351 2909593 -196720557 + L1M4 LINE L1 3381 4686 -1958 2074 253 62 37 chr5 2909713 2910962 -196719188 + L1M4 LINE L1 4930 6222 -440 318 295 103 46 chr5 2911202 2911504 -196718646 + L1M4 LINE L1 2411 2729 -3653 453 194 136 99 chr5 2911688 2911930 -196718220 - MLT1F1 LTR MaLR -209 358 108 496 141 202 10 chr5 2912094 2912193 -196717957 - Tigger1 DNA MER2_type 0 2418 2301 900 181 66 6 chr5 2913389 2913571 -196716579 + MER58 DNA MER1_type 1 193 -148 2184 102 3 10 chr5 2913598 2913893 -196716257 + AluY SINE Alu 1 293 -18 7384 127 23 6 chr5 2913893 2915056 -196715094 - Tigger1 DNA MER2_type -109 2309 1127 1083 223 48 53 chr5 2915156 2915533 -196714617 + MLT1C LTR MaLR 77 451 -16 548 276 65 5 chr5 2915834 2916033 -196714117 - MLT1J LTR MaLR -246 265 55 1519 134 0 0 chr5 2916521 2916737 -196713413 - AluSg/x SINE Alu -1 309 94 236 324 76 34 chr5 2916955 2917217 -196712933 - L1ME LINE L1 -302 5819 5547 1245 204 106 23 chr5 2918311 2918659 -196711491 + MLT1B LTR MaLR 6 382 -8 548 232 132 32 chr5 2919196 2919416 -196710734 + MLT1C LTR MaLR 6 247 -220 1057 202 51 14 chr5 2920543 2920925 -196709225 - MLT1B LTR MaLR -38 352 2 2256 105 0 3 chr5 2920994 2921345 -196708805 + AluSg SINE Alu 1 350 0 1024 174 9 19 chr5 2922397 2922609 -196707541 + L1MA4 LINE L1 6091 6300 0 453 292 97 36 chr5 2922609 2923148 -196707002 + L1MC/D LINE L1 951 1504 -4625 29 47 0 0 chr5 2923374 2923417 -196706733 + AT_rich Low_complexity Low_complexity 1 43 0 297 323 143 37 chr5 2923874 2924179 -196705971 + L1MC/D LINE L1 3457 3818 -2311 2248 99 0 0 chr5 2924179 2924495 -196705655 - AluSx SINE Alu 0 318 3 297 323 143 37 chr5 2924495 2924594 -196705556 + L1MC/D LINE L1 3818 3905 -2224 * 686 252 38 24 chr5 2924581 2924791 -196705359 + L1MD3 LINE L1 7783 7995 0 455 291 166 32 chr5 2924788 2925228 -196704922 + HAL1 LINE L1 1553 2051 -456 * 21 0 0 0 chr5 2925823 2925844 -196704306 + AT_rich Low_complexity Low_complexity 1 21 0 425 308 74 8 chr5 2925953 2926213 -196703937 + L1MC/D LINE L1 5197 5471 -743 717 235 54 0 chr5 2926315 2926519 -196703631 - L1ME3 LINE L1 0 6162 5948 499 197 0 26 chr5 2926641 2926758 -196703392 + L1MB8 LINE L1 6064 6177 -1 1748 212 54 32 chr5 2926797 2927929 -196702221 - L1ME3 LINE L1 -608 5751 4618 231 342 13 0 chr5 2928064 2928143 -196702007 - L2 LINE L2 0 3272 3193 214 349 0 0 chr5 2928502 2928568 -196701582 - L2 LINE L2 0 3313 3248 1309 220 39 62 chr5 2928937 2929373 -196700777 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr5 2931107 2931130 -196699020 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 2933423 2933452 -196696698 + GC_rich Low_complexity Low_complexity 1 29 0 297 237 8 42 chr5 2936488 2936667 -196693483 + G-rich Low_complexity Low_complexity 1 172 0 248 275 0 0 chr5 2936738 2936807 -196693343 + C-rich Low_complexity Low_complexity 2 70 0 200 111 28 0 chr5 2937007 2937043 -196693107 + (CCG)n Simple_repeat Simple_repeat 2 38 0 39 100 0 0 chr5 2937070 2937200 -196692950 + GC_rich Low_complexity Low_complexity 1 130 0 192 40 0 0 chr5 2937410 2937435 -196692715 + (CCG)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 2937530 2937551 -196692599 + GC_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 2937659 2937690 -196692460 + GC_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 2939798 2939826 -196690324 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 2939860 2939881 -196690269 + GC_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr5 2939943 2939992 -196690158 + GC_rich Low_complexity Low_complexity 1 49 0 27 0 0 0 chr5 2940275 2940302 -196689848 + GC_rich Low_complexity Low_complexity 1 27 0 359 164 0 16 chr5 2941287 2941348 -196688802 + L1MC4 LINE L1 6644 6703 -1339 208 162 27 0 chr5 2941349 2941386 -196688764 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 198 0 0 0 chr5 2941850 2941872 -196688278 + (A)n Simple_repeat Simple_repeat 1 22 0 450 0 0 0 chr5 2944498 2944548 -196685602 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr5 2945068 2945103 -196685047 + GC_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr5 2945232 2945269 -196684881 + GC_rich Low_complexity Low_complexity 1 37 0 26 50 0 0 chr5 2945992 2946032 -196684118 + AT_rich Low_complexity Low_complexity 1 40 0 1024 225 61 58 chr5 2951606 2952259 -196677891 - Zaphod DNA AcHobo -20 4011 736 921 140 136 9 chr5 2952968 2953189 -196676961 - L1MC2 LINE L1 0 6344 6096 259 224 0 15 chr5 2953382 2953449 -196676701 - MER53 DNA DNA -120 69 4 1628 180 27 24 chr5 2957510 2957804 -196672346 - AluJo SINE Alu -13 299 5 219 148 16 33 chr5 2958838 2958899 -196671251 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 336 48 0 0 chr5 2959171 2959213 -196670937 + (CA)n Simple_repeat Simple_repeat 2 43 0 211 358 100 0 chr5 2959815 2959935 -196670215 + L2 LINE L2 3133 3264 -8 209 289 107 71 chr5 2960927 2961124 -196669026 - MIR SINE MIR -45 217 14 28 0 0 0 chr5 2961826 2961854 -196668296 + AT_rich Low_complexity Low_complexity 1 28 0 1953 131 0 38 chr5 2964845 2965135 -196665015 + AluSx SINE Alu 1 279 -33 210 71 0 0 chr5 2965137 2965165 -196664985 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr5 2966010 2966033 -196664117 + AT_rich Low_complexity Low_complexity 1 23 0 1471 157 80 44 chr5 2970557 2970711 -196659439 - THE1C LTR MaLR -12 416 269 288 0 0 0 chr5 2970711 2970743 -196659407 + (GA)n Simple_repeat Simple_repeat 1 32 0 1471 157 80 44 chr5 2970743 2970916 -196659234 - THE1C LTR MaLR -159 269 9 315 83 0 21 chr5 2970916 2970964 -196659186 - THE1B LTR MaLR -317 47 1 500 266 137 78 chr5 2971033 2971454 -196658696 - MLT1D LTR MaLR -2 465 27 238 286 12 12 chr5 2971590 2971674 -196658476 + CT-rich Low_complexity Low_complexity 4 87 0 801 236 34 0 chr5 2972173 2972351 -196657799 - MLT1G LTR MaLR -13 577 394 1572 216 18 9 chr5 2972351 2972685 -196657465 + MLT2C1 LTR ERVL 1 337 -60 453 153 201 49 chr5 2972685 2972829 -196657321 - MER4A LTR ERV1 0 465 300 1916 125 38 60 chr5 2972869 2973254 -196656896 - MER4A LTR ERV1 -240 357 2 271 242 15 0 chr5 2973506 2973572 -196656578 - MLT1G LTR MaLR -57 533 467 * 371 337 28 17 chr5 2973568 2973749 -196656401 - MLT1G LTR MaLR -407 183 1 26 0 0 0 chr5 2974257 2974283 -196655867 + AT_rich Low_complexity Low_complexity 1 26 0 627 308 97 21 chr5 2975121 2975628 -196654522 - MLT1G LTR MaLR 0 590 18 216 0 0 0 chr5 2975726 2975750 -196654400 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 3037 155 28 6 chr5 2976083 2976586 -196653564 - MER1A DNA MER1_type 0 529 16 189 147 0 0 chr5 2976711 2976745 -196653405 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 372 399 79 6 chr5 2976748 2977076 -196653074 + L2 LINE L2 2916 3267 -5 1843 179 0 3 chr5 2977356 2977669 -196652481 + AluSx SINE Alu 1 312 0 395 298 47 25 chr5 2978267 2978433 -196651717 - MIR SINE MIR -46 162 34 223 49 49 0 chr5 3029967 3030008 -196600142 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 471 219 0 0 chr5 3030755 3030933 -196599217 + (TG)n Simple_repeat Simple_repeat 2 179 0 404 236 6 0 chr5 3030979 3031157 -196598993 + (TG)n Simple_repeat Simple_repeat 1 179 0 362 214 7 0 chr5 3031192 3031337 -196598813 + (TG)n Simple_repeat Simple_repeat 2 147 0 324 302 82 60 chr5 3032832 3033064 -196597086 - L1M4 LINE L1 -813 5333 5097 988 190 6 0 chr5 3033143 3033317 -196596833 - FRAM SINE Alu -7 169 1 22 0 0 0 chr5 3034945 3034967 -196595183 + AT_rich Low_complexity Low_complexity 1 22 0 2267 110 3 13 chr5 3035091 3035400 -196594750 + AluSx SINE Alu 1 306 -6 212 197 0 33 chr5 3036637 3036698 -196593452 + GA-rich Low_complexity Low_complexity 3 61 0 1920 163 10 7 chr5 3037184 3037490 -196592660 + AluJb SINE Alu 6 312 0 2331 87 3 13 chr5 3038753 3039065 -196591085 - AluY SINE Alu -2 309 1 2113 131 0 0 chr5 3040326 3040652 -196589498 + AluSx SINE Alu 1 326 0 181 286 0 54 chr5 3043682 3043738 -196586412 + MIR SINE MIR 95 145 -63 204 200 0 0 chr5 3044309 3044344 -196585806 - L3 LINE CR1 -994 583 549 27 0 0 0 chr5 3045256 3045283 -196584867 + AT_rich Low_complexity Low_complexity 1 27 0 285 309 51 86 chr5 3045855 3046250 -196583900 + MLT1I LTR MaLR 20 400 -9 182 150 25 0 chr5 3048379 3048419 -196581731 + (TA)n Simple_repeat Simple_repeat 1 41 0 2262 134 10 21 chr5 3048430 3048819 -196581331 + L1PA16 LINE L1 5524 5908 -258 183 80 0 0 chr5 3048819 3048844 -196581306 + (TATATG)n Simple_repeat Simple_repeat 3 27 0 960 36 61 0 chr5 3049497 3049662 -196580488 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 336 393 23 40 chr5 3050098 3050216 -196579934 + L1MC4a LINE L1 5548 5666 -2142 6921 75 6 0 chr5 3050216 3051310 -196578840 + L1PA8 LINE L1 5090 6193 0 336 393 23 40 chr5 3051310 3051544 -196578606 + L1MC4a LINE L1 5666 5895 -1913 304 318 90 42 chr5 3052712 3052901 -196577249 + L1MDa LINE L1 2441 2638 -3902 271 308 91 23 chr5 3053259 3053480 -196576670 - MER106A DNA MER1_type 0 236 1 3565 190 11 22 chr5 3053537 3054169 -196575981 - MER72 LTR ERV1 0 722 98 2216 114 3 19 chr5 3054169 3054486 -196575664 - AluSx SINE Alu 0 312 1 3565 190 11 22 chr5 3054486 3054583 -196575567 - MER72 LTR ERV1 -624 98 1 182 341 11 0 chr5 3056608 3056696 -196573454 - L2 LINE L2 -836 2478 2390 291 114 0 0 chr5 3060652 3060696 -196569454 + (CA)n Simple_repeat Simple_repeat 1 44 0 244 346 57 0 chr5 3063756 3063885 -196566265 - MIR SINE MIR -77 131 16 2193 114 3 7 chr5 3063944 3064250 -196565900 + AluSc SINE Alu 5 309 0 437 279 33 0 chr5 3065710 3065832 -196564318 - MER63 DNA MER1_type -53 783 32 2286 110 0 3 chr5 3070301 3070600 -196559550 - AluY SINE Alu -13 298 1 2059 141 3 0 chr5 3070810 3071108 -196559042 + AluSx SINE Alu 1 299 -13 330 274 109 95 chr5 3071412 3071824 -196558326 - L2 LINE L2 -31 3241 2824 280 302 113 22 chr5 3074823 3075098 -196555052 - LTR16A1 LTR ERVL -2 455 156 243 250 0 0 chr5 3076827 3076887 -196553263 + (CA)n Simple_repeat Simple_repeat 2 61 0 291 247 28 22 chr5 3077129 3077307 -196552843 + (TA)n Simple_repeat Simple_repeat 2 180 0 313 276 57 9 chr5 3077686 3077791 -196552359 + L2 LINE L2 3203 3312 -1 302 236 36 86 chr5 3080726 3080866 -196549284 + MER115 DNA AcHobo 505 637 -56 230 288 14 0 chr5 3080896 3080969 -196549181 - MER63 DNA MER1_type -8 1053 980 2120 125 7 0 chr5 3081929 3082226 -196547924 - AluSx SINE Alu -13 299 1 2349 91 3 9 chr5 3082416 3082745 -196547405 + L1PA8A LINE L1 5798 6124 -7 364 289 112 27 chr5 3084282 3084469 -196545681 - MIR SINE MIR 0 262 60 309 0 0 0 chr5 3085015 3085051 -196545099 + L1PA6 LINE L1 6111 6146 -8 881 209 81 0 chr5 3085067 3085278 -196544872 - MLT2C2 LTR ERVL -236 228 1 642 252 176 56 chr5 3086104 3086497 -196543653 + MLT1F LTR MaLR 85 524 -18 233 320 145 24 chr5 3086632 3086969 -196543181 + L2 LINE L2 2576 2953 -361 2194 92 13 10 chr5 3087318 3087623 -196542527 - AluSc SINE Alu -3 306 1 560 273 136 10 chr5 3087832 3088030 -196542120 + MER58A DNA MER1_type 1 223 -1 188 229 62 0 chr5 3089744 3089792 -196540358 + L2 LINE L2 3222 3272 0 302 276 133 0 chr5 3091225 3091330 -196538820 + L1M4 LINE L1 3039 3157 -2989 * 414 276 115 0 chr5 3091324 3091480 -196538670 + L1M4 LINE L1 3081 3254 -2892 538 266 101 38 chr5 3091580 3091847 -196538303 + L1M4 LINE L1 3579 3862 -2284 229 300 12 0 chr5 3092539 3092619 -196537531 + (TA)n Simple_repeat Simple_repeat 2 82 0 998 254 71 97 chr5 3094793 3096058 -196534092 - L1ME LINE L1 -4602 1659 371 427 341 101 23 chr5 3096252 3096818 -196533332 - L1 LINE L1 -2285 3861 3252 2828 16 0 0 chr5 3096978 3097282 -196532868 - AluYb8 SINE Alu -14 304 1 21 0 0 0 chr5 3097453 3097474 -196532676 + AT_rich Low_complexity Low_complexity 1 21 0 323 325 122 27 chr5 3097580 3098128 -196532022 - L1 LINE L1 -3381 2765 2166 384 338 55 55 chr5 3098684 3099027 -196531123 - HAL1b LINE L1 -710 638 296 1841 113 7 25 chr5 3099158 3099433 -196530717 - AluSq SINE Alu -39 274 5 284 284 61 34 chr5 3100136 3100284 -196529866 + L1ME LINE L1 5533 5684 -437 35 0 0 0 chr5 3100325 3100360 -196529790 + AT_rich Low_complexity Low_complexity 1 35 0 329 272 22 0 chr5 3100587 3100679 -196529471 - L1MC4 LINE L1 -1338 6704 6611 440 205 6 0 chr5 3101355 3101511 -196528639 + (TG)n Simple_repeat Simple_repeat 1 157 0 486 213 0 0 chr5 3101524 3101684 -196528466 + (TG)n Simple_repeat Simple_repeat 2 161 0 294 222 81 0 chr5 3101687 3101786 -196528364 + (TCTG)n Simple_repeat Simple_repeat 4 110 0 566 188 0 6 chr5 3101791 3101972 -196528178 + (TG)n Simple_repeat Simple_repeat 1 180 0 342 249 0 0 chr5 3101996 3102169 -196527981 + (TG)n Simple_repeat Simple_repeat 2 174 0 385 152 22 43 chr5 3102885 3103069 -196527081 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 306 45 18 chr5 3105537 3105648 -196524502 + MER5A DNA MER1_type 1 114 -75 2369 95 0 0 chr5 3105714 3106020 -196524130 - AluSx SINE Alu -6 306 1 405 39 0 0 chr5 3106709 3106760 -196523390 + (TC)n Simple_repeat Simple_repeat 2 52 0 926 301 36 40 chr5 3108387 3108836 -196521314 - MLT1E3 LTR MaLR -12 612 166 717 207 4 0 chr5 3110502 3110772 -196519378 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 1622 272 42 27 chr5 3112725 3113272 -196516878 + MLT1H1 LTR MaLR 1 555 0 287 248 91 16 chr5 3113463 3113584 -196516566 + MIR SINE MIR 85 214 -48 1385 142 0 0 chr5 3113630 3113827 -196516323 - AluSc SINE Alu -16 293 97 5603 87 1 20 chr5 3114634 3115443 -196514707 + L1PA8A LINE L1 5331 6124 -7 504 48 0 0 chr5 3116626 3116689 -196513461 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1170 117 0 0 chr5 3116689 3116868 -196513282 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 763 133 7 14 chr5 3116873 3117016 -196513134 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 378 42 0 0 chr5 3117293 3117341 -196512809 + (CA)n Simple_repeat Simple_repeat 2 49 0 396 167 0 0 chr5 3118940 3119012 -196511138 + (TG)n Simple_repeat Simple_repeat 1 72 0 1472 201 30 0 chr5 3120859 3121163 -196508987 - MLT1B LTR MaLR -7 383 71 482 151 28 38 chr5 3121187 3121293 -196508857 - MLT1B LTR MaLR -272 118 14 342 204 39 107 chr5 3122861 3122964 -196507186 - L1ME1 LINE L1 0 6444 6349 1831 232 71 55 chr5 3123046 3124579 -196505571 - L1ME1 LINE L1 -77 6369 4589 1886 283 46 10 chr5 3124708 3125387 -196504763 - L1ME1 LINE L1 -2163 4263 3561 238 184 20 0 chr5 3125386 3125435 -196504715 + L1MCc LINE L1 823 872 -5551 * 291 312 102 24 chr5 3126372 3126455 -196503695 - MIR SINE MIR -40 222 147 192 77 0 0 chr5 3126455 3126481 -196503669 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 291 312 102 24 chr5 3126481 3126602 -196503548 - MIR SINE MIR -115 147 2 457 323 54 40 chr5 3128551 3128848 -196501302 - L1ME1 LINE L1 -3518 2908 2608 1896 152 3 0 chr5 3129320 3129617 -196500533 - AluJb SINE Alu -14 298 1 491 259 127 33 chr5 3129673 3130008 -196500142 - L1ME1 LINE L1 -3842 2584 2214 380 321 123 51 chr5 3130210 3130751 -196499399 - L1ME1 LINE L1 -753 2034 1451 1910 137 3 0 chr5 3130978 3131270 -196498880 + AluSq SINE Alu 1 293 -20 3574 65 9 2 chr5 3131607 3132068 -196498082 - L1PA8 LINE L1 -1 6171 5708 322 296 80 24 chr5 3132654 3132779 -196497371 - L1ME1 LINE L1 -5952 464 333 199 254 30 45 chr5 3134001 3134068 -196496082 + L2 LINE L2 3247 3312 -1 308 237 50 101 chr5 3134890 3135029 -196495121 + LTR33A LTR ERVL 61 192 -331 2242 32 43 11 chr5 3136395 3136705 -196493445 - AluY SINE Alu 0 311 3 249 108 0 0 chr5 3138250 3138287 -196491863 + (A)n Simple_repeat Simple_repeat 1 37 0 232 211 62 62 chr5 3139513 3139641 -196490509 - L1ME4a LINE L1 0 6121 5994 427 389 70 18 chr5 3142561 3142960 -196487190 + L1ME2 LINE L1 376 795 -5926 438 251 61 110 chr5 3143464 3144216 -196485934 + L1ME2 LINE L1 1191 1838 -4704 287 274 14 0 chr5 3144421 3144494 -196485656 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 448 286 59 11 chr5 3144726 3145058 -196485092 + L1ME2 LINE L1 2399 2749 -3791 774 172 55 43 chr5 3145097 3145260 -196484890 + FRAM SINE Alu 1 156 -20 388 235 10 10 chr5 3145260 3145358 -196484792 + L1ME2 LINE L1 5564 5661 -879 199 200 13 13 chr5 3145361 3145436 -196484714 + (TA)n Simple_repeat Simple_repeat 1 75 0 2219 283 52 27 chr5 3145478 3146340 -196483810 + L1ME2 LINE L1 5660 6549 -9 364 223 157 16 chr5 3147910 3148031 -196482119 - L2 LINE L2 0 3313 3176 362 270 92 58 chr5 3148167 3148664 -196481486 - MLT1G1 LTR MaLR -90 452 2 412 245 90 58 chr5 3148735 3148890 -196481260 - MIR SINE MIR -17 245 86 185 280 118 11 chr5 3150798 3150891 -196479259 - L2 LINE L2 -145 3127 3025 1659 125 131 41 chr5 3151590 3151934 -196478216 + THE1C LTR MaLR 1 375 0 1523 195 13 10 chr5 3152733 3153041 -196477109 - AluJb SINE Alu -3 309 1 473 289 84 4 chr5 3154070 3154319 -196475831 - Charlie5 DNA MER1_type 0 2620 2352 469 246 27 77 chr5 3154318 3154501 -196475649 - Charlie5 DNA MER1_type -2413 199 26 * 194 180 0 60 chr5 3155796 3155896 -196474254 + (CA)n Simple_repeat Simple_repeat 1 94 0 433 257 6 39 chr5 3155961 3156140 -196474010 + (CA)n Simple_repeat Simple_repeat 1 173 0 336 272 16 38 chr5 3156313 3156497 -196473653 + (CA)n Simple_repeat Simple_repeat 1 180 0 315 256 0 0 chr5 3157396 3157486 -196472664 + (TGGA)n Simple_repeat Simple_repeat 4 93 0 932 183 7 0 chr5 3157502 3157798 -196472352 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 180 176 0 0 chr5 3157816 3157850 -196472300 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 809 185 6 0 chr5 3157870 3158043 -196472107 + (TAGA)n Simple_repeat Simple_repeat 3 176 0 351 0 0 0 chr5 3158361 3158400 -196471750 + (TG)n Simple_repeat Simple_repeat 2 40 0 673 187 49 76 chr5 3161299 3161524 -196468626 + MER20 DNA MER1_type 1 219 0 302 123 37 25 chr5 3161945 3162026 -196468124 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 1654 225 77 64 chr5 3163077 3163543 -196466607 + MLT1H1 LTR MaLR 16 491 -64 1930 135 14 0 chr5 3163543 3163839 -196466311 - AluSx SINE Alu -12 300 1 1654 225 77 64 chr5 3163839 3163905 -196466245 + MLT1H1 LTR MaLR 491 555 0 379 318 19 7 chr5 3164049 3164203 -196465947 + MER112 DNA MER1_type 97 252 -8 407 213 7 0 chr5 3165462 3165603 -196464547 + (TG)n Simple_repeat Simple_repeat 1 142 0 759 176 0 2 chr5 3165620 3166224 -196463926 + (TG)n Simple_repeat Simple_repeat 1 602 0 701 175 4 0 chr5 3166237 3166495 -196463655 + (TG)n Simple_repeat Simple_repeat 1 259 0 188 365 73 10 chr5 3169112 3169208 -196460942 - MIR SINE MIR -159 103 2 5555 168 21 10 chr5 3169435 3170468 -196459682 - L1MA6 LINE L1 0 6300 5256 440 266 35 53 chr5 3170468 3170637 -196459513 + MER5B DNA MER1_type 8 173 -5 2062 193 29 60 chr5 3170713 3170910 -196459240 + MER82 DNA MER2_type 1 203 -450 2110 160 30 0 chr5 3170910 3171248 -196458902 + MER7A DNA MER2_type 1 346 0 2062 193 29 60 chr5 3171248 3171531 -196458619 + MER82 DNA MER2_type 203 466 -187 698 211 18 4 chr5 3171569 3172037 -196458113 + (CA)n Simple_repeat Simple_repeat 1 474 0 587 159 34 28 chr5 3172020 3172196 -196457954 + (CATA)n Simple_repeat Simple_repeat 2 178 0 * 688 274 93 13 chr5 3172892 3173202 -196456948 + MER93b LTR ERV1 39 373 0 1596 195 139 0 chr5 3175099 3175473 -196454677 - MSTA LTR MaLR -2 426 1 2134 80 35 0 chr5 3175864 3176151 -196453999 + AluSp SINE Alu 1 297 -16 2058 119 13 0 chr5 3177269 3177572 -196452578 + AluSx SINE Alu 1 307 -5 228 75 0 50 chr5 3178567 3178607 -196451543 - MLT1J1 LTR MaLR -125 321 284 573 239 16 38 chr5 3179458 3179642 -196450508 + L1MA10 LINE L1 6108 6287 -47 1405 229 38 15 chr5 3182868 3183208 -196446942 + MER7A DNA MER2_type 1 346 0 362 288 48 78 chr5 3183277 3183496 -196446654 - MIR SINE MIR -34 228 19 423 0 0 0 chr5 3183708 3183755 -196446395 + (TG)n Simple_repeat Simple_repeat 2 48 0 32 43 0 0 chr5 3184060 3184106 -196446044 + AT_rich Low_complexity Low_complexity 1 46 0 316 57 0 38 chr5 3184887 3184940 -196445210 + (TCCCG)n Simple_repeat Simple_repeat 3 53 0 591 127 25 0 chr5 3184963 3185081 -196445069 + CT-rich Low_complexity Low_complexity 3 123 0 1530 100 8 34 chr5 3185089 3185328 -196444822 - AluSg/x SINE Alu -6 306 74 581 185 0 22 chr5 3185689 3185873 -196444277 + CT-rich Low_complexity Low_complexity 1 180 0 228 294 0 0 chr5 3186537 3186656 -196443494 + (CA)n Simple_repeat Simple_repeat 1 119 0 190 299 28 47 chr5 3186703 3186810 -196443340 + L2 LINE L2 1831 1935 -1379 357 247 0 0 chr5 3187790 3187871 -196442279 - MLT1D LTR MaLR 0 505 425 196 222 97 28 chr5 3187997 3188069 -196442081 - MIR SINE MIR -97 165 89 852 203 0 0 chr5 3188124 3188465 -196441685 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 765 194 0 0 chr5 3188485 3188655 -196441495 + (TGGA)n Simple_repeat Simple_repeat 1 170 0 902 181 0 3 chr5 3188673 3189038 -196441112 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 1146 188 0 0 chr5 3189058 3189405 -196440745 + (TGGA)n Simple_repeat Simple_repeat 1 347 0 214 280 40 0 chr5 3190108 3190158 -196439992 + MER5B DNA MER1_type 125 176 -2 2372 81 0 0 chr5 3190250 3190560 -196439590 - AluY SINE Alu -1 310 1 324 284 193 25 chr5 3192252 3192495 -196437655 - L2 LINE L2 -1242 2072 1789 228 309 118 58 chr5 3192921 3193267 -196436883 - L2 LINE L2 -1758 1556 1190 221 273 191 22 chr5 3193343 3193574 -196436576 - L2 LINE L2 -2311 1003 734 1990 122 0 0 chr5 3195443 3195730 -196434420 + AluSx SINE Alu 11 297 -15 1771 147 0 10 chr5 3196097 3196390 -196433760 + AluJb SINE Alu 1 290 -22 2492 110 31 8 chr5 3197878 3198234 -196431916 - THE1B LTR MaLR 0 364 1 1071 224 113 36 chr5 3198307 3198642 -196431508 - MLT1A1 LTR MaLR -2 363 3 403 253 121 91 chr5 3198927 3199267 -196430883 - MLT1I LTR MaLR 0 409 60 226 271 17 0 chr5 3199374 3199433 -196430717 - MIR SINE MIR -171 91 32 1713 191 34 8 chr5 3201782 3202138 -196428012 + MLT1A1 LTR MaLR 1 365 0 303 298 116 56 chr5 3202327 3202525 -196427625 + L1M4 LINE L1 3770 3979 -2167 266 288 34 20 chr5 3202657 3202803 -196427347 + L1M4 LINE L1 4128 4275 -1871 27 29 0 0 chr5 3203364 3203398 -196426752 + AT_rich Low_complexity Low_complexity 1 34 0 1113 163 128 0 chr5 3203407 3203665 -196426485 - MER33 DNA MER1_type -1 323 33 475 327 24 6 chr5 3204104 3204272 -196425878 + MIR SINE MIR 46 216 -46 250 250 0 0 chr5 3205486 3205542 -196424608 + (CA)n Simple_repeat Simple_repeat 2 57 0 21 82 0 0 chr5 3206109 3206158 -196423992 + AT_rich Low_complexity Low_complexity 1 49 0 1186 239 34 34 chr5 3206308 3206664 -196423486 - MLT1A2 LTR MaLR 0 374 19 23 0 0 0 chr5 3208290 3208313 -196421837 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 3208721 3208742 -196421408 + (TAA)n Simple_repeat Simple_repeat 2 22 0 407 306 19 19 chr5 3208744 3208901 -196421249 - MIR SINE MIR -11 251 95 297 276 14 55 chr5 3209036 3209181 -196420969 + (CATG)n Simple_repeat Simple_repeat 2 140 0 214 406 6 6 chr5 3209243 3209418 -196420732 + (CA)n Simple_repeat Simple_repeat 1 175 0 22 0 0 0 chr5 3210641 3210663 -196419487 + AT_rich Low_complexity Low_complexity 1 22 0 950 180 6 0 chr5 3210733 3210925 -196419225 - AluSx SINE Alu 0 313 121 568 176 0 0 chr5 3210961 3211052 -196419098 - AluSx SINE Alu -180 133 43 261 358 84 28 chr5 3213865 3214044 -196416106 + L3 LINE CR1 1246 1434 -143 897 211 40 44 chr5 3214366 3214593 -196415557 - ORSL DNA AcHobo -14 261 36 331 307 35 9 chr5 3215847 3215961 -196414189 - L1M4 LINE L1 -846 5798 5682 533 267 87 46 chr5 3215997 3216083 -196414067 - L1MEc LINE L1 -1784 4860 4779 1828 163 0 0 chr5 3216083 3216383 -196413767 - AluSx SINE Alu -12 300 1 533 267 87 46 chr5 3216383 3216491 -196413659 - L1MEc LINE L1 -1865 4779 4658 319 295 27 54 chr5 3216523 3216859 -196413291 - L1MEc LINE L1 -2063 4581 4255 619 244 93 136 chr5 3216865 3217126 -196413024 - L1MEc LINE L1 -2610 4034 3764 222 37 0 0 chr5 3217126 3217153 -196412997 + (TC)n Simple_repeat Simple_repeat 2 28 0 619 244 93 136 chr5 3217153 3217513 -196412637 - L1MEc LINE L1 -2880 3764 3472 4313 56 9 0 chr5 3217513 3218051 -196412099 + L1PA5 LINE L1 5612 6154 0 619 244 93 136 chr5 3218051 3218476 -196411674 - L1MEc LINE L1 -3172 3472 3031 1834 138 17 3 chr5 3218476 3218765 -196411385 + AluSq SINE Alu 1 293 -20 857 232 103 21 chr5 3218871 3219250 -196410900 - L1MEc LINE L1 -3940 2706 2297 1226 198 154 31 chr5 3219366 3219684 -196410466 - MLT1A1 LTR MaLR 0 365 9 357 144 36 18 chr5 3219684 3219795 -196410355 + (TA)n Simple_repeat Simple_repeat 2 114 0 5172 249 46 36 chr5 3219795 3221845 -196408305 - L1M4 LINE L1 -4565 2081 5 242 264 100 27 chr5 3221863 3221973 -196408177 - L1MEc LINE L1 -4766 2059 1942 284 298 53 11 chr5 3222119 3222213 -196407937 + MER20B DNA MER1_type 62 159 -624 2105 111 0 0 chr5 3224354 3224652 -196405498 + AluSg SINE Alu 1 298 -12 295 245 11 21 chr5 3226116 3226210 -196403940 + CT-rich Low_complexity Low_complexity 2 94 0 1085 239 77 11 chr5 3227479 3227830 -196402320 + MLT1A2 LTR MaLR 1 374 0 623 254 172 67 chr5 3227956 3228404 -196401746 - L1ME4a LINE L1 -6 6115 5621 2258 92 7 0 chr5 3230483 3230789 -196399361 - AluY SINE Alu -3 308 1 407 348 13 25 chr5 3230921 3231079 -196399071 - MIR SINE MIR -52 210 55 677 251 67 5 chr5 3231124 3231319 -196398831 - MER20 DNA MER1_type -5 214 8 187 255 0 43 chr5 3231606 3231653 -196398497 + L3 LINE CR1 642 686 -891 2506 96 19 25 chr5 3232072 3232438 -196397712 + THE1B LTR MaLR 1 364 0 253 260 53 60 chr5 3232742 3232892 -196397258 - MIR SINE MIR -54 208 60 27 0 0 0 chr5 3234537 3234564 -196395586 + AT_rich Low_complexity Low_complexity 1 27 0 1260 206 29 29 chr5 3238784 3239129 -196391021 - MLT1C LTR MaLR -42 425 81 243 269 0 0 chr5 3239303 3239433 -196390717 + (CA)n Simple_repeat Simple_repeat 1 130 0 282 292 0 0 chr5 3239462 3239640 -196390510 + (CA)n Simple_repeat Simple_repeat 1 178 0 435 38 0 0 chr5 3240891 3240944 -196389206 + (TG)n Simple_repeat Simple_repeat 2 54 0 193 311 58 19 chr5 3241588 3241691 -196388459 + L2 LINE L2 3155 3261 -11 237 33 0 0 chr5 3243015 3243045 -196387105 + (CA)n Simple_repeat Simple_repeat 1 30 0 279 200 0 0 chr5 3244296 3244346 -196385804 - tRNA-Gly-GGA tRNA tRNA -25 50 1 720 176 0 2 chr5 3244763 3245369 -196384781 + (TG)n Simple_repeat Simple_repeat 1 604 0 725 150 0 6 chr5 3245388 3245555 -196384595 + (TG)n Simple_repeat Simple_repeat 2 167 0 370 267 19 0 chr5 3246361 3246466 -196383684 - L2 LINE L2 -8 3305 3199 30 27 0 0 chr5 3246549 3246586 -196383564 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 3246825 3246853 -196383297 + AT_rich Low_complexity Low_complexity 1 28 0 284 213 16 16 chr5 3247102 3247163 -196382987 + MER81 DNA DNA 54 114 0 229 327 89 12 chr5 3247552 3247800 -196382350 + L1ME3A LINE L1 4949 5215 -931 424 321 198 33 chr5 3247964 3248328 -196381822 + L1ME3A LINE L1 5411 5834 -336 1014 209 87 0 chr5 3248332 3248528 -196381622 + MER58A DNA MER1_type 1 213 -11 1873 194 65 7 chr5 3249224 3249627 -196380523 + MER95 LTR ERV 6 431 0 437 283 62 24 chr5 3249816 3250210 -196379940 - LTR16A LTR ERVL -1 449 2 2016 138 0 0 chr5 3250832 3251130 -196379020 + AluSx SINE Alu 1 298 -14 248 241 0 0 chr5 3251322 3251376 -196378774 - L1M4 LINE L1 -1324 4822 4769 2090 95 20 10 chr5 3252828 3253124 -196377026 + AluSq SINE Alu 1 299 -14 2388 61 0 26 chr5 3253146 3253457 -196376693 - AluY SINE Alu -7 304 2 255 337 119 42 chr5 3253630 3253915 -196376235 - L3 LINE CR1 -713 864 558 2248 73 7 3 chr5 3254758 3255058 -196375092 + AluY SINE Alu 1 301 -10 1132 251 46 28 chr5 3256526 3256893 -196373257 - MER96B DNA MER1_type? -4 413 40 436 240 21 0 chr5 3256893 3256989 -196373161 + MLT1C LTR MaLR 1 98 -369 2104 197 47 11 chr5 3256989 3257461 -196372689 + L1MA6 LINE L1 5483 5971 -329 245 275 65 58 chr5 3257641 3257779 -196372371 + MIR SINE MIR 109 247 -15 258 81 0 0 chr5 3258091 3258128 -196372022 + (TG)n Simple_repeat Simple_repeat 2 38 0 1430 225 38 3 chr5 3261577 3261924 -196368226 - L1MB4 LINE L1 -1 6179 5821 848 169 6 0 chr5 3262941 3263119 -196367031 + (ATG)n Simple_repeat Simple_repeat 2 180 0 737 202 6 0 chr5 3263150 3263508 -196366642 + (ATG)n Simple_repeat Simple_repeat 1 360 0 213 196 0 0 chr5 3263524 3263570 -196366580 + (ATG)n Simple_repeat Simple_repeat 1 46 0 185 235 0 0 chr5 3263588 3263622 -196366528 - L2 LINE L2 -19 3294 3261 230 0 33 0 chr5 3265627 3265657 -196364493 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 317 259 95 41 chr5 3265935 3266211 -196363939 + L1ME LINE L1 1072 1374 -5156 2365 38 10 0 chr5 3266211 3266503 -196363647 + AluY SINE Alu 1 295 -16 317 259 95 41 chr5 3266503 3266593 -196363557 + L1ME LINE L1 1374 1458 -5072 235 188 50 38 chr5 3266594 3266674 -196363476 + L1ME LINE L1 1361 1441 -5099 1968 143 10 0 chr5 3268613 3268907 -196361243 + AluSx SINE Alu 1 297 -15 189 269 88 81 chr5 3271124 3271284 -196358866 + MIR SINE MIR 102 262 0 186 43 0 0 chr5 3272690 3272713 -196357437 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 537 259 131 27 chr5 3274364 3274397 -196355753 - MER5C DNA MER1_type 0 324 296 362 21 21 0 chr5 3274397 3274444 -196355706 + (TG)n Simple_repeat Simple_repeat 2 49 0 537 259 131 27 chr5 3274444 3274669 -196355481 - MER5C DNA MER1_type -28 296 39 291 262 74 50 chr5 3275969 3276155 -196353995 + MIR3 SINE MIR 4 195 -63 394 305 92 0 chr5 3276514 3276655 -196353495 + MIR3 SINE MIR 18 171 -37 250 285 82 70 chr5 3277074 3277232 -196352918 + MIR SINE MIR 61 220 -42 238 217 0 0 chr5 3278341 3278387 -196351763 - L2 LINE L2 -1 3312 3267 301 253 129 93 chr5 3278820 3279045 -196351105 + L1ME LINE L1 2315 2547 -3993 4387 257 91 25 chr5 3279065 3281097 -196349053 + L1ME LINE L1 2472 4590 -1950 575 293 124 18 chr5 3282218 3282443 -196347707 - MIR SINE MIR 0 262 14 1809 123 8 0 chr5 3282596 3282839 -196347311 - AluSq SINE Alu -64 249 5 2155 120 0 13 chr5 3283493 3283802 -196346348 - AluSx SINE Alu -7 305 1 3733 178 22 38 chr5 3285829 3286611 -196343539 - LTR1 LTR ERV1 0 785 17 186 71 0 0 chr5 3288372 3288400 -196341750 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 574 214 41 0 chr5 3288526 3288705 -196341445 - L1MB3 LINE L1 -219 5952 5754 2062 139 0 16 chr5 3288738 3289048 -196341102 + AluSc SINE Alu 1 305 -4 2268 177 46 15 chr5 3294798 3295273 -196334877 - L1M2 LINE L1 -500 5812 5323 457 242 105 26 chr5 3295291 3295599 -196334551 - L1MCa LINE L1 -3862 2564 2221 1848 144 58 0 chr5 3295599 3295715 -196334435 + AluSx SINE Alu 2 110 -202 222 37 0 0 chr5 3295715 3295742 -196334408 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1848 144 58 0 chr5 3295742 3295903 -196334247 + AluSx SINE Alu 110 295 -17 457 242 105 26 chr5 3295903 3295975 -196334175 - L1MCa LINE L1 -4205 2221 2156 317 260 135 10 chr5 3295976 3296080 -196334070 - L1 LINE L1 -944 5202 5086 834 179 5 58 chr5 3296085 3296185 -196333965 + L1 LINE L1 5171 5275 -871 2034 152 10 0 chr5 3296185 3296482 -196333668 + AluSx SINE Alu 1 300 -12 834 179 5 58 chr5 3296482 3296604 -196333546 + L1 LINE L1 5275 5381 -765 1822 160 30 3 chr5 3296604 3296936 -196333214 - MER6 DNA MER2_type 0 865 265 466 248 185 57 chr5 3296936 3296974 -196333176 - L1MCa LINE L1 -5992 434 402 1376 158 153 78 chr5 3296974 3297321 -196332829 + THE1C LTR MaLR 1 373 -2 466 248 185 57 chr5 3297321 3297649 -196332501 - L1MCa LINE L1 -6024 402 21 1986 144 48 17 chr5 3297718 3298073 -196332077 + MER47A DNA MER2_type 1 366 0 2243 116 20 0 chr5 3298533 3298834 -196331316 - AluSc SINE Alu -2 307 1 2197 132 28 25 chr5 3299861 3300216 -196329934 - THE1B LTR MaLR 0 364 9 11493 94 18 11 chr5 3300224 3301555 -196328595 - THE1B-int LTR MaLR 0 1580 235 2331 62 0 0 chr5 3301555 3301828 -196328322 - AluY SINE Alu -12 299 27 11493 94 18 11 chr5 3301828 3302065 -196328085 - THE1B-int LTR MaLR -1345 235 1 2392 126 36 22 chr5 3302066 3302424 -196327726 - THE1B LTR MaLR -1 363 1 222 91 0 0 chr5 3304283 3304316 -196325834 + (TCC)n Simple_repeat Simple_repeat 2 34 0 319 111 0 0 chr5 3305283 3305328 -196324822 - THE1B LTR MaLR 0 428 384 1012 87 24 0 chr5 3305328 3305455 -196324695 + AluSq/x SINE Alu 1 130 -182 204 326 84 0 chr5 3306081 3306176 -196323974 + MER5A DNA MER1_type 4 106 -83 182 320 100 10 chr5 3306951 3307051 -196323099 + L2 LINE L2 3150 3258 -14 418 226 0 57 chr5 3307151 3307275 -196322875 - MIR SINE MIR -56 206 90 242 265 39 29 chr5 3309825 3309927 -196320223 + HAL1 LINE L1 769 871 -1636 531 250 5 75 chr5 3309927 3310139 -196320011 + MER3 DNA MER1_type 13 209 0 368 367 29 0 chr5 3310174 3310313 -196319837 + HAL1 LINE L1 1678 1820 -687 553 241 4 12 chr5 3310358 3310625 -196319525 + GA-rich Low_complexity Low_complexity 1 264 0 215 77 0 26 chr5 3310744 3310783 -196319367 + (TG)n Simple_repeat Simple_repeat 2 39 0 276 209 88 0 chr5 3311159 3311250 -196318900 + MER5A DNA MER1_type 26 124 -65 474 300 106 34 chr5 3313319 3314024 -196316126 - L2 LINE L2 -188 3125 2370 289 271 74 25 chr5 3317720 3317842 -196312308 - LTR68 LTR ERV1 -606 134 7 185 0 0 39 chr5 3319081 3319107 -196311043 + (CAGA)n Simple_repeat Simple_repeat 1 25 0 1538 214 30 32 chr5 3321479 3321852 -196308298 + MLT1A2 LTR MaLR 3 374 0 432 245 91 22 chr5 3321893 3322093 -196308057 - MLT1H LTR MaLR -294 255 1 4781 201 49 19 chr5 3322137 3322729 -196307421 - L1MC2 LINE L1 -9 6335 5762 2044 128 34 0 chr5 3322729 3323025 -196307125 + AluSx SINE Alu 1 306 -6 4781 201 49 19 chr5 3323025 3323733 -196306417 - L1MC2 LINE L1 -582 5762 4985 558 248 14 7 chr5 3323760 3323901 -196306249 - MER69A DNA AcHobo -33 144 3 513 0 0 0 chr5 3325163 3325220 -196304930 + (TC)n Simple_repeat Simple_repeat 2 58 0 375 23 0 0 chr5 3325219 3325263 -196304887 + (TA)n Simple_repeat Simple_repeat 1 44 0 * 2569 147 19 9 chr5 3325271 3325590 -196304560 - L1PA16 LINE L1 -21 6145 5820 2347 138 5 22 chr5 3325590 3325960 -196304190 + THE1B LTR MaLR 1 364 0 2569 147 19 9 chr5 3325960 3326062 -196304088 - L1PA16 LINE L1 -346 5820 5720 1707 105 23 11 chr5 3328017 3328283 -196301867 - AluSq SINE Alu -12 301 33 183 186 0 0 chr5 3329708 3329751 -196300399 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 3530 76 2 0 chr5 3329784 3330242 -196299908 + L1PA5 LINE L1 5694 6152 -2 2570 83 9 0 chr5 3330242 3330583 -196299567 + L1PA8 LINE L1 5814 6166 -6 424 343 17 14 chr5 3333766 3334131 -196296019 + (TG)n Simple_repeat Simple_repeat 1 366 0 267 223 21 98 chr5 3334105 3334298 -196295852 + (CATG)n Simple_repeat Simple_repeat 1 178 0 * 345 331 23 17 chr5 3334244 3334416 -196295734 + (TG)n Simple_repeat Simple_repeat 2 174 0 2052 104 0 7 chr5 3335466 3335788 -196294362 - AluSq SINE Alu 0 313 1 392 188 12 47 chr5 3336186 3336271 -196293879 - MER5A DNA MER1_type -83 106 25 275 346 115 6 chr5 3337063 3337219 -196292931 - MER5B DNA MER1_type -3 175 3 202 196 39 0 chr5 3337779 3337830 -196292320 + A-rich Low_complexity Low_complexity 4 56 0 3176 262 31 35 chr5 3338272 3339832 -196290318 + L1MA7 LINE L1 1 1672 -4609 9272 203 43 9 chr5 3339835 3342378 -196287772 + L1MA7 LINE L1 2902 5608 -771 1891 170 40 37 chr5 3342378 3342779 -196287371 + L1MA7 LINE L1 6094 6495 0 9272 203 43 9 chr5 3342779 3342797 -196287353 + L1MA7 LINE L1 5608 5624 -755 183 374 94 6 chr5 3343195 3343366 -196286784 - L2 LINE L2 -459 2855 2670 408 317 45 60 chr5 3343544 3343897 -196286253 - L2 LINE L2 -927 2387 2040 243 261 0 14 chr5 3344205 3344274 -196285876 + GA-rich Low_complexity Low_complexity 2 69 0 445 287 125 37 chr5 3345340 3345556 -196284594 - MIR SINE MIR -6 256 22 2069 250 70 14 chr5 3345594 3346151 -196283999 - MLT1E LTR MaLR -5 588 1 734 148 22 44 chr5 3346421 3346556 -196283594 - FLAM_C SINE Alu -10 133 2 264 213 0 0 chr5 3348625 3348672 -196281478 - L2 LINE L2 -7 3265 3219 215 91 0 23 chr5 3351392 3351436 -196278714 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1164 244 75 49 chr5 3351776 3352227 -196277923 - MLT1C LTR MaLR -4 463 1 417 301 70 21 chr5 3352294 3352480 -196277670 - L1M4 LINE L1 -1496 4886 4692 706 160 92 23 chr5 3352492 3352623 -196277527 + THE1C LTR MaLR 1 140 -235 2822 174 8 4 chr5 3352650 3353161 -196276989 + HSMAR2 DNA Mariner 169 681 -621 228 117 33 17 chr5 3353225 3353285 -196276865 + (TA)n Simple_repeat Simple_repeat 2 62 0 972 215 59 19 chr5 3353309 3353565 -196276585 - L1MA9 LINE L1 -39 6273 6008 * 1560 275 81 67 chr5 3353562 3354174 -196275976 - L1M4 LINE L1 -3884 2500 1898 1870 142 0 4 chr5 3354174 3354455 -196275695 + AluSx SINE Alu 3 282 -30 1560 275 81 67 chr5 3354455 3355017 -196275133 - L1M4 LINE L1 -4486 1898 1345 1886 154 0 0 chr5 3355017 3355310 -196274840 - AluSx SINE Alu -19 293 1 1560 275 81 67 chr5 3355310 3355864 -196274286 - L1M4 LINE L1 -5039 1345 747 365 275 118 55 chr5 3356038 3356384 -196273766 - L1MEd LINE L1 -1193 1297 1003 6871 253 67 12 chr5 3356434 3358032 -196272118 + L1PA13 LINE L1 1 1685 -5896 8291 244 35 25 chr5 3358050 3360284 -196269866 + L1PA13 LINE L1 2461 4725 -2859 2106 119 0 6 chr5 3360284 3360596 -196269554 + AluSx SINE Alu 1 310 -2 8291 244 35 25 chr5 3360596 3360910 -196269240 + L1PA13 LINE L1 4725 5034 -2550 8232 196 17 6 chr5 3360932 3363395 -196266755 + L1PA13 LINE L1 5120 7601 0 288 250 28 0 chr5 3364399 3364471 -196265679 + MIR SINE MIR 79 152 -56 1623 224 83 25 chr5 3365591 3366037 -196264113 - MER63C DNA MER1_type -213 717 246 1465 214 31 13 chr5 3367333 3367716 -196262434 + MLT1B LTR MaLR 1 390 0 394 291 14 20 chr5 3370590 3370738 -196259412 + (CATA)n Simple_repeat Simple_repeat 4 150 0 373 333 6 22 chr5 3370688 3370871 -196259279 + (CA)n Simple_repeat Simple_repeat 1 180 0 * 424 322 0 23 chr5 3370883 3371054 -196259096 + (CA)n Simple_repeat Simple_repeat 2 168 0 2352 89 47 39 chr5 3371103 3371464 -196258686 + THE1B LTR MaLR 1 364 0 916 213 77 5 chr5 3371848 3372069 -196258081 + MLT1A1 LTR MaLR 129 365 0 23 0 0 0 chr5 3372774 3372797 -196257353 + AT_rich Low_complexity Low_complexity 1 23 0 561 261 22 0 chr5 3372980 3373118 -196257032 + MER58A DNA MER1_type 37 177 -47 326 221 132 42 chr5 3373791 3373981 -196256169 + LTR33A LTR ERVL 268 474 -49 195 42 0 0 chr5 3375243 3375267 -196254883 + (A)n Simple_repeat Simple_repeat 1 24 0 1408 193 27 24 chr5 3376553 3376849 -196253301 + AluJo SINE Alu 1 297 -15 364 328 8 0 chr5 3376857 3376991 -196253159 - HAL1 LINE L1 -125 2382 2248 231 36 0 0 chr5 3377016 3377044 -196253106 + (CA)n Simple_repeat Simple_repeat 1 28 0 394 297 108 43 chr5 3377251 3377483 -196252667 - HAL1 LINE L1 -650 1857 1611 531 250 0 0 chr5 3378462 3378626 -196251524 + (CA)n Simple_repeat Simple_repeat 2 165 0 210 246 0 35 chr5 3378627 3378684 -196251466 + (CACG)n Simple_repeat Simple_repeat 1 55 0 2038 138 165 8 chr5 3379789 3380159 -196249991 + MSTA LTR MaLR 1 428 0 1030 147 32 6 chr5 3380187 3380343 -196249807 + FRAM SINE Alu 1 157 -19 2188 123 0 3 chr5 3380502 3380802 -196249348 - AluSc SINE Alu -9 300 2 255 309 71 83 chr5 3381135 3381303 -196248847 + L3b LINE CR1 1344 1509 -74 2324 118 52 6 chr5 3382229 3382577 -196247573 - THE1B LTR MaLR 0 364 1 202 363 118 0 chr5 3383953 3384055 -196246095 - L2 LINE L2 0 3313 3200 1891 55 4 12 chr5 3384476 3384731 -196245419 - L1P3 LINE L1 -533 5621 5369 1462 98 0 0 chr5 3384731 3384924 -196245226 + L1PA7 LINE L1 5960 6153 -1 3929 216 118 69 chr5 3385249 3387617 -196242533 + L1MD1 LINE L1 19 2271 -4269 1550 186 29 7 chr5 3387617 3387897 -196242253 + AluJb SINE Alu 3 288 -24 225 65 0 0 chr5 3387901 3387932 -196242218 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3929 216 118 69 chr5 3387932 3388024 -196242126 + L1MD1 LINE L1 2273 2680 -3860 3212 214 64 61 chr5 3388032 3389075 -196241075 + L1MD1 LINE L1 4974 6013 -623 2434 65 0 7 chr5 3389075 3389392 -196240758 - AluY SINE Alu 0 311 2 3212 214 64 61 chr5 3389392 3389419 -196240731 + L1MD1 LINE L1 6013 6038 -598 2210 184 37 16 chr5 3389419 3389678 -196240472 - MER65A LTR ERV1 0 445 172 315 0 0 0 chr5 3389678 3389713 -196240437 + (TG)n Simple_repeat Simple_repeat 1 35 0 2210 184 37 16 chr5 3389713 3389889 -196240261 - MER65A LTR ERV1 -273 172 1 3212 214 64 61 chr5 3389889 3390381 -196239769 + L1MD1 LINE L1 6038 6528 -108 2767 29 7 0 chr5 3390381 3390690 -196239460 + AluY SINE Alu 1 311 0 3212 214 64 61 chr5 3390690 3390751 -196239399 + L1MD1 LINE L1 6528 6587 -49 210 37 0 0 chr5 3391945 3391972 -196238178 + (CA)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr5 3391971 3391991 -196238159 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 308 158 13 0 chr5 3392090 3392166 -196237984 + (CA)n Simple_repeat Simple_repeat 2 78 0 213 204 23 23 chr5 3392185 3392273 -196237877 + (CA)n Simple_repeat Simple_repeat 2 89 0 632 229 19 61 chr5 3392871 3393085 -196237065 - MER101 LTR ERV1 -19 455 251 386 248 152 21 chr5 3393257 3393402 -196236748 - MER101 LTR ERV1 -302 172 9 460 213 31 55 chr5 3393660 3393787 -196236363 - MER5A DNA MER1_type -2 187 64 2374 100 3 0 chr5 3394015 3394316 -196235834 - AluSx SINE Alu -10 302 1 2472 63 0 13 chr5 3394746 3395047 -196235103 + AluY SINE Alu 1 297 -14 745 251 26 11 chr5 3396144 3396335 -196233815 + MLT1B LTR MaLR 195 388 -2 294 29 0 0 chr5 3397207 3397242 -196232908 + (TG)n Simple_repeat Simple_repeat 1 35 0 2197 112 6 34 chr5 3397737 3398058 -196232092 - AluSx SINE Alu 0 312 1 327 226 13 7 chr5 3401713 3401868 -196228282 + GA-rich Low_complexity Low_complexity 1 156 0 218 343 55 0 chr5 3403123 3403196 -196226954 + MIR SINE MIR 116 192 -70 306 204 68 116 chr5 3404901 3405048 -196225102 - MLT1B LTR MaLR -246 144 5 323 285 85 48 chr5 3406364 3406529 -196223621 + L1MC/D LINE L1 5537 5707 -2101 494 244 125 0 chr5 3407252 3407412 -196222738 + MER31B LTR ERV1 2 181 -285 1078 233 94 36 chr5 3407822 3408260 -196221890 + MER101 LTR ERV1 12 474 0 5271 149 16 6 chr5 3409888 3411119 -196219031 - L1PA15 LINE L1 -21 6144 4902 1233 193 7 15 chr5 3411110 3411380 -196218770 + L1PA15 LINE L1 4619 4886 -1260 * 463 209 19 19 chr5 3412639 3412797 -196217353 + A-rich Low_complexity Low_complexity 5 162 0 225 233 0 50 chr5 3412798 3412830 -196217320 + GA-rich Low_complexity Low_complexity 4 33 -27 2311 91 7 0 chr5 3412830 3413128 -196217022 + AluSq SINE Alu 13 312 -1 225 233 0 50 chr5 3413128 3413155 -196216995 + GA-rich Low_complexity Low_complexity 33 60 0 211 260 100 0 chr5 3413421 3413471 -196216679 - MER5A DNA MER1_type -5 184 130 1606 180 4 0 chr5 3413661 3413973 -196216177 - AluJb SINE Alu 0 312 33 2044 171 84 3 chr5 3414219 3414610 -196215540 + MSTB LTR MaLR 4 426 0 2360 233 33 32 chr5 3416353 3417045 -196213105 + L1MD2 LINE L1 5473 6165 -194 237 320 21 10 chr5 3417049 3417146 -196213004 + (CA)n Simple_repeat Simple_repeat 1 98 0 441 311 0 39 chr5 3417163 3417343 -196212807 + (CA)n Simple_repeat Simple_repeat 1 173 0 377 197 26 0 chr5 3417348 3417424 -196212726 + L1MD2 LINE L1 6139 6216 -143 310 278 61 0 chr5 3417532 3417647 -196212503 + L1MD2 LINE L1 6230 6351 -8 1792 132 3 31 chr5 3417653 3417942 -196212208 - AluSg1 SINE Alu -18 291 11 803 196 0 6 chr5 3421913 3422092 -196208058 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 219 300 17 0 chr5 3422092 3422152 -196207998 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 330 106 0 0 chr5 3424451 3424498 -196205652 + Alu SINE Alu 1 47 -256 354 128 0 0 chr5 3424510 3424573 -196205577 + Alu SINE Alu 1 47 -255 2209 92 7 0 chr5 3424599 3424882 -196205268 + AluSx SINE Alu 1 285 -27 222 274 186 18 chr5 3425792 3425905 -196204245 + MIR SINE MIR 13 144 -118 2191 130 0 0 chr5 3426531 3426832 -196203318 + AluSg SINE Alu 1 301 -9 2312 108 22 24 chr5 3427775 3428144 -196202006 + L1PA11 LINE L1 5746 6113 -61 215 91 0 23 chr5 3428248 3428292 -196201858 + (TC)n Simple_repeat Simple_repeat 1 43 0 333 68 0 0 chr5 3428303 3428347 -196201803 + (GGA)n Simple_repeat Simple_repeat 3 46 0 317 237 13 0 chr5 3429780 3429856 -196200294 + MER103 DNA DNA 8 84 -82 462 274 7 28 chr5 3430496 3430704 -196199446 + C-rich Low_complexity Low_complexity 1 203 0 608 231 82 33 chr5 3432109 3432423 -196197727 + MLT1A1 LTR MaLR 4 354 -36 25 0 0 0 chr5 3433033 3433058 -196197092 + AT_rich Low_complexity Low_complexity 1 25 0 2257 115 128 13 chr5 3433443 3433827 -196196323 - MSTA LTR MaLR 0 428 1 29 28 0 0 chr5 3433959 3433995 -196196155 + AT_rich Low_complexity Low_complexity 1 36 0 1988 211 42 68 chr5 3434113 3434757 -196195393 - MER63C DNA MER1_type -303 627 1 329 335 62 40 chr5 3434760 3434936 -196195214 + L1M4 LINE L1 3742 3921 -2225 277 261 23 0 chr5 3435383 3435471 -196194679 + L1M4 LINE L1 4137 4226 -1920 2316 109 0 6 chr5 3435862 3436175 -196193975 - AluSq SINE Alu -2 311 1 228 143 0 0 chr5 3436198 3436240 -196193910 + (T)n Simple_repeat Simple_repeat 1 42 0 21 36 0 0 chr5 3436653 3436681 -196193469 + AT_rich Low_complexity Low_complexity 1 28 0 299 276 57 57 chr5 3437113 3437225 -196192925 - L1ME4a LINE L1 -158 5963 5852 4839 95 6 13 chr5 3437225 3437912 -196192238 - L1PA8A LINE L1 -4 6127 5446 299 276 57 57 chr5 3437912 3438082 -196192068 - L1ME4a LINE L1 -268 5853 5681 23 0 0 0 chr5 3438829 3438852 -196191298 + AT_rich Low_complexity Low_complexity 1 23 0 200 309 0 0 chr5 3439228 3439325 -196190825 + (GGATG)n Simple_repeat Simple_repeat 1 97 0 399 41 0 0 chr5 3439828 3439877 -196190273 + (GA)n Simple_repeat Simple_repeat 2 50 0 231 245 0 0 chr5 3442907 3443001 -196187149 + (CA)n Simple_repeat Simple_repeat 2 95 0 558 246 2 0 chr5 3445863 3446446 -196183704 + (CA)n Simple_repeat Simple_repeat 1 584 0 247 237 0 0 chr5 3446573 3446632 -196183518 + (TG)n Simple_repeat Simple_repeat 2 60 0 310 274 11 11 chr5 3446633 3446728 -196183422 + (CA)n Simple_repeat Simple_repeat 2 96 0 225 322 35 0 chr5 3446747 3446834 -196183316 + MIR3 SINE MIR 82 171 -37 357 187 0 0 chr5 3446961 3447036 -196183114 + (CA)n Simple_repeat Simple_repeat 1 75 0 201 241 0 0 chr5 3447109 3447163 -196182987 + (CA)n Simple_repeat Simple_repeat 1 54 0 231 356 11 0 chr5 3447315 3447405 -196182745 + (CACG)n Simple_repeat Simple_repeat 1 91 0 210 286 0 18 chr5 3447716 3447772 -196182378 + GA-rich Low_complexity Low_complexity 2 56 0 32 75 0 0 chr5 3447940 3448007 -196182143 + AT_rich Low_complexity Low_complexity 1 67 0 303 28 0 0 chr5 3448474 3448510 -196181640 + (CA)n Simple_repeat Simple_repeat 1 36 0 263 272 54 17 chr5 3450580 3450838 -196179312 + MLT1A1 LTR MaLR 48 363 -11 203 333 29 0 chr5 3453593 3453662 -196176488 - L2 LINE L2 -16 3297 3227 1534 253 98 48 chr5 3454015 3454599 -196175551 + L1MCb LINE L1 717 1270 -5475 405 0 0 0 chr5 3454599 3454644 -196175506 + (CA)n Simple_repeat Simple_repeat 2 46 0 1534 253 98 48 chr5 3454644 3455711 -196174439 + L1MCb LINE L1 1270 2732 -4013 323 135 0 0 chr5 3455737 3455789 -196174361 - MLT2B1 LTR ERVL 0 520 469 305 258 32 21 chr5 3455814 3455907 -196174243 + L1MC4 LINE L1 6615 6708 -1334 * 315 178 19 122 chr5 3455867 3455974 -196174176 - L1MC4 LINE L1 -1333 6709 6614 12075 85 14 12 chr5 3456139 3457818 -196172332 - HERVL LTR ERVL -429 5225 3545 456 326 63 40 chr5 3457842 3458385 -196171765 + L1MEc LINE L1 1714 2268 -4128 1073 149 5 0 chr5 3458505 3458706 -196171444 - L1P LINE L1 -3603 2543 2342 7545 194 9 32 chr5 3458707 3461042 -196169108 + L1PA14 LINE L1 3813 6159 -2 1289 130 5 9 chr5 3461042 3461257 -196168893 + L1MA4A LINE L1 5772 5985 -318 1411 126 10 0 chr5 3461309 3461507 -196168643 - AluSc SINE Alu -5 304 105 1679 199 30 60 chr5 3462946 3463348 -196166802 - MLT1B LTR MaLR 0 390 1 280 230 10 10 chr5 3463597 3463697 -196166453 + GA-rich Low_complexity Low_complexity 3 102 0 265 306 41 54 chr5 3463699 3463846 -196166304 - MIR SINE MIR -16 246 102 275 200 0 0 chr5 3464268 3464318 -196165832 - Alu SINE Alu -253 50 1 823 205 18 0 chr5 3464318 3464489 -196165661 + L1MA4A LINE L1 6059 6232 -71 238 92 46 62 chr5 3465926 3465991 -196164159 + L1PA16 LINE L1 6100 6163 -3 1714 249 133 26 chr5 3466495 3467230 -196162920 + L1ME2 LINE L1 46 757 -5288 2326 96 3 0 chr5 3467269 3467571 -196162579 + AluSg SINE Alu 4 306 -4 222 297 47 0 chr5 3468492 3468556 -196161594 + MER5A DNA MER1_type 35 101 -88 23 0 0 0 chr5 3468609 3468632 -196161518 + AT_rich Low_complexity Low_complexity 1 23 0 187 320 126 0 chr5 3471567 3471670 -196158480 - L3 LINE CR1 -551 1026 911 355 303 123 20 chr5 3473802 3473997 -196156153 + L3 LINE CR1 773 987 -590 2116 129 3 7 chr5 3474584 3474886 -196155264 - AluSx SINE Alu -11 301 1 200 79 105 0 chr5 3478835 3478873 -196151277 - MER5B DNA MER1_type -134 44 3 25 0 0 0 chr5 3481029 3481054 -196149096 + AT_rich Low_complexity Low_complexity 1 25 0 237 333 29 10 chr5 3481494 3481596 -196148554 - MIR SINE MIR -79 183 80 459 229 0 8 chr5 3481791 3481913 -196148237 + L1ME2 LINE L1 3131 3251 -3313 785 273 188 14 chr5 3481926 3482358 -196147792 + L1ME2 LINE L1 4895 5401 -1163 959 262 62 18 chr5 3482395 3482958 -196147192 + L1ME2 LINE L1 5460 6043 -541 911 247 83 43 chr5 3483378 3483864 -196146286 + L1ME2 LINE L1 6032 6535 -47 198 327 101 24 chr5 3484674 3484842 -196145308 - MIR SINE MIR -73 189 9 1047 236 57 20 chr5 3485439 3485736 -196144414 - MER54B LTR ERVL 0 793 486 214 91 0 45 chr5 3486874 3486918 -196143232 + (CCCTAA)n Simple_repeat Simple_repeat 1 42 0 826 180 8 0 chr5 3487732 3488089 -196142061 + (TCCA)n Simple_repeat Simple_repeat 1 360 0 795 177 12 0 chr5 3488106 3488361 -196141789 + (TCCA)n Simple_repeat Simple_repeat 1 258 0 489 219 0 0 chr5 3488373 3488487 -196141663 + (TCCA)n Simple_repeat Simple_repeat 2 115 0 316 307 34 0 chr5 3488487 3488575 -196141575 - L2 LINE L2 0 3313 3223 23 0 0 0 chr5 3488928 3488951 -196141199 + AT_rich Low_complexity Low_complexity 1 23 0 2164 82 43 0 chr5 3490575 3490856 -196139294 + AluY SINE Alu 1 293 -18 210 203 17 17 chr5 3491754 3491813 -196138337 + GA-rich Low_complexity Low_complexity 3 61 0 227 240 91 109 chr5 3492298 3492473 -196137677 - MIR SINE MIR -25 183 1 374 91 0 0 chr5 3494261 3494316 -196135834 - MLT2A2 LTR ERVL 0 453 399 224 169 70 28 chr5 3494320 3494462 -196135688 + (TA)n Simple_repeat Simple_repeat 1 148 0 235 167 19 0 chr5 3494406 3494460 -196135690 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 2147 126 10 0 chr5 3495437 3495739 -196134411 - AluSx SINE Alu -7 305 1 427 315 34 7 chr5 3498721 3498867 -196131283 - MIR SINE MIR -46 216 67 505 259 79 41 chr5 3499037 3499462 -196130688 - MLT1D LTR MaLR -17 450 1 269 252 145 23 chr5 3500415 3500546 -196129604 + MLT1L LTR MaLR 237 419 -128 479 222 19 0 chr5 3502541 3502649 -196127501 + HY1 scRNA scRNA 1 110 -2 683 74 0 54 chr5 3502842 3502991 -196127159 + (TTAGGG)n Simple_repeat Simple_repeat 1 141 0 632 323 76 56 chr5 3503228 3503652 -196126498 + HAL1b LINE L1 4 354 -994 348 127 0 0 chr5 3503652 3503707 -196126443 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 404 281 90 36 chr5 3503708 3503875 -196126275 + HAL1b LINE L1 339 514 -834 732 290 72 28 chr5 3504816 3505358 -196124792 - L1MEc LINE L1 -3207 2922 2357 2293 109 0 13 chr5 3505402 3505715 -196124435 - AluSg SINE Alu -1 309 1 665 321 79 44 chr5 3505772 3506533 -196123617 - L1MEc LINE L1 -3890 2239 1436 285 256 25 113 chr5 3506636 3506839 -196123311 - L1MEc LINE L1 -4862 1257 1073 335 224 82 112 chr5 3506840 3507036 -196123114 - L1MEc LINE L1 -5100 1019 830 621 200 0 0 chr5 3507042 3507177 -196122973 + FRAM SINE Alu 38 172 0 314 288 73 110 chr5 3507177 3507396 -196122754 - L1MEc LINE L1 -5306 813 603 23 0 0 0 chr5 3507652 3507675 -196122475 + AT_rich Low_complexity Low_complexity 1 23 0 1160 166 5 0 chr5 3507675 3507880 -196122270 - L1PB1 LINE L1 -1 6150 5945 3042 167 22 8 chr5 3507945 3509018 -196121132 + L1M1 LINE L1 4688 5780 -523 * 5877 206 8 5 chr5 3509016 3510335 -196119815 - L1P LINE L1 -2314 3832 2509 2937 92 5 2 chr5 3510435 3510860 -196119290 - L1PA7 LINE L1 -72 6082 5657 1324 42 0 12 chr5 3513815 3513981 -196116169 - L1PA5 LINE L1 -1 6153 5990 2173 30 0 0 chr5 3513981 3514245 -196115905 + L1PA5 LINE L1 5710 5973 -182 184 306 40 40 chr5 3516325 3516449 -196113701 - L2 LINE L2 -11 3261 3138 333 0 0 0 chr5 3518506 3518543 -196111607 + (T)n Simple_repeat Simple_repeat 1 37 0 8514 212 56 74 chr5 3723792 3724083 -195906067 - L1MA6 LINE L1 -237 7482 7187 892 233 165 45 chr5 3724083 3724349 -195905801 - AluJb SINE Alu -4 298 1 8514 212 56 74 chr5 3724349 3725774 -195904376 - L1MA6 LINE L1 -532 7187 5737 1793 162 7 10 chr5 3725774 3726070 -195904080 - AluSx SINE Alu -17 295 1 8514 212 56 74 chr5 3726070 3727772 -195902378 - L1MA6 LINE L1 -1982 5737 4005 1451 131 40 33 chr5 3727772 3728046 -195902104 - AluSq SINE Alu -7 306 31 8514 212 56 74 chr5 3728046 3728147 -195902003 - L1MA6 LINE L1 -3714 4005 3904 244 250 0 0 chr5 3728147 3728207 -195901943 - AluS SINE Alu -241 60 1 8514 212 56 74 chr5 3728207 3730340 -195899810 - L1MA6 LINE L1 -3815 3904 1884 258 393 28 7 chr5 3730441 3730701 -195899449 - L1M3a LINE L1 -5227 728 357 276 341 52 12 chr5 3730823 3731112 -195899038 - L1M3a LINE L1 -5196 759 541 1030 311 39 30 chr5 3731167 3731743 -195898407 - L1M3a LINE L1 -5195 760 2 254 314 161 0 chr5 3732007 3732125 -195898025 + L1MEc LINE L1 37 173 -6223 1352 296 44 2 chr5 3732521 3732977 -195897173 + LTR16C LTR ERVL 2 476 -15 819 245 61 32 chr5 3734013 3734291 -195895859 - MLT1F1 LTR MaLR 0 567 282 181 320 31 21 chr5 3734611 3734708 -195895442 + MIR3 SINE MIR 101 198 -10 732 215 55 100 chr5 3736197 3736578 -195893572 - L1MD1 LINE L1 -12 6230 5867 625 157 9 0 chr5 3736864 3736972 -195893178 - MLT1B LTR MaLR -3 387 279 1033 248 158 25 chr5 3737717 3738153 -195891997 + MLT1D LTR MaLR 12 505 0 238 343 35 14 chr5 3739001 3739144 -195891006 - MIR SINE MIR -81 181 36 477 0 0 0 chr5 3739259 3739312 -195890838 + (CA)n Simple_repeat Simple_repeat 2 54 0 261 0 0 0 chr5 3739354 3739383 -195890767 + (CA)n Simple_repeat Simple_repeat 2 30 0 333 0 0 0 chr5 3739425 3739462 -195890688 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr5 3739462 3739487 -195890663 + (A)n Simple_repeat Simple_repeat 1 25 0 2469 52 0 29 chr5 3740868 3741174 -195888976 - AluY SINE Alu -14 297 1 1353 149 117 25 chr5 3741176 3741457 -195888693 - AluY SINE Alu -4 307 1 999 78 8 0 chr5 3741476 3741605 -195888545 - AluY SINE Alu -181 130 1 964 88 0 0 chr5 3742585 3742721 -195887429 + L1PA14 LINE L1 6023 6158 -3 302 257 57 9 chr5 3744730 3744835 -195885315 - MIR SINE MIR -12 250 141 21 0 0 0 chr5 3746381 3746402 -195883748 + AT_rich Low_complexity Low_complexity 1 21 0 2158 119 3 0 chr5 3747614 3747909 -195882241 - AluSx SINE Alu -16 296 1 231 217 0 0 chr5 3749153 3749213 -195880937 + (CA)n Simple_repeat Simple_repeat 2 61 0 213 310 0 49 chr5 3749699 3749883 -195880267 + G-rich Low_complexity Low_complexity 2 176 0 239 231 52 35 chr5 3749962 3750135 -195880015 + (GGGTG)n Simple_repeat Simple_repeat 5 180 0 394 144 0 76 chr5 3750428 3750546 -195879604 + AluSq/x SINE Alu 8 116 -187 25 65 0 0 chr5 3753979 3754025 -195876125 + AT_rich Low_complexity Low_complexity 1 46 0 315 0 0 0 chr5 3754591 3754626 -195875524 + (CA)n Simple_repeat Simple_repeat 2 36 0 262 214 230 16 chr5 3755197 3755323 -195874827 - MIR SINE MIR -43 219 67 2415 81 0 0 chr5 3755728 3756025 -195874125 - AluY SINE Alu -14 297 1 267 286 36 27 chr5 3756844 3756956 -195873194 + MIR SINE MIR 17 129 -133 2222 120 10 0 chr5 3756982 3757290 -195872860 - AluSp SINE Alu -2 311 1 218 245 0 0 chr5 3758235 3758284 -195871866 - MIR SINE MIR -13 249 201 358 298 8 8 chr5 3758639 3758763 -195871387 - MER5B DNA MER1_type -49 129 6 5648 182 56 10 chr5 3759979 3760498 -195869652 + Tigger3b DNA MER2_type 13 507 -2521 180 0 0 0 chr5 3760498 3760518 -195869632 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 5648 182 56 10 chr5 3760518 3760539 -195869611 + Tigger3b DNA MER2_type 507 526 -2502 2350 119 0 0 chr5 3760539 3760851 -195869299 + AluSx SINE Alu 1 312 0 5648 182 56 10 chr5 3760851 3761475 -195868675 + Tigger3b DNA MER2_type 526 1231 0 1619 46 0 0 chr5 3761810 3762007 -195868143 - L1PA5 LINE L1 0 6154 5958 291 252 84 35 chr5 3762034 3762177 -195867973 - L1ME LINE L1 -450 5671 5522 27 0 0 0 chr5 3762374 3762401 -195867749 + AT_rich Low_complexity Low_complexity 1 27 0 199 239 0 0 chr5 3763085 3763131 -195867019 - MIR SINE MIR -111 151 106 7435 156 26 2 chr5 3763328 3765316 -195864834 - L1PA14 LINE L1 -214 5947 3919 200 83 0 28 chr5 3765316 3765352 -195864798 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7067 26 0 1 chr5 3765352 3766159 -195863991 - L1PA3 LINE L1 -24 6131 5326 6487 34 0 0 chr5 3766156 3766930 -195863220 + L1PA3 LINE L1 4559 5332 -814 * 3957 167 17 21 chr5 3766924 3767117 -195863033 - L1PA14 LINE L1 -2221 3925 3733 * 2295 100 7 0 chr5 3767117 3767416 -195862734 - AluSg SINE Alu -9 301 1 3957 167 17 21 chr5 3767416 3767970 -195862180 - L1PA14 LINE L1 -2413 3733 3181 314 264 241 62 chr5 3768083 3768778 -195861372 - L1M2 LINE L1 -4300 2096 1297 234 0 0 0 chr5 3768942 3768968 -195861182 + (CA)n Simple_repeat Simple_repeat 2 27 0 308 286 52 28 chr5 3769061 3769309 -195860841 - L1ME LINE L1 -5262 808 555 2133 168 32 8 chr5 3769862 3770242 -195859908 - MLT1B LTR MaLR -1 389 1 938 314 99 8 chr5 3770242 3770891 -195859259 + L2 LINE L2 1916 2716 -598 394 282 41 9 chr5 3770925 3771145 -195859005 + L1ME3 LINE L1 4382 4608 -1538 789 62 0 23 chr5 3771153 3771281 -195858869 + (TG)n Simple_repeat Simple_repeat 2 126 0 225 0 0 0 chr5 3771448 3771473 -195858677 + (CA)n Simple_repeat Simple_repeat 2 26 0 978 258 98 43 chr5 3771479 3772222 -195857928 + L1ME3 LINE L1 5121 5921 -241 184 346 80 16 chr5 3772262 3772450 -195857700 + L2 LINE L2 2826 3025 -288 398 313 33 0 chr5 3772467 3772617 -195857533 + L2 LINE L2 3141 3295 -18 241 321 68 21 chr5 3774104 3774294 -195855856 + L2 LINE L2 2881 3079 -234 256 276 67 29 chr5 3774418 3774523 -195855627 + L2 LINE L2 3201 3309 -4 1318 213 135 19 chr5 3776102 3776516 -195853634 + MLT1C LTR MaLR 5 466 -1 255 119 45 15 chr5 3779685 3779752 -195850398 + GA-rich Low_complexity Low_complexity 1 69 0 4106 211 40 34 chr5 3781012 3781048 -195849102 + L1M3 LINE L1 4213 4247 -1936 189 74 0 0 chr5 3781048 3781075 -195849075 + (CA)n Simple_repeat Simple_repeat 1 27 0 4106 211 40 34 chr5 3781075 3782432 -195847718 + L1M3 LINE L1 4247 5613 -570 939 177 0 0 chr5 3782454 3782601 -195847549 + FRAM SINE Alu 6 152 -24 468 91 0 0 chr5 3782610 3782676 -195847474 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 249 33 0 0 chr5 3783522 3783552 -195846598 + (TG)n Simple_repeat Simple_repeat 1 30 0 1726 168 3 18 chr5 3783698 3783984 -195846166 - AluJo SINE Alu -30 282 1 2094 119 0 17 chr5 3791397 3791699 -195838451 - AluSx SINE Alu -15 297 1 1564 218 78 43 chr5 3791840 3792158 -195837992 - MLT1D LTR MaLR 0 505 163 2179 125 0 0 chr5 3792158 3792447 -195837703 - AluSx SINE Alu -23 289 1 1564 218 78 43 chr5 3792447 3792615 -195837535 - MLT1D LTR MaLR -342 163 2 262 371 34 0 chr5 3792993 3793082 -195837068 + L2 LINE L2 3165 3256 -16 430 254 14 14 chr5 3793272 3793410 -195836740 + L2 LINE L2 3175 3312 -1 4206 106 23 2 chr5 3793556 3794159 -195835991 - L1PB2 LINE L1 -114 6037 5422 1043 216 5 10 chr5 3794164 3794368 -195835782 - AluJo SINE Alu -26 286 84 2295 108 0 0 chr5 3794754 3795049 -195835101 + AluSg SINE Alu 1 295 -15 43966 34 18 2 chr5 3797058 3803108 -195827042 + L1PA3 LINE L1 1 6155 0 22 0 0 0 chr5 3803182 3803204 -195826946 + AT_rich Low_complexity Low_complexity 1 22 0 1037 291 40 2 chr5 3803219 3803669 -195826481 + L1M4 LINE L1 4138 4604 -1542 665 175 7 0 chr5 3803679 3803816 -195826334 + (ATG)n Simple_repeat Simple_repeat 1 138 0 255 170 0 0 chr5 3803926 3803973 -195826177 + (ATG)n Simple_repeat Simple_repeat 1 47 0 862 271 116 32 chr5 3804010 3804289 -195825861 + L1M4 LINE L1 4647 4901 -1245 207 0 0 0 chr5 3804289 3804312 -195825838 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 862 271 116 32 chr5 3804312 3804619 -195825531 + L1M4 LINE L1 4901 5282 -864 645 243 34 28 chr5 3805273 3805450 -195824700 - MER20 DNA MER1_type -31 188 11 254 169 34 17 chr5 3806359 3806418 -195823732 + MLT1K LTR MaLR 184 243 -345 341 21 0 21 chr5 3806736 3806783 -195823367 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1298 214 21 32 chr5 3806787 3807072 -195823078 - AluJo SINE Alu -30 282 1 461 198 8 0 chr5 3807120 3807246 -195822904 + (TG)n Simple_repeat Simple_repeat 2 128 0 239 274 0 16 chr5 3807274 3807336 -195822814 - MIR3 SINE MIR -29 179 119 2226 125 0 22 chr5 3807667 3807986 -195822164 + AluSx SINE Alu 1 312 0 392 312 36 84 chr5 3808420 3808776 -195821374 + L3 LINE CR1 1207 1545 -32 291 209 186 0 chr5 3808936 3809022 -195821128 + LTR16A LTR ERVL 242 343 -107 186 349 16 0 chr5 3809860 3809923 -195820227 - MIR3 SINE MIR -3 205 142 216 0 0 0 chr5 3810965 3810989 -195819161 + (T)n Simple_repeat Simple_repeat 1 24 0 565 198 132 56 chr5 3816190 3816387 -195813763 + MER20 DNA MER1_type 7 218 -1 200 32 32 0 chr5 3816937 3816946 -195813204 + (CAA)n Simple_repeat Simple_repeat 2 9 -24 2058 133 0 25 chr5 3816946 3817262 -195812888 + AluSx SINE Alu 1 308 -4 200 32 32 0 chr5 3817262 3817283 -195812867 + (CAA)n Simple_repeat Simple_repeat 9 33 0 225 0 0 0 chr5 3821372 3821397 -195808753 + (T)n Simple_repeat Simple_repeat 1 25 0 596 253 122 90 chr5 3822858 3824506 -195805644 + L1ME1 LINE L1 497 2210 -4186 2120 139 3 3 chr5 3824506 3824816 -195805334 - AluSx SINE Alu -2 310 1 596 253 122 90 chr5 3824816 3824976 -195805174 + L1ME1 LINE L1 2210 2363 -4033 279 169 67 0 chr5 3824982 3825071 -195805079 + (TA)n Simple_repeat Simple_repeat 1 95 0 3586 261 99 43 chr5 3825098 3826420 -195803730 + L1ME1 LINE L1 2861 4108 -2127 222 37 0 0 chr5 3826420 3826447 -195803703 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1838 143 34 0 chr5 3826455 3826721 -195803429 - AluSx SINE Alu -32 280 6 3586 261 99 43 chr5 3826721 3826941 -195803209 + L1ME1 LINE L1 4114 4320 -1915 1235 259 61 5 chr5 3826941 3827316 -195802834 - MSTD LTR MaLR 0 396 1 3586 261 99 43 chr5 3827316 3828856 -195801294 + L1ME1 LINE L1 4320 6131 -104 2541 271 65 31 chr5 3829240 3831172 -195798978 + L1MEc LINE L1 2019 3985 -2230 364 236 32 13 chr5 3831454 3831611 -195798539 + L1MEc LINE L1 2924 3083 -3132 * 573 264 31 23 chr5 3831591 3831852 -195798298 + L1MEc LINE L1 4223 4485 -1730 1357 257 104 48 chr5 3831955 3832512 -195797638 + L1ME3 LINE L1 4228 4753 -1409 186 103 0 0 chr5 3832512 3832541 -195797609 + (CA)n Simple_repeat Simple_repeat 2 30 0 1357 257 104 48 chr5 3832541 3833609 -195796541 + L1ME3 LINE L1 4753 5938 -224 4618 22 2 4 chr5 3834012 3834557 -195795593 - L1PA4 LINE L1 -19 6136 5593 21 0 0 0 chr5 3834562 3834583 -195795567 + AT_rich Low_complexity Low_complexity 1 21 0 216 67 0 0 chr5 3834938 3834968 -195795182 + (CA)n Simple_repeat Simple_repeat 2 31 0 2201 69 0 3 chr5 3835751 3836042 -195794108 - L1PA7 LINE L1 0 6154 5865 2789 93 37 0 chr5 3836042 3836471 -195793679 + L1P LINE L1 3443 3887 -2259 25 0 0 0 chr5 3836506 3836531 -195793619 + AT_rich Low_complexity Low_complexity 1 25 0 2361 86 0 10 chr5 3836976 3837277 -195792873 - AluSc SINE Alu -11 298 1 5147 19 0 0 chr5 3837629 3838241 -195791909 + L1PA3 LINE L1 5568 6179 0 212 328 23 23 chr5 3838272 3838400 -195791750 + MIR3 SINE MIR 71 198 -10 1904 93 9 102 chr5 3838988 3839310 -195790840 + AluSc SINE Alu 1 292 -17 909 203 190 7 chr5 3839342 3839632 -195790518 - MLT1B LTR MaLR -41 349 7 276 172 0 0 chr5 3839762 3839820 -195790330 + (CA)n Simple_repeat Simple_repeat 1 58 0 2502 77 0 0 chr5 3839990 3840301 -195789849 - AluY SINE Alu 0 311 1 230 300 0 29 chr5 3840901 3840971 -195789179 - L2 LINE L2 0 3313 3246 486 210 5 38 chr5 3841133 3841319 -195788831 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 369 224 21 32 chr5 3841320 3841607 -195788543 + (CA)n Simple_repeat Simple_repeat 1 283 0 333 304 8 16 chr5 3841618 3841743 -195788407 + (CA)n Simple_repeat Simple_repeat 2 125 0 240 226 23 23 chr5 3841960 3842093 -195788057 + (CATA)n Simple_repeat Simple_repeat 2 134 0 1960 208 16 33 chr5 3843262 3843292 -195786858 + L1MB5 LINE L1 5585 5614 -560 2386 125 11 24 chr5 3843292 3843661 -195786489 - THE1B LTR MaLR 0 364 1 1960 208 16 33 chr5 3843661 3844201 -195785949 + L1MB5 LINE L1 5614 6145 -29 315 219 25 12 chr5 3844240 3844400 -195785750 + CT-rich Low_complexity Low_complexity 2 163 0 1263 199 69 0 chr5 3844409 3844655 -195785495 + AluJo SINE Alu 25 287 -25 258 116 0 0 chr5 3844675 3844718 -195785432 + L1MB5 LINE L1 6126 6168 -6 183 129 0 0 chr5 3844850 3844881 -195785269 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 393 215 23 11 chr5 3846032 3846209 -195783941 + CT-rich Low_complexity Low_complexity 1 179 0 667 184 0 16 chr5 3846225 3846597 -195783553 + CT-rich Low_complexity Low_complexity 1 365 0 389 36 18 0 chr5 3848270 3848325 -195781825 + (CA)n Simple_repeat Simple_repeat 2 57 0 683 251 73 71 chr5 3850014 3850425 -195779725 - L1MD2 LINE L1 -245 6048 5637 200 245 9 0 chr5 3850447 3850553 -195779597 + (TA)n Simple_repeat Simple_repeat 1 107 0 346 279 0 0 chr5 3850554 3850640 -195779510 + L1MC4 LINE L1 6616 6701 -1341 1208 218 97 15 chr5 3850641 3851168 -195778982 - L1MD2 LINE L1 -668 5625 5071 1746 263 96 43 chr5 3851271 3852554 -195777596 - L1MD2 LINE L1 -2880 3200 1771 288 77 0 0 chr5 3852554 3852593 -195777557 + (TG)n Simple_repeat Simple_repeat 2 40 0 1746 263 96 43 chr5 3852593 3853399 -195776751 - L1MD2 LINE L1 -4309 1771 1009 794 254 57 19 chr5 3853400 3853751 -195776399 - L1MD2 LINE L1 -5180 903 540 250 322 7 33 chr5 3853817 3853969 -195776181 + L1ME1 LINE L1 278 425 -6138 462 278 82 26 chr5 3854197 3854511 -195775639 + L1ME1 LINE L1 1368 1849 -4714 234 150 0 0 chr5 3854487 3854527 -195775623 + L1ME1 LINE L1 2940 2979 -3403 * 1969 122 45 0 chr5 3854562 3854850 -195775300 + AluSq SINE Alu 1 301 -12 312 247 0 0 chr5 3854897 3854982 -195775168 + L1ME1 LINE L1 4800 4884 -1498 8208 124 22 12 chr5 3854994 3855160 -195774990 + L1PA10 LINE L1 4033 4196 -1972 1576 112 8 48 chr5 3855160 3855409 -195774741 + AluSc SINE Alu 63 301 -8 8208 124 22 12 chr5 3855409 3856575 -195773575 + L1PA10 LINE L1 4196 5382 -786 2846 13 0 0 chr5 3856575 3856888 -195773262 + AluYb8 SINE Alu 2 314 -4 8208 124 22 12 chr5 3856888 3857672 -195772478 + L1PA10 LINE L1 5382 6157 -11 21 0 0 0 chr5 3857680 3857701 -195772449 + AT_rich Low_complexity Low_complexity 1 21 0 1207 242 34 24 chr5 3857701 3858196 -195771954 + L1ME1 LINE L1 4879 5378 -1004 * 1821 198 21 7 chr5 3858194 3858619 -195771531 + L1MC3 LINE L1 7335 7765 -20 2707 228 78 24 chr5 3858644 3859620 -195770530 + L1ME1 LINE L1 5358 6398 -4 2895 13 0 0 chr5 3859625 3859943 -195770207 - AluYb8 SINE Alu 0 318 1 219 69 0 0 chr5 3861312 3861341 -195768809 + (TA)n Simple_repeat Simple_repeat 2 30 0 312 70 0 0 chr5 3862267 3862310 -195767840 + (TG)n Simple_repeat Simple_repeat 2 44 0 1066 271 12 12 chr5 3863130 3863470 -195766680 - MER58B DNA MER1_type 0 341 2 243 0 0 0 chr5 3866190 3866217 -195763933 + (A)n Simple_repeat Simple_repeat 1 27 0 551 290 70 25 chr5 3866556 3866756 -195763394 - MIR SINE MIR -3 259 51 267 161 0 0 chr5 3869184 3869240 -195760910 + (TG)n Simple_repeat Simple_repeat 1 56 0 298 256 0 13 chr5 3870822 3870900 -195759250 + GA-rich Low_complexity Low_complexity 2 78 0 186 103 0 0 chr5 3872201 3872230 -195757920 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2394 119 31 88 chr5 3873503 3873957 -195756193 - MSTA LTR MaLR 0 428 1 282 219 0 0 chr5 3877398 3877462 -195752688 + (CA)n Simple_repeat Simple_repeat 1 64 0 1322 163 23 62 chr5 3878452 3878758 -195751392 + L1MA9 LINE L1 6013 6306 -6 1233 245 71 31 chr5 3879771 3880220 -195749930 + MLT1C LTR MaLR 1 467 0 2006 130 0 3 chr5 3881649 3881948 -195748202 - AluSc SINE Alu -11 298 1 2938 192 11 5 chr5 3882062 3882634 -195747516 + L1MA8 LINE L1 5344 5918 -373 1403 197 11 28 chr5 3882742 3883026 -195747124 - MLT2B1 LTR ERVL -240 280 2 327 49 0 0 chr5 3884456 3884497 -195745653 + (CA)n Simple_repeat Simple_repeat 2 42 0 2095 114 0 7 chr5 3885539 3885845 -195744305 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr5 3886345 3886366 -195743784 + AT_rich Low_complexity Low_complexity 1 21 0 306 227 0 13 chr5 3887711 3887786 -195742364 + MER116 DNA Mariner 1 74 -6 22 0 0 0 chr5 3889847 3889869 -195740281 + AT_rich Low_complexity Low_complexity 1 22 0 651 243 82 19 chr5 3890518 3890724 -195739426 + MER20 DNA MER1_type 1 219 0 281 273 71 71 chr5 3891077 3891260 -195738890 - MIR3 SINE MIR -25 183 1 3676 29 29 43 chr5 3891791 3892275 -195737875 + L1PA6 LINE L1 5677 6153 -1 1337 166 166 36 chr5 3894728 3895060 -195735090 + THE1C LTR MaLR 1 375 0 222 286 0 0 chr5 3896600 3896649 -195733501 + L2 LINE L2 3248 3296 -17 198 171 0 0 chr5 3898137 3898178 -195731972 + (CA)n Simple_repeat Simple_repeat 2 42 0 256 341 0 0 chr5 3898362 3898453 -195731697 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 516 303 89 62 chr5 3898723 3899106 -195731044 + L1M4 LINE L1 4157 4553 -1593 2076 129 0 0 chr5 3899106 3899409 -195730741 + AluSx SINE Alu 1 303 -9 516 303 89 62 chr5 3899409 3899441 -195730709 + L1M4 LINE L1 4553 4583 -1563 520 261 58 22 chr5 3899541 3899679 -195730471 - MIR SINE MIR -22 240 98 587 310 67 8 chr5 3902964 3903203 -195726947 - MIR SINE MIR -9 253 1 9715 179 76 56 chr5 3903576 3906069 -195724081 + L1MCa LINE L1 17 2559 -3867 1705 131 27 0 chr5 3906076 3906335 -195723815 + AluSq SINE Alu 34 299 -14 6554 172 8 26 chr5 3906342 3907496 -195722654 + L1P LINE L1 3284 4414 -1732 2071 137 0 3 chr5 3907496 3907810 -195722340 + AluSq SINE Alu 1 313 0 6554 172 8 26 chr5 3907810 3907951 -195722199 + L1P LINE L1 4414 4556 -1590 402 236 27 0 chr5 3908056 3908166 -195721984 - L1ME3 LINE L1 -318 5844 5732 1612 227 16 68 chr5 3908169 3908654 -195721496 - L1ME2 LINE L1 -306 5858 5399 731 193 47 23 chr5 3908656 3908827 -195721323 + MLT1H LTR MaLR 2 176 -373 1105 189 84 17 chr5 3908848 3909144 -195721006 - L1 LINE L1 -745 5401 5086 257 337 37 6 chr5 3909287 3909450 -195720700 - L2 LINE L2 -663 2651 2484 1821 138 97 13 chr5 3909543 3909854 -195720296 - MER1B DNA MER1_type 0 337 1 303 286 23 12 chr5 3910850 3911021 -195719129 - L1M4 LINE L1 -3136 3010 2838 * 765 179 14 0 chr5 3911020 3911160 -195718990 - L1ME2 LINE L1 -9 6155 6014 2217 108 0 0 chr5 3911396 3911701 -195718449 + AluSx SINE Alu 1 305 -7 297 281 67 76 chr5 3911706 3911930 -195718220 + MLT1J LTR MaLR 108 329 -182 2043 101 0 14 chr5 3912141 3912429 -195717721 - AluSc SINE Alu -25 284 1 1676 177 16 6 chr5 3912430 3912741 -195717409 - L1 LINE L1 -1156 4990 4677 796 213 61 17 chr5 3912840 3913070 -195717080 - L1 LINE L1 -1601 4545 4306 382 130 0 0 chr5 3913289 3913343 -195716807 + MER68 LTR ERV1 168 221 -341 1712 179 88 18 chr5 3913343 3913511 -195716639 + MSTB1 LTR MaLR 15 170 -262 186 43 0 0 chr5 3913511 3913534 -195716616 + (TTCCC)n Simple_repeat Simple_repeat 1 23 0 1712 179 88 18 chr5 3913534 3913705 -195716445 + MSTB1 LTR MaLR 170 378 -54 2160 121 0 3 chr5 3913706 3914011 -195716139 - AluSx SINE Alu -7 305 2 591 203 73 0 chr5 3914014 3914137 -195716013 + MER68 LTR ERV1 431 562 0 205 338 62 33 chr5 3914181 3914421 -195715729 + L2 LINE L2 2625 2871 -443 1795 168 3 3 chr5 3915285 3915589 -195714561 - AluJb SINE Alu -8 304 1 210 253 101 40 chr5 3915608 3915707 -195714443 - L2 LINE L2 -17 3296 3192 2343 163 46 6 chr5 3916502 3917363 -195712787 - L1M1 LINE L1 -522 5781 4885 2146 145 62 31 chr5 3917821 3918241 -195711909 + Tigger2a DNA MER2_type 2 434 0 38 68 0 0 chr5 3918844 3918917 -195711233 + GC_rich Low_complexity Low_complexity 1 73 0 256 341 0 0 chr5 3919262 3919353 -195710797 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 307 310 99 55 chr5 3919623 3920007 -195710143 + L1M4 LINE L1 4157 4557 -1589 594 112 119 0 chr5 3920008 3920151 -195709999 + AluSx SINE Alu 2 161 -151 256 149 15 30 chr5 3920417 3920484 -195709666 + GA-rich Low_complexity Low_complexity 3 68 0 232 328 0 0 chr5 3920667 3920731 -195709419 + MIR SINE MIR 45 108 -154 2933 112 18 7 chr5 3921990 3922438 -195707712 + L1PA11 LINE L1 5720 6172 -2 549 158 15 0 chr5 3922461 3922660 -195707490 + L1MA4A LINE L1 6037 6299 -4 1197 130 0 5 chr5 3923778 3923962 -195706188 + AluSg/x SINE Alu 119 301 -9 2215 90 0 10 chr5 3923965 3924265 -195705885 + AluSg1 SINE Alu 12 308 -1 192 125 0 0 chr5 3924290 3924322 -195705828 + (TA)n Simple_repeat Simple_repeat 2 33 0 212 220 0 20 chr5 3924460 3924510 -195705640 + (TA)n Simple_repeat Simple_repeat 2 50 0 1696 125 0 4 chr5 3924838 3925086 -195705064 - AluSx SINE Alu -17 295 49 1579 159 0 51 chr5 3925379 3925693 -195704457 - AluJo SINE Alu -14 298 1 219 343 71 10 chr5 3926334 3926433 -195703717 + L2 LINE L2 3162 3266 -6 2243 100 0 0 chr5 3926510 3926810 -195703340 + AluSx SINE Alu 1 300 -12 2307 89 0 0 chr5 3927372 3927676 -195702474 - AluSx SINE Alu -8 304 1 2055 178 40 40 chr5 3928575 3928970 -195701180 - LTR24C LTR ERV1 -204 431 34 1449 192 7 23 chr5 3928970 3929272 -195700878 - AluJo SINE Alu -15 297 1 2055 178 40 40 chr5 3929272 3929303 -195700847 - LTR24C LTR ERV1 -600 35 5 1023 207 81 54 chr5 3929304 3929599 -195700551 + LTR16A1 LTR ERVL 100 402 -55 183 80 0 0 chr5 3929795 3929820 -195700330 + (ATG)n Simple_repeat Simple_repeat 2 26 0 803 146 0 31 chr5 3929844 3929974 -195700176 - FLAM_C SINE Alu -6 127 2 2247 144 11 0 chr5 3930428 3930776 -195699374 + L1PA12 LINE L1 5569 5920 -248 2196 102 0 0 chr5 3930776 3931070 -195699080 - AluSx SINE Alu -18 294 1 1242 155 81 27 chr5 3931092 3931350 -195698800 - L1MA9 LINE L1 -8 6304 6033 512 146 42 62 chr5 3931351 3931385 -195698765 - Tigger3(Golem) DNA MER2_type -511 2518 2485 865 94 0 36 chr5 3931385 3931523 -195698627 - FLAM_C SINE Alu 0 133 1 512 146 42 62 chr5 3931523 3931615 -195698535 - Tigger3(Golem) DNA MER2_type -544 2485 2393 2087 106 3 7 chr5 3931615 3931917 -195698233 - AluSq SINE Alu -12 301 1 512 146 42 62 chr5 3931917 3931933 -195698217 - Tigger3(Golem) DNA MER2_type -636 2393 2378 293 237 32 21 chr5 3931941 3932034 -195698116 - Tigger3(Golem) DNA MER2_type -2879 150 57 1138 212 73 64 chr5 3932409 3932767 -195697383 - MLT1A2 LTR MaLR -13 361 1 2174 153 18 45 chr5 3932809 3932983 -195697167 + MLT1B LTR MaLR 1 178 -212 2477 102 123 5 chr5 3932983 3933365 -195696785 - MSTA LTR MaLR -1 427 1 2174 153 18 45 chr5 3933365 3933589 -195696561 + MLT1B LTR MaLR 178 388 -2 499 244 42 0 chr5 3933589 3933708 -195696442 + MER20 DNA MER1_type 84 207 -12 2300 97 0 0 chr5 3933975 3934284 -195695866 + AluSx SINE Alu 1 309 -3 2520 46 0 0 chr5 3934432 3934737 -195695413 + AluY SINE Alu 1 305 -6 1329 176 24 41 chr5 3934866 3935161 -195694989 - AluJo SINE Alu -22 290 1 287 297 169 17 chr5 3936893 3937011 -195693139 - L2 LINE L2 0 3272 3137 2005 129 0 3 chr5 3937400 3937695 -195692455 - AluSx SINE Alu -18 294 1 1446 211 91 21 chr5 3937707 3938091 -195692059 - MLT1C LTR MaLR -56 411 1 1690 154 58 141 chr5 3938091 3938538 -195691612 - MLT1C-int LTR MaLR 0 1371 962 1648 174 3 13 chr5 3938881 3939180 -195690970 + AluJo SINE Alu 1 296 -16 1755 181 85 30 chr5 3939378 3939814 -195690336 + MLT1C LTR MaLR 1 460 -7 2437 176 18 31 chr5 3940153 3940385 -195689765 - L1P4 LINE L1 -456 5710 5477 1811 183 0 6 chr5 3940385 3940697 -195689453 - AluJo SINE Alu -2 310 1 2437 176 18 31 chr5 3940697 3941366 -195688784 - L1P4 LINE L1 -689 5477 4823 232 189 0 38 chr5 3941583 3941636 -195688514 + CT-rich Low_complexity Low_complexity 4 54 0 523 186 88 0 chr5 3942729 3942842 -195687308 - HAL1 LINE L1 -754 1753 1631 1015 177 4 44 chr5 3942912 3943138 -195687012 - AluJo SINE Alu -9 303 87 1534 180 7 26 chr5 3943927 3944233 -195685917 + AluJo SINE Alu 1 300 -12 2602 83 13 44 chr5 3944397 3944616 -195685534 - THE1C LTR MaLR 0 375 172 2348 40 13 3 chr5 3944616 3944914 -195685236 + AluY SINE Alu 1 301 -10 2602 83 13 44 chr5 3944914 3945081 -195685069 - THE1C LTR MaLR -203 172 1 1084 216 194 14 chr5 3945177 3945542 -195684608 - MER74B LTR ERVL 0 622 192 941 172 0 0 chr5 3945646 3945803 -195684347 - MLT1B LTR MaLR -42 348 192 1565 185 3 20 chr5 3945986 3946169 -195683981 - AluSx SINE Alu -21 291 113 2260 107 51 23 chr5 3946169 3946523 -195683627 - THE1B LTR MaLR 0 364 1 1565 185 3 20 chr5 3946523 3946631 -195683519 - AluSx SINE Alu -199 113 5 2089 124 3 0 chr5 3946866 3947172 -195682978 - AluSx SINE Alu -5 307 1 1728 129 0 15 chr5 3947181 3947445 -195682705 - AluSx SINE Alu -11 301 42 1031 166 0 0 chr5 3948190 3948365 -195681785 + FRAM SINE Alu 1 172 -4 607 166 31 43 chr5 3948365 3948512 -195681638 - MER3 DNA MER1_type -81 128 1 2296 82 10 3 chr5 3948550 3948856 -195681294 + AluSx SINE Alu 1 308 -4 780 217 12 6 chr5 3949101 3949262 -195680888 - MER58A DNA MER1_type -32 192 31 2026 121 27 0 chr5 3950256 3950553 -195679597 + AluSx SINE Alu 1 305 -7 1412 155 64 4 chr5 3950556 3950820 -195679330 - L1MB7 LINE L1 -22 6162 5883 1388 221 105 41 chr5 3950829 3951096 -195679054 - MSTD LTR MaLR -11 385 88 1448 123 0 120 chr5 3951096 3951437 -195678713 - AluSg SINE Alu 0 300 1 1388 221 105 41 chr5 3951437 3951531 -195678619 - MSTD LTR MaLR -308 88 1 1863 168 10 54 chr5 3951531 3951750 -195678400 - L1MB7 LINE L1 -291 5893 5697 1845 161 3 0 chr5 3951750 3952061 -195678089 - AluJo SINE Alu 0 312 1 1863 168 10 54 chr5 3952061 3952229 -195677921 - L1MB7 LINE L1 -487 5697 5523 284 0 28 0 chr5 3952330 3952366 -195677784 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 258 312 74 40 chr5 3952608 3952810 -195677340 - MIR SINE MIR -7 255 47 30 45 0 0 chr5 3953848 3953892 -195676258 + AT_rich Low_complexity Low_complexity 1 44 0 3530 192 41 15 chr5 3953958 3954709 -195675441 - L1MA9 LINE L1 -38 6274 5504 266 225 14 14 chr5 3955217 3955288 -195674862 + MER103 DNA DNA 16 86 -80 522 280 108 20 chr5 3955915 3956165 -195673985 - L2 LINE L2 0 3313 3042 1586 266 132 48 chr5 3956297 3956791 -195673359 + MER69B DNA AcHobo 173 624 -1902 2138 69 49 0 chr5 3956791 3957079 -195673071 - AluY SINE Alu -9 302 1 1586 266 132 48 chr5 3957079 3957514 -195672636 + MER69B DNA AcHobo 624 1180 -46 2069 137 39 28 chr5 3957717 3958154 -195671996 + L1PA16 LINE L1 5725 6166 0 2084 139 0 0 chr5 3958260 3958570 -195671580 - AluSg SINE Alu 0 310 1 217 380 10 0 chr5 3960323 3960423 -195669727 + MIR SINE MIR 156 256 -6 2131 125 24 40 chr5 3960940 3961317 -195668833 + THE1C LTR MaLR 3 373 -2 1308 223 3 25 chr5 3964000 3964369 -195665781 + AluJb SINE Alu 1 362 0 1321 139 9 5 chr5 3964486 3964702 -195665448 + AluSq SINE Alu 97 313 0 2495 159 10 18 chr5 3964703 3965194 -195664956 + L1PA11 LINE L1 4416 4902 -1244 1852 130 3 0 chr5 3965194 3965479 -195664671 - AluSx SINE Alu 0 312 27 6162 109 3 14 chr5 3965525 3966800 -195663350 + L1PA11 LINE L1 4894 6161 -13 2148 274 85 15 chr5 3966847 3968016 -195662134 + L1MC1 LINE L1 2207 3456 -2690 341 280 21 0 chr5 3968026 3968119 -195662031 + MER2 DNA MER2_type 1 95 -250 224 185 31 0 chr5 3968123 3968188 -195661962 + (TA)n Simple_repeat Simple_repeat 1 67 0 367 186 0 0 chr5 3968278 3968337 -195661813 - MER2 DNA MER2_type -286 59 1 * 448 241 154 23 chr5 3968337 3968556 -195661594 + MER2 DNA MER2_type 97 344 -1 212 161 48 0 chr5 3969088 3969150 -195661000 + (TA)n Simple_repeat Simple_repeat 1 65 0 359 203 0 0 chr5 3969240 3969299 -195660851 - MER2 DNA MER2_type -286 59 1 * 420 241 176 23 chr5 3969299 3969514 -195660636 + MER2 DNA MER2_type 97 344 -1 4929 237 24 30 chr5 3969522 3970971 -195659179 + L1MC1 LINE L1 3480 4919 -1227 3833 190 44 17 chr5 3970977 3971934 -195658216 + L1MC1 LINE L1 5083 6063 -270 478 258 33 0 chr5 3971943 3972063 -195658087 - MER69 DNA AcHobo -1064 162 39 455 167 20 0 chr5 3975844 3976042 -195654108 - L1MA4A LINE L1 -4 6299 6037 2293 114 2 48 chr5 3976169 3976589 -195653561 - L1PA11 LINE L1 -54 6120 5720 * 3886 173 11 7 chr5 3976588 3976619 -195653531 - L1MA4A LINE L1 -265 6038 6009 1462 163 37 55 chr5 3976619 3977000 -195653150 + THE1C LTR MaLR 1 374 -1 3886 173 11 7 chr5 3977000 3978114 -195652036 - L1MA4A LINE L1 -294 6009 4885 2265 107 3 3 chr5 3981863 3982162 -195647988 + AluSq SINE Alu 1 299 -14 479 280 81 5 chr5 3982584 3982770 -195647380 + MER3 DNA MER1_type 6 205 -4 739 160 35 0 chr5 3983000 3983259 -195646891 + (TCTA)n Simple_repeat Simple_repeat 1 268 0 336 323 134 8 chr5 3983260 3983632 -195646518 + L1ME4a LINE L1 5555 5973 -148 4214 180 42 37 chr5 3985934 3987313 -195642837 + L1MA7 LINE L1 4901 6290 -1 552 306 69 26 chr5 3987529 3987918 -195642232 - MLT1I LTR MaLR -3 406 1 574 284 101 45 chr5 3987946 3988301 -195641849 + MLT1L LTR MaLR 241 615 0 883 295 157 14 chr5 3989971 3990398 -195639752 + MLT1D LTR MaLR 1 488 -17 2574 153 0 16 chr5 3991979 3992410 -195637740 + MSTA LTR MaLR 1 424 -4 666 189 0 0 chr5 3992432 3992543 -195637607 + FLAM_C SINE Alu 5 115 -18 413 19 19 0 chr5 3992562 3992616 -195637534 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 279 0 0 0 chr5 3992615 3992646 -195637504 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 234 0 0 0 chr5 3992645 3992671 -195637479 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 243 0 0 0 chr5 3992670 3992697 -195637453 + (GA)n Simple_repeat Simple_repeat 2 28 0 340 347 34 29 chr5 3993380 3993619 -195636531 + L1MC4a LINE L1 5645 5884 -1924 373 303 23 8 chr5 3994154 3994286 -195635864 + MER94 DNA DNA 1 134 0 269 276 17 60 chr5 3994350 3994466 -195635684 + L2 LINE L2 3203 3313 0 280 344 104 6 chr5 3994798 3994961 -195635189 + MER5A DNA MER1_type 7 185 -4 1278 228 155 54 chr5 3995708 3996134 -195634016 + MLT2B1 LTR ERVL 2 470 -50 258 91 91 0 chr5 3996170 3996214 -195633936 + MLT2D LTR ERVL 367 414 0 305 254 155 21 chr5 3998176 3998253 -195631897 - LTR50 LTR ERVL -2 793 728 1884 211 30 30 chr5 3998253 3998717 -195631433 + MLT1C LTR MaLR 4 467 0 305 254 155 21 chr5 3998717 3998832 -195631318 - LTR50 LTR ERVL -67 728 575 516 294 21 6 chr5 3999564 3999744 -195630406 + MLT1B LTR MaLR 189 382 -8 21 57 0 0 chr5 4001530 4001565 -195628585 + AT_rich Low_complexity Low_complexity 1 35 0 194 0 39 0 chr5 4001915 4001941 -195628209 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 210 265 0 36 chr5 4004650 4004733 -195625417 + C-rich Low_complexity Low_complexity 4 83 0 183 176 29 15 chr5 4008167 4008235 -195621915 + G-rich Low_complexity Low_complexity 3 71 0 29 28 0 0 chr5 4008406 4008442 -195621708 + GC_rich Low_complexity Low_complexity 1 36 0 36 102 0 0 chr5 4008589 4008716 -195621434 + GC_rich Low_complexity Low_complexity 1 127 0 224 149 21 0 chr5 4011597 4011644 -195618506 + CT-rich Low_complexity Low_complexity 1 48 0 25 65 0 0 chr5 4012403 4012449 -195617701 + GC_rich Low_complexity Low_complexity 1 46 0 291 113 0 0 chr5 4013888 4013941 -195616209 + (TG)n Simple_repeat Simple_repeat 1 53 0 235 291 0 29 chr5 4015387 4015490 -195614660 + (CGGGG)n Simple_repeat Simple_repeat 5 104 0 692 244 122 13 chr5 4018431 4018661 -195611489 - ORSL DNA AcHobo -17 258 4 311 0 26 0 chr5 4019513 4019552 -195610598 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 4020052 4020073 -195610077 + AT_rich Low_complexity Low_complexity 1 21 0 194 62 31 0 chr5 4022752 4022784 -195607366 + (TG)n Simple_repeat Simple_repeat 1 33 0 371 254 59 25 chr5 4022917 4023035 -195607115 - MER5A DNA MER1_type -35 154 33 22 35 0 0 chr5 4023748 4023777 -195606373 + AT_rich Low_complexity Low_complexity 1 29 0 2158 127 0 19 chr5 4024097 4024412 -195605738 + AluSx SINE Alu 1 309 -3 479 94 0 0 chr5 4024470 4024534 -195605616 - AluSq/x SINE Alu -184 129 66 542 151 0 0 chr5 4024635 4024721 -195605429 + AluSg/x SINE Alu 213 298 -12 1496 174 89 11 chr5 4026972 4027253 -195602897 - AluJo SINE Alu -3 309 7 416 291 135 38 chr5 4027581 4027921 -195602229 + L3 LINE CR1 1204 1576 -1 540 258 56 50 chr5 4033492 4033690 -195596460 + MER20 DNA MER1_type 17 215 -4 277 176 69 98 chr5 4034235 4034337 -195595813 + MIR SINE MIR 38 136 -72 198 103 0 0 chr5 4036512 4036541 -195593609 + (TA)n Simple_repeat Simple_repeat 1 29 0 351 326 40 0 chr5 4036654 4036878 -195593272 + L1ME4a LINE L1 5710 5942 -179 2297 125 8 40 chr5 4037702 4038078 -195592072 - THE1B LTR MaLR 0 364 1 1998 157 3 6 chr5 4038759 4039072 -195591078 - AluJb SINE Alu 0 312 1 775 311 136 44 chr5 4040088 4041147 -195589003 + L2 LINE L2 1478 2633 -681 189 0 0 0 chr5 4041250 4041271 -195588879 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 541 187 60 26 chr5 4041409 4041678 -195588472 + MLT1A1 LTR MaLR 12 353 -12 228 310 60 69 chr5 4041907 4042023 -195588127 - MIR SINE MIR -88 174 60 336 270 173 9 chr5 4042032 4042350 -195587800 - LTR16A LTR ERVL -15 435 66 288 0 0 0 chr5 4043896 4043928 -195586222 + (GA)n Simple_repeat Simple_repeat 1 32 0 204 129 81 16 chr5 4044256 4044318 -195585832 + CT-rich Low_complexity Low_complexity 2 67 0 403 209 18 0 chr5 4044432 4044542 -195585608 + CT-rich Low_complexity Low_complexity 4 115 0 304 264 19 38 chr5 4044555 4044661 -195585489 - L1M4 LINE L1 -2962 3184 3081 234 0 0 0 chr5 4044662 4044688 -195585462 + (TC)n Simple_repeat Simple_repeat 1 26 0 1487 194 33 33 chr5 4044690 4044989 -195585161 - AluJb SINE Alu -12 300 2 194 318 15 15 chr5 4045621 4045687 -195584463 - L2 LINE L2 -3 3269 3204 198 305 19 110 chr5 4045716 4045789 -195584361 + L2 LINE L2 2453 2507 -807 1977 113 0 39 chr5 4045789 4046095 -195584055 - AluSc SINE Alu 0 303 9 198 305 19 110 chr5 4046095 4046174 -195583976 + L2 LINE L2 2507 2592 -722 1711 158 15 75 chr5 4047046 4047230 -195582920 + MLT1B LTR MaLR 1 148 -242 2298 88 0 14 chr5 4047230 4047527 -195582623 + AluY SINE Alu 1 293 -18 1711 158 15 75 chr5 4047527 4047753 -195582397 + MLT1B LTR MaLR 148 386 -4 1402 211 62 9 chr5 4048180 4048516 -195581634 + MLT1A1 LTR MaLR 12 365 0 734 222 48 0 chr5 4048566 4048755 -195581395 + L1MC1 LINE L1 6129 6326 -7 576 289 10 102 chr5 4049811 4050709 -195579441 + TAR1 Satellite telomeric 1 816 -777 442 263 70 36 chr5 4051014 4051242 -195578908 - MLT1D LTR MaLR 0 467 261 1852 204 13 35 chr5 4051292 4051743 -195578407 - L1MB1 LINE L1 -39 6129 5689 433 244 19 39 chr5 4051739 4051940 -195578210 + L1M4c LINE L1 2163 2365 -3781 * 344 167 0 0 chr5 4051923 4051989 -195578161 + L1M2 LINE L1 5590 5655 -636 * 2048 152 0 10 chr5 4052019 4052321 -195577829 - AluSx SINE Alu -13 299 1 525 222 58 58 chr5 4052326 4052515 -195577635 - MLT1D LTR MaLR -313 192 4 2211 100 14 0 chr5 4052902 4053193 -195576957 - AluSc SINE Alu -14 295 1 326 262 6 139 chr5 4053491 4053663 -195576487 - MER5A DNA MER1_type -2 187 39 282 204 0 0 chr5 4110740 4110789 -195519361 - L1MA7 LINE L1 -225 6066 6018 2127 104 0 3 chr5 4110806 4111105 -195519045 - AluSx SINE Alu -13 299 2 1113 216 69 69 chr5 4111340 4111390 -195518760 + LTR16A1 LTR ERVL 56 105 -352 3160 174 37 29 chr5 4111390 4111984 -195518166 - LTR24C LTR ERV1 0 635 34 1449 192 7 23 chr5 4111984 4112286 -195517864 - AluJo SINE Alu -15 297 1 3160 174 37 29 chr5 4112286 4112317 -195517833 - LTR24C LTR ERV1 -601 34 5 1113 216 69 69 chr5 4112317 4112613 -195517537 + LTR16A1 LTR ERVL 104 402 -55 183 80 0 0 chr5 4112808 4112833 -195517317 + (ATG)n Simple_repeat Simple_repeat 2 26 0 803 146 0 31 chr5 4112857 4112987 -195517163 - FLAM_C SINE Alu -6 127 2 2269 141 11 0 chr5 4113441 4113789 -195516361 + L1PA12 LINE L1 5569 5920 -248 2205 99 0 0 chr5 4113789 4114083 -195516067 - AluSx SINE Alu -18 294 1 1521 139 51 0 chr5 4114105 4114378 -195515772 - L1MA9 LINE L1 -8 6304 6018 865 94 0 36 chr5 4114398 4114536 -195515614 - FLAM_C SINE Alu 0 133 1 556 122 28 19 chr5 4114538 4114628 -195515522 - Tigger3(Golem) DNA MER2_type -544 2485 2392 2087 106 3 7 chr5 4114628 4114930 -195515220 - AluSq SINE Alu -12 301 1 556 122 28 19 chr5 4114930 4114946 -195515204 - Tigger3(Golem) DNA MER2_type -637 2392 2378 853 208 0 7 chr5 4114956 4115105 -195515045 - Tigger3(Golem) DNA MER2_type -2881 148 1 2146 145 62 31 chr5 4115356 4115776 -195514374 + Tigger2a DNA MER2_type 2 434 0 216 97 0 0 chr5 4116470 4116501 -195513649 + (CGCGG)n Simple_repeat Simple_repeat 1 31 0 2307 89 0 0 chr5 4117187 4117491 -195512659 + AluSx SINE Alu 1 304 -8 2243 100 0 0 chr5 4118054 4118354 -195511796 - AluSx SINE Alu -12 300 1 200 369 63 9 chr5 4118431 4118542 -195511608 - L2 LINE L2 -6 3307 3191 2089 124 3 0 chr5 4118884 4119190 -195510960 - AluSx SINE Alu -5 307 1 1728 129 0 15 chr5 4119199 4119463 -195510687 - AluSx SINE Alu -11 301 42 1119 166 0 0 chr5 4120208 4120383 -195509767 + FRAM SINE Alu 1 172 -4 607 163 32 46 chr5 4120383 4120530 -195509620 - MER3 DNA MER1_type -63 146 1 2449 82 10 3 chr5 4120568 4120874 -195509276 + AluSx SINE Alu 1 308 -4 732 217 12 6 chr5 4121119 4121280 -195508870 - MER58A DNA MER1_type -32 192 31 2173 121 27 0 chr5 4122274 4122571 -195507579 + AluSx SINE Alu 1 305 -7 1336 159 64 4 chr5 4122574 4122838 -195507312 - L1MB7 LINE L1 -22 6162 5883 1299 227 106 28 chr5 4122847 4123109 -195507041 - MSTD LTR MaLR -11 385 86 2351 112 0 0 chr5 4123109 4123414 -195506736 - AluSg SINE Alu -5 305 1 1299 227 106 28 chr5 4123414 4123508 -195506642 - MSTD LTR MaLR -310 86 1 1944 171 9 50 chr5 4123508 4123727 -195506423 - L1MB7 LINE L1 -291 5893 5698 1999 161 3 0 chr5 4123727 4124038 -195506112 - AluJo SINE Alu 0 312 1 1944 171 9 50 chr5 4124038 4124240 -195505910 - L1MB7 LINE L1 -486 5698 5489 2258 92 45 3 chr5 4124481 4124773 -195505377 + AluSx SINE Alu 1 304 -8 1273 129 0 0 chr5 4124773 4124943 -195505207 + AluSg/x SINE Alu 134 303 -9 2366 90 0 10 chr5 4124946 4125246 -195504904 + AluSg1 SINE Alu 12 308 -1 192 125 0 0 chr5 4125271 4125303 -195504847 + (TA)n Simple_repeat Simple_repeat 2 33 0 212 220 0 20 chr5 4125441 4125491 -195504659 + (TA)n Simple_repeat Simple_repeat 1 49 0 1818 125 0 4 chr5 4125819 4126067 -195504083 - AluSx SINE Alu -17 295 49 1746 156 0 51 chr5 4126360 4126674 -195503476 - AluJo SINE Alu -14 298 1 495 186 88 0 chr5 4127398 4127511 -195502639 - HAL1 LINE L1 -754 1753 1631 1126 177 4 44 chr5 4127581 4127807 -195502343 - AluJo SINE Alu -9 303 87 197 331 24 113 chr5 4128198 4128322 -195501828 - MIR SINE MIR -148 114 2 1682 180 7 26 chr5 4128586 4128892 -195501258 + AluJo SINE Alu 1 300 -12 186 174 184 82 chr5 4128985 4129056 -195501094 + L2 LINE L2 3202 3287 -26 2622 83 13 44 chr5 4129056 4129275 -195500875 - THE1C LTR MaLR 0 375 172 2681 27 7 3 chr5 4129275 4129575 -195500575 + AluY SINE Alu 1 301 -10 2622 83 13 44 chr5 4129575 4129742 -195500408 - THE1C LTR MaLR -203 172 1 186 174 184 82 chr5 4129742 4129768 -195500382 + L2 LINE L2 3287 3309 -4 1012 223 195 11 chr5 4129838 4130202 -195499948 - MER74B LTR ERVL 0 622 192 907 166 0 0 chr5 4130306 4130463 -195499687 - MLT1B LTR MaLR -42 348 192 1811 175 3 20 chr5 4130646 4130829 -195499321 - AluSx SINE Alu -21 291 113 2254 107 51 25 chr5 4130829 4131184 -195498966 - THE1B LTR MaLR 0 364 1 1811 175 3 20 chr5 4131184 4131292 -195498858 - AluSx SINE Alu -199 113 5 1860 138 97 13 chr5 4131973 4132284 -195497866 + MER1B DNA MER1_type 1 337 0 404 319 129 5 chr5 4132377 4132587 -195497563 + L2 LINE L2 2484 2719 -595 1562 167 24 37 chr5 4133476 4133770 -195496380 + AluJo SINE Alu 1 290 -22 2699 45 0 0 chr5 4133895 4134204 -195495946 - AluY SINE Alu -2 309 1 2453 97 0 0 chr5 4134352 4134661 -195495489 - AluSx SINE Alu -3 309 1 473 198 47 0 chr5 4134932 4135038 -195495112 - MER20 DNA MER1_type -16 203 93 2045 153 18 45 chr5 4135047 4135271 -195494879 - MLT1B LTR MaLR -2 388 178 2504 102 123 5 chr5 4135271 4135653 -195494497 + MSTA LTR MaLR 1 427 -1 2045 153 18 45 chr5 4135653 4135827 -195494323 - MLT1B LTR MaLR -212 178 1 1148 233 76 22 chr5 4135869 4136225 -195493925 + MLT1B LTR MaLR 1 375 -15 267 30 0 0 chr5 4136237 4136270 -195493880 - MER20 DNA MER1_type -162 57 25 243 377 50 23 chr5 4136338 4136680 -195493470 - L2 LINE L2 -339 2975 2625 554 203 73 0 chr5 4136724 4136847 -195493303 - MER68 LTR ERV1 0 562 431 2316 126 0 3 chr5 4136850 4137160 -195492990 + AluSx SINE Alu 2 310 -2 1577 179 90 18 chr5 4137161 4137327 -195492823 - MSTB1 LTR MaLR -59 373 220 186 43 0 0 chr5 4137327 4137350 -195492800 + (GGGAA)n Simple_repeat Simple_repeat 1 23 0 1577 179 90 18 chr5 4137350 4137518 -195492632 - MSTB1 LTR MaLR -212 220 15 1200 171 18 0 chr5 4137518 4137735 -195492415 - MER68 LTR ERV1 -341 221 1 1561 125 79 0 chr5 4137771 4138011 -195492139 + AluJo SINE Alu 31 289 -23 279 294 160 17 chr5 4138071 4138190 -195491960 - L2 LINE L2 0 3272 3137 2088 128 0 10 chr5 4138582 4138880 -195491270 - AluSx SINE Alu -17 295 1 1291 206 88 28 chr5 4138892 4139280 -195490870 - MLT1C LTR MaLR -56 411 1 1676 154 59 131 chr5 4139280 4139722 -195490428 - MLT1C-int LTR MaLR 0 1371 962 1794 174 3 13 chr5 4140039 4140338 -195489812 + AluJo SINE Alu 1 296 -16 1068 179 111 46 chr5 4140536 4140887 -195489263 + MLT1C LTR MaLR 1 374 -93 213 39 0 0 chr5 4140988 4141014 -195489136 + (TG)n Simple_repeat Simple_repeat 1 26 0 303 280 0 0 chr5 4141089 4141232 -195488918 + (TG)n Simple_repeat Simple_repeat 2 144 0 1943 168 3 3 chr5 4142207 4142511 -195487639 - AluJb SINE Alu -8 304 1 198 240 93 27 chr5 4142646 4142721 -195487429 - L2 LINE L2 -42 3271 3192 610 294 102 55 chr5 4144163 4144507 -195485643 - L1M4 LINE L1 -3411 2735 2376 549 286 52 31 chr5 4144530 4144722 -195485428 - MIR SINE MIR 0 262 67 243 103 0 0 chr5 4144766 4144805 -195485345 + (T)n Simple_repeat Simple_repeat 1 39 0 355 220 119 8 chr5 4144875 4145193 -195484957 - L1MC3 LINE L1 -114 6048 5732 * 1228 175 0 87 chr5 4145188 4145522 -195484628 - L1MA8 LINE L1 -296 5866 5560 377 292 11 22 chr5 4146510 4146688 -195483462 - L1M4 LINE L1 -3108 3038 2863 726 179 14 0 chr5 4146711 4146851 -195483299 - L1ME2 LINE L1 -9 6155 6014 2338 108 0 3 chr5 4147088 4147394 -195482756 + AluSx SINE Alu 1 305 -7 1895 103 0 8 chr5 4147561 4147803 -195482347 - AluSc SINE Alu -69 240 1 1728 183 16 21 chr5 4147804 4148187 -195481963 - L1MA8 LINE L1 -1156 4990 4610 915 222 36 0 chr5 4148177 4148402 -195481748 - L1M4 LINE L1 -1598 4548 4316 * 2258 110 3 0 chr5 4248785 4249093 -195381057 + AluSc SINE Alu 1 309 0 25 0 0 0 chr5 4249267 4249292 -195380858 + AT_rich Low_complexity Low_complexity 1 25 0 946 53 26 7 chr5 4249376 4249527 -195380623 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 227 323 23 0 chr5 4249648 4249778 -195380372 - L2 LINE L2 -1635 1679 1547 208 143 0 0 chr5 4250055 4250090 -195380060 + (TTA)n Simple_repeat Simple_repeat 3 37 0 955 256 32 18 chr5 4250430 4250715 -195379435 - L1MD1 LINE L1 -170 6072 5784 1781 243 92 66 chr5 4251416 4252487 -195377663 + L1ME2 LINE L1 5045 6156 -8 25 31 0 0 chr5 4252573 4252605 -195377545 + AT_rich Low_complexity Low_complexity 1 32 0 277 311 86 8 chr5 4252808 4253065 -195377085 + L1ME4a LINE L1 2279 2555 -3591 295 173 123 48 chr5 4253210 4253408 -195376742 + MER5C DNA MER1_type 47 323 -1 232 295 36 7 chr5 4253409 4253548 -195376602 + L1ME4a LINE L1 2689 2831 -3315 543 271 74 17 chr5 4253836 4254217 -195375933 + L1ME4a LINE L1 5209 5607 -555 6477 67 26 1 chr5 4254334 4255999 -195374151 + L1PA7 LINE L1 4455 6154 0 2027 127 0 7 chr5 4256172 4256464 -195373686 + AluSx SINE Alu 1 290 -22 918 121 0 73 chr5 4258688 4258853 -195371297 + Charlie3 DNA MER1_type 2550 2702 -8 311 279 16 16 chr5 4258880 4259002 -195371148 + L1ME4a LINE L1 5762 5883 -238 372 309 90 18 chr5 4260414 4260637 -195369513 - MLT1J2 LTR MaLR -158 292 54 1142 224 86 45 chr5 4261155 4261315 -195368835 + L1MC1 LINE L1 4341 4493 -1653 2045 93 0 0 chr5 4261315 4261603 -195368547 + AluSq SINE Alu 35 322 0 1142 224 86 45 chr5 4261603 4261906 -195368244 + L1MC1 LINE L1 4493 4824 -1322 4628 153 31 7 chr5 4261934 4262802 -195367348 + L1MC1 LINE L1 5356 6244 -89 2306 128 0 0 chr5 4263488 4263800 -195366350 - AluSx SINE Alu 0 312 1 297 311 37 6 chr5 4263938 4264102 -195366048 + LTR16A LTR ERVL 205 373 -77 2343 60 0 3 chr5 4264236 4264557 -195365593 - AluY SINE Alu 0 320 1 286 229 42 42 chr5 4264754 4264898 -195365252 - L1MCc LINE L1 -6256 167 24 1272 132 0 0 chr5 4266320 4266502 -195363648 + AluSg/x SINE Alu 131 312 0 21 0 0 0 chr5 4267014 4267035 -195363115 + AT_rich Low_complexity Low_complexity 1 21 0 748 207 17 17 chr5 4267267 4267441 -195362709 + MLT1A2 LTR MaLR 1 174 -200 235 208 0 0 chr5 4267457 4267510 -195362640 + CT-rich Low_complexity Low_complexity 1 53 0 1826 234 42 22 chr5 4267636 4268088 -195362062 + MLT1A2-int LTR MaLR 1271 1731 -4 1246 243 38 30 chr5 4268092 4268463 -195361687 + MLT1A2 LTR MaLR 1 374 0 328 273 79 36 chr5 4270109 4270248 -195359902 - MIR SINE MIR -1 261 117 359 179 64 0 chr5 4270560 4270638 -195359512 - L1MC1 LINE L1 -8 6325 6243 1507 115 42 0 chr5 4270640 4270857 -195359293 + THE1B LTR MaLR 1 226 -138 2071 108 0 10 chr5 4271406 4271702 -195358448 - AluSc SINE Alu -16 293 1 2136 66 0 0 chr5 4272816 4273088 -195357062 - AluY SINE Alu -6 305 34 21 57 0 0 chr5 4273210 4273245 -195356905 + AT_rich Low_complexity Low_complexity 1 35 0 1897 136 0 0 chr5 4274979 4275252 -195354898 + AluSg SINE Alu 1 273 -37 246 309 59 26 chr5 4275306 4275458 -195354692 - LTR67 LTR ERVL -255 302 146 * 247 182 121 30 chr5 4275416 4275482 -195354668 - MLT1K LTR MaLR -325 263 192 234 91 0 0 chr5 4276321 4276354 -195353796 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 499 339 47 4 chr5 4276495 4276731 -195353419 - L1M4 LINE L1 -1273 4873 4628 289 291 11 60 chr5 4276779 4276992 -195353158 - L1MDb LINE L1 -5008 1401 1202 1350 218 92 12 chr5 4276992 4277327 -195352823 + MLT1A1 LTR MaLR 4 365 0 289 291 11 60 chr5 4277327 4277381 -195352769 - L1MDb LINE L1 -5207 1202 1147 24471 128 16 77 chr5 4278358 4281402 -195348748 + L1P LINE L1 12 2676 -3470 2151 113 0 0 chr5 4281402 4281703 -195348447 + AluY SINE Alu 1 301 -10 24471 128 16 77 chr5 4281703 4283324 -195346826 + L1P LINE L1 2676 4394 -1752 206 45 15 159 chr5 4283493 4283694 -195346456 + (CACAT)n Simple_repeat Simple_repeat 5 176 0 270 29 0 162 chr5 4283712 4283916 -195346234 + (CACAT)n Simple_repeat Simple_repeat 1 171 0 * 376 364 0 0 chr5 4283782 4284080 -195346070 + C-rich Low_complexity Low_complexity 1 298 0 3726 47 0 4 chr5 4285942 4286392 -195343758 - LTR7 LTR ERV1 -2 448 1 1525 171 25 0 chr5 4286721 4287002 -195343148 + AluJb SINE Alu 1 288 -24 269 176 29 0 chr5 4287002 4287070 -195343080 + (TA)n Simple_repeat Simple_repeat 1 70 0 309 295 76 63 chr5 4287075 4287312 -195342838 - L1MCa LINE L1 -4212 2214 1975 646 272 55 10 chr5 4289321 4289523 -195340627 + MIR SINE MIR 51 261 -1 1495 82 5 0 chr5 4290097 4290303 -195339847 - AluY SINE Alu -94 217 11 22 56 0 0 chr5 4290437 4290473 -195339677 + AT_rich Low_complexity Low_complexity 1 36 0 2194 89 3 0 chr5 4290939 4291230 -195338920 + AluSp SINE Alu 1 292 -21 23 0 0 0 chr5 4291246 4291269 -195338881 + AT_rich Low_complexity Low_complexity 1 23 0 244 373 73 0 chr5 4291675 4291830 -195338320 + MIR SINE MIR 18 183 -58 28 0 0 0 chr5 4293349 4293377 -195336773 + AT_rich Low_complexity Low_complexity 1 28 0 264 314 34 3 chr5 4294120 4294222 -195335928 + MIR SINE MIR 31 134 -74 1996 120 6 28 chr5 4294495 4294812 -195335338 + AluSx SINE Alu 1 310 -2 359 288 155 30 chr5 4299208 4299614 -195330536 + L1ME4a LINE L1 5426 5882 -239 222 205 0 0 chr5 4300870 4300909 -195329241 + A-rich Low_complexity Low_complexity 5 43 0 601 203 9 6 chr5 4301042 4301389 -195328761 + (TCCA)n Simple_repeat Simple_repeat 1 347 0 388 315 136 69 chr5 4301420 4302348 -195327802 - L2 LINE L2 -4 3309 2310 354 234 0 0 chr5 4303014 4303121 -195327029 + (CCCA)n Simple_repeat Simple_repeat 3 109 0 184 297 109 62 chr5 4303359 4303436 -195326714 - L2 LINE L2 -58 3255 3183 2393 118 28 3 chr5 4303436 4303791 -195326359 + THE1B LTR MaLR 1 364 0 184 297 109 62 chr5 4303791 4303969 -195326181 - L2 LINE L2 -130 3183 2988 306 254 127 0 chr5 4305857 4305999 -195324151 - MLT1K LTR MaLR -66 522 363 1849 124 77 41 chr5 4306975 4307337 -195322813 + THE1C LTR MaLR 1 375 0 445 265 153 58 chr5 4308029 4308292 -195321858 + L2 LINE L2 2814 3131 -182 374 68 0 17 chr5 4308292 4308351 -195321799 + (TA)n Simple_repeat Simple_repeat 2 59 0 445 265 153 58 chr5 4308351 4308498 -195321652 + L2 LINE L2 3131 3263 -50 470 316 57 19 chr5 4309694 4309906 -195320244 - MIR SINE MIR -3 259 40 291 324 46 46 chr5 4310013 4310186 -195319964 - MIR SINE MIR -42 220 48 226 143 0 0 chr5 4311589 4311624 -195318526 - MER63 DNA MER1_type -333 728 694 183 184 0 0 chr5 4313406 4313444 -195316706 + CT-rich Low_complexity Low_complexity 1 38 0 478 198 27 0 chr5 4313492 4313603 -195316547 - L1MA7 LINE L1 -2 6289 6176 3797 234 19 42 chr5 4313704 4315232 -195314918 - L1P3 LINE L1 -4735 1140 4 1585 181 14 0 chr5 4315277 4315559 -195314591 - AluSx SINE Alu -17 295 10 207 277 84 12 chr5 4316447 4316530 -195313620 - MER91A DNA MER1_type -83 113 25 192 77 0 0 chr5 4317576 4317602 -195312548 + (CA)n Simple_repeat Simple_repeat 2 27 0 516 221 0 0 chr5 4317613 4317962 -195312188 + (CA)n Simple_repeat Simple_repeat 1 349 0 462 243 0 0 chr5 4317973 4318150 -195312000 + (CA)n Simple_repeat Simple_repeat 1 177 0 393 247 0 0 chr5 4318175 4318341 -195311809 + (CA)n Simple_repeat Simple_repeat 2 167 0 195 42 0 0 chr5 4318970 4318994 -195311156 + (CAAAG)n Simple_repeat Simple_repeat 1 24 0 195 333 23 11 chr5 4320814 4320901 -195309249 + L3b LINE CR1 1111 1198 -385 31 0 0 0 chr5 4320905 4320936 -195309214 + AT_rich Low_complexity Low_complexity 1 31 0 230 339 46 15 chr5 4321703 4321833 -195308317 - L2 LINE L2 -15 3298 3165 543 233 72 22 chr5 4321997 4322177 -195307973 - L1MC4 LINE L1 -1053 6989 6801 190 342 54 27 chr5 4322783 4322894 -195307256 + MIR3 SINE MIR 42 155 -53 2649 17 3 0 chr5 4322988 4323282 -195306868 + AluY SINE Alu 1 295 -16 236 337 0 33 chr5 4324670 4324762 -195305388 - L3 LINE CR1 -161 1416 1328 230 318 16 0 chr5 4324889 4324952 -195305198 + MIR SINE MIR 85 148 -114 195 171 0 43 chr5 4325589 4325659 -195304491 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 306 156 78 0 chr5 4325667 4325731 -195304419 - L1MCa LINE L1 -4362 2064 1996 1349 172 19 130 chr5 4325731 4326092 -195304058 - MER7A DNA MER2_type -16 330 12 506 257 32 30 chr5 4326198 4326211 -195303939 - L1MA7 LINE L1 -158 6133 6122 2344 85 7 0 chr5 4326211 4326504 -195303646 - AluY SINE Alu -16 295 1 506 257 32 30 chr5 4326504 4326660 -195303490 - L1MA7 LINE L1 -169 6122 5972 258 32 0 0 chr5 4326666 4326697 -195303453 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 2139 116 14 0 chr5 4327102 4327394 -195302756 + AluSx SINE Alu 1 296 -16 374 282 63 14 chr5 4328031 4328173 -195301977 + MIR SINE MIR 93 241 -21 1335 177 83 0 chr5 4329069 4329334 -195300816 + MER2 DNA MER2_type 1 287 -58 2062 87 4 0 chr5 4329375 4329640 -195300510 - L1PB1 LINE L1 0 6151 5886 252 306 28 0 chr5 4329645 4329717 -195300433 + MER2 DNA MER2_type 272 345 0 327 338 46 27 chr5 4329746 4329965 -195300185 + MIR SINE MIR 29 251 -11 312 91 0 0 chr5 4330009 4330053 -195300097 + (TC)n Simple_repeat Simple_repeat 1 44 0 1739 152 28 14 chr5 4332294 4332577 -195297573 - AluJb SINE Alu -25 287 1 523 342 126 23 chr5 4332598 4333041 -195297109 - L1ME3A LINE L1 -341 5829 5330 2688 96 36 14 chr5 4333041 4333397 -195296753 - THE1B LTR MaLR 0 364 1 523 342 126 23 chr5 4333397 4333439 -195296711 - L1ME3A LINE L1 -840 5330 5294 920 194 53 119 chr5 4333750 4334070 -195296080 - MLT1A2 LTR MaLR -50 324 26 754 212 232 10 chr5 4334086 4334388 -195295762 + L1ME3 LINE L1 5780 6148 -14 826 200 0 50 chr5 4334390 4334570 -195295580 - AluJb SINE Alu -6 306 136 23 0 0 0 chr5 4334674 4334697 -195295453 + AT_rich Low_complexity Low_complexity 1 23 0 1086 159 0 37 chr5 4334697 4334886 -195295264 - L1PA16 LINE L1 -9 6157 5976 522 287 94 40 chr5 4335221 4335757 -195294393 - L1MDa LINE L1 -3550 2579 2067 297 272 57 57 chr5 4336060 4336469 -195293681 - L1MDa LINE L1 -920 1609 1415 440 287 52 55 chr5 4336544 4336906 -195293244 - L1MDa LINE L1 -4864 1255 895 232 328 26 70 chr5 4337007 4337278 -195292872 - L1MDa LINE L1 -5301 818 560 1677 266 26 6 chr5 4337291 4337757 -195292393 - L1MD3 LINE L1 -10 7985 7511 368 339 23 0 chr5 4337768 4337898 -195292252 - L1MDa LINE L1 -5562 557 425 227 262 0 0 chr5 4338182 4338243 -195291907 - LTR66 LTR ERVL -152 458 398 27 29 0 0 chr5 4338247 4338281 -195291869 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr5 4338346 4338370 -195291780 + AT_rich Low_complexity Low_complexity 1 24 0 451 272 111 14 chr5 4338375 4338592 -195291558 + L1ME4a LINE L1 5636 5873 -248 477 244 134 0 chr5 4342136 4342308 -195287842 + MLT2F LTR ERVL 461 655 -8 524 236 6 0 chr5 4342339 4342517 -195287633 + (TG)n Simple_repeat Simple_repeat 1 179 0 1833 108 8 8 chr5 4344189 4344449 -195285701 - AluSg SINE Alu -19 291 32 2319 225 49 24 chr5 4346637 4347251 -195282899 + L1MB3 LINE L1 5539 6167 -16 203 146 24 0 chr5 4347292 4347333 -195282817 + CT-rich Low_complexity Low_complexity 1 42 0 681 171 28 6 chr5 4347361 4347537 -195282613 + CT-rich Low_complexity Low_complexity 1 180 0 255 195 0 0 chr5 4347537 4347578 -195282572 + polypyrimidine Low_complexity Low_complexity 1 41 0 749 165 24 10 chr5 4347578 4347846 -195282304 + CT-rich Low_complexity Low_complexity 1 271 0 896 140 11 11 chr5 4347874 4348053 -195282097 + CT-rich Low_complexity Low_complexity 2 180 0 419 132 0 85 chr5 4348341 4348447 -195281703 - L1MA7 LINE L1 -1 6290 6194 1217 273 52 11 chr5 4348547 4349009 -195281141 - L1M4 LINE L1 -1160 4986 4506 485 303 50 54 chr5 4349335 4349632 -195280518 - HAL1 LINE L1 -842 1665 1370 564 309 12 0 chr5 4349947 4350112 -195280038 + MIR SINE MIR 32 198 -64 237 118 0 0 chr5 4350621 4350655 -195279495 + (TC)n Simple_repeat Simple_repeat 1 34 0 342 242 13 19 chr5 4350656 4350813 -195279337 + CT-rich Low_complexity Low_complexity 4 159 0 2043 129 3 0 chr5 4352105 4352400 -195277750 + AluSx SINE Alu 1 296 -16 319 132 55 0 chr5 4352426 4352517 -195277633 + (TA)n Simple_repeat Simple_repeat 1 96 0 21 0 0 0 chr5 4352713 4352734 -195277416 + AT_rich Low_complexity Low_complexity 1 21 0 479 268 157 25 chr5 4354952 4355150 -195275000 + MIR SINE MIR 10 233 -29 1628 213 7 34 chr5 4355334 4355775 -195274375 + MLT2B3 LTR ERVL 5 481 -34 700 152 30 0 chr5 4355796 4355961 -195274189 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 681 184 11 17 chr5 4355984 4356163 -195273987 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 197 65 32 0 chr5 4356186 4356217 -195273933 + (TTTC)n Simple_repeat Simple_repeat 1 32 0 583 196 13 0 chr5 4356236 4356389 -195273761 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 325 117 17 33 chr5 4356390 4356450 -195273700 + MLT2B3 LTR ERVL 462 554 0 207 69 0 0 chr5 4356970 4356999 -195273151 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 4357568 4357590 -195272560 + AT_rich Low_complexity Low_complexity 1 22 0 884 241 50 70 chr5 4357829 4358334 -195271816 + MER34 LTR ERV1 6 585 0 379 236 36 9 chr5 4359151 4359261 -195270889 + MARNA DNA Mariner 266 378 -208 2271 100 0 13 chr5 4360031 4360340 -195269810 - AluSx SINE Alu -7 305 1 622 197 61 14 chr5 4361508 4361655 -195268495 + MLT1B LTR MaLR 8 161 -229 2743 89 22 32 chr5 4361662 4362067 -195268083 - L1PA13 LINE L1 0 6163 5763 1137 194 0 0 chr5 4362067 4362289 -195267861 + L1P LINE L1 5174 5395 -751 895 204 33 50 chr5 4362289 4362529 -195267621 + MLT1B LTR MaLR 143 378 -12 9391 164 21 5 chr5 4362726 4362746 -195267404 - L1P LINE L1 -2743 3403 3385 7353 131 10 51 chr5 4362746 4363444 -195266706 - L1PA10 LINE L1 0 6168 5443 613 100 0 0 chr5 4363444 4363524 -195266626 - MADE1 DNA Mariner 0 80 1 7353 131 10 51 chr5 4363524 4364897 -195265253 - L1PA10 LINE L1 -725 5443 4154 9391 164 21 5 chr5 4364897 4366607 -195263543 - L1P LINE L1 -2761 3385 1645 2131 149 6 6 chr5 4366614 4366943 -195263207 - THE1B LTR MaLR 0 364 36 542 15 15 0 chr5 4369254 4369321 -195260829 + (TTTTC)n Simple_repeat Simple_repeat 3 70 0 852 153 0 22 chr5 4369322 4369505 -195260645 + CT-rich Low_complexity Low_complexity 1 179 0 2245 147 3 5 chr5 4375668 4376035 -195254115 - L1PB1 LINE L1 -3 6148 5783 378 231 0 0 chr5 4376035 4376126 -195254024 + (TG)n Simple_repeat Simple_repeat 1 91 0 1360 116 1 20 chr5 4376126 4376363 -195253787 - L1PB1 LINE L1 -359 5792 5569 613 265 0 0 chr5 4376857 4377008 -195253142 - L1MB7 LINE L1 -16 6168 6018 1657 185 0 3 chr5 4379498 4379796 -195250354 - AluJo SINE Alu -1 311 15 1848 138 10 3 chr5 4380909 4381213 -195248937 + AluSx SINE Alu 1 306 -6 268 306 70 70 chr5 4382185 4382384 -195247766 + MIR SINE MIR 13 211 -51 358 303 6 43 chr5 4382854 4383016 -195247134 + L1PA10 LINE L1 5858 6013 -155 * 1668 191 57 37 chr5 4382888 4383290 -195246860 + L1MA4A LINE L1 5888 6297 -6 297 312 6 6 chr5 4383899 4384069 -195246081 + (TA)n Simple_repeat Simple_repeat 2 171 0 267 341 16 0 chr5 4384195 4384321 -195245829 + C-rich Low_complexity Low_complexity 6 133 0 233 245 0 7 chr5 4384324 4384475 -195245675 + (CA)n Simple_repeat Simple_repeat 1 150 0 216 111 0 0 chr5 4384575 4384611 -195245539 + (CA)n Simple_repeat Simple_repeat 1 36 0 2135 118 0 0 chr5 4387280 4387586 -195242564 + AluSq SINE Alu 2 307 -6 1918 228 150 110 chr5 4390371 4390927 -195239223 - L1MC3 LINE L1 -9 7776 7244 265 245 39 59 chr5 4390927 4391029 -195239121 - MLT1F1 LTR MaLR -434 133 34 1918 228 150 110 chr5 4391029 4391423 -195238727 - L1MC3 LINE L1 -541 7244 6683 204 118 29 0 chr5 4392150 4392184 -195237966 + GA-rich Low_complexity Low_complexity 2 36 0 544 249 169 80 chr5 4392274 4392553 -195237597 + MLT1H1 LTR MaLR 14 267 -288 580 288 25 0 chr5 4392553 4392751 -195237399 + MER105 DNA DNA 2 204 0 544 249 169 80 chr5 4392751 4392957 -195237193 + MLT1H1 LTR MaLR 267 542 -13 322 265 41 0 chr5 4394070 4394168 -195235982 + MIR SINE MIR 151 252 -10 1715 173 52 30 chr5 4394959 4395324 -195234826 + THE1C LTR MaLR 1 373 -2 9491 141 16 35 chr5 4395328 4396937 -195233213 + THE1C-int LTR MaLR 3 1580 0 1492 170 38 98 chr5 4396937 4397336 -195232814 + THE1C LTR MaLR 1 375 0 493 255 59 20 chr5 4399170 4399323 -195230827 + MER70B LTR ERVL 1 159 -419 * 2116 245 21 4 chr5 4399322 4399792 -195230358 + MER70B LTR ERVL 90 567 -11 331 212 29 7 chr5 4400075 4400212 -195229938 + GA-rich Low_complexity Low_complexity 2 141 0 468 175 0 0 chr5 4400313 4400410 -195229740 + GA-rich Low_complexity Low_complexity 2 98 0 267 299 11 0 chr5 4400988 4401075 -195229075 + (CA)n Simple_repeat Simple_repeat 1 88 0 2468 36 7 10 chr5 4403686 4403988 -195226162 - AluY SINE Alu -10 301 1 1367 203 6 37 chr5 4404043 4404364 -195225786 - AluJb SINE Alu -1 311 1 2045 101 0 4 chr5 4404554 4404831 -195225319 - AluSq SINE Alu -27 286 11 1866 120 0 33 chr5 4404978 4405277 -195224873 - AluSx SINE Alu -23 289 1 26 0 0 0 chr5 4405541 4405567 -195224583 + AT_rich Low_complexity Low_complexity 1 26 0 1702 173 0 13 chr5 4406052 4406358 -195223792 + AluSx SINE Alu 1 302 -10 1643 110 0 62 chr5 4406667 4406940 -195223210 + AluSg SINE Alu 49 304 -6 345 310 192 15 chr5 4407147 4407418 -195222732 + L1M4 LINE L1 5074 5392 -754 225 282 13 13 chr5 4458449 4458546 -195171604 + GA-rich Low_complexity Low_complexity 2 149 0 558 218 3 9 chr5 4460244 4460582 -195169568 + (TA)n Simple_repeat Simple_repeat 1 335 0 340 270 22 0 chr5 4460582 4460671 -195169479 - L1MC4 LINE L1 -1337 6705 6615 312 277 0 43 chr5 4460648 4460742 -195169408 + L1MC4 LINE L1 6614 6703 -1339 * 301 209 15 0 chr5 4460682 4460749 -195169401 - L1M4b LINE L1 -4363 2594 2527 * 1046 300 159 40 chr5 4460776 4462257 -195167893 - L2 LINE L2 -4 3309 1610 290 83 0 62 chr5 4463746 4463794 -195166356 + MLT2A2 LTR ERVL 399 443 -10 3646 225 38 25 chr5 4463816 4464762 -195165388 - L1MC3 LINE L1 -1160 6625 5668 675 218 86 47 chr5 4464755 4464974 -195165176 - L1M4b LINE L1 -4792 2165 1933 * 450 0 0 0 chr5 4464974 4465024 -195165126 + (TG)n Simple_repeat Simple_repeat 1 50 0 675 218 86 47 chr5 4465024 4465061 -195165089 - L1M4b LINE L1 -5024 1933 1899 1755 276 67 88 chr5 4465115 4466076 -195164074 - L1MCa LINE L1 -5103 942 3 421 223 78 105 chr5 4466091 4466188 -195163962 - L1M4b LINE L1 -5159 1788 1690 1886 147 29 0 chr5 4466188 4466467 -195163683 + AluSx SINE Alu 3 289 -23 421 223 78 105 chr5 4466467 4466701 -195163449 - L1M4b LINE L1 -5257 1690 1339 2417 146 5 16 chr5 4466938 4467315 -195162835 - THE1C LTR MaLR -2 373 1 2609 222 88 5 chr5 4467408 4468069 -195162081 + L1MD1 LINE L1 5518 6233 -9 21 71 0 0 chr5 4468544 4468586 -195161564 + AT_rich Low_complexity Low_complexity 1 42 0 627 218 156 0 chr5 4469634 4469813 -195160337 + MER20 DNA MER1_type 1 207 -12 1604 114 76 76 chr5 4469852 4470141 -195160009 - AluSx SINE Alu -23 289 1 1343 215 0 19 chr5 4470189 4470454 -195159696 + AluJo SINE Alu 1 260 -52 277 62 42 0 chr5 4473669 4473717 -195156433 + (TC)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr5 4476030 4476065 -195154085 + AT_rich Low_complexity Low_complexity 1 35 0 251 267 124 0 chr5 4476173 4476278 -195153872 + MER45A DNA AcHobo 61 178 0 597 249 0 0 chr5 4476933 4477110 -195153040 + (TG)n Simple_repeat Simple_repeat 2 178 0 260 184 0 0 chr5 4477135 4477184 -195152966 + MER4-int LTR ERV1 1114 1162 -5436 23 54 0 0 chr5 4478503 4478540 -195151610 + AT_rich Low_complexity Low_complexity 1 37 0 497 128 26 0 chr5 4478568 4478646 -195151504 + MER116 DNA Mariner 1 80 0 1606 164 7 31 chr5 4478728 4479044 -195151106 - AluJo SINE Alu 0 312 4 650 90 0 0 chr5 4479420 4479509 -195150641 - L1PA8 LINE L1 0 6172 6084 201 298 21 32 chr5 4479576 4479670 -195150480 - MIR SINE MIR -99 163 71 1803 196 17 6 chr5 4479945 4480298 -195149852 - MLT1A1 LTR MaLR -8 357 1 3078 118 18 11 chr5 4480758 4481199 -195148951 + MLT2A1 LTR ERVL 1 444 0 43342 84 7 9 chr5 4481199 4486866 -195143284 + HERVL-A1-A1 LTR ERVL 1 5654 0 3211 100 20 11 chr5 4486866 4487306 -195142844 + MLT2A1 LTR ERVL 1 444 0 269 82 20 0 chr5 4487348 4487397 -195142753 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 318 190 20 30 chr5 4488357 4488457 -195141693 + T-rich Low_complexity Low_complexity 6 104 0 360 0 0 0 chr5 4489400 4489440 -195140710 + (CA)n Simple_repeat Simple_repeat 2 41 0 2335 97 0 0 chr5 4489440 4489738 -195140412 - AluSp SINE Alu -12 301 4 1897 135 7 0 chr5 4490241 4490522 -195139628 + AluSx SINE Alu 23 305 -7 189 0 0 0 chr5 4490573 4490594 -195139556 + (T)n Simple_repeat Simple_repeat 1 21 0 534 296 87 27 chr5 4490896 4491230 -195138920 + MLT1H LTR MaLR 1 354 -195 22 0 0 0 chr5 4491413 4491435 -195138715 + AT_rich Low_complexity Low_complexity 1 22 0 2248 110 0 10 chr5 4491556 4491865 -195138285 - AluSx SINE Alu -6 306 1 191 408 14 7 chr5 4492255 4492402 -195137748 - MIR3 SINE MIR -41 167 20 339 25 0 0 chr5 4492521 4492561 -195137589 + (CA)n Simple_repeat Simple_repeat 2 41 0 1681 189 85 33 chr5 4492562 4493086 -195137064 + MLT2A2 LTR ERVL 2 549 -5 459 0 0 0 chr5 4493086 4493137 -195137013 + (CA)n Simple_repeat Simple_repeat 2 52 0 186 143 0 0 chr5 4493137 4493172 -195136978 + (GA)n Simple_repeat Simple_repeat 1 35 0 298 196 22 0 chr5 4493326 4493418 -195136732 + (TA)n Simple_repeat Simple_repeat 2 95 0 24 0 0 0 chr5 4493465 4493489 -195136661 + AT_rich Low_complexity Low_complexity 1 24 0 2220 113 0 7 chr5 4493499 4493799 -195136351 + AluSx SINE Alu 1 298 -14 9442 193 38 13 chr5 4493814 4499151 -195130999 + L1MC1 LINE L1 23 5659 -954 1494 116 5 14 chr5 4499151 4499367 -195130783 + AluSq SINE Alu 94 307 -6 9442 193 38 13 chr5 4499367 4500341 -195129809 + L1MC1 LINE L1 5659 6607 -6 6029 111 25 20 chr5 4505853 4506841 -195123309 + L1PA13 LINE L1 5168 6161 -2 1789 182 116 6 chr5 4507865 4508228 -195121922 - MER57A LTR ERV1 0 403 1 863 203 7 7 chr5 4509214 4509367 -195120783 + AluJb SINE Alu 137 289 -23 7307 161 74 5 chr5 4513129 4515597 -195114553 - L1MA3 LINE L1 0 6305 3657 180 0 0 0 chr5 4515997 4516017 -195114133 + (T)n Simple_repeat Simple_repeat 1 20 0 237 167 0 0 chr5 4517572 4517626 -195112524 + CT-rich Low_complexity Low_complexity 2 55 0 225 211 0 0 chr5 4517869 4517921 -195112229 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 318 106 0 0 chr5 4517933 4517980 -195112170 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr5 4518513 4518535 -195111615 + AT_rich Low_complexity Low_complexity 1 22 0 406 260 16 16 chr5 4519486 4519609 -195110541 + L2 LINE L2 3187 3309 -4 305 342 69 32 chr5 4520140 4520536 -195109614 + L3 LINE CR1 363 832 -745 325 378 67 11 chr5 4520830 4521097 -195109053 + L3 LINE CR1 1250 1531 -46 972 217 53 35 chr5 4521099 4521417 -195108733 + MER33 DNA MER1_type 1 324 0 302 306 20 0 chr5 4521434 4521532 -195108618 + MER5A DNA MER1_type 10 109 -80 462 110 82 0 chr5 4521908 4521981 -195108169 + MADE1 DNA Mariner 1 79 -1 306 115 0 0 chr5 4522475 4522527 -195107623 + (TG)n Simple_repeat Simple_repeat 1 52 0 1375 236 120 23 chr5 4523086 4523485 -195106665 - MER31B LTR ERV1 -28 438 1 2494 31 7 0 chr5 4523876 4524170 -195105980 - L1PA4 LINE L1 0 6155 5860 1204 179 25 122 chr5 4524427 4524780 -195105370 + MLT1A1 LTR MaLR 1 319 -46 372 291 50 50 chr5 4526922 4527142 -195103008 + MIR SINE MIR 13 232 -30 745 281 86 69 chr5 4530471 4531329 -195098821 + L1MEd LINE L1 427 1334 -4871 922 202 33 29 chr5 4532374 4532690 -195097460 + MSTD LTR MaLR 4 396 0 1323 0 0 0 chr5 4533555 4533699 -195096451 - L1PA2 LINE L1 -3 6152 6009 12879 28 1 0 chr5 4533700 4535217 -195094933 + L1P LINE L1 2926 4444 -1702 2220 200 22 16 chr5 4536322 4536811 -195093339 - L1MC3 LINE L1 -1 7784 7293 2315 244 47 31 chr5 4536834 4537360 -195092790 - L1MCa LINE L1 -4573 1991 1475 342 0 0 0 chr5 4537360 4537398 -195092752 + (TG)n Simple_repeat Simple_repeat 2 39 0 2315 244 47 31 chr5 4537398 4538091 -195092059 - L1MCa LINE L1 -5089 1475 37 22 35 0 0 chr5 4538226 4538255 -195091895 + AT_rich Low_complexity Low_complexity 1 29 0 318 275 43 72 chr5 4538606 4538744 -195091406 + MLT1H LTR MaLR 209 342 -207 423 243 0 10 chr5 4538959 4539062 -195091088 + FLAM_A SINE Alu 32 133 -9 1627 65 0 0 chr5 4539655 4539855 -195090295 + L1PA8 LINE L1 5967 6166 -6 262 336 30 8 chr5 4540658 4540792 -195089358 - MIR SINE MIR -86 176 40 1908 161 146 3 chr5 4541465 4541843 -195088307 - MSTB1 LTR MaLR 0 432 1 1792 35 4 18 chr5 4542344 4542571 -195087579 - L1PA4 LINE L1 0 6155 5932 1505 232 30 14 chr5 4542775 4543142 -195087008 + MLT1A2 LTR MaLR 2 374 0 182 380 43 0 chr5 4543720 4543812 -195086338 + L3 LINE CR1 894 989 -588 1387 224 48 3 chr5 4544455 4544790 -195085360 - MER89 LTR ERV1 -22 537 188 2423 53 0 3 chr5 4546981 4547331 -195082819 + AluY SINE Alu 1 349 0 22 56 0 0 chr5 4547378 4547414 -195082736 + AT_rich Low_complexity Low_complexity 1 36 0 1972 189 21 0 chr5 4549847 4550229 -195079921 + MLT1B LTR MaLR 1 390 0 189 303 0 0 chr5 4551464 4551609 -195078541 + (CA)n Simple_repeat Simple_repeat 1 145 0 2474 94 46 6 chr5 4552457 4552807 -195077343 - THE1B LTR MaLR 0 364 1 264 184 0 0 chr5 4554151 4554200 -195075950 + Charlie1 DNA MER1_type 2713 2761 0 306 257 49 28 chr5 4554275 4554419 -195075731 + GA-rich Low_complexity Low_complexity 2 148 0 211 257 40 0 chr5 4555096 4555170 -195074980 + GA-rich Low_complexity Low_complexity 5 81 0 1335 173 82 12 chr5 4555212 4555467 -195074683 + AluJo SINE Alu 16 288 -24 213 39 0 0 chr5 4555476 4555502 -195074648 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1525 206 41 32 chr5 4555590 4556032 -195074118 - Charlie1b DNA MER1_type -4 519 74 1154 262 29 29 chr5 4556253 4556593 -195073557 + MLT1A1 LTR MaLR 26 365 0 373 254 18 26 chr5 4557831 4557945 -195072205 + Charlie1b DNA MER1_type 88 200 -323 728 197 8 0 chr5 4559767 4559899 -195070251 - FLAM_C SINE Alu 0 133 1 2743 250 40 22 chr5 4560201 4561022 -195069128 - L1ME1 LINE L1 -6 6160 5325 4549 161 46 23 chr5 4561033 4561874 -195068276 - L1MC1 LINE L1 -23 6310 5450 246 242 62 62 chr5 4563215 4563343 -195066807 + MER39 LTR ERV1 6 133 -574 910 253 77 33 chr5 4563364 4563700 -195066450 + MER39 LTR ERV1 357 707 0 4169 164 18 78 chr5 4564982 4565941 -195064209 - L1MB3 LINE L1 -3 6180 5280 728 226 43 43 chr5 4567866 4568074 -195062076 + MER3 DNA MER1_type 1 208 -1 1242 271 32 42 chr5 4568128 4568626 -195061524 + MLT1D LTR MaLR 1 493 -12 2167 131 0 0 chr5 4568627 4568932 -195061218 + AluSx SINE Alu 1 305 -7 1477 165 32 21 chr5 4568953 4569232 -195060918 + AluJb SINE Alu 1 282 -30 25 51 0 0 chr5 4569234 4569273 -195060877 + AT_rich Low_complexity Low_complexity 1 39 0 279 326 54 0 chr5 4570111 4570203 -195059947 - L2 LINE L2 -3 3310 3214 290 247 112 8 chr5 4570263 4570385 -195059765 + MLT1H LTR MaLR 82 173 -376 347 202 0 0 chr5 4570537 4570608 -195059542 + MLT1G1 LTR MaLR 477 593 -2 239 143 0 0 chr5 4570876 4570918 -195059232 + L2 LINE L2 3271 3312 -1 275 216 122 101 chr5 4571276 4571415 -195058735 + MIR3 SINE MIR 5 146 -62 1416 210 63 30 chr5 4573168 4573530 -195056620 + MLT1A2 LTR MaLR 1 374 0 397 300 95 21 chr5 4574324 4574514 -195055636 + MIR SINE MIR 23 226 -36 1521 219 135 12 chr5 4574623 4575039 -195055111 + MLT1C LTR MaLR 1 467 0 330 167 0 0 chr5 4575327 4575387 -195054763 + (TA)n Simple_repeat Simple_repeat 1 60 0 2746 114 30 2 chr5 4575391 4575784 -195054366 - MLT2A1 LTR ERVL -40 404 1 301 229 0 128 chr5 4575784 4575893 -195054257 + L1MC3 LINE L1 6627 6721 -1064 814 206 0 14 chr5 4575894 4576035 -195054115 - FLAM_C SINE Alu -2 141 3 3447 240 60 24 chr5 4576036 4577061 -195053089 + L1MC3 LINE L1 6715 7775 -10 1710 285 98 60 chr5 4577072 4579838 -195050312 + L1MEc LINE L1 1069 3912 -2303 1831 303 60 11 chr5 4580495 4581481 -195048669 + L1MEc LINE L1 3881 4914 -1301 4822 188 11 26 chr5 4582157 4583631 -195046519 - L1MA6 LINE L1 0 6300 4850 1002 162 11 0 chr5 4583623 4583808 -195046342 + L1 LINE L1 3961 4147 -1999 * 180 97 0 0 chr5 4584437 4584468 -195045682 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr5 4586567 4586597 -195043553 + AT_rich Low_complexity Low_complexity 1 30 0 2188 99 17 0 chr5 4587261 4587553 -195042597 - AluSc SINE Alu -12 297 1 336 24 0 0 chr5 4588305 4588346 -195041804 + (CA)n Simple_repeat Simple_repeat 2 42 0 244 197 45 45 chr5 4589067 4589133 -195041017 + MIR SINE MIR 87 152 -110 1661 237 2 14 chr5 4589784 4590222 -195039928 - L1 LINE L1 -1034 5112 4680 25 0 0 0 chr5 4590250 4590275 -195039875 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 4590296 4590319 -195039831 + AT_rich Low_complexity Low_complexity 1 23 0 2334 98 22 182 chr5 4590494 4591033 -195039117 + MLT2A2 LTR ERVL 1 453 0 2177 108 17 0 chr5 4593160 4593456 -195036694 - AluSq SINE Alu -12 301 1 2048 106 4 7 chr5 4593500 4593774 -195036376 - AluSg SINE Alu -18 292 20 1758 166 3 7 chr5 4596309 4596620 -195033530 - AluSx SINE Alu 0 310 1 23 0 0 0 chr5 4599826 4599849 -195030301 + AT_rich Low_complexity Low_complexity 1 23 0 2071 141 0 3 chr5 4602767 4603066 -195027084 + AluSx SINE Alu 1 298 -14 219 339 147 16 chr5 4604116 4604429 -195025721 - L2 LINE L2 -2131 1183 830 339 298 32 8 chr5 4605831 4605955 -195024195 - MIR SINE MIR -19 243 117 240 261 39 78 chr5 4606683 4606836 -195023314 - L2 LINE L2 -528 2786 2640 362 337 0 23 chr5 4607017 4607369 -195022781 + (CA)n Simple_repeat Simple_repeat 1 343 0 311 312 13 26 chr5 4607381 4607535 -195022615 + (CA)n Simple_repeat Simple_repeat 1 152 0 298 346 12 12 chr5 4607578 4607740 -195022410 + (CA)n Simple_repeat Simple_repeat 1 162 0 228 319 42 56 chr5 4610116 4610260 -195019890 + L2 LINE L2 3163 3304 -9 1584 215 24 6 chr5 4611044 4611383 -195018767 + MLT2C1 LTR ERVL 5 349 -48 246 194 0 65 chr5 4611434 4611496 -195018654 + MLT2C1 LTR ERVL 463 520 0 317 345 0 35 chr5 4611767 4611912 -195018238 + L2 LINE L2 3165 3304 -9 389 211 21 18 chr5 4612871 4613212 -195016938 + (TAGA)n Simple_repeat Simple_repeat 1 342 0 901 126 11 0 chr5 4613256 4613431 -195016719 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 584 70 12 0 chr5 4613461 4613547 -195016603 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 1889 118 3 56 chr5 4614724 4615028 -195015122 - AluSx SINE Alu -20 292 5 411 153 0 48 chr5 4619107 4619296 -195010854 + (TA)n Simple_repeat Simple_repeat 1 180 0 286 105 0 0 chr5 4619296 4619334 -195010816 + (CA)n Simple_repeat Simple_repeat 1 38 0 2049 128 28 0 chr5 4620310 4620600 -195009550 + AluSq SINE Alu 1 298 -15 2685 113 8 8 chr5 4620898 4621262 -195008888 + THE1B LTR MaLR 1 364 0 180 275 203 48 chr5 4624662 4624869 -195005281 - L2 LINE L2 -20 3252 3014 1655 207 114 34 chr5 4625041 4625481 -195004669 - L1MB2 LINE L1 -2 6169 5695 696 239 0 0 chr5 4625519 4625649 -195004501 + FLAM_A SINE Alu 1 130 -3 287 327 138 11 chr5 4626136 4626396 -195003754 - MLT1J1 LTR MaLR -1 445 153 3800 180 46 18 chr5 4629720 4630502 -194999648 - Tigger3(Golem) DNA MER2_type 0 3029 2226 328 235 25 12 chr5 4630500 4630581 -194999569 - Tigger3(Golem) DNA MER2_type -2947 82 1 * 22 35 0 0 chr5 4631865 4631894 -194998256 + AT_rich Low_complexity Low_complexity 1 29 0 30 59 0 0 chr5 4633117 4633168 -194996982 + AT_rich Low_complexity Low_complexity 1 51 0 353 246 75 23 chr5 4633323 4633483 -194996667 - MLT1H LTR MaLR -2 593 421 21 36 0 0 chr5 4634750 4634778 -194995372 + AT_rich Low_complexity Low_complexity 1 28 0 281 282 69 46 chr5 4635067 4635241 -194994909 + L1M4 LINE L1 2444 2621 -3525 1658 159 24 24 chr5 4635310 4635629 -194994521 + AluJb SINE Alu 1 312 0 2213 126 129 26 chr5 4635906 4636294 -194993856 + MSTA LTR MaLR 1 428 0 418 171 0 27 chr5 4636729 4636840 -194993310 + (TCTA)n Simple_repeat Simple_repeat 2 109 0 2380 115 142 0 chr5 4637631 4638004 -194992146 + MSTA LTR MaLR 1 426 -2 260 242 11 77 chr5 4638058 4638149 -194992001 - MIR SINE MIR 0 262 178 302 345 92 6 chr5 4638460 4638634 -194991516 + MER5A DNA MER1_type 1 189 0 1545 113 54 14 chr5 4639253 4639474 -194990676 - MER30 DNA MER1_type 0 230 1 1037 193 11 0 chr5 4639846 4640033 -194990117 - Tigger3(Golem) DNA MER2_type -41 2988 2800 374 172 0 0 chr5 4640022 4640086 -194990064 - Tigger3(Golem) DNA MER2_type -2924 105 42 * 1045 240 183 48 chr5 4642935 4643373 -194986777 + MLT1D LTR MaLR 8 504 -1 1640 181 6 49 chr5 4645320 4645670 -194984480 + AluJb SINE Alu 1 312 0 229 346 15 31 chr5 4646098 4646228 -194983922 - L2 LINE L2 -5 3308 3181 264 345 29 12 chr5 4649926 4650097 -194980053 + ERVL LTR ERVL 461 634 -5130 340 361 43 29 chr5 4650287 4650567 -194979583 - LTR67 LTR ERVL -256 301 18 5833 72 1 0 chr5 4651929 4652652 -194977498 + HERVL LTR ERVL 3294 4017 -1637 27 0 0 0 chr5 4652663 4652690 -194977460 + AT_rich Low_complexity Low_complexity 1 27 0 205 128 43 0 chr5 4652795 4652842 -194977308 + CT-rich Low_complexity Low_complexity 2 50 0 23 0 0 0 chr5 4654365 4654388 -194975762 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 4655596 4655618 -194974532 + AT_rich Low_complexity Low_complexity 1 22 0 2720 200 43 23 chr5 4656313 4656919 -194973231 + L1MB8 LINE L1 5556 6173 -5 1934 167 6 13 chr5 4659450 4659848 -194970302 + AluSx SINE Alu 1 396 0 860 273 28 0 chr5 4659979 4660195 -194969955 - MER58A DNA MER1_type 0 224 3 206 327 0 0 chr5 4661703 4661755 -194968395 + L2 LINE L2 3195 3246 -67 23 0 0 0 chr5 4661896 4661919 -194968231 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr5 4661997 4662032 -194968118 + AT_rich Low_complexity Low_complexity 1 35 0 6131 107 53 6 chr5 4662347 4663247 -194966903 - L1PA10 LINE L1 -7 6161 5226 829 139 21 3 chr5 4663247 4663398 -194966752 + L1P LINE L1 3602 3750 -2396 356 266 186 0 chr5 4663746 4663870 -194966280 - LTR16C LTR ERVL -248 243 97 1957 142 44 0 chr5 4664028 4664323 -194965827 - AluY SINE Alu -3 308 1 23 0 0 0 chr5 4664582 4664605 -194965545 + AT_rich Low_complexity Low_complexity 1 23 0 257 296 57 0 chr5 4664642 4664801 -194965349 + L1MCc LINE L1 1369 1536 -4887 206 301 0 0 chr5 4664866 4664939 -194965211 - L2 LINE L2 0 3272 3200 210 191 0 0 chr5 4669588 4669630 -194960520 + T-rich Low_complexity Low_complexity 1 42 0 235 231 19 0 chr5 4670844 4670896 -194959254 + GA-rich Low_complexity Low_complexity 4 56 0 2128 82 11 4 chr5 4671071 4671373 -194958777 + AluY SINE Alu 1 304 0 21398 163 21 18 chr5 4672662 4675352 -194954798 + L1M1 LINE L1 12 2693 -4872 2472 170 26 5 chr5 4675352 4675769 -194954381 + MSTA LTR MaLR 1 426 -2 21398 163 21 18 chr5 4675769 4677067 -194953083 + L1M1 LINE L1 2693 4018 -3547 1286 142 5 5 chr5 4677067 4677285 -194952865 + L1MA2 LINE L1 6087 6304 0 21398 163 21 18 chr5 4677285 4677302 -194952848 + L1M1 LINE L1 4018 4033 -3532 2500 181 49 19 chr5 4677324 4677811 -194952339 + LTR26B LTR ERV1 30 531 0 2244 135 0 0 chr5 4679475 4679787 -194950363 + AluSx SINE Alu 1 312 0 5504 144 19 32 chr5 4680364 4681299 -194948851 + MER49 LTR ERV1 1 923 0 255 224 15 15 chr5 4681612 4681679 -194948471 + GA-rich Low_complexity Low_complexity 2 68 0 5515 162 12 17 chr5 4682378 4682736 -194947414 - L1PB1 LINE L1 0 6151 5793 311 18 71 0 chr5 4682736 4682792 -194947358 + (TA)n Simple_repeat Simple_repeat 2 61 0 5515 162 12 17 chr5 4682792 4684170 -194945980 - L1PB1 LINE L1 -358 5793 4427 * 5761 217 13 4 chr5 4684169 4685456 -194944694 + L1PB1 LINE L1 4516 5814 -1751 820 153 0 16 chr5 4686339 4686463 -194943687 - FLAM_C SINE Alu -11 122 1 24 0 0 0 chr5 4687039 4687063 -194943087 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 4687484 4687515 -194942635 + AT_rich Low_complexity Low_complexity 1 31 0 191 250 0 16 chr5 4687530 4687594 -194942556 + CT-rich Low_complexity Low_complexity 3 65 0 297 0 0 0 chr5 4688483 4688516 -194941634 + (TG)n Simple_repeat Simple_repeat 1 33 0 244 190 17 0 chr5 4688695 4688753 -194941397 + MER113 DNA MER1_type? 159 217 -304 1304 201 41 106 chr5 4689330 4689747 -194940403 + MLT1B LTR MaLR 1 390 0 342 290 38 30 chr5 4689790 4689921 -194940229 + L2 LINE L2 3182 3313 0 2152 196 27 7 chr5 4690772 4691186 -194938964 + MSTB LTR MaLR 1 422 -4 184 315 0 19 chr5 4694542 4694596 -194935554 + L2 LINE L2 3210 3262 -10 863 213 80 36 chr5 4697542 4697919 -194932231 - MLT1E1 LTR MaLR -2 591 174 1216 241 40 54 chr5 4697919 4698289 -194931861 - MLT1A1 LTR MaLR 0 365 1 863 213 80 36 chr5 4698289 4698360 -194931790 - MLT1E1 LTR MaLR -419 174 108 345 271 37 28 chr5 4698329 4698436 -194931714 - MLT1E LTR MaLR -427 166 59 * 426 313 56 0 chr5 4698720 4698918 -194931232 + LTR16C LTR ERVL 283 491 0 1502 183 54 0 chr5 4698978 4699220 -194930930 - MLT1C LTR MaLR -12 455 195 192 40 0 0 chr5 4699220 4699245 -194930905 + (TG)n Simple_repeat Simple_repeat 2 26 0 1502 183 54 0 chr5 4699245 4699281 -194930869 - MLT1C LTR MaLR -272 195 162 1137 167 15 0 chr5 4699349 4699553 -194930597 + L1MA4 LINE L1 6060 6266 -34 7650 246 61 45 chr5 4699555 4700307 -194929843 - L1 LINE L1 -1849 4501 3763 2031 125 3 0 chr5 4700307 4700603 -194929547 - AluY SINE Alu -4 307 11 7650 246 61 45 chr5 4700603 4702268 -194927882 - L1 LINE L1 -2587 3763 2127 2027 121 24 3 chr5 4702268 4702557 -194927593 - AluSx SINE Alu -17 295 1 7650 246 61 45 chr5 4702557 4703767 -194926383 - L1 LINE L1 -4223 2127 1053 1480 168 44 0 chr5 4703767 4704017 -194926133 + AluJb SINE Alu 43 303 -9 7650 246 61 45 chr5 4704017 4705084 -194925066 - L1 LINE L1 -5297 1053 5 211 209 45 0 chr5 4705193 4705260 -194924890 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 272 298 24 0 chr5 4705262 4705346 -194924804 + L1MEc LINE L1 118 203 -6193 331 359 18 12 chr5 4705385 4705552 -194924598 + L1MEc LINE L1 261 428 -5968 1090 278 35 12 chr5 4705718 4706056 -194924094 - L1MC/D LINE L1 -2208 5600 5255 284 309 36 47 chr5 4706170 4706448 -194923702 - L1MC/D LINE L1 -1115 5031 4757 2105 188 9 0 chr5 4706463 4706808 -194923342 - MER7A DNA MER2_type 0 346 1 507 311 117 30 chr5 4706974 4707575 -194922575 + L2 LINE L2 2662 3312 -1 489 296 5 7 chr5 4708046 4708509 -194921641 + (CA)n Simple_repeat Simple_repeat 1 461 0 254 292 6 0 chr5 4708567 4708728 -194921422 + (CA)n Simple_repeat Simple_repeat 1 162 0 186 189 0 0 chr5 4709256 4709293 -194920857 + (CAATA)n Simple_repeat Simple_repeat 2 38 0 1840 121 10 34 chr5 4711976 4712274 -194917876 - AluSx SINE Alu -21 291 1 238 330 154 0 chr5 4713387 4713478 -194916672 - MIR SINE MIR -88 120 16 461 351 20 15 chr5 4714122 4714324 -194915826 + MIR SINE MIR 48 250 -12 747 188 0 0 chr5 4714934 4715110 -194915040 + (TG)n Simple_repeat Simple_repeat 2 177 0 290 340 10 0 chr5 4715772 4715875 -194914275 + MIR SINE MIR 146 249 -13 200 33 0 33 chr5 4717194 4717224 -194912926 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1474 181 63 20 chr5 4717229 4717257 -194912893 - AluJb SINE Alu 0 312 287 1068 44 22 39 chr5 4717257 4717439 -194912711 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1474 181 63 20 chr5 4717439 4717709 -194912441 - AluJb SINE Alu -25 287 1 2659 52 9 0 chr5 4718267 4718597 -194911553 + L1PA7 LINE L1 5817 6149 -5 4492 104 14 1 chr5 4718639 4719295 -194910855 + L1PB2 LINE L1 5486 6149 -2 424 270 15 7 chr5 4720461 4720598 -194909552 + (CA)n Simple_repeat Simple_repeat 2 139 0 406 294 106 42 chr5 4721160 4721425 -194908725 + L3b LINE CR1 1184 1465 -118 391 227 23 0 chr5 4721598 4721686 -194908464 - L1ME1 LINE L1 -20 6146 6057 352 173 111 0 chr5 4722927 4723008 -194907142 - L1MC4 LINE L1 -1339 6703 6614 309 262 71 0 chr5 4723024 4723108 -194907042 - L1MC4 LINE L1 -1339 6703 6614 300 267 47 0 chr5 4723044 4723130 -194907020 + L1MC4 LINE L1 6614 6703 -1339 * 613 166 6 30 chr5 4723250 4723419 -194906731 + CT-rich Low_complexity Low_complexity 1 165 0 25 0 0 0 chr5 4724390 4724415 -194905735 + AT_rich Low_complexity Low_complexity 1 25 0 2124 110 4 0 chr5 4724679 4725003 -194905147 - AluSx SINE Alu 0 325 1 491 191 48 40 chr5 4726101 4726227 -194903923 + MER5A DNA MER1_type 3 129 -60 1699 194 39 31 chr5 4726290 4726677 -194903473 + MLT1B LTR MaLR 1 390 0 2304 106 6 3 chr5 4726764 4727075 -194903075 + AluSx SINE Alu 1 312 0 198 323 85 15 chr5 4727468 4727598 -194902552 - MIR SINE MIR -44 218 80 23 0 0 0 chr5 4727981 4728004 -194902146 + AT_rich Low_complexity Low_complexity 1 23 0 439 253 88 24 chr5 4729647 4729817 -194900333 - L3b LINE CR1 -123 1460 1280 530 100 17 133 chr5 4729840 4729960 -194900190 - AluSg/x SINE Alu -17 292 187 1820 103 0 9 chr5 4729960 4730193 -194899957 - AluSc SINE Alu -78 231 1 338 264 75 57 chr5 4732009 4732168 -194897982 - LTR16A1 LTR ERVL -30 427 266 991 224 69 114 chr5 4732524 4732992 -194897158 - MLT1D LTR MaLR -16 434 4 2104 120 0 3 chr5 4734211 4734545 -194895605 + AluSx SINE Alu 1 333 0 258 186 147 85 chr5 4735258 4735387 -194894763 - MLT1H LTR MaLR -28 521 385 896 219 47 9 chr5 4736023 4736256 -194893894 + MLT1C LTR MaLR 1 242 -225 217 286 37 62 chr5 4736460 4736548 -194893602 + MIR SINE MIR 70 154 -108 1584 229 87 18 chr5 4736548 4736985 -194893165 - MLT1C LTR MaLR 0 467 1 217 286 37 62 chr5 4736985 4737057 -194893093 + MIR SINE MIR 154 226 -36 1916 155 0 10 chr5 4739350 4739659 -194890491 - AluSx SINE Alu -4 308 3 798 187 48 17 chr5 4739717 4739987 -194890163 - MLT1B LTR MaLR 0 390 6 21 0 0 0 chr5 4740024 4740045 -194890105 + AT_rich Low_complexity Low_complexity 1 21 0 802 186 19 86 chr5 4740117 4740152 -194889998 + MER58A DNA MER1_type 29 65 -2355 2305 41 0 11 chr5 4740152 4740420 -194889730 - AluY SINE Alu -5 306 42 802 186 19 86 chr5 4740420 4740594 -194889556 + MER58A DNA MER1_type 65 224 0 896 196 121 46 chr5 4740599 4740880 -194889270 + MER33 DNA MER1_type 1 302 -22 1131 111 0 0 chr5 4741495 4741648 -194888502 + AluSq SINE Alu 153 305 -8 200 173 19 19 chr5 4741662 4741714 -194888436 + T-rich Low_complexity Low_complexity 2 53 0 231 353 7 0 chr5 4742458 4742594 -194887556 + (CA)n Simple_repeat Simple_repeat 1 137 0 1381 178 67 38 chr5 4742845 4743050 -194887100 - MER47A DNA MER2_type -1969 354 134 642 222 0 0 chr5 4743050 4743167 -194886983 + FLAM_C SINE Alu 1 117 -16 1381 178 67 38 chr5 4743167 4743304 -194886846 - MER47A DNA MER2_type -2189 134 2 300 316 89 41 chr5 4744460 4744922 -194885228 + L1MC/D LINE L1 5254 5737 -2071 357 291 96 25 chr5 4746361 4746560 -194883590 + MIR SINE MIR 32 244 -18 1552 209 3 0 chr5 4747442 4747900 -194882250 - AluJo SINE Alu 0 465 7 5730 123 22 2 chr5 4747917 4748792 -194881358 + L1PA13 LINE L1 5279 6160 -3 240 60 80 0 chr5 4749425 4749475 -194880675 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2106 94 7 0 chr5 4749476 4749752 -194880398 - AluSp SINE Alu -35 278 1 810 193 92 18 chr5 4750868 4751086 -194879064 + MER96B DNA MER1_type? 3 236 -181 247 179 30 15 chr5 4751255 4751322 -194878828 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 2726 211 58 53 chr5 4752936 4753816 -194876334 + L1ME2 LINE L1 5280 6163 -1 327 346 0 7 chr5 4754420 4754556 -194875594 - L2 LINE L2 0 3272 3138 2022 116 16 7 chr5 4755106 4755409 -194874741 - AluSc SINE Alu -1 308 3 1741 168 0 29 chr5 4757515 4757831 -194872319 - AluJb SINE Alu -5 307 1 398 304 7 15 chr5 4758625 4758760 -194871390 - MIR SINE MIR -55 153 20 184 276 161 0 chr5 4760361 4760448 -194869702 - MIR SINE MIR -131 131 31 276 204 0 0 chr5 4762137 4762191 -194867959 - L1PA11 LINE L1 -1028 5118 5065 5800 130 16 4 chr5 4762191 4763226 -194866924 + L1PA11 LINE L1 5129 6174 0 231 387 15 0 chr5 4763498 4763635 -194866515 + MIR SINE MIR 17 155 -107 501 198 0 0 chr5 4764316 4764417 -194865733 - AluJb SINE Alu 0 312 212 2197 118 0 3 chr5 4766068 4766364 -194863786 - AluSx SINE Alu -17 295 1 2228 174 46 16 chr5 4766512 4767013 -194863137 - L1MA9 LINE L1 -6 6306 5791 458 265 53 0 chr5 4766868 4767038 -194863112 - L1PA15 LINE L1 -227 5938 5760 459 246 49 0 chr5 4767164 4767286 -194862864 - MIR SINE MIR -71 191 64 353 125 0 0 chr5 4767327 4767383 -194862767 - U2 snRNA snRNA -128 60 5 5002 146 3 8 chr5 4767383 4768264 -194861886 + L1PA10 LINE L1 4088 4964 -1182 1934 133 47 9 chr5 4768267 4768606 -194861544 - THE1C LTR MaLR -23 352 1 6342 92 8 1 chr5 4768614 4769790 -194860360 + L1PA10 LINE L1 4966 6157 -11 2591 42 0 6 chr5 4771569 4771882 -194858268 + AluY SINE Alu 1 311 0 24 0 0 0 chr5 4774107 4774131 -194856019 + AT_rich Low_complexity Low_complexity 1 24 0 5080 19 3 0 chr5 4776317 4776906 -194853244 + L1PA3 LINE L1 5565 6155 0 34 24 0 0 chr5 4776910 4776951 -194853199 + AT_rich Low_complexity Low_complexity 1 41 0 2449 183 41 33 chr5 4777859 4778363 -194851787 + MLT2B3 LTR ERVL 2 512 -42 435 100 0 0 chr5 4778363 4778433 -194851717 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 2449 183 41 33 chr5 4778433 4778469 -194851681 + MLT2B3 LTR ERVL 512 546 -8 262 236 0 22 chr5 4778470 4778559 -194851591 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 753 209 0 37 chr5 4778586 4778749 -194851401 - MER2 DNA MER2_type -183 162 6 279 272 172 28 chr5 4779732 4779912 -194850238 + MLT1H LTR MaLR 79 284 -265 2055 111 50 10 chr5 4780346 4780644 -194849506 - AluSg SINE Alu 0 310 1 27 62 0 0 chr5 4780949 4780997 -194849153 + AT_rich Low_complexity Low_complexity 1 48 0 877 238 49 8 chr5 4781144 4781388 -194848762 + LTR53 LTR ERVL 1 254 -265 406 177 62 9 chr5 4781392 4781505 -194848645 + MLT1A1 LTR MaLR 5 123 -242 1138 216 0 4 chr5 4781705 4781950 -194848200 + MLT1A1 LTR MaLR 122 365 0 1028 203 103 0 chr5 4781953 4782195 -194847955 + LTR53 LTR ERVL 253 519 0 2385 104 0 0 chr5 4783022 4783331 -194846819 - AluSx SINE Alu -3 309 1 309 89 0 0 chr5 4783395 4783411 -194846739 + (CA)n Simple_repeat Simple_repeat 1 61 0 309 89 0 0 chr5 4783411 4783456 -194846694 + (CA)n Simple_repeat Simple_repeat 2 46 0 1145 279 91 66 chr5 4783482 4784579 -194845571 - L1MCc LINE L1 -4403 2719 1651 396 0 0 0 chr5 4784579 4784623 -194845527 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 1145 279 91 66 chr5 4784623 4785518 -194844632 - L1MCc LINE L1 -5471 1651 457 1147 289 63 20 chr5 4785807 4786364 -194843786 - L1MCc LINE L1 -5824 599 19 318 203 14 40 chr5 4786384 4786439 -194843711 + L2 LINE L2 3234 3288 -25 2437 76 0 25 chr5 4786439 4786754 -194843396 - AluY SINE Alu -4 307 1 318 203 14 40 chr5 4786754 4786772 -194843378 + L2 LINE L2 3288 3305 -8 214 200 0 0 chr5 4787487 4787527 -194842623 + T-rich Low_complexity Low_complexity 1 40 0 289 230 40 0 chr5 4789292 4789366 -194840784 + MER89 LTR ERV1 11 87 -472 * 1476 214 14 6 chr5 4789341 4789701 -194840449 + MER89 LTR ERV1 197 559 0 40 0 0 0 chr5 4791377 4791417 -194838733 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr5 4792411 4792435 -194837715 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 431 333 6 0 chr5 4793106 4793271 -194836879 - MER63B DNA MER1_type -270 166 1 2194 114 0 0 chr5 4793564 4793861 -194836289 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 4794402 4794423 -194835727 + AT_rich Low_complexity Low_complexity 1 21 0 452 84 0 14 chr5 4794480 4794551 -194835599 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 232 235 23 68 chr5 4794553 4794685 -194835465 + L1 LINE L1 3797 3922 -2224 586 306 108 54 chr5 4794714 4795289 -194834861 + L1ME3 LINE L1 3949 4554 -1592 590 292 70 46 chr5 4796213 4797249 -194832901 + L1ME3 LINE L1 4800 5858 -304 1816 205 30 5 chr5 4797267 4797671 -194832479 + MLT2C2 LTR ERVL 3 416 -48 1328 185 110 31 chr5 4797954 4798273 -194831877 + MER2 DNA MER2_type 1 344 0 1063 144 0 12 chr5 4798280 4798471 -194831679 - AluSg/x SINE Alu 0 312 134 2048 140 0 0 chr5 4798471 4798763 -194831387 - AluSg SINE Alu -17 293 2 538 264 42 14 chr5 4799065 4799209 -194830941 - MER5B DNA MER1_type -12 166 19 45 34 0 0 chr5 4800137 4800196 -194829954 + AT_rich Low_complexity Low_complexity 1 59 0 404 242 30 0 chr5 4802602 4802701 -194827449 + MIR SINE MIR 110 211 -51 1114 305 32 29 chr5 4802717 4803159 -194826991 - L2 LINE L2 -1045 2269 1827 1983 154 0 3 chr5 4803401 4803700 -194826450 + AluSx SINE Alu 1 298 -14 2679 225 72 115 chr5 4804128 4805543 -194824607 - MLT1A1-int LTR MaLR -13 1358 5 1326 227 16 40 chr5 4805547 4805921 -194824229 - MLT1A1 LTR MaLR 0 365 1 2107 218 67 19 chr5 4805941 4806439 -194823711 - MLT1E1 LTR MaLR -11 643 109 1778 201 41 41 chr5 4806439 4806906 -194823244 + MLT1C LTR MaLR 1 467 0 2107 218 67 19 chr5 4806906 4807021 -194823129 - MLT1E1 LTR MaLR -545 109 1 2486 119 11 0 chr5 4807151 4807522 -194822628 + THE1C LTR MaLR 1 375 0 358 240 16 8 chr5 4807554 4807647 -194822503 + MIR3 SINE MIR 105 199 -9 21 57 0 0 chr5 4808120 4808155 -194821995 + AT_rich Low_complexity Low_complexity 1 35 0 240 176 0 0 chr5 4808187 4808255 -194821895 + (TA)n Simple_repeat Simple_repeat 1 68 0 386 176 0 35 chr5 4809505 4809590 -194820560 - MER3 DNA MER1_type -2 207 126 957 161 57 0 chr5 4809593 4809804 -194820346 + L1MB3 LINE L1 5669 5891 -292 810 198 21 66 chr5 4809869 4810157 -194819993 - L1MA4 LINE L1 -1 6299 6025 195 267 35 69 chr5 4810341 4810457 -194819693 - MIR SINE MIR -116 146 35 28 0 0 0 chr5 4811691 4811719 -194818431 + AT_rich Low_complexity Low_complexity 1 28 0 3348 207 7 7 chr5 4811850 4812603 -194817547 - L1 LINE L1 -1884 4262 3510 4627 176 47 7 chr5 4812610 4813812 -194816338 + L1PA16 LINE L1 4900 6159 -7 2170 117 48 31 chr5 4815086 4815444 -194814706 - THE1B LTR MaLR 0 364 1 320 357 24 18 chr5 4815454 4815622 -194814528 + MIR SINE MIR 66 234 -28 243 290 117 51 chr5 4816118 4816332 -194813818 - L2 LINE L2 -812 2502 2275 23 33 0 0 chr5 5016679 5016709 -194613441 + AT_rich Low_complexity Low_complexity 1 30 0 189 107 0 0 chr5 5017369 5017397 -194612753 + (T)n Simple_repeat Simple_repeat 1 28 0 222 116 0 0 chr5 5020370 5020413 -194609737 + (T)n Simple_repeat Simple_repeat 1 43 0 769 258 114 54 chr5 5024995 5025561 -194604589 - MLT1F1 LTR MaLR -2 593 14 449 243 20 0 chr5 5025893 5026045 -194604105 - L1 LINE L1 -2793 3353 3199 5701 186 30 0 chr5 5026050 5027171 -194602979 + L1 LINE L1 3729 4883 -1263 1904 152 7 0 chr5 5028815 5029111 -194601039 + AluSx SINE Alu 1 298 -14 298 234 138 48 chr5 5029290 5029435 -194600715 + MLT1J2 LTR MaLR 291 448 -2 267 40 40 20 chr5 5031248 5031298 -194598852 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1260 120 0 6 chr5 5032035 5032258 -194597892 - AluSp SINE Alu 0 353 132 738 291 35 14 chr5 5032363 5032809 -194597341 + MLT1F1 LTR MaLR 14 558 -9 1500 197 112 0 chr5 5034744 5035049 -194595101 - MLT1A1 LTR MaLR -12 353 15 221 56 0 28 chr5 5036704 5036740 -194593410 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 3943 28 2 0 chr5 5036740 5037200 -194592950 - L1PA3 LINE L1 -24 6131 5671 3500 25 3 0 chr5 5037207 5037653 -194592497 + L1PA3 LINE L1 5225 5671 -484 299 298 6 17 chr5 5038226 5038404 -194591746 + (TA)n Simple_repeat Simple_repeat 2 177 0 246 246 15 15 chr5 5038531 5038596 -194591554 - L2 LINE L2 -97 3216 3152 869 211 6 0 chr5 5038601 5038772 -194591378 + MER2 DNA MER2_type 2 173 -172 564 284 79 41 chr5 5038924 5039241 -194590909 - L2 LINE L2 -167 3146 2818 214 296 49 12 chr5 5039241 5039322 -194590828 - L2 LINE L2 -629 2685 2602 242 261 35 61 chr5 5039647 5039762 -194590388 + MLT1J2 LTR MaLR 338 449 -1 2117 150 0 0 chr5 5040153 5040466 -194589684 - AluSq SINE Alu 0 313 1 1642 262 27 53 chr5 5041166 5041903 -194588247 - L1ME1 LINE L1 -8 6656 5939 369 123 18 0 chr5 5041906 5041963 -194588187 + MSTA LTR MaLR 1 58 -370 406 91 0 9 chr5 5041964 5042028 -194588122 - MLT2A1 LTR ERVL -2 442 388 307 196 0 0 chr5 5042044 5042100 -194588050 - L1MC4 LINE L1 -1339 6703 6648 2941 71 2 40 chr5 5042112 5042532 -194587618 - MLT2A1 LTR ERVL -40 404 1 2873 87 14 2 chr5 5042532 5042948 -194587202 - HERVL-A1-A1 LTR ERVL 0 5654 5234 33495 82 4 1 chr5 5043048 5047390 -194582760 - HERVL-A1-A1 LTR ERVL -1292 4362 5 3172 73 4 77 chr5 5047394 5047873 -194582277 - MLT2A1 LTR ERVL 0 444 1 2192 134 32 16 chr5 5047873 5048242 -194581908 + MSTA LTR MaLR 54 428 0 2379 259 97 24 chr5 5048242 5049395 -194580755 - L1ME1 LINE L1 -733 5943 4701 479 260 39 43 chr5 5049398 5049606 -194580544 - L1ME1 LINE L1 -4953 1693 1487 1499 281 102 31 chr5 5049615 5050203 -194579947 - L1ME1 LINE L1 -5639 903 274 1221 150 50 32 chr5 5050227 5050447 -194579703 - AluSg/x SINE Alu 0 312 89 481 281 121 0 chr5 5050460 5050659 -194579491 - L1ME1 LINE L1 -6306 236 14 30 59 0 0 chr5 5051215 5051266 -194578884 + AT_rich Low_complexity Low_complexity 1 51 0 247 243 14 27 chr5 5051590 5051664 -194578486 + CT-rich Low_complexity Low_complexity 2 74 0 222 338 13 13 chr5 5052885 5052962 -194577188 + L2 LINE L2 3172 3248 -24 1031 271 54 19 chr5 5053598 5054023 -194576127 - L1ME1 LINE L1 -7 6228 5789 4761 281 72 41 chr5 5054046 5054889 -194575261 - L1ME1 LINE L1 -743 5472 4656 2058 121 0 0 chr5 5054889 5055171 -194574979 - AluSq SINE Alu -11 302 21 4761 281 72 41 chr5 5055171 5058412 -194571738 - L1ME1 LINE L1 -1559 4656 1316 261 254 106 48 chr5 5058640 5059023 -194571127 - L1ME1 LINE L1 -5180 1060 670 1544 225 62 58 chr5 5059074 5059572 -194570578 - MLT1D LTR MaLR 0 505 6 355 385 95 22 chr5 5059577 5059935 -194570215 - L1ME1 LINE L1 -5785 611 228 456 136 0 0 chr5 5059987 5060053 -194570097 - AluS SINE Alu -244 66 1 198 0 0 0 chr5 5060485 5060507 -194569643 + (GA)n Simple_repeat Simple_repeat 1 22 0 340 248 0 9 chr5 5060520 5060629 -194569521 - L1ME LINE L1 -5079 991 884 1365 271 103 21 chr5 5060640 5061108 -194569042 + MLT2B1 LTR ERVL 1 506 -14 1465 306 72 8 chr5 5061170 5061924 -194568226 - L1ME LINE L1 -5242 828 27 1064 179 145 4 chr5 5062256 5062338 -194567812 - MLT1C LTR MaLR -173 294 225 240 35 0 0 chr5 5062338 5062367 -194567783 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 348 24 0 0 chr5 5062366 5062407 -194567743 + (TG)n Simple_repeat Simple_repeat 2 42 0 1064 179 145 4 chr5 5062367 5062558 -194567592 - MLT1C LTR MaLR -242 225 28 23 68 0 0 chr5 5062787 5062831 -194567319 + AT_rich Low_complexity Low_complexity 1 44 0 414 248 0 44 chr5 5062831 5062968 -194567182 + L1 LINE L1 2809 2939 -3207 218 222 0 16 chr5 5063926 5063989 -194566161 + (TA)n Simple_repeat Simple_repeat 2 63 0 2353 73 0 0 chr5 5064532 5064833 -194565317 - AluY SINE Alu -10 301 1 193 229 0 42 chr5 5065257 5065305 -194564845 + L2 LINE L2 3218 3263 -9 5561 220 53 45 chr5 5065921 5067551 -194562599 - L1MC3 LINE L1 -229 8054 6412 271 227 93 27 chr5 5067553 5067628 -194562522 - L1MC3 LINE L1 -2182 6101 6022 656 184 32 130 chr5 5067648 5067931 -194562219 - L1MC3 LINE L1 -816 5828 5843 2210 109 0 0 chr5 5067931 5068224 -194561926 - AluSx SINE Alu -17 295 3 656 184 32 130 chr5 5068224 5068345 -194561805 - L1MC3 LINE L1 -800 5844 5713 524 140 11 0 chr5 5068395 5068488 -194561662 + CT-rich Low_complexity Low_complexity 1 94 0 9225 190 32 25 chr5 5068526 5069599 -194560551 + L1M1 LINE L1 9 1072 -6493 2090 164 5 19 chr5 5069599 5069966 -194560184 + THE1B LTR MaLR 3 364 0 9225 190 32 25 chr5 5069966 5071798 -194558352 + L1M1 LINE L1 1072 3617 -3948 1929 111 26 15 chr5 5071956 5072297 -194557853 + L1MA3 LINE L1 3273 3617 -3948 207 100 0 0 chr5 5072341 5072402 -194557748 + (CA)n Simple_repeat Simple_repeat 1 91 0 207 100 0 0 chr5 5072402 5072432 -194557718 + (CA)n Simple_repeat Simple_repeat 1 30 0 1053 227 141 29 chr5 5072468 5072851 -194557299 + L1MA3 LINE L1 3628 4053 -3512 7463 111 9 0 chr5 5072851 5073946 -194556204 + THE1B-int LTR MaLR 476 1580 0 505 66 197 0 chr5 5073946 5074022 -194556128 + THE1B LTR MaLR 1 91 -273 235 211 0 35 chr5 5074043 5074100 -194556050 + THE1B-int LTR MaLR 1 55 -1596 2097 125 48 28 chr5 5074112 5074504 -194555646 + MSTA LTR MaLR 29 428 0 5590 166 15 22 chr5 5074504 5075929 -194554221 + L1MA3 LINE L1 5829 7240 -484 2354 97 3 0 chr5 5075929 5076229 -194553921 + AluSp SINE Alu 1 301 -12 5590 166 15 22 chr5 5076229 5076710 -194553440 + L1MA3 LINE L1 7240 7723 -1 411 269 0 14 chr5 5076756 5076901 -194553249 - L1MC3 LINE L1 -1114 5530 5388 310 216 85 45 chr5 5076918 5077094 -194553056 - L1MC3 LINE L1 -4413 2231 2049 467 31 10 188 chr5 5077137 5077177 -194552973 + MADE1 DNA Mariner 1 16 -64 2439 73 3 0 chr5 5077177 5077480 -194552670 - AluY SINE Alu -7 304 1 467 31 10 188 chr5 5077480 5077535 -194552615 + MADE1 DNA Mariner 16 79 -1 602 246 191 15 chr5 5077561 5077890 -194552260 - L1MC3 LINE L1 -4887 1759 1373 303 330 183 16 chr5 5077891 5078273 -194551877 - L1MC3 LINE L1 -5202 1344 899 278 295 9 9 chr5 5078351 5078456 -194551694 - L1MC3 LINE L1 -5668 874 770 396 296 24 19 chr5 5078928 5079134 -194551016 - L1MC3 LINE L1 -6320 222 16 553 234 0 7 chr5 5080369 5080523 -194549627 - L1MA10 LINE L1 -1 6333 6181 543 249 42 14 chr5 5080539 5080733 -194549417 + MLT1F1 LTR MaLR 388 565 -2 26 74 0 0 chr5 5080736 5080790 -194549360 + AT_rich Low_complexity Low_complexity 1 54 0 189 159 0 0 chr5 5082511 5082555 -194547595 + (TG)n Simple_repeat Simple_repeat 1 44 0 290 349 127 16 chr5 5083697 5083886 -194546264 + MIR SINE MIR 15 224 -38 188 381 0 0 chr5 5086174 5086271 -194543879 + L2 LINE L2 2397 2493 -821 553 117 53 12 chr5 5086851 5087022 -194543128 + (CA)n Simple_repeat Simple_repeat 1 178 0 449 86 43 0 chr5 5087102 5087195 -194542955 + (CA)n Simple_repeat Simple_repeat 2 98 0 24 0 0 0 chr5 5088137 5088161 -194541989 + AT_rich Low_complexity Low_complexity 1 24 0 1456 200 28 17 chr5 5088161 5088451 -194541699 - AluJo SINE Alu -19 293 1 201 94 0 0 chr5 5088490 5088522 -194541628 + (CA)n Simple_repeat Simple_repeat 1 32 0 231 36 0 0 chr5 5088811 5088839 -194541311 + (CA)n Simple_repeat Simple_repeat 2 29 0 26 64 0 0 chr5 5089264 5089311 -194540839 + AT_rich Low_complexity Low_complexity 1 47 0 225 247 23 132 chr5 5089829 5090003 -194540147 + MLT1H LTR MaLR 392 546 -3 364 391 31 9 chr5 5090647 5090872 -194539278 - MIR SINE MIR -17 245 16 192 125 0 0 chr5 5091300 5091332 -194538818 + (TG)n Simple_repeat Simple_repeat 1 32 0 2211 109 10 3 chr5 5092336 5092640 -194537510 - AluSc SINE Alu -3 306 1 2446 75 16 0 chr5 5093675 5093980 -194536170 - AluSg SINE Alu 0 310 1 561 232 91 17 chr5 5094334 5094542 -194535608 - MLT1C LTR MaLR -19 428 227 1831 172 0 26 chr5 5095335 5095643 -194534507 - AluSx SINE Alu -12 300 1 232 310 69 0 chr5 5096364 5096480 -194533670 + L2 LINE L2 3189 3312 -1 505 294 133 64 chr5 5096534 5096969 -194533181 - L2 LINE L2 -1 3312 2848 554 262 142 44 chr5 5097002 5097433 -194532717 + L2 LINE L2 2324 2796 -518 258 313 14 21 chr5 5097450 5097594 -194532556 - LTR33 LTR ERVL -2 519 377 33 25 0 0 chr5 5098257 5098297 -194531853 + AT_rich Low_complexity Low_complexity 1 40 0 275 143 0 18 chr5 5098324 5098380 -194531770 + (TG)n Simple_repeat Simple_repeat 1 55 0 1045 240 108 39 chr5 5098398 5098832 -194531318 - MLT2B1 LTR ERVL -54 466 3 21 0 0 0 chr5 5099156 5099177 -194530973 + AT_rich Low_complexity Low_complexity 1 21 0 1130 216 115 49 chr5 5099216 5099684 -194530466 + MLT1D LTR MaLR 7 505 0 432 266 147 39 chr5 5101136 5101422 -194528728 + L2 LINE L2 2027 2343 -971 383 305 107 27 chr5 5102805 5103067 -194527083 - L2 LINE L2 -11 3302 3020 210 91 0 0 chr5 5103099 5103132 -194527018 + (CA)n Simple_repeat Simple_repeat 2 34 0 374 309 0 5 chr5 5103147 5103361 -194526789 + (CA)n Simple_repeat Simple_repeat 1 212 0 459 356 0 0 chr5 5103375 5103555 -194526595 + (CA)n Simple_repeat Simple_repeat 1 180 0 2447 130 8 3 chr5 5103878 5104240 -194525910 + THE1B LTR MaLR 1 364 0 627 391 65 15 chr5 5104819 5105361 -194524789 + L3 LINE CR1 209 777 -800 65 35 0 0 chr5 5105845 5105931 -194524219 + AT_rich Low_complexity Low_complexity 1 86 0 23 0 0 0 chr5 5108266 5108289 -194521861 + AT_rich Low_complexity Low_complexity 1 23 0 689 209 0 0 chr5 5110652 5110800 -194519350 - L1MA3 LINE L1 0 6305 6158 816 155 128 59 chr5 5110804 5110960 -194519190 - MSTA LTR MaLR -228 200 56 1995 136 51 28 chr5 5110960 5111313 -194518837 + THE1B LTR MaLR 4 364 0 11443 105 3 5 chr5 5111313 5112896 -194517254 + THE1B-int LTR MaLR 1 1580 0 1917 140 68 31 chr5 5112896 5113247 -194516903 + THE1B LTR MaLR 1 364 0 816 155 128 59 chr5 5113247 5113275 -194516875 - MSTA LTR MaLR -371 57 1 3347 183 13 10 chr5 5113277 5113987 -194516163 - L1MA3 LINE L1 -145 6160 5449 2664 175 24 0 chr5 5113991 5114678 -194515472 + L1M1 LINE L1 4783 5489 -743 482 135 0 67 chr5 5114801 5114905 -194515245 - L1PB4 LINE L1 -8 6148 6052 1833 268 44 33 chr5 5114924 5115674 -194514476 - L1ME1 LINE L1 -4 6162 5405 22 0 0 0 chr5 5115927 5115949 -194514201 + AT_rich Low_complexity Low_complexity 1 22 0 195 69 0 0 chr5 5115972 5116001 -194514149 + (TATAA)n Simple_repeat Simple_repeat 2 30 0 4918 217 45 63 chr5 5116005 5117293 -194512857 + L1 LINE L1 3302 4551 -1595 826 86 0 0 chr5 5117293 5117409 -194512741 + L1PA13 LINE L1 6041 6156 -7 4918 217 45 63 chr5 5117409 5117909 -194512241 + L1 LINE L1 4551 5058 -1088 1840 264 28 10 chr5 5118250 5118856 -194511294 + L1MD3 LINE L1 7321 7937 -58 773 259 18 54 chr5 5118872 5119204 -194510946 - L1MA9 LINE L1 -40 6272 5953 776 268 20 0 chr5 5121673 5121923 -194508227 + L1MD3 LINE L1 7741 7995 0 277 301 87 0 chr5 5122422 5122525 -194507625 - L2 LINE L2 0 3272 3161 29 60 0 0 chr5 5124237 5124287 -194505863 + AT_rich Low_complexity Low_complexity 1 50 0 189 107 0 0 chr5 5124894 5124922 -194505228 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 21 36 0 0 chr5 5125803 5125831 -194504319 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 5127407 5127430 -194502720 + AT_rich Low_complexity Low_complexity 1 23 0 307 94 0 0 chr5 5129434 5129487 -194500663 + AluSc SINE Alu 247 299 0 265 335 98 56 chr5 5131243 5131724 -194498426 - L2 LINE L2 -3 3310 2810 561 228 35 7 chr5 5131901 5132046 -194498104 - Tigger7 DNA MER2_type 0 2587 2439 * 1646 186 39 6 chr5 5132041 5132374 -194497776 - Tigger7 DNA MER2_type -2143 344 1 669 323 26 9 chr5 5135758 5135990 -194494160 - MIR SINE MIR -18 244 9 738 236 33 19 chr5 5137766 5137978 -194492172 + MER20 DNA MER1_type 1 215 -4 855 108 8 0 chr5 5139227 5139356 -194490794 - L1PA7 LINE L1 -1 6153 6024 220 358 0 0 chr5 5139718 5139785 -194490365 + L2 LINE L2 2448 2514 -800 222 301 83 95 chr5 5140064 5140583 -194489567 - L2 LINE L2 -264 3049 2504 22 56 0 0 chr5 5143273 5143309 -194486841 + AT_rich Low_complexity Low_complexity 1 36 0 498 194 7 21 chr5 5143900 5144044 -194486106 + GA-rich Low_complexity Low_complexity 3 144 0 1778 185 13 3 chr5 5147099 5147521 -194482629 - AluJb SINE Alu 0 425 1 4736 91 48 14 chr5 5147563 5148276 -194481874 - L1PA11 LINE L1 -2 6172 5436 1152 220 81 55 chr5 5149515 5149790 -194480360 + MLT1C LTR MaLR 1 294 -173 2127 126 3 10 chr5 5149790 5150099 -194480051 + AluSq SINE Alu 5 311 -2 1152 220 81 55 chr5 5150099 5150278 -194479872 + MLT1C LTR MaLR 294 467 0 324 279 9 36 chr5 5152708 5152819 -194477331 + MIR SINE MIR 23 130 -132 481 268 118 52 chr5 5152851 5153232 -194476918 - LTR33A LTR ERVL 0 523 118 2691 92 16 3 chr5 5154382 5154752 -194475398 + THE1C LTR MaLR 1 375 0 414 129 5 4 chr5 5154782 5154992 -194475158 - AluSc SINE Alu -18 291 1 21 36 0 0 chr5 5155025 5155053 -194475097 + AT_rich Low_complexity Low_complexity 1 28 0 1282 137 11 157 chr5 5155054 5155411 -194474739 - L1MA4 LINE L1 -281 6019 5715 1998 153 3 0 chr5 5155437 5155737 -194474413 + AluSx SINE Alu 1 301 -11 302 271 126 13 chr5 5156381 5156532 -194473618 + MER58C DNA MER1_type 44 211 -4 302 260 30 40 chr5 5156615 5156715 -194473435 - L2 LINE L2 -6 3307 3209 501 291 77 52 chr5 5156748 5157150 -194473000 - MLT1H LTR MaLR 0 549 138 215 53 0 53 chr5 5159362 5159400 -194470750 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 747 326 94 32 chr5 5159905 5160160 -194469990 + L2 LINE L2 2445 2683 -630 360 0 0 0 chr5 5160160 5160200 -194469950 + (CA)n Simple_repeat Simple_repeat 2 41 0 747 326 94 32 chr5 5160200 5160754 -194469396 + L2 LINE L2 2683 3313 0 229 293 65 49 chr5 5160871 5160994 -194469156 + MIR SINE MIR 23 147 -61 929 230 102 59 chr5 5162803 5162865 -194467285 - MLT1C LTR MaLR -4 463 405 2707 75 0 0 chr5 5162865 5163213 -194466937 + L1PA7 LINE L1 5799 6146 -8 929 230 102 59 chr5 5163213 5163589 -194466561 - MLT1C LTR MaLR -62 405 6 268 301 81 97 chr5 5164157 5164343 -194465807 - MIR SINE MIR -12 250 68 21 0 0 0 chr5 5165315 5165336 -194464814 + AT_rich Low_complexity Low_complexity 1 21 0 1462 226 88 94 chr5 5166463 5167335 -194462815 + LTR28 LTR ERV1 1 1020 0 254 372 96 5 chr5 5167441 5167629 -194462521 + MIR SINE MIR 40 244 -18 188 357 161 0 chr5 5167975 5168087 -194462063 + L2 LINE L2 2931 3060 -253 1584 218 40 42 chr5 5168818 5169429 -194460721 + MLT1B-int LTR MaLR 1 726 -645 1304 264 59 25 chr5 5169769 5170174 -194459976 + MLT1B-int LTR MaLR 1317 1735 0 804 215 98 87 chr5 5170189 5170547 -194459603 + MLT1B LTR MaLR 13 374 -16 212 179 0 0 chr5 5171398 5171437 -194458713 + T-rich Low_complexity Low_complexity 1 39 0 1014 82 0 0 chr5 5171952 5172098 -194458052 + (CAT)n Simple_repeat Simple_repeat 3 148 0 743 215 145 8 chr5 5172470 5172712 -194457438 + L1ME1 LINE L1 5887 6161 -5 209 89 44 22 chr5 5174177 5174222 -194455928 + A-rich Low_complexity Low_complexity 2 47 0 1280 174 103 88 chr5 5174351 5174748 -194455402 + MER57A LTR ERV1 1 403 0 331 282 92 6 chr5 5176304 5176478 -194453672 + LTR16A LTR ERVL 161 349 -101 301 188 0 14 chr5 5176498 5176567 -194453583 - MLT2B1 LTR ERVL -47 367 300 198 0 0 0 chr5 5176595 5176617 -194453533 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 742 261 15 44 chr5 5176666 5176938 -194453212 - MLT2B1 LTR ERVL -255 265 2 681 231 11 0 chr5 5177275 5177461 -194452689 - MER53 DNA DNA -1 188 1 1407 229 54 9 chr5 5178723 5179072 -194451078 + MLT1A1 LTR MaLR 1 365 0 28 29 0 0 chr5 5179105 5179140 -194451010 + AT_rich Low_complexity Low_complexity 1 35 0 635 327 133 35 chr5 5179705 5180366 -194449784 - L2 LINE L2 -8 3305 2563 1972 129 7 0 chr5 5181148 5181451 -194448699 - AluSq SINE Alu 0 305 1 9307 199 22 20 chr5 5182500 5185876 -194444274 - L1MA6 LINE L1 -5 6295 2915 225 323 50 0 chr5 5188830 5188929 -194441221 + MIR SINE MIR 104 207 -55 1726 185 12 0 chr5 5188993 5189339 -194440811 - MLT1B LTR MaLR -40 350 1 281 285 123 37 chr5 5189490 5189865 -194440285 - L1ME4a LINE L1 -65 6056 5650 379 315 27 9 chr5 5189883 5189994 -194440156 + L2 LINE L2 3160 3272 0 1131 178 102 6 chr5 5191965 5192284 -194437866 - MER47B DNA MER2_type 0 418 1 262 361 31 0 chr5 5193142 5193239 -194436911 - MIR SINE MIR -73 135 36 249 299 11 35 chr5 5193908 5193995 -194436155 - MER5B DNA MER1_type -73 105 21 211 313 16 16 chr5 5193938 5194002 -194436148 + MER5A DNA MER1_type 113 176 -13 * 597 219 55 7 chr5 5195294 5195440 -194434710 - MER5A DNA MER1_type -34 155 3 295 160 0 0 chr5 5196336 5196386 -194433764 + MER5A DNA MER1_type 3 52 -137 36 23 0 0 chr5 5196743 5196786 -194433364 + AT_rich Low_complexity Low_complexity 1 43 0 260 311 53 62 chr5 5201911 5202233 -194427917 - L1MEd LINE L1 -5483 636 318 499 168 40 12 chr5 5202704 5202877 -194427273 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 21 36 0 0 chr5 5204222 5204250 -194425900 + AT_rich Low_complexity Low_complexity 1 28 0 611 62 0 0 chr5 5204445 5204525 -194425625 + MADE1 DNA Mariner 1 80 0 526 261 109 32 chr5 5205181 5205584 -194424566 + MLT1J LTR MaLR 1 511 0 343 329 57 14 chr5 5206332 5206472 -194423678 - L2 LINE L2 -1 3312 3167 308 298 56 76 chr5 5207157 5207355 -194422795 - L1ME2 LINE L1 -23 6141 5948 1324 246 39 48 chr5 5207407 5208114 -194422036 - L1ME3A LINE L1 -298 5864 5153 3188 3 0 6 chr5 5208130 5208492 -194421658 - L1PA2 LINE L1 0 6155 5796 390 21 0 0 chr5 5210861 5210908 -194419242 + (CA)n Simple_repeat Simple_repeat 2 48 0 1371 217 37 80 chr5 5214824 5215312 -194414838 - MLT1C LTR MaLR 0 467 1 306 0 0 0 chr5 5215562 5215596 -194414554 + (TG)n Simple_repeat Simple_repeat 1 34 0 1763 103 91 0 chr5 5216074 5216337 -194413813 + AluSx SINE Alu 1 287 -25 472 239 45 30 chr5 5217271 5217405 -194412745 - L2 LINE L2 0 3313 3178 2064 134 0 13 chr5 5217742 5218056 -194412094 - AluSg SINE Alu 0 310 1 181 365 21 21 chr5 5218334 5218430 -194411720 + L2 LINE L2 2589 2684 -630 2811 60 0 0 chr5 5218510 5218863 -194411287 - L1PA8 LINE L1 -3 6169 5817 2505 60 0 19 chr5 5219360 5219675 -194410475 + AluY SINE Alu 1 309 -2 235 102 20 20 chr5 5220866 5220915 -194409235 + (TA)n Simple_repeat Simple_repeat 1 49 0 325 146 8 49 chr5 5220974 5221097 -194409053 + (TA)n Simple_repeat Simple_repeat 1 118 0 396 201 0 50 chr5 5221151 5221330 -194408820 + (TA)n Simple_repeat Simple_repeat 1 170 0 468 172 0 59 chr5 5221354 5221823 -194408327 + (TA)n Simple_repeat Simple_repeat 1 441 0 1591 172 58 3 chr5 5222564 5222855 -194407295 + AluJo SINE Alu 2 308 -4 323 333 32 0 chr5 5223914 5224040 -194406110 + (TATG)n Simple_repeat Simple_repeat 2 131 0 520 250 11 0 chr5 5224042 5224218 -194405932 + (TA)n Simple_repeat Simple_repeat 1 178 0 702 344 4 0 chr5 5224242 5224472 -194405678 - MIR SINE MIR -12 250 20 982 206 54 10 chr5 5224480 5224684 -194405466 - MER20 DNA MER1_type 0 219 7 234 270 119 16 chr5 5224736 5224862 -194405288 - L1ME4a LINE L1 -31 6090 5952 1499 203 3 14 chr5 5224923 5225241 -194404909 - AluJo SINE Alu 0 312 1 21 82 0 0 chr5 5225390 5225439 -194404711 + AT_rich Low_complexity Low_complexity 1 49 0 818 169 19 20 chr5 5225843 5226110 -194404040 + AluJ SINE Alu 7 306 -6 24 32 0 0 chr5 5226149 5226180 -194403970 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr5 5226273 5226302 -194403848 + (TG)n Simple_repeat Simple_repeat 2 30 0 252 59 0 0 chr5 5227198 5227232 -194402918 + (TG)n Simple_repeat Simple_repeat 2 35 0 2595 173 12 12 chr5 5228010 5228276 -194401874 - MSTA LTR MaLR 0 428 160 2440 34 40 7 chr5 5228276 5228574 -194401576 + AluY SINE Alu 1 308 -3 2595 173 12 12 chr5 5228574 5228734 -194401416 - MSTA LTR MaLR -267 161 2 709 250 10 39 chr5 5229443 5229651 -194400499 + MER20 DNA MER1_type 14 215 -4 1913 125 16 13 chr5 5230134 5230439 -194399711 - AluSx SINE Alu -6 306 1 2290 100 0 13 chr5 5230900 5231211 -194398939 + AluSx SINE Alu 1 307 -5 445 331 0 0 chr5 5231473 5231603 -194398547 + GA-rich Low_complexity Low_complexity 2 131 0 207 286 48 36 chr5 5231806 5231890 -194398260 - L2 LINE L2 -20 3252 3168 423 0 0 0 chr5 5232329 5232376 -194397774 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 33 0 0 chr5 5233806 5233836 -194396314 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 5234253 5234283 -194395867 + AT_rich Low_complexity Low_complexity 1 30 0 1685 309 68 25 chr5 5234290 5234660 -194395490 + L1MEc LINE L1 297 650 -5746 2209 110 3 10 chr5 5234660 5234968 -194395182 + AluSq SINE Alu 3 308 -5 1685 309 68 25 chr5 5234968 5235605 -194394545 + L1MEc LINE L1 650 1347 -5049 401 285 27 37 chr5 5235767 5235991 -194394159 - L1MCa LINE L1 -894 1893 1511 586 293 86 80 chr5 5236041 5236427 -194393723 + MLT1F1 LTR MaLR 3 390 -152 4880 115 1 0 chr5 5236429 5237090 -194393060 + THE1A-int LTR MaLR 919 1580 0 2557 113 6 8 chr5 5237090 5237444 -194392706 + THE1A LTR MaLR 1 353 -2 420 281 114 33 chr5 5237685 5237895 -194392255 + MIR SINE MIR 6 232 -30 187 356 20 20 chr5 5238309 5238410 -194391740 + MIR3 SINE MIR 65 165 -43 2364 157 3 3 chr5 5238419 5238783 -194391367 + THE1B LTR MaLR 1 364 0 931 276 85 34 chr5 5239977 5240329 -194389821 - MLT1A2 LTR MaLR -4 370 1 22 0 0 0 chr5 5240687 5240709 -194389441 + AT_rich Low_complexity Low_complexity 1 22 0 2352 110 0 0 chr5 5241374 5241684 -194388466 - AluSx SINE Alu -2 310 1 226 228 98 43 chr5 5242091 5242183 -194387967 + MIR SINE MIR 94 190 -72 264 300 31 31 chr5 5244429 5244559 -194385591 - MER5A DNA MER1_type -6 183 54 27 29 0 0 chr5 5244680 5244714 -194385436 + AT_rich Low_complexity Low_complexity 1 34 0 210 37 0 0 chr5 5245760 5245787 -194384363 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 182 58 0 chr5 5245791 5245945 -194384205 + (TA)n Simple_repeat Simple_repeat 2 164 0 1680 175 77 72 chr5 5246111 5246499 -194383651 - MLT1B LTR MaLR 0 390 1 200 91 0 30 chr5 5247652 5247685 -194382465 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 2069 144 7 0 chr5 5248308 5248640 -194381510 + AluSg SINE Alu 1 334 0 1683 175 0 0 chr5 5248640 5248914 -194381236 + MER7A DNA MER2_type 65 336 -10 608 214 27 86 chr5 5250094 5250314 -194379836 + MIR SINE MIR 32 238 -24 224 174 0 22 chr5 5250328 5250374 -194379776 + (TTA)n Simple_repeat Simple_repeat 1 45 0 2094 131 3 0 chr5 5251895 5252192 -194377958 + AluSq SINE Alu 1 298 -15 2265 85 0 33 chr5 5255685 5255990 -194374160 - AluY SINE Alu -16 295 1 1402 127 0 0 chr5 5256032 5256244 -194373906 + AluSg/x SINE Alu 98 309 -3 915 104 7 30 chr5 5256393 5256528 -194373622 - L1PB1 LINE L1 -4 6147 6016 2337 163 5 21 chr5 5257336 5257717 -194372433 - THE1C LTR MaLR 0 375 1 757 231 14 53 chr5 5258197 5258405 -194371745 - MER20 DNA MER1_type -18 201 2 719 262 99 26 chr5 5258433 5258666 -194371484 - MIR SINE MIR -16 246 1 686 311 101 15 chr5 5259066 5259646 -194370504 + L1MC4 LINE L1 6336 7062 -980 2182 128 0 10 chr5 5259730 5260043 -194370107 - AluSx SINE Alu -2 310 1 381 271 62 8 chr5 5260329 5260458 -194369692 + L1MC4a LINE L1 7275 7410 -398 334 243 7 30 chr5 5261812 5262118 -194368032 + GA-rich Low_complexity Low_complexity 1 298 0 29 47 0 0 chr5 5262458 5262501 -194367649 + AT_rich Low_complexity Low_complexity 1 43 0 1874 142 35 0 chr5 5264532 5264821 -194365329 + AluSq SINE Alu 1 299 -14 922 281 29 32 chr5 5265358 5265735 -194364415 + L1MC4a LINE L1 6542 6917 -891 3582 150 47 66 chr5 5266536 5267123 -194363027 - MER50 LTR ERV1 -23 711 139 1994 129 37 0 chr5 5267123 5267418 -194362732 - AluSx SINE Alu -6 306 1 3582 150 47 66 chr5 5267418 5267555 -194362595 - MER50 LTR ERV1 -595 139 1 3582 166 33 24 chr5 5267961 5268893 -194361257 + L1MA4 LINE L1 4647 5606 -694 1994 138 3 0 chr5 5268893 5269182 -194360968 + AluSp SINE Alu 2 291 -22 3582 166 33 24 chr5 5269182 5269523 -194360627 + L1MA4 LINE L1 5606 5943 -357 2188 128 0 0 chr5 5270359 5270656 -194359494 + AluSx SINE Alu 3 299 -13 1317 219 92 73 chr5 5270795 5271079 -194359071 + MER77 LTR ERV1 180 522 -155 1727 149 34 3 chr5 5271079 5271375 -194358775 - AluSx SINE Alu -3 309 5 1317 219 92 73 chr5 5271375 5271530 -194358620 + MER77 LTR ERV1 522 673 -4 1130 261 156 75 chr5 5271642 5272953 -194357197 - HAL1 LINE L1 -1 2506 1090 23 86 0 0 chr5 5272975 5273033 -194357117 + AT_rich Low_complexity Low_complexity 1 58 0 571 277 158 55 chr5 5273112 5273636 -194356514 - HAL1 LINE L1 -1433 1074 497 234 229 330 0 chr5 5273742 5273851 -194356299 - HAL1 LINE L1 -2341 166 22 192 77 0 0 chr5 5275004 5275030 -194355120 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 2480 60 13 3 chr5 5278830 5279130 -194351020 - AluY SINE Alu -8 303 1 631 132 88 0 chr5 5279527 5279641 -194350509 + MSTB LTR MaLR 1 124 -302 32 57 0 0 chr5 5283199 5283252 -194346898 + AT_rich Low_complexity Low_complexity 1 53 0 414 0 0 0 chr5 5283291 5283337 -194346813 + (TG)n Simple_repeat Simple_repeat 2 47 0 1894 169 0 0 chr5 5285193 5285489 -194344661 - AluSx SINE Alu -16 296 1 1654 236 97 39 chr5 5287118 5287257 -194342893 + MLT1F1 LTR MaLR 1 131 -436 1707 196 58 3 chr5 5287257 5287603 -194342547 + MLT1A1 LTR MaLR 1 365 0 1654 236 97 39 chr5 5287603 5287998 -194342152 + MLT1F1 LTR MaLR 131 566 -1 827 329 19 3 chr5 5288008 5288330 -194341820 + L1ME3A LINE L1 5655 5981 -189 743 263 56 5 chr5 5288399 5288612 -194341538 - MER58A DNA MER1_type 0 224 1 279 346 93 33 chr5 5289823 5290222 -194339928 + HsTC2 DNA Tc2 469 891 -1007 197 0 71 0 chr5 5291359 5291387 -194338763 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 22 35 0 0 chr5 5291714 5291743 -194338407 + AT_rich Low_complexity Low_complexity 1 29 0 677 149 11 33 chr5 5291769 5291950 -194338200 + GA-rich Low_complexity Low_complexity 2 178 0 330 93 13 53 chr5 5291950 5292025 -194338125 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 195 184 0 0 chr5 5293311 5293349 -194336801 + CT-rich Low_complexity Low_complexity 2 39 0 345 197 0 0 chr5 5293795 5293871 -194336279 + GA-rich Low_complexity Low_complexity 3 78 0 21 0 0 0 chr5 5295658 5295679 -194334471 + AT_rich Low_complexity Low_complexity 1 21 0 2924 194 28 36 chr5 5296287 5296450 -194333700 + L1MC3 LINE L1 7050 7213 -572 2150 91 13 39 chr5 5296450 5296758 -194333392 - AluY SINE Alu -11 300 1 2924 194 28 36 chr5 5296758 5297208 -194332942 + L1MC3 LINE L1 7213 7658 -127 791 146 0 6 chr5 5298416 5298580 -194331570 + (TG)n Simple_repeat Simple_repeat 2 164 0 249 33 0 0 chr5 5302020 5302050 -194328100 + (T)n Simple_repeat Simple_repeat 1 30 0 2463 53 0 7 chr5 5304685 5304987 -194325163 - AluY SINE Alu -11 300 1 315 0 0 0 chr5 5305503 5305538 -194324612 + (TG)n Simple_repeat Simple_repeat 2 36 0 278 267 0 0 chr5 5305662 5305722 -194324428 + MER63 DNA MER1_type 688 747 -313 229 188 21 0 chr5 5305725 5305773 -194324377 + MER63 DNA MER1_type 978 1026 -35 2624 199 25 12 chr5 5305967 5306455 -194323695 - MER21B LTR ERV1 -369 494 1 189 0 0 0 chr5 5307134 5307155 -194322995 + (CA)n Simple_repeat Simple_repeat 1 21 0 422 330 112 31 chr5 5358352 5358710 -194271440 + L2 LINE L2 231 617 -2697 1099 255 55 16 chr5 5358731 5359188 -194270962 + MLT2B1 LTR ERVL 3 534 -20 419 353 145 22 chr5 5359422 5359878 -194270272 + L2 LINE L2 451 962 -2352 21 104 0 0 chr5 5359906 5359983 -194270167 + AT_rich Low_complexity Low_complexity 1 77 0 324 337 58 5 chr5 5360046 5360251 -194269899 - L1MC4a LINE L1 -1750 6058 5843 1990 155 0 0 chr5 5360251 5360576 -194269574 + AluSx SINE Alu 1 325 0 3102 211 59 22 chr5 5360611 5361528 -194268622 - L1MB2 LINE L1 -45 6126 5174 1451 199 80 0 chr5 5361534 5361896 -194268254 - L1MD3 LINE L1 -173 7822 7432 40138 47 22 2 chr5 5361900 5367930 -194262220 - L1PA2 LINE L1 -4 6151 1 2082 234 63 9 chr5 5367926 5368597 -194261553 - L1MB2 LINE L1 -947 5199 4493 * 285 230 63 40 chr5 5368678 5368804 -194261346 - L1MC4a LINE L1 -2066 5742 5614 1126 71 7 7 chr5 5368856 5369011 -194261139 - L1PB1 LINE L1 -1 6150 5996 421 332 96 32 chr5 5369099 5369845 -194260305 - L1MC4a LINE L1 -946 5200 4377 275 338 37 19 chr5 5370129 5370452 -194259698 + L1M4 LINE L1 3733 4061 -2085 3181 254 65 31 chr5 5371910 5372454 -194257696 - L1M4 LINE L1 -1471 4675 4151 1070 260 109 60 chr5 5372454 5373051 -194257099 + MLT1E2 LTR MaLR 1 626 0 3181 254 65 31 chr5 5373051 5374359 -194255791 - L1M4 LINE L1 -1995 4151 2760 206 347 0 0 chr5 5375616 5375691 -194254459 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 209 30 61 0 chr5 5376728 5376761 -194253389 + (CAGA)n Simple_repeat Simple_repeat 1 35 0 306 0 0 0 chr5 5381873 5381907 -194248243 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 216 198 45 chr5 5381958 5382069 -194248081 - MIR SINE MIR -71 191 64 350 306 32 8 chr5 5382083 5382207 -194247943 + MIR SINE MIR 13 139 -123 186 191 0 0 chr5 5382358 5382400 -194247750 + CT-rich Low_complexity Low_complexity 2 43 0 401 145 13 0 chr5 5382436 5382512 -194247638 + CT-rich Low_complexity Low_complexity 3 79 0 186 133 0 0 chr5 5382689 5382719 -194247431 + (T)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr5 5383630 5383652 -194246498 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 5387068 5387089 -194243061 + AT_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr5 5387460 5387509 -194242641 + AT_rich Low_complexity Low_complexity 1 49 0 1292 177 0 57 chr5 5387662 5387910 -194242240 + AluSq SINE Alu 1 234 -79 254 299 52 31 chr5 5388152 5388249 -194241901 - L2 LINE L2 -15 3298 3200 275 244 13 13 chr5 5388513 5388591 -194241559 + MIR SINE MIR 156 233 -29 304 262 52 95 chr5 5388695 5389000 -194241150 - L2 LINE L2 -640 2674 2383 239 291 145 37 chr5 5389962 5390258 -194239892 - MLT1J1 LTR MaLR -41 405 78 22 35 0 0 chr5 5391158 5391187 -194238963 + AT_rich Low_complexity Low_complexity 1 29 0 2315 105 3 0 chr5 5391309 5391605 -194238545 + AluSp SINE Alu 1 297 -16 320 298 65 48 chr5 5391698 5392098 -194238052 + L1M4 LINE L1 4513 4919 -1227 2920 91 3 0 chr5 5392188 5392551 -194237599 + THE1B LTR MaLR 1 364 0 270 212 9 88 chr5 5392910 5393023 -194237127 + L1M LINE L1 5326 5429 -2379 197 265 59 15 chr5 5393089 5393157 -194236993 - L2 LINE L2 0 3313 3243 24 77 0 0 chr5 5393444 5393496 -194236654 + AT_rich Low_complexity Low_complexity 1 52 0 24 67 0 0 chr5 5395084 5395129 -194235021 + AT_rich Low_complexity Low_complexity 1 45 0 23 68 0 0 chr5 5396102 5396146 -194234004 + AT_rich Low_complexity Low_complexity 1 44 0 203 0 37 0 chr5 5397244 5397271 -194232879 + (TG)n Simple_repeat Simple_repeat 1 28 0 2143 159 85 10 chr5 5400087 5400477 -194229673 - MSTA LTR MaLR 0 428 10 1900 195 34 6 chr5 5400629 5400978 -194229172 + MLT1A1 LTR MaLR 7 365 0 1158 233 131 23 chr5 5401078 5401484 -194228666 + MLT1C LTR MaLR 1 446 -11 967 318 23 8 chr5 5401493 5401845 -194228305 + ERVL LTR ERVL 830 1186 -3810 866 259 63 22 chr5 5402202 5402519 -194227631 + ERVL LTR ERVL 1675 2004 -2992 446 291 58 39 chr5 5402548 5402754 -194227396 + LTR1B LTR ERV1 39 248 -578 570 249 65 6 chr5 5402793 5402962 -194227188 + LTR28 LTR ERV1 396 574 -446 229 242 20 141 chr5 5402974 5403123 -194227027 + LTR28 LTR ERV1 848 978 -42 1187 345 28 13 chr5 5403169 5403772 -194226378 + ERVL LTR ERVL 2029 2640 -3014 420 365 14 0 chr5 5403820 5403965 -194226185 + ERVL LTR ERVL 2713 2859 -2137 323 292 44 9 chr5 5404008 5404121 -194226029 + ERVL LTR ERVL 2937 3053 -1943 290 312 49 28 chr5 5404255 5404502 -194225648 + ERVL LTR ERVL 3288 3539 -2225 569 332 80 44 chr5 5404539 5405516 -194224634 + ERVL LTR ERVL 3275 4610 -1154 273 319 9 0 chr5 5406120 5406236 -194223914 + LTR16A LTR ERVL 256 372 -78 276 284 121 21 chr5 5406788 5406929 -194223221 - MIR SINE MIR -86 176 22 273 283 33 33 chr5 5412430 5412522 -194217628 + GA-rich Low_complexity Low_complexity 4 95 0 1342 234 62 9 chr5 5413308 5413645 -194216505 + MLT1A1 LTR MaLR 11 365 0 243 333 24 0 chr5 5414104 5414188 -194215962 - L2 LINE L2 -4 3309 3224 343 322 54 20 chr5 5414405 5414554 -194215596 - L2 LINE L2 -250 3063 2910 181 306 85 45 chr5 5415103 5415302 -194214848 - L2 LINE L2 -416 2898 2692 21 0 0 0 chr5 5415378 5415399 -194214751 + AT_rich Low_complexity Low_complexity 1 21 0 195 291 154 62 chr5 5415638 5416061 -194214089 - L2 LINE L2 -475 2839 2378 5336 177 23 11 chr5 5416165 5417390 -194212760 + L1MA4 LINE L1 5062 6300 0 1688 187 31 48 chr5 5417448 5417532 -194212618 + MER7A DNA MER2_type 2 86 -2952 1907 119 50 11 chr5 5417532 5417809 -194212341 - AluSx SINE Alu -24 288 1 1688 187 31 48 chr5 5417809 5418077 -194212073 + MER7A DNA MER2_type 86 346 0 479 237 26 103 chr5 5418444 5418676 -194211474 - MLT1I LTR MaLR 0 409 196 1915 77 0 104 chr5 5419114 5419441 -194210709 - L1P LINE L1 -921 5225 4933 26 30 0 0 chr5 5422231 5422264 -194207886 + AT_rich Low_complexity Low_complexity 1 33 0 341 266 28 9 chr5 5423930 5424039 -194206111 - L1MC4 LINE L1 -134 7908 7798 269 333 123 49 chr5 5424563 5424806 -194205344 + L2 LINE L2 3053 3313 0 356 360 114 24 chr5 5425241 5425979 -194204171 - L1M4 LINE L1 -2969 3177 2374 202 282 0 0 chr5 5426102 5426173 -194203977 + A-rich Low_complexity Low_complexity 1 71 0 186 143 0 0 chr5 5426205 5426240 -194203910 + (CA)n Simple_repeat Simple_repeat 2 36 0 1502 214 3 28 chr5 5426458 5426775 -194203375 + AluJb SINE Alu 1 309 -3 300 281 133 56 chr5 5427301 5427497 -194202653 + L1MC4a LINE L1 5783 5993 -1815 1793 186 0 0 chr5 5427621 5427901 -194202249 - AluJb SINE Alu -20 292 13 247 308 97 43 chr5 5428004 5428446 -194201704 + L1MC4a LINE L1 6219 6684 -1124 12176 207 48 15 chr5 5428564 5429303 -194200847 + L1M1 LINE L1 16 729 -6927 180 77 0 0 chr5 5429303 5429329 -194200821 + (TAA)n Simple_repeat Simple_repeat 2 27 0 12176 207 48 15 chr5 5429329 5433800 -194196350 + L1M1 LINE L1 729 6913 -743 369 221 59 22 chr5 5434082 5434218 -194195932 + L1MC4 LINE L1 7110 7250 -792 217 158 26 0 chr5 5435407 5435445 -194194705 + (TG)n Simple_repeat Simple_repeat 2 40 0 301 276 76 9 chr5 5436675 5436780 -194193370 - MIR3 SINE MIR -12 196 85 1129 260 123 20 chr5 5437536 5437586 -194192564 + L1MD3 LINE L1 6550 6593 -1265 273 29 0 0 chr5 5437586 5437620 -194192530 + (CA)n Simple_repeat Simple_repeat 1 34 0 1129 260 123 20 chr5 5437620 5438200 -194191950 + L1MD3 LINE L1 6593 7275 -583 481 227 47 0 chr5 5438204 5438332 -194191818 + MLT1F1 LTR MaLR 2 135 -432 21 0 0 0 chr5 5438861 5438882 -194191268 + AT_rich Low_complexity Low_complexity 1 21 0 2560 45 0 10 chr5 5439002 5439315 -194190835 - AluY SINE Alu -1 310 1 272 306 0 9 chr5 5439650 5439761 -194190389 + (CTA)n Simple_repeat Simple_repeat 1 110 0 519 155 0 0 chr5 5439766 5439869 -194190281 + (CCA)n Simple_repeat Simple_repeat 1 103 0 541 263 23 0 chr5 5439912 5440045 -194190105 + MER45A DNA AcHobo 3 138 -40 237 227 91 15 chr5 5440045 5440111 -194190039 - L1MCa LINE L1 -6330 96 26 194 0 0 37 chr5 5443147 5443174 -194186976 + (TTA)n Simple_repeat Simple_repeat 2 27 0 417 45 5 119 chr5 5444375 5444577 -194185573 + (TA)n Simple_repeat Simple_repeat 1 179 0 282 77 15 77 chr5 5444602 5444732 -194185418 + (TA)n Simple_repeat Simple_repeat 1 122 0 189 0 0 0 chr5 5446320 5446341 -194183809 + (CA)n Simple_repeat Simple_repeat 1 21 0 384 313 0 11 chr5 5446361 5446540 -194183610 + (CA)n Simple_repeat Simple_repeat 2 178 0 344 341 0 6 chr5 5446600 5446767 -194183383 + (CA)n Simple_repeat Simple_repeat 1 166 0 275 294 26 3 chr5 5447695 5447826 -194182324 - MIR SINE MIR -62 146 13 190 356 70 9 chr5 5447916 5448031 -194182119 - MIR3 SINE MIR -2 206 85 546 146 188 48 chr5 5449357 5449522 -194180628 - MER4A LTR ERV1 -1 464 277 2000 125 8 55 chr5 5449540 5450024 -194180126 - MER4A LTR ERV1 -241 423 1 1273 213 47 18 chr5 5450734 5451072 -194179078 + MLT2D LTR ERVL 7 354 -60 200 234 0 16 chr5 5451157 5451221 -194178929 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 264 130 0 0 chr5 5451234 5451280 -194178870 + (CA)n Simple_repeat Simple_repeat 1 46 0 1533 160 110 22 chr5 5451286 5451605 -194178545 + MER7A DNA MER2_type 1 345 -1 276 111 0 0 chr5 5451605 5451650 -194178500 + (TC)n Simple_repeat Simple_repeat 1 45 0 977 200 53 12 chr5 5452379 5452735 -194177415 + MLT2B3 LTR ERVL 183 554 0 384 260 60 7 chr5 5452815 5452965 -194177185 - MER106B DNA MER1_type -4 1055 898 288 67 22 0 chr5 5453732 5453777 -194176373 - MADE1 DNA Mariner -34 46 1 254 357 31 10 chr5 5455619 5455717 -194174433 - MIR SINE MIR -115 147 48 1388 175 0 0 chr5 5457220 5457437 -194172713 + AluSx SINE Alu 6 222 -90 486 0 0 0 chr5 5457443 5457497 -194172653 + (TAA)n Simple_repeat Simple_repeat 3 56 0 751 253 52 18 chr5 5457497 5457884 -194172266 - L1M4 LINE L1 -2840 4117 3718 2235 104 13 10 chr5 5458457 5458765 -194171385 + AluSx SINE Alu 1 309 -3 602 216 36 18 chr5 5458929 5459151 -194170999 + L1M4 LINE L1 2996 3221 -2925 2025 146 123 5 chr5 5459349 5459732 -194170418 - MSTA LTR MaLR 0 428 1 716 328 123 5 chr5 5459750 5460155 -194169995 - L1M4 LINE L1 -6071 788 336 1805 142 178 8 chr5 5460205 5460571 -194169579 + MSTA LTR MaLR 1 428 0 6009 163 21 42 chr5 5460573 5461783 -194168367 + MSTA-int LTR MaLR 3 1187 -393 1566 200 14 19 chr5 5462341 5462701 -194167449 - L1MD1 LINE L1 -3 6239 5882 2161 113 0 12 chr5 5462737 5463083 -194167067 + L1PB1 LINE L1 5438 5779 -372 554 41 14 0 chr5 5463084 5463157 -194166993 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 552 192 17 0 chr5 5463157 5463277 -194166873 - L1MD1 LINE L1 -45 6197 6076 408 20 0 0 chr5 5463285 5463334 -194166816 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 2089 128 48 0 chr5 5463334 5463669 -194166481 + L1PB1 LINE L1 5799 6149 -2 427 233 166 38 chr5 5463691 5464190 -194165960 + Charlie2 DNA MER1_type 2276 2838 -24 1235 219 26 89 chr5 5465424 5465514 -194164636 + MLT1B LTR MaLR 1 95 -295 2116 149 16 19 chr5 5465514 5465890 -194164260 + THE1C LTR MaLR 1 375 0 1235 219 26 89 chr5 5465890 5466215 -194163935 + MLT1B LTR MaLR 95 390 0 1715 189 0 0 chr5 5466960 5467251 -194162899 - AluJb SINE Alu -21 291 1 782 267 84 28 chr5 5468270 5468340 -194161810 - LTR52 LTR ERVL -3 418 353 444 51 0 0 chr5 5468340 5468399 -194161751 + (CA)n Simple_repeat Simple_repeat 2 60 0 782 267 84 28 chr5 5468399 5468721 -194161429 - LTR52 LTR ERVL -68 353 4 1469 233 20 7 chr5 5470457 5470860 -194159290 - L1MD1 LINE L1 0 6242 5835 895 198 28 75 chr5 5470863 5471222 -194158928 - L1MDa LINE L1 -4767 1773 1432 399 106 0 0 chr5 5471333 5471399 -194158751 + (TG)n Simple_repeat Simple_repeat 1 66 0 11736 186 2 0 chr5 5471697 5475129 -194155021 + L1PA14 LINE L1 2766 6160 -1 2371 72 0 0 chr5 5475768 5476059 -194154091 - AluY SINE Alu -20 291 1 378 306 69 43 chr5 5478697 5478929 -194151221 - MIR SINE MIR -16 246 9 1711 248 46 36 chr5 5479274 5479798 -194150352 - MER65B LTR ERV1 0 531 3 1834 233 80 19 chr5 5479924 5480400 -194149750 - MLT1D LTR MaLR 0 505 1 326 201 136 82 chr5 5480539 5480723 -194149427 + L1MB3 LINE L1 3580 3773 -2373 43662 31 25 1 chr5 5480771 5486779 -194143371 + L1PA2 LINE L1 3 6155 0 343 260 64 87 chr5 5486779 5486952 -194143198 + L1MB3 LINE L1 3842 4010 -2136 319 264 31 54 chr5 5486959 5487088 -194143062 + L1MB3 LINE L1 5308 5433 -2375 545 128 21 11 chr5 5487431 5487525 -194142625 + L1PA14 LINE L1 6066 6160 -1 333 358 65 20 chr5 5487760 5488101 -194142049 + L1M4 LINE L1 3965 4320 -1826 6348 175 56 58 chr5 5488153 5490321 -194139829 + L1M4c LINE L1 391 2656 -3726 805 225 110 23 chr5 5490335 5490553 -194139597 + L1MB3 LINE L1 5929 6165 -18 303 180 0 0 chr5 5490574 5490624 -194139526 - MLT1C LTR MaLR -59 408 359 789 249 100 33 chr5 5491069 5491398 -194138752 - MLT1C LTR MaLR -116 351 1 436 269 159 16 chr5 5491407 5491563 -194138587 - MIR SINE MIR -58 150 16 223 217 22 0 chr5 5493173 5493219 -194136931 + GA-rich Low_complexity Low_complexity 2 48 0 249 331 39 62 chr5 5494936 5495066 -194135084 - L2 LINE L2 -5 3308 3182 1130 281 19 11 chr5 5495316 5495683 -194134467 - MER63B DNA MER1_type -66 370 1 2609 29 0 16 chr5 5495841 5496157 -194133993 - AluY SINE Alu 0 311 1 2911 91 18 2 chr5 5497990 5498384 -194131766 - L1PA10 LINE L1 0 6168 5769 22 0 0 0 chr5 5500707 5500729 -194129421 + AT_rich Low_complexity Low_complexity 1 22 0 24 91 0 0 chr5 5501127 5501193 -194128957 + AT_rich Low_complexity Low_complexity 1 66 0 189 0 0 0 chr5 5503115 5503136 -194127014 + (A)n Simple_repeat Simple_repeat 1 21 0 225 65 0 0 chr5 5503172 5503203 -194126947 + (TC)n Simple_repeat Simple_repeat 2 32 0 255 31 0 0 chr5 5503203 5503235 -194126915 + (CA)n Simple_repeat Simple_repeat 1 32 0 469 160 30 8 chr5 5506780 5506911 -194123239 + (TA)n Simple_repeat Simple_repeat 2 135 0 2260 105 0 3 chr5 5507361 5507667 -194122483 + AluSg SINE Alu 1 305 -5 282 29 0 0 chr5 5507750 5507785 -194122365 + (TG)n Simple_repeat Simple_repeat 2 36 0 1530 149 65 68 chr5 5508498 5508853 -194121297 - MLT1A2 LTR MaLR -20 354 1 25 0 0 0 chr5 5508960 5508985 -194121165 + AT_rich Low_complexity Low_complexity 1 25 0 3004 127 7 7 chr5 5509927 5510361 -194119789 - MER57B LTR ERV1 0 434 1 436 174 51 14 chr5 5510982 5511120 -194119030 + CT-rich Low_complexity Low_complexity 4 146 0 1783 158 35 0 chr5 5511125 5511409 -194118741 - AluJb SINE Alu -8 304 11 209 77 51 0 chr5 5511703 5511742 -194118408 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 1049 250 28 0 chr5 5511830 5512082 -194118068 + L1ME3 LINE L1 5896 6154 -8 245 196 0 0 chr5 5512797 5512843 -194117307 - L2 LINE L2 -4 3309 3264 732 316 5 5 chr5 5513113 5513331 -194116819 - MIR SINE MIR -42 220 3 813 277 81 63 chr5 5513809 5514339 -194115811 + MLT1F1 LTR MaLR 18 559 -8 241 275 154 0 chr5 5514854 5514945 -194115205 - L2 LINE L2 -5 3308 3204 195 111 0 0 chr5 5514991 5515018 -194115132 - L2 LINE L2 -22 3250 3224 225 378 43 0 chr5 5515038 5515145 -194115005 - MIR SINE MIR -48 160 45 355 294 86 37 chr5 5516499 5516686 -194113464 + MIR SINE MIR 65 260 -2 1806 132 189 35 chr5 5517030 5517401 -194112749 + MSTA LTR MaLR 1 428 0 886 258 30 17 chr5 5517844 5518143 -194112007 - L1M4 LINE L1 -5309 1233 931 1533 175 62 31 chr5 5518982 5519336 -194110814 - MLT1A1 LTR MaLR 0 365 1 5941 116 19 2 chr5 5520372 5521253 -194108897 - THE1A-int LTR MaLR -684 896 1 2155 130 11 26 chr5 5521253 5521600 -194108550 - THE1A LTR MaLR 0 355 14 1343 185 181 0 chr5 5521774 5521881 -194108269 + AluSx SINE Alu 3 89 -213 396 0 0 0 chr5 5521881 5521925 -194108225 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1343 185 181 0 chr5 5521925 5522071 -194108079 + AluSx SINE Alu 89 302 0 1907 208 75 23 chr5 5522313 5522793 -194107357 - MLT1D LTR MaLR 0 505 1 318 329 106 29 chr5 5522958 5523308 -194106842 - L2 LINE L2 -341 2973 2597 1424 186 0 40 chr5 5523722 5524023 -194106127 + L1MA9 LINE L1 6024 6312 0 265 208 0 0 chr5 5527156 5527209 -194102941 - MIR SINE MIR -32 230 178 347 288 28 79 chr5 5529235 5529450 -194100700 - MIR SINE MIR -56 206 3 203 133 0 0 chr5 5530103 5530133 -194100017 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 14554 142 26 110 chr5 5580444 5583885 -194046265 + L1PA7 LINE L1 1 3152 -2994 735 107 9 0 chr5 5583918 5584030 -194046120 - L1P LINE L1 -1385 4761 4649 14978 101 3 0 chr5 5584030 5587033 -194043117 + L1PA7 LINE L1 3129 6141 -13 195 42 0 0 chr5 5587037 5587061 -194043089 + (TAA)n Simple_repeat Simple_repeat 2 25 0 180 318 53 53 chr5 5589401 5589533 -194040617 + L2 LINE L2 3159 3290 -23 2217 189 25 7 chr5 5589534 5589978 -194040172 - MER66A LTR ERV1 0 478 27 197 397 13 0 chr5 5591271 5591349 -194038801 - MIR SINE MIR -164 98 20 975 295 54 28 chr5 5591742 5592241 -194037909 + L2 LINE L2 2157 2668 -646 2525 127 6 0 chr5 5592287 5592649 -194037501 - THE1B LTR MaLR 0 364 1 219 402 0 0 chr5 5596136 5596228 -194033922 + MIR SINE MIR 99 190 -72 186 133 0 0 chr5 5597731 5597761 -194032389 + (CA)n Simple_repeat Simple_repeat 2 31 0 1960 184 123 2 chr5 5598670 5599099 -194031051 - L1MC3 LINE L1 -9 7776 7296 1049 257 56 51 chr5 5599105 5599558 -194030592 + MLT1C LTR MaLR 1 457 -10 1405 212 41 132 chr5 5599567 5600255 -194029895 - L1MC3 LINE L1 -486 7299 6675 247 267 56 11 chr5 5600258 5600348 -194029802 + MIR SINE MIR 66 159 -103 202 284 181 8 chr5 5601196 5601323 -194028827 + MIR SINE MIR 103 251 -11 248 295 93 23 chr5 5601470 5601599 -194028551 - MIR SINE MIR -17 245 108 1673 168 31 25 chr5 5602123 5602491 -194027659 + Charlie3 DNA MER1_type 1 2712 0 1631 228 35 68 chr5 5602506 5602577 -194027573 - MLT1C LTR MaLR 0 467 395 540 198 112 9 chr5 5602577 5602693 -194027457 + FLAM_A SINE Alu 5 132 -1 1631 228 35 68 chr5 5602693 5603104 -194027046 - MLT1C LTR MaLR -72 395 1 184 328 0 16 chr5 5604143 5604204 -194025946 - MIR SINE MIR -75 133 74 1468 248 85 25 chr5 5608875 5609310 -194020840 - MLT1F LTR MaLR 0 542 82 2472 64 0 0 chr5 5609825 5610121 -194020029 - AluY SINE Alu -15 296 1 237 196 0 0 chr5 5610709 5610760 -194019390 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 4083 158 20 4 chr5 5611965 5612672 -194017478 + L1PA16 LINE L1 5444 6161 -5 248 180 0 0 chr5 5613420 5613470 -194016680 - L1MA10 LINE L1 -3 6331 6282 1998 142 3 6 chr5 5613488 5613839 -194016311 + AluSq SINE Alu 1 350 0 9497 193 56 20 chr5 5613887 5616517 -194013633 - L1M1 LINE L1 -642 5658 2920 40 37 0 0 chr5 5616571 5616625 -194013525 + AT_rich Low_complexity Low_complexity 1 54 0 653 263 38 19 chr5 5616677 5616943 -194013207 - L1MEc LINE L1 -918 5297 5027 1255 202 27 12 chr5 5616990 5617247 -194012903 - MLT1B LTR MaLR 0 390 130 2099 283 49 33 chr5 5617265 5618272 -194011878 - L1MEc LINE L1 -1802 4413 3391 1388 130 5 0 chr5 5618388 5618588 -194011562 + AluSp SINE Alu 108 308 -5 1639 262 61 44 chr5 5619189 5619360 -194010790 - L1MEc LINE L1 -3666 2549 2382 2056 100 60 0 chr5 5619360 5619641 -194010509 + AluSq SINE Alu 1 298 -15 1639 262 61 44 chr5 5619641 5619702 -194010448 - L1MEc LINE L1 -3833 2382 2324 453 146 9 36 chr5 5619702 5619812 -194010338 - L1MA9 LINE L1 -4 6308 6202 1639 262 61 44 chr5 5619812 5620478 -194009672 - L1MEc LINE L1 -3891 2324 1670 840 105 0 0 chr5 5620530 5620644 -194009506 - THE1A LTR MaLR -241 114 1 2479 85 9 0 chr5 5620685 5621013 -194009137 - THE1A LTR MaLR -24 331 1 11241 100 12 2 chr5 5621013 5622097 -194008053 - THE1A-int LTR MaLR 0 1580 474 225 0 0 0 chr5 5622097 5622122 -194008028 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 11241 100 12 2 chr5 5622122 5622601 -194007549 - THE1A-int LTR MaLR -1106 474 1 2586 99 8 0 chr5 5622601 5622953 -194007197 - THE1A LTR MaLR 0 355 1 697 280 45 48 chr5 5623007 5623590 -194006560 - L1MEc LINE L1 -4816 1580 1000 1168 237 20 4 chr5 5623619 5624060 -194006090 - L1MC3 LINE L1 -47 8156 7623 568 207 67 0 chr5 5624090 5624240 -194005910 - L1MC3 LINE L1 -681 7522 7363 282 106 21 0 chr5 5624243 5624290 -194005860 + L1MA9 LINE L1 6264 6311 -1 263 143 0 100 chr5 5624313 5624383 -194005767 - L1MC3 LINE L1 -846 7357 7295 198 71 0 0 chr5 5624389 5624417 -194005733 + (TG)n Simple_repeat Simple_repeat 2 29 0 1461 221 98 51 chr5 5624428 5624895 -194005255 + MLT1D LTR MaLR 17 505 0 5452 227 65 16 chr5 5624896 5625299 -194004851 - L1MC3 LINE L1 -743 5821 5439 282 116 0 0 chr5 5625299 5625342 -194004808 + (TG)n Simple_repeat Simple_repeat 2 44 0 5452 227 65 16 chr5 5625342 5626220 -194003930 - L1MC3 LINE L1 -1125 5439 5829 201 74 0 0 chr5 5626220 5626247 -194003903 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 5452 227 65 16 chr5 5626247 5626885 -194003265 - L1MC3 LINE L1 -734 5830 5225 275 130 65 11 chr5 5626887 5626979 -194003171 + (TA)n Simple_repeat Simple_repeat 2 98 0 198 50 75 0 chr5 5627012 5627052 -194003098 + (TA)n Simple_repeat Simple_repeat 1 43 0 872 299 63 0 chr5 5627052 5627416 -194002734 - L1MC3 LINE L1 -2032 4532 4146 2174 279 63 21 chr5 5627429 5628594 -194001556 - L1MC3 LINE L1 -2619 3945 2732 1368 286 65 19 chr5 5628839 5629826 -194000324 - L1M4 LINE L1 -2801 3345 2314 939 259 128 34 chr5 5629912 5630294 -193999856 - L1MC3 LINE L1 -5616 429 12 792 281 79 76 chr5 5630321 5630902 -193999248 - L1MEc LINE L1 -5454 942 360 717 268 80 23 chr5 5630940 5631294 -193998856 - MER57A LTR ERV1 -14 411 69 986 339 37 55 chr5 5631343 5632008 -193998142 - MER57A-int LTR ERV1 -386 7151 6505 2137 112 3 7 chr5 5632008 5632304 -193997846 - AluSg SINE Alu -15 295 1 986 339 37 55 chr5 5632304 5632574 -193997576 - MER57A-int LTR ERV1 -1032 6505 6232 1053 236 14 82 chr5 5633046 5633450 -193996700 - MER57A-int LTR ERV1 -1357 6180 5830 390 196 33 22 chr5 5634108 5634200 -193995950 - Alu SINE Alu -7 293 201 1077 192 30 44 chr5 5634200 5634508 -193995642 - MER57A-int LTR ERV1 -1587 4744 4643 404 266 37 27 chr5 5634583 5634771 -193995379 - MER57A-int LTR ERV1 -2290 2646 2457 * 602 208 26 106 chr5 5634743 5634839 -193995311 - MER57A-int LTR ERV1 -2550 2573 2471 378 0 0 0 chr5 5634839 5634881 -193995269 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1853 168 0 0 chr5 5634885 5635159 -193994991 - AluSx SINE Alu -28 284 11 602 208 26 106 chr5 5635159 5635321 -193994829 - MER57A-int LTR ERV1 -2655 2468 2331 234 0 0 0 chr5 5635479 5635505 -193994645 + (TA)n Simple_repeat Simple_repeat 2 27 0 4474 41 3 3 chr5 5635641 5636183 -193993967 + L1PA4 LINE L1 3098 3642 -2504 6504 31 4 0 chr5 5636183 5636949 -193993201 + L1PA4 LINE L1 5383 6155 0 4474 41 3 3 chr5 5636949 5636973 -193993177 + L1PA4 LINE L1 3641 3664 -2482 893 224 110 24 chr5 5637003 5637386 -193992764 - MER57A-int LTR ERV1 -3481 1455 1040 378 258 45 15 chr5 5637442 5637574 -193992576 - MER57A-int LTR ERV1 -4510 426 291 850 246 97 8 chr5 5638437 5638685 -193991465 - MER57A LTR ERV1 -2 401 132 524 300 22 11 chr5 5638813 5638993 -193991157 - L1MEc LINE L1 -6055 341 160 414 0 0 0 chr5 5638993 5639039 -193991111 + (TG)n Simple_repeat Simple_repeat 1 46 0 1889 141 14 4 chr5 5639039 5639316 -193990834 - AluSq SINE Alu -33 280 1 1266 168 39 0 chr5 5639319 5639551 -193990599 - L1MB3 LINE L1 -279 5904 5664 196 214 0 24 chr5 5639571 5639613 -193990537 - MER5A DNA MER1_type -1 188 148 1033 154 0 6 chr5 5639613 5639788 -193990362 + L1P LINE L1 4586 4759 -1387 536 217 70 0 chr5 5639787 5639916 -193990234 - L1MEc LINE L1 -6223 173 36 * 1147 230 34 73 chr5 5640573 5640956 -193989194 + MLT1A2 LTR MaLR 1 368 -6 2484 129 6 3 chr5 5642705 5643068 -193987082 + THE1B LTR MaLR 1 364 0 7608 27 0 1 chr5 5643515 5644620 -193985530 + L1PA3 LINE L1 5073 6152 -3 390 271 100 29 chr5 5644642 5644812 -193985338 - L1ME1 LINE L1 -74 6092 5911 261 83 0 0 chr5 5644819 5644855 -193985295 + (A)n Simple_repeat Simple_repeat 1 36 0 498 212 10 0 chr5 5645661 5645760 -193984390 + MER94 DNA DNA 2 101 -33 2780 13 0 0 chr5 5647344 5647647 -193982503 - AluYa5 SINE Alu -8 303 1 23 0 0 0 chr5 5647862 5647885 -193982265 + AT_rich Low_complexity Low_complexity 1 23 0 1992 131 0 42 chr5 5650814 5650867 -193979283 - L1P4 LINE L1 -437 5731 5677 2457 65 7 10 chr5 5650867 5651176 -193978974 - AluY SINE Alu 0 311 4 1992 131 0 42 chr5 5651176 5651458 -193978692 - L1P4 LINE L1 -491 5677 5410 * 2305 127 50 21 chr5 5651455 5651664 -193978486 + L1PA13 LINE L1 5725 5927 -236 2366 75 0 3 chr5 5651664 5651956 -193978194 + AluY SINE Alu 12 302 -9 2305 127 50 21 chr5 5651956 5652170 -193977980 + L1PA13 LINE L1 5927 6160 -3 23 33 0 0 chr5 5652763 5652793 -193977357 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 5653660 5653681 -193976469 + AT_rich Low_complexity Low_complexity 1 21 0 1106 171 0 0 chr5 5654895 5655076 -193975074 - AluJb SINE Alu -3 309 129 6391 96 0 0 chr5 5655076 5656033 -193974117 - L1PA10 LINE L1 -9 6159 5200 251 277 30 0 chr5 5656338 5656439 -193973711 + ERVL LTR ERVL 3162 3265 -1731 1877 159 26 34 chr5 5656623 5657001 -193973149 - THE1C LTR MaLR 0 375 1 2108 145 34 8 chr5 5657130 5657481 -193972669 - THE1C LTR MaLR -15 360 1 783 337 52 30 chr5 5657538 5658096 -193972054 + ERVL LTR ERVL 4032 4640 -1053 1071 282 63 11 chr5 5658395 5659149 -193971001 + L1MC2 LINE L1 1230 2217 -4390 4093 49 8 0 chr5 5659154 5659668 -193970482 + L1PA5 LINE L1 5636 6153 -1 253 190 0 0 chr5 5659865 5659923 -193970227 + L1MC2 LINE L1 3135 3192 -3234 3026 147 18 110 chr5 5659942 5660686 -193969464 + L1MA7 LINE L1 5595 6269 -22 5374 238 61 51 chr5 5660696 5664080 -193966070 + L1MC2 LINE L1 3195 6612 -12 368 298 81 44 chr5 5664396 5664999 -193965151 + L1MEd LINE L1 708 1383 -4927 2332 66 0 3 chr5 5664999 5665286 -193964864 + AluY SINE Alu 21 306 -5 368 298 81 44 chr5 5665286 5665536 -193964614 + L1MEd LINE L1 1383 1622 -4688 754 285 64 13 chr5 5665545 5665938 -193964212 + L1M4 LINE L1 4178 4590 -1556 526 248 47 97 chr5 5666102 5666146 -193964004 - L1MC/D LINE L1 -461 5723 5678 2167 116 3 0 chr5 5666146 5666449 -193963701 + AluSx SINE Alu 3 306 -6 526 248 47 97 chr5 5666449 5666638 -193963512 - L1MC/D LINE L1 -506 5678 5508 236 269 2 30 chr5 5666665 5666771 -193963379 - L1MC/D LINE L1 -701 5420 5318 * 254 252 86 7 chr5 5666766 5666905 -193963245 - L1MC/D LINE L1 -1631 4515 4366 440 327 101 19 chr5 5667308 5667904 -193962246 - L1M4 LINE L1 -1309 4837 4193 434 288 70 77 chr5 5668806 5669224 -193960926 + MLT1J LTR MaLR 6 501 -10 292 324 89 11 chr5 5669334 5669513 -193960637 - HAL1b LINE L1 -909 439 247 1442 184 7 47 chr5 5670757 5671056 -193959094 - AluJb SINE Alu -25 287 1 974 217 46 11 chr5 5671141 5671422 -193958728 - MER45R DNA AcHobo 0 1581 1291 712 256 103 38 chr5 5671421 5671819 -193958331 - MER45B DNA AcHobo -616 424 3 * 215 226 170 0 chr5 5672192 5672245 -193957905 - L2 LINE L2 -25 3247 3186 1135 36 0 0 chr5 5672497 5672634 -193957516 + L1PA5 LINE L1 6018 6154 0 430 374 40 34 chr5 5672991 5673312 -193956838 - L2 LINE L2 -667 2647 2325 2075 137 42 28 chr5 5673588 5673947 -193956203 + THE1B LTR MaLR 1 364 0 186 375 0 0 chr5 5674304 5674368 -193955782 + L2 LINE L2 2911 2974 -298 328 298 89 0 chr5 5674907 5675031 -193955119 + L2 LINE L2 3179 3313 0 227 203 17 0 chr5 5675325 5675384 -193954766 + GA-rich Low_complexity Low_complexity 1 60 0 2270 60 0 0 chr5 5678187 5678468 -193951682 + L1PA7 LINE L1 5866 6146 -8 192 152 0 0 chr5 5678899 5678932 -193951218 + CT-rich Low_complexity Low_complexity 3 35 0 357 134 12 24 chr5 5678978 5679060 -193951090 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 27 0 0 0 chr5 5679741 5679768 -193950382 + AT_rich Low_complexity Low_complexity 1 27 0 532 286 93 35 chr5 5680199 5680793 -193949357 - L1MEc LINE L1 -4730 1666 1039 23 33 0 0 chr5 5680810 5680840 -193949310 + AT_rich Low_complexity Low_complexity 1 30 0 284 367 36 22 chr5 5681476 5681754 -193948396 - L1MEc LINE L1 -6081 315 34 26 50 0 0 chr5 5681985 5682025 -193948125 + AT_rich Low_complexity Low_complexity 1 40 0 32 86 0 0 chr5 5682366 5682447 -193947703 + AT_rich Low_complexity Low_complexity 1 81 0 582 114 0 0 chr5 5683600 5683688 -193946462 + (TA)n Simple_repeat Simple_repeat 1 88 0 6566 85 0 4 chr5 5683691 5684670 -193945480 - L1PA8 LINE L1 -17 6155 5179 4146 109 10 0 chr5 5684673 5685290 -193944860 + L1P LINE L1 3195 3817 -2329 2227 226 107 16 chr5 5685337 5686324 -193943826 - L1MC/D LINE L1 -743 5403 4362 1678 189 123 3 chr5 5686371 5686563 -193943587 + MSTA LTR MaLR 1 169 -259 309 26 0 0 chr5 5686563 5686601 -193943549 + (TC)n Simple_repeat Simple_repeat 2 39 0 1678 189 123 3 chr5 5686601 5686790 -193943360 + MSTA LTR MaLR 169 428 0 4179 118 53 16 chr5 5687161 5687856 -193942294 - L1PA13 LINE L1 0 6163 5443 247 323 39 23 chr5 5689067 5689197 -193940953 + L2 LINE L2 3141 3272 0 23 0 0 0 chr5 5689556 5689579 -193940571 + AT_rich Low_complexity Low_complexity 1 23 0 265 314 88 10 chr5 5689951 5690053 -193940097 - L2 LINE L2 -332 2981 2872 2319 223 25 28 chr5 5692090 5693009 -193937141 - L1MB8 LINE L1 0 6989 5902 2398 75 0 0 chr5 5693009 5693302 -193936848 - AluY SINE Alu -18 293 1 2319 223 25 28 chr5 5693302 5693516 -193936634 - L1MB8 LINE L1 -1087 5902 5689 1077 264 30 15 chr5 5693511 5693905 -193936245 - L1MB8 LINE L1 -1683 5274 4875 * 4040 212 37 25 chr5 5693909 5695459 -193934691 + L1MB3 LINE L1 4597 6171 -12 2141 264 75 48 chr5 5695483 5695990 -193934160 - L1MB8 LINE L1 -2074 4883 4391 576 106 0 141 chr5 5695990 5696132 -193934018 - L1MA8 LINE L1 -1 6290 6169 264 59 0 0 chr5 5696138 5696172 -193933978 + (TG)n Simple_repeat Simple_repeat 1 34 0 2141 264 75 48 chr5 5696172 5696950 -193933200 - L1MB8 LINE L1 -2570 4387 3556 829 259 48 48 chr5 5696958 5697267 -193932883 + MLT1C LTR MaLR 156 464 -3 2325 249 41 44 chr5 5697305 5698657 -193931493 - L1MB8 LINE L1 -4701 2258 914 21 0 0 0 chr5 5699751 5699772 -193930378 + AT_rich Low_complexity Low_complexity 1 21 0 349 324 55 14 chr5 5702262 5702407 -193927743 - MIR SINE MIR -109 153 3 234 191 0 0 chr5 5702419 5702466 -193927684 + CT-rich Low_complexity Low_complexity 3 49 0 237 266 0 0 chr5 5702804 5702898 -193927252 + (TG)n Simple_repeat Simple_repeat 2 95 0 391 184 10 10 chr5 5704260 5704358 -193925792 + GA-rich Low_complexity Low_complexity 4 101 0 24 32 0 0 chr5 5706287 5706318 -193923832 + AT_rich Low_complexity Low_complexity 1 31 0 593 304 104 36 chr5 5706622 5707093 -193923057 + MLT1K LTR MaLR 80 582 -6 340 264 47 0 chr5 5708285 5708391 -193921759 - L1ME LINE L1 -468 5653 5543 609 277 104 38 chr5 5708404 5708963 -193921187 - L1ME LINE L1 -813 5333 4885 6114 96 43 61 chr5 5709566 5710740 -193919410 + pTR5 LTR ERV1 741 2029 -409 367 213 11 0 chr5 5710740 5710834 -193919316 + LTR30 LTR ERV1 548 642 -80 1221 112 96 0 chr5 5710835 5711023 -193919127 + LTR12 LTR ERV1 377 582 -132 256 274 126 0 chr5 5711787 5711977 -193918173 + L1MEc LINE L1 2089 2302 -4094 2135 217 84 42 chr5 5712003 5712911 -193917239 + L1MEc LINE L1 2331 3276 -2939 2009 112 0 0 chr5 5712911 5713197 -193916953 - AluSq SINE Alu 0 311 26 790 163 7 14 chr5 5713645 5713786 -193916364 + FLAM_A SINE Alu 1 140 -2 375 243 43 64 chr5 5714601 5714741 -193915409 + MIR SINE MIR 17 153 -109 216 0 0 0 chr5 5714800 5714824 -193915326 + (CA)n Simple_repeat Simple_repeat 1 24 0 221 226 15 73 chr5 5715872 5716009 -193914141 + A-rich Low_complexity Low_complexity 2 130 0 21 0 0 0 chr5 5716538 5716559 -193913591 + AT_rich Low_complexity Low_complexity 1 21 0 1540 271 73 54 chr5 5716854 5717966 -193912184 - Charlie7 DNA MER1_type -168 2444 1312 508 237 16 37 chr5 5718471 5718661 -193911489 - Charlie7 DNA MER1_type -1846 766 581 328 224 152 8 chr5 5718961 5719086 -193911064 - Charlie7 DNA MER1_type -2421 191 49 2147 116 7 7 chr5 5719366 5719669 -193910481 + AluSx SINE Alu 2 304 -8 180 286 202 0 chr5 5721381 5721500 -193908650 - L2 LINE L2 -69 3244 3102 387 145 0 0 chr5 5722017 5722086 -193908064 + (ATG)n Simple_repeat Simple_repeat 2 70 0 1991 161 9 0 chr5 5722367 5722715 -193907435 - L1PA16 LINE L1 -5 6161 5811 2299 189 37 18 chr5 5722865 5723484 -193906666 - L1MA9 LINE L1 -472 5840 5207 4929 224 44 12 chr5 5723486 5723841 -193906309 + L1 LINE L1 3779 4121 -2025 258 32 0 0 chr5 5723841 5723872 -193906278 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4929 224 44 12 chr5 5723872 5723952 -193906198 + L1 LINE L1 4121 4197 -1949 258 105 0 0 chr5 5723952 5723990 -193906160 + (CA)n Simple_repeat Simple_repeat 1 38 0 4929 224 44 12 chr5 5723990 5724926 -193905224 + L1 LINE L1 4197 5195 -951 227 223 54 31 chr5 5725091 5725221 -193904929 - HAL1b LINE L1 -535 813 681 2668 243 76 57 chr5 5725376 5725683 -193904467 - L1MD2 LINE L1 -13 6346 6046 1775 158 45 24 chr5 5725683 5726013 -193904137 - MER1B DNA MER1_type 0 337 1 2668 243 76 57 chr5 5726013 5726955 -193903195 - L1MD2 LINE L1 -313 6046 5056 844 268 27 27 chr5 5726950 5727249 -193902901 - L1MD2 LINE L1 -1450 4696 4398 * 22 0 0 0 chr5 5728831 5728853 -193901297 + AT_rich Low_complexity Low_complexity 1 22 0 1282 260 100 91 chr5 5732500 5732627 -193897523 - MLT1E2 LTR MaLR -110 516 392 887 205 124 95 chr5 5732627 5733080 -193897070 - MER31B LTR ERV1 0 466 1 1282 260 100 91 chr5 5733080 5733460 -193896690 - MLT1E2 LTR MaLR -234 392 1 9270 239 84 22 chr5 5733493 5733714 -193896436 + L1MC3 LINE L1 2432 2638 -5147 2123 139 10 3 chr5 5733714 5734024 -193896126 - AluSx SINE Alu 0 312 1 9270 239 84 22 chr5 5734024 5738829 -193891321 + L1MC3 LINE L1 2638 7771 -14 2139 104 0 44 chr5 5738948 5739266 -193890884 + AluSx SINE Alu 1 304 -8 277 284 173 12 chr5 5739421 5739583 -193890567 - MIR SINE MIR -21 241 54 293 357 58 0 chr5 5741141 5741295 -193888855 - MIR SINE MIR -72 190 28 200 333 181 7 chr5 5742033 5742171 -193887979 - L2 LINE L2 0 3313 3152 295 294 0 0 chr5 5742665 5742733 -193887417 + polypurine Low_complexity Low_complexity 2 69 0 1386 143 31 5 chr5 5743488 5743711 -193886439 - MER30 DNA MER1_type 0 230 2 2067 127 3 19 chr5 5744722 5745030 -193885120 + AluSq SINE Alu 1 303 -10 429 292 9 0 chr5 5745815 5745928 -193884222 + MER81 DNA DNA 1 114 0 322 111 0 32 chr5 5746755 5746818 -193883332 + (GAAA)n Simple_repeat Simple_repeat 4 64 0 227 274 166 68 chr5 5746820 5747469 -193882681 + HAL1 LINE L1 880 1592 -915 393 203 119 17 chr5 5748024 5748142 -193882008 + L2 LINE L2 3180 3309 -4 341 295 96 76 chr5 5748170 5748641 -193881509 + HAL1 LINE L1 2007 2486 -21 1679 193 3 23 chr5 5748758 5749063 -193881087 - AluJo SINE Alu -13 299 1 2202 119 7 0 chr5 5750598 5750892 -193879258 + AluSx SINE Alu 1 296 -16 697 306 105 35 chr5 5750909 5751568 -193878582 + L1M4 LINE L1 2204 2908 -3238 213 250 0 0 chr5 5751991 5752051 -193878099 + (TA)n Simple_repeat Simple_repeat 2 61 0 228 136 0 0 chr5 5752052 5752096 -193878054 - LTR66 LTR ERVL -172 438 395 3074 165 29 8 chr5 5752135 5752723 -193877427 + L1MC1 LINE L1 5734 6333 0 1507 161 56 21 chr5 5753227 5753513 -193876637 - AluJb SINE Alu -16 296 1 527 250 12 54 chr5 5754036 5754092 -193876058 - MER45A DNA AcHobo -1420 161 104 2539 59 0 13 chr5 5754092 5754397 -193875753 + AluY SINE Alu 1 301 -10 527 250 12 54 chr5 5754397 5754508 -193875642 - MER45A DNA AcHobo -1477 104 1 236 254 0 0 chr5 5758677 5758744 -193871406 - MIR SINE MIR -64 144 78 3949 161 18 60 chr5 5758881 5759700 -193870450 + LTR1 LTR ERV1 1 785 0 261 0 0 0 chr5 5760728 5760757 -193869393 + (CA)n Simple_repeat Simple_repeat 1 29 0 2541 174 47 19 chr5 5761023 5761551 -193868599 + MER67A LTR ERV1 1 543 0 623 183 215 5 chr5 5762439 5762599 -193867551 + LTR28 LTR ERV1 1 139 -286 304 197 14 0 chr5 5762610 5762681 -193867469 + LTR1 LTR ERV1 119 190 -595 * 3075 179 129 16 chr5 5762650 5763287 -193866863 + LTR28 LTR ERV1 308 1016 -4 189 178 22 0 chr5 5763322 5763367 -193866783 - MIR SINE MIR -70 138 93 303 204 0 107 chr5 5764284 5764387 -193865763 + HsTC2 DNA Tc2 5 96 -1802 1266 179 31 0 chr5 5764744 5765001 -193865149 + L1MB3 LINE L1 5919 6183 0 1905 101 12 0 chr5 5765004 5765262 -193864888 + AluSc SINE Alu 36 296 -13 1623 180 11 7 chr5 5765314 5765598 -193864552 + AluJb SINE Alu 1 285 -27 2848 121 27 16 chr5 5766884 5767332 -193862818 + MER4C LTR ERV1 5 457 -8 261 139 0 0 chr5 5767901 5767944 -193862206 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 608 273 6 27 chr5 5768207 5768390 -193861760 - MER5A DNA MER1_type -4 185 7 1413 273 83 53 chr5 5768499 5769104 -193861046 + MER21B LTR ERV1 189 811 -52 269 170 21 85 chr5 5769202 5769296 -193860854 + (CATTG)n Simple_repeat Simple_repeat 1 88 0 619 277 15 29 chr5 5770403 5770598 -193859552 - MER20B DNA MER1_type -17 202 7 331 289 61 24 chr5 5770692 5770960 -193859190 + L1M4 LINE L1 2888 3163 -2983 269 245 60 119 chr5 5770999 5771150 -193859000 + LTR33A LTR ERVL 21 162 -361 310 200 0 15 chr5 5771389 5771454 -193858696 + LTR33A LTR ERVL 442 505 -18 252 235 0 0 chr5 5771453 5771504 -193858646 + LTR33A LTR ERVL 473 523 0 * 32 26 0 0 chr5 5771617 5771656 -193858494 + AT_rich Low_complexity Low_complexity 1 39 0 344 294 52 29 chr5 5771896 5772202 -193857948 + L1M4 LINE L1 3687 3999 -2147 239 293 0 0 chr5 5772210 5772285 -193857865 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 28 29 0 0 chr5 5772341 5772376 -193857774 + AT_rich Low_complexity Low_complexity 1 35 0 673 113 0 10 chr5 5773142 5773239 -193856911 + MER4A LTR ERV1 1 96 -568 2716 107 12 12 chr5 5773240 5773642 -193856508 + MER4A LTR ERV1 263 664 0 2409 51 24 0 chr5 5774599 5774891 -193855259 + AluY SINE Alu 1 299 -12 596 161 0 8 chr5 5774892 5775010 -193855140 - MER5A DNA MER1_type -54 135 19 360 0 0 0 chr5 5776010 5776050 -193854100 + (CA)n Simple_repeat Simple_repeat 1 40 0 2114 207 153 56 chr5 5776504 5777351 -193852799 + LTR1B LTR ERV1 1 826 0 437 220 164 95 chr5 5777619 5777851 -193852299 + MLT2B1 LTR ERVL 265 512 -8 288 318 48 16 chr5 5779510 5779699 -193850451 + L3 LINE CR1 753 947 -630 180 111 0 0 chr5 5780222 5780249 -193849901 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 23 0 0 0 chr5 5783669 5783692 -193846458 + AT_rich Low_complexity Low_complexity 1 23 0 355 131 0 0 chr5 5785002 5785063 -193845087 - L1MA4 LINE L1 -5 6295 6235 198 339 0 0 chr5 5785703 5785768 -193844382 + MIR3 SINE MIR 144 208 0 197 162 0 27 chr5 5787733 5787770 -193842380 - L2 LINE L2 -10 3303 3268 707 227 54 125 chr5 5788190 5788542 -193841608 - MER46C DNA MER2_type -5 333 7 295 317 49 28 chr5 5788636 5788778 -193841372 - MIR3 SINE MIR -28 180 36 276 279 60 117 chr5 5789315 5789648 -193840502 + L2 LINE L2 2958 3271 -1 317 95 0 0 chr5 5790027 5790069 -193840081 + L2 LINE L2 3261 3302 -11 194 293 0 52 chr5 5790326 5790384 -193839766 - L3 LINE CR1 -123 1454 1400 2169 139 0 3 chr5 5791861 5792163 -193837987 - AluSc SINE Alu -8 301 1 4732 112 4 8 chr5 5792707 5793420 -193836730 + L1PA13 LINE L1 5452 6161 -2 2326 97 3 0 chr5 5793850 5794150 -193836000 + AluSx SINE Alu 1 301 -11 973 259 79 36 chr5 5796098 5796708 -193833442 - L1MC5 LINE L1 -36 7925 7290 451 281 6 11 chr5 5796842 5797020 -193833130 - L1MC5 LINE L1 -733 7228 7052 244 211 33 22 chr5 5797086 5797176 -193832974 - L1MC4 LINE L1 -1098 6944 6854 3796 77 10 27 chr5 5797186 5797420 -193832730 - LTR10C LTR ERV1 -37 596 360 2829 13 0 0 chr5 5797420 5797733 -193832417 - AluYb8 SINE Alu -5 313 1 3796 77 10 27 chr5 5797733 5798079 -193832071 - LTR10C LTR ERV1 -273 360 1 282 233 26 86 chr5 5798087 5798203 -193831947 - L1MC5 LINE L1 -1191 6770 6662 23 33 0 0 chr5 5798229 5798259 -193831891 + AT_rich Low_complexity Low_complexity 1 30 0 672 250 75 4 chr5 5798714 5798942 -193831208 - L1MC5 LINE L1 -1866 5942 5699 337 115 0 0 chr5 5798950 5799002 -193831148 - MADE1 DNA Mariner 0 80 29 315 0 0 0 chr5 5799201 5799236 -193830914 + (CA)n Simple_repeat Simple_repeat 2 36 0 214 290 105 9 chr5 5799513 5799745 -193830405 + MIR3 SINE MIR 4 256 -6 2388 111 6 6 chr5 5800208 5800558 -193829592 + THE1B LTR MaLR 3 352 -12 887 201 8 72 chr5 5800567 5800830 -193829320 + MER4A LTR ERV1 1 246 -418 525 253 28 75 chr5 5800855 5801123 -193829027 + MER4C LTR ERV1 208 290 -175 2095 114 3 13 chr5 5801123 5801422 -193828728 - AluSc SINE Alu -13 296 1 525 253 28 75 chr5 5801422 5801591 -193828559 + MER4C LTR ERV1 290 465 0 189 304 89 13 chr5 5801592 5801671 -193828479 + MIR SINE MIR 58 142 -66 2298 88 7 3 chr5 5802153 5802449 -193827701 + AluSg SINE Alu 1 297 -13 26 101 0 0 chr5 5802945 5803034 -193827116 + AT_rich Low_complexity Low_complexity 1 89 0 1813 156 21 15 chr5 5803083 5803411 -193826739 - L1PA16 LINE L1 0 6166 5837 33 73 0 0 chr5 5804157 5804225 -193825925 + AT_rich Low_complexity Low_complexity 1 68 0 410 65 16 0 chr5 5804382 5804444 -193825706 + (TCCA)n Simple_repeat Simple_repeat 2 64 0 214 267 58 33 chr5 5805971 5806091 -193824059 + MIR SINE MIR 118 240 -22 2447 73 3 0 chr5 5806282 5806583 -193823567 + AluY SINE Alu 1 302 -9 1636 191 36 25 chr5 5807248 5807584 -193822566 + L1MA4 LINE L1 5896 6238 -62 3168 201 27 60 chr5 5807584 5808438 -193821712 + LTR1B LTR ERV1 1 826 0 1636 191 36 25 chr5 5808438 5808494 -193821656 + L1MA4 LINE L1 6238 6292 -8 350 237 10 9 chr5 5809216 5809326 -193820824 + L1PB1 LINE L1 4985 5094 -1052 2793 19 27 0 chr5 5809327 5809693 -193820457 - L1P LINE L1 -944 5202 4827 * 3876 11 0 0 chr5 5809671 5810130 -193820020 + L1PA2 LINE L1 5693 6151 -4 3514 113 40 3 chr5 5810142 5810835 -193819315 + L1PB1 LINE L1 5083 5791 -360 308 202 32 75 chr5 5810848 5810942 -193819208 - L1MC4 LINE L1 -1339 6703 6614 190 130 0 43 chr5 5810945 5810991 -193819159 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 2129 140 22 8 chr5 5810997 5811011 -193819139 + L1PB1 LINE L1 5782 5794 -357 194 88 0 29 chr5 5811011 5811045 -193819105 + (TA)n Simple_repeat Simple_repeat 2 34 0 2129 140 22 8 chr5 5811045 5811394 -193818756 + L1PB1 LINE L1 5794 6150 -1 282 216 41 21 chr5 5811520 5811617 -193818533 + (CATATA)n Simple_repeat Simple_repeat 1 99 0 1717 147 38 42 chr5 5812036 5812349 -193817801 + AluSx SINE Alu 1 312 0 260 332 39 19 chr5 5812552 5812760 -193817390 + L1ME3A LINE L1 114 325 -6071 212 128 21 21 chr5 5813181 5813228 -193816922 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 3210 261 75 45 chr5 5813365 5814294 -193815856 + L1ME3A LINE L1 1624 2524 -3691 1806 63 14 5 chr5 5814294 5814550 -193815600 + AluY SINE Alu 60 317 0 3210 261 75 45 chr5 5814550 5816071 -193814079 + L1ME3A LINE L1 2524 4117 -2098 444 278 47 21 chr5 5816116 5816350 -193813800 + L1ME2 LINE L1 5924 6163 -1 5922 215 43 28 chr5 5818592 5819959 -193810191 + L1MC/D LINE L1 3524 4869 -1440 2193 124 0 16 chr5 5819959 5820274 -193809876 + AluSx SINE Alu 2 311 -1 5922 215 43 28 chr5 5820274 5820292 -193809858 + L1MC/D LINE L1 4869 4885 -1424 2771 7 0 0 chr5 5820292 5820595 -193809555 - AluYa5 SINE Alu -8 303 1 5922 215 43 28 chr5 5820595 5821211 -193808939 + L1MC/D LINE L1 4885 5566 -743 420 266 73 78 chr5 5821270 5821627 -193808523 + L1ME3A LINE L1 4999 5353 -862 1031 263 163 48 chr5 5821665 5822419 -193807731 + L1ME3A LINE L1 5391 6231 -8 307 269 74 28 chr5 5822496 5822604 -193807546 - MIR3 SINE MIR -8 200 88 24 0 0 0 chr5 5824347 5824371 -193805779 + AT_rich Low_complexity Low_complexity 1 24 0 485 167 9 26 chr5 5825084 5825198 -193804952 + L1MA10 LINE L1 6223 6334 0 37 39 0 0 chr5 5825345 5825396 -193804754 + AT_rich Low_complexity Low_complexity 1 51 0 420 226 189 6 chr5 5825545 5825709 -193804441 + MLT1J2 LTR MaLR 190 383 -67 332 124 22 45 chr5 5825996 5826085 -193804065 + GA-rich Low_complexity Low_complexity 2 88 0 180 0 0 0 chr5 5826612 5826632 -193803518 + (GA)n Simple_repeat Simple_repeat 1 20 0 407 310 44 44 chr5 5826950 5827108 -193803042 + MER5A DNA MER1_type 30 187 -2 207 340 30 0 chr5 5828045 5828145 -193802005 - MIR SINE MIR -1 261 159 219 279 38 56 chr5 5828732 5828902 -193801248 - MER5B DNA MER1_type -7 182 2 203 333 93 47 chr5 5829190 5829319 -193800831 + L2 LINE L2 3137 3271 -1 528 268 39 15 chr5 5829779 5829942 -193800208 + MIR SINE MIR 3 167 -58 2077 106 0 45 chr5 5830482 5830794 -193799356 - AluSg1 SINE Alu -11 298 1 227 267 0 0 chr5 5832379 5832424 -193797726 + (CTA)n Simple_repeat Simple_repeat 2 46 0 2001 139 10 3 chr5 5832622 5832917 -193797233 - AluJb SINE Alu -15 297 1 225 0 0 0 chr5 5833575 5833600 -193796550 + (CA)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr5 5833717 5833746 -193796404 + AT_rich Low_complexity Low_complexity 1 29 0 1205 197 9 0 chr5 5834540 5834763 -193795387 + AluJb SINE Alu 86 310 -2 2321 216 70 4 chr5 5835449 5835976 -193794174 - MER68 LTR ERV1 0 562 1 248 326 167 8 chr5 5838071 5838203 -193791947 - MIR3 SINE MIR -46 162 10 21 36 0 0 chr5 5840046 5840074 -193790076 + AT_rich Low_complexity Low_complexity 1 28 0 306 0 0 0 chr5 5840403 5840437 -193789713 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 333 63 56 chr5 5841719 5841845 -193788305 - MIR SINE MIR -122 140 14 209 220 0 20 chr5 5842939 5842989 -193787161 + (CA)n Simple_repeat Simple_repeat 2 50 0 221 301 14 14 chr5 5843668 5843741 -193786409 - L2 LINE L2 -1 3271 3199 280 405 7 0 chr5 5845883 5846031 -193784119 - MIR SINE MIR -109 153 5 345 279 78 23 chr5 5847461 5847638 -193782512 + MIR SINE MIR 4 187 -73 7421 164 36 13 chr5 5850628 5851906 -193778244 + L1M1 LINE L1 14 1320 -6245 * 11028 151 29 23 chr5 5851905 5852987 -193777163 + L1M1 LINE L1 2252 3325 -4240 2317 65 0 0 chr5 5852987 5853264 -193776886 + AluY SINE Alu 22 298 -13 11028 151 29 23 chr5 5853264 5855783 -193774367 + L1M1 LINE L1 3325 5887 -1678 2921 129 50 58 chr5 5855763 5856061 -193774089 + L1M1 LINE L1 6453 6752 -972 * 2212 113 7 0 chr5 5856061 5856370 -193773780 + AluSp SINE Alu 1 311 -2 2921 129 50 58 chr5 5856370 5856804 -193773346 + L1M1 LINE L1 6752 7197 -527 233 174 0 29 chr5 5857957 5858026 -193772124 + (TATAA)n Simple_repeat Simple_repeat 1 67 0 342 113 68 0 chr5 5858031 5858164 -193771986 + (TA)n Simple_repeat Simple_repeat 1 142 0 35 0 0 0 chr5 5858164 5858199 -193771951 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 5858353 5858386 -193771764 + (TAA)n Simple_repeat Simple_repeat 2 34 0 473 196 0 59 chr5 5858730 5858832 -193771318 - MER3 DNA MER1_type -1 208 113 458 191 159 48 chr5 5858837 5858963 -193771187 - MER3 DNA MER1_type -26 183 44 519 333 7 89 chr5 5859446 5859861 -193770289 - L2 LINE L2 -1 3312 2932 432 82 0 0 chr5 5860436 5860497 -193769653 + (TG)n Simple_repeat Simple_repeat 1 61 0 557 261 84 51 chr5 5861342 5861653 -193768497 + L1MD2 LINE L1 5702 6022 -337 * 1346 234 75 7 chr5 5861382 5861796 -193768354 + L1MB8 LINE L1 5737 6178 0 2161 79 0 0 chr5 5861808 5862075 -193768075 + AluY SINE Alu 44 310 -1 334 64 21 0 chr5 5863375 5863422 -193766728 - THE1C LTR MaLR -322 53 6 442 81 0 27 chr5 5863949 5864023 -193766127 + (TCTCC)n Simple_repeat Simple_repeat 2 73 0 284 304 71 76 chr5 5864339 5864563 -193765587 + MIR SINE MIR 37 259 -3 300 303 97 0 chr5 5867252 5867397 -193762753 - MIR SINE MIR -6 256 98 249 221 0 0 chr5 5868365 5868433 -193761717 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 296 303 28 18 chr5 5868680 5868789 -193761361 - L2 LINE L2 -238 3034 2925 27 29 0 0 chr5 5869480 5869514 -193760636 + AT_rich Low_complexity Low_complexity 1 34 0 386 208 52 10 chr5 5870370 5870466 -193759684 - L2 LINE L2 0 3313 3214 294 304 114 10 chr5 5870517 5870718 -193759432 + LTR50 LTR ERVL 19 240 -555 694 231 231 0 chr5 5871101 5871365 -193758785 + LTR50 LTR ERVL 471 795 0 450 227 82 0 chr5 5871882 5871992 -193758158 + LTR50 LTR ERVL 9 127 -668 292 304 40 40 chr5 5872042 5872167 -193757983 + MIR3 SINE MIR 30 154 -54 193 0 0 0 chr5 5873751 5873775 -193756375 + MIR SINE MIR 129 152 -110 2152 313 23 37 chr5 5873832 5874669 -193755481 + L1M4b LINE L1 11 835 -6024 1845 186 65 35 chr5 5874670 5875007 -193755143 + L1MA9 LINE L1 5833 6158 -154 483 18 0 0 chr5 5875007 5875063 -193755087 + (CA)n Simple_repeat Simple_repeat 1 56 0 1845 186 65 35 chr5 5875063 5875118 -193755032 + L1MA9 LINE L1 6158 6210 -102 222 37 0 0 chr5 5875118 5875145 -193755005 + (TG)n Simple_repeat Simple_repeat 2 28 0 1845 186 65 35 chr5 5875145 5875180 -193754970 + L1MA9 LINE L1 6210 6274 -38 744 226 111 9 chr5 5875191 5875204 -193754946 + L1M4b LINE L1 1546 1556 -5299 2027 135 0 10 chr5 5875204 5875541 -193754609 + AluSg SINE Alu 1 310 0 744 226 111 9 chr5 5875541 5875814 -193754336 + L1M4b LINE L1 1556 1855 -5000 416 185 6 92 chr5 5875855 5875965 -193754185 + L1M4b LINE L1 2087 2205 -4753 2144 169 45 85 chr5 5875965 5876457 -193753693 + MER70A LTR ERVL 1 472 0 416 185 6 92 chr5 5876457 5876481 -193753669 + L1M4b LINE L1 2205 2609 -4349 * 3053 177 80 49 chr5 5876476 5877217 -193752933 + L1MB7 LINE L1 5421 6184 0 1302 245 40 0 chr5 5881182 5881509 -193748641 + MER63B DNA MER1_type 1 340 -96 315 260 173 36 chr5 5882052 5882329 -193747821 + L1ME LINE L1 5522 5836 -285 7409 59 10 0 chr5 5882606 5883656 -193746494 - L1PA7 LINE L1 -3 6151 5096 2205 114 3 18 chr5 5883658 5883990 -193746160 - L1PA7 LINE L1 -1127 5019 4693 324 307 203 63 chr5 5886108 5886473 -193743677 - L1M2 LINE L1 -5908 941 526 323 298 13 25 chr5 5886474 5886632 -193743518 + G-rich Low_complexity Low_complexity 2 157 0 3946 149 99 45 chr5 5887417 5887775 -193742375 - pTR5 LTR ERV1 0 2606 2269 2909 0 0 0 chr5 5887775 5888082 -193742068 + AluYa5 SINE Alu 1 307 -4 3946 149 99 45 chr5 5888082 5889140 -193741010 - pTR5 LTR ERV1 -337 2269 1524 281 276 69 41 chr5 5890211 5890376 -193739774 - Charlie8 DNA MER1_type -2164 253 104 839 198 135 21 chr5 5890546 5890738 -193739412 + MER58A DNA MER1_type 4 217 -7 183 100 0 0 chr5 5890838 5890868 -193739282 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 34 72 0 0 chr5 5892138 5892207 -193737943 + AT_rich Low_complexity Low_complexity 1 69 0 991 286 95 24 chr5 5892416 5892923 -193737227 - MLT1H LTR MaLR 0 549 7 512 209 0 0 chr5 5893300 5893405 -193736745 + MLT1B LTR MaLR 31 135 -255 269 292 49 49 chr5 5893924 5894068 -193736082 - MER5B DNA MER1_type -18 160 17 831 158 8 0 chr5 5894928 5895048 -193735102 - FLAM_C SINE Alu -21 122 2 2215 89 4 0 chr5 5895943 5896253 -193733897 + AluSp SINE Alu 1 311 0 622 232 33 7 chr5 5896368 5896519 -193733631 - MER69A DNA AcHobo -1 176 22 252 0 0 0 chr5 5896519 5896547 -193733603 + (TG)n Simple_repeat Simple_repeat 1 28 0 2228 134 132 5 chr5 5897535 5897915 -193732235 - MSTA LTR MaLR 0 428 1 376 285 72 80 chr5 5898208 5898634 -193731516 - L1 LINE L1 -1359 4787 4357 601 221 58 96 chr5 5898684 5898892 -193731258 + MIR SINE MIR 21 220 -42 24 0 0 0 chr5 5898954 5898978 -193731172 + AT_rich Low_complexity Low_complexity 1 24 0 356 326 86 29 chr5 5899062 5899375 -193730775 - L1 LINE L1 -1908 4238 3908 21 36 0 0 chr5 5899651 5899679 -193730471 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 5899725 5899753 -193730397 + AT_rich Low_complexity Low_complexity 1 28 0 1755 190 54 2 chr5 5899799 5900223 -193729927 + LTR53 LTR ERVL 1 519 0 810 143 45 184 chr5 5900471 5900694 -193729456 - 7SK RNA RNA -1 192 1 25 31 0 0 chr5 5901002 5901034 -193729116 + AT_rich Low_complexity Low_complexity 1 32 0 1590 210 7 3 chr5 5901139 5901439 -193728711 - AluJo SINE Alu -11 301 1 354 351 71 37 chr5 5902186 5902508 -193727642 - HAL1b LINE L1 -784 564 232 29 0 5 0 chr5 5903120 5903177 -193726973 + AT_rich Low_complexity Low_complexity 1 29 0 461 240 16 32 chr5 5903241 5903366 -193726784 + MIR SINE MIR 118 240 -22 35 63 0 0 chr5 5903385 5903448 -193726702 + AT_rich Low_complexity Low_complexity 1 63 0 253 301 24 0 chr5 5904745 5904828 -193725322 + L2 LINE L2 3227 3311 -2 261 0 0 0 chr5 5905213 5905242 -193724908 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 565 330 48 21 chr5 5905751 5906084 -193724066 + L1M2 LINE L1 11 352 -6497 11114 238 20 34 chr5 5906842 5909468 -193720682 + L1PA12 LINE L1 2231 4961 -2623 1988 134 108 15 chr5 5909468 5909811 -193720339 + THE1C LTR MaLR 1 375 0 11114 238 20 34 chr5 5909811 5910913 -193719237 + L1PA12 LINE L1 4961 6076 -1508 13000 150 18 25 chr5 5910921 5913162 -193716988 + L1P LINE L1 11 2237 -3909 6058 166 4 10 chr5 5913162 5914358 -193715792 + L1MA4 LINE L1 5105 6294 -6 2370 205 8 149 chr5 5915433 5915515 -193714635 - MLT2B3 LTR ERVL 0 515 423 680 92 0 17 chr5 5915515 5915635 -193714515 + (TAGA)n Simple_repeat Simple_repeat 1 118 0 2370 205 8 149 chr5 5915635 5916137 -193714013 - MLT2B3 LTR ERVL -92 423 13 279 203 0 0 chr5 5916664 5916723 -193713427 + (CA)n Simple_repeat Simple_repeat 1 59 0 22 103 0 0 chr5 5917573 5917651 -193712499 + AT_rich Low_complexity Low_complexity 1 78 0 320 308 65 54 chr5 5917740 5918094 -193712056 + L1MEd LINE L1 846 1203 -4916 748 202 75 144 chr5 5918120 5918711 -193711439 - LTR34 LTR ERV1 -4 695 135 464 160 57 19 chr5 5918784 5918890 -193711260 - MER4C LTR ERV1 -353 112 3 1413 192 63 63 chr5 5918948 5919328 -193710822 - MSTD LTR MaLR -2 394 15 218 189 0 0 chr5 5921198 5921235 -193708915 + CT-rich Low_complexity Low_complexity 2 38 0 201 273 105 70 chr5 5921292 5921464 -193708686 + MIR SINE MIR 30 207 -55 2553 222 21 9 chr5 5921872 5922404 -193707746 - MER74A LTR ERVL -18 540 3 384 304 71 30 chr5 5924383 5924551 -193705599 + MIR SINE MIR 68 242 -20 279 79 0 0 chr5 5924564 5924602 -193705548 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 631 218 15 0 chr5 5925778 5925911 -193704239 + L1MA10 LINE L1 4685 4819 -1327 * 3488 204 7 59 chr5 5925907 5926774 -193703376 + L1MA10 LINE L1 5512 6333 -1 1655 187 126 6 chr5 5927791 5928117 -193702033 + MLT1A1 LTR MaLR 1 365 0 259 160 32 96 chr5 5928649 5928743 -193701407 - Looper DNA T2_type -97 1461 1374 644 175 10 0 chr5 5928791 5928888 -193701262 + MER2 DNA MER2_type 1 98 -247 1011 251 105 19 chr5 5928888 5929203 -193700947 - MER2 DNA MER2_type 0 345 4 652 235 39 59 chr5 5929204 5929323 -193700827 + MER2 DNA MER2_type 95 215 -130 2130 130 0 0 chr5 5929323 5929622 -193700528 - AluSx SINE Alu -13 299 1 652 235 39 59 chr5 5929622 5929757 -193700393 + MER2 DNA MER2_type 215 344 -1 203 315 41 0 chr5 5930008 5930081 -193700069 + MER91C DNA MER1_type 1 76 -64 301 242 48 65 chr5 5930186 5930372 -193699778 - L1MEd LINE L1 -4891 1228 1046 1164 205 43 26 chr5 5930591 5930893 -193699257 - L1MC3 LINE L1 0 7785 7479 2271 114 0 0 chr5 5931148 5931446 -193698704 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 5931455 5931476 -193698674 + AT_rich Low_complexity Low_complexity 1 21 0 1870 125 39 11 chr5 5931495 5931776 -193698374 - AluSx SINE Alu -13 299 11 2031 157 80 27 chr5 5931926 5932302 -193697848 + MSTD LTR MaLR 1 396 0 22 35 0 0 chr5 5932451 5932480 -193697670 + AT_rich Low_complexity Low_complexity 1 29 0 715 285 191 19 chr5 5932642 5933060 -193697090 + LTR16C LTR ERVL 2 491 0 249 300 77 31 chr5 5933151 5933281 -193696869 - MIR3 SINE MIR -66 142 7 6920 82 6 6 chr5 5934912 5935811 -193694339 + HERVL-A2 LTR ERVL 4756 5654 0 2209 160 36 31 chr5 5935811 5936359 -193693791 + MLT2A2 LTR ERVL 1 554 0 217 191 0 43 chr5 5937014 5937061 -193693089 + GA-rich Low_complexity Low_complexity 4 48 0 225 0 0 0 chr5 5937325 5937350 -193692800 + (TG)n Simple_repeat Simple_repeat 2 26 0 2001 230 91 48 chr5 5937350 5937958 -193692192 - MER21B LTR ERV1 -86 777 144 355 279 23 0 chr5 5938073 5938159 -193691991 - MER21B LTR ERV1 -764 99 12 208 211 58 19 chr5 5938565 5938617 -193691533 + MIR SINE MIR 99 153 -55 1977 181 68 32 chr5 5938647 5939090 -193691060 - LTR2B LTR ERV1 0 490 32 1251 244 54 21 chr5 5939609 5939941 -193690209 - LTR48B LTR ERV1 -4 640 298 4203 169 80 38 chr5 5939942 5940916 -193689234 - LTR48B-int LTR ERV1 -508 5823 4809 375 152 0 15 chr5 5940914 5940980 -193689170 - LTR48B-int LTR ERV1 -4475 1856 1792 * 258 159 23 0 chr5 5941069 5941113 -193689037 - LTR48B-int LTR ERV1 -4699 1632 1588 299 247 11 22 chr5 5941666 5941755 -193688395 - LTR48B-int LTR ERV1 -4954 1377 1290 4766 195 53 86 chr5 5941806 5943138 -193687012 - LTR48B-int LTR ERV1 -5042 1289 1 2668 171 79 53 chr5 5943140 5943229 -193686921 - LTR48B LTR ERV1 0 644 559 2949 84 19 11 chr5 5943229 5943600 -193686550 - THE1C LTR MaLR 0 375 2 2668 171 79 53 chr5 5943600 5943909 -193686241 - LTR48B LTR ERV1 -85 559 222 2433 83 0 3 chr5 5943909 5944221 -193685929 + AluY SINE Alu 1 311 0 2668 171 79 53 chr5 5944221 5944428 -193685722 - LTR48B LTR ERV1 -422 222 22 704 270 89 31 chr5 5944594 5944853 -193685297 + MLT1J LTR MaLR 39 312 -199 201 133 0 0 chr5 5946030 5946060 -193684090 + (GA)n Simple_repeat Simple_repeat 1 30 0 1366 131 66 0 chr5 5946092 5946290 -193683860 - AluJb SINE Alu -16 296 86 26 0 0 0 chr5 5946294 5946320 -193683830 + AT_rich Low_complexity Low_complexity 1 26 0 388 231 92 75 chr5 5946865 5946909 -193683241 - MIR SINE MIR -64 198 156 3342 159 35 0 chr5 5946909 5947444 -193682706 + MER41C LTR ERV1 1 554 0 388 231 92 75 chr5 5947444 5947572 -193682578 - MIR SINE MIR -106 156 23 5354 141 33 20 chr5 5948781 5949663 -193680487 + MER4D LTR ERV1 3 895 -8 606 118 0 0 chr5 5949957 5950050 -193680100 + (TA)n Simple_repeat Simple_repeat 2 94 0 2895 83 103 5 chr5 5950051 5950459 -193679691 + LTR7 LTR ERV1 1 448 -2 208 256 0 0 chr5 5950460 5950503 -193679647 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 329 161 11 75 chr5 5950660 5950753 -193679397 + L1MB4 LINE L1 6093 6179 -1 1040 153 38 169 chr5 5950934 5951206 -193678944 + L1MD3 LINE L1 7547 7759 -236 2214 76 0 0 chr5 5951206 5951481 -193678669 + AluY SINE Alu 26 300 -11 1040 153 38 169 chr5 5951481 5951580 -193678570 + L1MD3 LINE L1 7759 7869 -126 913 227 97 51 chr5 5951599 5952166 -193677984 - LTR48 LTR ERV1 -4 783 1 575 224 2 3 chr5 5952166 5952289 -193677861 + L1MD3 LINE L1 6240 6359 0 250 265 34 6 chr5 5952452 5952539 -193677611 + MIR SINE MIR 58 146 -62 1420 220 26 47 chr5 5952539 5952794 -193677356 - MLT1A2 LTR MaLR 0 374 128 1906 121 220 14 chr5 5952794 5953149 -193677001 - MSTA LTR MaLR 0 428 1 1420 220 26 47 chr5 5953149 5953275 -193676875 - MLT1A2 LTR MaLR -246 128 1 2221 165 49 21 chr5 5954211 5954727 -193675423 + MLT2A2 LTR ERVL 1 554 0 180 125 0 0 chr5 5957762 5957794 -193672356 + (TG)n Simple_repeat Simple_repeat 1 32 0 664 223 13 25 chr5 5957821 5957978 -193672172 - Tigger2 DNA MER2_type -16 2702 2548 * 866 173 46 20 chr5 5957954 5958151 -193671999 - Tigger2 DNA MER2_type -2509 209 8 847 151 50 13 chr5 5958421 5958580 -193671570 - L1MC2 LINE L1 -13 6331 6167 23 0 0 0 chr5 5959878 5959901 -193670249 + AT_rich Low_complexity Low_complexity 1 23 0 384 262 10 0 chr5 5959923 5960026 -193670124 + MER5B DNA MER1_type 1 104 -74 205 79 53 79 chr5 5960116 5960154 -193669996 - MER5A DNA MER1_type -152 37 1 617 201 109 35 chr5 5960175 5960349 -193669801 + MER5A DNA MER1_type 1 187 -2 2099 134 3 0 chr5 5961526 5961833 -193668317 - AluSx SINE Alu -4 308 1 305 196 0 0 chr5 5963357 5963413 -193666737 + L1MC4 LINE L1 6648 6703 -1339 22 0 0 0 chr5 5963852 5963874 -193666276 + AT_rich Low_complexity Low_complexity 1 22 0 1687 41 0 0 chr5 5965155 5965349 -193664801 + L1PA5 LINE L1 5957 6150 -4 28 29 0 0 chr5 5965395 5965430 -193664720 + AT_rich Low_complexity Low_complexity 1 35 0 1695 244 17 3 chr5 5967536 5967896 -193662254 - MLT1A1 LTR MaLR 0 365 1 284 179 30 0 chr5 5968364 5968431 -193661719 + CT-rich Low_complexity Low_complexity 3 71 0 203 346 31 43 chr5 5968814 5968976 -193661174 - L2 LINE L2 -466 2848 2689 407 306 40 30 chr5 5969012 5969211 -193660939 - L1M4 LINE L1 -1104 5042 4842 292 166 5 242 chr5 5969446 5969657 -193660493 + MLT1H LTR MaLR 279 439 -110 1836 237 60 38 chr5 5970282 5970885 -193659265 - L1MC4 LINE L1 -248 7794 7179 589 304 116 42 chr5 5970916 5971374 -193658776 - LTR67 LTR ERVL -5 552 61 197 200 36 0 chr5 5971434 5971489 -193658661 + T-rich Low_complexity Low_complexity 5 61 0 262 291 0 38 chr5 5972966 5973045 -193657105 + CT-rich Low_complexity Low_complexity 2 77 0 440 346 33 22 chr5 5973305 5973522 -193656628 + MIR SINE MIR 3 226 -36 25 51 0 0 chr5 5974842 5974881 -193655269 + AT_rich Low_complexity Low_complexity 1 39 0 2184 108 0 3 chr5 5976303 5976598 -193653552 + AluSx SINE Alu 1 294 -18 1137 210 30 63 chr5 5976691 5976966 -193653184 + MER33 DNA MER1_type 3 267 -2318 2226 80 3 13 chr5 5976966 5977266 -193652884 - AluSp SINE Alu -16 297 1 1137 210 30 63 chr5 5977266 5977323 -193652827 + MER33 DNA MER1_type 267 324 0 186 226 83 60 chr5 5977527 5977611 -193652539 - MIR SINE MIR -140 122 37 194 279 0 0 chr5 5980662 5980705 -193649445 - MIR SINE MIR -109 153 111 189 74 0 0 chr5 5980761 5980788 -193649362 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 201 196 0 0 chr5 5981104 5981150 -193649000 + (TA)n Simple_repeat Simple_repeat 2 47 0 4903 106 10 23 chr5 5981625 5982359 -193647791 + L1PA12 LINE L1 5333 6062 -106 2211 304 140 22 chr5 5983872 5985369 -193644781 + L2 LINE L2 1382 3107 -206 2656 111 3 11 chr5 5985369 5985747 -193644403 + THE1C LTR MaLR 1 375 0 2211 304 140 22 chr5 5985747 5985972 -193644178 + L2 LINE L2 3107 3304 -9 351 200 16 96 chr5 5986033 5986158 -193643992 - MIR SINE MIR -138 124 10 192 314 35 47 chr5 5986177 5986198 -193643952 - L2 LINE L2 -54 3218 3198 1925 193 85 9 chr5 5986198 5986623 -193643527 - MSTB2 LTR MaLR 0 457 1 192 314 35 47 chr5 5986623 5986687 -193643463 - L2 LINE L2 -74 3198 3134 1592 243 49 27 chr5 5986922 5987411 -193642739 - MLT1D LTR MaLR 0 505 6 208 174 0 22 chr5 5987722 5987768 -193642382 + T-rich Low_complexity Low_complexity 3 47 0 2319 57 0 0 chr5 5988488 5988821 -193641329 - AluY SINE Alu 0 333 1 2290 107 0 0 chr5 5988891 5989191 -193640959 - AluY SINE Alu -11 300 1 215 284 210 33 chr5 5989214 5989457 -193640693 - L2 LINE L2 -527 2787 2502 26 93 0 0 chr5 5990126 5990201 -193639949 + AT_rich Low_complexity Low_complexity 1 75 0 1616 179 14 0 chr5 5990632 5990946 -193639204 - AluJb SINE Alu 0 318 1 1108 278 65 15 chr5 5992259 5992662 -193637488 + LTR16A LTR ERVL 25 447 -3 1832 132 30 40 chr5 5993404 5993776 -193636374 - THE1C LTR MaLR 0 375 8 3641 224 7 45 chr5 5994308 5994325 -193635825 - L1P LINE L1 -4290 1856 1840 14056 128 7 6 chr5 5994325 5997420 -193632730 - L1PA8A LINE L1 -6 6440 3345 3641 224 7 45 chr5 5997420 5998474 -193631676 - L1P LINE L1 -4306 1840 826 390 98 0 0 chr5 5998451 5998502 -193631648 - L1PA8A LINE L1 -4774 1101 1051 * 5121 100 16 12 chr5 5998602 5999415 -193630735 - L1PA8A LINE L1 -4801 1074 259 667 194 20 101 chr5 5999650 5999897 -193630253 + LTR12 LTR ERV1 238 464 -250 1535 105 3 88 chr5 5999926 6000211 -193629939 - L1PA8A LINE L1 -5613 262 2 189 215 62 62 chr5 6000968 6001033 -193629117 - MIR SINE MIR -88 174 110 715 215 34 10 chr5 6001359 6001564 -193628586 - MLT1C LTR MaLR -251 216 7 22 35 0 0 chr5 6002517 6002546 -193627604 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 6002996 6003017 -193627133 + AT_rich Low_complexity Low_complexity 1 21 0 2234 102 10 0 chr5 6005808 6006112 -193624038 + AluSp SINE Alu 1 307 -6 273 325 95 31 chr5 6006761 6007118 -193623032 + L3 LINE CR1 832 1211 -366 1436 96 0 40 chr5 6007657 6007856 -193622294 - AluSg SINE Alu -119 191 1 22 0 0 0 chr5 6008337 6008359 -193621791 + AT_rich Low_complexity Low_complexity 1 22 0 288 170 0 0 chr5 6009944 6009997 -193620153 + (TG)n Simple_repeat Simple_repeat 2 54 0 744 226 92 36 chr5 6010324 6010745 -193619405 - MLT1D LTR MaLR -4 501 21 1360 110 24 89 chr5 6011042 6011288 -193618862 - MER30 DNA MER1_type 0 230 1 472 130 0 0 chr5 6011925 6011994 -193618156 + AluSq/x SINE Alu 84 152 -160 229 203 29 14 chr5 6012934 6013003 -193617147 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 565 316 120 43 chr5 6013999 6014669 -193615481 - L2 LINE L2 -30 3283 2567 1257 149 65 84 chr5 6015410 6015826 -193614324 - MSTA LTR MaLR -12 416 9 627 267 90 54 chr5 6015848 6016462 -193613688 + L1MEc LINE L1 827 1462 -4934 307 127 0 0 chr5 6016479 6016534 -193613616 + L1MA3 LINE L1 6250 6304 -1 315 223 19 19 chr5 6016699 6016802 -193613348 + L1M4 LINE L1 4805 4907 -1239 * 4261 208 31 22 chr5 6016795 6017206 -193612944 - L1MA10 LINE L1 -2 6332 5926 2240 139 11 24 chr5 6017206 6017586 -193612564 - THE1C LTR MaLR 0 375 1 9395 126 12 73 chr5 6017586 6019267 -193610883 - THE1C-int LTR MaLR 0 1580 1 2026 174 13 16 chr5 6019272 6019646 -193610504 - THE1C LTR MaLR 0 375 3 4261 208 31 22 chr5 6019646 6021097 -193609053 - L1MA10 LINE L1 -411 5923 4438 1026 243 117 23 chr5 6021100 6021468 -193608682 + MSTD LTR MaLR 1 396 0 1822 196 17 46 chr5 6021475 6022417 -193607733 - L1MA10 LINE L1 -1031 5115 3757 231 26 26 0 chr5 6022415 6022454 -193607696 + L1PA7 LINE L1 5092 5131 -1015 * 5622 64 18 0 chr5 6022554 6023396 -193606754 + L1PA7 LINE L1 5183 6039 -115 1747 171 39 15 chr5 6023399 6023733 -193606417 + THE1B LTR MaLR 23 364 0 10030 106 24 35 chr5 6023734 6024233 -193605917 + THE1B-int LTR MaLR 2 505 -1075 2515 82 17 6 chr5 6024233 6024585 -193605565 + L1PA8A LINE L1 5776 6131 0 10030 106 24 35 chr5 6024585 6025681 -193604469 + THE1B-int LTR MaLR 505 1580 0 1915 144 57 28 chr5 6025681 6026035 -193604115 + THE1B LTR MaLR 1 364 0 417 272 159 46 chr5 6026041 6026324 -193603826 + L1M4 LINE L1 5046 5360 -786 229 218 0 0 chr5 6026326 6026381 -193603769 + L1MB7 LINE L1 2409 2463 -3921 4805 160 48 25 chr5 6026441 6027551 -193602599 + L1MA7 LINE L1 5158 6291 0 1647 225 25 94 chr5 6027560 6027818 -193602332 + L1MB7 LINE L1 4776 5050 -1332 342 80 0 0 chr5 6027818 6027868 -193602282 + (TA)n Simple_repeat Simple_repeat 2 51 0 1647 225 25 94 chr5 6027868 6028332 -193601818 + L1MB7 LINE L1 5050 5448 -934 335 218 92 3 chr5 6028552 6028710 -193601440 + L1MB7 LINE L1 5585 5773 -643 2321 233 5 19 chr5 6028802 6029417 -193600733 + L1MB7 LINE L1 5806 6411 -9 338 0 24 0 chr5 6030227 6030269 -193599881 + (TG)n Simple_repeat Simple_repeat 2 44 0 227 309 37 0 chr5 6030975 6031056 -193599094 + L3 LINE CR1 1492 1575 -2 1268 215 21 38 chr5 6031130 6031470 -193598680 + MER31B LTR ERV1 3 336 -130 245 230 14 14 chr5 6031498 6031572 -193598578 + MER67B LTR ERV1 584 657 -4 971 208 58 5 chr5 6031572 6031725 -193598425 + MER20 DNA MER1_type 2 170 -49 390 74 0 0 chr5 6031725 6031779 -193598371 + (CA)n Simple_repeat Simple_repeat 1 54 0 971 208 58 5 chr5 6031779 6031832 -193598318 + MER20 DNA MER1_type 170 219 0 280 252 106 31 chr5 6032007 6032268 -193597882 - MLT1J1 LTR MaLR -10 436 152 246 283 112 74 chr5 6033272 6033541 -193596609 - MLT1J2 LTR MaLR -65 385 107 984 162 149 4 chr5 6033686 6033921 -193596229 - LTR18B LTR ERVL -87 527 259 1366 106 11 0 chr5 6034140 6034329 -193595821 - LTR18B LTR ERVL -423 191 1 272 292 42 0 chr5 6034329 6034420 -193595730 - MLT1J1 LTR MaLR -343 103 9 986 257 159 0 chr5 6036238 6036495 -193593655 - MER77 LTR ERV1 0 605 308 1071 232 62 77 chr5 6036612 6036948 -193593202 - MER77 LTR ERV1 -253 352 22 234 0 0 0 chr5 6037503 6037529 -193592621 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1782 152 43 0 chr5 6037801 6038077 -193592073 + AluJo SINE Alu 6 293 -19 1091 213 126 60 chr5 6038961 6039000 -193591150 - MLT2B1 LTR ERVL -1 413 378 234 91 0 0 chr5 6039000 6039033 -193591117 + (TG)n Simple_repeat Simple_repeat 1 33 0 1091 213 126 60 chr5 6039033 6039422 -193590728 - MLT2B1 LTR ERVL -36 378 1 224 368 0 40 chr5 6040204 6040329 -193589821 - L2 LINE L2 -13 3300 3181 485 265 139 0 chr5 6041904 6042070 -193588080 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr5 6042295 6042323 -193587827 + AT_rich Low_complexity Low_complexity 1 28 0 577 301 79 105 chr5 6043545 6044217 -193585933 + L3 LINE CR1 36 685 -892 5328 147 14 3 chr5 6044217 6045433 -193584717 + L1PA15 LINE L1 4933 6161 -4 577 301 79 105 chr5 6045433 6045572 -193584578 + L3 LINE CR1 685 826 -751 2308 156 48 22 chr5 6045635 6046052 -193584098 - MSTA LTR MaLR 0 428 1 240 252 79 47 chr5 6046387 6046514 -193583636 + L3 LINE CR1 1426 1556 -21 405 0 0 0 chr5 6046570 6046615 -193583535 + (CA)n Simple_repeat Simple_repeat 1 45 0 2290 101 0 3 chr5 6048617 6048915 -193581235 - AluSq SINE Alu -16 297 1 434 278 6 17 chr5 6050189 6050369 -193579781 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 212 307 20 7 chr5 6050388 6050538 -193579612 + (TATATG)n Simple_repeat Simple_repeat 3 154 0 433 297 11 0 chr5 6050617 6050792 -193579358 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 346 319 0 0 chr5 6050811 6050977 -193579173 + (TATATG)n Simple_repeat Simple_repeat 4 169 0 210 333 7 20 chr5 6050980 6051130 -193579020 + (CATATA)n Simple_repeat Simple_repeat 3 150 0 272 29 0 0 chr5 6052294 6052329 -193577821 + L1PA6 LINE L1 6111 6145 -9 213 39 0 0 chr5 6052686 6052712 -193577438 + (TG)n Simple_repeat Simple_repeat 2 27 0 508 173 9 27 chr5 6053690 6053800 -193576350 + MER67D LTR ERV1 1 108 -406 339 188 25 12 chr5 6053835 6053915 -193576235 + MER67D LTR ERV1 430 510 -4 2313 154 35 31 chr5 6054343 6054892 -193575258 + MLT2A2 LTR ERVL 1 554 0 225 0 0 0 chr5 6055792 6055817 -193574333 + (TC)n Simple_repeat Simple_repeat 2 26 0 1813 147 6 35 chr5 6056572 6056884 -193573266 + AluJb SINE Alu 1 303 -9 26 30 0 0 chr5 6056949 6056982 -193573168 + AT_rich Low_complexity Low_complexity 1 33 0 2217 110 0 26 chr5 6057274 6057583 -193572567 - AluSq SINE Alu -12 301 1 445 228 33 0 chr5 6058870 6058962 -193571188 - MLT1B LTR MaLR -32 358 264 1246 208 82 38 chr5 6058966 6059332 -193570818 + MLT1B LTR MaLR 6 387 -3 2492 67 0 3 chr5 6060120 6060420 -193569730 + AluY SINE Alu 1 299 -12 183 80 0 0 chr5 6063489 6063514 -193566636 + (A)n Simple_repeat Simple_repeat 1 25 0 240 227 18 118 chr5 6063853 6063963 -193566187 - MIR SINE MIR -7 255 157 800 114 0 64 chr5 6063965 6064105 -193566045 - AluSg/x SINE Alu -1 309 179 180 0 0 0 chr5 6064105 6064125 -193566025 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 227 323 43 0 chr5 6064133 6064226 -193565924 - MIR SINE MIR -110 152 56 297 287 33 47 chr5 6064495 6064645 -193565505 + MIR SINE MIR 91 238 -24 1217 241 177 9 chr5 6066192 6066656 -193563494 + MER74A LTR ERVL 1 542 -16 1519 126 13 4 chr5 6067140 6067378 -193562772 + L1MA2 LINE L1 6065 6304 0 201 39 0 0 chr5 6068332 6068358 -193561792 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2502 76 0 0 chr5 6069236 6069537 -193560613 + AluSc SINE Alu 1 301 -8 2145 126 0 3 chr5 6069857 6070158 -193559992 + AluSx SINE Alu 1 300 -12 744 273 10 10 chr5 6070255 6070464 -193559686 - LTR40a LTR ERVL -303 216 8 1475 178 7 40 chr5 6074057 6074360 -193555790 - L1MA7 LINE L1 -410 5881 5589 1903 180 35 20 chr5 6074360 6074757 -193555393 + L1MA7 LINE L1 5883 6288 -3 745 145 26 0 chr5 6074778 6074895 -193555255 + FRAM SINE Alu 37 156 -20 3168 198 20 37 chr5 6075544 6075789 -193554361 - L1MA9 LINE L1 -35 6277 6030 2335 99 0 0 chr5 6075789 6076082 -193554068 - AluSg1 SINE Alu -16 293 1 3168 198 20 37 chr5 6076082 6076573 -193553577 - L1MA9 LINE L1 -282 6030 5553 2857 195 90 12 chr5 6076569 6076914 -193553236 + L1M2 LINE L1 4589 4906 -1398 * 189 0 0 0 chr5 6076914 6076935 -193553215 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2857 195 90 12 chr5 6076935 6077506 -193552644 + L1M2 LINE L1 4906 5561 -743 27 0 0 0 chr5 6077608 6077635 -193552515 + AT_rich Low_complexity Low_complexity 1 27 0 280 301 19 0 chr5 6077773 6077876 -193552274 - L1ME3A LINE L1 -227 5943 5839 240 207 81 23 chr5 6078032 6078119 -193552031 + L1MC4 LINE L1 6612 6703 -1339 238 102 0 41 chr5 6078130 6078179 -193551971 + (TA)n Simple_repeat Simple_repeat 1 47 0 776 230 95 24 chr5 6078336 6078705 -193551445 - L1MC5 LINE L1 -225 7736 7342 245 206 24 40 chr5 6078710 6078751 -193551399 + (CATATA)n Simple_repeat Simple_repeat 6 46 -83 2075 148 52 56 chr5 6078751 6079198 -193550952 + MER65A LTR ERV1 1 445 0 245 206 24 40 chr5 6079198 6079282 -193550868 + (CATATA)n Simple_repeat Simple_repeat 46 129 0 1963 193 32 17 chr5 6079499 6079909 -193550241 + MLT2C2 LTR ERVL 1 416 -48 243 164 0 0 chr5 6079925 6079986 -193550164 + (CA)n Simple_repeat Simple_repeat 2 62 0 195 42 0 0 chr5 6080020 6080044 -193550106 + (TA)n Simple_repeat Simple_repeat 2 25 0 273 208 0 62 chr5 6080061 6080157 -193549993 + L1MC4 LINE L1 6614 6703 -1339 180 0 0 0 chr5 6080161 6080181 -193549969 + (GA)n Simple_repeat Simple_repeat 2 21 0 245 139 93 0 chr5 6080199 6080242 -193549908 + MLT2C2 LTR ERVL 472 518 -2 255 299 17 26 chr5 6081421 6081538 -193548612 + MIR SINE MIR 97 212 -50 1147 207 29 0 chr5 6081620 6081828 -193548322 + MER20 DNA MER1_type 6 219 0 8619 48 0 0 chr5 6084044 6085013 -193545137 - LTR5 LTR ERVK 0 969 1 1702 198 91 82 chr5 6085600 6086115 -193544035 - MLT2B1 LTR ERVL 0 520 1 929 245 54 51 chr5 6086649 6086980 -193543170 - MLT1E LTR MaLR -199 394 63 373 66 33 0 chr5 6087654 6087715 -193542435 + (TG)n Simple_repeat Simple_repeat 2 64 0 1713 226 6 43 chr5 6089121 6089535 -193540615 - L1ME1 LINE L1 -168 6067 5672 2178 82 43 0 chr5 6089535 6089814 -193540336 - AluY SINE Alu -5 306 16 1713 226 6 43 chr5 6089814 6089882 -193540268 - L1ME1 LINE L1 -563 5672 5603 1032 274 84 37 chr5 6089890 6090488 -193539662 - L1ME1 LINE L1 -2054 4161 3536 875 150 4 177 chr5 6090761 6091003 -193539147 + MER51C LTR ERV1 446 640 0 421 287 15 7 chr5 6091006 6091142 -193539008 - L1ME1 LINE L1 -2681 3534 3398 3902 185 62 6 chr5 6091146 6091952 -193538198 - L1MB2 LINE L1 -5 6166 5316 3328 262 56 30 chr5 6091944 6094694 -193535456 - L1ME1 LINE L1 -2797 3418 639 * 458 277 196 5 chr5 6094701 6094885 -193535265 + MER20 DNA MER1_type 1 219 0 1402 297 41 17 chr5 6094888 6095477 -193534673 - L1ME1 LINE L1 -5760 636 34 27 62 0 0 chr5 6095749 6095797 -193534353 + AT_rich Low_complexity Low_complexity 1 48 0 597 140 13 33 chr5 6097097 6097247 -193532903 + CT-rich Low_complexity Low_complexity 2 148 0 22 0 0 0 chr5 6097964 6097986 -193532164 + AT_rich Low_complexity Low_complexity 1 22 0 2290 131 41 16 chr5 6098292 6098658 -193531492 + THE1C LTR MaLR 1 375 0 7963 159 40 33 chr5 6098658 6100228 -193529922 + THE1C-int LTR MaLR 1 1580 0 2214 138 42 8 chr5 6100230 6100591 -193529559 + THE1C LTR MaLR 3 375 0 1131 225 14 0 chr5 6100851 6101073 -193529077 + AluJb SINE Alu 5 229 -83 1110 238 47 0 chr5 6102101 6102378 -193527772 - MER58B DNA MER1_type -6 335 46 395 303 117 7 chr5 6104544 6104825 -193525325 + MLT1J2 LTR MaLR 18 329 -121 277 300 0 0 chr5 6105814 6105894 -193524256 + (TG)n Simple_repeat Simple_repeat 2 81 0 1647 110 44 0 chr5 6106816 6107043 -193523107 - AluSg/x SINE Alu -4 306 70 644 211 172 16 chr5 6108656 6108912 -193521238 - MER69 DNA AcHobo -94 2432 2137 995 271 83 95 chr5 6108982 6109432 -193520718 - MER69B DNA AcHobo -1609 917 480 2242 109 0 10 chr5 6109432 6109735 -193520415 - AluSq SINE Alu -13 300 1 995 271 83 95 chr5 6109735 6110140 -193520010 - MER69B DNA AcHobo -2046 480 72 2479 67 0 7 chr5 6110623 6110923 -193519227 - AluY SINE Alu -13 298 1 2225 121 0 13 chr5 6110930 6111245 -193518905 - AluSq SINE Alu -1 312 2 22 0 0 0 chr5 6111421 6111443 -193518707 + AT_rich Low_complexity Low_complexity 1 22 0 223 249 73 0 chr5 6112778 6112870 -193517280 + MER5A DNA MER1_type 63 152 -26 261 0 0 0 chr5 6112942 6112971 -193517179 + (A)n Simple_repeat Simple_repeat 1 29 0 378 245 23 35 chr5 6113826 6113967 -193516183 + MIR SINE MIR 45 184 -63 2212 167 53 17 chr5 6114028 6114412 -193515738 - MSTA LTR MaLR 0 428 27 2955 63 115 5 chr5 6114412 6114771 -193515379 + MLT2A1 LTR ERVL 2 411 -33 905 90 0 8 chr5 6114771 6114905 -193515245 + (TCTA)n Simple_repeat Simple_repeat 3 135 0 2955 63 115 5 chr5 6114905 6114944 -193515206 + MLT2A1 LTR ERVL 411 444 0 2212 167 53 17 chr5 6114944 6114972 -193515178 - MSTA LTR MaLR -401 27 1 37743 93 13 7 chr5 6116248 6122402 -193507748 + L1PA6 LINE L1 11 6154 0 35 24 0 0 chr5 6122644 6122686 -193507464 + AT_rich Low_complexity Low_complexity 1 42 0 312 27 0 0 chr5 6122981 6123018 -193507132 + (TG)n Simple_repeat Simple_repeat 2 38 0 246 193 0 0 chr5 6123655 6123712 -193506438 + (CA)n Simple_repeat Simple_repeat 2 58 0 1520 257 38 16 chr5 6127410 6127861 -193502289 - LTR53 LTR ERVL -7 512 52 547 270 37 18 chr5 6128401 6128564 -193501586 + MIR SINE MIR 60 225 -37 775 267 115 33 chr5 6128605 6129032 -193501118 + MLT1C LTR MaLR 1 462 -5 191 214 0 71 chr5 6129134 6129190 -193500960 - L2 LINE L2 -5 3267 3216 229 189 0 0 chr5 6130144 6130181 -193499969 + MER81 DNA DNA 1 37 -77 238 301 0 0 chr5 6133118 6133191 -193496959 - MIR SINE MIR -129 133 61 2469 146 34 2 chr5 6134194 6134605 -193495545 + MSTA LTR MaLR 1 424 -4 650 242 159 5 chr5 6134853 6135267 -193494883 + MLT1G1 LTR MaLR 30 541 -49 1386 207 34 14 chr5 6135864 6136159 -193493991 + AluJb SINE Alu 1 301 -1 696 276 148 6 chr5 6138656 6138993 -193491157 - L1MC4 LINE L1 -151 7891 7507 2080 140 21 32 chr5 6139098 6139477 -193490673 - THE1C LTR MaLR 0 375 1 1527 196 145 0 chr5 6140958 6141310 -193488840 - MER57A LTR ERV1 0 403 1 320 44 0 0 chr5 6141348 6141393 -193488757 + AluSp/q SINE Alu 255 299 -4 519 219 0 47 chr5 6143292 6143420 -193486730 + MLT1A1 LTR MaLR 1 122 -243 1234 202 34 15 chr5 6143738 6144000 -193486150 + MLT1A1 LTR MaLR 99 365 0 5405 130 13 7 chr5 6144319 6145297 -193484853 - L1PA14 LINE L1 -66 6095 5112 1801 140 184 11 chr5 6145463 6145828 -193484322 + MSTA LTR MaLR 1 428 0 993 114 0 0 chr5 6145850 6145990 -193484160 + MSTA-int LTR MaLR 59 198 -1382 238 269 0 0 chr5 6145990 6146042 -193484108 + (TG)n Simple_repeat Simple_repeat 2 53 0 2488 159 33 28 chr5 6146342 6146801 -193483349 - MLT1C LTR MaLR -1 466 6 326 89 78 0 chr5 6146923 6147013 -193483137 + (TCTA)n Simple_repeat Simple_repeat 2 98 0 2356 106 0 6 chr5 6148294 6148606 -193481544 - AluSp SINE Alu -2 311 2 249 287 53 0 chr5 6149280 6149374 -193480776 + MIR SINE MIR 132 230 -32 21 95 0 0 chr5 6150093 6150156 -193479994 + AT_rich Low_complexity Low_complexity 1 63 0 240 291 57 70 chr5 6150170 6150277 -193479873 - L1P LINE L1 -2364 3782 3676 288 0 0 0 chr5 6150277 6150309 -193479841 + (TG)n Simple_repeat Simple_repeat 2 33 0 240 291 57 70 chr5 6150309 6150359 -193479791 - L1P LINE L1 -2470 3676 3627 2116 172 96 50 chr5 6202244 6202537 -193427613 - LTR48B LTR ERV1 -99 545 218 2433 83 0 3 chr5 6202537 6202849 -193427301 + AluY SINE Alu 1 311 0 2116 172 96 50 chr5 6202849 6203056 -193427094 - LTR48B LTR ERV1 -426 218 22 704 270 89 31 chr5 6203222 6203481 -193426669 + MLT1J LTR MaLR 39 312 -199 201 133 0 0 chr5 6204658 6204688 -193425462 + (GA)n Simple_repeat Simple_repeat 1 30 0 1366 131 66 0 chr5 6204720 6204918 -193425232 - AluJb SINE Alu -16 296 86 26 0 0 0 chr5 6204922 6204948 -193425202 + AT_rich Low_complexity Low_complexity 1 26 0 388 231 92 75 chr5 6205493 6205537 -193424613 - MIR SINE MIR -64 198 156 3365 160 34 0 chr5 6205537 6206073 -193424077 + MER41C LTR ERV1 1 554 0 388 231 92 75 chr5 6206073 6206201 -193423949 - MIR SINE MIR -106 156 23 5367 139 33 20 chr5 6207411 6208293 -193421857 + MER4D LTR ERV1 3 895 -8 660 111 0 0 chr5 6208588 6208687 -193421463 + (TA)n Simple_repeat Simple_repeat 2 100 0 2901 83 103 5 chr5 6208688 6209096 -193421054 + LTR7 LTR ERV1 1 448 -2 208 256 0 0 chr5 6209097 6209140 -193421010 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 329 161 11 75 chr5 6209297 6209390 -193420760 + L1MB4 LINE L1 6093 6179 -1 1040 153 38 169 chr5 6209571 6209843 -193420307 + L1MD3 LINE L1 7547 7759 -236 2236 75 0 0 chr5 6209843 6210121 -193420029 + AluY SINE Alu 26 303 -8 1040 153 38 169 chr5 6210121 6210220 -193419930 + L1MD3 LINE L1 7759 7869 -126 913 223 98 53 chr5 6210239 6210806 -193419344 - LTR48 LTR ERV1 -4 783 1 575 224 2 3 chr5 6210806 6210929 -193419221 + L1MD3 LINE L1 6240 6359 0 250 265 34 6 chr5 6211092 6211179 -193418971 + MIR SINE MIR 58 146 -62 1376 214 28 64 chr5 6211179 6211440 -193418710 - MLT1A2 LTR MaLR 0 374 130 1912 120 223 11 chr5 6211440 6211790 -193418360 - MSTA LTR MaLR -4 424 1 1376 214 28 64 chr5 6211790 6211916 -193418234 - MLT1A2 LTR MaLR -244 130 1 2237 167 46 21 chr5 6212852 6213369 -193416781 + MLT2A2 LTR ERVL 1 554 0 180 125 0 0 chr5 6216404 6216436 -193413714 + (TG)n Simple_repeat Simple_repeat 1 32 0 664 223 13 25 chr5 6216463 6216620 -193413530 - Tigger2 DNA MER2_type -16 2702 2548 * 866 173 46 20 chr5 6216596 6216793 -193413357 - Tigger2 DNA MER2_type -2509 209 8 885 150 44 12 chr5 6217063 6217223 -193412927 - L1MC2 LINE L1 -13 6331 6167 23 0 0 0 chr5 6218522 6218545 -193411605 + AT_rich Low_complexity Low_complexity 1 23 0 384 262 10 0 chr5 6218567 6218670 -193411480 + MER5B DNA MER1_type 1 104 -74 205 79 53 79 chr5 6218762 6218800 -193411350 - MER5A DNA MER1_type -152 37 1 602 195 109 35 chr5 6218821 6218995 -193411155 + MER5A DNA MER1_type 1 187 -2 2099 134 3 0 chr5 6220172 6220479 -193409671 - AluSx SINE Alu -4 308 1 305 196 0 0 chr5 6222003 6222059 -193408091 + L1MC4 LINE L1 6648 6703 -1339 22 0 0 0 chr5 6222492 6222514 -193407636 + AT_rich Low_complexity Low_complexity 1 22 0 1687 41 0 0 chr5 6223795 6223989 -193406161 + L1PA5 LINE L1 5957 6150 -4 24 32 0 0 chr5 6224035 6224066 -193406084 + AT_rich Low_complexity Low_complexity 1 31 0 358 235 99 0 chr5 6224306 6224387 -193405763 - MER117 DNA MER1_type -107 90 2 925 181 0 6 chr5 6224609 6224769 -193405381 - AluSg/x SINE Alu -38 272 114 636 174 36 36 chr5 6224880 6225018 -193405132 - AluSg/x SINE Alu -81 229 92 1695 244 17 3 chr5 6226986 6227346 -193402804 - MLT1A1 LTR MaLR 0 365 1 284 179 30 0 chr5 6227816 6227883 -193402267 + CT-rich Low_complexity Low_complexity 3 71 0 203 346 31 43 chr5 6228266 6228428 -193401722 - L2 LINE L2 -466 2848 2689 407 306 40 30 chr5 6228464 6228663 -193401487 - L1M4 LINE L1 -1104 5042 4842 292 166 5 242 chr5 6228898 6229109 -193401041 + MLT1H LTR MaLR 279 439 -110 1836 237 60 38 chr5 6229734 6230337 -193399813 - L1MC4 LINE L1 -248 7794 7179 615 301 116 42 chr5 6230368 6230826 -193399324 - LTR67 LTR ERVL -5 552 61 197 200 36 0 chr5 6230886 6230941 -193399209 + T-rich Low_complexity Low_complexity 5 61 0 262 291 0 38 chr5 6232423 6232502 -193397648 + CT-rich Low_complexity Low_complexity 2 77 0 466 336 33 22 chr5 6232762 6232979 -193397171 + MIR SINE MIR 3 226 -36 25 51 0 0 chr5 6234304 6234343 -193395807 + AT_rich Low_complexity Low_complexity 1 39 0 2199 105 0 3 chr5 6235765 6236060 -193394090 + AluSx SINE Alu 1 294 -18 1137 210 30 63 chr5 6236153 6236428 -193393722 + MER33 DNA MER1_type 3 267 -2318 2344 81 3 0 chr5 6236428 6236723 -193393427 - AluSp SINE Alu -17 296 1 1137 210 30 63 chr5 6236723 6236780 -193393370 + MER33 DNA MER1_type 267 324 0 186 226 83 60 chr5 6236984 6237068 -193393082 - MIR SINE MIR -140 122 37 194 279 0 0 chr5 6240255 6240298 -193389852 - MIR SINE MIR -109 153 111 189 74 0 0 chr5 6240354 6240381 -193389769 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 201 196 0 0 chr5 6240697 6240743 -193389407 + (TA)n Simple_repeat Simple_repeat 2 47 0 5446 112 15 19 chr5 6241218 6242046 -193388104 + L1PA13 LINE L1 5333 6162 -1 263 136 0 0 chr5 6242087 6242131 -193388019 - L1MA9 LINE L1 -35 6277 6234 445 152 15 38 chr5 6242202 6242334 -193387816 + CT-rich Low_complexity Low_complexity 2 130 0 401 206 10 0 chr5 6242437 6242534 -193387616 + CT-rich Low_complexity Low_complexity 3 100 0 358 197 0 0 chr5 6242534 6242600 -193387550 - L1MA8 LINE L1 -130 6161 6096 2232 301 140 23 chr5 6244209 6245706 -193384444 + L2 LINE L2 1382 3107 -206 2799 116 3 11 chr5 6245706 6246084 -193384066 + THE1C LTR MaLR 1 375 0 2232 301 140 23 chr5 6246084 6246309 -193383841 + L2 LINE L2 3107 3304 -9 358 200 16 96 chr5 6246370 6246495 -193383655 - MIR SINE MIR -138 124 10 206 208 73 135 chr5 6246504 6246535 -193383615 - L2 LINE L2 -49 3223 3192 2069 201 87 9 chr5 6246535 6246959 -193383191 - MSTB2 LTR MaLR 0 457 1 206 208 73 135 chr5 6246959 6247023 -193383127 - L2 LINE L2 -80 3192 3134 1752 247 49 27 chr5 6247258 6247747 -193382403 - MLT1D LTR MaLR 0 505 6 208 174 0 22 chr5 6248058 6248104 -193382046 + T-rich Low_complexity Low_complexity 3 47 0 2320 60 0 0 chr5 6248824 6249172 -193380978 - AluY SINE Alu 0 348 1 2278 107 0 0 chr5 6249242 6249541 -193380609 - AluY SINE Alu -12 299 1 208 282 212 33 chr5 6249566 6249807 -193380343 - L2 LINE L2 -529 2785 2502 26 93 0 0 chr5 6250477 6250552 -193379598 + AT_rich Low_complexity Low_complexity 1 75 0 1605 179 14 0 chr5 6250983 6251297 -193378853 - AluJb SINE Alu 0 318 1 276 404 45 0 chr5 6251521 6251744 -193378406 + ERVL LTR ERVL 4467 4699 -1065 1232 278 65 15 chr5 6252662 6253065 -193377085 + LTR16A LTR ERVL 25 447 -3 2046 128 24 40 chr5 6253807 6254181 -193375969 - THE1C LTR MaLR 0 375 8 14238 128 6 4 chr5 6254796 6257689 -193372461 - L1PA8A LINE L1 -6 6440 3544 776 150 13 0 chr5 6257800 6257953 -193372197 - L1PA8A LINE L1 -2962 3499 3345 * 6057 172 13 40 chr5 6257938 6259831 -193370319 - L1PA8A LINE L1 -4290 2171 259 763 198 16 101 chr5 6260065 6260313 -193369837 + LTR12 LTR ERV1 238 464 -250 1615 104 3 97 chr5 6260342 6260630 -193369520 - L1PA8A LINE L1 -5613 262 2 189 215 62 62 chr5 6261387 6261452 -193368698 - MIR SINE MIR -88 174 110 801 215 34 10 chr5 6261778 6261983 -193368167 - MLT1C LTR MaLR -251 216 7 22 35 0 0 chr5 6262898 6262927 -193367223 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 6263377 6263398 -193366752 + AT_rich Low_complexity Low_complexity 1 21 0 2034 147 3 3 chr5 6264564 6264864 -193365286 + AluJb SINE Alu 4 303 -9 2283 95 10 0 chr5 6266633 6266937 -193363213 + AluSp SINE Alu 1 307 -6 307 319 93 30 chr5 6267616 6267886 -193362264 + L3 LINE CR1 863 1149 -428 324 294 81 48 chr5 6268593 6268989 -193361161 + L2 LINE L2 2734 3139 -174 2247 105 0 25 chr5 6269491 6269805 -193360345 - AluSg SINE Alu -4 306 1 22 0 0 0 chr5 6270286 6270308 -193359842 + AT_rich Low_complexity Low_complexity 1 22 0 327 203 0 0 chr5 6271884 6271953 -193358197 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 839 217 94 39 chr5 6272282 6272703 -193357447 - MLT1D LTR MaLR -4 501 21 1472 110 24 89 chr5 6273000 6273246 -193356904 - MER30 DNA MER1_type 0 230 1 1443 140 0 0 chr5 6273875 6274089 -193356061 + AluSg/x SINE Alu 84 297 -15 229 203 29 14 chr5 6274914 6274983 -193355167 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 562 310 125 48 chr5 6275979 6276649 -193353501 - L2 LINE L2 -30 3283 2567 2347 144 68 13 chr5 6277374 6277770 -193352380 - MSTB LTR MaLR 0 426 9 849 262 90 54 chr5 6277792 6278406 -193351744 + L1MEc LINE L1 827 1462 -4934 350 109 0 0 chr5 6278423 6278478 -193351672 + L1MA3 LINE L1 6250 6304 -1 346 226 19 19 chr5 6278640 6278746 -193351404 + L1M4 LINE L1 4802 4907 -1239 * 4685 208 32 23 chr5 6278737 6279152 -193350998 - L1MA10 LINE L1 0 6334 5924 2448 140 11 21 chr5 6279152 6279531 -193350619 - THE1C LTR MaLR 0 375 1 10170 125 12 73 chr5 6279531 6281212 -193348938 - THE1C-int LTR MaLR 0 1580 1 2195 174 13 16 chr5 6281217 6281591 -193348559 - THE1C LTR MaLR 0 375 3 4685 208 32 23 chr5 6281591 6283041 -193347109 - L1MA10 LINE L1 -413 5921 4438 1160 243 117 23 chr5 6283044 6283412 -193346738 + MSTD LTR MaLR 1 396 0 2383 192 17 28 chr5 6283419 6284345 -193345805 - L1PA7 LINE L1 -1031 5115 3757 * 6085 61 16 0 chr5 6284341 6285274 -193344876 + L1PA7 LINE L1 5092 6039 -115 1895 171 39 15 chr5 6285277 6285611 -193344539 + THE1B LTR MaLR 23 364 0 10762 106 24 35 chr5 6285612 6286111 -193344039 + THE1B-int LTR MaLR 2 505 -1075 2734 82 14 6 chr5 6286111 6286464 -193343686 + L1PA8A LINE L1 5776 6131 0 10762 106 24 35 chr5 6286464 6287560 -193342590 + THE1B-int LTR MaLR 505 1580 0 2080 144 57 28 chr5 6287560 6287914 -193342236 + THE1B LTR MaLR 1 364 0 408 272 159 46 chr5 6287920 6288203 -193341947 + L1M4 LINE L1 5046 5360 -786 254 218 0 0 chr5 6288205 6288260 -193341890 + L1MB7 LINE L1 2409 2463 -3921 5287 161 48 25 chr5 6288316 6289430 -193340720 + L1MA7 LINE L1 5153 6291 0 1721 221 28 101 chr5 6289439 6289697 -193340453 + L1MB7 LINE L1 4776 5051 -1331 306 87 0 0 chr5 6289697 6289743 -193340407 + (TA)n Simple_repeat Simple_repeat 2 47 0 1721 221 28 101 chr5 6289743 6290155 -193339995 + L1MB7 LINE L1 5051 5397 -985 3310 243 50 9 chr5 6290270 6291210 -193338940 + L1MB7 LINE L1 5432 6411 -9 428 0 19 0 chr5 6292017 6292069 -193338081 + (TG)n Simple_repeat Simple_repeat 2 54 0 221 309 37 0 chr5 6292775 6292856 -193337294 + L3 LINE CR1 1492 1575 -2 1416 230 69 34 chr5 6292930 6293372 -193336778 + MER31B LTR ERV1 3 657 -4 1047 213 58 5 chr5 6293372 6293525 -193336625 + MER20 DNA MER1_type 2 170 -49 234 62 0 0 chr5 6293525 6293557 -193336593 + (CA)n Simple_repeat Simple_repeat 1 32 0 1047 213 58 5 chr5 6293557 6293610 -193336540 + MER20 DNA MER1_type 170 219 0 358 252 106 31 chr5 6293786 6294047 -193336103 - MLT1J2 LTR MaLR -10 436 152 310 271 115 78 chr5 6295051 6295320 -193334830 - MLT1J2 LTR MaLR -65 385 107 1634 149 112 6 chr5 6295355 6295677 -193334473 - LTR18B LTR ERVL 0 614 259 1381 101 11 0 chr5 6295897 6296086 -193334064 - LTR18B LTR ERVL -423 191 1 270 292 42 0 chr5 6296086 6296177 -193333973 - MLT1J1 LTR MaLR -343 103 9 989 257 159 0 chr5 6297996 6298253 -193331897 - MER77 LTR ERV1 0 605 308 1064 232 62 77 chr5 6298371 6298707 -193331443 - MER77 LTR ERV1 -253 352 22 207 0 0 0 chr5 6299265 6299288 -193330862 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1762 158 36 4 chr5 6299560 6299839 -193330311 + AluJo SINE Alu 6 293 -19 1091 213 126 60 chr5 6300722 6300761 -193329389 - MLT2B1 LTR ERVL -1 413 378 255 61 0 0 chr5 6300761 6300794 -193329356 + (TG)n Simple_repeat Simple_repeat 1 33 0 1091 213 126 60 chr5 6300794 6301183 -193328967 - MLT2B1 LTR ERVL -36 378 1 264 312 8 48 chr5 6301965 6302090 -193328060 - L2 LINE L2 -13 3300 3181 528 265 139 0 chr5 6303665 6303831 -193326319 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr5 6304056 6304084 -193326066 + AT_rich Low_complexity Low_complexity 1 28 0 765 300 76 103 chr5 6305306 6305978 -193324172 + L3 LINE CR1 36 684 -893 5617 147 14 3 chr5 6305978 6307199 -193322951 + L1PA15 LINE L1 4933 6161 -4 765 300 76 103 chr5 6307199 6307339 -193322811 + L3 LINE CR1 684 826 -751 2408 161 48 22 chr5 6307402 6307819 -193322331 - MSTA LTR MaLR 0 428 1 332 285 46 39 chr5 6308154 6308284 -193321866 + L3 LINE CR1 1426 1556 -21 282 29 0 0 chr5 6308340 6308375 -193321775 + (CA)n Simple_repeat Simple_repeat 1 35 0 434 278 6 17 chr5 6311670 6311850 -193318300 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 210 333 7 20 chr5 6312246 6312396 -193317754 + (CATATA)n Simple_repeat Simple_repeat 3 150 0 275 29 0 0 chr5 6313561 6313596 -193316554 + L1PA6 LINE L1 6111 6145 -9 1983 145 0 23 chr5 6313628 6313932 -193316218 - AluSx SINE Alu -15 297 1 191 310 17 0 chr5 6314171 6314229 -193315921 + L2 LINE L2 3214 3272 0 1491 139 31 5 chr5 6314943 6315166 -193314984 + MER30 DNA MER1_type 2 230 0 180 273 0 0 chr5 6315921 6315987 -193314163 + CT-rich Low_complexity Low_complexity 4 69 0 199 361 48 30 chr5 6316315 6316481 -193313669 - L2 LINE L2 -428 2886 2718 246 326 181 7 chr5 6316483 6316621 -193313529 + L2 LINE L2 3152 3313 0 332 351 89 0 chr5 6317347 6317515 -193312635 + MIR SINE MIR 8 190 -72 208 315 126 16 chr5 6318000 6318127 -193312023 - MIR SINE MIR -59 203 63 339 285 164 15 chr5 6319060 6319234 -193310916 + MIR SINE MIR 45 241 -21 2117 104 0 44 chr5 6319389 6319707 -193310443 - AluSx SINE Alu -8 304 1 9362 238 84 22 chr5 6319826 6324631 -193305519 - L1MC3 LINE L1 -14 7771 2638 2144 139 7 3 chr5 6324631 6324941 -193305209 + AluSx SINE Alu 1 311 -1 9362 238 84 22 chr5 6324941 6325162 -193304988 - L1MC3 LINE L1 -5147 2638 2432 1282 260 100 91 chr5 6325195 6325575 -193304575 + MLT1E2 LTR MaLR 1 392 -234 1009 203 124 95 chr5 6325575 6326028 -193304122 + MER31B LTR ERV1 1 466 0 1282 260 100 91 chr5 6326028 6326155 -193303995 + MLT1E2 LTR MaLR 392 516 -110 213 39 0 0 chr5 6328442 6328468 -193301682 + (TG)n Simple_repeat Simple_repeat 2 27 0 507 173 9 27 chr5 6329445 6329555 -193300595 + MER67D LTR ERV1 1 108 -406 344 188 25 12 chr5 6329590 6329670 -193300480 + MER67D LTR ERV1 430 510 -4 2299 154 35 31 chr5 6330098 6330647 -193299503 + MLT2A2 LTR ERVL 1 554 0 225 0 0 0 chr5 6331551 6331576 -193298574 + (TC)n Simple_repeat Simple_repeat 2 26 0 1784 148 6 35 chr5 6332332 6332643 -193297507 + AluJb SINE Alu 1 302 -10 26 30 0 0 chr5 6332708 6332741 -193297409 + AT_rich Low_complexity Low_complexity 1 33 0 2182 110 0 26 chr5 6333033 6333342 -193296808 - AluSq SINE Alu -12 301 1 445 228 33 0 chr5 6334629 6334721 -193295429 - MLT1B LTR MaLR -32 358 264 1251 208 82 38 chr5 6334725 6335091 -193295059 + MLT1B LTR MaLR 6 387 -3 2479 63 0 3 chr5 6335879 6336178 -193293972 + AluY SINE Alu 1 298 -13 190 337 36 0 chr5 6339438 6339521 -193290629 + MIR SINE MIR 75 160 -102 260 229 18 119 chr5 6339610 6339719 -193290431 - MIR SINE MIR -7 255 158 831 115 0 65 chr5 6339719 6339858 -193290292 - AluSg/x SINE Alu -2 310 181 180 0 0 0 chr5 6339858 6339878 -193290272 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 254 323 43 0 chr5 6339886 6339979 -193290171 - MIR SINE MIR -110 152 56 297 253 20 67 chr5 6340244 6340398 -193289752 + MIR SINE MIR 87 238 -24 1195 244 177 9 chr5 6341990 6342454 -193287696 + MER74A LTR ERVL 1 542 -16 1519 126 13 4 chr5 6342938 6343176 -193286974 + L1MA2 LINE L1 6065 6304 0 201 39 0 0 chr5 6344130 6344156 -193285994 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2507 76 0 0 chr5 6345022 6345324 -193284826 + AluSc SINE Alu 1 302 -7 2145 126 0 3 chr5 6345644 6345945 -193284205 + AluSx SINE Alu 1 300 -12 744 273 10 10 chr5 6346042 6346251 -193283899 - LTR40a LTR ERVL -303 216 8 1475 178 7 40 chr5 6349844 6350147 -193280003 - L1MA7 LINE L1 -410 5881 5589 1903 180 35 20 chr5 6350147 6350544 -193279606 + L1MA7 LINE L1 5883 6288 -3 745 145 26 0 chr5 6350565 6350682 -193279468 + FRAM SINE Alu 37 156 -20 3168 198 20 37 chr5 6351331 6351576 -193278574 - L1MA9 LINE L1 -35 6277 6030 2335 99 0 0 chr5 6351576 6351869 -193278281 - AluSg1 SINE Alu -16 293 1 3168 198 20 37 chr5 6351869 6352360 -193277790 - L1MA9 LINE L1 -282 6030 5553 2857 195 90 12 chr5 6352356 6352701 -193277449 + L1M2 LINE L1 4589 4906 -1398 * 189 0 0 0 chr5 6352701 6352722 -193277428 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2857 195 90 12 chr5 6352722 6353293 -193276857 + L1M2 LINE L1 4906 5561 -743 27 0 0 0 chr5 6353395 6353422 -193276728 + AT_rich Low_complexity Low_complexity 1 27 0 280 301 19 0 chr5 6353560 6353663 -193276487 - L1ME3A LINE L1 -227 5943 5839 240 207 81 23 chr5 6353819 6353906 -193276244 + L1MC4 LINE L1 6612 6703 -1339 238 102 0 41 chr5 6353917 6353966 -193276184 + (TA)n Simple_repeat Simple_repeat 2 48 0 776 230 95 24 chr5 6354123 6354492 -193275658 - L1MC5 LINE L1 -225 7736 7342 245 206 24 40 chr5 6354497 6354538 -193275612 + (CATATA)n Simple_repeat Simple_repeat 6 46 -83 2075 148 52 56 chr5 6354538 6354985 -193275165 + MER65A LTR ERV1 1 445 0 245 206 24 40 chr5 6354985 6355069 -193275081 + (CATATA)n Simple_repeat Simple_repeat 46 129 0 1945 195 32 17 chr5 6355286 6355696 -193274454 + MLT2C2 LTR ERVL 1 416 -48 243 164 0 0 chr5 6355712 6355773 -193274377 + (CA)n Simple_repeat Simple_repeat 2 62 0 195 42 0 0 chr5 6355807 6355831 -193274319 + (TA)n Simple_repeat Simple_repeat 2 25 0 273 208 0 62 chr5 6355848 6355944 -193274206 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr5 6355944 6355968 -193274182 + (GA)n Simple_repeat Simple_repeat 2 25 0 245 139 93 0 chr5 6355986 6356029 -193274121 + MLT2C2 LTR ERVL 472 518 -2 255 299 17 26 chr5 6357208 6357325 -193272825 + MIR SINE MIR 97 212 -50 1147 207 29 0 chr5 6357407 6357615 -193272535 + MER20 DNA MER1_type 6 219 0 8619 48 0 0 chr5 6359831 6360800 -193269350 - LTR5 LTR ERVK 0 969 1 1702 198 91 82 chr5 6361387 6361902 -193268248 - MLT2B1 LTR ERVL 0 520 1 369 352 44 57 chr5 6463400 6463784 -193166366 - L2 LINE L2 0 3272 2894 539 217 95 13 chr5 6464130 6464285 -193165865 - L1MD3 LINE L1 0 8040 7881 356 303 192 4 chr5 6464278 6464512 -193165638 - L1MC4 LINE L1 -191 7851 7574 * 418 207 36 45 chr5 6464545 6464590 -193165560 + MER20 DNA MER1_type 31 75 -144 2712 183 74 13 chr5 6464590 6465119 -193165031 - MER68 LTR ERV1 -1 561 1 418 207 36 45 chr5 6465119 6465184 -193164966 + MER20 DNA MER1_type 75 140 -79 1786 179 0 16 chr5 6465754 6466067 -193164083 + AluJo SINE Alu 3 310 -2 181 109 43 0 chr5 6466475 6466521 -193163629 + T-rich Low_complexity Low_complexity 3 50 0 819 254 96 35 chr5 6468991 6469467 -193160683 + MER110A LTR ERV1 1 486 0 1796 196 78 43 chr5 6469661 6470145 -193160005 + MLT1D LTR MaLR 2 502 -3 389 272 0 26 chr5 6470184 6470298 -193159852 + MIR SINE MIR 152 262 0 1818 166 103 70 chr5 6470827 6471273 -193158877 - MLT2C2 LTR ERVL 0 464 4 1768 185 0 3 chr5 6471406 6471714 -193158436 - AluJo SINE Alu -5 307 1 302 273 96 81 chr5 6474083 6474343 -193155807 - ERVL LTR ERVL -5148 616 353 703 153 14 49 chr5 6474663 6474807 -193155343 + L1MA7 LINE L1 5878 6016 -275 1360 126 18 22 chr5 6474807 6475027 -193155123 + L1PB4 LINE L1 5928 6149 -7 1248 178 36 14 chr5 6475027 6475298 -193154852 + L1MA7 LINE L1 6008 6288 -3 2376 97 3 0 chr5 6476162 6476460 -193153690 - AluSp SINE Alu -14 299 1 1015 169 0 0 chr5 6476510 6476658 -193153492 - AluJb SINE Alu -33 279 132 254 291 39 39 chr5 6476860 6476987 -193153163 + L2 LINE L2 3186 3312 -1 554 236 152 90 chr5 6477241 6477576 -193152574 + LTR18A LTR ERVL 1 356 -1 249 318 111 35 chr5 6477620 6477881 -193152269 + MLT1K LTR MaLR 99 379 -209 22 35 0 0 chr5 6478343 6478372 -193151778 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr5 6478415 6478438 -193151712 + (T)n Simple_repeat Simple_repeat 1 23 0 1097 211 126 38 chr5 6478603 6478673 -193151477 + MSTC LTR MaLR 10 72 -356 1936 149 3 31 chr5 6478673 6478995 -193151155 + AluSq SINE Alu 1 313 0 1097 211 126 38 chr5 6478995 6479241 -193150909 + MSTC LTR MaLR 72 354 -74 415 192 47 161 chr5 6479540 6479569 -193150581 - L1MD3 LINE L1 -168 5998 5967 791 194 6 6 chr5 6479569 6479734 -193150416 - L1MA10 LINE L1 0 6334 6170 415 192 47 161 chr5 6479734 6480130 -193150020 - L1MD3 LINE L1 -199 5967 5697 2099 142 3 0 chr5 6480130 6480426 -193149724 - AluSx SINE Alu -15 297 1 415 192 47 161 chr5 6480426 6480519 -193149631 - L1MD3 LINE L1 -469 5697 5595 6832 74 8 4 chr5 6480519 6482434 -193147716 + L1PA8 LINE L1 4310 6163 -9 615 200 100 6 chr5 6482476 6482636 -193147514 + L1ME LINE L1 5406 5580 -586 228 350 77 0 chr5 6482650 6482833 -193147317 + L2 LINE L2 2550 2746 -568 490 245 126 0 chr5 6485095 6485246 -193144904 + MER58C DNA MER1_type 46 215 0 312 127 0 0 chr5 6487229 6487284 -193142866 + (CGGGG)n Simple_repeat Simple_repeat 5 59 0 25 0 0 0 chr5 6487625 6487650 -193142500 + GC_rich Low_complexity Low_complexity 1 25 0 283 331 118 24 chr5 6488567 6488854 -193141296 - L2 LINE L2 -244 3069 2757 671 281 111 32 chr5 6489072 6489622 -193140528 - L2 LINE L2 -4 3309 2702 653 251 127 41 chr5 6489642 6489909 -193140241 + L2 LINE L2 2409 2698 -616 692 226 83 0 chr5 6489914 6490082 -193140068 - MER58B DNA MER1_type 0 341 160 2357 77 3 10 chr5 6490780 6491079 -193139071 + AluSg SINE Alu 1 297 -13 1384 140 26 0 chr5 6491481 6491709 -193138441 - MER50 LTR ERV1 -500 234 1 191 231 96 0 chr5 6491710 6491762 -193138388 + MIR3 SINE MIR 150 206 -2 462 18 0 0 chr5 6493788 6493843 -193136307 + (TG)n Simple_repeat Simple_repeat 2 56 0 1861 124 0 89 chr5 6495193 6495508 -193134642 + AluSx SINE Alu 26 312 0 2650 127 6 3 chr5 6495999 6496362 -193133788 + THE1B LTR MaLR 1 364 0 893 189 39 149 chr5 6497185 6497963 -193132187 + MER4C LTR ERV1 1 465 0 270 0 0 0 chr5 6499376 6499406 -193130744 + (CA)n Simple_repeat Simple_repeat 2 31 0 882 172 60 142 chr5 6500925 6501256 -193128894 + MLT1A1 LTR MaLR 20 323 -42 193 286 0 16 chr5 6501579 6501642 -193128508 + L2 LINE L2 2979 3040 -232 789 238 14 43 chr5 6501806 6502016 -193128134 + MER3 DNA MER1_type 6 209 0 360 321 42 31 chr5 6502418 6502611 -193127539 - L2 LINE L2 -497 2817 2623 2070 191 116 63 chr5 6504507 6505095 -193125055 + MLT1E3 LTR MaLR 1 619 -5 314 232 0 43 chr5 6505533 6505602 -193124548 - MER103 DNA DNA -78 88 23 257 282 64 18 chr5 6506153 6506263 -193123887 + L1M4 LINE L1 4741 4855 -1291 319 239 95 23 chr5 6506547 6506799 -193123351 + L1M1 LINE L1 5192 5479 -701 478 237 8 8 chr5 6507205 6507323 -193122827 + LTR37B LTR ERV1 351 468 0 2511 76 0 3 chr5 6507430 6507734 -193122416 + AluY SINE Alu 1 303 -8 910 237 28 14 chr5 6507800 6508015 -193122135 + MER20 DNA MER1_type 1 218 -1 617 222 6 56 chr5 6509537 6509699 -193120451 - MER20 DNA MER1_type -6 213 60 925 253 177 59 chr5 6510117 6510383 -193119767 + MLT1E LTR MaLR 25 258 -335 2215 117 40 69 chr5 6510383 6510758 -193119392 + THE1B LTR MaLR 1 364 0 925 253 177 59 chr5 6510758 6511000 -193119150 + MLT1E LTR MaLR 258 593 0 1129 262 26 12 chr5 6511150 6511493 -193118657 + MER90 LTR ERV1 29 376 -199 2040 163 46 37 chr5 6511500 6512054 -193118096 - MLT2A2 LTR ERVL 0 554 1 432 266 35 74 chr5 6512055 6512258 -193117892 + MER90 LTR ERV1 420 614 0 236 305 81 29 chr5 6513535 6513709 -193116441 + L1MEd LINE L1 999 1181 -4938 362 248 218 34 chr5 6514241 6514475 -193115675 - HAL1 LINE L1 -196 2311 2035 450 295 8 76 chr5 6514503 6514740 -193115410 - MIR SINE MIR -15 247 27 549 264 80 41 chr5 6515072 6515636 -193114514 - HAL1 LINE L1 -799 1708 1091 2848 193 72 23 chr5 6515640 6516325 -193113825 - L1MB7 LINE L1 -8 6176 5459 909 294 178 12 chr5 6516568 6517140 -193113010 - HAL1 LINE L1 -1727 780 114 775 146 33 33 chr5 6517243 6517394 -193112756 - MLT1C LTR MaLR -316 151 1 514 301 115 27 chr5 6517527 6518042 -193112108 + L1M4 LINE L1 3706 4265 -1881 330 278 124 43 chr5 6518379 6518588 -193111562 - L1MB7 LINE L1 -2267 5541 5316 242 287 101 23 chr5 6518615 6518744 -193111406 + L1ME LINE L1 5619 5757 -413 2198 103 40 0 chr5 6519277 6519577 -193110573 - AluSx SINE Alu 0 312 1 2423 102 30 24 chr5 6521599 6521972 -193108178 - THE1C LTR MaLR 0 375 1 186 138 35 0 chr5 6522853 6522882 -193107268 - L2 LINE L2 -100 3213 3184 303 180 0 0 chr5 6524153 6524203 -193105947 + Alu SINE Alu 1 50 -252 31 44 0 0 chr5 6524242 6524287 -193105863 + AT_rich Low_complexity Low_complexity 1 45 0 1040 150 0 72 chr5 6524346 6524539 -193105611 + AluJb SINE Alu 131 309 -3 221 328 90 25 chr5 6526116 6526238 -193103912 + MIR SINE MIR 23 152 -110 345 296 96 7 chr5 6526955 6527090 -193103060 + MIR SINE MIR 65 211 -51 203 302 47 0 chr5 6527121 6527227 -193102923 + (TATG)n Simple_repeat Simple_repeat 4 114 0 27 51 0 17 chr5 6528997 6529036 -193101114 + AT_rich Low_complexity Low_complexity 1 40 -18 1736 149 73 3 chr5 6529036 6529325 -193100825 - AluSx SINE Alu -3 309 1 27 51 0 17 chr5 6529325 6529344 -193100806 + AT_rich Low_complexity Low_complexity 40 58 0 1951 102 60 11 chr5 6529347 6529630 -193100520 - AluSx SINE Alu -15 297 1 1462 177 85 0 chr5 6529636 6529907 -193100243 - AluJo SINE Alu -18 294 1 1590 162 40 7 chr5 6529917 6530189 -193099961 - AluJb SINE Alu -23 289 9 25 31 0 0 chr5 6531803 6531835 -193098315 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 6532353 6532381 -193097769 + AT_rich Low_complexity Low_complexity 1 28 0 449 208 0 0 chr5 6633333 6633410 -192996740 + AluJb SINE Alu 173 249 -63 1398 156 7 60 chr5 6633446 6633715 -192996435 - AluJo SINE Alu -57 255 1 234 70 0 70 chr5 6633715 6633758 -192996392 + MSTA LTR MaLR 389 428 0 474 303 65 31 chr5 6633758 6634019 -192996131 - MLT1F-int LTR MaLR -770 601 332 810 193 35 18 chr5 6634084 6634255 -192995895 + FRAM SINE Alu 1 171 -5 290 239 146 15 chr5 6634263 6634393 -192995757 - MLT1F-int LTR MaLR -1221 150 4 897 204 86 9 chr5 6634405 6634626 -192995524 - MLT1F LTR MaLR 0 542 305 287 153 0 125 chr5 6634656 6634716 -192995434 - MLT1F LTR MaLR -328 239 188 201 108 0 0 chr5 6634716 6634753 -192995397 + (CA)n Simple_repeat Simple_repeat 2 38 0 287 153 0 125 chr5 6634753 6634764 -192995386 - MLT1F LTR MaLR -379 188 177 2212 107 50 50 chr5 6634829 6634927 -192995223 + THE1B LTR MaLR 1 98 -266 2255 112 0 3 chr5 6634927 6635223 -192994927 - AluSq SINE Alu -18 295 1 2212 107 50 50 chr5 6635223 6635488 -192994662 + THE1B LTR MaLR 97 364 0 375 212 24 0 chr5 6636718 6636803 -192993347 + MIR3 SINE MIR 73 159 -49 200 205 0 0 chr5 6637196 6637235 -192992915 + (CAT)n Simple_repeat Simple_repeat 1 39 0 1893 122 0 11 chr5 6637992 6638254 -192991896 - AluSx SINE Alu -53 259 1 966 258 46 40 chr5 6638310 6638659 -192991491 + L3 LINE CR1 1071 1421 -156 201 244 0 0 chr5 6639454 6639499 -192990651 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 23 68 0 0 chr5 6639522 6639566 -192990584 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 6639632 6639655 -192990495 + AT_rich Low_complexity Low_complexity 1 23 0 404 325 41 0 chr5 6641581 6641750 -192988400 + MIR3 SINE MIR 33 208 0 718 112 0 90 chr5 6641779 6641913 -192988237 - AluSx SINE Alu 0 309 188 994 106 0 8 chr5 6641924 6642056 -192988094 - AluSx SINE Alu -176 137 7 1351 190 58 48 chr5 6642135 6642514 -192987636 - MLT1C LTR MaLR 0 467 85 292 304 0 0 chr5 6642859 6642938 -192987212 - MIR SINE MIR -75 187 109 290 281 57 62 chr5 6643059 6643269 -192986881 - MIR SINE MIR -43 219 11 1582 58 43 14 chr5 6644182 6644390 -192985760 - AluSq SINE Alu -21 292 79 216 93 37 19 chr5 6644530 6644584 -192985566 + A-rich Low_complexity Low_complexity 4 58 0 201 339 0 34 chr5 6644612 6644789 -192985361 + A-rich Low_complexity Low_complexity 2 172 0 433 294 17 17 chr5 6644838 6645018 -192985132 + GA-rich Low_complexity Low_complexity 1 180 0 741 78 0 0 chr5 6645320 6645410 -192984740 + THE1C LTR MaLR 1 90 -285 1412 171 89 0 chr5 6645421 6645679 -192984471 + MER50 LTR ERV1 431 711 -23 1737 176 0 31 chr5 6646153 6646471 -192983679 - AluJb SINE Alu -4 308 1 283 293 53 30 chr5 6646572 6646705 -192983445 - MLT1I LTR MaLR -52 357 222 1456 116 61 101 chr5 6646812 6646982 -192983168 - MER39B LTR ERV1 -1 652 500 1717 153 30 0 chr5 6646982 6647250 -192982900 - AluJo SINE Alu -25 287 12 1456 116 61 101 chr5 6647250 6647406 -192982744 - MER39B LTR ERV1 -153 500 339 2599 21 3 52 chr5 6647888 6648215 -192981935 + AluY SINE Alu 1 311 0 340 310 113 18 chr5 6648229 6648458 -192981692 + L1MEd LINE L1 508 758 -5361 489 174 12 0 chr5 6648587 6648673 -192981477 - HY1 scRNA scRNA -25 87 1 1367 181 43 37 chr5 6648733 6649032 -192981118 - AluJb SINE Alu -9 303 3 2354 89 7 3 chr5 6649065 6649368 -192980782 + AluSq SINE Alu 1 304 -9 393 242 82 62 chr5 6649540 6649734 -192980416 + L1MEd LINE L1 2878 3075 -3054 1725 203 15 3 chr5 6649743 6650068 -192980082 - MLT1A1 LTR MaLR -1 364 36 290 279 169 0 chr5 6650089 6650243 -192979907 + L1M4 LINE L1 4664 4843 -1303 675 256 77 25 chr5 6650245 6650530 -192979620 - L2 LINE L2 0 3313 3014 2057 125 0 10 chr5 6650651 6650946 -192979204 + AluSx SINE Alu 12 303 -9 267 284 108 7 chr5 6651022 6651161 -192978989 + MIR SINE MIR 16 164 -63 34 24 0 0 chr5 6651262 6651303 -192978847 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 6651825 6651859 -192978291 + AT_rich Low_complexity Low_complexity 1 34 0 2346 102 3 0 chr5 6652241 6652545 -192977605 - AluSc SINE Alu -4 305 1 302 33 7 7 chr5 6652784 6652835 -192977315 - MADE1 DNA Mariner 0 80 47 560 273 39 42 chr5 6652928 6653134 -192977016 - MIR SINE MIR -57 205 1 183 169 68 34 chr5 6653258 6653317 -192976833 - MIR SINE MIR -36 226 166 402 308 28 21 chr5 6654221 6654364 -192975786 - MIR3 SINE MIR -46 162 19 223 217 29 29 chr5 6654969 6655038 -192975112 + T-rich Low_complexity Low_complexity 4 72 0 2064 193 80 42 chr5 6656612 6657088 -192973062 + MER72 LTR ERV1 15 508 -214 1401 152 0 49 chr5 6657132 6657395 -192972755 + AluJo SINE Alu 37 286 -26 1446 157 0 4 chr5 6657416 6657646 -192972504 + MER72 LTR ERV1 494 722 0 708 162 0 0 chr5 6657693 6657792 -192972358 + AluJ/FLAM SINE Alu 2 100 -212 426 190 229 45 chr5 6657807 6657986 -192972164 - LTR37A LTR ERV1 -207 219 8 180 296 0 0 chr5 6658700 6658808 -192971342 + A-rich Low_complexity Low_complexity 1 108 0 2188 100 7 3 chr5 6660648 6660939 -192969211 - AluSx SINE Alu -20 292 1 182 273 18 18 chr5 6661414 6661469 -192968681 + MIR3 SINE MIR 10 64 -144 21 0 0 0 chr5 6661512 6661533 -192968617 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 6663144 6663167 -192966983 + AT_rich Low_complexity Low_complexity 1 23 0 1578 195 10 0 chr5 6664879 6665003 -192965147 + AluJb SINE Alu 3 124 -188 369 0 0 0 chr5 6665003 6665044 -192965106 + (CA)n Simple_repeat Simple_repeat 2 42 0 1578 195 10 0 chr5 6665044 6665211 -192964939 + AluJb SINE Alu 124 297 -15 2097 131 7 0 chr5 6665542 6665839 -192964311 + AluSx SINE Alu 2 300 -12 1918 119 0 48 chr5 6666230 6666541 -192963609 - AluSx SINE Alu -16 296 1 813 159 0 57 chr5 6666569 6666726 -192963424 - AluJo SINE Alu -154 158 11 211 267 0 0 chr5 6667538 6667583 -192962567 - L2 LINE L2 -8 3305 3261 208 234 0 21 chr5 6667659 6667706 -192962444 + CT-rich Low_complexity Low_complexity 3 48 0 666 232 53 2 chr5 6667727 6667885 -192962265 - MIR SINE MIR -44 164 2 411 298 68 12 chr5 6669002 6669163 -192960987 - MIR3 SINE MIR -1 207 38 1293 153 23 23 chr5 6669413 6669629 -192960521 + AluJb SINE Alu 1 216 -96 471 159 127 40 chr5 6669629 6669755 -192960395 + Charlie5 DNA MER1_type 2447 2583 -29 180 301 63 56 chr5 6669769 6669912 -192960238 - L2 LINE L2 -1321 1993 1850 2692 147 26 5 chr5 6671658 6672081 -192958069 + Tigger2a DNA MER2_type 2 433 -1 1996 145 3 20 chr5 6672494 6672797 -192957353 + AluJb SINE Alu 2 299 -13 403 153 0 0 chr5 6673960 6674019 -192956131 - Alu SINE Alu -16 296 238 2906 139 56 20 chr5 6674019 6674572 -192955578 + MER50 LTR ERV1 1 573 -161 2197 104 0 10 chr5 6674572 6674881 -192955269 - AluSx SINE Alu -6 306 1 1746 170 10 35 chr5 6675174 6675486 -192954664 - AluJb SINE Alu -8 304 1 652 154 0 0 chr5 6675918 6676022 -192954128 + AluJb SINE Alu 202 305 -7 631 115 0 21 chr5 6676537 6676633 -192953517 - FLAM_C SINE Alu -6 137 44 858 226 0 6 chr5 6678199 6678363 -192951787 + MER45A DNA AcHobo 1 163 -15 536 169 22 88 chr5 6680394 6680530 -192949620 + L2 LINE L2 2731 2857 -457 1737 93 115 33 chr5 6680533 6680803 -192949347 + LTR9 LTR ERV1 1 292 -320 1644 105 4 13 chr5 6680803 6681032 -192949118 - AluSx SINE Alu -85 227 1 668 188 150 0 chr5 6681032 6681165 -192948985 + MER2 DNA MER2_type 193 345 0 2001 129 3 7 chr5 6681190 6681477 -192948673 - AluSx SINE Alu -26 286 1 199 77 26 26 chr5 6682622 6682661 -192947489 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr5 6683305 6683327 -192946823 + AT_rich Low_complexity Low_complexity 1 22 0 255 316 40 0 chr5 6684642 6684718 -192945432 - MIR SINE MIR -100 108 30 1462 221 4 0 chr5 6685416 6685692 -192944458 + AluJo SINE Alu 22 298 -14 335 367 190 29 chr5 6686934 6687245 -192942905 + L2 LINE L2 2910 3270 -2 457 314 88 10 chr5 6687422 6687616 -192942534 + MIR SINE MIR 1 209 -53 390 208 94 10 chr5 6687693 6687789 -192942361 - L1MC2 LINE L1 -29 6315 6212 1844 144 39 10 chr5 6687832 6688138 -192942012 - MER2 DNA MER2_type 0 345 31 200 33 0 33 chr5 6691589 6691619 -192938531 + (CA)n Simple_repeat Simple_repeat 1 29 0 216 0 0 0 chr5 6694136 6694160 -192935990 + (A)n Simple_repeat Simple_repeat 1 24 0 2073 93 4 0 chr5 6694827 6695097 -192935053 + L1PA8 LINE L1 5902 6172 0 591 287 79 14 chr5 6697508 6697724 -192932426 - MIR SINE MIR -1 261 32 578 203 8 8 chr5 6698695 6698813 -192931337 + L2 LINE L2 2680 2797 -517 289 210 37 0 chr5 6698849 6698930 -192931220 + (TA)n Simple_repeat Simple_repeat 2 85 0 436 81 0 40 chr5 6698947 6699021 -192931129 + MADE1 DNA Mariner 10 80 0 583 307 58 19 chr5 6699046 6699251 -192930899 + L2 LINE L2 2851 3063 -250 1673 134 0 0 chr5 6699582 6699814 -192930336 - AluSx SINE Alu -80 232 1 2155 116 0 0 chr5 6700355 6700649 -192929501 - AluSx SINE Alu -18 294 1 1684 180 3 10 chr5 6700798 6701093 -192929057 - AluJo SINE Alu -19 293 1 2288 96 0 0 chr5 6701457 6701750 -192928400 + AluSx SINE Alu 1 293 -19 1901 152 13 3 chr5 6702080 6702383 -192927767 + AluJb SINE Alu 1 306 -6 2368 84 0 3 chr5 6702391 6702687 -192927463 + AluSg SINE Alu 3 297 -13 315 313 61 0 chr5 6705459 6705558 -192924592 + L2 LINE L2 3159 3263 -9 1435 198 55 32 chr5 6706905 6707253 -192922897 + MLT1A2 LTR MaLR 1 356 -18 270 194 0 0 chr5 6709865 6709927 -192920223 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 4757 70 20 2 chr5 6709986 6710598 -192919552 + L1PA8A LINE L1 5482 6104 -27 1722 153 10 27 chr5 6710714 6711008 -192919142 + AluJb SINE Alu 1 289 -23 215 40 60 20 chr5 6712125 6712175 -192917975 + (CA)n Simple_repeat Simple_repeat 2 53 0 189 0 0 0 chr5 6713137 6713158 -192916992 + (A)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr5 6713965 6713997 -192916153 + (A)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr5 6716012 6716048 -192914102 + AT_rich Low_complexity Low_complexity 1 36 0 1570 199 14 0 chr5 6716048 6716334 -192913816 - AluJo SINE Alu -22 290 1 2221 146 37 0 chr5 6717241 6717590 -192912560 + MER47A DNA MER2_type 5 366 0 1854 169 3 13 chr5 6717794 6717976 -192912174 - AluJo SINE Alu -1 311 132 2254 105 7 0 chr5 6717976 6718272 -192911878 - AluSg SINE Alu -12 298 1 1854 169 3 13 chr5 6718272 6718403 -192911747 - AluJo SINE Alu -180 132 1 2207 125 0 3 chr5 6718491 6718796 -192911354 - AluJb SINE Alu 0 312 9 243 232 295 11 chr5 6718876 6718971 -192911179 - MIR SINE MIR -55 153 32 1396 112 66 2 chr5 6719967 6720203 -192909947 + L1PB3 LINE L1 5663 5908 -246 182 279 127 0 chr5 6720335 6720414 -192909736 - MIR SINE MIR -130 132 44 2362 108 0 13 chr5 6721322 6721638 -192908512 + AluSx SINE Alu 1 312 0 1127 209 158 73 chr5 6724008 6724515 -192905635 - MLT1F1 LTR MaLR -23 544 1 2226 106 7 3 chr5 6727373 6727674 -192902476 - AluSq SINE Alu -11 302 1 452 314 64 29 chr5 6727745 6727949 -192902201 + Charlie8 DNA MER1_type 4 214 -2203 474 18 0 0 chr5 6729849 6729904 -192900246 + (TA)n Simple_repeat Simple_repeat 1 55 0 2274 89 0 7 chr5 6729904 6730196 -192899954 - AluSq SINE Alu -21 292 3 960 184 128 28 chr5 6730200 6730450 -192899700 + MSTB1 LTR MaLR 156 430 -2 351 141 109 0 chr5 6731232 6731296 -192898854 - MER50 LTR ERV1 -663 71 1 275 238 60 24 chr5 6731889 6731973 -192898177 + MLT1L LTR MaLR 527 613 -2 2944 101 0 5 chr5 6732159 6732536 -192897614 - THE1C LTR MaLR 0 375 1 954 216 96 96 chr5 6733068 6733536 -192896614 - LTR34 LTR ERV1 -4 695 136 425 180 72 18 chr5 6733614 6733725 -192896425 - MER4A LTR ERV1 -547 117 1 353 261 45 9 chr5 6733827 6733938 -192896212 + Charlie5 DNA MER1_type 34 148 -2464 2256 99 10 0 chr5 6733940 6734242 -192895908 + AluSx SINE Alu 1 305 -7 2418 183 56 42 chr5 6734248 6734603 -192895547 + Charlie5 DNA MER1_type 1975 2343 -281 2163 126 10 0 chr5 6734603 6734905 -192895245 - AluSx SINE Alu -7 305 1 2418 183 56 42 chr5 6734905 6735161 -192894989 + Charlie5 DNA MER1_type 2343 2594 -30 223 217 0 0 chr5 6735645 6735691 -192894459 - MIR SINE MIR -115 147 102 4795 161 48 9 chr5 6735695 6736557 -192893593 - MER54A LTR ERVL -6 895 1 729 234 52 16 chr5 6740639 6740831 -192889319 - MER113 DNA MER1_type? -54 467 269 472 220 43 14 chr5 6740887 6741028 -192889122 - MER113 DNA MER1_type? -371 150 6 21 0 0 0 chr5 6742293 6742314 -192887836 + AT_rich Low_complexity Low_complexity 1 21 0 2102 98 3 10 chr5 6742497 6742792 -192887358 + AluSq SINE Alu 2 294 -19 309 51 0 0 chr5 6744123 6744162 -192885988 + (T)n Simple_repeat Simple_repeat 1 39 0 594 217 14 29 chr5 6744162 6744300 -192885850 + MIR SINE MIR 18 153 -109 890 239 71 0 chr5 6748267 6748496 -192881654 - MIR SINE MIR -10 252 8 2103 112 10 0 chr5 6749538 6749842 -192880308 - AluSx SINE Alu -1 311 5 528 168 84 8 chr5 6749944 6750075 -192880075 + LTR37A LTR ERV1 286 426 0 273 302 9 35 chr5 6750336 6750452 -192879698 + G-rich Low_complexity Low_complexity 3 115 0 444 259 5 53 chr5 6751827 6752016 -192878134 + GA-rich Low_complexity Low_complexity 1 180 0 873 163 7 13 chr5 6752167 6752363 -192877787 - FRAM SINE Alu 0 176 1 2179 105 0 22 chr5 6752368 6752683 -192877467 - AluSx SINE Alu -4 308 1 482 208 10 10 chr5 6752810 6752906 -192877244 - MLT2F LTR ERVL -567 96 1 1287 131 149 62 chr5 6752948 6753244 -192876906 + MLT1A1 LTR MaLR 1 332 -33 1957 121 0 0 chr5 6753244 6753560 -192876590 - AluSx SINE Alu 0 316 1 1287 131 149 62 chr5 6753560 6753598 -192876552 + MLT1A1 LTR MaLR 332 365 0 1079 134 31 76 chr5 6753803 6754026 -192876124 - AluJb SINE Alu -14 298 86 363 248 35 91 chr5 6754755 6754899 -192875251 - L1MC4 LINE L1 0 8042 7806 311 266 215 63 chr5 6755384 6755700 -192874450 + L2 LINE L2 2909 3272 0 414 267 82 30 chr5 6755944 6756079 -192874071 + L2 LINE L2 3123 3264 -8 1881 127 3 7 chr5 6756916 6757208 -192872942 - AluSg SINE Alu -19 291 1 1916 137 10 0 chr5 6757395 6757688 -192872462 - AluSx SINE Alu -16 296 1 2510 186 21 13 chr5 6757992 6758460 -192871690 + MER70A LTR ERVL 1 472 0 552 239 0 0 chr5 6758467 6758612 -192871538 - FLAM_A SINE Alu 0 145 1 186 133 0 0 chr5 6759519 6759549 -192870601 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2060 101 4 0 chr5 6759549 6759826 -192870324 - AluSq SINE Alu -33 280 3 322 286 60 65 chr5 6759931 6760062 -192870088 + L1MC4a LINE L1 6056 6187 -1621 2010 117 0 7 chr5 6760062 6760352 -192869798 - AluSx SINE Alu -24 288 1 322 286 60 65 chr5 6760352 6760388 -192869762 + L1MC4a LINE L1 6187 6222 -1586 2142 79 21 0 chr5 6760934 6761224 -192868926 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr5 6761751 6761772 -192868378 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 655 244 77 0 chr5 6762034 6762202 -192867948 - MIR SINE MIR -71 191 11 3888 141 106 83 chr5 6762281 6763310 -192866840 + pTR5 LTR ERV1 742 2025 -413 410 185 34 27 chr5 6763310 6763421 -192866729 + LTR30 LTR ERV1 375 642 -80 2199 115 3 0 chr5 6763421 6763734 -192866416 + pTR5 LTR ERV1 79 392 -2046 181 351 54 27 chr5 6763785 6763896 -192866254 - L2 LINE L2 0 3313 3200 2044 92 28 57 chr5 6764265 6764582 -192865568 + AluSq SINE Alu 6 313 0 1754 164 28 104 chr5 6765886 6766143 -192864007 - MER45B DNA AcHobo -543 1038 832 2177 97 0 0 chr5 6766143 6766431 -192863719 - AluSx SINE Alu -24 288 1 1754 164 28 104 chr5 6766431 6766642 -192863508 - MER45B DNA AcHobo -749 832 606 1243 256 93 0 chr5 6766660 6766961 -192863189 - MER45B DNA AcHobo -711 329 1 531 31 0 0 chr5 6767162 6767227 -192862923 + (TATG)n Simple_repeat Simple_repeat 4 68 0 793 231 61 47 chr5 6768899 6769111 -192861039 + MIR SINE MIR 48 262 0 4315 124 15 126 chr5 6770806 6771730 -192858420 - LTR12 LTR ERV1 0 826 5 3071 155 18 26 chr5 6771746 6772354 -192857796 - pTR5 LTR ERV1 -1094 1344 742 875 198 6 0 chr5 6774242 6774414 -192855736 - FRAM SINE Alu -3 173 1 874 202 97 11 chr5 6774425 6774692 -192855458 + Charlie1b DNA MER1_type 109 398 -125 709 252 52 0 chr5 6775310 6775465 -192854685 - AluJo SINE Alu -137 175 13 2192 99 74 42 chr5 6775636 6775989 -192854161 + THE1B LTR MaLR 1 364 0 234 282 221 38 chr5 6775989 6776120 -192854030 - MIR SINE MIR -25 237 83 911 182 6 0 chr5 6776280 6776439 -192853711 + AluJb SINE Alu 138 297 -15 180 264 104 19 chr5 6776447 6776553 -192853597 + MIR SINE MIR 148 262 0 1752 182 29 45 chr5 6776585 6776825 -192853325 - L1MB8 LINE L1 -1 6177 5946 1915 117 3 43 chr5 6776825 6777150 -192853000 + AluSx SINE Alu 1 312 0 1752 182 29 45 chr5 6777150 6777338 -192852812 - L1MB8 LINE L1 -232 5946 5757 1595 143 4 19 chr5 6778031 6778289 -192851861 - AluJo SINE Alu -25 287 34 818 128 15 0 chr5 6779238 6779371 -192850779 - FRAM SINE Alu -24 152 18 1575 117 58 21 chr5 6779669 6779960 -192850190 + AluSx SINE Alu 2 303 -9 210 200 40 0 chr5 6779992 6780042 -192850108 + MIR SINE MIR 67 118 -144 604 243 47 42 chr5 6780054 6780268 -192849882 - MIR SINE MIR -30 232 18 333 0 0 0 chr5 6780575 6780612 -192849538 + (A)n Simple_repeat Simple_repeat 1 37 0 207 260 26 39 chr5 6781744 6781821 -192848329 - L2 LINE L2 -333 2980 2905 286 185 19 0 chr5 6782756 6782810 -192847340 - MER20 DNA MER1_type -6 213 159 1214 122 0 0 chr5 6783129 6783309 -192846841 + AluSg/x SINE Alu 120 299 -13 24 0 0 0 chr5 6783599 6783623 -192846527 + AT_rich Low_complexity Low_complexity 1 24 0 1841 115 10 20 chr5 6783721 6784017 -192846133 + AluSx SINE Alu 1 293 -19 667 152 27 0 chr5 6784097 6784209 -192845941 - FLAM_A SINE Alu -8 134 20 469 177 0 0 chr5 6784364 6784443 -192845707 - MER2 DNA MER2_type -266 79 1 257 167 0 0 chr5 6784444 6784486 -192845664 - MER2 DNA MER2_type -303 42 1 234 267 133 0 chr5 6784529 6784619 -192845531 + MIR SINE MIR 113 214 -48 1575 129 4 0 chr5 6785490 6785722 -192844428 - AluSq SINE Alu -14 299 67 447 208 50 0 chr5 6786009 6786110 -192844040 - MLT1H LTR MaLR 0 549 444 * 894 227 30 47 chr5 6786092 6786402 -192843748 - MLT1H LTR MaLR -248 307 30 199 217 0 0 chr5 6787132 6787178 -192842972 + L2 LINE L2 2911 2956 -316 226 333 0 0 chr5 6788325 6788397 -192841753 + L2 LINE L2 2902 2973 -299 2237 196 52 5 chr5 6788799 6789243 -192840907 + L1MB7 LINE L1 5579 6043 -141 1851 101 7 35 chr5 6789395 6789704 -192840446 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 6790823 6790866 -192839284 + AT_rich Low_complexity Low_complexity 1 43 0 2083 186 38 53 chr5 6790866 6790989 -192839161 + MLT1D LTR MaLR 1 124 -381 2009 101 10 10 chr5 6790989 6791009 -192839141 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 6791009 6791030 -192839120 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2009 101 10 10 chr5 6791030 6791307 -192838843 - AluSx SINE Alu -31 281 2 2083 186 38 53 chr5 6791307 6791688 -192838462 + MLT1D LTR MaLR 124 497 -8 967 242 54 0 chr5 6791872 6792095 -192838055 + L1MC4 LINE L1 6800 7034 -1008 1146 156 0 0 chr5 6792108 6792281 -192837869 - AluSq SINE Alu -140 173 1 2037 226 66 20 chr5 6792314 6792907 -192837243 + L1MC4 LINE L1 7043 7662 -380 192 40 0 0 chr5 6792925 6792950 -192837200 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 291 227 93 0 chr5 6792953 6793028 -192837122 + L1MB4 LINE L1 5812 5893 -278 1381 149 149 15 chr5 6793028 6793289 -192836861 + AluJb SINE Alu 2 297 -5 2236 104 0 0 chr5 6793291 6793598 -192836552 + AluSx SINE Alu 3 309 -3 1410 160 73 7 chr5 6793607 6793895 -192836255 + L1MB4 LINE L1 5873 6179 -1 603 170 0 0 chr5 6793937 6794043 -192836107 + L1MC4 LINE L1 7709 7814 -228 763 67 38 0 chr5 6794044 6794149 -192836001 + HY1 scRNA scRNA 2 110 -2 1434 126 29 17 chr5 6794266 6794504 -192835646 + AluSx SINE Alu 61 301 -11 744 218 175 26 chr5 6794889 6795197 -192834953 - L1MC4 LINE L1 -5 8037 7684 2211 99 0 0 chr5 6795200 6795493 -192834657 + AluSg1 SINE Alu 1 293 -16 324 0 0 0 chr5 6795672 6795708 -192834442 + (CA)n Simple_repeat Simple_repeat 2 37 0 1458 150 59 31 chr5 6795756 6795878 -192834272 + AluJb SINE Alu 1 118 -194 183 42 0 0 chr5 6795878 6795902 -192834248 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1458 150 59 31 chr5 6795902 6796066 -192834084 + AluJb SINE Alu 118 295 -17 282 268 65 89 chr5 6796243 6796489 -192833661 + MLT1K LTR MaLR 189 428 -160 232 222 11 78 chr5 6796600 6796690 -192833460 + MIR SINE MIR 179 262 0 817 165 0 122 chr5 6797149 6797337 -192832813 + FRAM SINE Alu 1 165 -1 658 113 0 0 chr5 6797251 6797348 -192832802 + AluJ/FRAM SINE Alu 216 312 0 193 93 0 47 chr5 6798547 6798590 -192831560 + (TCTCCC)n Simple_repeat Simple_repeat 3 43 0 30 77 0 0 chr5 6798911 6798976 -192831174 + GC_rich Low_complexity Low_complexity 1 65 0 379 292 99 5 chr5 6799801 6799993 -192830157 - MIR SINE MIR -52 210 1 596 281 101 0 chr5 6800430 6800647 -192829503 - MIR SINE MIR -6 256 18 617 0 14 0 chr5 6801147 6801220 -192828930 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 2140 117 0 0 chr5 6801222 6801504 -192828646 - AluSx SINE Alu -30 282 1 22 0 0 0 chr5 6801516 6801538 -192828612 + AT_rich Low_complexity Low_complexity 1 22 0 187 226 151 0 chr5 6801900 6801953 -192828197 - MIR3 SINE MIR -21 187 127 21 0 0 0 chr5 6802022 6802043 -192828107 + AT_rich Low_complexity Low_complexity 1 21 0 721 216 57 173 chr5 6802531 6802775 -192827375 - L2 LINE L2 0 3313 3042 635 39 0 0 chr5 6802775 6802853 -192827297 - AluY SINE Alu -11 301 224 721 216 57 173 chr5 6802853 6803194 -192826956 - L2 LINE L2 -271 3042 2709 23 0 0 0 chr5 6903459 6903482 -192726668 + AT_rich Low_complexity Low_complexity 1 23 0 279 312 78 7 chr5 6903501 6903655 -192726495 + MIR SINE MIR 20 184 -78 1148 268 134 5 chr5 6905164 6905574 -192724576 + Charlie1a DNA MER1_type 60 522 -933 2541 255 90 25 chr5 6906540 6907528 -192722622 - L1MC4a LINE L1 -35 7773 6722 258 260 65 32 chr5 6909137 6909260 -192720890 - L2 LINE L2 -25 3288 3162 1944 73 11 11 chr5 6909708 6909968 -192720182 - AluY SINE Alu -14 297 38 530 102 0 11 chr5 6910068 6910156 -192719994 + (GGAA)n Simple_repeat Simple_repeat 1 87 0 297 229 57 0 chr5 6910943 6911013 -192719137 + MER5A DNA MER1_type 45 118 -71 370 274 12 41 chr5 6911948 6912158 -192717992 + GA-rich Low_complexity Low_complexity 1 203 0 238 345 9 9 chr5 6912191 6912301 -192717849 + GA-rich Low_complexity Low_complexity 1 110 0 329 243 22 44 chr5 6912412 6912548 -192717602 + CT-rich Low_complexity Low_complexity 5 137 0 498 149 0 0 chr5 6912586 6912673 -192717477 + (T)n Simple_repeat Simple_repeat 1 87 0 222 237 0 82 chr5 6912742 6912839 -192717311 + C-rich Low_complexity Low_complexity 3 91 0 2191 109 13 3 chr5 6916477 6916779 -192713371 + AluSx SINE Alu 1 305 -7 2103 106 0 4 chr5 6918549 6918824 -192711326 - AluSg SINE Alu -19 291 18 762 276 61 82 chr5 6919226 6919882 -192710268 + L1MEd LINE L1 457 1098 -5021 1973 188 55 65 chr5 6920470 6920975 -192709175 + MLT2B3 LTR ERVL 1 500 -54 195 175 0 0 chr5 6920978 6921035 -192709115 + A-rich Low_complexity Low_complexity 1 57 0 398 121 0 30 chr5 6921036 6921102 -192709048 + MLT2A2 LTR ERVL 390 453 0 863 236 62 126 chr5 6922064 6922900 -192707250 + L1MCa LINE L1 854 1851 -4756 * 1632 192 60 6 chr5 6922889 6923238 -192706912 + L1MD1 LINE L1 5875 6242 0 313 197 0 15 chr5 6923373 6923439 -192706711 + Charlie1b DNA MER1_type 410 474 -49 233 291 0 0 chr5 6923791 6923846 -192706304 - MIR SINE MIR -113 149 95 196 352 28 0 chr5 6924922 6924993 -192705157 + MIR SINE MIR 54 126 -82 2336 80 0 22 chr5 6925278 6925591 -192704559 + AluSp SINE Alu 1 306 -7 342 0 0 0 chr5 6925764 6925802 -192704348 + (TG)n Simple_repeat Simple_repeat 2 39 0 1552 217 45 12 chr5 6926567 6926904 -192703246 - MER7A DNA MER2_type 0 346 1 284 341 11 21 chr5 6926966 6927084 -192703066 + MER5B DNA MER1_type 65 174 -4 2555 55 7 0 chr5 6928031 6928340 -192701810 + AluY SINE Alu 1 311 0 238 277 175 15 chr5 6928349 6928486 -192701664 + L3 LINE CR1 1226 1384 -193 15203 86 26 3 chr5 6928488 6931415 -192698735 - L1PA8 LINE L1 -20 6152 3161 216 111 0 0 chr5 6931497 6931533 -192698617 + (TAAAAA)n Simple_repeat Simple_repeat 2 37 0 184 275 0 0 chr5 6931587 6931627 -192698523 + L3b LINE CR1 1531 1570 -13 2323 194 26 7 chr5 6931748 6932165 -192697985 + MSTB LTR MaLR 2 426 0 186 317 0 0 chr5 6932854 6932914 -192697236 - MIR SINE MIR -146 116 57 828 174 95 26 chr5 6933868 6934058 -192696092 - MER105 DNA DNA -1 203 1 297 272 184 53 chr5 6934134 6934340 -192695810 - L2 LINE L2 -5 3308 3076 2521 76 0 0 chr5 6934344 6934648 -192695502 - AluY SINE Alu -7 304 1 23 78 0 0 chr5 6935334 6935385 -192694765 + AT_rich Low_complexity Low_complexity 1 51 0 847 258 125 31 chr5 6935402 6935786 -192694364 - L1MC4 LINE L1 -2096 5946 5527 215 233 0 0 chr5 6938191 6938234 -192691916 - L2 LINE L2 -1727 1587 1545 183 326 22 34 chr5 6938539 6938628 -192691522 - L2 LINE L2 -352 2962 2875 327 262 119 9 chr5 6946550 6946821 -192683329 - L1MEd LINE L1 -4862 1208 916 226 254 91 73 chr5 6946913 6947133 -192683017 - L1MEd LINE L1 -5291 779 556 393 336 54 21 chr5 6948126 6948367 -192681783 - MIR SINE MIR -12 250 2 2184 177 3 0 chr5 6948670 6949014 -192681136 + MER7A DNA MER2_type 4 346 0 570 158 61 0 chr5 6949018 6949132 -192681018 + MLT2D LTR ERVL 1 121 -293 5331 165 30 24 chr5 6949134 6950394 -192679756 + L1MA7 LINE L1 5020 6286 -5 1394 157 15 168 chr5 6950408 6950688 -192679462 + MLT2D LTR ERVL 111 335 -62 261 0 0 0 chr5 6950688 6950717 -192679433 + (TG)n Simple_repeat Simple_repeat 2 30 0 1394 157 15 168 chr5 6950717 6950770 -192679380 + MLT2D LTR ERVL 335 394 -3 259 366 43 6 chr5 6951702 6951866 -192678284 - MIR SINE MIR -26 236 67 933 240 4 39 chr5 6951927 6952156 -192677994 - MER58A DNA MER1_type 0 224 4 241 167 0 42 chr5 6952364 6952412 -192677738 - MSTB LTR MaLR 0 426 381 1355 106 21 0 chr5 6952412 6952600 -192677550 - THE1C-int LTR MaLR -498 1082 891 544 126 0 23 chr5 6952574 6952661 -192677489 - THE1C-int LTR MaLR -1492 88 4 * 1831 151 46 40 chr5 6952667 6953038 -192677112 - THE1C LTR MaLR -2 373 1 1672 117 19 30 chr5 6953973 6954280 -192675870 - AluSq SINE Alu 0 327 24 1657 85 35 4 chr5 6954599 6954858 -192675292 - AluY SINE Alu -22 289 23 1578 151 68 0 chr5 6955334 6955613 -192674537 + Tigger2 DNA MER2_type 2418 2715 -3 603 238 72 18 chr5 6955665 6955888 -192674262 + L1ME2 LINE L1 4929 5163 -983 904 188 4 2 chr5 6955894 6956140 -192674010 + AluJb SINE Alu 2 295 -17 1387 256 45 8 chr5 6956143 6956662 -192673488 + L1ME2 LINE L1 5170 5707 -457 414 349 9 5 chr5 6956734 6956949 -192673201 + L1ME2 LINE L1 5842 6057 -107 2044 196 43 5 chr5 6957319 6957717 -192672433 + MLT2C2 LTR ERVL 4 416 -48 183 184 0 0 chr5 6957722 6957760 -192672390 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 249 65 0 0 chr5 6957768 6957799 -192672351 - MLT2B1 LTR ERVL 0 520 490 266 174 0 0 chr5 6957819 6957865 -192672285 + MLT2C2 LTR ERVL 509 554 0 342 343 30 18 chr5 6960225 6960394 -192669756 + MIR SINE MIR 86 256 -6 21 0 0 0 chr5 6962036 6962057 -192668093 + AT_rich Low_complexity Low_complexity 1 21 0 1854 108 36 33 chr5 6962178 6962484 -192667666 - AluSx SINE Alu -5 307 1 622 349 7 0 chr5 6962889 6963158 -192666992 + L1ME LINE L1 5495 5765 -356 720 287 116 10 chr5 6963399 6963849 -192666301 - MLT1G LTR MaLR -41 549 13 321 96 19 0 chr5 6964102 6964154 -192665996 - L1PA15 LINE L1 -642 5526 5474 * 2469 144 10 5 chr5 6964151 6964540 -192665610 + L1PA15 LINE L1 5515 5905 -260 3488 62 5 7 chr5 6964540 6964989 -192665161 + LTR7 LTR ERV1 1 448 -2 10462 98 25 16 chr5 6964991 6966575 -192663575 + HERVH LTR ERV1 1 1599 -6114 23 33 0 0 chr5 6967191 6967221 -192662929 + AT_rich Low_complexity Low_complexity 1 30 0 1528 294 63 10 chr5 6967815 6968040 -192662110 - L1ME3A LINE L1 0 6170 5946 579 292 153 44 chr5 6968040 6968569 -192661581 - L1MB4 LINE L1 -259 5921 5451 2879 158 68 2 chr5 6968569 6969096 -192661054 - MER34B LTR ERV1 0 565 4 579 292 153 44 chr5 6969096 6969662 -192660488 - L1MB4 LINE L1 -729 5451 4685 22 0 0 0 chr5 6969686 6969708 -192660442 + AT_rich Low_complexity Low_complexity 1 22 0 1922 107 38 3 chr5 6969710 6970000 -192660150 - AluSg SINE Alu -6 304 5 374 230 0 11 chr5 6970022 6970109 -192660041 - MLT1A2 LTR MaLR -1 373 288 9935 96 11 12 chr5 6970213 6971634 -192658516 + HERVH LTR ERV1 1569 2987 -4726 812 169 20 0 chr5 6971628 6971776 -192658374 + HERVH LTR ERV1 3140 3290 -4423 * 3334 122 6 2 chr5 6971766 6972266 -192657884 + HERVH LTR ERV1 3492 3993 -3720 4386 144 3 1 chr5 6972268 6972929 -192657221 + HERVH LTR ERV1 4488 5149 -2564 902 113 7 13 chr5 6972930 6973080 -192657070 + HERVH LTR ERV1 5600 5748 -1965 1850 74 8 0 chr5 6973111 6973369 -192656781 + HERVH LTR ERV1 7429 7688 -25 1603 143 32 11 chr5 6973378 6973399 -192656751 + L1PA15 LINE L1 5880 5899 -266 3482 64 0 9 chr5 6973399 6973851 -192656299 + LTR7 LTR ERV1 1 448 -2 1603 143 32 11 chr5 6973851 6974109 -192656041 + L1PA15 LINE L1 5899 6165 0 2534 153 70 98 chr5 6974638 6975371 -192654779 - LTR8A LTR ERV1 0 691 1 420 167 0 0 chr5 6975921 6975987 -192654163 + MER41C LTR ERV1 1 66 -488 273 111 0 0 chr5 6975983 6976019 -192654131 + MER41C LTR ERV1 25 60 -494 * 300 116 23 0 chr5 6976019 6976062 -192654088 + MER41C LTR ERV1 23 66 -488 243 111 28 0 chr5 6976058 6976094 -192654056 + MER41C LTR ERV1 25 61 -493 * 3138 131 82 0 chr5 6976094 6976584 -192653566 + MER41C LTR ERV1 25 554 0 251 237 31 82 chr5 6976610 6976707 -192653443 + MIR SINE MIR 92 183 -79 248 278 67 0 chr5 6976807 6976897 -192653253 - MER117 DNA MER1_type -37 160 65 2279 98 3 0 chr5 6977616 6977922 -192652228 - AluSp SINE Alu -6 307 1 2505 116 16 8 chr5 6978324 6978696 -192651454 + THE1C LTR MaLR 1 375 0 10410 116 30 15 chr5 6978696 6980253 -192649897 + THE1C-int LTR MaLR 1 1580 0 2560 116 14 5 chr5 6980253 6980624 -192649526 + THE1C LTR MaLR 1 374 -1 243 231 81 46 chr5 6981025 6981198 -192648952 + L1MCc LINE L1 1291 1469 -4954 320 241 43 43 chr5 6981323 6981439 -192648711 + L1MCc LINE L1 1907 2022 -4919 216 0 0 0 chr5 6981441 6981465 -192648685 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 5492 116 39 5 chr5 6981467 6982146 -192648004 - L1PA13 LINE L1 -11 6152 5497 2249 87 3 6 chr5 6982146 6982458 -192647692 - AluY SINE Alu 0 311 1 5492 116 39 5 chr5 6982458 6983167 -192646983 - L1PA13 LINE L1 -666 5497 4757 22 0 0 0 chr5 6983310 6983332 -192646818 + AT_rich Low_complexity Low_complexity 1 22 0 1638 163 3 26 chr5 6983466 6983772 -192646378 - AluJo SINE Alu -13 299 1 316 266 36 27 chr5 6983795 6983906 -192646244 + MIR SINE MIR 16 122 -93 3356 286 171 29 chr5 6983931 6985887 -192644263 + L2 LINE L2 1060 3312 -1 293 230 127 56 chr5 6986500 6986626 -192643524 - MIR3 SINE MIR -51 157 23 215 234 78 52 chr5 6987165 6987242 -192642908 + MIR SINE MIR 61 139 -69 698 208 127 34 chr5 6987376 6987763 -192642387 + MER31B LTR ERV1 1 543 0 1344 235 87 20 chr5 6989514 6989952 -192640198 + MLT1C LTR MaLR 1 467 0 1702 231 62 9 chr5 6990501 6990938 -192639212 - MLT1C LTR MaLR 0 467 8 2019 91 0 21 chr5 6992236 6992521 -192637629 + AluY SINE Alu 17 295 -16 1316 160 22 9 chr5 6992590 6992821 -192637329 + MLT1C LTR MaLR 1 234 -233 1958 113 17 125 chr5 6993075 6993483 -192636667 - THE1B LTR MaLR 0 364 1 1927 112 7 0 chr5 6993777 6994055 -192636095 - L1PA12 LINE L1 -141 6027 5748 1773 171 105 0 chr5 6994094 6994399 -192635751 + MER1B DNA MER1_type 1 337 0 2421 126 27 10 chr5 6995877 6996283 -192633867 - L1MA3 LINE L1 0 6305 5893 1511 225 31 39 chr5 6996293 6996707 -192633443 - L1MB5 LINE L1 -1 6173 5763 2515 20 0 3 chr5 6996903 6997199 -192632951 - AluY SINE Alu -16 295 1 964 301 106 41 chr5 6997206 6997771 -192632379 + L1M4 LINE L1 2769 3370 -2776 242 259 104 50 chr5 6997894 6998114 -192632036 + L1M4 LINE L1 3545 3776 -2370 2262 156 80 3 chr5 6998148 6998538 -192631612 + MSTA LTR MaLR 9 428 0 307 154 0 182 chr5 6998569 6998679 -192631471 + L1MC4 LINE L1 6614 6703 -1339 313 338 22 37 chr5 6998756 6998892 -192631258 + L1ME1 LINE L1 5730 5863 -303 30 45 0 0 chr5 6999231 6999275 -192630875 + AT_rich Low_complexity Low_complexity 1 44 0 892 270 41 55 chr5 7000560 7001019 -192629131 - LTR16A1 LTR ERVL -4 453 1 250 359 29 34 chr5 7001181 7001390 -192628760 - HERV16 LTR ERVL -367 5287 5080 978 323 77 45 chr5 7001466 7002583 -192627567 - HERV16 LTR ERVL -743 5021 3841 825 340 42 11 chr5 7002615 7003062 -192627088 - HERV16 LTR ERVL -4535 461 1 660 276 89 25 chr5 7003063 7003227 -192626923 - LTR16A1 LTR ERVL -1 456 304 1850 211 8 8 chr5 7003227 7003592 -192626558 - MLT1A1 LTR MaLR 0 365 1 660 276 89 25 chr5 7003592 7003799 -192626351 - LTR16A1 LTR ERVL -153 304 16 239 274 128 10 chr5 7003802 7003904 -192626246 + MIR SINE MIR 39 152 -110 480 248 0 0 chr5 7006045 7006150 -192624000 - L1MC5 LINE L1 -542 7419 7315 872 195 7 7 chr5 7006160 7006314 -192623836 + MLT1D LTR MaLR 1 154 -351 228 189 0 0 chr5 7007694 7007731 -192622419 + L1P LINE L1 4885 4921 -1225 315 281 189 18 chr5 7007960 7008241 -192621909 + L1ME3A LINE L1 1627 1955 -4441 325 286 42 60 chr5 7008277 7008568 -192621582 + L1ME3A LINE L1 2016 2267 -3948 1609 145 64 28 chr5 7008568 7008850 -192621300 + AluJb SINE Alu 1 292 -20 325 286 42 60 chr5 7008850 7008896 -192621254 + L1ME3A LINE L1 2267 2312 -3903 243 251 80 68 chr5 7008917 7009041 -192621109 + L1ME3A LINE L1 4498 4626 -1589 1959 144 18 37 chr5 7009041 7009423 -192620727 - THE1C LTR MaLR 0 375 1 243 251 80 68 chr5 7009423 7009461 -192620689 + L1ME3A LINE L1 4626 4662 -1553 291 266 70 21 chr5 7009510 7009653 -192620497 + L1ME3A LINE L1 5536 5685 -554 412 257 73 0 chr5 7009673 7009809 -192620341 + L1ME3A LINE L1 5777 5922 -317 1834 148 0 0 chr5 7010223 7010480 -192619670 - AluSx SINE Alu -20 292 36 25 31 0 0 chr5 7013336 7013368 -192616782 + AT_rich Low_complexity Low_complexity 1 32 0 288 359 23 0 chr5 7015603 7015731 -192614419 + LTR16A LTR ERVL 16 146 -304 636 327 81 0 chr5 7015766 7015977 -192614173 + LTR16A LTR ERVL 223 450 0 2371 93 3 0 chr5 7016522 7016822 -192613328 - AluSp SINE Alu -12 301 1 658 233 127 12 chr5 7016917 7017170 -192612980 + MER114 LTR ERV 1 282 -366 920 226 17 41 chr5 7017170 7017619 -192612531 + L1ME2 LINE L1 5515 6046 -118 493 289 41 5 chr5 7017726 7017923 -192612227 + MER114 LTR ERV 445 648 0 1984 219 35 22 chr5 7018216 7018705 -192611445 + MLT1D LTR MaLR 3 497 -8 1111 209 34 47 chr5 7018757 7019053 -192611097 - L1ME2 LINE L1 -10 6154 5863 1735 250 53 21 chr5 7019055 7019886 -192610264 - L1ME2 LINE L1 -396 5768 4905 2450 96 0 3 chr5 7020486 7020799 -192609351 + AluSp SINE Alu 1 312 -1 27 29 0 0 chr5 7021152 7021186 -192608964 + AT_rich Low_complexity Low_complexity 1 34 0 252 350 26 8 chr5 7021838 7021955 -192608195 + L2 LINE L2 3150 3268 -4 208 250 11 11 chr5 7022337 7022416 -192607734 + (TA)n Simple_repeat Simple_repeat 2 83 -6 2392 87 0 3 chr5 7022416 7022728 -192607422 + AluY SINE Alu 1 311 0 208 250 11 11 chr5 7022728 7022736 -192607414 + (TA)n Simple_repeat Simple_repeat 82 89 0 304 325 126 15 chr5 7023179 7023385 -192606765 + LTR33 LTR ERVL 293 521 0 2113 185 28 28 chr5 7023963 7024385 -192605765 + MSTB LTR MaLR 2 423 -3 9269 180 21 8 chr5 7024389 7026019 -192604131 + MSTB-int LTR MaLR 1 1651 0 1175 160 5 0 chr5 7026021 7026209 -192603941 + MSTB LTR MaLR 3 191 -235 1104 173 309 19 chr5 7026312 7026660 -192603490 - MER31B LTR ERV1 -9 505 6 23 0 0 0 chr5 7027500 7027523 -192602627 + AT_rich Low_complexity Low_complexity 1 23 0 621 228 28 62 chr5 7027634 7027845 -192602305 + MLT1G LTR MaLR 1 204 -391 1503 186 84 12 chr5 7027846 7028179 -192601971 + MLT1A1 LTR MaLR 9 365 0 1058 214 34 8 chr5 7028252 7028486 -192601664 + MLT1G LTR MaLR 351 590 0 23 0 0 0 chr5 7028526 7028549 -192601601 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 7028713 7028737 -192601413 + AT_rich Low_complexity Low_complexity 1 24 0 221 278 19 0 chr5 7029061 7029115 -192601035 - L2 LINE L2 -253 3060 3006 2548 164 67 61 chr5 7029278 7029900 -192600250 + L1MC1 LINE L1 5710 6332 -1 260 243 21 7 chr5 7032692 7032836 -192597314 + (TG)n Simple_repeat Simple_repeat 1 146 0 571 227 244 27 chr5 7034143 7034635 -192595515 + LTR50 LTR ERVL 83 791 -4 285 29 0 0 chr5 7036492 7036526 -192593624 + (TG)n Simple_repeat Simple_repeat 1 34 0 204 132 26 0 chr5 7036526 7036564 -192593586 + GA-rich Low_complexity Low_complexity 2 40 0 212 364 31 8 chr5 7037429 7037558 -192592592 + MIR SINE MIR 20 151 -111 931 189 0 11 chr5 7037933 7038113 -192592037 - MER49 LTR ERV1 0 923 746 2176 129 26 6 chr5 7038113 7038455 -192591695 - MER49 LTR ERV1 -565 358 10 1047 202 40 0 chr5 7038505 7038703 -192591447 + MER20 DNA MER1_type 5 210 -9 291 54 0 0 chr5 7038720 7038757 -192591393 + (TG)n Simple_repeat Simple_repeat 2 38 0 258 156 0 0 chr5 7039565 7039610 -192590540 + CT-rich Low_complexity Low_complexity 2 46 0 2200 64 44 17 chr5 7041233 7041530 -192588620 - AluY SINE Alu -6 305 1 252 0 0 0 chr5 7042119 7042147 -192588003 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 250 394 7 19 chr5 7042845 7043000 -192587150 + MER5A DNA MER1_type 1 153 -36 191 114 29 0 chr5 7043702 7043737 -192586413 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 210 37 0 0 chr5 7043829 7043856 -192586294 + (CAA)n Simple_repeat Simple_repeat 1 27 0 332 325 22 39 chr5 7043869 7044176 -192585974 + L1MCa LINE L1 1164 1526 -4890 186 43 0 0 chr5 7044299 7044322 -192585828 + (A)n Simple_repeat Simple_repeat 1 23 0 274 314 16 21 chr5 7044352 7044546 -192585604 + L1MCa LINE L1 1684 1876 -4550 920 96 7 44 chr5 7044552 7044687 -192585463 - FRAM SINE Alu -27 149 20 233 303 0 9 chr5 7044693 7044802 -192585348 + L1MCa LINE L1 1917 2024 -4583 451 101 0 14 chr5 7044803 7044872 -192585278 + MER4A LTR ERV1 1 68 -596 923 250 63 31 chr5 7046933 7047288 -192582862 - MLT2D LTR ERVL -8 389 1 220 349 28 28 chr5 7047644 7047750 -192582400 + L2 LINE L2 2953 3058 -214 242 372 16 16 chr5 7047968 7048097 -192582053 + MIR3 SINE MIR 3 131 -77 425 296 66 49 chr5 7048243 7048469 -192581681 + MIR SINE MIR 9 238 -24 218 205 157 0 chr5 7048538 7048621 -192581529 + MIR SINE MIR 59 154 -108 247 297 40 20 chr5 7049578 7049679 -192580471 + MIR SINE MIR 50 152 -110 21 36 0 0 chr5 7050908 7050936 -192579214 + AT_rich Low_complexity Low_complexity 1 28 0 682 143 56 8 chr5 7051288 7051414 -192578736 - L1MB5 LINE L1 0 6174 6043 2427 72 0 7 chr5 7051557 7051863 -192578287 - AluY SINE Alu -7 304 1 624 51 0 25 chr5 7051863 7051942 -192578208 - AluY SINE Alu -177 134 58 1088 166 59 63 chr5 7052322 7052512 -192577638 - L1MB5 LINE L1 -122 6052 5862 1726 179 43 18 chr5 7052512 7052841 -192577309 + MER1B DNA MER1_type 1 337 0 1088 166 59 63 chr5 7052841 7052921 -192577229 - L1MB5 LINE L1 -312 5862 5783 1079 203 11 103 chr5 7052940 7053319 -192576831 - MLT1B LTR MaLR -32 358 15 1230 199 139 42 chr5 7053337 7053576 -192576574 - L1MB5 LINE L1 -386 5788 5507 2238 125 3 0 chr5 7053576 7053887 -192576263 - AluSx SINE Alu 0 312 1 1230 199 139 42 chr5 7053887 7053979 -192576171 - L1MB5 LINE L1 -667 5507 5425 471 247 61 47 chr5 7053977 7054212 -192575938 - L1MC/D LINE L1 -350 5771 5541 * 3204 199 61 15 chr5 7054415 7055169 -192574981 - L1MB5 LINE L1 -1910 4236 3448 3299 191 30 80 chr5 7055172 7056024 -192574126 + L1PA12 LINE L1 5347 6156 -12 269 250 47 0 chr5 7056353 7056417 -192573733 + L2 LINE L2 2897 2963 -309 636 209 32 0 chr5 7056419 7056562 -192573588 - L1MC4 LINE L1 -964 7062 6884 231 267 0 80 chr5 7056663 7056738 -192573412 + L2 LINE L2 3245 3313 0 1244 209 133 37 chr5 7057415 7057839 -192572311 + MER66A LTR ERV1 97 478 0 239 284 81 20 chr5 7058776 7058924 -192571226 - L1 LINE L1 -1723 4423 4267 2504 284 72 37 chr5 7059829 7061540 -192568610 - L1 LINE L1 -2230 3916 2146 378 260 42 0 chr5 7061561 7061657 -192568493 + MER45A DNA AcHobo 79 178 0 254 254 218 0 chr5 7061805 7061915 -192568235 - MIR SINE MIR -2 260 127 230 341 44 0 chr5 7061942 7062033 -192568117 - MIR SINE MIR -123 139 45 198 0 0 0 chr5 7063230 7063252 -192566898 + (A)n Simple_repeat Simple_repeat 1 22 0 186 43 0 0 chr5 7063668 7063691 -192566459 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1377 112 0 16 chr5 7063711 7063898 -192566252 - AluSx SINE Alu -127 185 2 1023 214 119 35 chr5 7064861 7065209 -192564941 - MER31B LTR ERV1 0 543 74 4149 134 47 16 chr5 7066950 7067628 -192562522 - LTR34 LTR ERV1 0 699 1 25 0 0 0 chr5 7069028 7069053 -192561097 + AT_rich Low_complexity Low_complexity 1 25 0 473 279 80 63 chr5 7069170 7069532 -192560618 + L1ME4a LINE L1 5574 5941 -180 363 282 24 8 chr5 7069725 7069764 -192560386 - L1MA10 LINE L1 -14 6320 6282 1782 254 34 44 chr5 7069764 7070355 -192559795 - L1ME1 LINE L1 -44 6122 5538 6815 85 2 2 chr5 7070381 7071616 -192558534 - L1PA10 LINE L1 0 6168 4917 439 286 82 48 chr5 7071691 7071960 -192558190 - LTR43 LTR ERV1 -145 457 180 988 217 9 9 chr5 7072475 7072687 -192557463 - L1ME1 LINE L1 -629 5537 5326 2631 231 113 85 chr5 7072689 7072940 -192557210 + L1M4 LINE L1 3611 3854 -2292 372 111 0 0 chr5 7072940 7073003 -192557147 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2631 231 113 85 chr5 7073003 7073249 -192556901 + L1M4 LINE L1 3854 4092 -2054 1946 141 3 25 chr5 7073249 7073568 -192556582 - AluSx SINE Alu 0 312 1 2631 231 113 85 chr5 7073568 7074617 -192555533 + L1M4 LINE L1 4092 5335 -811 2219 119 64 9 chr5 7074894 7075238 -192554912 - THE1B LTR MaLR -1 363 1 203 187 40 27 chr5 7076287 7076362 -192553788 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 183 326 58 12 chr5 7076834 7076920 -192553230 - MIR SINE MIR -153 109 20 730 293 127 21 chr5 7076926 7077305 -192552845 - L2 LINE L2 -1 3312 2894 283 275 113 50 chr5 7077613 7077773 -192552377 + MIR3 SINE MIR 13 182 -26 212 100 50 0 chr5 7078723 7078763 -192551387 + (TG)n Simple_repeat Simple_repeat 2 43 0 879 161 6 25 chr5 7079516 7079678 -192550472 - THE1C LTR MaLR 0 375 217 583 162 9 9 chr5 7079682 7079787 -192550363 - THE1C LTR MaLR -321 107 3 354 163 28 0 chr5 7081943 7082015 -192548135 + Tigger4(Zombi) DNA MER2_type -2 2717 -14 1810 166 7 14 chr5 7082289 7082584 -192547566 + AluJb SINE Alu 1 293 -19 709 258 79 97 chr5 7083400 7083908 -192546242 + MLT1F LTR MaLR 28 526 -16 5137 106 13 12 chr5 7084474 7085164 -192544986 - LTR8 LTR ERV1 0 691 1 2314 165 89 50 chr5 7086091 7086624 -192543526 + LTR8A LTR ERV1 1 554 -173 2256 162 77 2 chr5 7086624 7087026 -192543124 + MER57B LTR ERV1 3 434 0 880 222 20 86 chr5 7087840 7088142 -192542008 + MER33 DNA MER1_type 7 288 -36 411 163 163 0 chr5 7088165 7088263 -192541887 + L1MA8 LINE L1 6170 6283 -8 226 131 66 82 chr5 7088268 7088329 -192541821 + MER33 DNA MER1_type 258 317 -7 329 305 207 53 chr5 7088918 7089256 -192540894 - L1ME LINE L1 -5629 441 52 3241 159 19 62 chr5 7089530 7090170 -192539980 - LTR9 LTR ERV1 0 612 1 2072 187 84 25 chr5 7090573 7091189 -192538961 - MER39 LTR ERV1 -5 702 2 281 261 51 72 chr5 7091337 7091475 -192538675 + MLT1H LTR MaLR 37 171 -378 320 287 18 43 chr5 7091581 7091646 -192538504 + MER41B LTR ERV1 54 119 -516 2455 79 0 10 chr5 7091646 7091951 -192538199 + AluY SINE Alu 1 302 -9 320 287 18 43 chr5 7091951 7092134 -192538016 + MER41B LTR ERV1 119 430 -205 250 260 130 41 chr5 7092523 7092646 -192537504 + MLT1H LTR MaLR 400 533 -16 1763 165 9 39 chr5 7092771 7093105 -192537045 + MER65A LTR ERV1 3 326 -119 554 90 51 0 chr5 7093095 7093173 -192536977 + MER51B LTR ERV1 296 377 0 * 1800 199 18 15 chr5 7094826 7095168 -192534982 + MER61A LTR ERV1 1 343 0 4456 133 61 22 chr5 7095168 7095926 -192534224 + MER61A-int LTR ERV1 1 787 -4430 * 26149 98 27 14 chr5 7095911 7099710 -192530440 + MER61A-int LTR ERV1 1320 5216 -1 1913 164 26 23 chr5 7099710 7100052 -192530098 + MER61A LTR ERV1 1 343 0 455 273 62 11 chr5 7100185 7100361 -192529789 - MIR SINE MIR -58 204 20 641 284 39 0 chr5 7100942 7101146 -192529004 + L1ME2 LINE L1 5364 5575 -2210 553 169 0 0 chr5 7101155 7101238 -192528912 + AluJ/FLAM SINE Alu 2 84 -228 282 256 156 11 chr5 7101238 7101328 -192528822 + L1ME2 LINE L1 5573 5675 -489 1670 221 56 25 chr5 7101472 7101921 -192528229 + L1ME2 LINE L1 5683 6145 -19 2092 164 62 34 chr5 7102308 7102724 -192527426 - MSTA LTR MaLR 0 428 1 1422 236 15 18 chr5 7102747 7103141 -192527009 + Charlie1b DNA MER1_type 2 394 -129 26 30 0 0 chr5 7103141 7103174 -192526976 + AT_rich Low_complexity Low_complexity 1 33 0 306 291 47 47 chr5 7103419 7103591 -192526559 + MIR SINE MIR 47 218 -44 201 206 175 16 chr5 7103801 7103864 -192526286 + L2 LINE L2 3200 3272 0 21 57 0 0 chr5 7104147 7104182 -192525968 + AT_rich Low_complexity Low_complexity 1 35 0 2008 186 49 3 chr5 7105858 7106207 -192523943 - MLT1A1 LTR MaLR 0 365 1 189 141 41 59 chr5 7106265 7106435 -192523715 + (TTATA)n Simple_repeat Simple_repeat 3 169 0 * 273 118 87 6 chr5 7106404 7106565 -192523585 + (TA)n Simple_repeat Simple_repeat 1 174 0 28 29 0 0 chr5 7106635 7106670 -192523480 + AT_rich Low_complexity Low_complexity 1 35 0 1631 202 74 3 chr5 7107246 7107583 -192522567 + MLT1A1 LTR MaLR 4 364 -1 1342 241 126 38 chr5 7107932 7107998 -192522152 - MLT1D LTR MaLR 0 626 567 1895 94 0 4 chr5 7107998 7108242 -192521908 + AluSq SINE Alu 1 243 -70 1342 241 126 38 chr5 7108242 7108740 -192521410 - MLT1D LTR MaLR -59 567 4 485 117 64 0 chr5 7109479 7109573 -192520577 - L1MA8 LINE L1 -101 6190 6091 571 173 9 0 chr5 7109573 7109667 -192520483 + L1MA8 LINE L1 6179 6289 -2 252 322 9 0 chr5 7109734 7109849 -192520301 + L1MCc LINE L1 1285 1400 -5023 572 223 81 39 chr5 7109858 7110183 -192519967 + MLT1F LTR MaLR 175 542 0 1238 249 36 42 chr5 7110183 7110661 -192519489 + L1ME3A LINE L1 5646 6120 -50 4641 175 111 32 chr5 7112535 7113612 -192516538 - MER52C LTR ERV1 0 1278 116 294 73 0 0 chr5 7114357 7114398 -192515752 + (CA)n Simple_repeat Simple_repeat 2 42 0 2040 148 35 27 chr5 7114760 7115132 -192515018 + THE1C LTR MaLR 1 375 0 402 317 7 21 chr5 7115649 7115791 -192514359 - L2 LINE L2 -1 3312 3173 1113 294 75 21 chr5 7115880 7116437 -192513713 - L2 LINE L2 -413 2901 2315 1285 268 26 52 chr5 7116444 7116907 -192513243 + MLT1C LTR MaLR 10 460 -7 565 283 143 7 chr5 7116921 7117214 -192512936 - L2 LINE L2 -1001 2313 1981 2088 204 20 32 chr5 7117233 7117675 -192512475 + MER70A LTR ERVL 36 472 0 259 284 128 0 chr5 7117752 7117861 -192512289 - L2 LINE L2 -1391 1923 1801 298 320 77 13 chr5 7117976 7118132 -192512018 + L2 LINE L2 2623 2788 -526 366 326 99 38 chr5 7118228 7118677 -192511473 + L1MD1 LINE L1 5269 5743 -419 * 618 225 8 0 chr5 7118654 7118783 -192511367 - L1M2 LINE L1 -494 5818 5689 769 180 0 0 chr5 7118783 7118914 -192511236 + L1MA9 LINE L1 6174 6312 0 303 296 11 0 chr5 7118918 7119006 -192511144 + L1MD1 LINE L1 6033 6121 -121 1323 138 0 0 chr5 7119006 7119195 -192510955 - AluSp SINE Alu -7 306 118 956 93 0 0 chr5 7119295 7119413 -192510737 - AluSq/x SINE Alu -194 118 1 609 197 8 15 chr5 7119413 7119545 -192510605 + L1MD1 LINE L1 6112 6242 0 301 233 19 58 chr5 7119620 7119723 -192510427 - HAL1 LINE L1 -1481 1026 928 625 274 96 15 chr5 7119984 7120254 -192509896 - HAL1 LINE L1 -2213 294 3 1866 196 2 45 chr5 7120266 7120663 -192509487 - MLT1B LTR MaLR -8 382 3 1615 180 39 29 chr5 7120979 7121285 -192508865 - AluJb SINE Alu -3 309 1 560 244 77 18 chr5 7121757 7121925 -192508225 - MER45A DNA AcHobo 0 178 1 2356 60 4 0 chr5 7123046 7123366 -192506784 + AluY SINE Alu 1 321 0 3280 149 39 6 chr5 7124063 7124573 -192505577 - MER1A DNA MER1_type 0 527 1 533 233 43 43 chr5 7125177 7125465 -192504685 + MLT1D LTR MaLR 128 505 0 468 218 0 15 chr5 7125989 7126107 -192504043 - L1MC4 LINE L1 -364 7631 7448 270 0 0 0 chr5 7126120 7126150 -192504000 + (TG)n Simple_repeat Simple_repeat 2 31 0 1695 211 124 63 chr5 7127361 7127935 -192502215 + MLT1E2 LTR MaLR 2 610 -16 2427 185 57 19 chr5 7130051 7130071 -192500079 - L1MC2 LINE L1 -1 6343 6325 2529 61 0 0 chr5 7130071 7130367 -192499783 - AluY SINE Alu -15 296 1 2427 185 57 19 chr5 7130367 7130877 -192499273 - L1MC2 LINE L1 -19 6325 5793 2029 145 0 0 chr5 7130887 7131184 -192498966 - AluSx SINE Alu -13 299 3 871 127 14 18 chr5 7131198 7131415 -192498735 - L1MC1 LINE L1 -271 6062 5698 2003 102 3 108 chr5 7132155 7132478 -192497672 + AluSq SINE Alu 1 289 -14 12936 206 14 17 chr5 7132636 7132683 -192497467 - L1PA15 LINE L1 -1 6164 6118 2053 144 0 0 chr5 7132683 7133024 -192497126 - AluSx SINE Alu 0 312 1 12936 206 14 17 chr5 7133024 7136398 -192493752 - L1PA15 LINE L1 -47 6118 2762 185 0 40 0 chr5 7136398 7136423 -192493727 + (TTG)n Simple_repeat Simple_repeat 2 27 0 12936 206 14 17 chr5 7136423 7136646 -192493504 - L1PA15 LINE L1 -3403 2762 2540 343 273 78 8 chr5 7137222 7137350 -192492800 - LTR50 LTR ERVL -160 635 499 263 298 142 60 chr5 7138004 7138306 -192491844 - HERVL LTR ERVL -255 5399 5073 1793 327 76 27 chr5 7138386 7139621 -192490529 - HERVL LTR ERVL -1234 4530 3157 488 89 40 20 chr5 7140279 7140380 -192489770 + GA-rich Low_complexity Low_complexity 3 105 0 848 110 6 33 chr5 7140380 7140562 -192489588 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 214 184 0 0 chr5 7140562 7140600 -192489550 + GA-rich Low_complexity Low_complexity 2 39 0 1220 207 70 14 chr5 7140606 7140891 -192489259 - MLT1C LTR MaLR 0 467 167 3634 204 44 47 chr5 7141534 7142450 -192487700 - L1MC3 LINE L1 0 7785 6873 1686 195 16 55 chr5 7142450 7142696 -192487454 - MLT1A1 LTR MaLR 0 365 138 1562 221 106 81 chr5 7142696 7143403 -192486747 - LTR8A LTR ERV1 -2 725 1 1686 195 16 55 chr5 7143403 7143536 -192486614 - MLT1A1 LTR MaLR -227 138 1 1170 203 68 17 chr5 7143536 7143831 -192486319 - L1MC3 LINE L1 -936 6849 6540 2948 145 134 0 chr5 7143867 7144391 -192485759 - LTR29 LTR ERV1 -28 594 1 5127 191 55 6 chr5 7144391 7145437 -192484713 - L1MC3 LINE L1 -1242 6543 5446 2738 29 0 0 chr5 7145440 7145751 -192484399 - AluYa5 SINE Alu 0 311 1 226 161 54 54 chr5 7146710 7146766 -192483384 - MLT1-int LTR MaLR -1311 60 5 245 315 69 22 chr5 7147187 7147377 -192482773 - MIR3 SINE MIR -46 216 15 2390 251 63 12 chr5 7148785 7149390 -192480760 - MER92B LTR ERV1 0 636 1 277 297 78 16 chr5 7150651 7150779 -192479371 - L1MDa LINE L1 -4840 1700 1565 2116 229 109 24 chr5 7150931 7151599 -192478551 + MER50 LTR ERV1 10 734 0 2836 189 34 11 chr5 7152001 7152055 -192478095 + MER44D DNA MER2_type 2 53 -2434 4202 97 51 14 chr5 7152055 7152643 -192477507 - MER4B LTR ERV1 0 610 1 2836 189 34 11 chr5 7152643 7153123 -192477027 + MER44D DNA MER2_type 53 603 -2 217 0 0 0 chr5 7153849 7153873 -192476277 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 2237 81 0 11 chr5 7153873 7154156 -192475994 - AluSc SINE Alu -29 280 1 1324 206 4 0 chr5 7155279 7155517 -192474633 - AluJb SINE Alu -73 239 1 622 300 65 20 chr5 7156372 7156619 -192473531 + LTR16B LTR ERVL 196 453 -11 284 312 76 62 chr5 7156946 7157683 -192472467 + L2 LINE L2 2303 3051 -221 342 0 0 0 chr5 7157734 7157772 -192472378 + (TG)n Simple_repeat Simple_repeat 2 39 0 1809 109 0 115 chr5 7157772 7158094 -192472056 - AluSx SINE Alu -27 285 1 399 236 6 51 chr5 7158772 7158950 -192471200 + (TATATG)n Simple_repeat Simple_repeat 4 173 0 1137 257 152 26 chr5 7159438 7159780 -192470370 + MLT1E LTR MaLR 75 459 -134 547 157 0 0 chr5 7159913 7159996 -192470154 + AluS SINE Alu 2 84 -229 3526 131 28 30 chr5 7160796 7161397 -192468753 + MER4A LTR ERV1 1 600 0 21 57 0 0 chr5 7161526 7161561 -192468589 + AT_rich Low_complexity Low_complexity 1 35 0 279 232 0 0 chr5 7162106 7162162 -192467988 + LTR33 LTR ERVL 77 132 -389 2657 110 3 3 chr5 7162316 7162680 -192467470 + THE1B LTR MaLR 1 364 0 246 261 33 11 chr5 7162710 7162802 -192467348 + LTR33 LTR ERVL 397 490 -31 218 342 7 40 chr5 7162804 7162953 -192467197 - MIR SINE MIR -59 203 60 258 325 162 0 chr5 7163677 7163794 -192466356 - L2 LINE L2 -15 3257 3122 2502 91 0 0 chr5 7165389 7165697 -192464453 + AluSx SINE Alu 1 308 -4 784 308 115 16 chr5 7166067 7166512 -192463638 + LTR33 LTR ERVL 24 512 -9 1584 206 41 15 chr5 7168028 7168367 -192461783 - MER7A DNA MER2_type 0 346 1 234 91 0 0 chr5 7168553 7168586 -192461564 + (TA)n Simple_repeat Simple_repeat 2 34 0 180 0 0 0 chr5 7168639 7168659 -192461491 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 480 48 0 0 chr5 7168658 7168721 -192461429 + (GA)n Simple_repeat Simple_repeat 2 64 0 1527 234 105 18 chr5 7170484 7170942 -192459208 - MLT1D LTR MaLR 0 505 8 409 255 56 87 chr5 7170968 7171199 -192458951 + MLT1K LTR MaLR 328 551 -37 23 0 0 0 chr5 7171854 7171877 -192458273 + AT_rich Low_complexity Low_complexity 1 23 0 2140 117 0 0 chr5 7172490 7172817 -192457333 + AluSx SINE Alu 1 327 0 224 269 10 0 chr5 7173012 7173116 -192457034 + (TG)n Simple_repeat Simple_repeat 2 106 0 841 239 50 18 chr5 7173464 7173682 -192456468 - MLT1B LTR MaLR 0 390 166 507 157 21 21 chr5 7173684 7173824 -192456326 + CT-rich Low_complexity Low_complexity 1 140 0 1053 140 0 0 chr5 7173830 7174008 -192456142 + (TTC)n Simple_repeat Simple_repeat 3 180 0 236 267 0 0 chr5 7174017 7174077 -192456073 - FLAM SINE Alu -1 132 73 * 764 224 11 38 chr5 7174061 7174244 -192455906 - MLT1B LTR MaLR -211 179 2 2082 136 19 45 chr5 7174818 7175192 -192454958 + THE1B LTR MaLR 1 364 0 303 311 52 15 chr5 7175928 7176063 -192454087 + MIR SINE MIR 25 164 -98 233 263 84 66 chr5 7176154 7176367 -192453783 + L1MC1 LINE L1 3895 4111 -2035 383 205 18 35 chr5 7177134 7177369 -192452781 + (TATAA)n Simple_repeat Simple_repeat 1 230 0 228 217 29 0 chr5 7177342 7177411 -192452739 + T-rich Low_complexity Low_complexity 1 71 0 * 23 54 0 0 chr5 7177440 7177477 -192452673 + AT_rich Low_complexity Low_complexity 1 37 0 5354 203 15 16 chr5 7177672 7178675 -192451475 + L1MC1 LINE L1 4819 5821 -512 432 37 0 0 chr5 7178675 7178729 -192451421 + (CA)n Simple_repeat Simple_repeat 1 54 0 5354 203 15 16 chr5 7178729 7178877 -192451273 + L1MC1 LINE L1 5821 5968 -365 2022 152 3 0 chr5 7178877 7179186 -192450964 + AluSx SINE Alu 1 310 -2 5354 203 15 16 chr5 7179186 7179550 -192450600 + L1MC1 LINE L1 5968 6333 0 541 240 25 75 chr5 7179634 7179757 -192450393 + MIR SINE MIR 73 184 -78 2115 128 0 16 chr5 7179757 7180061 -192450089 - AluSx SINE Alu -13 299 1 541 240 25 75 chr5 7180061 7180137 -192450013 + MIR SINE MIR 184 262 0 2051 128 25 0 chr5 7180945 7181226 -192448924 + AluSg SINE Alu 5 292 -18 210 118 0 0 chr5 7181697 7181731 -192448419 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 263 191 176 69 chr5 7181732 7181863 -192448287 + L1ME4a LINE L1 5947 6091 -30 185 105 0 26 chr5 7182494 7182532 -192447618 + (TA)n Simple_repeat Simple_repeat 1 37 0 1473 91 21 45 chr5 7182671 7182914 -192447236 + L1PA5 LINE L1 5918 6154 0 186 189 0 0 chr5 7184256 7184293 -192445857 + (CAT)n Simple_repeat Simple_repeat 2 38 0 236 184 207 23 chr5 7184465 7184552 -192445598 + MIR SINE MIR 52 154 -108 816 271 45 16 chr5 7185473 7185842 -192444308 + L1ME LINE L1 498 873 -5197 680 191 58 143 chr5 7187883 7188027 -192442123 - MLT1B LTR MaLR -122 268 160 2192 129 36 33 chr5 7188027 7188390 -192441760 + THE1B LTR MaLR 1 364 0 680 191 58 143 chr5 7188390 7188538 -192441612 - MLT1B LTR MaLR -230 160 1 294 176 22 11 chr5 7189118 7189209 -192440941 + (CA)n Simple_repeat Simple_repeat 2 93 0 508 303 59 17 chr5 7189572 7189810 -192440340 - LTR16C LTR ERVL -94 397 150 1297 163 0 5 chr5 7189889 7190098 -192440052 + AluJb SINE Alu 86 293 -19 216 135 0 0 chr5 7190112 7190149 -192440001 + (CA)n Simple_repeat Simple_repeat 2 38 0 3103 140 45 18 chr5 7190384 7190935 -192439215 + L1MB3 LINE L1 5618 6183 0 198 305 17 0 chr5 7191862 7191921 -192438229 + L2 LINE L2 3249 3308 -5 1929 104 107 7 chr5 7195202 7195482 -192434668 + AluSx SINE Alu 1 308 -4 766 235 6 0 chr5 7196364 7196526 -192433624 - MLT1E2 LTR MaLR -6 499 337 1152 235 34 53 chr5 7196576 7196954 -192433196 + MLT1C LTR MaLR 97 467 0 1026 226 65 62 chr5 7196971 7197307 -192432843 - MLT1E2 LTR MaLR -289 337 1 199 307 150 13 chr5 7197710 7197863 -192432287 - L2 LINE L2 -222 3050 2877 673 122 9 0 chr5 7198086 7198193 -192431957 + MER50 LTR ERV1 497 604 -130 907 249 128 21 chr5 7200651 7200980 -192429170 - MLT1D LTR MaLR -6 499 136 599 148 9 19 chr5 7201100 7201208 -192428942 - MLT2C2 LTR ERVL -357 107 1 1441 240 58 17 chr5 7201962 7202379 -192427771 + MLT1C LTR MaLR 1 434 -33 1332 115 0 6 chr5 7202391 7202573 -192427577 - AluSq SINE Alu -132 181 1 2078 119 0 7 chr5 7203361 7203654 -192426496 + AluSx SINE Alu 1 291 -21 23 54 0 0 chr5 7204174 7204211 -192425939 + AT_rich Low_complexity Low_complexity 1 37 0 309 206 39 59 chr5 7204225 7204327 -192425823 + MIR3 SINE MIR 86 185 -23 456 339 5 16 chr5 7205140 7205332 -192424818 - MIR SINE MIR -29 233 44 287 269 0 0 chr5 7206002 7206069 -192424081 + CT-rich Low_complexity Low_complexity 2 68 0 703 152 51 0 chr5 7207881 7208019 -192422131 + L1MA5 LINE L1 6155 6299 -1 3106 141 65 6 chr5 7208162 7208652 -192421498 - LTR44 LTR ERV1 0 519 1 3097 77 8 2 chr5 7208819 7209221 -192420929 + MLT2A1 LTR ERVL 1 404 -40 648 173 0 0 chr5 7209232 7209382 -192420768 + (TA)n Simple_repeat Simple_repeat 1 150 0 231 140 0 88 chr5 7209405 7209462 -192420688 + LTR66 LTR ERVL 398 449 -161 * 327 98 59 0 chr5 7209445 7209496 -192420654 + MLT2A1 LTR ERVL 391 444 0 273 119 0 0 chr5 7209973 7210015 -192420135 + (TG)n Simple_repeat Simple_repeat 1 42 0 279 54 0 0 chr5 7210474 7210511 -192419639 + (TG)n Simple_repeat Simple_repeat 1 37 0 1555 113 8 8 chr5 7210718 7210957 -192419193 - MER57B LTR ERV1 0 434 196 24 0 0 0 chr5 7211227 7211251 -192418899 + AT_rich Low_complexity Low_complexity 1 24 0 1399 122 15 5 chr5 7211293 7211498 -192418652 - MER57B LTR ERV1 -227 207 1 1746 195 57 3 chr5 7211708 7212026 -192418124 + MLT1A1 LTR MaLR 9 343 -22 594 144 33 0 chr5 7212193 7212283 -192417867 + FLAM_A SINE Alu 32 124 -18 2338 106 6 3 chr5 7213390 7213701 -192416449 - AluSx SINE Alu 0 312 1 252 100 0 0 chr5 7214948 7214988 -192415162 + (TA)n Simple_repeat Simple_repeat 2 41 0 374 250 23 0 chr5 7214992 7215080 -192415070 + L1MC4 LINE L1 6614 6703 -1339 247 198 0 62 chr5 7215086 7215182 -192414968 + L1MC4 LINE L1 6614 6703 -1339 392 232 21 42 chr5 7215184 7215344 -192414806 + L1MC3 LINE L1 6526 6703 -1139 385 184 0 82 chr5 7215326 7215424 -192414726 + L1MC4 LINE L1 6614 6703 -1339 * 210 171 0 0 chr5 7215428 7215469 -192414681 + (TA)n Simple_repeat Simple_repeat 2 42 0 2601 200 16 40 chr5 7215486 7215522 -192414628 - MLT2B3 LTR ERVL -15 539 504 954 46 46 17 chr5 7215522 7215697 -192414453 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2601 200 16 40 chr5 7215697 7216204 -192413946 - MLT2B3 LTR ERVL -50 504 9 229 297 33 11 chr5 7217998 7218089 -192412061 + MLT1A1 LTR MaLR 457 549 0 23 0 0 0 chr5 7218462 7218485 -192411665 + AT_rich Low_complexity Low_complexity 1 23 0 306 0 0 0 chr5 7219035 7219069 -192411081 + (TG)n Simple_repeat Simple_repeat 1 34 0 201 178 22 0 chr5 7220822 7220867 -192409283 - L2 LINE L2 0 3313 3268 1664 184 23 26 chr5 7221471 7221781 -192408369 - AluJo SINE Alu -3 309 1 21 36 0 0 chr5 7223974 7224002 -192406148 + AT_rich Low_complexity Low_complexity 1 28 0 1609 135 54 0 chr5 7224937 7225196 -192404954 + AluSx SINE Alu 40 312 0 298 294 28 18 chr5 7225292 7225401 -192404749 - MER94 DNA DNA -22 112 3 323 118 20 0 chr5 7225495 7225546 -192404604 + MLT1A1 LTR MaLR 1 52 -313 254 250 7 0 chr5 7226231 7226383 -192403767 + (TG)n Simple_repeat Simple_repeat 2 154 0 24 0 0 0 chr5 7227660 7227684 -192402466 + AT_rich Low_complexity Low_complexity 1 24 0 1114 219 16 27 chr5 7228067 7228323 -192401827 - L1MB5 LINE L1 -297 5877 5625 * 1164 221 31 7 chr5 7228322 7228627 -192401523 + L1MB5 LINE L1 5867 6180 0 12608 176 22 8 chr5 7228899 7230244 -192399906 + L1PB3 LINE L1 2633 3957 -2197 1962 138 10 3 chr5 7230244 7230540 -192399610 + AluSg SINE Alu 1 298 -12 12608 176 22 8 chr5 7230540 7230945 -192399205 + L1PB3 LINE L1 3957 4355 -1799 230 29 59 0 chr5 7230945 7230979 -192399171 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 12608 176 22 8 chr5 7230979 7232699 -192397451 + L1PB3 LINE L1 4355 6154 0 1798 138 64 3 chr5 7233981 7234264 -192395886 + AluJb SINE Alu 1 300 -12 274 275 58 7 chr5 7234503 7234697 -192395453 + (TCTA)n Simple_repeat Simple_repeat 1 203 0 1369 214 206 3 chr5 7234814 7235192 -192394958 + MLT2B2 LTR ERVL 1 455 -60 345 24 0 0 chr5 7235195 7235237 -192394913 + (CA)n Simple_repeat Simple_repeat 2 43 0 270 285 51 15 chr5 7235252 7235389 -192394761 + MIR SINE MIR 81 222 -40 36 53 0 0 chr5 7235522 7235579 -192394571 + AT_rich Low_complexity Low_complexity 1 57 0 1627 90 36 0 chr5 7235708 7235930 -192394220 - L1PA10 LINE L1 -4 6164 5935 33 56 0 0 chr5 7236063 7236117 -192394033 + AT_rich Low_complexity Low_complexity 1 54 0 21 57 0 0 chr5 7236148 7236183 -192393967 + AT_rich Low_complexity Low_complexity 1 35 0 2470 124 3 0 chr5 7237546 7237893 -192392257 + L1PA13 LINE L1 5802 6149 -14 3080 169 78 31 chr5 7238586 7238937 -192391213 - MER7C DNA MER2_type -2426 602 212 188 67 33 0 chr5 7238937 7238967 -192391183 + (TGAG)n Simple_repeat Simple_repeat 4 34 0 3080 169 78 31 chr5 7238967 7239190 -192390960 - MER7C DNA MER2_type -2816 212 1 512 307 88 47 chr5 7239191 7239614 -192390536 - LTR33 LTR ERVL -77 444 5 818 163 43 22 chr5 7239997 7240181 -192389969 + MER53 DNA DNA 2 189 0 1200 293 84 42 chr5 7240407 7240640 -192389510 - L2 LINE L2 0 3313 3091 2244 116 0 0 chr5 7240640 7240943 -192389207 - AluSq SINE Alu 0 313 11 1200 293 84 42 chr5 7240943 7241786 -192388364 - L2 LINE L2 -222 3091 2201 1204 275 44 6 chr5 7241792 7242112 -192388038 - LTR16A LTR ERVL -3 447 116 1910 181 3 0 chr5 7242223 7242532 -192387618 - AluSx SINE Alu -2 310 1 2304 109 7 0 chr5 7242550 7242854 -192387296 - AluSg SINE Alu -4 306 1 386 340 42 50 chr5 7242868 7243130 -192387020 + L2 LINE L2 1148 1407 -1907 3497 229 95 19 chr5 7244438 7245628 -192384522 - L1M4 LINE L1 -821 5325 4045 418 303 152 28 chr5 7252972 7253262 -192376888 - L2 LINE L2 -945 2369 2044 372 278 12 29 chr5 7253459 7253632 -192376518 + (CATG)n Simple_repeat Simple_repeat 2 171 0 331 240 10 83 chr5 7253660 7253852 -192376298 + (CATG)n Simple_repeat Simple_repeat 2 179 0 242 315 89 41 chr5 7254527 7254819 -192375331 + L1MC/D LINE L1 4474 4779 -1367 283 285 73 28 chr5 7255289 7255468 -192374682 + L1MC/D LINE L1 5314 5500 -2308 963 206 77 111 chr5 7255826 7256278 -192373872 + MLT1D LTR MaLR 69 505 0 239 189 38 0 chr5 7256735 7256788 -192373362 - MLT1K LTR MaLR -20 568 514 459 131 0 30 chr5 7257083 7257182 -192372968 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 24 0 0 0 chr5 7257574 7257598 -192372552 + AT_rich Low_complexity Low_complexity 1 24 0 360 64 0 0 chr5 7257631 7257678 -192372472 + (TA)n Simple_repeat Simple_repeat 1 47 0 1944 48 0 36 chr5 7257678 7257921 -192372229 - AluY SINE Alu -14 297 64 409 276 92 54 chr5 7258078 7258804 -192371346 - L1MEd LINE L1 -4613 1516 771 654 328 131 30 chr5 7259426 7259953 -192370197 + L2 LINE L2 2464 3049 -223 2191 78 14 4 chr5 7260605 7260886 -192369264 - AluSp SINE Alu -29 284 1 1203 130 27 0 chr5 7262054 7262239 -192367911 - L1PA15 LINE L1 -21 6144 5955 11639 214 17 30 chr5 7262239 7263774 -192366376 - L1P LINE L1 -913 5233 3748 1968 130 0 14 chr5 7263774 7264110 -192366040 - AluY SINE Alu 0 332 1 11639 214 17 30 chr5 7264110 7265342 -192364808 - L1P LINE L1 -2398 3748 2501 4857 216 23 15 chr5 7265345 7267166 -192362984 + L1P LINE L1 1326 3159 -3638 249 180 0 0 chr5 7267247 7267297 -192362853 + (CATA)n Simple_repeat Simple_repeat 2 51 0 643 294 150 25 chr5 7267923 7268720 -192361430 - L2 LINE L2 0 3313 2360 23 0 0 0 chr5 7270373 7270396 -192359754 + AT_rich Low_complexity Low_complexity 1 23 0 2281 108 0 0 chr5 7270529 7270834 -192359316 - AluSq SINE Alu -8 305 1 250 318 55 46 chr5 7271382 7271569 -192358581 - MIR SINE MIR -67 141 9 180 286 71 12 chr5 7273343 7273427 -192356723 - MIR SINE MIR -77 185 97 269 218 0 69 chr5 7273474 7273561 -192356589 + L1MC4 LINE L1 6641 6721 -1321 217 135 27 0 chr5 7273789 7273826 -192356324 + GA-rich Low_complexity Low_complexity 2 39 0 21 57 0 0 chr5 7274085 7274120 -192356030 + AT_rich Low_complexity Low_complexity 1 35 0 459 270 149 66 chr5 7274669 7275151 -192354999 - LTR33A LTR ERVL -1 522 1 259 179 18 0 chr5 7275940 7275996 -192354154 - LTR33A LTR ERVL 0 523 467 560 77 188 51 chr5 7276391 7276409 -192353741 - L1MA7 LINE L1 -3 6288 6274 2056 132 48 38 chr5 7276409 7276780 -192353370 + THE1C LTR MaLR 1 375 0 560 77 188 51 chr5 7276780 7276878 -192353272 - L1MA7 LINE L1 -17 6274 6156 485 333 101 16 chr5 7276883 7277201 -192352949 + MLT1L LTR MaLR 227 571 -44 402 21 0 0 chr5 7277864 7277911 -192352239 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1805 142 0 0 chr5 7277916 7278169 -192351981 - AluSx SINE Alu -59 253 1 1887 129 30 23 chr5 7278169 7278472 -192351678 - AluSx SINE Alu -7 305 1 189 375 116 0 chr5 7278516 7278628 -192351522 - L2 LINE L2 -22 3250 3126 2411 169 0 5 chr5 7279124 7279491 -192350659 + MLT1A1 LTR MaLR 1 365 0 2982 199 90 55 chr5 7279702 7280500 -192349650 - LTR1B LTR ERV1 0 826 1 304 130 0 0 chr5 7280885 7280931 -192349219 + MADE1 DNA Mariner 35 80 0 974 258 97 52 chr5 7281207 7281645 -192348505 - MLT1C LTR MaLR 0 467 5 1586 199 38 0 chr5 7281713 7281882 -192348268 - AluJo SINE Alu -14 298 112 198 0 0 0 chr5 7281882 7281904 -192348246 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1586 199 38 0 chr5 7281904 7282021 -192348129 - AluJo SINE Alu -200 112 1 202 264 128 111 chr5 7283460 7283813 -192346337 + L2 LINE L2 2560 2918 -396 587 207 8 0 chr5 7284135 7284256 -192345894 + MSTD LTR MaLR 275 396 0 244 263 132 9 chr5 7284258 7284372 -192345778 - HAL1 LINE L1 -1104 1403 1276 1251 246 153 25 chr5 7284387 7284826 -192345324 - MLT1D LTR MaLR -8 497 3 251 242 207 60 chr5 7284930 7285171 -192344979 - HAL1 LINE L1 -1334 1173 874 195 42 0 0 chr5 7285171 7285195 -192344955 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 251 242 207 60 chr5 7285195 7285267 -192344883 - HAL1 LINE L1 -1633 874 814 2034 39 0 0 chr5 7285443 7285673 -192344477 + L1PA5 LINE L1 5922 6151 -3 187 348 130 36 chr5 7286154 7286292 -192343858 + L2 LINE L2 3118 3268 -4 670 120 0 0 chr5 7286448 7286548 -192343602 + AluSg/x SINE Alu 208 307 -5 469 113 0 0 chr5 7287530 7287592 -192342558 - AluJ/FLAM SINE Alu -250 62 1 1510 267 100 28 chr5 7287606 7288542 -192341608 - L1MEd LINE L1 -3013 3116 2113 360 64 0 0 chr5 7288894 7288941 -192341209 + (TA)n Simple_repeat Simple_repeat 1 47 0 2036 47 0 28 chr5 7288941 7289196 -192340954 - AluY SINE Alu 0 311 64 421 281 90 53 chr5 7289352 7290092 -192340058 - L1MEd LINE L1 -4613 1516 756 478 211 8 29 chr5 7291563 7291812 -192338338 + CT-rich Low_complexity Low_complexity 1 243 0 559 163 11 0 chr5 7292158 7292250 -192337900 - MLT2B3 LTR ERVL -227 327 235 326 220 10 0 chr5 7292264 7292364 -192337786 + GA-rich Low_complexity Low_complexity 2 102 0 1370 170 13 9 chr5 7292364 7292594 -192337556 - MLT2B3 LTR ERVL -323 231 1 353 182 26 0 chr5 7292922 7292999 -192337151 + MER116 DNA Mariner 1 79 -1 2070 115 4 4 chr5 7294212 7294304 -192335846 - AluSc SINE Alu 0 395 304 198 0 0 0 chr5 7294304 7294326 -192335824 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2070 115 4 4 chr5 7294326 7294607 -192335543 - AluSc SINE Alu -90 305 1 358 299 0 9 chr5 7295373 7295480 -192334670 + MIR3 SINE MIR 87 192 -16 196 250 90 20 chr5 7296192 7296292 -192333858 + L2 LINE L2 3045 3151 -162 183 245 20 0 chr5 7296485 7296534 -192333616 + L3b LINE CR1 1306 1355 -228 567 299 127 21 chr5 7297232 7297523 -192332627 + L2 LINE L2 2992 3313 0 272 217 0 12 chr5 7301787 7301870 -192328280 + CT-rich Low_complexity Low_complexity 4 85 0 1952 157 7 0 chr5 7305335 7305640 -192324510 + AluSx SINE Alu 1 307 -5 543 301 36 18 chr5 7306198 7306417 -192323733 + LTR16C LTR ERVL 269 491 0 223 239 22 43 chr5 7306501 7306593 -192323557 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 360 0 0 0 chr5 7307433 7307473 -192322677 + (TG)n Simple_repeat Simple_repeat 2 41 0 327 289 67 21 chr5 7308333 7308527 -192321623 + LTR33 LTR ERVL 15 217 -304 1903 153 20 0 chr5 7309535 7309830 -192320320 - AluSx SINE Alu -11 301 1 182 269 60 104 chr5 7310438 7310572 -192319578 - L2 LINE L2 -436 2878 2751 2418 75 0 0 chr5 7310888 7311180 -192318970 + AluY SINE Alu 1 292 -19 3783 119 6 24 chr5 7311342 7311879 -192318271 + MER1A DNA MER1_type 1 527 0 27 81 0 0 chr5 7312042 7312104 -192318046 + AT_rich Low_complexity Low_complexity 1 62 0 214 191 0 0 chr5 7312420 7312462 -192317688 + (TTA)n Simple_repeat Simple_repeat 1 42 0 808 287 69 28 chr5 7312641 7312684 -192317466 + MLT1I LTR MaLR 2 42 -367 189 0 0 0 chr5 7312684 7312705 -192317445 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 808 287 69 28 chr5 7312705 7313051 -192317099 + MLT1I LTR MaLR 42 407 -2 282 73 0 0 chr5 7313158 7313199 -192316951 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 393 291 89 58 chr5 7313297 7313610 -192316540 + L1ME4a LINE L1 5625 5947 -174 24 67 0 0 chr5 7313711 7313756 -192316394 + AT_rich Low_complexity Low_complexity 1 45 0 321 303 35 64 chr5 7314397 7314711 -192315439 + L1MC/D LINE L1 3849 4153 -1993 210 211 0 28 chr5 7314882 7314953 -192315197 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 188 176 28 28 chr5 7314956 7315064 -192315086 + (TTATA)n Simple_repeat Simple_repeat 5 112 0 244 326 82 31 chr5 7315153 7315444 -192314706 + L1MC/D LINE L1 4474 4779 -1367 633 329 74 18 chr5 7315914 7316358 -192313792 + L1MC/D LINE L1 5314 5782 -2026 26 30 0 0 chr5 7316761 7316794 -192313356 + AT_rich Low_complexity Low_complexity 1 33 0 2784 105 13 8 chr5 7317362 7317735 -192312415 + THE1C LTR MaLR 1 375 0 243 226 204 11 chr5 7318492 7318585 -192311565 + L2 LINE L2 3201 3311 -2 270 0 0 0 chr5 7318653 7318683 -192311467 + (TG)n Simple_repeat Simple_repeat 2 31 0 2753 115 0 10 chr5 7319861 7320245 -192309905 + MLT2A2 LTR ERVL 1 380 -73 324 167 12 24 chr5 7320245 7320329 -192309821 + (TATATG)n Simple_repeat Simple_repeat 5 87 0 408 19 38 0 chr5 7320329 7320382 -192309768 + MLT2A2 LTR ERVL 399 453 0 265 319 88 0 chr5 7320973 7321064 -192309086 - MLT1I LTR MaLR -173 236 138 1565 308 108 41 chr5 7321333 7322317 -192307833 + L2 LINE L2 1971 3020 -293 1581 251 52 34 chr5 7322318 7322876 -192307274 - L1MEc LINE L1 -3322 2893 2326 1411 111 0 5 chr5 7322876 7323074 -192307076 - AluSg/x SINE Alu 0 310 114 2396 64 3 22 chr5 7323202 7323513 -192306637 + AluY SINE Alu 1 305 -6 1499 150 75 4 chr5 7323520 7323773 -192306377 + AluSx SINE Alu 1 271 -41 502 167 0 12 chr5 7323789 7323873 -192306277 + AluSg/x SINE Alu 210 292 -20 735 274 89 35 chr5 7323877 7324395 -192305755 - L1MEc LINE L1 -4536 1860 1315 1751 149 0 31 chr5 7324406 7324757 -192305393 - AluSg SINE Alu 0 342 1 577 239 28 35 chr5 7324821 7324963 -192305187 - L1MEc LINE L1 -5825 571 431 375 234 16 81 chr5 7325085 7325209 -192304941 + L2 LINE L2 3198 3313 0 291 311 82 67 chr5 7328420 7328690 -192301460 - L3 LINE CR1 -701 876 603 21 0 0 0 chr5 7328959 7328980 -192301170 + AT_rich Low_complexity Low_complexity 1 21 0 1329 199 17 24 chr5 7329702 7329999 -192300151 + AluJo SINE Alu 1 295 -17 1166 247 150 71 chr5 7331360 7331934 -192298216 - MLT1E2 LTR MaLR -2 624 6 197 289 96 19 chr5 7332554 7332658 -192297492 + L3 LINE CR1 1465 1576 -1 327 177 0 0 chr5 7334219 7334281 -192295869 + GA-rich Low_complexity Low_complexity 2 63 0 559 203 27 27 chr5 7335160 7335308 -192294842 - LTR67 LTR ERVL -3 554 407 180 0 0 0 chr5 7335598 7335618 -192294532 + (A)n Simple_repeat Simple_repeat 1 20 0 218 311 0 0 chr5 7335644 7335689 -192294461 + L2 LINE L2 3139 3183 -89 282 189 11 67 chr5 7336748 7336838 -192293312 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 257 277 71 45 chr5 7336975 7337130 -192293020 - MIR3 SINE MIR 0 208 50 1526 194 0 7 chr5 7338699 7339007 -192291143 - AluJb SINE Alu 0 306 1 306 173 29 0 chr5 7340449 7340598 -192289552 + (TA)n Simple_repeat Simple_repeat 1 153 0 185 0 40 0 chr5 7342111 7342136 -192288014 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 2298 78 3 3 chr5 7342153 7342437 -192287713 - AluSp SINE Alu -29 284 1 2305 82 0 0 chr5 7343235 7343516 -192286634 + AluY SINE Alu 1 281 -30 225 65 0 0 chr5 7343519 7343550 -192286600 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 703 244 153 41 chr5 7345285 7345444 -192284706 + MLT1F1 LTR MaLR 2 142 -400 1757 142 36 33 chr5 7345444 7345775 -192284375 + L1MA4A LINE L1 5966 6297 -6 703 244 153 41 chr5 7345775 7346113 -192284037 + MLT1F1 LTR MaLR 142 541 -1 377 274 17 28 chr5 7346528 7346707 -192283443 + (CATG)n Simple_repeat Simple_repeat 2 178 0 1187 331 141 14 chr5 7346900 7347568 -192282582 + L2 LINE L2 2044 2796 -518 4384 112 8 16 chr5 7348213 7348830 -192281320 + MER51A LTR ERV1 23 634 0 225 172 78 16 chr5 7350060 7350124 -192280026 - LTR13 LTR ERVK -292 715 648 903 205 58 99 chr5 7350457 7350534 -192279616 - L1MC5 LINE L1 -725 7236 7157 2486 78 0 0 chr5 7350534 7350840 -192279310 + AluY SINE Alu 1 306 -5 903 205 58 99 chr5 7350840 7351157 -192278993 - L1MC5 LINE L1 -804 7157 6858 468 277 15 0 chr5 7351239 7351369 -192278781 - L1MC5 LINE L1 -1132 6829 6698 243 223 62 77 chr5 7351368 7351498 -192278652 - HAL1 LINE L1 -159 2348 2221 * 1323 154 0 5 chr5 7351578 7351792 -192278358 - AluSg/x SINE Alu -13 297 85 1671 266 196 42 chr5 7351800 7353377 -192276773 - HAL1 LINE L1 -438 2069 250 186 298 12 48 chr5 7353714 7353798 -192276352 + L2 LINE L2 3233 3313 0 588 157 50 41 chr5 7354354 7354475 -192275675 + MLT1A2 LTR MaLR 199 320 -54 1707 236 25 9 chr5 7354630 7355021 -192275129 + MSTD LTR MaLR 9 396 0 271 273 30 20 chr5 7355584 7355683 -192274467 + L3 LINE CR1 1059 1158 -419 24 32 0 0 chr5 7356587 7356618 -192273532 + AT_rich Low_complexity Low_complexity 1 31 0 10175 227 69 31 chr5 7360200 7364585 -192265565 - L1MB8 LINE L1 -12 6977 2471 366 107 0 0 chr5 7364780 7364836 -192265314 + (TG)n Simple_repeat Simple_repeat 2 57 0 5571 236 72 38 chr5 7364839 7365362 -192264788 - L1MB8 LINE L1 -4607 2352 1848 2201 104 3 0 chr5 7365362 7365659 -192264491 - AluSc SINE Alu -11 298 1 5571 236 72 38 chr5 7365659 7366705 -192263445 - L1MB8 LINE L1 -5111 1848 683 315 0 0 0 chr5 7366705 7366740 -192263410 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5571 236 72 38 chr5 7366740 7367434 -192262716 - L1MB8 LINE L1 -6276 683 14 345 248 90 28 chr5 7367859 7368004 -192262146 - MIR SINE MIR -48 214 61 2173 143 38 41 chr5 7368043 7368408 -192261742 + THE1B LTR MaLR 1 364 0 438 203 58 0 chr5 7370214 7370546 -192259604 + CT-rich Low_complexity Low_complexity 1 351 0 410 150 0 0 chr5 7370651 7370711 -192259439 + THE1B LTR MaLR 305 364 0 * 1240 161 187 22 chr5 7370711 7370973 -192259177 - MSTA LTR MaLR -122 306 1 185 283 0 0 chr5 7370998 7371044 -192259106 + L2 LINE L2 3210 3255 -17 195 42 0 0 chr5 7371044 7371068 -192259082 + (TTA)n Simple_repeat Simple_repeat 1 24 0 555 117 0 36 chr5 7371291 7371402 -192258748 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 314 182 0 0 chr5 7371705 7371760 -192258390 + MLT1K LTR MaLR 514 568 -20 1005 205 75 110 chr5 7372233 7372686 -192257464 - MLT1D LTR MaLR 0 505 69 295 291 51 17 chr5 7372954 7373173 -192256977 + L1M4 LINE L1 4234 4459 -1687 183 315 62 23 chr5 7373409 7373539 -192256611 + MIR SINE MIR 14 148 -114 21 36 0 0 chr5 7373716 7373744 -192256406 + AT_rich Low_complexity Low_complexity 1 28 0 1084 191 57 30 chr5 7374165 7374395 -192255755 - MER46A DNA MER2_type 0 236 1 1976 195 61 127 chr5 7374652 7375395 -192254755 + LTR8A LTR ERV1 34 727 0 600 295 62 62 chr5 7375426 7375830 -192254320 + L2 LINE L2 2809 3212 -101 417 291 35 62 chr5 7376037 7376295 -192253855 + LTR16B LTR ERVL 214 464 0 2079 170 101 0 chr5 7377506 7377894 -192252256 - MSTA LTR MaLR 0 428 2 1489 242 13 32 chr5 7378039 7378411 -192251739 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 7379053 7379075 -192251075 + AT_rich Low_complexity Low_complexity 1 22 0 1429 241 51 8 chr5 7380704 7381078 -192249072 + MLT1C LTR MaLR 3 392 -75 226 232 63 11 chr5 7381483 7381578 -192248572 + CT-rich Low_complexity Low_complexity 1 100 0 253 158 63 0 chr5 7381582 7381677 -192248473 + (CCCTG)n Simple_repeat Simple_repeat 2 102 0 508 107 63 60 chr5 7381710 7382146 -192248004 + CT-rich Low_complexity Low_complexity 1 437 0 1046 254 70 53 chr5 7383427 7383786 -192246364 + MLT1A1 LTR MaLR 1 365 0 2453 165 19 36 chr5 7383979 7384521 -192245629 - LTR27 LTR ERV1 0 501 3 182 330 124 0 chr5 7384551 7384648 -192245502 + MIR SINE MIR 38 146 -62 2784 153 39 37 chr5 7384680 7385032 -192245118 - L1MB3 LINE L1 -36 6147 5792 2223 115 0 0 chr5 7385032 7385336 -192244814 + AluSc SINE Alu 1 304 -5 2784 153 39 37 chr5 7385336 7385524 -192244626 - L1MB3 LINE L1 -391 5792 5606 229 323 96 0 chr5 7386125 7386323 -192243827 + L1M4 LINE L1 3762 3978 -2168 555 271 0 0 chr5 7386361 7386483 -192243667 + MIR SINE MIR 12 133 -129 1937 153 134 28 chr5 7386504 7386628 -192243522 - MSTA LTR MaLR 0 428 319 1902 144 76 51 chr5 7386628 7386983 -192243167 + THE1B LTR MaLR 1 364 0 1937 153 134 28 chr5 7386983 7387245 -192242905 - MSTA LTR MaLR -109 319 1 185 283 0 0 chr5 7387270 7387316 -192242834 + L2 LINE L2 3210 3255 -17 195 42 0 0 chr5 7387316 7387340 -192242810 + (TTA)n Simple_repeat Simple_repeat 1 24 0 555 117 0 36 chr5 7387563 7387674 -192242476 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 314 182 0 0 chr5 7387977 7388032 -192242118 + MLT1K LTR MaLR 514 568 -20 1092 212 77 90 chr5 7388505 7388948 -192241202 - MLT1D LTR MaLR 0 505 69 295 291 51 17 chr5 7389216 7389435 -192240715 + L1M4 LINE L1 4234 4459 -1687 183 315 62 23 chr5 7389670 7389800 -192240350 + MIR SINE MIR 14 148 -114 21 36 0 0 chr5 7389977 7390005 -192240145 + AT_rich Low_complexity Low_complexity 1 28 0 1098 187 57 30 chr5 7390426 7390656 -192239494 - MER46A DNA MER2_type 0 236 1 1974 196 65 128 chr5 7390913 7391654 -192238496 + LTR8A LTR ERV1 34 727 0 616 292 62 62 chr5 7391685 7392089 -192238061 + L2 LINE L2 2809 3212 -101 417 291 35 62 chr5 7392296 7392554 -192237596 + LTR16B LTR ERVL 214 464 0 2079 170 101 0 chr5 7393764 7394152 -192235998 - MSTA LTR MaLR 0 428 2 1517 239 13 32 chr5 7394297 7394669 -192235481 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 7395311 7395333 -192234817 + AT_rich Low_complexity Low_complexity 1 22 0 1465 235 51 8 chr5 7396959 7397333 -192232817 + MLT1C LTR MaLR 3 392 -75 2518 123 62 10 chr5 7397891 7398291 -192231859 - MSTA LTR MaLR -7 421 1 1253 223 56 68 chr5 7398411 7398875 -192231275 - MLT2D LTR ERVL -66 454 1 1455 182 78 4 chr5 7399073 7399342 -192230808 - AluJb SINE Alu -14 298 10 191 266 0 47 chr5 7400495 7400559 -192229591 + L2 LINE L2 3208 3268 -4 1619 177 67 0 chr5 7400604 7400887 -192229263 + AluJb SINE Alu 9 310 -2 327 322 11 0 chr5 7400950 7401040 -192229110 - MIR3 SINE MIR -43 165 75 200 293 88 66 chr5 7402728 7402909 -192227241 - L2 LINE L2 -96 3217 3033 508 347 82 48 chr5 7403559 7404172 -192225978 - L2 LINE L2 -784 2530 1887 1807 148 121 12 chr5 7404172 7404510 -192225640 + THE1C LTR MaLR 1 375 0 508 347 82 48 chr5 7404510 7404611 -192225539 - L2 LINE L2 -1427 1887 1791 322 260 52 0 chr5 7406276 7406372 -192223778 + MER5A DNA MER1_type 9 109 -80 28 61 0 0 chr5 7407794 7407843 -192222307 + AT_rich Low_complexity Low_complexity 1 49 0 325 306 59 41 chr5 7409108 7409278 -192220872 - MIR SINE MIR -83 179 7 244 241 19 0 chr5 7409472 7409526 -192220624 + L2 LINE L2 3257 3311 -2 395 287 47 16 chr5 7409608 7409737 -192220413 - MLT1J2 LTR MaLR -305 145 13 538 362 33 9 chr5 7409835 7410172 -192219978 - L2 LINE L2 -944 2370 2026 21 57 0 0 chr5 7410904 7410939 -192219211 + AT_rich Low_complexity Low_complexity 1 35 0 384 209 41 12 chr5 7411202 7411355 -192218795 + L1MA9 LINE L1 6021 6290 -7 1671 158 34 4 chr5 7411778 7412093 -192218057 - AluSx SINE Alu 0 333 11 189 244 22 0 chr5 7412635 7412680 -192217470 - L2 LINE L2 -10 3303 3258 673 254 0 0 chr5 7412814 7412940 -192217210 + FLAM_A SINE Alu 5 130 -3 299 245 19 19 chr5 7412957 7413063 -192217087 + (TA)n Simple_repeat Simple_repeat 2 107 0 300 53 0 0 chr5 7413572 7413610 -192216540 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 1057 228 58 67 chr5 7413630 7414150 -192216000 - MLT2D LTR ERVL 0 520 1 2464 166 74 21 chr5 7414499 7414933 -192215217 - MSTB2 LTR MaLR 0 457 1 2131 108 3 7 chr5 7415026 7415321 -192214829 - AluSg1 SINE Alu -15 294 1 462 49 0 0 chr5 7415340 7415401 -192214749 + (CA)n Simple_repeat Simple_repeat 2 62 0 237 314 19 38 chr5 7415416 7415521 -192214629 - MIR3 SINE MIR -94 114 12 3061 169 60 3 chr5 7415864 7416431 -192213719 - MER6A DNA MER2_type -6 599 1 1899 147 0 33 chr5 7416877 7417176 -192212974 - AluSx SINE Alu -23 289 1 1499 224 153 20 chr5 7418187 7418488 -192211662 + MLT1D LTR MaLR 1 381 -124 186 71 0 0 chr5 7418488 7418516 -192211634 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1499 224 153 20 chr5 7418516 7418660 -192211490 + MLT1D LTR MaLR 381 505 0 15221 222 19 25 chr5 7418859 7424428 -192205722 - L1PA15 LINE L1 -1 6815 1262 774 290 81 39 chr5 7424461 7424795 -192205355 - L1PA15 LINE L1 -6032 755 408 709 276 91 53 chr5 7425029 7425479 -192204671 - MLT1C LTR MaLR 0 467 1 191 186 34 34 chr5 7425778 7425837 -192204313 - MIR SINE MIR -63 145 87 400 302 118 12 chr5 7426123 7426292 -192203858 - MIR SINE MIR -48 214 28 22 0 0 0 chr5 7426476 7426498 -192203652 + AT_rich Low_complexity Low_complexity 1 22 0 216 67 0 0 chr5 7427615 7427645 -192202505 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 309 322 113 0 chr5 7428196 7428311 -192201839 + L2 LINE L2 3145 3272 0 285 296 170 18 chr5 7428510 7428733 -192201417 + MIR SINE MIR 4 260 -2 2102 111 0 27 chr5 7429363 7429660 -192200490 - AluSg SINE Alu -21 289 1 189 299 37 65 chr5 7429868 7429975 -192200175 + L2 LINE L2 3154 3257 -15 882 256 106 41 chr5 7430400 7430889 -192199261 + LTR33 LTR ERVL 1 521 0 524 222 120 24 chr5 7431036 7431203 -192198947 - MLT1J2 LTR MaLR -267 183 1 496 269 86 0 chr5 7431899 7432085 -192198065 + LTR16C LTR ERVL 286 487 -4 308 24 24 0 chr5 7432492 7432533 -192197617 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1558 164 4 14 chr5 7432841 7433116 -192197034 + AluJo SINE Alu 19 290 -22 1346 31 9 0 chr5 7433776 7433998 -192196152 + (TGAG)n Simple_repeat Simple_repeat 1 224 0 199 0 0 61 chr5 7435509 7435542 -192194608 + (TG)n Simple_repeat Simple_repeat 2 32 0 318 269 175 18 chr5 7436118 7436289 -192193861 + L2 LINE L2 2147 2344 -970 417 271 46 30 chr5 7436392 7436626 -192193524 + L1MC4 LINE L1 7823 7995 0 2099 95 6 63 chr5 7436641 7436956 -192193194 + AluSq SINE Alu 5 301 -12 391 377 54 14 chr5 7437344 7437694 -192192456 + L1MEd LINE L1 284 647 -5472 816 113 8 6 chr5 7437814 7437929 -192192221 + MSTB LTR MaLR 3 116 -312 2128 132 21 66 chr5 7437929 7438309 -192191841 - THE1B LTR MaLR 0 364 2 12771 85 6 2 chr5 7438310 7439884 -192190266 - THE1B-int LTR MaLR 0 1580 1 283 86 0 0 chr5 7439884 7439919 -192190231 - THE1B LTR MaLR 0 355 321 303 246 49 55 chr5 7440327 7440416 -192189734 + L1MEd LINE L1 2192 2280 -3849 1096 224 121 44 chr5 7440416 7440755 -192189395 - MLT1A1 LTR MaLR 0 365 1 303 246 49 55 chr5 7440755 7440848 -192189302 + L1MEd LINE L1 2280 2373 -3756 35 83 0 0 chr5 7440883 7440967 -192189183 + AT_rich Low_complexity Low_complexity 1 84 0 945 311 136 60 chr5 7440974 7441183 -192188967 + L1MEd LINE L1 2425 2617 -3512 2297 104 0 7 chr5 7441183 7441480 -192188670 - AluSg SINE Alu -15 295 1 945 311 136 60 chr5 7441480 7441940 -192188210 + L1MEd LINE L1 2617 3041 -3088 1789 174 7 3 chr5 7441940 7442239 -192187911 - AluJb SINE Alu -12 300 1 945 311 136 60 chr5 7442239 7443173 -192186977 + L1MEd LINE L1 3041 4150 -1979 264 331 61 13 chr5 7443188 7443358 -192186792 + L1MEd LINE L1 4194 4354 -1775 2188 111 0 7 chr5 7443358 7443665 -192186485 + AluSg SINE Alu 1 305 -5 264 331 61 13 chr5 7443665 7443805 -192186345 + L1MEd LINE L1 4354 4519 -1610 300 300 36 70 chr5 7444046 7444376 -192185774 + L1MEc LINE L1 498 816 -5580 2630 208 65 50 chr5 7444498 7445095 -192185055 - MER82 DNA MER2_type -46 607 2 320 356 95 11 chr5 7445403 7445667 -192184483 + L1ME LINE L1 259 544 -5526 300 156 31 0 chr5 7445980 7446044 -192184106 + L1MA7 LINE L1 6226 6291 0 301 228 65 22 chr5 7447859 7447951 -192182199 - MIR SINE MIR -48 214 119 1197 286 130 12 chr5 7448277 7448784 -192181366 - MLT1F1 LTR MaLR 0 567 1 1436 316 36 30 chr5 7449004 7449128 -192181022 + MLT1G1 LTR MaLR 1 123 -472 2136 191 14 3 chr5 7449128 7449485 -192180665 - MLT1A1 LTR MaLR -4 361 1 1436 316 36 30 chr5 7449485 7449886 -192180264 + MLT1G1 LTR MaLR 123 529 -66 985 257 168 32 chr5 7449887 7450362 -192179788 + L1ME2 LINE L1 5623 6162 -2 277 313 75 0 chr5 7451426 7451560 -192178590 + Charlie7 DNA MER1_type 261 404 -2208 1743 293 26 26 chr5 7451676 7452297 -192177853 + L1MEc LINE L1 35 658 -5738 1883 81 102 42 chr5 7452297 7452580 -192177570 - AluY SINE Alu -11 300 1 1743 293 26 26 chr5 7452580 7452674 -192177476 + L1MEc LINE L1 657 750 -5646 302 229 19 57 chr5 7452674 7452779 -192177371 + Charlie7 DNA MER1_type 424 524 -2088 375 311 40 13 chr5 7452792 7452943 -192177207 + L2 LINE L2 2935 3089 -224 231 380 0 0 chr5 7452993 7453064 -192177086 - L2 LINE L2 -59 3213 3143 391 231 22 52 chr5 7453122 7453256 -192176894 + Charlie7 DNA MER1_type 556 685 -1927 232 125 0 42 chr5 7454100 7454148 -192176002 - LTR66 LTR ERVL -171 439 394 1794 150 0 24 chr5 7455065 7455359 -192174791 + AluSx SINE Alu 11 297 -15 278 355 142 18 chr5 7456501 7456783 -192173367 - L3 LINE CR1 -3 1574 1258 600 279 83 10 chr5 7456812 7457127 -192173023 + L1ME3 LINE L1 5815 6158 -12 2529 142 61 0 chr5 7457866 7458261 -192171889 + MSTA LTR MaLR 1 419 -9 302 344 103 43 chr5 7458426 7459059 -192171091 - L2 LINE L2 -556 2758 2088 3785 200 46 12 chr5 7459194 7459948 -192170202 - MLT-int LTR MaLR -955 780 1 307 259 82 0 chr5 7459978 7460063 -192170087 - MLT2B1 LTR ERVL -59 461 370 3840 128 37 37 chr5 7460074 7460716 -192169434 + MER4D LTR ERV1 141 782 -90 699 125 8 25 chr5 7460709 7460829 -192169321 - MER4D LTR ERV1 -785 118 1 * 273 128 0 0 chr5 7463159 7463206 -192166944 + (TG)n Simple_repeat Simple_repeat 2 48 0 2283 73 20 3 chr5 7463672 7463851 -192166299 - AluY SINE Alu -6 305 118 495 33 0 0 chr5 7463851 7463912 -192166238 + (TG)n Simple_repeat Simple_repeat 2 62 0 2283 73 20 3 chr5 7463912 7464032 -192166118 - AluY SINE Alu -193 118 1 205 305 102 0 chr5 7464619 7464737 -192165413 - MIR SINE MIR -74 188 59 * 250 311 56 28 chr5 7464669 7464849 -192165301 - L2 LINE L2 -355 2959 2775 396 0 0 0 chr5 7465256 7465300 -192164850 + (TG)n Simple_repeat Simple_repeat 2 45 0 744 182 8 8 chr5 7465749 7465881 -192164269 - FRAM SINE Alu -11 165 34 227 311 8 25 chr5 7466297 7466419 -192163731 - L1MEd LINE L1 -5947 172 53 234 0 0 0 chr5 7466429 7466455 -192163695 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 636 311 34 0 chr5 7466463 7466672 -192163478 + MIR SINE MIR 2 217 -45 594 54 14 0 chr5 7468565 7468639 -192161511 + MER4B LTR ERV1 528 602 -8 1351 226 43 48 chr5 7471438 7471810 -192158340 + MLT1A2 LTR MaLR 4 373 -1 235 217 17 17 chr5 7472046 7472106 -192158044 - MIR SINE MIR -117 145 86 256 278 120 0 chr5 7474029 7474137 -192156013 - L1ME4a LINE L1 -2 6119 5999 465 293 6 13 chr5 7475911 7476068 -192154082 - L1ME1 LINE L1 -5 6161 6006 * 2404 263 92 4 chr5 7476063 7476886 -192153264 + L1M4 LINE L1 3909 4804 -1342 1877 272 72 47 chr5 7476883 7479121 -192151029 - L1ME LINE L1 -3387 2693 390 * 258 262 24 0 chr5 7479522 7479606 -192150544 - L1ME LINE L1 -5933 137 52 268 242 67 67 chr5 7479806 7479926 -192150224 - MIR SINE MIR 0 262 143 1302 177 262 12 chr5 7479926 7480095 -192150055 - MSTA LTR MaLR 0 428 302 189 0 0 0 chr5 7480095 7480116 -192150034 + (GA)n Simple_repeat Simple_repeat 1 21 0 1302 177 262 12 chr5 7480116 7480274 -192149876 - MSTA LTR MaLR -125 303 19 638 148 289 0 chr5 7480285 7480420 -192149730 + MSTA LTR MaLR 3 176 -252 2044 102 26 22 chr5 7480420 7480733 -192149417 + MSTA-int LTR MaLR 1267 1580 0 647 160 0 25 chr5 7480733 7480852 -192149298 + MSTA LTR MaLR 1 116 -312 419 143 0 0 chr5 7480839 7480902 -192149248 + MSTA LTR MaLR 366 428 0 * 283 354 77 0 chr5 7480902 7481032 -192149118 - MIR SINE MIR -115 147 8 364 297 71 23 chr5 7482059 7482325 -192147825 - L1M4 LINE L1 -3171 2975 2697 23 33 0 0 chr5 7482904 7482934 -192147216 + AT_rich Low_complexity Low_complexity 1 30 0 2197 259 28 44 chr5 7483056 7483123 -192147027 + L1MC4 LINE L1 7213 7280 -762 2623 125 8 3 chr5 7483123 7483484 -192146666 + THE1B LTR MaLR 1 363 -1 2197 259 28 44 chr5 7483484 7483974 -192146176 + L1MC4 LINE L1 7280 7738 -304 2171 113 0 0 chr5 7483974 7484257 -192145893 + AluSq SINE Alu 5 287 -26 2197 259 28 44 chr5 7484257 7484551 -192145599 + L1MC4 LINE L1 7738 8035 -7 210 118 0 0 chr5 7487673 7487707 -192142443 + (TC)n Simple_repeat Simple_repeat 1 34 0 2313 136 33 25 chr5 7489444 7489805 -192140345 + THE1B LTR MaLR 1 364 0 6313 211 27 37 chr5 7490179 7492852 -192137298 + L1MC1 LINE L1 3376 6019 -314 6904 137 8 64 chr5 7493979 7495072 -192135078 + HSMAR2 DNA Mariner 2 1018 -284 2111 128 0 7 chr5 7495072 7495368 -192134782 - AluSx SINE Alu -18 294 1 6904 137 8 64 chr5 7495368 7495527 -192134623 + HSMAR2 DNA Mariner 1018 1184 -118 308 358 42 0 chr5 7495847 7495967 -192134183 - MER5B DNA MER1_type -33 145 21 2548 158 58 16 chr5 7496068 7496516 -192133634 + MLT1C LTR MaLR 1 467 0 2125 122 0 3 chr5 7497975 7498269 -192131881 - AluSx SINE Alu -11 301 9 3665 74 4 13 chr5 7499162 7499636 -192130514 - L1PA7 LINE L1 0 6154 5685 1932 48 9 0 chr5 7499636 7499865 -192130285 + L1PA7 LINE L1 5449 5679 -475 1533 239 12 6 chr5 7499865 7500196 -192129954 - MER58B DNA MER1_type -8 333 1 551 191 48 34 chr5 7500482 7500629 -192129521 - MER103 DNA DNA -16 150 2 3858 139 7 2 chr5 7501261 7501815 -192128335 - MER41D LTR ERV1 0 557 1 318 240 50 0 chr5 7502516 7502616 -192127534 + CT-rich Low_complexity Low_complexity 1 105 0 417 290 111 12 chr5 7502863 7503025 -192127125 - L3b LINE CR1 -63 1520 1343 220 261 0 31 chr5 7503910 7503975 -192126175 - MER5A DNA MER1_type -119 70 8 385 260 10 102 chr5 7504171 7504367 -192125783 + MER5B DNA MER1_type 1 178 0 26 30 0 0 chr5 7504609 7504642 -192125508 + AT_rich Low_complexity Low_complexity 1 33 0 419 177 104 0 chr5 7505012 7505108 -192125042 + L1MB5 LINE L1 5620 5725 -449 5315 145 34 14 chr5 7505122 7506004 -192124146 + MER49 LTR ERV1 24 923 0 1976 197 28 30 chr5 7506004 7506113 -192124037 + L1MB5 LINE L1 5722 5830 -344 2114 125 0 3 chr5 7506113 7506416 -192123734 + AluSx SINE Alu 1 302 -10 1976 197 28 30 chr5 7506416 7506743 -192123407 + L1MB5 LINE L1 5830 6157 -17 631 256 45 5 chr5 7506765 7506964 -192123186 - L2 LINE L2 -157 3156 2950 388 296 0 0 chr5 7507515 7507630 -192122520 + MIR SINE MIR 20 134 -128 423 262 0 0 chr5 7507653 7507798 -192122352 + (CA)n Simple_repeat Simple_repeat 2 146 0 480 256 0 0 chr5 7507820 7507976 -192122174 + (CA)n Simple_repeat Simple_repeat 1 156 0 2788 108 11 0 chr5 7508782 7509153 -192120997 + THE1C LTR MaLR 1 375 0 211 263 90 15 chr5 7510316 7510449 -192119701 + L2 LINE L2 2750 2892 -422 342 188 52 52 chr5 7510751 7510847 -192119303 + L2 LINE L2 3169 3264 -49 222 220 0 0 chr5 7510872 7510931 -192119219 + GA-rich Low_complexity Low_complexity 4 62 0 2010 131 84 73 chr5 7512341 7512641 -192117509 + LTR34 LTR ERV1 1 309 -390 1686 141 80 29 chr5 7512641 7512917 -192117233 - AluSg SINE Alu -20 290 1 2010 131 84 73 chr5 7512917 7513082 -192117068 + LTR34 LTR ERV1 309 471 -228 1435 75 27 0 chr5 7513087 7513273 -192116877 + MER30 DNA MER1_type 6 196 -34 878 188 81 22 chr5 7513289 7513512 -192116638 + LTR34 LTR ERV1 464 699 0 1503 199 192 12 chr5 7515039 7515446 -192114704 + MLT2B1 LTR ERVL 1 480 -40 2234 102 30 25 chr5 7515449 7515992 -192114158 + MER51A LTR ERV1 1 634 0 294 295 11 0 chr5 7517991 7518086 -192112064 + MIR SINE MIR 77 172 -90 345 315 47 7 chr5 7518092 7518241 -192111909 + MIR SINE MIR 108 262 0 469 233 23 39 chr5 7518637 7518766 -192111384 + MER5A DNA MER1_type 63 189 0 753 268 13 31 chr5 7518771 7518937 -192111213 + MER58A DNA MER1_type 1 163 -2257 2255 147 50 21 chr5 7518937 7519374 -192110776 - LTR7 LTR ERV1 0 450 1 753 268 13 31 chr5 7519374 7519435 -192110715 + MER58A DNA MER1_type 163 224 0 265 304 193 12 chr5 7520560 7520721 -192109429 + MLT1H1 LTR MaLR 76 265 -290 4440 98 21 2 chr5 7520844 7521458 -192108692 + MER41B LTR ERV1 1 626 -9 292 202 185 53 chr5 7521482 7521655 -192108495 + MLT1H1 LTR MaLR 354 554 -1 1750 20 0 0 chr5 7521967 7522165 -192107985 - L1PA4 LINE L1 -2 6153 5956 1489 6 0 0 chr5 7522165 7522328 -192107822 + L1PA4 LINE L1 5781 5943 -212 1284 19 0 37 chr5 7523446 7523608 -192106542 + L1PA4 LINE L1 6000 6155 0 2015 255 48 14 chr5 7523675 7524484 -192105666 + L1ME1 LINE L1 4285 5121 -1025 1416 207 155 17 chr5 7524528 7524575 -192105575 - MSTD LTR MaLR 0 396 357 2740 126 34 0 chr5 7524575 7524989 -192105161 + MSTA LTR MaLR 1 428 0 1416 207 155 17 chr5 7524989 7525289 -192104861 - MSTD LTR MaLR -39 357 1 3364 235 40 23 chr5 7525289 7525441 -192104709 + L1ME1 LINE L1 5179 5327 -839 2135 140 0 3 chr5 7525441 7525748 -192104402 - AluSg SINE Alu -4 306 1 3364 235 40 23 chr5 7525748 7526531 -192103619 + L1ME1 LINE L1 5327 6117 -49 28 29 0 0 chr5 7526749 7526784 -192103366 + AT_rich Low_complexity Low_complexity 1 35 0 558 299 7 0 chr5 7528599 7528743 -192101407 + MIR SINE MIR 13 157 -105 434 183 17 126 chr5 7529629 7529729 -192100421 + MLT1D LTR MaLR 1 76 -429 1999 194 3 6 chr5 7529729 7530095 -192100055 - MLT1A1 LTR MaLR 0 365 1 434 183 17 126 chr5 7530095 7530169 -192099981 + MLT1D LTR MaLR 76 156 -349 261 0 0 0 chr5 7530186 7530215 -192099935 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1004 138 0 0 chr5 7530216 7530361 -192099789 - AluSg/x SINE Alu -33 279 135 817 229 124 1 chr5 7530395 7530620 -192099530 + MLT1D LTR MaLR 226 505 0 608 262 29 14 chr5 7532085 7532295 -192097855 + MER20 DNA MER1_type 4 216 -3 2284 107 0 0 chr5 7533261 7533571 -192096579 + AluSx SINE Alu 1 310 -2 190 308 33 0 chr5 7535217 7535308 -192094842 + MIR SINE MIR 49 142 -120 214 306 74 8 chr5 7536199 7536320 -192093830 + L2 LINE L2 3184 3312 -1 205 229 0 49 chr5 7536672 7536733 -192093417 + GA-rich Low_complexity Low_complexity 1 58 0 935 214 45 67 chr5 7537361 7537674 -192092476 - MLT1B LTR MaLR 0 390 85 180 295 16 0 chr5 7537730 7537791 -192092359 - L2 LINE L2 -562 2752 2691 547 125 0 0 chr5 7537914 7537994 -192092156 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr5 7538472 7538493 -192091657 + AT_rich Low_complexity Low_complexity 1 21 0 781 239 91 0 chr5 7539462 7539692 -192090458 + MIR SINE MIR 12 262 0 21 36 0 0 chr5 7539819 7539847 -192090303 + AT_rich Low_complexity Low_complexity 1 28 0 2253 108 0 0 chr5 7539977 7540264 -192089886 + AluSx SINE Alu 1 287 -25 217 302 54 39 chr5 7540652 7540781 -192089369 + L2 LINE L2 2927 3057 -256 2087 244 30 38 chr5 7540950 7540988 -192089162 - MER90 LTR ERV1 -4 610 573 1847 207 11 3 chr5 7540988 7541350 -192088800 + MLT1A1 LTR MaLR 1 365 0 2087 244 30 38 chr5 7541350 7541922 -192088228 - MER90 LTR ERV1 -41 573 5 186 43 0 0 chr5 7541967 7541990 -192088160 + (T)n Simple_repeat Simple_repeat 1 23 0 324 0 0 0 chr5 7542077 7542113 -192088037 + (TG)n Simple_repeat Simple_repeat 2 37 0 970 243 58 29 chr5 7542127 7542440 -192087710 - MER2 DNA MER2_type -20 325 4 284 164 0 82 chr5 7542454 7542527 -192087623 + MLT2B1 LTR ERVL 454 520 0 498 104 14 49 chr5 7543452 7543596 -192086554 + (TA)n Simple_repeat Simple_repeat 2 140 0 214 167 46 56 chr5 7543600 7543708 -192086442 + (TTATA)n Simple_repeat Simple_repeat 2 108 0 325 281 0 15 chr5 7545338 7545473 -192084677 + (CA)n Simple_repeat Simple_repeat 2 134 0 184 254 9 9 chr5 7545485 7545599 -192084551 + (CA)n Simple_repeat Simple_repeat 1 114 0 1763 214 63 0 chr5 7546011 7546389 -192083761 + MER57A LTR ERV1 1 402 -1 285 291 3 11 chr5 7547265 7547366 -192082784 - MIR SINE MIR -87 121 20 182 313 15 0 chr5 7548452 7548519 -192081631 - MIR3 SINE MIR -30 178 111 2195 108 60 28 chr5 7548663 7549016 -192081134 - THE1B LTR MaLR 0 364 1 11455 103 10 1 chr5 7549016 7550582 -192079568 - THE1B-int LTR MaLR 0 1580 1 2274 102 54 23 chr5 7550582 7550935 -192079215 - THE1B LTR MaLR 0 364 1 1777 148 14 11 chr5 7551265 7551543 -192078607 + AluSg SINE Alu 14 292 -18 1098 182 5 0 chr5 7551570 7551762 -192078388 + L1PB1 LINE L1 3 195 -6668 14486 154 49 12 chr5 7551765 7557765 -192072385 + L1PB1 LINE L1 634 6866 -1 2680 136 2 5 chr5 7558176 7558581 -192071569 + MSTA-int LTR MaLR 1248 1651 0 2364 119 107 20 chr5 7558581 7558975 -192071175 + MSTA LTR MaLR 1 428 0 224 261 15 15 chr5 7559060 7559125 -192071025 + L2 LINE L2 3203 3267 -5 1082 235 90 36 chr5 7560440 7561049 -192069101 - MER76 LTR ERV -6 682 3 372 170 51 20 chr5 7561183 7561450 -192068700 + (TA)n Simple_repeat Simple_repeat 1 275 0 217 311 54 0 chr5 7562130 7562204 -192067946 - L2 LINE L2 -229 3043 2966 1620 229 103 63 chr5 7562267 7563017 -192067133 - L1ME3 LINE L1 -85 6077 5298 5502 150 45 15 chr5 7563081 7563983 -192066167 - L1PB1 LINE L1 -1 6150 5136 2198 107 0 41 chr5 7563983 7564301 -192065849 + AluSg SINE Alu 1 305 -5 5502 150 45 15 chr5 7564301 7564563 -192065587 - L1PB1 LINE L1 -1015 5136 4883 442 245 161 10 chr5 7564572 7564764 -192065386 + L1M4 LINE L1 3080 3300 -2846 307 233 207 9 chr5 7564916 7565032 -192065118 + L1M4 LINE L1 4484 4622 -1524 670 211 28 22 chr5 7565052 7565232 -192064918 - L1ME3 LINE L1 -1542 4604 4424 22 35 0 0 chr5 7565683 7565712 -192064438 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr5 7566686 7566718 -192063432 + AT_rich Low_complexity Low_complexity 1 32 0 2188 97 3 7 chr5 7566894 7567182 -192062968 + AluSq SINE Alu 14 300 -13 348 252 53 30 chr5 7568192 7568323 -192061827 - LTR16A LTR ERVL -84 366 233 2010 233 45 11 chr5 7568548 7568991 -192061159 - MLT1C LTR MaLR -9 458 1 648 218 292 9 chr5 7569033 7569628 -192060522 - LTR50 LTR ERVL -1 794 9 1385 176 77 35 chr5 7570660 7570972 -192059178 - MLT1A1 LTR MaLR -2 363 39 249 83 0 0 chr5 7571167 7571203 -192058947 + (TTG)n Simple_repeat Simple_repeat 1 36 0 863 169 0 26 chr5 7571203 7571332 -192058818 - AluJo SINE Alu -49 263 135 2071 118 35 3 chr5 7571332 7571620 -192058530 - AluSx SINE Alu -15 297 1 863 169 0 26 chr5 7571620 7571633 -192058517 - AluJo SINE Alu -177 135 123 204 67 0 0 chr5 7571638 7571668 -192058482 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 36 0 0 0 chr5 7571668 7571704 -192058446 + AT_rich Low_complexity Low_complexity 1 36 0 345 194 0 0 chr5 7571704 7571766 -192058384 - AluJo SINE Alu -169 133 72 208 356 0 14 chr5 7571954 7572027 -192058123 + MIR SINE MIR 22 93 -169 329 271 232 13 chr5 7572415 7572570 -192057580 - MIR SINE MIR -17 245 57 1177 227 139 17 chr5 7573297 7573505 -192056645 - MSTD LTR MaLR 0 396 215 2231 120 3 0 chr5 7573505 7573806 -192056344 - AluSx SINE Alu -10 302 1 1177 227 139 17 chr5 7573806 7573949 -192056201 - MSTD LTR MaLR -181 215 2 236 330 18 0 chr5 7574799 7574911 -192055239 + L1MB7 LINE L1 1372 1485 -4899 214 125 42 0 chr5 7574911 7574959 -192055191 + (TA)n Simple_repeat Simple_repeat 1 50 0 221 29 0 57 chr5 7574991 7575026 -192055124 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 538 333 143 28 chr5 7575038 7575725 -192054425 + L1MB7 LINE L1 1667 2432 -4131 875 282 109 30 chr5 7575796 7576339 -192053811 + L1MB7 LINE L1 4056 4641 -1741 14144 72 6 17 chr5 7576371 7578193 -192051957 - HERVL LTR ERVL -350 5304 3503 9116 76 26 1 chr5 7578198 7579353 -192050797 - HERVL LTR ERVL -2424 3230 2047 630 78 0 0 chr5 7580234 7580311 -192049839 - MADE1 DNA Mariner 0 80 4 2099 152 0 0 chr5 7580619 7580922 -192049228 + AluSx SINE Alu 1 303 -9 215 170 43 0 chr5 7581824 7581871 -192048279 + GA-rich Low_complexity Low_complexity 1 49 0 581 215 90 42 chr5 7583340 7583484 -192046666 + MER106B DNA MER1_type 1 151 -908 238 214 0 0 chr5 7583505 7583547 -192046603 + MER106B DNA MER1_type 1018 1059 0 3622 201 47 17 chr5 7583581 7584233 -192045917 + L1MB7 LINE L1 5383 6083 -337 1207 144 55 15 chr5 7584233 7584435 -192045715 + MER6B DNA MER2_type 1 210 0 3622 201 47 17 chr5 7584435 7584753 -192045397 + L1MB7 LINE L1 6083 6390 -30 297 355 0 0 chr5 7586026 7586133 -192044017 - L3b LINE CR1 -228 1355 1249 232 308 0 0 chr5 7589553 7589618 -192040532 + T-rich Low_complexity Low_complexity 1 65 0 379 287 63 40 chr5 7589781 7590348 -192039802 - L1ME LINE L1 -265 5856 5257 2183 178 11 13 chr5 7591051 7591427 -192038723 + THE1C LTR MaLR 1 375 0 886 303 27 30 chr5 7593019 7593349 -192036801 + LTR16A LTR ERVL 122 450 0 2017 158 0 0 chr5 7593859 7594163 -192035987 + AluSx SINE Alu 1 304 -8 517 111 0 0 chr5 7594206 7594278 -192035872 + AluS SINE Alu 232 303 -8 2291 48 4 0 chr5 7594383 7594651 -192035499 + L1PA5 LINE L1 5886 6154 0 439 147 8 9 chr5 7594651 7594760 -192035390 + L1M2 LINE L1 5597 5778 -513 41 0 0 0 chr5 7594766 7594807 -192035343 + AT_rich Low_complexity Low_complexity 1 41 0 8779 216 53 13 chr5 7594831 7597283 -192032867 + L1MA7 LINE L1 3084 5647 -1918 325 149 89 18 chr5 7597412 7597580 -192032570 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 377 178 46 36 chr5 7597475 7597803 -192032347 + (TTATA)n Simple_repeat Simple_repeat 1 331 0 6175 147 28 27 chr5 7597823 7599523 -192030627 + L1MA7 LINE L1 5644 7337 -373 3367 33 5 18 chr5 7599526 7599923 -192030227 - L1PA4 LINE L1 0 6155 5764 2084 174 16 8 chr5 7599925 7600311 -192029839 + L1MA7 LINE L1 7321 7709 -1 549 288 47 56 chr5 7600857 7601111 -192029039 - MIR SINE MIR -16 246 3 596 186 18 0 chr5 7602492 7602605 -192027545 - L1P4 LINE L1 -549 5619 5505 465 240 0 56 chr5 7602606 7602731 -192027419 + MLT1A1 LTR MaLR 246 363 -2 379 269 0 21 chr5 7602733 7602826 -192027324 - MLT1A1 LTR MaLR -272 93 3 22 0 0 0 chr5 7604383 7604405 -192025745 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 7604470 7604497 -192025653 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1005 93 29 88 chr5 7604497 7604702 -192025448 - L1PA10 LINE L1 -13 6155 5963 1616 127 14 113 chr5 7604817 7605163 -192024987 - LTR9 LTR ERV1 -300 312 1 236 293 0 13 chr5 7605186 7605261 -192024889 + MLT-int LTR MaLR 935 1008 -727 2037 194 48 68 chr5 7605291 7605775 -192024375 + MLT1A1-int LTR MaLR 1254 1727 -8 2038 159 21 40 chr5 7605782 7606154 -192023996 + MLT1A1 LTR MaLR 1 365 0 279 271 51 25 chr5 7607887 7608005 -192022145 - MIR SINE MIR -72 136 16 1014 179 72 9 chr5 7608409 7608632 -192021518 + L1MC2 LINE L1 6099 6335 -9 2072 137 7 0 chr5 7609827 7610133 -192020017 - AluSx SINE Alu -4 308 1 2349 181 34 79 chr5 7610706 7610963 -192019187 - MER41C LTR ERV1 -1 634 367 2260 142 129 5 chr5 7610963 7611344 -192018806 + MSTA LTR MaLR 1 428 0 2349 181 34 79 chr5 7611344 7611702 -192018448 - MER41C LTR ERV1 -268 367 1 1276 196 86 65 chr5 7612219 7612601 -192017549 + MLT1B LTR MaLR 1 390 0 22 35 0 0 chr5 7614445 7614474 -192015676 + AT_rich Low_complexity Low_complexity 1 29 0 2575 108 5 24 chr5 7616241 7616612 -192013538 + THE1B LTR MaLR 1 364 0 351 0 0 0 chr5 7617172 7617211 -192012939 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 954 255 180 19 chr5 7620530 7620902 -192009248 + MLT1H LTR MaLR 1 432 -117 214 293 19 24 chr5 7620904 7621013 -192009137 - MIR SINE MIR -94 114 4 264 77 0 0 chr5 7621174 7621213 -192008937 + (TC)n Simple_repeat Simple_repeat 1 39 0 1655 172 14 24 chr5 7621878 7622175 -192007975 + AluJb SINE Alu 5 298 -14 220 325 73 24 chr5 7622181 7622304 -192007846 - MIR SINE MIR -74 188 60 2088 63 35 3 chr5 7622771 7623056 -192007094 + L1PA10 LINE L1 5731 6024 -144 1742 122 0 0 chr5 7623162 7623417 -192006733 + L1PA13 LINE L1 5907 6161 -2 471 236 0 0 chr5 7623690 7623779 -192006371 + MER58A DNA MER1_type 1 89 -18 2165 134 7 0 chr5 7624230 7624537 -192005613 + AluSx SINE Alu 1 309 -3 628 270 23 0 chr5 7625529 7625703 -192004447 - MER5B DNA MER1_type 0 178 1 267 263 18 35 chr5 7625905 7626019 -192004131 - MIR SINE MIR -100 162 51 2286 110 3 0 chr5 7628640 7628950 -192001200 + AluSx SINE Alu 1 311 -1 1929 142 33 0 chr5 7630684 7630986 -191999164 - AluJo SINE Alu 0 312 1 702 252 121 114 chr5 7631620 7632211 -191997939 + MLT1F1 LTR MaLR 1 567 0 21 0 0 0 chr5 7632268 7632289 -191997861 + AT_rich Low_complexity Low_complexity 1 21 0 337 247 41 14 chr5 7632290 7632363 -191997787 + MER21B LTR ERV1 15 89 -774 2895 243 110 8 chr5 7632385 7633151 -191996999 + MER21B LTR ERV1 19 862 -1 425 222 23 123 chr5 7634788 7634959 -191995191 - MIR SINE MIR -81 181 28 237 163 0 0 chr5 7635194 7635237 -191994913 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 573 257 44 79 chr5 7635686 7636001 -191994149 + L2 LINE L2 2979 3282 -31 378 240 163 78 chr5 7636039 7636130 -191994020 + HAL1 LINE L1 1010 1092 -1415 2124 121 0 0 chr5 7636130 7636412 -191993738 + AluSx SINE Alu 1 282 -30 378 240 163 78 chr5 7636412 7636578 -191993572 + HAL1 LINE L1 1092 1289 -1218 617 249 92 18 chr5 7636619 7636848 -191993302 + LTR33 LTR ERVL 4 249 -272 243 219 16 31 chr5 7637209 7637273 -191992877 + LTR33 LTR ERVL 456 518 -3 365 273 74 34 chr5 7637285 7637461 -191992689 + HAL1 LINE L1 1336 1518 -989 379 223 96 0 chr5 7638413 7638507 -191991643 + MER58 DNA MER1_type 1 103 -112 838 292 81 26 chr5 7638642 7639063 -191991087 + MLT1J2 LTR MaLR 4 447 -3 1186 55 0 0 chr5 7639981 7640127 -191990023 - L1P LINE L1 -5999 147 2 225 0 0 0 chr5 7640752 7640777 -191989373 + (TG)n Simple_repeat Simple_repeat 2 26 0 1888 208 78 8 chr5 7641177 7641545 -191988605 + L1M4 LINE L1 4917 5346 -838 1915 61 15 8 chr5 7641545 7641806 -191988344 + L1PA13 LINE L1 5901 6163 0 1888 208 78 8 chr5 7641806 7642049 -191988101 + L1M4 LINE L1 5346 5570 -614 399 264 15 1 chr5 7642110 7642222 -191987928 + L1M4 LINE L1 5517 5626 -558 25 31 0 0 chr5 7642246 7642278 -191987872 + AT_rich Low_complexity Low_complexity 1 32 0 981 125 7 0 chr5 7642357 7642509 -191987641 + L1M4 LINE L1 5637 5789 -395 317 49 0 0 chr5 7642610 7642651 -191987499 + L1PA3 LINE L1 6112 6152 -3 2606 131 5 0 chr5 7643999 7644372 -191985778 + THE1C LTR MaLR 1 375 0 28 48 0 0 chr5 7645115 7645157 -191984993 + AT_rich Low_complexity Low_complexity 1 42 0 341 301 52 0 chr5 7646913 7647049 -191983101 + MIR SINE MIR 108 250 -12 10144 74 7 37 chr5 7648626 7650550 -191979600 - L1PA7 LINE L1 0 6154 4295 2320 104 0 0 chr5 7650550 7650847 -191979303 - AluSc SINE Alu -12 297 1 10144 74 7 37 chr5 7650847 7651197 -191978953 - L1PA7 LINE L1 -1859 4295 3936 234 352 122 13 chr5 7652461 7652691 -191977459 + L2 LINE L2 2812 3066 -206 630 95 0 78 chr5 7652947 7653082 -191977068 + AluY SINE Alu 197 311 0 198 143 0 0 chr5 7653229 7653264 -191976886 + (TCC)n Simple_repeat Simple_repeat 3 37 0 433 316 7 20 chr5 7653932 7654084 -191976066 + MIR SINE MIR 16 165 -97 527 203 0 0 chr5 7654382 7654515 -191975635 - MER96B DNA MER1_type? -241 176 44 308 211 39 19 chr5 7654539 7654643 -191975507 + MIR SINE MIR 155 260 -2 721 306 83 23 chr5 7656411 7656806 -191973344 + L2 LINE L2 2888 3306 -7 29 70 0 0 chr5 7657116 7657173 -191972977 + AT_rich Low_complexity Low_complexity 1 57 0 394 279 39 26 chr5 7658533 7658687 -191971463 + MIR SINE MIR 34 189 -73 31 58 0 0 chr5 7660897 7660949 -191969201 + AT_rich Low_complexity Low_complexity 1 52 0 225 260 58 29 chr5 7661180 7661284 -191968866 - L1MC/D LINE L1 -1940 5868 5762 1227 212 48 79 chr5 7661294 7661624 -191968526 - MLT1F LTR MaLR -20 522 203 986 194 55 27 chr5 7711639 7711968 -191918182 + L1MC2 LINE L1 4979 5316 -830 * 5083 166 19 22 chr5 7711963 7713154 -191916996 - L1PA16 LINE L1 -12 6154 4975 2839 201 24 39 chr5 7713156 7713826 -191916324 + L1MC2 LINE L1 5304 5963 -381 565 194 46 0 chr5 7714331 7714439 -191915711 + L1PA15 LINE L1 6051 6163 -2 1071 216 26 45 chr5 7714445 7714709 -191915441 - MLT1A1 LTR MaLR -106 259 1 2673 253 73 63 chr5 7714730 7715494 -191914656 + MLT-int LTR MaLR 171 948 -787 2727 175 26 72 chr5 7715494 7716135 -191914015 - LTR9 LTR ERV1 0 612 1 2673 253 73 63 chr5 7716135 7716295 -191913855 + MLT-int LTR MaLR 948 1105 -630 2070 195 48 66 chr5 7716262 7716745 -191913405 + MLT1A1-int LTR MaLR 1254 1727 -8 * 1918 159 21 40 chr5 7716752 7717124 -191913026 + MLT1A1 LTR MaLR 1 365 0 242 271 51 25 chr5 7718857 7718975 -191911175 - MIR SINE MIR -72 136 16 879 147 70 0 chr5 7719633 7719790 -191910360 + MLT1C LTR MaLR 1 168 -299 228 170 0 19 chr5 7719798 7719851 -191910299 + T-rich Low_complexity Low_complexity 5 56 0 2212 108 3 0 chr5 7719860 7720157 -191909993 - AluSx SINE Alu -10 302 5 912 214 146 11 chr5 7720163 7720438 -191909712 + MLT1C LTR MaLR 156 467 0 222 330 102 8 chr5 7724304 7724422 -191905728 - MIR SINE MIR -63 145 17 1452 224 43 19 chr5 7725062 7725478 -191904672 - MLT1C LTR MaLR -41 426 1 521 300 77 13 chr5 7726324 7726557 -191903593 + MIR SINE MIR 14 261 -1 1666 156 33 77 chr5 7726566 7726937 -191903213 + MER93b LTR ERV1 1 356 -17 1968 134 13 29 chr5 7726937 7727244 -191902906 - AluSx SINE Alu -10 302 1 1666 156 33 77 chr5 7727244 7727262 -191902888 + MER93b LTR ERV1 356 373 0 23 0 0 0 chr5 7728075 7728098 -191902052 + AT_rich Low_complexity Low_complexity 1 23 0 1054 231 43 61 chr5 7728318 7728694 -191901456 - MLT1A2 LTR MaLR -4 370 2 21 0 0 0 chr5 7728743 7728764 -191901386 + AT_rich Low_complexity Low_complexity 1 21 0 2141 126 0 0 chr5 7729195 7729488 -191900662 + AluSx SINE Alu 6 298 -14 324 179 45 0 chr5 7731251 7731318 -191898832 - MLT2D LTR ERVL 0 520 451 1787 196 32 27 chr5 7731390 7731762 -191898388 - MLT2D LTR ERVL -40 374 1 195 107 0 0 chr5 7734476 7734504 -191895646 + MIR SINE MIR 17 44 -218 * 317 153 56 14 chr5 7734502 7734574 -191895576 - MIR SINE MIR -90 172 98 1449 208 83 38 chr5 7734719 7735162 -191894988 - MLT1C LTR MaLR 0 467 5 392 118 15 0 chr5 7735545 7735613 -191894537 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 283 161 345 0 chr5 7735689 7735776 -191894374 + L2 LINE L2 3193 3309 -4 441 50 0 0 chr5 7735845 7735905 -191894245 + (CA)n Simple_repeat Simple_repeat 1 60 0 1422 186 54 11 chr5 7736429 7736708 -191893442 + MER2 DNA MER2_type 48 338 -7 334 271 36 7 chr5 7736746 7736886 -191893264 - L2 LINE L2 -805 2509 2366 530 279 123 6 chr5 7737210 7737526 -191892624 - L2 LINE L2 -889 2425 2073 231 313 106 28 chr5 7737571 7737642 -191892508 - L2 LINE L2 -1533 1781 1717 2200 115 0 16 chr5 7737642 7737956 -191892194 - AluSx SINE Alu -3 309 1 231 313 106 28 chr5 7737956 7738101 -191892049 - L2 LINE L2 -1597 1717 1548 240 290 20 60 chr5 7738738 7738838 -191891312 + MIR SINE MIR 40 135 -73 1509 93 29 0 chr5 7738881 7739086 -191891064 - AluSc SINE Alu -6 303 93 1830 157 10 3 chr5 7739835 7740140 -191890010 + AluSx SINE Alu 5 311 -1 430 265 54 20 chr5 7740162 7740309 -191889841 - LTR33 LTR ERVL -54 467 316 958 161 7 13 chr5 7741353 7741508 -191888642 - AluSq SINE Alu -159 154 1 2650 216 112 111 chr5 7741519 7741547 -191888603 - Zaphod DNA AcHobo -1692 2339 2313 1818 107 122 0 chr5 7741547 7741810 -191888340 - AluSq SINE Alu -18 295 1 2650 216 112 111 chr5 7741810 7743197 -191886953 - Zaphod DNA AcHobo -1718 2313 928 1716 122 122 0 chr5 7743197 7743459 -191886691 + AluSq SINE Alu 1 294 -19 2650 216 112 111 chr5 7743459 7743498 -191886652 - Zaphod DNA AcHobo -3103 928 891 2044 134 10 7 chr5 7743498 7743790 -191886360 + AluSq SINE Alu 1 293 -20 2650 216 112 111 chr5 7743790 7744035 -191886115 - Zaphod DNA AcHobo -3140 891 637 552 254 18 47 chr5 7744157 7744326 -191885824 - Zaphod DNA AcHobo -3795 236 73 268 325 41 6 chr5 7744482 7744651 -191885499 + L1ME3A LINE L1 5749 5923 -247 255 273 27 82 chr5 7744763 7744946 -191885204 + L1ME3A LINE L1 5989 6161 -9 2015 138 7 0 chr5 7745072 7745363 -191884787 + AluY SINE Alu 1 293 -18 2031 187 52 29 chr5 7745479 7745960 -191884190 - LTR22B LTR ERVK 0 492 1 197 275 7 22 chr5 7747828 7747897 -191882253 + GA-rich Low_complexity Low_complexity 1 69 -67 1694 193 19 43 chr5 7747897 7748271 -191881879 - MLT1A1 LTR MaLR 0 365 1 197 275 7 22 chr5 7748271 7748339 -191881811 + GA-rich Low_complexity Low_complexity 69 136 0 24 0 0 0 chr5 7748493 7748517 -191881633 + AT_rich Low_complexity Low_complexity 1 24 0 693 249 98 10 chr5 7748765 7749070 -191881080 - L1M4 LINE L1 -1484 4662 4331 284 161 148 37 chr5 7752403 7752484 -191877666 + MLT1C LTR MaLR 3 92 -375 1293 194 127 12 chr5 7752611 7752957 -191877193 + MLT1C LTR MaLR 82 467 0 414 0 0 0 chr5 7754609 7754655 -191875495 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 180 111 0 0 chr5 7754656 7754683 -191875467 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 539 41 27 0 chr5 7755383 7755456 -191874694 + (GAAAA)n Simple_repeat Simple_repeat 2 76 0 286 298 43 43 chr5 7755522 7755683 -191874467 + L3 LINE CR1 1293 1453 -124 472 154 82 27 chr5 7756215 7756325 -191873825 + MER95 LTR ERV 316 431 0 232 318 57 0 chr5 7756482 7756570 -191873580 + MIR SINE MIR 97 189 -73 180 0 0 0 chr5 7756855 7756875 -191873275 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 237 186 0 0 chr5 7756875 7756918 -191873232 + L1M4 LINE L1 5164 5206 -940 5495 175 31 32 chr5 7757255 7758206 -191871944 - L1MC1 LINE L1 0 6333 5379 2176 104 21 0 chr5 7758206 7758494 -191871656 - AluSx SINE Alu -18 294 1 5495 175 31 32 chr5 7758494 7758714 -191871436 - L1MC1 LINE L1 -954 5379 5160 1642 152 4 0 chr5 7760148 7760411 -191869739 - L1MA8 LINE L1 -392 5899 5636 836 166 31 6 chr5 7760410 7760573 -191869577 + L1MA6 LINE L1 5937 6103 -197 * 290 192 0 0 chr5 7760629 7760681 -191869469 + L1MA8 LINE L1 6217 6268 -23 535 299 99 5 chr5 7762081 7762292 -191867858 + MIR SINE MIR 25 255 -7 383 233 39 10 chr5 7762544 7762647 -191867503 - MLT1J LTR MaLR -303 208 103 272 200 12 0 chr5 7764644 7764724 -191865426 + GA-rich Low_complexity Low_complexity 3 83 0 2428 130 11 3 chr5 7766333 7766694 -191863456 + THE1B LTR MaLR 1 364 0 552 265 163 30 chr5 7766718 7767050 -191863100 + L2 LINE L2 2369 2744 -570 218 335 47 43 chr5 7767162 7767440 -191862710 + L2 LINE L2 2231 2509 -805 209 330 35 52 chr5 7767545 7767660 -191862490 + L2 LINE L2 3117 3229 -43 240 278 28 0 chr5 7768831 7768903 -191861247 + (CA)n Simple_repeat Simple_repeat 1 74 0 339 177 46 0 chr5 7768928 7769058 -191861092 + (CA)n Simple_repeat Simple_repeat 2 137 0 356 309 15 7 chr5 7769233 7769369 -191860781 - MER5A DNA MER1_type -3 186 50 423 56 42 0 chr5 7769852 7769923 -191860227 + (CACAA)n Simple_repeat Simple_repeat 1 74 0 2071 178 35 0 chr5 7770078 7770455 -191859695 - MLT1B LTR MaLR 0 390 1 207 0 0 0 chr5 7770838 7770861 -191859289 + (A)n Simple_repeat Simple_repeat 1 23 0 258 271 94 12 chr5 7771270 7771355 -191858795 + L1ME LINE L1 5482 5573 -548 2606 193 14 60 chr5 7771601 7772181 -191857969 + MER68 LTR ERV1 2 554 -8 2025 170 29 24 chr5 7772335 7772488 -191857662 + MSTA LTR MaLR 45 196 -232 2073 126 7 10 chr5 7772488 7772790 -191857360 + AluSx SINE Alu 1 301 -11 2025 170 29 24 chr5 7772790 7772921 -191857229 + MSTA LTR MaLR 196 334 -94 2696 108 11 0 chr5 7772921 7773292 -191856858 + THE1C LTR MaLR 1 375 0 2025 170 29 24 chr5 7773292 7773388 -191856762 + MSTA LTR MaLR 334 428 0 195 303 156 9 chr5 7774102 7774211 -191855939 - L2 LINE L2 -10 3303 3179 1429 279 33 4 chr5 7774572 7775023 -191855127 + LTR16B LTR ERVL 1 464 0 361 272 148 0 chr5 7775918 7776080 -191854070 - MIR SINE MIR -64 198 13 971 241 65 32 chr5 7777987 7778356 -191851794 + LTR37A LTR ERV1 39 419 -7 216 0 0 0 chr5 7778395 7778419 -191851731 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3548 139 55 3 chr5 7779860 7780428 -191849722 - MER50 LTR ERV1 -23 711 115 414 294 85 28 chr5 7780399 7780610 -191849540 - MER112 DNA MER1_type -21 239 17 * 878 269 137 28 chr5 7780732 7780842 -191849308 + LTR16A LTR ERVL 11 108 -342 2675 91 8 0 chr5 7780842 7781194 -191848956 + THE1A LTR MaLR 1 355 0 878 269 137 28 chr5 7781194 7781477 -191848673 + LTR16A LTR ERVL 108 447 -3 184 121 61 0 chr5 7782537 7782570 -191847580 - L3b LINE CR1 -113 1470 1436 1932 265 34 27 chr5 7784025 7784649 -191845501 + MLT1E3 LTR MaLR 5 620 -4 28 61 0 0 chr5 7784700 7784749 -191845401 + AT_rich Low_complexity Low_complexity 1 49 0 377 223 158 7 chr5 7784813 7784952 -191845198 - LTR33 LTR ERVL -69 452 293 1415 170 30 102 chr5 7786576 7786970 -191843180 + L1MD3 LINE L1 6804 7169 -826 2401 112 0 0 chr5 7786971 7787283 -191842867 + AluSx SINE Alu 1 312 0 795 231 36 12 chr5 7787283 7787530 -191842620 + L1 LINE L1 3776 4028 -2118 260 150 0 0 chr5 7787615 7787655 -191842495 + Alu SINE Alu 251 290 -10 315 300 0 0 chr5 7787674 7787764 -191842386 - L1MC4 LINE L1 -1339 6703 6614 2107 231 28 36 chr5 7787764 7788424 -191841726 + L1MD3 LINE L1 7108 7948 -34 189 0 0 0 chr5 7789925 7789946 -191840204 + (A)n Simple_repeat Simple_repeat 1 21 0 300 349 88 51 chr5 7792081 7792849 -191837301 + L1MEd LINE L1 48 844 -5275 2948 6 0 0 chr5 7793603 7793914 -191836236 - AluYa5 SINE Alu 0 311 1 235 308 19 28 chr5 7793945 7794052 -191836098 + MIR SINE MIR 97 202 -60 1797 71 0 8 chr5 7794081 7794320 -191835830 - L1PA6 LINE L1 -212 5942 5706 303 143 0 0 chr5 7794299 7794348 -191835802 + L1PA12 LINE L1 6120 6168 0 * 234 128 0 0 chr5 7794512 7794551 -191835599 + (CA)n Simple_repeat Simple_repeat 2 40 0 521 256 32 78 chr5 7794609 7794953 -191835197 + L1MEd LINE L1 908 1235 -4884 476 186 8 0 chr5 7795627 7795745 -191834405 + GA-rich Low_complexity Low_complexity 2 120 0 766 295 48 63 chr5 7795842 7796255 -191833895 + L1MCb LINE L1 1 407 -5638 1413 203 52 0 chr5 7796267 7796538 -191833612 + L1PB4 LINE L1 5869 6153 -3 3982 236 67 32 chr5 7796712 7799393 -191830757 + L1MCb LINE L1 569 3406 -3158 2628 177 107 169 chr5 7799554 7800005 -191830145 + L1MC3 LINE L1 6739 7216 -569 403 228 54 0 chr5 7800005 7800097 -191830053 + MLT1C LTR MaLR 35 131 -436 2628 177 107 169 chr5 7800097 7800668 -191829482 + L1MC3 LINE L1 7216 7783 -2 1866 121 0 4 chr5 7800733 7800990 -191829160 - AluSg SINE Alu -13 297 42 712 218 155 35 chr5 7800990 7801296 -191828854 - Zaphod DNA AcHobo -756 3275 2928 1282 246 53 40 chr5 7801416 7801499 -191828651 - Zaphod DNA AcHobo -1529 2502 2422 957 163 0 27 chr5 7801499 7801683 -191828467 - L1MA9 LINE L1 0 6312 6134 1282 246 53 40 chr5 7801683 7801791 -191828359 - Zaphod DNA AcHobo -1609 2422 2317 2478 91 0 0 chr5 7801791 7802100 -191828050 - AluY SINE Alu -2 309 1 1282 246 53 40 chr5 7802100 7802412 -191827738 - Zaphod DNA AcHobo -1714 2317 1991 234 233 33 0 chr5 7802462 7802522 -191827628 - Zaphod DNA AcHobo -2049 1982 1921 232 295 98 8 chr5 7802652 7802774 -191827376 - MIR SINE MIR -4 258 126 493 193 283 0 chr5 7803289 7803434 -191826716 - MER53 DNA DNA 0 189 4 261 0 0 0 chr5 7803692 7803721 -191826429 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 2040 189 23 25 chr5 7803747 7804180 -191825970 + Tigger2a DNA MER2_type 3 434 0 1037 189 99 128 chr5 7804259 7804541 -191825609 + MLT1C LTR MaLR 37 303 -164 2041 107 0 4 chr5 7804541 7804811 -191825339 + AluSq SINE Alu 1 269 -44 1037 189 99 128 chr5 7804811 7804972 -191825178 + MLT1C LTR MaLR 303 467 0 478 209 55 0 chr5 7806093 7806203 -191823947 - L1MA9 LINE L1 -385 5927 5812 796 154 83 6 chr5 7806204 7806233 -191823917 + L1MA9 LINE L1 6122 6147 -165 324 0 0 0 chr5 7806233 7806269 -191823881 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr5 7806268 7806289 -191823861 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 796 154 83 6 chr5 7806269 7806428 -191823722 + L1MA9 LINE L1 6147 6303 -9 811 272 27 5 chr5 7807972 7808196 -191821954 + MLT1C LTR MaLR 239 467 0 270 179 0 0 chr5 7810560 7810616 -191819534 + GA-rich Low_complexity Low_complexity 3 58 0 2314 107 3 3 chr5 7811917 7812226 -191817924 + AluSx SINE Alu 1 309 -3 1682 174 102 6 chr5 7812272 7812605 -191817545 + MLT1A1 LTR MaLR 1 365 0 251 228 0 0 chr5 7813745 7813802 -191816348 + T-rich Low_complexity Low_complexity 1 57 0 1133 224 82 55 chr5 7814205 7814585 -191815565 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr5 7817582 7817605 -191812545 + AT_rich Low_complexity Low_complexity 1 23 0 253 277 229 5 chr5 7817696 7817884 -191812266 + L1MC/D LINE L1 5574 5803 -2005 319 351 11 0 chr5 7818169 7818263 -191811887 + MIR SINE MIR 158 252 -10 2068 105 3 20 chr5 7818369 7818664 -191811486 + AluSx SINE Alu 9 298 -14 216 0 0 0 chr5 7822182 7822206 -191807944 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 867 246 65 35 chr5 7822245 7822615 -191807535 - LTR37A LTR ERV1 -7 419 39 201 267 19 95 chr5 7823003 7823108 -191807042 + MIR3 SINE MIR 74 170 -38 477 278 237 0 chr5 7824535 7824729 -191805421 + MIR SINE MIR 13 252 -10 752 276 24 42 chr5 7825825 7826158 -191803992 - LTR16B LTR ERVL -137 327 1 188 238 64 87 chr5 7827432 7827604 -191802546 + MER5C DNA MER1_type 21 188 -136 1962 109 0 4 chr5 7828775 7829042 -191801108 + AluSx SINE Alu 1 266 -46 273 214 135 11 chr5 7829799 7829888 -191800262 + LTR16C LTR ERVL 389 488 -3 1968 139 121 67 chr5 7830239 7830643 -191799507 + MSTA LTR MaLR 3 428 0 9230 154 22 54 chr5 7830643 7832348 -191797802 + MSTA-int LTR MaLR 1 1651 0 1898 177 138 5 chr5 7832348 7832726 -191797424 + MSTA LTR MaLR 1 428 0 1545 178 3 51 chr5 7832810 7833130 -191797020 - AluJo SINE Alu 0 312 7 473 124 16 141 chr5 7834195 7834316 -191795834 + MER20 DNA MER1_type 109 214 -5 360 217 179 0 chr5 7834396 7834502 -191795648 + LTR40a LTR ERVL 395 519 0 532 231 75 0 chr5 7835471 7835605 -191794545 + MER58B DNA MER1_type 197 340 -1 338 151 87 3 chr5 7836910 7837004 -191793146 - MLT1G LTR MaLR -393 156 13 256 306 0 14 chr5 7837684 7837756 -191792394 + L2 LINE L2 3200 3270 -2 268 353 0 0 chr5 7838094 7838210 -191791940 + (CA)n Simple_repeat Simple_repeat 1 116 0 264 59 0 0 chr5 7838227 7838261 -191791889 + (CA)n Simple_repeat Simple_repeat 2 35 0 259 253 40 80 chr5 7838733 7838833 -191791317 - Charlie4 DNA MER1_type 0 1961 1867 2334 102 0 3 chr5 7838833 7839136 -191791014 + AluSx SINE Alu 1 302 -10 259 253 40 80 chr5 7839136 7839185 -191790965 - Charlie4 DNA MER1_type -94 1867 1818 286 330 134 0 chr5 7840373 7840567 -191789583 - MIR SINE MIR -21 241 22 1138 248 42 45 chr5 7840732 7841179 -191788971 + MLT1D LTR MaLR 1 446 -59 1827 186 0 3 chr5 7841183 7841484 -191788666 + AluJb SINE Alu 6 305 -7 306 145 126 58 chr5 7841697 7841811 -191788339 - MER34 LTR ERV1 -6 536 433 327 315 12 85 chr5 7841868 7842214 -191787936 + MLT1I LTR MaLR 98 392 -17 224 320 70 0 chr5 7842230 7842330 -191787820 - L2 LINE L2 -862 2452 2346 326 275 167 0 chr5 7842886 7843006 -191787144 - L1ME4a LINE L1 -207 5914 5775 2040 142 7 3 chr5 7843015 7843324 -191786826 - AluSg SINE Alu 0 310 1 826 78 93 16 chr5 7843460 7843589 -191786561 + MER85 DNA T2_type 1 139 0 471 188 6 0 chr5 7845157 7845250 -191784900 + Tigger4(Zombi) DNA MER2_type 1 97 -2634 477 241 85 51 chr5 7846331 7846528 -191783622 + MIR SINE MIR 15 223 -39 255 61 0 0 chr5 7847746 7847779 -191782371 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 326 195 13 0 chr5 7847787 7847864 -191782286 + GA-rich Low_complexity Low_complexity 1 78 0 182 289 41 66 chr5 7848154 7848275 -191781875 + L2 LINE L2 2382 2499 -815 254 86 0 0 chr5 7848891 7848926 -191781224 - 5S rRNA rRNA -25 96 62 472 111 0 0 chr5 7848926 7848989 -191781161 + AluSc SINE Alu 155 217 -92 1190 229 28 76 chr5 7849441 7849912 -191780238 - MLT1C LTR MaLR -17 450 3 282 269 141 60 chr5 7850347 7850496 -191779654 + MIR3 SINE MIR 33 193 -15 1496 290 100 24 chr5 7853352 7854397 -191775753 + L1ME3A LINE L1 4964 6142 -28 633 248 135 66 chr5 7854398 7854788 -191775362 + MLT1D LTR MaLR 1 408 -59 590 119 0 12 chr5 7854791 7854875 -191775275 + AluS SINE Alu 2 84 -229 237 239 0 14 chr5 7854876 7854947 -191775203 + MLT1B LTR MaLR 321 390 0 219 210 43 70 chr5 7854984 7855056 -191775094 + MER5B DNA MER1_type 61 122 -56 383 360 77 31 chr5 7855211 7855731 -191774419 - L2 LINE L2 -2047 1267 724 1712 188 58 80 chr5 7857152 7857668 -191772482 - MLT1D LTR MaLR 0 505 1 4816 113 39 95 chr5 7858122 7859124 -191771026 + Tigger3b DNA MER2_type 2 947 -284 554 77 0 0 chr5 7859125 7859203 -191770947 - L1PA8 LINE L1 -1 6171 6094 1381 45 6 0 chr5 7859203 7859379 -191770771 + L1PA8A LINE L1 5689 5865 -266 1450 191 50 0 chr5 7859379 7859657 -191770493 + Tigger3b DNA MER2_type 940 1231 0 309 190 88 36 chr5 7862195 7862332 -191767818 + (TCTCTG)n Simple_repeat Simple_repeat 6 149 0 599 227 52 101 chr5 7862391 7862717 -191767433 + MLT1J LTR MaLR 138 447 -64 1144 252 61 48 chr5 7864504 7864895 -191765255 - MLT1C LTR MaLR 0 467 83 7311 18 0 0 chr5 7864895 7865717 -191764433 + L1PA3 LINE L1 5318 6139 -16 308 28 0 0 chr5 7865681 7865717 -191764433 + L1PA2 LINE L1 6104 6191 0 315 58 39 0 chr5 7865717 7865769 -191764381 + (TAAA)n Simple_repeat Simple_repeat 3 180 0 1144 252 61 48 chr5 7865769 7865832 -191764318 - MLT1C LTR MaLR -383 84 6 315 0 0 0 chr5 7865904 7865939 -191764211 + (CA)n Simple_repeat Simple_repeat 2 36 0 321 389 65 44 chr5 7868085 7868378 -191761772 - L2 LINE L2 -2 3270 2972 221 333 151 34 chr5 7868510 7868861 -191761289 - L2 LINE L2 -831 2483 2092 184 338 38 0 chr5 7868882 7868962 -191761188 - MER5A DNA MER1_type -100 89 7 246 285 58 44 chr5 7869050 7869187 -191760963 - L1MC/D LINE L1 -1959 5849 5711 1755 153 6 32 chr5 7869311 7869624 -191760526 + AluJo SINE Alu 3 307 -5 321 248 341 0 chr5 7870360 7870489 -191759661 + MIR SINE MIR 60 232 -30 1579 205 39 55 chr5 7872231 7872616 -191757534 + MLT1B LTR MaLR 1 379 -11 218 317 81 32 chr5 7872632 7872755 -191757395 - MER5A DNA MER1_type -26 163 35 226 284 63 0 chr5 7872801 7872896 -191757254 + MER5A DNA MER1_type 9 109 -80 270 309 90 71 chr5 7874519 7874930 -191755220 - L2 LINE L2 -24 3248 2830 200 265 193 12 chr5 7877668 7877751 -191752399 + MIR SINE MIR 50 147 -115 410 201 72 86 chr5 7878185 7878324 -191751826 + L2 LINE L2 3153 3289 -24 517 109 42 30 chr5 7879150 7879417 -191750733 + (CA)n Simple_repeat Simple_repeat 1 270 0 214 196 36 89 chr5 7881308 7881364 -191748786 + MIR3 SINE MIR 136 188 -20 2069 113 20 0 chr5 7881521 7881813 -191748337 + AluSx SINE Alu 1 298 -14 209 224 0 17 chr5 7882042 7882100 -191748050 + A-rich Low_complexity Low_complexity 4 60 0 2029 162 31 0 chr5 7882129 7882487 -191747663 + L1M2 LINE L1 5280 5648 -643 1890 135 3 33 chr5 7882488 7882844 -191747306 - MER4A LTR ERV1 0 664 261 629 101 10 20 chr5 7882844 7882943 -191747207 - MER4A LTR ERV1 -566 98 1 291 119 0 0 chr5 7882943 7882985 -191747165 + L1M2 LINE L1 5646 5687 -604 3542 109 35 7 chr5 7882985 7883524 -191746626 - MER41A LTR ERV1 0 554 1 298 62 0 0 chr5 7883526 7883574 -191746576 + L1MA7 LINE L1 6244 6291 0 233 29 0 29 chr5 7883676 7883711 -191746439 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 685 319 91 45 chr5 7884035 7884593 -191745557 + L1M4 LINE L1 2311 2894 -3252 434 213 0 21 chr5 7884624 7884718 -191745432 - MER94 DNA DNA -42 92 1 463 280 118 40 chr5 7885001 7885526 -191744624 + L1M4 LINE L1 3196 3761 -2385 680 252 19 0 chr5 7885540 7885699 -191744451 - MLT1G1 LTR MaLR -5 590 429 562 254 157 14 chr5 7885728 7886006 -191744144 - MLT1G1 LTR MaLR -251 344 27 1765 124 58 19 chr5 7886006 7886531 -191743619 - MER4A LTR ERV1 -1 663 1 502 272 37 88 chr5 7886583 7886755 -191743395 + L1M4 LINE L1 3791 3945 -2201 2097 95 3 0 chr5 7886755 7887033 -191743117 + AluSc SINE Alu 1 282 -27 189 94 0 0 chr5 7887033 7887065 -191743085 + (TTAAA)n Simple_repeat Simple_repeat 4 35 0 502 272 37 88 chr5 7887071 7887170 -191742980 + L1M4 LINE L1 3945 4048 -2098 1274 221 39 13 chr5 7887223 7887531 -191742619 - MLT1C LTR MaLR -151 316 1 2300 85 0 3 chr5 7887763 7888068 -191742082 + AluSc SINE Alu 1 304 -5 315 150 0 0 chr5 7888670 7888730 -191741420 + (ATG)n Simple_repeat Simple_repeat 3 62 0 212 0 36 0 chr5 7889260 7889288 -191740862 + (TTG)n Simple_repeat Simple_repeat 2 30 0 823 269 83 74 chr5 7889909 7890366 -191739784 - LTR16B LTR ERVL -3 461 1 351 0 0 0 chr5 7890384 7890423 -191739727 + (ATG)n Simple_repeat Simple_repeat 1 39 0 322 303 79 20 chr5 7890424 7890576 -191739574 - MIR SINE MIR -12 250 90 2703 3 0 13 chr5 7890822 7891134 -191739016 + AluYa5 SINE Alu 1 308 -3 2271 179 33 0 chr5 7891322 7891710 -191738440 + LTR39 LTR ERV1 1 401 -382 365 98 43 174 chr5 7891710 7891802 -191738348 + MADE1 DNA Mariner 1 80 0 1608 240 49 3 chr5 7891802 7892169 -191737981 + LTR39 LTR ERV1 400 783 0 182 348 0 0 chr5 7892218 7892264 -191737886 + L2 LINE L2 3210 3255 -17 2404 118 24 21 chr5 7893059 7893433 -191736717 + THE1C LTR MaLR 1 375 0 719 187 99 33 chr5 7893598 7893780 -191736370 + MER3 DNA MER1_type 11 204 -5 824 265 28 14 chr5 7893941 7894156 -191735994 + MIR SINE MIR 1 218 -44 203 246 271 16 chr5 7894388 7894510 -191735640 + L2 LINE L2 3117 3269 -3 1677 191 34 96 chr5 7894797 7895182 -191734968 - MLT1D LTR MaLR -6 499 154 1695 167 141 26 chr5 7895182 7895566 -191734584 + MSTA LTR MaLR 1 428 0 1677 191 34 96 chr5 7895566 7895710 -191734440 - MLT1D LTR MaLR -351 154 3 230 220 40 0 chr5 7896798 7896848 -191733302 - MLT1I LTR MaLR -130 279 228 483 260 68 56 chr5 7897749 7897918 -191732232 + MER46C DNA MER2_type 81 255 -83 1955 164 72 18 chr5 7897918 7898307 -191731843 - MLT2D LTR ERVL -4 410 1 483 260 68 56 chr5 7898307 7898387 -191731763 + MER46C DNA MER2_type 255 333 -5 334 263 91 0 chr5 7899176 7899275 -191730875 - MIR SINE MIR -69 193 86 997 238 124 46 chr5 7899438 7899850 -191730300 + MLT1C LTR MaLR 22 465 -2 279 239 57 34 chr5 7900581 7900669 -191729481 + MLT1I LTR MaLR 190 279 -130 186 189 0 0 chr5 7900967 7901004 -191729146 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 274 196 0 0 chr5 7901012 7901068 -191729082 - L1MC4 LINE L1 -1339 6703 6648 231 257 0 0 chr5 7901880 7901981 -191728169 + (TG)n Simple_repeat Simple_repeat 2 102 0 304 342 40 27 chr5 7902478 7902700 -191727450 - HAL1 LINE L1 -37 2470 2246 1102 308 139 35 chr5 7902906 7904175 -191725975 - HAL1 LINE L1 -354 2153 753 345 259 22 45 chr5 7904834 7904956 -191725194 - MIR3 SINE MIR -21 187 66 1258 232 30 46 chr5 7904994 7905364 -191724786 - MLT1A1 LTR MaLR -1 364 1 320 331 79 16 chr5 7905721 7905848 -191724302 - MIR3 SINE MIR -8 200 66 869 148 49 12 chr5 7906488 7906650 -191723500 + FRAM SINE Alu 1 165 -11 1968 114 3 20 chr5 7906713 7907011 -191723139 - AluSx SINE Alu -19 293 1 261 327 26 9 chr5 7907422 7907535 -191722615 + MIR3 SINE MIR 90 204 -4 213 20 0 102 chr5 7907615 7907664 -191722486 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 320 193 0 60 chr5 7910222 7910305 -191719845 + MLT1F1 LTR MaLR 55 132 -435 1937 206 63 20 chr5 7910305 7910611 -191719539 + L1MD3 LINE L1 7416 7752 -243 1305 199 15 103 chr5 7910611 7911009 -191719141 + MLT1A1 LTR MaLR 1 363 -2 1937 206 63 20 chr5 7911009 7911191 -191718959 + L1MD3 LINE L1 7752 7925 -70 378 162 0 0 chr5 7911275 7911343 -191718807 + L1MD3 LINE L1 7928 7995 0 185 195 0 24 chr5 7911925 7911966 -191718184 - L2 LINE L2 -3147 167 128 676 228 17 6 chr5 7913069 7913249 -191716901 + MER5A DNA MER1_type 4 185 -4 390 312 40 40 chr5 7913287 7913460 -191716690 - MER5B DNA MER1_type -5 173 1 256 267 95 95 chr5 7914292 7914513 -191715637 + L2 LINE L2 3014 3234 -38 21 0 0 0 chr5 7915141 7915162 -191714988 + AT_rich Low_complexity Low_complexity 1 21 0 866 264 47 12 chr5 7915176 7915520 -191714630 - L1MC4 LINE L1 0 8042 7687 21 0 0 0 chr5 7915548 7915569 -191714581 + AT_rich Low_complexity Low_complexity 1 21 0 1261 159 25 107 chr5 7915577 7915904 -191714246 - AluYb8 SINE Alu -18 300 1 192 135 0 0 chr5 7916073 7916110 -191714040 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 200 282 55 55 chr5 7916422 7916532 -191713618 - MIR SINE MIR -139 123 14 1272 209 147 34 chr5 7916588 7916995 -191713155 - MLT1C LTR MaLR -9 458 6 525 182 20 0 chr5 7917000 7917099 -191713051 - MLT2C1 LTR ERVL -293 104 4 207 273 91 23 chr5 7918441 7918529 -191711621 + MIR SINE MIR 35 128 -80 209 256 0 0 chr5 7918555 7918598 -191711552 + MIR SINE MIR 86 128 -80 744 128 105 45 chr5 7919269 7919402 -191710748 + MER1B DNA MER1_type 1 141 -156 513 118 0 0 chr5 7919402 7919470 -191710680 + MER1B DNA MER1_type 74 141 -156 1594 141 23 19 chr5 7919470 7919733 -191710417 + MER1B DNA MER1_type 74 337 -2 200 293 40 13 chr5 7920017 7920092 -191710058 + L3 LINE CR1 460 536 -1041 306 145 24 76 chr5 7920671 7920789 -191709361 + MER20 DNA MER1_type 5 157 -62 207 0 0 0 chr5 7920791 7920814 -191709336 + (CACCC)n Simple_repeat Simple_repeat 2 24 0 1469 166 28 110 chr5 7921673 7922100 -191708050 - MLT1B LTR MaLR 0 505 1 995 208 55 128 chr5 7923186 7923346 -191706804 + MLT1C LTR MaLR 8 178 -289 2180 101 10 0 chr5 7923346 7923652 -191706498 + AluSc SINE Alu 1 309 0 995 208 55 128 chr5 7923652 7923982 -191706168 + MLT1C LTR MaLR 178 462 -5 728 119 8 0 chr5 7924114 7924232 -191705918 + (GGAA)n Simple_repeat Simple_repeat 2 120 0 210 37 0 0 chr5 7924226 7924253 -191705897 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 * 1914 117 14 0 chr5 7924264 7924546 -191705604 + AluSc SINE Alu 9 294 -15 1895 102 0 38 chr5 7924619 7924956 -191705194 - AluY SINE Alu 0 326 1 259 254 79 79 chr5 7926153 7926318 -191703832 - MER5B DNA MER1_type -7 171 7 218 217 0 17 chr5 7926365 7926425 -191703725 + CT-rich Low_complexity Low_complexity 3 61 0 763 119 23 28 chr5 7926451 7926627 -191703523 + CT-rich Low_complexity Low_complexity 2 176 0 1682 172 0 0 chr5 7927564 7927873 -191702277 + AluJo SINE Alu 5 313 0 328 266 40 102 chr5 7928079 7928256 -191701894 - L1MC4 LINE L1 -1338 6704 6539 265 279 0 0 chr5 7928283 7928351 -191701799 + (TGGA)n Simple_repeat Simple_repeat 3 70 0 1982 128 3 0 chr5 7928410 7928707 -191701443 + AluSx SINE Alu 1 298 -14 742 175 139 0 chr5 7928975 7929112 -191701038 + AluJb SINE Alu 31 186 -126 986 243 9 0 chr5 7929231 7929441 -191700709 + MER20 DNA MER1_type 2 213 -6 260 253 126 0 chr5 7929567 7929654 -191700496 - MIR SINE MIR -72 190 93 276 200 0 0 chr5 7930151 7930211 -191699939 + GA-rich Low_complexity Low_complexity 2 61 0 5259 130 19 50 chr5 7930369 7930608 -191699542 - L1MA5A LINE L1 -5 6292 6047 2030 143 18 21 chr5 7930608 7930943 -191699207 + MER1B DNA MER1_type 4 337 0 5259 130 19 50 chr5 7930943 7931198 -191698952 - L1MA5A LINE L1 -250 6047 5786 1746 117 0 4 chr5 7931198 7931455 -191698695 - AluSx SINE Alu -18 294 39 5259 130 19 50 chr5 7931455 7931906 -191698244 - L1MA5A LINE L1 -511 5786 5375 185 300 67 33 chr5 7932743 7932863 -191697287 - L2 LINE L2 -19 3294 3171 1096 178 6 10 chr5 7933391 7933733 -191696417 - MLT1B LTR MaLR 0 390 1 2192 101 0 0 chr5 7935065 7935361 -191694789 - AluSx SINE Alu -16 296 1 285 29 0 0 chr5 7936890 7936924 -191693226 + (TC)n Simple_repeat Simple_repeat 1 34 0 2419 222 30 29 chr5 7937348 7937973 -191692177 + L1ME2 LINE L1 5535 6160 -4 1992 128 0 10 chr5 7937997 7938295 -191691855 - AluSx SINE Alu -17 295 1 866 142 64 0 chr5 7939179 7939320 -191690830 + FRAM SINE Alu 1 146 -30 25 31 0 0 chr5 7939330 7939362 -191690788 + AT_rich Low_complexity Low_complexity 1 32 0 2002 101 0 14 chr5 7939380 7939656 -191690494 - AluSx SINE Alu -40 272 1 29 0 0 0 chr5 7940073 7940102 -191690048 + AT_rich Low_complexity Low_complexity 1 29 0 293 374 20 20 chr5 7940213 7940416 -191689734 + ERVL LTR ERVL 429 631 -5133 368 274 226 12 chr5 7940871 7941035 -191689115 + MLT1J LTR MaLR 1 199 -312 252 301 96 20 chr5 7941332 7941478 -191688672 - MER117 DNA MER1_type -37 160 4 655 248 125 80 chr5 7941670 7942110 -191688040 - LTR67 LTR ERVL 0 557 98 310 233 0 14 chr5 7942134 7942207 -191687943 - MLT1G3 LTR MaLR 0 567 496 6257 134 29 2 chr5 7942209 7942321 -191687829 - L1PA14 LINE L1 -2 6159 6052 2629 99 0 25 chr5 7942321 7942685 -191687465 - THE1A LTR MaLR 0 355 1 6257 134 29 2 chr5 7942685 7944488 -191685662 - L1PA14 LINE L1 -109 6052 4144 1066 243 125 33 chr5 7944536 7944979 -191685171 - MLT1G3 LTR MaLR -61 469 4 229 299 0 26 chr5 7945097 7945174 -191684976 + C-rich Low_complexity Low_complexity 1 75 0 218 306 74 25 chr5 7945221 7945342 -191684808 + MIR3 SINE MIR 30 156 -52 782 306 31 5 chr5 7945576 7945798 -191684352 + MIR SINE MIR 13 240 -22 430 215 145 50 chr5 7946859 7947101 -191683049 - L1ME4a LINE L1 -137 5984 5720 1817 114 0 43 chr5 7947226 7947565 -191682585 - AluSx SINE Alu 0 340 14 220 281 116 42 chr5 7947918 7948101 -191682049 + MIR SINE MIR 17 208 -48 257 50 0 25 chr5 7948206 7948246 -191681904 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 795 48 59 12 chr5 7948788 7949183 -191680967 + (CA)n Simple_repeat Simple_repeat 1 413 0 677 94 48 27 chr5 7949203 7949729 -191680421 + (CA)n Simple_repeat Simple_repeat 1 537 0 194 0 0 37 chr5 7950064 7950091 -191680059 + (TTCG)n Simple_repeat Simple_repeat 4 29 0 38 68 0 0 chr5 7950139 7950212 -191679938 + GC_rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr5 7950610 7950638 -191679512 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 7950652 7950676 -191679474 + GC_rich Low_complexity Low_complexity 1 24 0 326 330 0 58 chr5 7950919 7951110 -191679040 + C-rich Low_complexity Low_complexity 1 180 0 289 303 9 28 chr5 7952489 7952598 -191677552 - MIR3 SINE MIR 0 208 102 25 0 0 0 chr5 7953687 7953712 -191676438 + AT_rich Low_complexity Low_complexity 1 25 0 184 167 44 167 chr5 7954543 7954633 -191675517 - MIR SINE MIR -120 142 64 243 152 0 0 chr5 7955051 7955097 -191675053 + (CA)n Simple_repeat Simple_repeat 1 46 0 1823 141 7 7 chr5 7955245 7955535 -191674615 - AluJo SINE Alu -22 290 1 1787 133 14 30 chr5 7955563 7955903 -191674247 - MLT1B LTR MaLR 0 390 1 482 276 41 29 chr5 7956881 7957051 -191673099 - MER5B DNA MER1_type 0 178 7 193 226 123 66 chr5 7957427 7957533 -191672617 - L2 LINE L2 -23 3290 3179 559 258 16 63 chr5 7958919 7959109 -191671041 - MIR SINE MIR -19 243 63 1538 212 76 42 chr5 7960866 7961314 -191668836 - Charlie4a DNA MER1_type -42 466 4 186 281 152 47 chr5 7961502 7961673 -191668477 + MIR SINE MIR 64 252 -10 2332 53 0 0 chr5 7964951 7965279 -191664871 - AluY SINE Alu 0 328 1 808 88 0 18 chr5 7965327 7965441 -191664709 - AluSp/q SINE Alu -17 296 185 1931 144 3 0 chr5 7966334 7966633 -191663517 - AluSx SINE Alu -6 306 7 269 326 0 0 chr5 7967342 7967428 -191662722 + CT-rich Low_complexity Low_complexity 1 86 0 237 111 0 63 chr5 7968504 7968567 -191661583 + (TCCC)n Simple_repeat Simple_repeat 2 60 0 1771 171 45 19 chr5 7968609 7968983 -191661167 - MLT1B LTR MaLR -3 387 4 262 219 42 0 chr5 7970712 7970808 -191659342 + (TA)n Simple_repeat Simple_repeat 1 100 0 310 267 0 40 chr5 7970848 7970949 -191659201 + L1MC4 LINE L1 6608 6704 -1338 188 322 0 78 chr5 7971149 7971239 -191658911 - L3 LINE CR1 -1139 438 356 195 184 0 0 chr5 7971850 7971888 -191658262 + (CA)n Simple_repeat Simple_repeat 2 39 0 448 246 62 61 chr5 7972148 7972314 -191657836 - L1ME LINE L1 -455 5666 5495 1480 231 73 31 chr5 7972565 7973108 -191657042 - MLT1F1 LTR MaLR -1 566 1 435 373 97 35 chr5 7973776 7974572 -191655578 - L1ME LINE L1 -764 5382 4657 384 148 59 2 chr5 7974802 7974891 -191655259 - MLT1J2 LTR MaLR -309 141 68 210 333 114 40 chr5 7975768 7975969 -191654181 + MIR SINE MIR 21 236 -26 243 328 113 41 chr5 7976176 7976371 -191653779 + MIR SINE MIR 22 230 -32 485 327 23 32 chr5 7981521 7981738 -191648412 + MIR SINE MIR 16 230 -32 1500 228 85 7 chr5 7983259 7983684 -191646466 + MLT1C LTR MaLR 6 463 -4 554 243 36 0 chr5 7983945 7984085 -191646065 + MER20 DNA MER1_type 7 151 -68 2175 105 0 10 chr5 7984497 7984801 -191645349 + AluSx SINE Alu 1 301 -11 329 354 0 19 chr5 7986373 7986534 -191643616 + (CA)n Simple_repeat Simple_repeat 1 158 0 837 266 19 9 chr5 7987394 7987608 -191642542 - MIR SINE MIR 0 262 47 326 91 18 0 chr5 7987642 7987697 -191642453 + (CA)n Simple_repeat Simple_repeat 2 57 0 262 369 110 28 chr5 7987737 7988054 -191642096 + L2 LINE L2 2929 3271 -1 971 216 53 0 chr5 7988100 7988308 -191641842 + MER20 DNA MER1_type 1 219 0 189 74 0 0 chr5 7988432 7988459 -191641691 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 1593 169 23 36 chr5 7989858 7990166 -191639984 + AluJo SINE Alu 1 304 -8 1724 140 20 3 chr5 7990495 7990788 -191639362 + AluJo SINE Alu 12 309 -3 256 228 18 0 chr5 7995831 7995888 -191634262 + MIR SINE MIR 82 139 -69 2102 129 67 14 chr5 7999350 7999706 -191630444 + THE1C LTR MaLR 1 375 0 533 171 7 110 chr5 8001431 8001502 -191628648 + MLT1C LTR MaLR 337 414 -53 206 32 32 0 chr5 8001502 8001533 -191628617 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1718 94 109 8 chr5 8001538 8001794 -191628356 - AluSc SINE Alu -27 282 1 533 171 7 110 chr5 8001794 8001862 -191628288 + MLT1C LTR MaLR 418 467 0 700 123 0 15 chr5 8002558 8002688 -191627462 + (TGGA)n Simple_repeat Simple_repeat 2 129 0 1158 133 4 4 chr5 8002701 8002944 -191627206 + (TGGA)n Simple_repeat Simple_repeat 1 243 0 1605 213 79 86 chr5 8004496 8005068 -191625082 + MLT1E1 LTR MaLR 63 630 -24 2290 86 3 3 chr5 8005080 8005384 -191624766 - L1PB1 LINE L1 -5 6146 5843 236 259 0 0 chr5 8005385 8005439 -191624711 + MLT1E3 LTR MaLR 554 607 -17 3525 121 11 15 chr5 8005804 8006333 -191623817 - MER1A DNA MER1_type 0 527 1 644 264 85 59 chr5 8007484 8008129 -191622021 + L1MEc LINE L1 863 1524 -4872 1963 108 7 27 chr5 8008154 8008449 -191621701 + AluSx SINE Alu 1 289 -23 738 259 145 55 chr5 8008599 8009328 -191620822 + L1MEc LINE L1 3250 4044 -2171 261 270 15 44 chr5 8009361 8009498 -191620652 + L1ME3A LINE L1 6038 6170 0 210 185 37 19 chr5 8009984 8010092 -191620058 + (TG)n Simple_repeat Simple_repeat 1 110 0 247 235 17 43 chr5 8010101 8010256 -191619894 + (TATTG)n Simple_repeat Simple_repeat 1 150 0 311 323 36 52 chr5 8010274 8010632 -191619518 + L3 LINE CR1 1094 1490 -87 378 138 90 2 chr5 8011676 8011774 -191618376 + L1ME3A LINE L1 5689 5802 -376 1576 179 113 24 chr5 8011781 8012116 -191618034 - MLT1A1 LTR MaLR 0 365 1 952 254 12 75 chr5 8012116 8012218 -191617932 + L1ME3A LINE L1 5805 5912 -258 2448 43 3 13 chr5 8012218 8012521 -191617629 + AluY SINE Alu 1 300 -11 952 254 12 75 chr5 8012521 8012590 -191617560 + L1ME3A LINE L1 5912 5984 -186 2535 105 18 37 chr5 8012590 8012813 -191617337 - THE1C LTR MaLR 0 375 160 2121 113 0 0 chr5 8012813 8013105 -191617045 + AluSx SINE Alu 3 294 -18 2535 105 18 37 chr5 8013105 8013263 -191616887 - THE1C LTR MaLR -215 160 1 952 254 12 75 chr5 8013263 8013424 -191616726 + L1ME3A LINE L1 5984 6117 -53 306 228 43 33 chr5 8013606 8013698 -191616452 - MIR3 SINE MIR 0 208 116 637 256 12 18 chr5 8013746 8013910 -191616240 + MER5B DNA MER1_type 1 163 -15 192 346 140 37 chr5 8014609 8014823 -191615327 - MIR SINE MIR -19 243 8 2146 154 15 62 chr5 8015188 8015654 -191614496 + MER65A LTR ERV1 1 444 -1 1007 196 50 23 chr5 8015722 8015982 -191614168 + L1MB4 LINE L1 5914 6180 0 225 319 146 21 chr5 8016464 8016608 -191613542 - L2 LINE L2 -1870 1444 1283 258 136 0 0 chr5 8017367 8017411 -191612739 + (CA)n Simple_repeat Simple_repeat 1 44 0 695 236 154 5 chr5 8017430 8017625 -191612525 - MER58A DNA MER1_type 0 224 1 432 193 44 44 chr5 8017630 8017765 -191612385 + L1ME4a LINE L1 5982 6116 -5 769 189 43 49 chr5 8018739 8018924 -191611226 - MER20 DNA MER1_type 0 219 36 392 220 347 0 chr5 8019316 8019466 -191610684 + Charlie8 DNA MER1_type 70 271 -2146 430 296 58 32 chr5 8019761 8019950 -191610200 + MIR3 SINE MIR 12 205 -3 781 257 61 14 chr5 8019952 8020166 -191609984 - MER58A DNA MER1_type 0 224 1 493 243 90 7 chr5 8020290 8020434 -191609716 + L1MD2 LINE L1 6194 6349 -10 180 0 0 0 chr5 8020473 8020493 -191609657 + (TG)n Simple_repeat Simple_repeat 1 20 0 1859 153 0 0 chr5 8020493 8020821 -191609329 - AluJb SINE Alu 0 328 1 418 136 45 34 chr5 8021748 8021924 -191608226 + (CA)n Simple_repeat Simple_repeat 2 179 0 204 189 33 56 chr5 8021924 8022014 -191608136 + (CATA)n Simple_repeat Simple_repeat 1 88 0 375 154 47 24 chr5 8022014 8022183 -191607967 + (CA)n Simple_repeat Simple_repeat 2 174 0 255 333 30 30 chr5 8022664 8022796 -191607354 + MER5A DNA MER1_type 44 175 -14 2301 172 66 48 chr5 8023325 8023826 -191606324 - MLT2B2 LTR ERVL 0 515 6 2128 100 30 0 chr5 8023939 8024240 -191605910 - AluSx SINE Alu -2 310 1 549 305 69 24 chr5 8024240 8024486 -191605664 + L1ME LINE L1 4303 4559 -1587 2034 102 3 11 chr5 8024902 8025227 -191604923 + AluSq SINE Alu 1 323 0 405 332 144 24 chr5 8025540 8025805 -191604345 + L1ME LINE L1 5313 5617 -547 2058 147 129 5 chr5 8025805 8026186 -191603964 - MSTC LTR MaLR 0 428 1 405 332 144 24 chr5 8026186 8026212 -191603938 + L1ME LINE L1 5617 5639 -525 1736 146 3 17 chr5 8026212 8026537 -191603613 + AluJo SINE Alu 1 312 0 831 188 27 80 chr5 8026563 8026787 -191603363 + MER20 DNA MER1_type 1 212 -7 371 220 26 63 chr5 8026791 8026934 -191603216 + L1P3 LINE L1 5645 5785 -369 505 172 0 11 chr5 8027503 8027590 -191602560 + AluJo SINE Alu 89 174 -138 2025 183 30 34 chr5 8027663 8028128 -191602022 - MLT1C LTR MaLR -2 465 3 2105 159 0 38 chr5 8028403 8028645 -191601505 - MLT1A1 LTR MaLR 0 365 140 2236 99 0 0 chr5 8028645 8028947 -191601203 + AluSc SINE Alu 1 302 -7 2105 159 0 38 chr5 8028947 8029074 -191601076 - MLT1A1 LTR MaLR -225 140 10 2269 87 0 13 chr5 8029582 8029891 -191600259 + AluSc SINE Alu 1 305 -4 384 191 56 0 chr5 8031560 8031649 -191598501 + L1M4 LINE L1 5250 5343 -803 325 261 105 39 chr5 8032337 8032490 -191597660 + LTR23 LTR ERV1 275 437 0 517 188 70 48 chr5 8032931 8033105 -191597045 - L1MB7 LINE L1 -31 6135 5942 862 279 14 41 chr5 8033109 8033471 -191596679 + L1M4 LINE L1 5410 5761 -417 231 329 168 7 chr5 8033716 8033865 -191596285 - MIR SINE MIR -78 184 12 1643 210 68 23 chr5 8034350 8034789 -191595361 + MLT1C LTR MaLR 8 466 -1 201 354 122 0 chr5 8035089 8035171 -191594979 + MIR SINE MIR 149 240 -22 227 215 15 0 chr5 8035633 8035698 -191594452 + (CA)n Simple_repeat Simple_repeat 2 67 0 204 302 35 86 chr5 8035811 8035927 -191594223 - L2 LINE L2 -194 3078 2969 376 238 166 0 chr5 8036389 8036540 -191593610 - MER91A DNA MER1_type -4 192 17 291 292 184 0 chr5 8037523 8037691 -191592459 + LTR53 LTR ERVL 3 201 -318 * 1584 232 84 9 chr5 8037689 8038116 -191592034 + MER68 LTR ERV1 104 562 0 2117 168 55 2 chr5 8038623 8039027 -191591123 - MSTB LTR MaLR 0 426 2 442 249 87 22 chr5 8039028 8039257 -191590893 + MER74B LTR ERVL 227 470 -152 1991 102 16 26 chr5 8039501 8039805 -191590345 + AluSg SINE Alu 1 301 -9 1510 159 73 14 chr5 8041565 8041854 -191588296 + AluJo SINE Alu 1 306 -6 689 183 15 8 chr5 8041948 8042079 -191588071 + MER47A DNA MER2_type 24 155 -211 2159 134 119 0 chr5 8042081 8042468 -191587682 - L1MA4 LINE L1 -262 6038 5606 540 230 79 0 chr5 8042471 8042623 -191587527 + L1MA4 LINE L1 6084 6247 -53 735 184 184 14 chr5 8042623 8042835 -191587315 + MER47A DNA MER2_type 119 366 0 1452 261 87 18 chr5 8043529 8043720 -191586430 + L1M4 LINE L1 2128 2304 -3842 330 67 0 0 chr5 8043720 8043765 -191586385 + (TA)n Simple_repeat Simple_repeat 1 45 0 1488 194 3 3 chr5 8043765 8044058 -191586092 - AluJb SINE Alu -3 309 17 1452 261 87 18 chr5 8044058 8044487 -191585663 + L1M4 LINE L1 2303 2792 -3354 1495 179 30 0 chr5 8044678 8044941 -191585209 - MSTB1 LTR MaLR -160 272 2 791 103 0 0 chr5 8045102 8045209 -191584941 + AluSg/x SINE Alu 191 297 -15 657 238 57 5 chr5 8045768 8045961 -191584189 - L1MD3 LINE L1 0 7995 7793 228 149 0 43 chr5 8045987 8046034 -191584116 + MLT1L LTR MaLR 567 611 -4 616 316 126 49 chr5 8046684 8047335 -191582815 + L1M4 LINE L1 3716 4416 -1730 1992 144 33 11 chr5 8047621 8047982 -191582168 - L1PA13 LINE L1 -1 6162 5794 19216 100 9 30 chr5 8048495 8051253 -191578897 + Charlie3 DNA MER1_type 1 2700 -10 269 267 6 0 chr5 8051328 8051504 -191578646 + (CA)n Simple_repeat Simple_repeat 1 177 0 439 311 0 16 chr5 8051542 8051725 -191578425 + (CA)n Simple_repeat Simple_repeat 1 180 0 264 291 0 0 chr5 8051765 8051940 -191578210 + (CA)n Simple_repeat Simple_repeat 2 176 0 1977 106 19 13 chr5 8052045 8052356 -191577794 + L1PA13 LINE L1 5847 6159 -4 417 288 128 49 chr5 8052940 8053166 -191576984 + MIR SINE MIR 17 260 -2 360 294 91 16 chr5 8054602 8054789 -191575361 + L3 LINE CR1 1066 1266 -311 366 302 72 29 chr5 8055845 8056222 -191573928 - L1MDa LINE L1 -3443 3097 2705 415 167 0 0 chr5 8056255 8056327 -191573823 + MER116 DNA Mariner 6 77 -3 278 239 71 16 chr5 8056344 8056505 -191573645 - L1MDa LINE L1 -3959 2581 2480 1049 153 36 31 chr5 8056650 8056846 -191573304 + MER3 DNA MER1_type 13 209 0 301 167 0 0 chr5 8056803 8056851 -191573299 - MER3 DNA MER1_type -119 90 43 * 597 318 135 56 chr5 8057034 8057762 -191572388 - L1MDa LINE L1 -833 2068 1137 186 143 0 0 chr5 8057806 8057841 -191572309 + (T)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 8058474 8058496 -191571654 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 8059250 8059272 -191570878 + AT_rich Low_complexity Low_complexity 1 22 0 379 270 50 0 chr5 8059509 8059609 -191570541 - MIR3 SINE MIR -4 204 100 254 323 38 70 chr5 8060193 8060379 -191569771 - MIR SINE MIR -37 225 46 297 256 185 31 chr5 8060425 8060620 -191569530 + L2 LINE L2 2828 3052 -220 2108 105 0 3 chr5 8062057 8062351 -191567799 + AluSx SINE Alu 1 293 -19 341 260 77 19 chr5 8063125 8063229 -191566921 + MIR SINE MIR 34 143 -119 207 197 13 26 chr5 8063878 8063954 -191566196 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 461 319 24 0 chr5 8064222 8064391 -191565759 - MER63A DNA MER1_type -37 173 1 2406 219 56 26 chr5 8065039 8065692 -191564458 - L1ME1 LINE L1 -5 6230 5553 1975 123 0 38 chr5 8065692 8066009 -191564141 - AluSx SINE Alu -7 305 1 2406 219 56 26 chr5 8066009 8066048 -191564102 - L1ME1 LINE L1 -682 5553 5517 765 248 50 31 chr5 8066127 8066483 -191563667 - L1ME1 LINE L1 -3766 2480 2108 27 0 0 0 chr5 8067167 8067194 -191562956 + AT_rich Low_complexity Low_complexity 1 27 0 4707 54 7 3 chr5 8067194 8067772 -191562378 - L1PA5 LINE L1 -4 6150 5571 1276 270 101 24 chr5 8068064 8068560 -191561590 - MER90 LTR ERV1 0 614 81 231 105 35 53 chr5 8069138 8069195 -191560955 + A-rich Low_complexity Low_complexity 3 58 0 396 264 31 78 chr5 8069860 8070053 -191560097 + MLT1J2 LTR MaLR 267 450 0 244 198 238 8 chr5 8072769 8072895 -191557255 + LTR33A LTR ERVL 318 472 -51 2139 182 33 12 chr5 8073839 8074263 -191555887 + L1MC1 LINE L1 5899 6331 -2 198 174 0 0 chr5 8074478 8074524 -191555626 + (CA)n Simple_repeat Simple_repeat 1 46 0 478 317 79 72 chr5 8074647 8075092 -191555058 - L1 LINE L1 -817 5329 4882 302 280 68 49 chr5 8075115 8075379 -191554771 - L1 LINE L1 -1316 4830 4562 21 0 0 0 chr5 8075991 8076012 -191554138 + AT_rich Low_complexity Low_complexity 1 21 0 1247 232 69 12 chr5 8078311 8078630 -191551520 - MER58B DNA MER1_type -4 337 1 456 313 46 26 chr5 8078878 8079073 -191551077 - MIR SINE MIR 0 262 64 307 227 21 0 chr5 8080071 8080168 -191549982 + (CA)n Simple_repeat Simple_repeat 1 99 0 608 208 17 6 chr5 8080194 8080372 -191549778 + (CA)n Simple_repeat Simple_repeat 1 180 0 238 300 29 0 chr5 8080374 8080444 -191549706 + (CACG)n Simple_repeat Simple_repeat 1 72 0 393 250 17 0 chr5 8080444 8080616 -191549534 + (CA)n Simple_repeat Simple_repeat 1 175 0 190 255 21 0 chr5 8080638 8080732 -191549418 + (CA)n Simple_repeat Simple_repeat 1 96 0 1426 207 63 17 chr5 8081203 8081551 -191548599 + MLT2D LTR ERVL 1 364 -50 291 28 0 0 chr5 8081579 8081615 -191548535 + (TG)n Simple_repeat Simple_repeat 2 37 0 209 108 27 0 chr5 8081855 8081892 -191548258 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 664 274 21 11 chr5 8083639 8083825 -191546325 + MIR SINE MIR 65 252 -10 223 255 0 0 chr5 8084421 8084472 -191545678 + A-rich Low_complexity Low_complexity 2 52 0 1677 177 76 0 chr5 8085003 8085319 -191544831 + MSTB LTR MaLR 87 426 0 392 55 103 7 chr5 8085515 8085660 -191544490 + (TA)n Simple_repeat Simple_repeat 1 159 0 517 248 15 7 chr5 8087216 8087353 -191542797 - LTR41 LTR ERVL -618 155 18 463 276 247 17 chr5 8087394 8087738 -191542412 - L2 LINE L2 -71 3242 2820 513 349 0 0 chr5 8087746 8087921 -191542229 + (TG)n Simple_repeat Simple_repeat 1 175 0 987 260 72 16 chr5 8088138 8088442 -191541708 - L2 LINE L2 -512 2802 2482 800 83 0 0 chr5 8092059 8092168 -191537982 - AluY SINE Alu -13 298 190 556 69 0 0 chr5 8092168 8092240 -191537910 - AluY SINE Alu -47 264 193 2150 28 47 0 chr5 8092240 8092494 -191537656 - AluY SINE Alu -44 267 2 371 178 122 11 chr5 8093197 8093287 -191536863 - MLT1J LTR MaLR 0 511 412 543 270 22 22 chr5 8093479 8093657 -191536493 - MLT1J LTR MaLR -330 181 4 1036 249 160 15 chr5 8093737 8094138 -191536012 - LTR40b LTR ERVL 0 462 4 189 281 104 21 chr5 8095041 8095137 -191535013 - MIR3 SINE MIR -28 180 77 502 283 83 86 chr5 8095269 8095690 -191534460 + L2 LINE L2 2848 3267 -5 473 245 64 56 chr5 8095860 8096063 -191534087 - MIR SINE MIR -55 207 3 184 246 290 14 chr5 8096430 8096568 -191533582 - MER5B DNA MER1_type 0 178 3 182 191 0 32 chr5 8097040 8097103 -191533047 + GA-rich Low_complexity Low_complexity 4 64 0 1430 160 9 4 chr5 8097183 8097414 -191532736 - AluSg/x SINE Alu -14 298 67 234 0 0 0 chr5 8097441 8097467 -191532683 + (CA)n Simple_repeat Simple_repeat 2 27 0 563 329 68 39 chr5 8098152 8098201 -191531949 - L1M4 LINE L1 -2970 3176 3130 2560 60 3 0 chr5 8098201 8098501 -191531649 + AluY SINE Alu 1 301 -10 563 329 68 39 chr5 8098501 8098864 -191531286 - L1M4 LINE L1 -3016 3130 2752 728 169 29 0 chr5 8098983 8099155 -191530995 + GA-rich Low_complexity Low_complexity 4 180 0 504 106 0 64 chr5 8099308 8099402 -191530748 - FLAM_A SINE Alu 0 142 55 235 299 39 24 chr5 8099657 8099784 -191530366 + MLT2F LTR ERVL 2 130 -533 487 240 76 55 chr5 8099818 8100093 -191530057 + MLT2F LTR ERVL 234 514 -149 634 192 41 7 chr5 8100542 8100688 -191529462 - MER20 DNA MER1_type -66 153 3 401 223 18 9 chr5 8101062 8101174 -191528976 + MER89 LTR ERV1 447 559 0 540 219 48 37 chr5 8101403 8101590 -191528560 - MER53 DNA DNA 0 189 1 527 245 82 55 chr5 8102302 8102559 -191527591 + LTR37B LTR ERV1 141 404 -64 2396 97 0 3 chr5 8102764 8103064 -191527086 + AluSg SINE Alu 1 299 -11 2555 65 10 0 chr5 8103066 8103374 -191526776 + AluY SINE Alu 1 311 0 190 0 67 0 chr5 8104113 8104143 -191526007 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 1695 191 13 34 chr5 8104262 8104632 -191525518 - MLT2C1 LTR ERVL -20 534 9 1074 183 0 11 chr5 8104636 8104822 -191525328 + AluJb SINE Alu 119 302 -10 2200 138 33 33 chr5 8106596 8106958 -191523192 - THE1B LTR MaLR 0 364 3 614 289 87 24 chr5 8107557 8107855 -191522295 - L1MC4a LINE L1 -1914 5894 5578 1383 220 79 86 chr5 8108399 8108971 -191521179 + MLT1E1 LTR MaLR 63 630 -24 2297 88 3 3 chr5 8108980 8109287 -191520863 - L1PB1 LINE L1 -2 6149 5843 225 259 0 0 chr5 8109288 8109342 -191520808 + MLT1E3 LTR MaLR 554 607 -17 1015 234 52 101 chr5 8109496 8109980 -191520170 - MLT1C LTR MaLR -2 465 6 183 42 0 0 chr5 8112226 8112250 -191517900 + (CAGCC)n Simple_repeat Simple_repeat 1 24 0 741 223 60 30 chr5 8112328 8112561 -191517589 + MLT1D LTR MaLR 8 247 -258 587 238 131 0 chr5 8112602 8112762 -191517388 + MLT1D LTR MaLR 325 505 0 1973 153 124 3 chr5 8112798 8113176 -191516974 + MSTA LTR MaLR 1 424 -4 216 307 98 42 chr5 8114565 8114964 -191515186 + L2 LINE L2 2647 3110 -203 1675 236 29 45 chr5 8115033 8115189 -191514961 - MER65B LTR ERV1 -22 509 352 2066 45 16 0 chr5 8115189 8115433 -191514717 - AluY SINE Alu -2 309 62 1675 236 29 45 chr5 8115433 8115713 -191514437 - MER65B LTR ERV1 -179 352 80 2510 118 47 35 chr5 8115713 8116136 -191514014 - MSTA LTR MaLR 0 428 1 1675 236 29 45 chr5 8116136 8116215 -191513935 - MER65B LTR ERV1 -451 80 1 1251 275 22 6 chr5 8116215 8116579 -191513571 - MER65B-int LTR ERV1 0 4871 4502 2190 110 0 42 chr5 8116669 8116947 -191513203 + AluSq SINE Alu 1 266 -47 2444 57 14 7 chr5 8116947 8117243 -191512907 + AluY SINE Alu 1 298 -13 2190 110 0 42 chr5 8117243 8117274 -191512876 + AluSq SINE Alu 266 297 -16 1315 257 81 19 chr5 8117596 8117966 -191512184 - MER65B-int LTR ERV1 -850 4021 3629 563 188 5 6 chr5 8117972 8118095 -191512055 - MER65-int LTR ERV1 -491 5772 4136 1479 243 57 81 chr5 8118104 8119528 -191510622 - MER65-int LTR ERV1 -1024 5574 2842 437 275 21 47 chr5 8119577 8119770 -191510380 - MER65-int LTR ERV1 -2866 3732 3545 381 247 50 44 chr5 8120067 8120416 -191509734 - MER65-int LTR ERV1 -1719 3161 2224 279 170 30 156 chr5 8120459 8120594 -191509556 - MER65-int LTR ERV1 -6402 1718 1601 2375 108 0 0 chr5 8120621 8120926 -191509224 + AluSq SINE Alu 1 305 -8 369 0 0 0 chr5 8120926 8120967 -191509183 + (TA)n Simple_repeat Simple_repeat 1 41 0 1556 85 9 9 chr5 8121147 8121371 -191508779 + L1PA10 LINE L1 5944 6167 -1 1245 213 98 90 chr5 8121371 8122186 -191507964 - MER65-int LTR ERV1 -2381 2490 725 872 234 49 16 chr5 8122186 8122430 -191507720 - MER34 LTR ERV1 -257 285 34 2304 98 46 52 chr5 8122928 8123294 -191506856 - THE1B LTR MaLR 0 364 1 1427 232 32 76 chr5 8123558 8124113 -191506037 - MER65B LTR ERV1 0 531 1 990 155 17 11 chr5 8124622 8124796 -191505354 + MER53 DNA DNA 2 176 -13 296 366 77 11 chr5 8126099 8126282 -191503868 + L3 LINE CR1 395 589 -988 479 350 10 10 chr5 8126423 8126617 -191503533 + L3 LINE CR1 655 848 -729 293 311 63 35 chr5 8126858 8127112 -191503038 + L1MEd LINE L1 30 290 -5829 834 225 87 42 chr5 8127900 8128255 -191501895 - MLT1A2 LTR MaLR 0 374 4 657 226 0 7 chr5 8128728 8128874 -191501276 - L1MB3 LINE L1 -3 6180 6036 1156 192 18 1 chr5 8128876 8129110 -191501040 - L1MB3 LINE L1 -211 5972 5734 2649 35 0 0 chr5 8129503 8129815 -191500335 + AluYb8 SINE Alu 6 317 -1 447 296 121 19 chr5 8129815 8130021 -191500129 + L3 LINE CR1 1340 1566 -11 275 318 11 0 chr5 8131228 8131316 -191498834 - MIR SINE MIR -80 182 94 1584 170 58 21 chr5 8131382 8131712 -191498438 + MLT2C2 LTR ERVL 1 342 -122 518 182 71 14 chr5 8131774 8131938 -191498212 + MLT2C2 LTR ERVL 202 414 0 1554 32 0 11 chr5 8132539 8132727 -191497423 + L1PA4 LINE L1 5969 6154 -1 24 0 0 0 chr5 8132767 8132791 -191497359 + AT_rich Low_complexity Low_complexity 1 24 0 917 321 118 0 chr5 8135059 8135408 -191494742 - MLT1J LTR MaLR -121 390 1 1067 105 15 90 chr5 8135446 8135548 -191494602 + MER2 DNA MER2_type 1 82 -263 1671 166 14 3 chr5 8135548 8135837 -191494313 + AluJb SINE Alu 1 292 -20 1067 105 15 90 chr5 8135837 8135934 -191494216 + MER2 DNA MER2_type 82 185 -160 613 193 14 0 chr5 8136661 8136806 -191493344 + CT-rich Low_complexity Low_complexity 3 149 0 2308 85 3 0 chr5 8138431 8138736 -191491414 + AluSp SINE Alu 1 306 -7 2785 150 21 2 chr5 8138787 8139259 -191490891 + MER41B LTR ERV1 155 635 0 505 207 17 9 chr5 8139259 8139375 -191490775 - MLT2C1 LTR ERVL -280 117 1 601 341 41 45 chr5 8139427 8139601 -191490549 - L1MB3 LINE L1 -767 5379 5537 206 61 0 30 chr5 8139601 8139634 -191490516 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 601 341 41 45 chr5 8139634 8139957 -191490193 - L1MB3 LINE L1 -608 5538 5215 427 267 125 46 chr5 8140295 8140535 -191489615 - L1MB3 LINE L1 -1489 4657 4399 2168 102 23 3 chr5 8142463 8142767 -191487383 + AluSx SINE Alu 1 310 -2 1039 231 14 59 chr5 8143128 8143418 -191486732 + MLT2B1 LTR ERVL 1 277 -243 2277 146 32 53 chr5 8143484 8143916 -191486234 + Tigger2a DNA MER2_type 1 423 -11 236 130 0 111 chr5 8143933 8143987 -191486163 + MLT2B1 LTR ERVL 465 512 -8 359 323 93 0 chr5 8144081 8144242 -191485908 + MIR3 SINE MIR 20 195 -13 * 372 319 35 0 chr5 8144240 8144353 -191485797 + L2 LINE L2 3196 3312 -1 1081 124 15 0 chr5 8144365 8144695 -191485455 + (TGGA)n Simple_repeat Simple_repeat 1 336 0 913 285 171 34 chr5 8145853 8146537 -191483613 - L2 LINE L2 0 3313 2499 945 183 18 0 chr5 8146641 8146805 -191483345 - MER20 DNA MER1_type -3 216 50 2170 191 20 54 chr5 8146812 8147194 -191482956 + L1MB5 LINE L1 5696 6059 -115 2223 84 11 0 chr5 8147194 8147481 -191482669 + AluSq SINE Alu 3 292 -21 2170 191 20 54 chr5 8147481 8147594 -191482556 + L1MB5 LINE L1 6059 6174 0 359 224 0 0 chr5 8147619 8147686 -191482464 - MER20 DNA MER1_type -152 67 1 935 226 5 0 chr5 8148986 8149172 -191480978 + MLT1A2 LTR MaLR 1 187 -187 330 26 0 0 chr5 8149205 8149244 -191480906 + (CA)n Simple_repeat Simple_repeat 2 40 0 236 173 173 0 chr5 8149253 8149305 -191480845 + MLT1A2 LTR MaLR 178 238 -127 1218 259 69 16 chr5 8149727 8150159 -191479991 + MLT1C LTR MaLR 13 467 0 238 307 144 20 chr5 8150666 8150868 -191479282 + L2 LINE L2 255 481 -2833 1173 273 39 3 chr5 8150871 8151226 -191478924 - MER87 LTR ERV1 0 541 174 324 269 11 0 chr5 8151456 8151549 -191478601 + MER5A DNA MER1_type 13 106 -83 481 254 294 13 chr5 8151669 8152037 -191478113 + L2 LINE L2 1103 1581 -1733 1902 92 0 32 chr5 8152037 8152318 -191477832 - AluSx SINE Alu -7 305 34 2416 106 25 17 chr5 8153375 8153733 -191476417 + THE1C LTR MaLR 13 373 -2 233 320 124 0 chr5 8154300 8154397 -191475753 - MIR3 SINE MIR -94 114 6 489 75 118 11 chr5 8154817 8154910 -191475240 - L1MB8 LINE L1 -35 6143 6041 1032 254 42 37 chr5 8155028 8155084 -191475066 - L1MEc LINE L1 -2978 3237 3183 2003 126 0 10 chr5 8155084 8155394 -191474756 - AluSg SINE Alu -3 307 1 1032 254 42 37 chr5 8155394 8155531 -191474619 - L1MEc LINE L1 -3032 3183 3048 2193 124 52 22 chr5 8155531 8155895 -191474255 - THE1C LTR MaLR 0 375 1 1032 254 42 37 chr5 8155895 8156503 -191473647 - L1MEc LINE L1 -3167 3048 2445 1657 165 3 3 chr5 8156503 8156794 -191473356 + AluJb SINE Alu 19 309 -3 330 67 0 0 chr5 8156794 8156839 -191473311 + (TA)n Simple_repeat Simple_repeat 1 45 0 1032 254 42 37 chr5 8156839 8157148 -191473002 - L1MEc LINE L1 -3769 2446 2120 344 320 67 44 chr5 8157426 8158083 -191472067 + L1M4 LINE L1 3764 4435 -1711 420 300 90 45 chr5 8158265 8158549 -191471601 - L1ME4a LINE L1 -149 5972 5673 2423 126 8 13 chr5 8158578 8158952 -191471198 - L1PB3 LINE L1 -1 6153 5782 192 96 0 58 chr5 8158958 8159010 -191471140 + (TA)n Simple_repeat Simple_repeat 1 49 0 5379 177 22 4 chr5 8159010 8160659 -191469491 - L1PB3 LINE L1 -359 5795 4118 1669 170 20 20 chr5 8161114 8161420 -191468730 - AluJo SINE Alu -6 306 1 1518 158 82 7 chr5 8162509 8162788 -191467362 - AluJb SINE Alu -12 300 1 267 340 19 0 chr5 8163696 8163799 -191466351 - L2 LINE L2 -1 3312 3208 320 262 155 56 chr5 8165100 8165352 -191464798 + MLT1I LTR MaLR 110 386 -23 256 59 118 0 chr5 8165518 8165569 -191464581 + CT-rich Low_complexity Low_complexity 1 57 0 * 286 176 24 24 chr5 8165562 8165647 -191464503 + C-rich Low_complexity Low_complexity 3 87 0 1126 176 14 23 chr5 8165651 8165872 -191464278 - AluJo SINE Alu -24 288 70 231 108 0 0 chr5 8165898 8165924 -191464226 + (A)n Simple_repeat Simple_repeat 1 29 -8 2217 95 3 13 chr5 8165924 8166239 -191463911 + AluSx SINE Alu 1 312 0 231 108 0 0 chr5 8166239 8166249 -191463901 + (A)n Simple_repeat Simple_repeat 28 37 0 246 301 173 39 chr5 8167332 8167894 -191462256 + L2 LINE L2 2127 2763 -551 410 260 39 10 chr5 8168471 8168575 -191461575 - MIR SINE MIR -139 123 17 1256 245 29 56 chr5 8169299 8169756 -191460394 + MLT1J2 LTR MaLR 1 395 -14 388 247 0 0 chr5 8170327 8170408 -191459742 - MER20 DNA MER1_type -134 85 5 348 163 168 0 chr5 8170525 8170605 -191459545 + MLT1C LTR MaLR 8 99 -295 338 277 149 76 chr5 8170803 8171132 -191459018 + MLT1J LTR MaLR 109 461 -50 740 223 40 55 chr5 8171206 8171408 -191458742 + MLT1C LTR MaLR 53 251 -216 * 1063 220 160 60 chr5 8171407 8171876 -191458274 + MLT1H LTR MaLR 26 541 -8 316 326 67 17 chr5 8171940 8172118 -191458032 - MER5A DNA MER1_type -1 188 2 1910 142 0 0 chr5 8172337 8172619 -191457531 + AluSx SINE Alu 1 282 -30 230 116 0 0 chr5 8172656 8172699 -191457451 - LTR66 LTR ERVL -171 439 397 231 255 128 60 chr5 8172952 8173101 -191457049 - L2 LINE L2 -3 3310 3152 1570 166 53 111 chr5 8173101 8173589 -191456561 + MLT1C LTR MaLR 4 463 -4 924 256 130 38 chr5 8173626 8173923 -191456227 - L2 LINE L2 -238 3034 2766 2553 106 16 5 chr5 8173923 8174291 -191455859 - L1PA10 LINE L1 -2 6166 5795 924 256 130 38 chr5 8174291 8174566 -191455584 - L2 LINE L2 -506 2766 2418 21 57 0 0 chr5 8175723 8175758 -191454392 + GC_rich Low_complexity Low_complexity 1 35 0 225 65 0 0 chr5 8176000 8176031 -191454119 + (CCCCCG)n Simple_repeat Simple_repeat 3 33 0 198 0 0 0 chr5 8176099 8176121 -191454029 + (CCG)n Simple_repeat Simple_repeat 3 24 0 25 51 0 0 chr5 8176203 8176242 -191453908 + GC_rich Low_complexity Low_complexity 1 39 0 214 209 7 61 chr5 8176277 8176425 -191453725 + (CCG)n Simple_repeat Simple_repeat 1 140 0 249 33 0 0 chr5 8176473 8176503 -191453647 + (CCG)n Simple_repeat Simple_repeat 1 30 0 70 24 0 0 chr5 8176527 8176611 -191453539 + GC_rich Low_complexity Low_complexity 1 84 0 203 196 36 0 chr5 8176747 8176803 -191453347 + (CGG)n Simple_repeat Simple_repeat 1 58 0 220 125 97 28 chr5 8176807 8176879 -191453271 + (CCGCG)n Simple_repeat Simple_repeat 3 79 0 21 36 0 0 chr5 8176889 8176917 -191453233 + GC_rich Low_complexity Low_complexity 1 28 0 189 154 0 0 chr5 8176925 8176964 -191453186 + (TCG)n Simple_repeat Simple_repeat 2 40 0 300 290 113 46 chr5 8177218 8177501 -191452649 + L1MCa LINE L1 1994 2295 -4131 22 35 0 0 chr5 8177501 8177530 -191452620 + AT_rich Low_complexity Low_complexity 1 29 0 2642 172 186 122 chr5 8177532 8178073 -191452077 - L1MC3 LINE L1 -19 7766 7261 275 279 48 19 chr5 8178073 8178177 -191451973 - MLT1F1 LTR MaLR -426 141 35 2642 172 186 122 chr5 8178177 8178233 -191451917 - L1MC3 LINE L1 -524 7261 7210 225 65 0 0 chr5 8178233 8178264 -191451886 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2642 172 186 122 chr5 8178264 8178552 -191451598 - L1MC3 LINE L1 -575 7210 6714 24 32 0 0 chr5 8178604 8178635 -191451515 + AT_rich Low_complexity Low_complexity 1 31 0 1927 132 3 3 chr5 8178673 8178976 -191451174 - AluSx SINE Alu -9 303 1 323 295 76 78 chr5 8178997 8179389 -191450761 - L1MEc LINE L1 -2690 3525 3028 29 28 0 0 chr5 8179506 8179542 -191450608 + AT_rich Low_complexity Low_complexity 1 36 0 301 345 31 31 chr5 8179704 8180009 -191450141 - L1MEc LINE L1 -3643 2572 2285 2048 88 7 14 chr5 8180050 8180346 -191449804 + AluSq SINE Alu 1 294 -19 219 186 0 0 chr5 8180390 8180433 -191449717 + CT-rich Low_complexity Low_complexity 3 45 0 510 241 73 55 chr5 8180473 8180693 -191449457 + LTR67 LTR ERVL 68 291 -266 1059 263 89 9 chr5 8181255 8181593 -191448557 + MLT1A1 LTR MaLR 1 365 0 1334 189 164 44 chr5 8182065 8182498 -191447652 - MLT1D LTR MaLR -20 485 1 1237 102 10 56 chr5 8182573 8182770 -191447380 - THE1B LTR MaLR 0 364 177 2088 112 137 3 chr5 8182772 8183094 -191447056 - MLT2A2 LTR ERVL -88 365 1 1779 214 59 0 chr5 8183357 8183763 -191446387 - L1MD3 LINE L1 -19 7976 7547 21 0 0 0 chr5 8184363 8184384 -191445766 + AT_rich Low_complexity Low_complexity 1 21 0 182 315 45 36 chr5 8184577 8184688 -191445462 + L2 LINE L2 1437 1548 -1766 515 260 0 7 chr5 8186260 8186563 -191443587 + (CA)n Simple_repeat Simple_repeat 1 300 0 1108 246 83 77 chr5 8186878 8187374 -191442776 + MLT1F1 LTR MaLR 68 566 -1 1286 147 7 8 chr5 8187685 8187906 -191442244 - MLT2B3 LTR ERVL -195 219 1 1580 233 37 22 chr5 8187910 8188369 -191441781 - MLT1C LTR MaLR -1 466 1 433 296 103 29 chr5 8190471 8190714 -191439436 + L1MC4a LINE L1 5135 5395 -751 572 246 315 11 chr5 8190714 8191092 -191439058 + L2 LINE L2 2417 2909 -405 227 182 23 0 chr5 8191095 8191139 -191439011 + MLT1G LTR MaLR 1 45 -550 2007 183 39 9 chr5 8191140 8191517 -191438633 + MLT2D LTR ERVL 1 480 -40 243 0 0 0 chr5 8191531 8191558 -191438592 + (TG)n Simple_repeat Simple_repeat 2 28 0 1306 204 31 40 chr5 8191698 8192048 -191438102 + MLT1G LTR MaLR 161 571 0 757 272 71 58 chr5 8192096 8192475 -191437675 + L2 LINE L2 2926 3309 -4 1104 287 30 38 chr5 8192502 8193028 -191437122 + L1MC4a LINE L1 5407 5928 -1880 1283 229 93 41 chr5 8194329 8194769 -191435381 + MLT1C LTR MaLR 1 463 -4 231 214 89 0 chr5 8194802 8194858 -191435292 + L2 LINE L2 3210 3270 -2 415 304 91 32 chr5 8196539 8196759 -191433391 + MIR SINE MIR 16 248 -14 21 36 0 0 chr5 8196970 8196998 -191433152 + AT_rich Low_complexity Low_complexity 1 28 0 1825 105 66 21 chr5 8197876 8198162 -191431988 - AluSq SINE Alu -13 300 2 1615 173 24 64 chr5 8198383 8198758 -191431392 + MLT1A1 LTR MaLR 1 360 -5 2350 61 3 3 chr5 8198941 8199237 -191430913 + AluY SINE Alu 1 296 -15 1178 232 95 34 chr5 8199545 8199797 -191430353 - MLT1C LTR MaLR 0 467 183 2108 109 0 0 chr5 8199797 8200090 -191430060 - AluSc SINE Alu -16 293 1 1178 232 95 34 chr5 8200090 8200217 -191429933 - MLT1C LTR MaLR -284 183 65 2328 102 50 44 chr5 8200355 8200566 -191429584 - THE1B LTR MaLR 0 364 148 1913 114 4 4 chr5 8200566 8200876 -191429274 + AluSc SINE Alu 1 310 0 2328 102 50 44 chr5 8200876 8201025 -191429125 - THE1B LTR MaLR -216 148 1 309 217 98 22 chr5 8201758 8201850 -191428300 - MLT1D LTR MaLR -356 149 51 308 285 156 38 chr5 8203060 8203246 -191426904 + MIR SINE MIR 31 238 -24 232 299 244 17 chr5 8203245 8203593 -191426557 + L2 LINE L2 2887 3313 0 * 629 201 98 24 chr5 8205339 8205503 -191424647 - MER45A DNA AcHobo 0 178 3 5419 106 24 20 chr5 8205795 8205828 -191424322 + L1PA16 LINE L1 5332 5363 -803 1175 59 0 182 chr5 8205828 8206064 -191424086 + 7SK RNA RNA 1 193 0 5419 106 24 20 chr5 8206064 8206861 -191423289 + L1PA16 LINE L1 5363 6165 -1 2137 100 0 10 chr5 8207552 8207861 -191422289 + AluSg SINE Alu 2 307 -3 297 215 88 73 chr5 8207862 8208067 -191422083 + L1MC/D LINE L1 3115 3322 -2824 2592 242 46 31 chr5 8208071 8209029 -191421121 + L1MC/D LINE L1 3575 4546 -1600 836 97 0 0 chr5 8209034 8209147 -191421003 - AluSq SINE Alu -48 265 153 599 256 6 0 chr5 8209154 8209310 -191420840 + L1MC/D LINE L1 4563 4719 -1427 360 0 0 0 chr5 8209377 8209417 -191420733 + (TG)n Simple_repeat Simple_repeat 1 40 0 821 166 7 0 chr5 8209420 8209559 -191420591 - FLAM_C SINE Alu -3 140 1 363 277 103 79 chr5 8209587 8209879 -191420271 - L1MEc LINE L1 -4091 2305 2007 25 0 0 0 chr5 8210340 8210365 -191419785 + AT_rich Low_complexity Low_complexity 1 25 0 1681 127 67 0 chr5 8210465 8210732 -191419418 - AluSq SINE Alu -28 285 1 232 215 83 42 chr5 8211075 8211219 -191418931 + L1MC/D LINE L1 5189 5338 -808 374 341 150 30 chr5 8211221 8211488 -191418662 + L1MC/D LINE L1 5525 5823 -1985 853 85 0 0 chr5 8211514 8211632 -191418518 - AluY SINE Alu -21 290 173 387 0 0 0 chr5 8211688 8211731 -191418419 + (CA)n Simple_repeat Simple_repeat 2 44 0 2536 186 35 2 chr5 8211750 8212239 -191417911 - MLT1D LTR MaLR 0 505 1 180 0 0 0 chr5 8212314 8212334 -191417816 + (TC)n Simple_repeat Simple_repeat 1 20 0 21 104 0 0 chr5 8212348 8212425 -191417725 + AT_rich Low_complexity Low_complexity 1 77 0 456 294 0 27 chr5 8212540 8212724 -191417426 + (TG)n Simple_repeat Simple_repeat 2 180 0 241 156 0 0 chr5 8214966 8215011 -191415139 + L2 LINE L2 3018 3062 -210 1668 71 0 0 chr5 8215549 8215760 -191414390 - AluSg/x SINE Alu -25 285 75 1965 131 103 25 chr5 8215887 8216254 -191413896 + MLT2C1 LTR ERVL 2 397 0 710 98 46 12 chr5 8218318 8218491 -191411659 + (CA)n Simple_repeat Simple_repeat 2 180 0 256 191 35 9 chr5 8218515 8218630 -191411520 + (CA)n Simple_repeat Simple_repeat 2 119 0 1487 190 65 50 chr5 8218636 8219020 -191411130 + MLT1B LTR MaLR 1 390 0 1913 289 52 72 chr5 8219029 8220004 -191410146 - ERVL LTR ERVL -2955 2809 1854 398 292 39 8 chr5 8220034 8220164 -191409986 + L2 LINE L2 3138 3271 -1 1280 215 134 6 chr5 8220788 8221123 -191409027 - L1MD3 LINE L1 -13 7982 7605 1386 222 57 40 chr5 8221493 8221863 -191408287 - MLT2B3 LTR ERVL -4 550 175 313 259 65 0 chr5 8221869 8221977 -191408173 - MLT1J2 LTR MaLR -313 137 23 180 240 87 87 chr5 8222854 8222958 -191407192 + L2 LINE L2 2729 2832 -482 614 241 143 52 chr5 8223276 8223636 -191406514 - MLT1J2 LTR MaLR -1 445 41 1180 275 142 53 chr5 8223724 8224345 -191405805 - MER50 LTR ERV1 -58 676 1 257 262 71 24 chr5 8225357 8225441 -191404709 + MER91B DNA MER1_type 44 131 -59 292 321 12 0 chr5 8225454 8225538 -191404612 + MER91B DNA MER1_type 93 177 -13 4237 129 41 124 chr5 8225944 8226988 -191403162 - L1MC2 LINE L1 -11 6333 5377 2067 108 3 0 chr5 8227735 8228042 -191402108 + AluSx SINE Alu 1 312 0 208 358 42 0 chr5 8228186 8228281 -191401869 + L3 LINE CR1 1459 1557 -20 1870 136 3 3 chr5 8228472 8228766 -191401384 - L1PB1 LINE L1 -1 6150 5857 3957 118 21 4 chr5 8228766 8229491 -191400659 + L1PB1 LINE L1 5117 5853 -298 320 309 73 0 chr5 8229655 8229765 -191400385 + L2 LINE L2 3155 3272 0 224 319 43 76 chr5 8232601 8232786 -191397364 + L3 LINE CR1 597 775 -802 30 45 0 0 chr5 8233632 8233676 -191396474 + AT_rich Low_complexity Low_complexity 1 44 0 2311 61 7 3 chr5 8233864 8234158 -191395992 + AluY SINE Alu 1 295 -16 826 235 90 45 chr5 8234932 8235315 -191394835 - MLT1C LTR MaLR -1 466 12 1755 167 0 3 chr5 8235607 8235900 -191394250 + AluJb SINE Alu 1 292 -20 263 250 114 0 chr5 8236348 8236426 -191393724 + MIR3 SINE MIR 110 200 -8 2245 104 0 0 chr5 8236426 8236735 -191393415 - AluSx SINE Alu -3 309 1 239 282 220 22 chr5 8238186 8238459 -191391691 - L2 LINE L2 -342 2972 2646 2222 110 0 0 chr5 8238480 8238790 -191391360 + AluSx SINE Alu 1 310 -2 852 152 0 0 chr5 8238926 8239058 -191391092 - AluSq/x SINE Alu -181 132 1 1695 147 109 32 chr5 8239225 8239573 -191390577 + THE1C LTR MaLR 1 375 0 300 354 31 36 chr5 8240679 8240871 -191389279 - HAL1b LINE L1 -1052 296 106 2478 44 0 0 chr5 8240904 8241199 -191388951 + AluY SINE Alu 1 295 -16 1733 129 42 18 chr5 8241201 8241487 -191388663 - AluJo SINE Alu -19 293 1 431 133 0 0 chr5 8241579 8241639 -191388511 + 5S rRNA rRNA 31 90 -31 2044 135 0 0 chr5 8241971 8242274 -191387876 - AluSx SINE Alu -9 303 1 403 314 128 33 chr5 8243259 8243680 -191386470 - L1MEd LINE L1 -5198 921 461 240 345 73 0 chr5 8243683 8243848 -191386302 - L1MEd LINE L1 -5939 180 4 1696 151 4 0 chr5 8245583 8245848 -191384302 + AluSx SINE Alu 1 266 -46 246 32 0 0 chr5 8245862 8245893 -191384257 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1981 120 7 14 chr5 8245967 8246259 -191383891 + AluSx SINE Alu 2 291 -21 1854 135 10 13 chr5 8247427 8247731 -191382419 - AluJb SINE Alu -9 303 1 1403 187 73 0 chr5 8248652 8248804 -191381346 - AluJo SINE Alu -19 293 154 207 0 0 0 chr5 8248804 8248827 -191381323 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1403 187 73 0 chr5 8248827 8248947 -191381203 - AluJo SINE Alu -158 154 1 407 232 21 0 chr5 8249258 8249353 -191380797 - MIR SINE MIR -98 164 68 849 40 0 151 chr5 8249447 8249745 -191380405 + L1PA3 LINE L1 5891 6143 -12 1199 40 14 0 chr5 8249858 8250006 -191380144 + L1PA2 LINE L1 6006 6155 0 251 216 0 0 chr5 8250164 8250215 -191379935 + L1M4 LINE L1 3294 3344 -2802 1417 133 12 40 chr5 8250221 8250469 -191379681 - AluJo SINE Alu -14 298 58 529 245 7 19 chr5 8250475 8250630 -191379520 + L1M4 LINE L1 3337 3489 -2657 20552 123 35 27 chr5 8250758 8254232 -191375918 + L1P LINE L1 12 3513 -2633 4503 74 0 0 chr5 8254232 8254798 -191375352 + L1PA7 LINE L1 5586 6152 -2 572 255 11 75 chr5 8254859 8254989 -191375161 + L1ME1 LINE L1 5986 6102 -64 2319 70 3 0 chr5 8254989 8255287 -191374863 - AluSp SINE Alu -14 299 1 572 255 11 75 chr5 8255287 8255344 -191374806 + L1ME1 LINE L1 6102 6161 -5 5081 203 83 11 chr5 8256674 8257055 -191373095 + Cheshire DNA MER1_type 532 884 -1536 1618 171 51 3 chr5 8257055 8257347 -191372803 + AluJb SINE Alu 1 306 -6 5081 203 83 11 chr5 8257347 8258696 -191371454 + Cheshire DNA MER1_type 884 2415 -5 669 134 79 31 chr5 8259990 8260117 -191370033 + FLAM_C SINE Alu 1 133 0 213 290 197 2 chr5 8260412 8260534 -191369616 - MIR SINE MIR -62 146 9 320 250 138 20 chr5 8260652 8260848 -191369302 + L1ME4a LINE L1 5881 6099 -22 973 219 90 68 chr5 8262008 8262328 -191367822 + MER93b LTR ERV1 1 331 -42 1612 124 98 0 chr5 8262328 8262593 -191367557 - AluSq SINE Alu -22 291 1 973 219 90 68 chr5 8262593 8262637 -191367513 + MER93b LTR ERV1 331 373 0 216 198 77 121 chr5 8263833 8263924 -191366226 + L2 LINE L2 3186 3272 0 294 344 118 24 chr5 8265015 8265227 -191364923 - MIR SINE MIR -16 246 15 244 204 0 0 chr5 8265658 8265702 -191364448 - MIR SINE MIR -147 115 72 208 85 0 85 chr5 8266267 8266314 -191363836 + (TTTTTA)n Simple_repeat Simple_repeat 6 48 0 1087 111 0 0 chr5 8266322 8266475 -191363675 - AluSg/x SINE Alu -26 286 134 2115 68 4 4 chr5 8269535 8269840 -191360310 - AluY SINE Alu 0 305 1 1391 129 0 0 chr5 8270137 8270346 -191359804 + AluSg/x SINE Alu 91 299 -13 1541 173 80 26 chr5 8270636 8270988 -191359162 - THE1C LTR MaLR 0 375 5 1858 147 0 7 chr5 8271599 8271892 -191358258 - AluJb SINE Alu -21 291 1 1678 167 17 0 chr5 8272300 8272587 -191357563 - AluSq SINE Alu -21 292 1 309 130 0 0 chr5 8272897 8272943 -191357207 - FLAM SINE Alu -7 126 81 1516 152 110 15 chr5 8274008 8274272 -191355878 + AluSx SINE Alu 5 293 -19 31 0 0 0 chr5 8274304 8274335 -191355815 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 8274515 8274544 -191355606 + AT_rich Low_complexity Low_complexity 1 29 0 300 316 137 16 chr5 8276375 8276565 -191353585 + L3 LINE CR1 626 838 -739 201 74 0 0 chr5 8277590 8277617 -191352533 + (T)n Simple_repeat Simple_repeat 1 27 0 542 255 30 81 chr5 8277725 8277781 -191352369 - MIR SINE MIR 0 262 205 2466 88 3 0 chr5 8277781 8278089 -191352061 - AluSp SINE Alu -4 309 1 542 255 30 81 chr5 8278089 8278267 -191351883 - MIR SINE MIR -57 205 40 2567 57 0 0 chr5 8278889 8279188 -191350962 - AluY SINE Alu -12 299 1 258 32 0 0 chr5 8279282 8279313 -191350837 + (TTA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr5 8283593 8283623 -191346527 + AT_rich Low_complexity Low_complexity 1 30 0 3331 203 20 16 chr5 8283982 8284716 -191345434 - L1MB3 LINE L1 -10 6173 5437 2450 81 10 0 chr5 8286598 8286906 -191343244 - AluSx SINE Alu -1 311 1 899 248 22 47 chr5 8288554 8288876 -191341274 - L1MB7 LINE L1 -10 6174 5861 22 0 0 0 chr5 8289255 8289277 -191340873 + AT_rich Low_complexity Low_complexity 1 22 0 2197 99 27 10 chr5 8290020 8290314 -191339836 - AluSx SINE Alu -13 299 1 1750 160 0 45 chr5 8290343 8290655 -191339495 + AluJb SINE Alu 1 298 -14 180 346 39 0 chr5 8292591 8292669 -191337481 + MIR SINE MIR 59 139 -123 2559 43 0 7 chr5 8294136 8294437 -191335713 + AluY SINE Alu 1 299 -12 1869 132 11 0 chr5 8294755 8295020 -191335130 + AluSg SINE Alu 28 295 -15 2545 69 3 0 chr5 8297007 8297311 -191332839 - AluY SINE Alu -6 305 1 203 342 37 19 chr5 8298711 8298872 -191331278 - MIR SINE MIR -41 221 58 23 0 0 0 chr5 8301161 8301184 -191328966 + AT_rich Low_complexity Low_complexity 1 23 0 1922 269 124 21 chr5 8301724 8302680 -191327470 - L1MC4 LINE L1 -52 7990 6936 559 282 108 35 chr5 8302770 8303142 -191327008 + HAL1 LINE L1 578 976 -1531 1573 202 136 0 chr5 8303920 8304287 -191325863 - MER47B DNA MER2_type 0 418 2 306 217 79 21 chr5 8304595 8304746 -191325404 + MLT1F LTR MaLR 24 189 -378 2337 204 78 2 chr5 8304762 8305276 -191324874 - MER68 LTR ERV1 0 562 10 429 226 0 39 chr5 8305318 8305420 -191324730 + MLT1F LTR MaLR 314 411 -182 2375 128 0 0 chr5 8305470 8305805 -191324345 - THE1B LTR MaLR 0 364 30 4746 131 69 55 chr5 8305824 8306710 -191323440 - MER49 LTR ERV1 -25 898 1 618 194 45 8 chr5 8306710 8306843 -191323307 + MLT1F LTR MaLR 405 542 0 524 230 11 79 chr5 8306843 8306982 -191323168 + MIR SINE MIR 69 195 -67 4283 71 54 2 chr5 8306982 8307560 -191322590 + LTR14B LTR ERVK 1 608 0 524 230 11 79 chr5 8307560 8307598 -191322552 + MIR SINE MIR 195 234 -28 710 223 127 75 chr5 8308473 8308819 -191321331 - LTR16A LTR ERVL -2 448 85 2514 55 0 23 chr5 8309009 8309319 -191320831 + AluY SINE Alu 1 303 -8 476 316 97 72 chr5 8310407 8310456 -191319694 - L1M4 LINE L1 -2970 3176 3130 2511 64 3 0 chr5 8310456 8310754 -191319396 + AluY SINE Alu 1 299 -12 476 316 97 72 chr5 8310754 8311612 -191318538 - L1M4 LINE L1 -3016 3130 2239 1372 197 100 4 chr5 8311612 8311881 -191318269 - AluJo SINE Alu -17 295 1 476 316 97 72 chr5 8311881 8311964 -191318186 - L1M4 LINE L1 -3907 2239 2160 737 267 45 25 chr5 8313248 8313696 -191316454 + MER76 LTR ERV 1 521 -167 835 233 59 81 chr5 8314099 8314490 -191315660 + MLT1G3 LTR MaLR 172 549 0 4750 184 26 42 chr5 8315899 8316024 -191314126 + L1MB1 LINE L1 4130 4255 -1913 180 0 0 0 chr5 8316024 8316044 -191314106 + (CA)n Simple_repeat Simple_repeat 1 20 0 4750 184 26 42 chr5 8316044 8316233 -191313917 + L1MB1 LINE L1 4255 4446 -1722 2520 69 0 0 chr5 8316233 8316536 -191313614 + AluY SINE Alu 1 303 -8 4750 184 26 42 chr5 8316536 8317133 -191313017 + L1MB1 LINE L1 4446 5051 -1117 1100 95 0 0 chr5 8317133 8317270 -191312880 + AluSc SINE Alu 128 264 -45 4750 184 26 42 chr5 8317270 8318188 -191311962 + L1MB1 LINE L1 5051 5965 -203 2425 126 81 0 chr5 8318188 8318584 -191311566 + MSTC LTR MaLR 1 428 0 4750 184 26 42 chr5 8318584 8318780 -191311370 + L1MB1 LINE L1 5965 6163 -5 1484 259 72 16 chr5 8318778 8319415 -191310735 - L1ME3A LINE L1 -231 5939 5267 * 981 257 55 23 chr5 8319645 8320042 -191310108 - L1ME LINE L1 -499 5671 5262 865 302 107 36 chr5 8320128 8320868 -191309282 - L1ME LINE L1 -1053 5093 4407 2281 96 10 0 chr5 8320868 8321160 -191308990 - AluY SINE Alu -16 295 1 865 302 107 36 chr5 8321160 8321763 -191308387 - L1ME LINE L1 -1739 4407 3613 455 225 47 30 chr5 8321920 8322089 -191308061 + MER5B DNA MER1_type 1 172 -6 1335 107 202 0 chr5 8322500 8322805 -191307345 + L1MA7 LINE L1 5936 6291 0 224 254 45 0 chr5 8323206 8323273 -191306877 + MIR SINE MIR 89 158 -104 1733 182 26 47 chr5 8323497 8323849 -191306301 + L1MB3 LINE L1 5788 6133 -50 2133 109 0 45 chr5 8323849 8324160 -191305990 + AluSx SINE Alu 3 299 -13 1733 182 26 47 chr5 8324160 8324192 -191305958 + L1MB3 LINE L1 6133 6164 -19 198 0 0 0 chr5 8324192 8324214 -191305936 + (TG)n Simple_repeat Simple_repeat 2 23 0 * 288 0 0 0 chr5 8324213 8324245 -191305905 + (TA)n Simple_repeat Simple_repeat 1 32 0 672 254 122 61 chr5 8324273 8324778 -191305372 - MLT1E2 LTR MaLR -52 574 1 403 229 221 0 chr5 8325230 8325370 -191304780 + MER5B DNA MER1_type 7 177 -1 232 279 35 35 chr5 8325580 8325666 -191304484 - L2 LINE L2 -51 3221 3136 243 0 0 0 chr5 8325882 8325909 -191304241 + (TG)n Simple_repeat Simple_repeat 1 27 0 369 252 0 27 chr5 8325928 8326039 -191304111 + L1MC5 LINE L1 7806 7913 -48 2935 78 5 5 chr5 8326098 8326496 -191303654 + MLT2A1 LTR ERVL 3 400 -44 181 160 20 20 chr5 8326569 8326619 -191303531 + (TA)n Simple_repeat Simple_repeat 2 51 0 377 68 14 7 chr5 8326637 8326709 -191303441 + MLT2A2 LTR ERVL 400 453 0 21 57 0 0 chr5 8326715 8326750 -191303400 + AT_rich Low_complexity Low_complexity 1 35 0 429 110 37 0 chr5 8327444 8327526 -191302624 + GA-rich Low_complexity Low_complexity 4 88 0 349 266 65 16 chr5 8327668 8327792 -191302358 - L1 LINE L1 -2945 3201 3072 242 194 28 28 chr5 8327852 8327924 -191302226 + (CCCCG)n Simple_repeat Simple_repeat 5 76 0 21 36 0 0 chr5 8327934 8327962 -191302188 + GC_rich Low_complexity Low_complexity 1 28 0 180 158 0 0 chr5 8327970 8328008 -191302142 + (TCG)n Simple_repeat Simple_repeat 2 39 0 31 0 0 0 chr5 8328071 8328102 -191302048 + GC_rich Low_complexity Low_complexity 1 31 0 31 0 0 0 chr5 8328155 8328186 -191301964 + GC_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 8328297 8328333 -191301817 + GC_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr5 8328380 8328414 -191301736 + GC_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 8328807 8328837 -191301313 + AT_rich Low_complexity Low_complexity 1 30 0 1327 226 68 43 chr5 8333461 8333984 -191296166 - MLT1E3 LTR MaLR 0 624 18 859 97 0 0 chr5 8334237 8334397 -191295753 + AluSc SINE Alu 168 327 0 198 0 0 0 chr5 8336222 8336244 -191293906 + (T)n Simple_repeat Simple_repeat 1 22 0 909 159 53 0 chr5 8336520 8336690 -191293460 + MER3 DNA MER1_type 1 179 -30 266 326 47 29 chr5 8337064 8337236 -191292914 - MIR SINE MIR -17 245 71 180 286 57 14 chr5 8337756 8337826 -191292324 - MIR SINE MIR -118 144 72 349 296 11 0 chr5 8338570 8338658 -191291492 - MIR SINE MIR -161 101 13 2371 104 0 0 chr5 8338716 8339023 -191291127 + AluY SINE Alu 1 307 -4 268 330 11 11 chr5 8339795 8339889 -191290261 - MIR SINE MIR -4 258 165 207 308 49 56 chr5 8341227 8341370 -191288780 + L2 LINE L2 2921 3062 -251 286 259 12 35 chr5 8341964 8342049 -191288101 - MER117 DNA MER1_type -60 137 55 260 109 18 18 chr5 8342501 8342556 -191287594 - L1ME4a LINE L1 -10 6111 6057 259 288 27 45 chr5 8342873 8342984 -191287166 + MIR SINE MIR 82 190 -72 180 0 0 0 chr5 8344431 8344451 -191285699 + (A)n Simple_repeat Simple_repeat 1 20 0 848 186 12 12 chr5 8345219 8345380 -191284770 - FRAM SINE Alu -5 161 1 196 314 14 43 chr5 8347734 8347804 -191282346 - L2 LINE L2 -10 3303 3236 2243 115 0 16 chr5 8349424 8349737 -191280413 - AluSc SINE Alu -1 308 1 470 281 22 14 chr5 8354502 8354641 -191275509 - MIR SINE MIR -35 227 88 207 250 42 94 chr5 8357156 8357252 -191272898 + MER5A DNA MER1_type 92 182 -7 427 246 108 0 chr5 8359073 8359240 -191270910 + MER3 DNA MER1_type 3 187 -22 207 292 31 62 chr5 8360889 8360985 -191269165 - L2 LINE L2 -1 3271 3179 1506 168 70 16 chr5 8363573 8363942 -191266208 - Charlie5 DNA MER1_type 0 2624 2236 26 50 0 0 chr5 8364540 8364580 -191265570 + AT_rich Low_complexity Low_complexity 1 40 0 2138 145 0 3 chr5 8367932 8368235 -191261915 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 8370426 8370450 -191259700 + AT_rich Low_complexity Low_complexity 1 24 0 1296 138 0 0 chr5 8371009 8371190 -191258960 + AluSg/x SINE Alu 120 300 -12 2095 113 3 0 chr5 8371470 8371772 -191258378 - AluSx SINE Alu 0 303 1 239 306 74 19 chr5 8373585 8373693 -191256457 - MIR3 SINE MIR -14 194 81 363 221 102 31 chr5 8374459 8374586 -191255564 + MIR SINE MIR 27 162 -46 233 245 0 0 chr5 8374933 8374982 -191255168 + MLT1L LTR MaLR 4 52 -563 525 133 37 3 chr5 8374985 8375121 -191255029 + MER53 DNA DNA 1 184 -5 420 306 137 32 chr5 8375247 8375495 -191254655 + MLT1J LTR MaLR 238 511 0 543 259 57 31 chr5 8376235 8376428 -191253722 - MER5C DNA MER1_type -3 321 124 224 293 60 26 chr5 8376750 8376866 -191253284 - MER5B DNA MER1_type -58 120 1 21 0 0 0 chr5 8377021 8377042 -191253108 + AT_rich Low_complexity Low_complexity 1 21 0 499 312 97 33 chr5 8378783 8378821 -191251329 - L1MC4a LINE L1 -1842 5966 5932 2050 141 10 0 chr5 8378821 8379112 -191251038 - AluSx SINE Alu -18 294 1 499 312 97 33 chr5 8379112 8379435 -191250715 - L1MC4a LINE L1 -1876 5932 5582 469 314 74 95 chr5 8379507 8381382 -191248768 + L1M4 LINE L1 2363 3782 -2364 255 252 16 32 chr5 8381561 8381684 -191248466 + L1M4 LINE L1 3928 4048 -2098 861 136 17 0 chr5 8381723 8381841 -191248309 - AluSq/x SINE Alu -193 120 1 287 265 92 41 chr5 8382029 8382225 -191247925 + L1M4 LINE L1 5176 5381 -765 287 176 305 53 chr5 8382854 8382985 -191247165 + L2 LINE L2 3147 3310 -3 1217 215 168 22 chr5 8384515 8384919 -191245231 - MLT1C LTR MaLR 0 467 5 207 224 41 0 chr5 8385555 8385604 -191244546 + CT-rich Low_complexity Low_complexity 3 53 0 22 35 0 0 chr5 8386698 8386727 -191243423 + GC_rich Low_complexity Low_complexity 1 29 0 222 281 116 33 chr5 8388106 8388227 -191241923 + MIR3 SINE MIR 74 204 -4 1648 191 158 47 chr5 8388236 8388421 -191241729 + LTR44 LTR ERV1 1 164 -355 715 224 18 12 chr5 8388421 8388586 -191241564 - FRAM SINE Alu 0 166 1 1648 191 158 47 chr5 8388586 8388867 -191241283 + LTR44 LTR ERV1 164 519 0 325 316 123 7 chr5 8389153 8389308 -191240842 + L1MC4a LINE L1 5265 5437 -727 711 303 100 20 chr5 8389333 8389683 -191240467 + L1MC4a LINE L1 5517 5894 -1914 2046 141 33 33 chr5 8390282 8390644 -191239506 + THE1B LTR MaLR 3 364 0 1066 188 0 11 chr5 8392418 8392604 -191237546 - AluJb SINE Alu -10 302 119 1726 191 13 34 chr5 8392608 8392978 -191237172 + MLT2C1 LTR ERVL 9 534 -20 190 0 67 0 chr5 8393097 8393127 -191237023 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2583 65 10 0 chr5 8393866 8394174 -191235976 - AluY SINE Alu 0 311 1 2406 97 0 3 chr5 8394176 8394476 -191235674 - AluSg SINE Alu -11 299 1 569 249 74 47 chr5 8394677 8394934 -191235216 - LTR37B LTR ERV1 -64 404 141 510 225 48 37 chr5 8395646 8395833 -191234317 + MER53 DNA DNA 1 189 0 389 232 18 9 chr5 8396061 8396173 -191233977 - MER89 LTR ERV1 0 559 447 660 192 41 7 chr5 8396547 8396693 -191233457 + MER20 DNA MER1_type 3 153 -66 567 236 76 55 chr5 8397141 8397416 -191232734 - MLT2F LTR ERVL -149 514 234 260 299 39 24 chr5 8397450 8397577 -191232573 - MLT2F LTR ERVL -533 130 2 451 111 0 67 chr5 8397836 8397926 -191232224 + FLAM_C SINE Alu 60 143 0 401 210 5 38 chr5 8398013 8398199 -191231951 + CT-rich Low_complexity Low_complexity 1 180 0 1768 166 45 55 chr5 8403117 8403539 -191226611 + Tigger2a DNA MER2_type 6 423 -11 322 323 93 0 chr5 8403704 8403865 -191226285 + MIR3 SINE MIR 20 195 -13 * 345 327 35 0 chr5 8403863 8403976 -191226174 + L2 LINE L2 3196 3312 -1 1132 80 6 6 chr5 8404010 8404185 -191225965 + (TGGA)n Simple_repeat Simple_repeat 3 177 0 286 364 52 19 chr5 8455897 8456166 -191173984 - L2 LINE L2 -2493 821 544 432 189 56 0 chr5 8457208 8457298 -191172852 + L1MA8 LINE L1 6191 6285 -6 21 0 0 0 chr5 8457299 8457320 -191172830 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5 8457723 8457760 -191172390 + (TC)n Simple_repeat Simple_repeat 2 38 0 324 0 0 0 chr5 8457762 8457798 -191172352 + (TG)n Simple_repeat Simple_repeat 1 36 0 2172 109 3 3 chr5 8458945 8459239 -191170911 - AluSx SINE Alu -18 294 1 304 213 213 0 chr5 8460676 8460784 -191169366 - L2 LINE L2 -220 3052 2922 291 28 0 0 chr5 8461070 8461106 -191169044 + (CA)n Simple_repeat Simple_repeat 2 37 0 1509 209 65 18 chr5 8461121 8461481 -191168669 - MLT2D LTR ERVL -40 424 1 223 245 21 0 chr5 8461952 8462046 -191168104 + (TG)n Simple_repeat Simple_repeat 1 96 0 429 241 18 0 chr5 8462068 8462238 -191167912 + (TG)n Simple_repeat Simple_repeat 1 173 0 238 300 29 0 chr5 8462238 8462308 -191167842 + (CGTG)n Simple_repeat Simple_repeat 1 72 0 587 214 17 6 chr5 8462310 8462488 -191167662 + (TG)n Simple_repeat Simple_repeat 1 180 0 328 216 21 0 chr5 8462514 8462611 -191167539 + (TG)n Simple_repeat Simple_repeat 1 99 0 377 304 53 12 chr5 8463609 8463780 -191166370 + MIR SINE MIR 64 241 -21 1244 226 66 31 chr5 8464052 8464370 -191165780 + MER58B DNA MER1_type 1 329 -12 1263 227 93 41 chr5 8465183 8465623 -191164527 + MLT1C LTR MaLR 1 463 -4 204 214 89 0 chr5 8465656 8465712 -191164438 + L2 LINE L2 3210 3270 -2 338 325 89 10 chr5 8467402 8467605 -191162545 + MIR SINE MIR 16 234 -28 21 36 0 0 chr5 8467832 8467860 -191162290 + AT_rich Low_complexity Low_complexity 1 28 0 391 220 80 0 chr5 8468714 8468814 -191161336 + LTR16C LTR ERVL 380 487 -4 21 36 0 0 chr5 8469151 8469179 -191160971 + AT_rich Low_complexity Low_complexity 1 28 0 240 242 88 22 chr5 8469327 8469418 -191160732 - L1M4c LINE L1 -4667 1717 1621 212 208 0 21 chr5 8471563 8471611 -191158539 + GA-rich Low_complexity Low_complexity 4 50 0 480 316 113 0 chr5 8472466 8472643 -191157507 - MIR SINE MIR -44 218 22 2058 227 69 30 chr5 8474482 8475178 -191154972 + L1ME1 LINE L1 4372 5094 -1052 1894 202 18 27 chr5 8475186 8475763 -191154387 + L1P LINE L1 2856 3620 -2526 3364 79 9 5 chr5 8475763 8476205 -191153945 - MLT2A1 LTR ERVL 0 444 1 1894 202 18 27 chr5 8476205 8476281 -191153869 + L1P LINE L1 3620 3695 -2451 224 30 30 0 chr5 8476263 8476296 -191153854 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 * 1951 104 66 21 chr5 8477093 8477380 -191152770 - AluSq SINE Alu -12 301 2 1610 173 24 64 chr5 8477601 8477976 -191152174 + MLT1A1 LTR MaLR 1 360 -5 2454 68 3 3 chr5 8478159 8478455 -191151695 + AluY SINE Alu 1 296 -15 1163 232 95 34 chr5 8478763 8479015 -191151135 - MLT1C LTR MaLR 0 467 183 2243 106 0 0 chr5 8479015 8479308 -191150842 - AluSc SINE Alu -16 293 1 1163 232 95 34 chr5 8479308 8479435 -191150715 - MLT1C LTR MaLR -284 183 65 1400 123 14 19 chr5 8479573 8479784 -191150366 - THE1B LTR MaLR 0 364 155 1144 140 6 0 chr5 8479784 8479955 -191150195 + AluSc SINE Alu 1 172 -137 234 170 21 0 chr5 8480057 8480104 -191150046 + MER5A DNA MER1_type 81 128 -61 726 274 17 6 chr5 8482748 8482927 -191147223 + MLT1H1 LTR MaLR 1 181 -374 474 283 107 22 chr5 8482995 8483252 -191146898 + MLT1G1 LTR MaLR 190 491 -76 5599 129 32 13 chr5 8484528 8484587 -191145563 + L1PA13 LINE L1 3616 3672 -2491 333 0 0 0 chr5 8484587 8484624 -191145526 + (CA)n Simple_repeat Simple_repeat 2 38 0 5599 129 32 13 chr5 8484624 8487020 -191143130 + L1PA13 LINE L1 3672 6157 -6 720 232 38 64 chr5 8487036 8488017 -191142133 + L1ME1 LINE L1 5083 6043 -123 261 0 0 0 chr5 8488216 8488245 -191141905 + (A)n Simple_repeat Simple_repeat 1 29 0 2429 106 25 11 chr5 8488263 8488622 -191141528 + THE1B LTR MaLR 1 364 0 3671 127 28 55 chr5 8489293 8489971 -191140179 + L1MC1 LINE L1 5674 6333 0 335 194 125 56 chr5 8490772 8490916 -191139234 + L1ME2 LINE L1 5700 5856 -308 906 251 24 0 chr5 8491012 8491223 -191138927 - MIR SINE MIR 0 262 47 845 143 0 19 chr5 8492177 8492331 -191137819 - L1MA5 LINE L1 -6 6294 6144 3761 98 11 4 chr5 8492340 8492881 -191137269 + L1P LINE L1 4186 4730 -1416 206 206 0 0 chr5 8493152 8493186 -191136964 + polypurine Low_complexity Low_complexity 3 36 0 464 265 0 7 chr5 8495054 8495355 -191134795 + (CA)n Simple_repeat Simple_repeat 1 298 0 1072 244 83 77 chr5 8495670 8496166 -191133984 + MLT1F1 LTR MaLR 68 566 -1 1275 141 7 8 chr5 8496478 8496699 -191133451 - MLT2B3 LTR ERVL -195 219 1 1590 231 37 22 chr5 8496703 8497162 -191132988 - MLT1C LTR MaLR -1 466 1 228 275 65 36 chr5 8499373 8499511 -191130639 + L1MC4a LINE L1 5254 5395 -2413 500 251 212 8 chr5 8499627 8499886 -191130264 + L2 LINE L2 2598 2909 -405 226 182 23 0 chr5 8499889 8499933 -191130217 + MLT1G LTR MaLR 1 45 -550 1963 183 42 7 chr5 8499934 8500308 -191129842 + MLT2D LTR ERVL 1 479 -41 225 0 0 0 chr5 8500321 8500346 -191129804 + (TG)n Simple_repeat Simple_repeat 2 26 0 1287 204 31 40 chr5 8500486 8500836 -191129314 + MLT1G LTR MaLR 161 571 0 615 280 69 55 chr5 8500884 8501263 -191128887 + L2 LINE L2 2926 3309 -4 1126 287 30 38 chr5 8501290 8501816 -191128334 + L1MC4a LINE L1 5407 5928 -1880 726 150 92 0 chr5 8502840 8503023 -191127127 + AluSg/x SINE Alu 117 313 0 1130 74 101 0 chr5 8503023 8503172 -191126978 - THE1B LTR MaLR -200 164 1 322 206 98 22 chr5 8503905 8503997 -191126153 - MLT1D LTR MaLR -356 149 51 230 285 156 38 chr5 8505207 8505393 -191124757 + MIR SINE MIR 31 238 -24 628 201 98 24 chr5 8507485 8507649 -191122501 - MER45A DNA AcHobo 0 178 3 5427 106 24 20 chr5 8507941 8507974 -191122176 + L1PA16 LINE L1 5332 5363 -803 1156 59 0 182 chr5 8507974 8508210 -191121940 + 7SK RNA RNA 1 193 0 5427 106 24 20 chr5 8508210 8509007 -191121143 + L1PA16 LINE L1 5363 6165 -1 1864 36 54 0 chr5 8509697 8509921 -191120229 + AluY SINE Alu 2 237 -74 247 49 49 0 chr5 8510195 8510236 -191119914 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 1308 48 0 12 chr5 8510237 8510405 -191119745 - L1PA5 LINE L1 -1 6153 5988 1018 273 217 16 chr5 8513456 8513832 -191116318 + LTR50 LTR ERVL 79 378 -417 2332 51 17 0 chr5 8513832 8514126 -191116024 - L1PA7 LINE L1 -2 6152 5854 1018 273 217 16 chr5 8514126 8514321 -191115829 + LTR50 LTR ERVL 378 765 -30 233 232 146 0 chr5 8514505 8514587 -191115563 - MLT1K LTR MaLR 0 588 495 866 318 75 32 chr5 8514767 8515236 -191114914 - MLT1K LTR MaLR -99 489 1 1214 265 40 11 chr5 8515350 8515697 -191114453 + LTR16B LTR ERVL 108 464 0 13805 148 11 112 chr5 8517430 8520647 -191109503 + L1P LINE L1 12 2904 -3242 2087 259 131 35 chr5 8520752 8521723 -191108427 - HAL1 LINE L1 -307 2200 1137 479 214 5 2 chr5 8522321 8522754 -191107396 + (CA)n Simple_repeat Simple_repeat 1 434 0 196 286 60 24 chr5 8523056 8523140 -191107010 - MIR SINE MIR -31 231 145 16668 112 10 4 chr5 8523362 8526659 -191103491 + L1PA8 LINE L1 2855 6171 -1 30 0 0 0 chr5 8526659 8526689 -191103461 + AT_rich Low_complexity Low_complexity 1 30 0 1391 163 67 15 chr5 8526692 8526850 -191103300 + L1MA10 LINE L1 5986 6134 -200 402 108 0 0 chr5 8526850 8526915 -191103235 + (CCAA)n Simple_repeat Simple_repeat 3 67 0 1391 163 67 15 chr5 8526915 8527087 -191103063 + L1MA10 LINE L1 6134 6333 -1 318 275 92 98 chr5 8528128 8528455 -191101695 - L2 LINE L2 -1366 1948 1624 1601 190 10 13 chr5 8528607 8528907 -191101243 + AluJo SINE Alu 1 299 -13 488 295 80 68 chr5 8530338 8530751 -191099399 - L2 LINE L2 -1268 2046 1629 7586 55 124 8 chr5 8531802 8532848 -191097302 + L1P LINE L1 4 1171 -4975 * 24525 28 0 3 chr5 8532837 8535739 -191094411 + L1P LINE L1 1794 4686 -1460 21 0 0 0 chr5 8538209 8538230 -191091920 + AT_rich Low_complexity Low_complexity 1 21 0 361 278 72 49 chr5 8538842 8539105 -191091045 + L1M4 LINE L1 4562 4830 -1316 326 275 66 44 chr5 8539391 8539573 -191090577 + L1M4 LINE L1 5144 5329 -817 198 174 0 0 chr5 8539696 8539742 -191090408 + (TG)n Simple_repeat Simple_repeat 1 46 0 2200 182 33 12 chr5 8539957 8540381 -191089769 - L1MC1 LINE L1 -2 6331 5899 231 198 238 8 chr5 8541326 8541452 -191088698 - LTR33A LTR ERVL -51 472 318 389 264 31 78 chr5 8544168 8544361 -191085789 - MLT1J2 LTR MaLR 0 450 267 231 105 35 53 chr5 8545026 8545083 -191085067 + T-rich Low_complexity Low_complexity 3 58 0 1248 264 105 28 chr5 8545662 8546158 -191083992 + MER90 LTR ERV1 81 614 0 4922 54 7 3 chr5 8546450 8547027 -191083123 + L1PA5 LINE L1 5571 6149 -5 28 0 0 0 chr5 8547027 8547055 -191083095 + AT_rich Low_complexity Low_complexity 1 28 0 822 243 51 31 chr5 8547739 8548094 -191082056 + L1ME1 LINE L1 2108 2449 -3766 2433 221 56 26 chr5 8548173 8548212 -191081938 + L1ME1 LINE L1 5517 5553 -682 2025 128 0 41 chr5 8548212 8548531 -191081619 + AluSx SINE Alu 1 306 -6 2433 221 56 26 chr5 8548531 8549184 -191080966 + L1ME1 LINE L1 5553 6230 -5 434 319 24 0 chr5 8549831 8550000 -191080150 + MER63A DNA MER1_type 1 173 -37 207 197 13 26 chr5 8550268 8550344 -191079806 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 222 323 38 70 chr5 8551212 8551398 -191078752 + MIR SINE MIR 46 225 -37 366 270 50 0 chr5 8551982 8552082 -191078068 + MIR3 SINE MIR 100 204 -4 22 0 0 0 chr5 8552319 8552341 -191077809 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 8553095 8553117 -191077033 + AT_rich Low_complexity Low_complexity 1 22 0 210 118 0 0 chr5 8553750 8553784 -191076366 + (A)n Simple_repeat Simple_repeat 1 34 0 454 286 112 69 chr5 8553892 8554519 -191075631 + L1M4c LINE L1 1137 2018 -883 1073 153 36 31 chr5 8554744 8554940 -191075210 - MER3 DNA MER1_type 0 209 13 292 241 71 16 chr5 8555085 8555246 -191074904 + L1M4c LINE L1 2480 2698 -3959 424 167 0 0 chr5 8555263 8555335 -191074815 - MER116 DNA Mariner -3 77 6 416 302 72 29 chr5 8555368 8555745 -191074405 + L1M4c LINE L1 2705 3097 -3443 320 299 91 16 chr5 8556801 8556988 -191073162 - L3 LINE CR1 -311 1266 1066 388 253 163 30 chr5 8558484 8558650 -191071500 - MIR SINE MIR -58 204 17 280 366 49 42 chr5 8559186 8559328 -191070822 - L2 LINE L2 -3 3269 3127 501 122 20 10 chr5 8559422 8559520 -191070630 + CT-rich Low_complexity Low_complexity 3 101 0 1579 196 32 0 chr5 8559583 8559863 -191070287 - AluJb SINE Alu -23 289 1 198 0 0 0 chr5 8559905 8559927 -191070223 + (CA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr5 8559927 8559949 -191070201 + (TG)n Simple_repeat Simple_repeat 2 23 0 1884 176 9 21 chr5 8559954 8560294 -191069856 - MLT2C1 LTR ERVL -61 336 1 231 311 95 0 chr5 8560368 8560442 -191069708 - MER5B DNA MER1_type -6 172 92 1054 270 77 70 chr5 8560490 8561023 -191069127 + Charlie7 DNA MER1_type 2 543 -2069 1465 148 13 4 chr5 8561023 8561252 -191068898 + L1PA13 LINE L1 5914 6144 -19 1054 270 77 70 chr5 8561252 8561432 -191068718 + Charlie7 DNA MER1_type 543 720 -1892 211 109 55 55 chr5 8561496 8561551 -191068599 + (CAATA)n Simple_repeat Simple_repeat 3 57 0 1120 240 59 57 chr5 8561682 8562070 -191068080 - MLT1B LTR MaLR 0 390 2 2419 65 0 0 chr5 8562096 8562390 -191067760 - AluY SINE Alu -17 294 1 526 301 51 20 chr5 8562633 8562829 -191067321 - L2 LINE L2 0 3313 3112 971 334 85 27 chr5 8562956 8563594 -191066556 - L2 LINE L2 -1262 2052 1378 278 167 0 0 chr5 8566290 8566332 -191063818 + 5S rRNA rRNA 1 42 -79 278 167 0 0 chr5 8566435 8566477 -191063673 + 5S rRNA rRNA 1 42 -79 265 167 0 0 chr5 8566525 8566567 -191063583 + 5S rRNA rRNA 1 42 -79 662 169 12 0 chr5 8568271 8568431 -191061719 + (TGGA)n Simple_repeat Simple_repeat 1 162 0 322 204 13 112 chr5 8568949 8569101 -191061049 + HAL1 LINE L1 100 236 -2271 729 269 88 70 chr5 8569198 8569329 -191060821 + HAL1 LINE L1 418 545 -1962 713 259 40 0 chr5 8569329 8569530 -191060620 + MER3 DNA MER1_type 1 209 0 729 269 88 70 chr5 8569530 8569886 -191060264 + HAL1 LINE L1 545 923 -1584 228 35 0 0 chr5 8569886 8569915 -191060235 + (CAA)n Simple_repeat Simple_repeat 2 30 0 729 269 88 70 chr5 8569915 8570121 -191060029 + HAL1 LINE L1 923 1124 -1383 313 319 0 0 chr5 8571029 8571120 -191059030 + MIR SINE MIR 41 131 -77 22 0 0 0 chr5 8571455 8571477 -191058673 + AT_rich Low_complexity Low_complexity 1 22 0 2862 120 31 5 chr5 8571761 8572178 -191057972 - MSTA LTR MaLR 0 428 1 3089 154 27 8 chr5 8572178 8572698 -191057452 - MSTA-int LTR MaLR 0 1651 1122 1913 126 3 85 chr5 8572696 8573061 -191057089 + MSTA-int LTR MaLR 1317 1651 0 * 2707 140 19 19 chr5 8573061 8573489 -191056661 + MSTA LTR MaLR 1 428 0 333 330 30 0 chr5 8573872 8573972 -191056178 - MER5A DNA MER1_type -77 112 10 197 277 21 0 chr5 8574048 8574095 -191056055 + L2 LINE L2 3225 3272 0 322 301 90 9 chr5 8574669 8574785 -191055365 + MIR SINE MIR 43 168 -62 241 300 54 56 chr5 8575048 8575192 -191054958 + MIR SINE MIR 15 156 -64 590 181 123 32 chr5 8575920 8576075 -191054075 + ERVL LTR ERVL 3443 3611 -2153 8315 16 3 0 chr5 8576732 8578178 -191051972 - L1PA2 LINE L1 0 6155 4711 209 108 27 0 chr5 8578324 8578361 -191051789 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 569 274 21 11 chr5 8580104 8580290 -191049860 + MIR SINE MIR 65 252 -10 223 255 0 0 chr5 8580886 8580937 -191049213 + A-rich Low_complexity Low_complexity 2 52 0 1771 177 76 0 chr5 8581468 8581784 -191048366 + MSTB LTR MaLR 87 426 0 436 57 101 6 chr5 8581980 8582138 -191048012 + (TA)n Simple_repeat Simple_repeat 2 174 0 529 248 15 7 chr5 8583695 8583832 -191046318 - LTR41 LTR ERVL -618 155 18 365 262 200 19 chr5 8583873 8584217 -191045933 - L2 LINE L2 -71 3242 2820 499 354 0 0 chr5 8584225 8584400 -191045750 + (TG)n Simple_repeat Simple_repeat 1 175 0 852 257 76 16 chr5 8584617 8584920 -191045230 - L2 LINE L2 -512 2802 2482 293 127 18 0 chr5 8587146 8587201 -191042949 - MSTB1 LTR MaLR 0 432 377 393 154 0 0 chr5 8587201 8587292 -191042858 + (TA)n Simple_repeat Simple_repeat 1 91 0 1831 182 73 0 chr5 8587292 8587633 -191042517 - MSTB1 LTR MaLR -65 367 2 814 103 0 0 chr5 8587795 8587902 -191042248 + AluSg/x SINE Alu 188 294 -15 625 240 62 5 chr5 8588461 8588653 -191041497 - L1MD3 LINE L1 0 7995 7793 228 149 0 43 chr5 8588679 8588726 -191041424 + MLT1L LTR MaLR 567 611 -4 396 178 122 11 chr5 8589894 8589984 -191040166 - MLT1J LTR MaLR 0 511 412 592 258 28 28 chr5 8590176 8590354 -191039796 - MLT1J LTR MaLR -330 181 4 1121 247 160 15 chr5 8590434 8590835 -191039315 - LTR40b LTR ERVL 0 462 4 599 71 12 0 chr5 8592323 8592408 -191037742 - AluY SINE Alu -13 298 213 6833 71 6 3 chr5 8592514 8593700 -191036450 + L1PA8 LINE L1 4972 6166 -6 1859 185 26 4 chr5 8593707 8594077 -191036073 - L1MA5 LINE L1 -153 6147 5777 248 268 0 0 chr5 8594030 8594086 -191036064 + L1M2 LINE L1 5668 5723 -577 * 274 294 56 37 chr5 8594297 8594494 -191035656 - L1ME LINE L1 -480 5690 5487 388 318 71 18 chr5 8595753 8595923 -191034227 - HAL1 LINE L1 -938 1569 1391 5888 168 15 26 chr5 8596048 8598202 -191031948 - L1PB1 LINE L1 -3 6148 4028 21 36 0 0 chr5 8598538 8598566 -191031584 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr5 8600732 8600760 -191029390 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 337 311 34 38 chr5 8601975 8602184 -191027966 + MIR SINE MIR 23 230 -32 260 281 31 70 chr5 8602451 8602579 -191027571 + MER94 DNA DNA 9 131 -3 1672 226 20 6 chr5 8605044 8605394 -191024756 - MER4D LTR ERV1 0 903 549 727 152 23 0 chr5 8605424 8605556 -191024594 - MER49 LTR ERV1 -638 285 151 * 1235 176 23 38 chr5 8605555 8605792 -191024358 - MER49 LTR ERV1 -666 257 23 2029 154 0 0 chr5 8605792 8606097 -191024053 - AluSx SINE Alu -7 305 1 1235 176 23 38 chr5 8606097 8606120 -191024030 - MER49 LTR ERV1 -900 23 1 235 231 0 0 chr5 8606379 8606431 -191023719 + A-rich Low_complexity Low_complexity 4 55 0 2065 144 0 3 chr5 8607932 8608231 -191021919 - AluSx SINE Alu -14 298 1 281 307 33 20 chr5 8608341 8608494 -191021656 + MIR SINE MIR 60 214 -48 1933 142 45 10 chr5 8610108 8610397 -191019753 + AluSx SINE Alu 1 299 -13 523 317 61 15 chr5 8611334 8611596 -191018554 + MLT2E LTR ERVL 31 304 -324 195 42 0 0 chr5 8612040 8612064 -191018086 + (TG)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr5 8613249 8613286 -191016864 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 8613312 8613333 -191016817 + AT_rich Low_complexity Low_complexity 1 21 0 254 208 51 45 chr5 8613343 8613521 -191016629 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 24 0 0 0 chr5 8613521 8613545 -191016605 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 8613709 8613738 -191016412 + AT_rich Low_complexity Low_complexity 1 29 0 651 198 0 0 chr5 8614477 8614603 -191015547 + L1MB4 LINE L1 6038 6163 -17 316 320 8 16 chr5 8615502 8615630 -191014520 - MIR SINE MIR -20 242 116 25 0 0 0 chr5 8615881 8615906 -191014244 + AT_rich Low_complexity Low_complexity 1 25 0 6074 100 18 19 chr5 8615947 8616149 -191014001 - L1PA14 LINE L1 -11 6150 5949 1786 161 14 3 chr5 8616149 8616440 -191013710 - AluSx SINE Alu -18 294 1 6074 100 18 19 chr5 8616440 8617789 -191012361 - L1PA14 LINE L1 -212 5949 4603 1492 163 30 22 chr5 8617789 8618059 -191012091 - THE1C LTR MaLR -103 272 1 28 48 0 0 chr5 8618059 8618101 -191012049 + AT_rich Low_complexity Low_complexity 1 42 0 1682 160 65 0 chr5 8619438 8619713 -191010437 + AluSx SINE Alu 1 293 -19 768 210 28 23 chr5 8620401 8620577 -191009573 + MER45A DNA AcHobo 2 178 0 259 208 44 30 chr5 8621893 8622011 -191008139 + MLT1G1 LTR MaLR 319 409 0 1588 192 35 24 chr5 8623301 8623640 -191006510 - MER61A LTR ERV1 0 343 1 250 314 38 0 chr5 8624462 8624567 -191005583 + L1ME LINE L1 5576 5684 -437 1655 148 3 48 chr5 8624822 8625112 -191005038 - AluSx SINE Alu -5 307 31 405 140 18 9 chr5 8625150 8625264 -191004886 + (TA)n Simple_repeat Simple_repeat 2 116 0 844 177 89 58 chr5 8625314 8625574 -191004576 + MLT1E2 LTR MaLR 71 332 -322 1430 139 57 16 chr5 8625574 8625818 -191004332 + MER74A LTR ERVL 1 254 -304 699 201 67 18 chr5 8625818 8625982 -191004168 - LOR1b LTR ERV1 0 461 290 511 202 219 43 chr5 8626117 8626350 -191003800 - LOR1b LTR ERV1 -109 352 79 1106 206 66 8 chr5 8626377 8626634 -191003516 + MER74A LTR ERVL 250 521 -37 1337 251 29 0 chr5 8626715 8627022 -191003128 + MLT1E2 LTR MaLR 311 626 0 303 93 0 0 chr5 8627027 8627070 -191003080 + (ATG)n Simple_repeat Simple_repeat 2 44 0 2461 116 29 0 chr5 8628955 8629299 -191000851 + L1PB3 LINE L1 5800 6153 -1 757 276 61 0 chr5 8629513 8629827 -191000323 + L2 LINE L2 2779 3114 -199 248 258 159 71 chr5 8629997 8630179 -190999971 + L2 LINE L2 3102 3299 -14 201 282 60 60 chr5 8630196 8630313 -190999837 - L2 LINE L2 -247 3025 2909 1183 226 66 84 chr5 8630471 8630965 -190999185 + MLT1J LTR MaLR 1 485 -26 765 188 60 0 chr5 8630965 8631114 -190999036 - MER90 LTR ERV1 0 575 418 301 349 122 4 chr5 8632059 8632314 -190997836 - L2 LINE L2 -160 3112 2828 934 177 24 17 chr5 8632513 8632710 -190997440 + MSTA LTR MaLR 139 428 0 21 0 0 0 chr5 8633422 8633443 -190996707 + AT_rich Low_complexity Low_complexity 1 21 0 1809 214 59 0 chr5 8634043 8634449 -190995701 + L1MD3 LINE L1 7547 7976 -19 2066 112 137 3 chr5 8634712 8635034 -190995116 + MLT2A2 LTR ERVL 1 365 -88 1228 102 10 56 chr5 8635036 8635233 -190994917 + THE1B LTR MaLR 177 364 0 1323 206 155 35 chr5 8635308 8635741 -190994409 + MLT1D LTR MaLR 1 485 -20 1072 263 89 9 chr5 8636213 8636551 -190993599 - MLT1A1 LTR MaLR 0 365 1 478 236 73 55 chr5 8637113 8637333 -190992817 - LTR67 LTR ERVL -266 291 68 257 209 0 0 chr5 8637373 8637416 -190992734 + polypurine Low_complexity Low_complexity 3 45 0 2166 94 0 13 chr5 8637460 8637758 -190992392 - AluSq SINE Alu -19 294 1 29 28 0 0 chr5 8638266 8638302 -190991848 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 8638529 8638551 -190991599 + AT_rich Low_complexity Low_complexity 1 22 0 2013 133 3 3 chr5 8638832 8639133 -190991017 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr5 8639171 8639202 -190990948 + AT_rich Low_complexity Low_complexity 1 31 0 3049 181 160 96 chr5 8639254 8639542 -190990608 + L1MC3 LINE L1 6714 6982 -803 225 65 0 0 chr5 8639542 8639573 -190990577 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3049 181 160 96 chr5 8639573 8639629 -190990521 + L1MC3 LINE L1 6982 7033 -752 282 286 0 0 chr5 8639629 8639706 -190990444 + MLT1F1 LTR MaLR 35 111 -456 3049 181 160 96 chr5 8639706 8640274 -190989876 + L1MC3 LINE L1 7033 7766 -19 381 185 60 7 chr5 8640290 8640441 -190989709 + (TA)n Simple_repeat Simple_repeat 1 159 0 203 188 45 8 chr5 8640452 8640585 -190989565 + (TA)n Simple_repeat Simple_repeat 2 139 0 375 315 126 49 chr5 8640755 8641406 -190988744 + L1M4 LINE L1 3716 4416 -1730 1652 144 26 58 chr5 8641692 8642073 -190988077 - L1PA13 LINE L1 -1 6162 5794 21 57 0 0 chr5 8642536 8642571 -190987579 + AT_rich Low_complexity Low_complexity 1 35 0 18916 100 11 31 chr5 8642589 8645344 -190984806 + Charlie3 DNA MER1_type 1 2700 -10 269 267 6 0 chr5 8645419 8645595 -190984555 + (CA)n Simple_repeat Simple_repeat 1 177 0 439 311 0 16 chr5 8645633 8645816 -190984334 + (CA)n Simple_repeat Simple_repeat 1 180 0 312 281 0 0 chr5 8645852 8646030 -190984120 + (CA)n Simple_repeat Simple_repeat 2 179 0 2113 128 67 21 chr5 8746507 8746882 -190883268 - LTR7 LTR ERV1 -58 392 1 2094 82 7 23 chr5 8746882 8747186 -190882964 - HERVH LTR ERV1 0 7713 7415 2811 98 2 62 chr5 8747186 8747636 -190882514 - HERVH LTR ERV1 -134 7579 7157 347 235 49 0 chr5 8747606 8747687 -190882463 - HERVH LTR ERV1 -1670 6043 5959 * 4757 27 0 0 chr5 8747692 8748255 -190881895 - L1PA4 LINE L1 -750 5396 4834 6665 30 3 3 chr5 8748255 8749023 -190881127 + L1PA4 LINE L1 5377 6154 -1 1555 78 46 1 chr5 8749024 8749369 -190880781 + L1P3 LINE L1 5107 5465 -707 34338 116 10 27 chr5 8749469 8755196 -190874954 - HERVH LTR ERV1 -1766 5947 1 2248 137 108 7 chr5 8755196 8755605 -190874545 - LTR7 LTR ERV1 0 450 1 2100 138 3 0 chr5 8756256 8756554 -190873596 - AluSx SINE Alu -13 299 1 1759 62 0 0 chr5 8756678 8756887 -190873263 - AluY SINE Alu -14 297 89 302 229 0 0 chr5 8758563 8758624 -190871526 - MLT1I LTR MaLR -1 408 348 223 354 24 24 chr5 8759549 8759676 -190870474 + MER5A DNA MER1_type 38 164 -25 309 344 16 21 chr5 8759747 8759939 -190870211 + L2 LINE L2 2458 2648 -666 417 302 34 6 chr5 8760094 8760273 -190869877 + MER20 DNA MER1_type 36 219 0 236 310 23 0 chr5 8760437 8760524 -190869626 + MLT1I LTR MaLR 317 405 -4 2478 78 5 111 chr5 8760550 8760972 -190869178 - MER51B LTR ERV1 0 377 1 1528 181 44 17 chr5 8763313 8763677 -190866473 - AluSq SINE Alu 0 372 1 206 322 91 13 chr5 8764724 8764850 -190865300 - MIR SINE MIR -75 133 2 383 210 23 0 chr5 8765608 8765784 -190864366 + (CA)n Simple_repeat Simple_repeat 1 180 0 1840 116 81 18 chr5 8765842 8766157 -190863993 + AluSg SINE Alu 1 310 0 22 35 0 0 chr5 8766753 8766782 -190863368 + AT_rich Low_complexity Low_complexity 1 29 0 318 26 0 0 chr5 8767165 8767204 -190862946 + (CA)n Simple_repeat Simple_repeat 1 39 0 402 244 111 7 chr5 8767572 8767707 -190862443 + L2 LINE L2 3122 3270 -2 251 211 39 23 chr5 8768455 8768583 -190861567 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 * 367 195 35 41 chr5 8768505 8768674 -190861476 + (TA)n Simple_repeat Simple_repeat 1 168 0 22 80 0 0 chr5 8768720 8768770 -190861380 + AT_rich Low_complexity Low_complexity 1 50 0 333 0 0 0 chr5 8771918 8771955 -190858195 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 57 0 0 chr5 8772406 8772441 -190857709 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr5 8772818 8772842 -190857308 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 578 191 36 0 chr5 8773967 8774077 -190856073 - L1MB5 LINE L1 -37 6137 6024 383 83 33 0 chr5 8774064 8774124 -190856026 + L1MD3 LINE L1 7921 7982 -13 * 406 298 107 28 chr5 8775114 8775433 -190854717 - L2 LINE L2 -49 3264 2921 6241 31 19 3 chr5 8775807 8776549 -190853601 - L1PA4 LINE L1 0 6155 5402 4710 46 0 1 chr5 8776545 8777144 -190853006 + L1P LINE L1 4830 5424 -741 * 228 139 0 0 chr5 8777951 8777987 -190852163 + MER51A LTR ERV1 1 36 -598 * 967 184 162 5 chr5 8777976 8778236 -190851914 + MER51A LTR ERV1 334 629 -11 194 287 250 0 chr5 8778276 8778384 -190851766 - L2 LINE L2 0 3272 3138 305 171 29 0 chr5 8779123 8779193 -190850957 - L1PA16 LINE L1 0 6166 6095 5265 168 95 23 chr5 8779193 8780136 -190850014 + LTR28 LTR ERV1 1 1011 -9 998 163 0 77 chr5 8780147 8780283 -190849867 - L1PA16 LINE L1 -71 6095 5979 2375 100 0 0 chr5 8780283 8780582 -190849568 - AluSq SINE Alu -14 299 1 998 163 0 77 chr5 8780582 8780654 -190849496 - L1PA16 LINE L1 -187 5979 5903 225 65 0 0 chr5 8781814 8781845 -190848305 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 188 273 18 0 chr5 8781870 8781925 -190848225 - L2 LINE L2 -31 3282 3227 349 307 116 32 chr5 8781996 8782185 -190847965 - L2 LINE L2 -209 3104 2900 1359 134 0 15 chr5 8782370 8782572 -190847578 - AluSq SINE Alu -12 301 103 40 0 0 0 chr5 8782615 8782655 -190847495 + AT_rich Low_complexity Low_complexity 1 40 0 952 207 49 0 chr5 8782662 8782865 -190847285 - MER58A DNA MER1_type 0 224 12 24 0 0 0 chr5 8783075 8783099 -190847051 + AT_rich Low_complexity Low_complexity 1 24 0 292 362 48 29 chr5 8783304 8783514 -190846636 - L2 LINE L2 -526 2788 2575 214 179 0 0 chr5 8783558 8783597 -190846553 - L2 LINE L2 -866 2448 2410 318 234 65 32 chr5 8783846 8783970 -190846180 - MLT1J LTR MaLR -327 184 57 246 292 14 0 chr5 8784013 8784085 -190846065 - L2 LINE L2 -997 2317 2245 318 257 14 42 chr5 8784826 8784970 -190845180 - LTR52 LTR ERVL -271 150 11 563 321 16 25 chr5 8785106 8785323 -190844827 + MIR SINE MIR 16 231 -31 29 0 0 0 chr5 8787130 8787159 -190842991 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 8787355 8787383 -190842767 + AT_rich Low_complexity Low_complexity 1 28 0 403 188 72 58 chr5 8788196 8788334 -190841816 + L1MD2 LINE L1 6013 6152 -207 358 269 6 12 chr5 8788336 8788681 -190841469 + (CA)n Simple_repeat Simple_repeat 1 343 0 382 280 119 88 chr5 8792932 8793386 -190836764 + HAL1b LINE L1 220 687 -661 22 0 0 0 chr5 8793457 8793479 -190836671 + AT_rich Low_complexity Low_complexity 1 22 0 287 331 142 0 chr5 8794313 8794440 -190835710 - L2 LINE L2 0 3272 3128 596 289 5 32 chr5 8794507 8794694 -190835456 + MIR SINE MIR 71 252 -10 622 208 69 25 chr5 8794710 8794869 -190835281 + FRAM SINE Alu 1 166 0 210 339 169 0 chr5 8795582 8795706 -190834444 - L2 LINE L2 0 3272 3128 643 275 5 37 chr5 8795772 8795961 -190834189 + MIR SINE MIR 71 253 -9 706 216 49 25 chr5 8795975 8796137 -190834013 + FRAM SINE Alu 1 166 0 194 227 0 107 chr5 8796278 8796353 -190833797 - L2 LINE L2 0 3313 3247 729 175 15 0 chr5 8796575 8796712 -190833438 - MLT1F LTR MaLR 0 542 404 21 82 0 0 chr5 8797667 8797716 -190832434 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr5 8797793 8797815 -190832335 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 8798007 8798037 -190832113 + AT_rich Low_complexity Low_complexity 1 30 0 3453 127 7 39 chr5 8798427 8798970 -190831180 - MER1A DNA MER1_type 0 527 2 1833 54 50 8 chr5 8799534 8799795 -190830355 - L1P3 LINE L1 -400 5754 5483 * 2358 83 0 0 chr5 8799789 8800127 -190830023 + L1P LINE L1 4773 5110 -1036 3271 31 2 5 chr5 8800129 8800550 -190829600 - L1PA4 LINE L1 -453 5702 5283 3469 32 11 5 chr5 8800550 8800981 -190829169 + L1PA4 LINE L1 5719 6154 -1 902 77 97 5 chr5 8800982 8801178 -190828972 + L1P LINE L1 5107 5320 -826 2742 27 25 0 chr5 8801280 8801648 -190828502 - L1P2 LINE L1 -495 5659 5283 3544 34 5 5 chr5 8801648 8802082 -190828068 + L1PA4 LINE L1 5719 6154 -1 1837 72 13 4 chr5 8802082 8802458 -190827692 + L1P3 LINE L1 5105 5483 -689 22 0 0 0 chr5 8803198 8803220 -190826930 + AT_rich Low_complexity Low_complexity 1 22 0 199 325 94 26 chr5 8804315 8804432 -190825718 - MIR SINE MIR -6 256 132 1474 114 42 4 chr5 8804442 8804706 -190825444 + L1MC1 LINE L1 5649 5922 -411 1374 199 55 19 chr5 8804718 8805015 -190825135 + MLT1A1 LTR MaLR 31 341 -24 2200 172 39 9 chr5 8805015 8805446 -190824704 + L1MC1 LINE L1 5881 6324 -9 1374 199 55 19 chr5 8805446 8805460 -190824690 + MLT1A1 LTR MaLR 341 353 -12 2692 13 0 10 chr5 8806331 8806635 -190823515 - AluYa5 SINE Alu -10 301 1 342 321 132 6 chr5 8807033 8807192 -190822958 + L2 LINE L2 3125 3303 -10 234 0 0 0 chr5 8807279 8807305 -190822845 + (CA)n Simple_repeat Simple_repeat 2 27 0 761 64 27 0 chr5 8807434 8807544 -190822606 + (TATTG)n Simple_repeat Simple_repeat 1 113 0 2306 157 14 5 chr5 8807546 8807960 -190822190 - L1MB1 LINE L1 -11 6157 5740 782 188 19 19 chr5 8808255 8808415 -190821735 - L1PB4 LINE L1 -1 6155 5996 321 217 0 0 chr5 8808441 8808510 -190821640 - L1PB4 LINE L1 -90 6066 5998 316 212 0 0 chr5 8808541 8808607 -190821543 - L1PB4 LINE L1 -93 6063 5998 539 228 127 6 chr5 8808635 8808793 -190821357 - L1PB4 LINE L1 -90 6066 5890 291 191 0 0 chr5 8808968 8809031 -190821119 + (TG)n Simple_repeat Simple_repeat 2 64 0 4436 123 3 1 chr5 8810882 8811538 -190818612 - L1PA15 LINE L1 -13 6152 5496 277 297 40 0 chr5 8811577 8811678 -190818472 - L1M4 LINE L1 -1534 4612 4508 796 282 173 19 chr5 8811697 8812020 -190818130 + L2 LINE L2 2158 2530 -784 1180 152 5 10 chr5 8812030 8812234 -190817916 + MLT1A1 LTR MaLR 1 203 -162 185 0 40 0 chr5 8812240 8812265 -190817885 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 618 167 0 0 chr5 8813093 8813213 -190816937 - L1MA7 LINE L1 0 6291 6172 619 230 158 10 chr5 8813358 8813567 -190816583 + MLT1H LTR MaLR 79 318 -231 545 176 104 40 chr5 8813609 8813734 -190816416 + MLT1H LTR MaLR 402 534 -15 406 326 0 20 chr5 8813800 8813996 -190816154 - L1ME LINE L1 -418 5703 5512 615 273 76 52 chr5 8814719 8815339 -190814811 + L1M4 LINE L1 3784 4433 -1713 1078 194 64 67 chr5 8815339 8815684 -190814466 - MER2 DNA MER2_type 0 344 1 615 273 76 52 chr5 8815684 8815940 -190814210 + L1M4 LINE L1 4433 4681 -1465 1059 196 63 72 chr5 8816282 8816629 -190813521 - MER2 DNA MER2_type 0 344 1 325 273 56 39 chr5 8816629 8816915 -190813235 + L1ME3A LINE L1 4411 4701 -1445 286 256 12 12 chr5 8816941 8817023 -190813127 + L1ME3A LINE L1 5831 5912 -258 1148 215 64 82 chr5 8817274 8817740 -190812410 - MLT1C LTR MaLR -7 460 3 233 263 92 26 chr5 8817774 8817850 -190812300 + MIR SINE MIR 64 144 -118 5238 129 29 4 chr5 8817953 8819213 -190810937 - L1PA16 LINE L1 -4 6162 4877 746 175 138 3 chr5 8819550 8819731 -190810419 - MLT1J LTR MaLR -46 459 228 21 0 0 0 chr5 8820567 8820588 -190809562 + AT_rich Low_complexity Low_complexity 1 21 0 40122 39 24 2 chr5 8820611 8826630 -190803520 - L1PA3 LINE L1 0 6155 2 192 158 0 0 chr5 8827918 8827956 -190802194 + A-rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 8828097 8828125 -190802025 + AT_rich Low_complexity Low_complexity 1 28 0 479 323 108 53 chr5 8828648 8829063 -190801087 - L1MC4a LINE L1 -1980 5828 5391 267 206 0 14 chr5 8829082 8829155 -190800995 - L1MC4a LINE L1 -821 5345 5274 2192 121 3 0 chr5 8829427 8829734 -190800416 - AluSq SINE Alu -5 308 1 1082 221 103 29 chr5 8830047 8830395 -190799755 + MLT1A2 LTR MaLR 1 467 0 240 326 20 31 chr5 8830424 8830522 -190799628 + L3b LINE CR1 1328 1424 -159 1770 181 79 65 chr5 8832489 8832914 -190797236 - MER67D LTR ERV1 0 514 79 2242 119 48 20 chr5 8832914 8833268 -190796882 - THE1B LTR MaLR 0 364 1 1770 181 79 65 chr5 8833268 8833349 -190796801 - MER67D LTR ERV1 -435 79 1 833 241 20 24 chr5 8834369 8834622 -190795528 - MLT1J LTR MaLR -259 252 1 342 206 0 72 chr5 8834698 8834795 -190795355 + L1MC4 LINE L1 6614 6703 -1339 229 85 0 43 chr5 8834800 8834847 -190795303 + (TA)n Simple_repeat Simple_repeat 2 46 0 243 0 0 0 chr5 8834847 8834874 -190795276 + (CA)n Simple_repeat Simple_repeat 2 28 0 485 205 26 96 chr5 8834997 8835153 -190794997 - MIR SINE MIR -2 260 116 391 164 273 0 chr5 8836368 8836478 -190793672 - MER67D LTR ERV1 -5 509 370 243 0 0 0 chr5 8836480 8836507 -190793643 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2177 19 8 0 chr5 8836537 8836796 -190793354 - L1PA2 LINE L1 0 6155 5895 287 28 0 0 chr5 8836796 8836832 -190793318 + L1PA7 LINE L1 5738 5773 -382 1511 97 4 26 chr5 8836962 8837190 -190792960 + L1PA7 LINE L1 5930 6152 -2 458 222 0 8 chr5 8837218 8837335 -190792815 + (TATATG)n Simple_repeat Simple_repeat 3 118 0 1143 78 6 20 chr5 8838820 8838869 -190791281 + L1PA4 LINE L1 5702 5750 -405 2178 27 0 0 chr5 8838869 8839126 -190791024 - L1PA4 LINE L1 -4 6151 5895 1143 78 6 20 chr5 8839126 8839270 -190790880 + L1PA4 LINE L1 5750 5882 -273 1397 276 50 32 chr5 8839514 8840209 -190789941 + L1MC4 LINE L1 7039 7746 -296 720 40 40 10 chr5 8840209 8840309 -190789841 - MER11A LTR ERVK -14 1252 1150 317 217 58 132 chr5 8840338 8840633 -190789517 + L1MC4 LINE L1 7763 8035 -7 215 324 88 29 chr5 8840641 8840777 -190789373 - MIR3 SINE MIR -31 177 34 510 266 56 0 chr5 8841490 8841633 -190788517 + MIR SINE MIR 5 155 -107 1100 173 16 8 chr5 8843553 8843796 -190786354 - L1MA8 LINE L1 -234 6057 5813 544 270 0 0 chr5 8845096 8845207 -190784943 - FLAM_A SINE Alu -30 112 2 270 221 176 0 chr5 8845254 8845322 -190784828 - MIR SINE MIR -115 147 68 360 245 11 0 chr5 8845610 8845704 -190784446 - MIR SINE MIR 0 262 168 533 115 10 0 chr5 8845711 8845815 -190784335 - HSMAR2 DNA Mariner -1 1301 1197 1301 155 14 9 chr5 8845822 8846035 -190784115 - AluJo SINE Alu -24 288 75 742 131 5 5 chr5 8846035 8846223 -190783927 - HSMAR2 DNA Mariner -94 1208 918 3348 78 36 0 chr5 8896226 8896699 -190733451 + THE1A-int LTR MaLR 1091 1580 0 2228 90 11 74 chr5 8896701 8897078 -190733072 + THE1A LTR MaLR 3 355 0 1708 219 56 16 chr5 8897183 8897631 -190732519 + MLT1C LTR MaLR 1 466 -1 2350 81 0 0 chr5 8897722 8898019 -190732131 - AluY SINE Alu -12 299 3 205 220 121 33 chr5 8898319 8898410 -190731740 + MIR SINE MIR 132 230 -32 856 278 16 20 chr5 8898937 8899189 -190730961 + MIR SINE MIR 12 262 0 2158 115 0 7 chr5 8899265 8899586 -190730564 + AluSx SINE Alu 1 319 0 215 247 146 34 chr5 8900106 8900195 -190729955 - MIR SINE MIR -7 255 157 22 35 0 0 chr5 8901979 8902008 -190728142 + AT_rich Low_complexity Low_complexity 1 29 0 15498 129 19 32 chr5 8902039 8904803 -190725347 + Tigger4(Zombi) DNA MER2_type 1 2726 -5 21 0 0 0 chr5 8905551 8905572 -190724578 + AT_rich Low_complexity Low_complexity 1 21 0 489 143 44 15 chr5 8906361 8906704 -190723446 + (TAGA)n Simple_repeat Simple_repeat 1 353 0 1519 233 69 2 chr5 8906705 8907112 -190723038 - MLT2B1 LTR ERVL -56 464 31 21 0 0 0 chr5 8908014 8908035 -190722115 + AT_rich Low_complexity Low_complexity 1 21 0 182 286 0 0 chr5 8908607 8908642 -190721508 - L2 LINE L2 -94 3178 3144 1549 206 125 20 chr5 8908683 8909140 -190721010 + MLT1D LTR MaLR 1 505 0 1036 190 156 50 chr5 8909216 8909574 -190720576 - MSTD LTR MaLR 0 396 1 189 281 74 44 chr5 8909781 8909896 -190720254 - MIR SINE MIR -69 139 63 1071 268 17 0 chr5 8909995 8910286 -190719864 + LTR16A LTR ERVL 155 450 0 2647 188 39 26 chr5 8911976 8912009 -190718141 + L1MB8 LINE L1 5298 5329 -849 1947 144 32 32 chr5 8912009 8912384 -190717766 - THE1C LTR MaLR 0 375 1 2647 188 39 26 chr5 8912384 8913003 -190717147 + L1MB8 LINE L1 5329 5967 -211 314 161 46 146 chr5 8913429 8913595 -190716555 - L1P4 LINE L1 -314 5860 5711 302 183 0 14 chr5 8913588 8913659 -190716491 + L1MA9 LINE L1 6090 6159 -153 * 235 94 62 62 chr5 8913676 8913740 -190716410 + L1MA9 LINE L1 6239 6302 -10 245 155 12 119 chr5 8914047 8914131 -190716019 + L1MB7 LINE L1 5933 6007 -171 2291 128 14 8 chr5 8914858 8915211 -190714939 + THE1A LTR MaLR 1 355 0 689 51 31 0 chr5 8915211 8915309 -190714841 + THE1A-int LTR MaLR 1 101 -1479 24 0 0 0 chr5 8916338 8916362 -190713788 + AT_rich Low_complexity Low_complexity 1 24 0 4706 205 30 29 chr5 8916892 8918190 -190711960 - L1MD2 LINE L1 -1 6358 5058 207 0 0 0 chr5 8918190 8918213 -190711937 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4706 205 30 29 chr5 8918213 8918478 -190711672 - L1MD2 LINE L1 -1301 5058 4795 3021 147 30 63 chr5 8918616 8919249 -190710901 + LTR9 LTR ERV1 1 612 0 268 250 9 9 chr5 8919271 8919379 -190710771 + (CATATA)n Simple_repeat Simple_repeat 5 112 0 1730 185 3 10 chr5 8919486 8919784 -190710366 + AluJb SINE Alu 1 296 -16 231 125 0 0 chr5 8920519 8920559 -190709591 + (GA)n Simple_repeat Simple_repeat 1 40 0 1380 195 24 7 chr5 8921413 8921700 -190708450 - L1MC1 LINE L1 -6 6327 6036 2123 139 15 22 chr5 8921729 8922133 -190708017 - L1MC1 LINE L1 -276 6057 5657 3522 116 10 48 chr5 8922133 8922756 -190707394 - LTR14B LTR ERVK 0 608 10 2599 193 16 10 chr5 8922756 8923692 -190706458 - L1MC1 LINE L1 -677 5656 4713 2093 144 0 7 chr5 8923692 8923997 -190706153 - AluSc SINE Alu -6 303 1 2599 193 16 10 chr5 8923997 8924082 -190706068 - L1MC1 LINE L1 -1620 4713 4630 372 291 51 17 chr5 8924186 8924303 -190705847 + MER5C DNA MER1_type 4 124 -200 280 87 0 0 chr5 8924329 8924375 -190705775 + MER5C DNA MER1_type 233 278 -46 635 183 23 11 chr5 8925852 8926027 -190704123 + GA-rich Low_complexity Low_complexity 3 179 0 890 193 23 6 chr5 8926071 8926242 -190703908 - MER2 DNA MER2_type -171 174 1 980 156 92 29 chr5 8928367 8928605 -190701545 + MLT1D LTR MaLR 253 505 0 424 241 40 125 chr5 8928755 8929107 -190701043 + MLT1K LTR MaLR 151 472 -116 218 193 35 35 chr5 8929559 8929616 -190700534 - MIR SINE MIR -101 161 105 2754 238 36 13 chr5 8931034 8931829 -190698321 - L1ME2 LINE L1 -9 6155 5342 855 121 0 13 chr5 8931829 8931978 -190698172 + MER4A LTR ERV1 1 147 -517 1604 108 62 22 chr5 8932004 8932345 -190697805 + MER4A LTR ERV1 252 664 0 1229 246 59 60 chr5 8932345 8932949 -190697201 - L1ME2 LINE L1 -801 5345 4741 2345 75 0 16 chr5 8932949 8933257 -190696893 + AluY SINE Alu 9 311 0 1229 246 59 60 chr5 8933257 8933397 -190696753 - L1ME2 LINE L1 -1405 4741 4602 1971 208 27 0 chr5 8933580 8934055 -190696095 + Charlie1 DNA MER1_type 2207 2694 -67 2353 151 89 5 chr5 8935340 8935731 -190694419 + MSTB LTR MaLR 3 426 0 188 368 11 0 chr5 8936619 8936706 -190693444 - L2 LINE L2 -5 3308 3221 273 135 0 0 chr5 8936844 8936896 -190693254 + (CCA)n Simple_repeat Simple_repeat 1 52 0 1980 89 63 7 chr5 8937214 8937483 -190692667 + AluSc SINE Alu 1 284 -25 24 53 0 0 chr5 8938696 8938734 -190691416 + AT_rich Low_complexity Low_complexity 1 38 0 2554 43 7 7 chr5 8938824 8939127 -190691023 - AluY SINE Alu -8 303 1 230 79 0 26 chr5 8939996 8940034 -190690116 + (TTTC)n Simple_repeat Simple_repeat 3 39 0 194 335 57 10 chr5 8940382 8940495 -190689655 - MIR SINE MIR -82 126 6 692 241 22 0 chr5 8943135 8943272 -190686878 - AluJo SINE Alu -171 141 2 22 56 0 0 chr5 8943456 8943492 -190686658 + AT_rich Low_complexity Low_complexity 1 36 0 2410 246 104 15 chr5 8943618 8944672 -190685478 - L1ME2 LINE L1 -40 6518 5373 558 295 80 20 chr5 8944677 8945088 -190685062 - L1ME2 LINE L1 -3706 2834 2401 713 246 108 38 chr5 8945206 8945491 -190684659 - L1ME2 LINE L1 -4292 2429 2165 1844 160 7 0 chr5 8945491 8945791 -190684359 - AluSx SINE Alu -5 307 6 713 246 108 38 chr5 8945791 8945978 -190684172 - L1ME2 LINE L1 -4556 2165 1874 21 0 0 0 chr5 8946110 8946131 -190684019 + AT_rich Low_complexity Low_complexity 1 21 0 415 238 113 61 chr5 8947578 8947809 -190682341 + MLT1L LTR MaLR 8 250 -365 33 0 0 0 chr5 8949005 8949038 -190681112 + AT_rich Low_complexity Low_complexity 1 33 0 189 49 24 49 chr5 8949143 8949184 -190680966 + (TAA)n Simple_repeat Simple_repeat 2 41 0 190 106 43 0 chr5 8949219 8949266 -190680884 + (TA)n Simple_repeat Simple_repeat 2 50 0 268 188 27 20 chr5 8949324 8949473 -190680677 + (TA)n Simple_repeat Simple_repeat 1 150 0 2139 129 40 35 chr5 8949555 8949928 -190680222 - THE1C LTR MaLR 0 375 1 1602 181 0 11 chr5 8950917 8951194 -190678956 - AluJb SINE Alu -38 274 1 21 89 0 0 chr5 8951830 8951886 -190678264 + AT_rich Low_complexity Low_complexity 1 56 0 2224 94 3 13 chr5 8953578 8953876 -190676274 - AluSg SINE Alu -15 295 1 408 315 31 8 chr5 8954394 8954521 -190675629 - L2 LINE L2 0 3313 3184 29 0 0 0 chr5 8954675 8954704 -190675446 + AT_rich Low_complexity Low_complexity 1 29 0 245 346 53 45 chr5 8954783 8954916 -190675234 - MIR3 SINE MIR -26 182 49 482 259 0 0 chr5 8956451 8956559 -190673591 - MER45A DNA AcHobo 0 178 71 21 57 0 0 chr5 8960002 8960037 -190670113 + GC_rich Low_complexity Low_complexity 1 35 0 32 57 0 0 chr5 8960983 8961036 -190669114 + GC_rich Low_complexity Low_complexity 1 53 0 252 0 0 0 chr5 8962199 8962227 -190667923 + (T)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 8962449 8962470 -190667680 + AT_rich Low_complexity Low_complexity 1 21 0 246 315 48 67 chr5 8962883 8963048 -190667102 - L3b LINE CR1 -237 1346 1185 180 241 37 56 chr5 8963333 8963387 -190666763 - MIR SINE MIR -85 123 71 211 333 71 0 chr5 8964532 8964631 -190665519 - L2 LINE L2 -21 3292 3187 183 220 0 0 chr5 8964676 8964726 -190665424 + T-rich Low_complexity Low_complexity 1 50 0 671 248 171 5 chr5 8965743 8965965 -190664185 + MIR SINE MIR 1 259 -3 348 231 0 0 chr5 8966043 8966108 -190664042 - MIR SINE MIR -63 145 81 180 111 0 0 chr5 8967869 8967896 -190662254 + (TG)n Simple_repeat Simple_repeat 2 28 0 25 31 0 0 chr5 8968025 8968057 -190662093 + AT_rich Low_complexity Low_complexity 1 32 0 351 0 0 0 chr5 8968691 8968730 -190661420 + (CA)n Simple_repeat Simple_repeat 2 40 0 482 270 182 35 chr5 8968787 8969105 -190661045 - L1M4 LINE L1 -2660 3486 3122 403 293 55 85 chr5 8969111 8969417 -190660733 - MLT1I LTR MaLR -4 405 109 1434 271 125 17 chr5 8969417 8969952 -190660198 - MLT1G1 LTR MaLR 0 595 3 343 275 54 83 chr5 8970000 8970512 -190659638 - MLT1H LTR MaLR 0 549 15 1774 167 3 7 chr5 8970614 8970913 -190659237 - AluJb SINE Alu -14 298 1 413 232 36 58 chr5 8971830 8971968 -190658182 - ERVL LTR ERVL -2316 3448 3314 1011 133 40 96 chr5 8972051 8972300 -190657850 - THE1C LTR MaLR 0 375 141 268 103 0 0 chr5 8972276 8972315 -190657835 - THE1C LTR MaLR -389 39 1 * 747 266 75 50 chr5 8972356 8972618 -190657532 - MLT2E LTR ERVL -259 369 96 2113 115 3 16 chr5 8972618 8972923 -190657227 - AluSc SINE Alu -8 301 1 747 266 75 50 chr5 8972923 8972979 -190657171 - MLT2E LTR ERVL -532 96 43 2107 116 7 0 chr5 8973137 8973421 -190656729 - AluSx SINE Alu -26 286 1 4908 81 11 5 chr5 8973472 8974136 -190656014 + L1PA13 LINE L1 5476 6143 -20 180 0 0 0 chr5 8974141 8974161 -190655989 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 455 328 51 38 chr5 8974166 8974638 -190655512 - L1M4 LINE L1 -3235 2911 2434 26 0 0 0 chr5 8974996 8975022 -190655128 + AT_rich Low_complexity Low_complexity 1 26 0 200 227 0 0 chr5 8975082 8975126 -190655024 + A-rich Low_complexity Low_complexity 1 44 0 480 207 178 65 chr5 8976201 8976370 -190653780 + ORSL DNA AcHobo 81 268 -7 2702 17 0 0 chr5 8976547 8976845 -190653305 + AluYa5 SINE Alu 1 298 -13 392 243 84 99 chr5 8977492 8977694 -190652456 + MIR SINE MIR 20 218 -44 2456 52 3 16 chr5 8978042 8978351 -190651799 - AluY SINE Alu -6 305 1 315 143 26 13 chr5 8979668 8979745 -190650405 - L1MA7 LINE L1 -1 6290 6213 903 162 61 18 chr5 8979774 8980002 -190650148 - L1MA7 LINE L1 -22 6269 6032 299 333 42 17 chr5 8980917 8981037 -190649113 + MIR3 SINE MIR 65 187 -21 234 320 91 28 chr5 8981233 8981486 -190648664 + L1M4 LINE L1 4122 4390 -1756 231 276 48 35 chr5 8981965 8982110 -190648040 - L1M4 LINE L1 -1712 4434 4288 222 295 121 54 chr5 8982407 8982631 -190647519 + L2 LINE L2 3029 3267 -46 203 303 0 0 chr5 8982689 8982755 -190647395 + T-rich Low_complexity Low_complexity 3 68 0 2385 98 3 0 chr5 8983401 8983706 -190646444 - AluSg SINE Alu -4 306 1 1093 279 77 68 chr5 8983971 8984504 -190645646 - MER77 LTR ERV1 -6 599 62 257 266 266 23 chr5 8984605 8984778 -190645372 - MIR SINE MIR -33 229 15 734 189 128 36 chr5 8984786 8984982 -190645168 + MER20 DNA MER1_type 3 216 -3 1400 184 96 55 chr5 8985952 8986391 -190643759 - MLT1C LTR MaLR -9 458 2 271 28 0 0 chr5 8986576 8986612 -190643538 + MADE1 DNA Mariner 3 38 -42 246 32 0 0 chr5 8986865 8986896 -190643254 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 808 156 0 30 chr5 8986960 8987095 -190643055 - FLAM_C SINE Alu -2 131 1 2692 82 8 14 chr5 8988090 8988456 -190641694 + THE1B LTR MaLR 1 364 0 468 226 17 0 chr5 8988718 8988833 -190641317 + L1PB4 LINE L1 6038 6154 -2 198 365 12 12 chr5 8988859 8988944 -190641206 + L2 LINE L2 3229 3313 0 645 306 54 0 chr5 8989015 8989201 -190640949 - MIR SINE MIR -33 229 34 1650 190 39 33 chr5 8991032 8991395 -190638755 - MLT1A1 LTR MaLR 0 365 1 1392 198 89 51 chr5 8991726 8992025 -190638125 - MLT1C LTR MaLR 0 467 144 2284 116 47 11 chr5 8992025 8992387 -190637763 - THE1C LTR MaLR 0 375 1 1392 198 89 51 chr5 8992387 8992537 -190637613 - MLT1C LTR MaLR -323 144 1 664 239 23 11 chr5 8992657 8992833 -190637317 - MER45A DNA AcHobo 0 178 1 1073 280 40 23 chr5 8993447 8993770 -190636380 + L1ME LINE L1 55 390 -6006 216 0 0 0 chr5 8993770 8993794 -190636356 + (GA)n Simple_repeat Simple_repeat 2 25 0 1073 280 40 23 chr5 8993794 8993941 -190636209 + L1ME LINE L1 390 533 -5863 1716 256 42 7 chr5 8993957 8995208 -190634942 + L1ME LINE L1 2460 3815 -2400 276 125 0 42 chr5 8995255 8995327 -190634823 + (TA)n Simple_repeat Simple_repeat 1 69 0 326 287 45 38 chr5 8995331 8995488 -190634662 + L1ME LINE L1 3837 3994 -2221 2170 238 39 70 chr5 8995522 8996587 -190633563 + L1ME LINE L1 4440 5472 -743 1407 227 120 74 chr5 8996588 8997307 -190632843 + LTR1B LTR ERV1 1 752 -74 281 333 8 0 chr5 8997417 8997543 -190632607 + L1ME LINE L1 5465 5591 -644 * 570 207 9 0 chr5 8997529 8997672 -190632478 + L1MA10 LINE L1 5996 6299 -35 23 0 0 0 chr5 8998067 8998090 -190632060 + AT_rich Low_complexity Low_complexity 1 23 0 236 229 0 0 chr5 8998460 8998521 -190631629 + L1M4 LINE L1 4768 4828 -1318 269 272 22 29 chr5 8998972 8999108 -190631042 + L1M4 LINE L1 5696 5830 -348 380 238 0 0 chr5 9000749 9000829 -190629321 - MER82 DNA MER2_type -1 652 573 809 229 71 0 chr5 9000846 9001056 -190629094 - MER82 DNA MER2_type -426 227 3 349 299 107 22 chr5 9002175 9002399 -190627751 + MIR SINE MIR 17 259 -3 349 287 7 60 chr5 9003043 9003193 -190626957 - L2 LINE L2 -54 3259 3118 354 318 127 5 chr5 9003359 9003548 -190626602 + MIR SINE MIR 37 248 -14 2152 124 26 3 chr5 9003925 9004273 -190625877 - THE1B LTR MaLR 0 364 9 315 0 0 0 chr5 9004285 9004320 -190625830 + (CA)n Simple_repeat Simple_repeat 2 36 0 265 296 14 0 chr5 9005664 9005735 -190624415 - MIR SINE MIR -86 176 105 23 54 0 0 chr5 9006155 9006192 -190623958 + AT_rich Low_complexity Low_complexity 1 37 0 350 228 13 0 chr5 9006292 9006371 -190623779 + MER63 DNA MER1_type 44 749 -313 433 286 26 87 chr5 9006387 9006408 -190623742 - L1MC5 LINE L1 -264 7697 7676 1549 213 20 25 chr5 9006408 9006807 -190623343 + MLT2C1 LTR ERVL 1 397 0 433 286 26 87 chr5 9006807 9007212 -190622938 - L1MC5 LINE L1 -285 7676 7297 271 301 41 10 chr5 9007680 9007876 -190622274 - L1MC4 LINE L1 -994 7048 6847 307 362 50 14 chr5 9007888 9008029 -190622121 - L1MC4a LINE L1 -1120 6688 6543 2546 43 40 0 chr5 9008129 9008428 -190621722 + AluY SINE Alu 1 311 0 2499 51 0 6 chr5 9008860 9009171 -190620979 - AluY SINE Alu 0 311 3 772 265 133 27 chr5 9009195 9009880 -190620270 - L1MC4a LINE L1 -748 5398 5128 355 318 74 37 chr5 9010179 9010478 -190619672 - L1MC4a LINE L1 -1437 4709 4400 289 307 23 39 chr5 9010667 9010976 -190619174 - L1MC4a LINE L1 -1929 4217 3914 24 32 0 0 chr5 9011081 9011112 -190619038 + AT_rich Low_complexity Low_complexity 1 31 0 352 158 0 0 chr5 9011225 9011282 -190618868 + FLAM SINE Alu 61 117 -16 426 20 0 0 chr5 9011285 9011336 -190618814 + (CATA)n Simple_repeat Simple_repeat 2 52 0 5308 81 28 4 chr5 9013224 9013973 -190616177 - L1PA11 LINE L1 0 6174 5408 11694 134 25 21 chr5 9014424 9016493 -190613657 + Tigger1 DNA MER2_type 2 2078 -340 5413 146 10 24 chr5 9016516 9016645 -190613505 - L1PB3 LINE L1 0 6154 6025 2283 109 3 6 chr5 9016645 9016957 -190613193 - AluSx SINE Alu -1 311 1 5413 146 10 24 chr5 9016957 9018150 -190612000 - L1PB3 LINE L1 -129 6025 4853 311 83 0 0 chr5 9018150 9018198 -190611952 + Tigger1 DNA MER2_type 2068 2115 -303 3938 142 14 7 chr5 9018205 9018911 -190611239 - MER50 LTR ERV1 -23 711 1 1285 184 83 0 chr5 9018911 9019186 -190610964 + Tigger1 DNA MER2_type 2118 2415 -3 328 281 87 58 chr5 9019591 9019833 -190610317 - L1ME LINE L1 -336 5785 5537 386 165 65 24 chr5 9020376 9020546 -190609604 + (TA)n Simple_repeat Simple_repeat 1 177 0 28 0 0 0 chr5 9020548 9020576 -190609574 + AT_rich Low_complexity Low_complexity 1 28 0 47 19 0 0 chr5 9020701 9020755 -190609395 + AT_rich Low_complexity Low_complexity 1 54 0 23 54 0 0 chr5 9020872 9020909 -190609241 + AT_rich Low_complexity Low_complexity 1 37 0 773 225 11 16 chr5 9021686 9021873 -190608277 + MER5A DNA MER1_type 1 186 -3 676 218 262 17 chr5 9021984 9022393 -190607757 - MLT1H LTR MaLR -2 547 39 2352 90 3 0 chr5 9024525 9024835 -190605315 - AluY SINE Alu 0 311 1 954 192 0 0 chr5 9024985 9025136 -190605014 - AluJb SINE Alu -19 293 143 234 285 102 54 chr5 9025902 9026088 -190604062 - MLT1J LTR MaLR -294 217 23 226 303 86 40 chr5 9027890 9028042 -190602108 - L3 LINE CR1 -715 862 704 192 323 15 0 chr5 9028163 9028228 -190601922 - MIR3 SINE MIR -42 166 101 186 43 0 0 chr5 9028368 9028391 -190601759 + (A)n Simple_repeat Simple_repeat 1 23 0 217 242 91 0 chr5 9028722 9028788 -190601362 - L2 LINE L2 -526 2788 2717 1134 258 56 12 chr5 9028920 9029330 -190600820 + MLT1H1 LTR MaLR 134 554 -1 350 336 69 42 chr5 9029538 9029611 -190600539 + L2 LINE L2 2283 2353 -961 2077 122 84 29 chr5 9029611 9029954 -190600196 - THE1B LTR MaLR -2 362 1 350 336 69 42 chr5 9029954 9030142 -190600008 + L2 LINE L2 2353 2551 -763 21 0 0 0 chr5 9031031 9031052 -190599098 + AT_rich Low_complexity Low_complexity 1 21 0 651 291 36 4 chr5 9031077 9031328 -190598822 - MIR SINE MIR -1 261 3 335 213 0 27 chr5 9031637 9031712 -190598438 + Tigger5 DNA MER2_type 20 92 -2231 446 167 0 0 chr5 9031761 9031839 -190598311 + Tigger5 DNA MER2_type 2246 2323 0 376 262 56 0 chr5 9031857 9031964 -190598186 - MIR SINE MIR -148 114 2 352 277 132 76 chr5 9033857 9034358 -190595792 - L1ME4a LINE L1 0 6121 5593 180 77 0 0 chr5 9034597 9034623 -190595527 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 296 178 40 53 chr5 9035207 9035359 -190594791 + (TTATA)n Simple_repeat Simple_repeat 5 154 0 216 97 0 0 chr5 9035376 9035407 -190594743 + (TG)n Simple_repeat Simple_repeat 2 32 0 1965 267 112 48 chr5 9035423 9037906 -190592244 - L1MCa LINE L1 -3403 3538 620 2533 175 24 0 chr5 9037906 9038328 -190591822 - MSTB1 LTR MaLR 0 432 1 1965 267 112 48 chr5 9038328 9038929 -190591221 - L1MCa LINE L1 -6321 620 59 443 274 50 11 chr5 9039522 9039701 -190590449 - LTR33 LTR ERVL -2 519 334 248 305 92 0 chr5 9039797 9039938 -190590212 - LTR33 LTR ERVL -355 166 13 2170 118 0 0 chr5 9040126 9040422 -190589728 - AluSq SINE Alu -16 297 2 410 297 101 9 chr5 9040424 9040643 -190589507 - L2 LINE L2 -775 2539 2301 22 35 0 0 chr5 9043715 9043744 -190586406 + AT_rich Low_complexity Low_complexity 1 29 0 2711 139 13 13 chr5 9044192 9044644 -190585506 - L1MA2 LINE L1 0 6304 5853 6172 99 17 1 chr5 9044644 9045514 -190584636 + L1PA13 LINE L1 5279 6162 -1 3659 150 39 33 chr5 9045522 9045998 -190584152 - L1MA2 LINE L1 -447 5858 5387 2361 90 0 3 chr5 9045998 9046309 -190583841 - AluY SINE Alu -1 310 1 3659 150 39 33 chr5 9046309 9046519 -190583631 - L1MA2 LINE L1 -918 5387 5163 216 0 0 0 chr5 9046519 9046543 -190583607 + (TG)n Simple_repeat Simple_repeat 1 24 0 3659 150 39 33 chr5 9046543 9046716 -190583434 - L1MA2 LINE L1 -1142 5163 4993 1322 144 22 51 chr5 9046872 9047226 -190582924 - L1M1 LINE L1 -743 5403 5108 4481 132 28 74 chr5 9047226 9048056 -190582094 + L1MA4 LINE L1 5497 6292 -8 740 294 167 27 chr5 9049289 9049727 -190580423 + L2 LINE L2 1354 1852 -1462 288 250 0 54 chr5 9049801 9049893 -190580257 + L2 LINE L2 1867 1953 -1361 260 314 20 20 chr5 9050269 9050422 -190579728 + L1ME LINE L1 5526 5678 -443 21 36 0 0 chr5 9050698 9050726 -190579424 + AT_rich Low_complexity Low_complexity 1 28 0 215 353 147 0 chr5 9052188 9052304 -190577846 + L2 LINE L2 3114 3246 -26 2039 142 31 0 chr5 9052803 9053127 -190577023 + THE1B LTR MaLR 1 334 -30 1368 113 26 0 chr5 9054122 9054316 -190575834 + THE1B LTR MaLR 133 331 -33 327 191 0 0 chr5 9055248 9055316 -190574834 + (CA)n Simple_repeat Simple_repeat 2 69 0 980 106 0 14 chr5 9055872 9056014 -190574136 - AluSg/x SINE Alu -17 293 154 22 56 0 0 chr5 9056345 9056381 -190573769 + AT_rich Low_complexity Low_complexity 1 36 0 274 361 57 15 chr5 9058815 9059078 -190571072 + L2 LINE L2 2623 2896 -418 340 347 15 10 chr5 9061094 9061293 -190568857 + MIR SINE MIR 63 262 0 2621 65 0 0 chr5 9062855 9063163 -190566987 - AluY SINE Alu -3 308 1 902 260 13 0 chr5 9063168 9063395 -190566755 + L1ME3A LINE L1 5522 5751 -419 810 116 7 87 chr5 9063495 9063633 -190566517 - AluSc SINE Alu -161 148 22 372 310 9 0 chr5 9063730 9063846 -190566304 + L1ME3A LINE L1 6049 6165 -5 642 60 0 0 chr5 9064006 9064089 -190566061 + (TA)n Simple_repeat Simple_repeat 2 84 0 232 244 89 0 chr5 9064258 9064348 -190565802 + L1M4c LINE L1 2382 2479 -3905 667 178 6 57 chr5 9064378 9064535 -190565615 - L1MC3 LINE L1 -875 6910 6762 2627 208 15 4 chr5 9064570 9065105 -190565045 + L1MC3 LINE L1 6994 7534 -251 365 298 67 6 chr5 9065107 9065285 -190564865 + L1MC4a LINE L1 6591 6779 -1029 24 53 0 0 chr5 9065472 9065510 -190564640 + AT_rich Low_complexity Low_complexity 1 38 0 293 308 47 0 chr5 9067418 9067525 -190562625 + L2 LINE L2 3201 3312 -1 219 316 60 8 chr5 9067890 9068016 -190562134 + MIR SINE MIR 11 143 -66 21 0 0 0 chr5 9068644 9068665 -190561485 + AT_rich Low_complexity Low_complexity 1 21 0 443 154 22 0 chr5 9068980 9069071 -190561079 - AluJb SINE Alu 0 312 220 * 720 208 0 0 chr5 9069065 9069185 -190560965 - AluJb SINE Alu -191 121 2 24 0 0 0 chr5 9069199 9069223 -190560927 + AT_rich Low_complexity Low_complexity 1 24 0 1906 149 0 36 chr5 9069253 9069561 -190560589 - AluJb SINE Alu -15 297 1 23 33 0 0 chr5 9070325 9070355 -190559795 + AT_rich Low_complexity Low_complexity 1 30 0 2068 44 52 0 chr5 9071167 9071417 -190558733 - AluY SINE Alu -1 310 48 1538 22 0 16 chr5 9071614 9071799 -190558351 + AluYa5 SINE Alu 120 301 -10 226 237 10 82 chr5 9072168 9072265 -190557885 + MIR SINE MIR 52 141 -121 234 114 45 0 chr5 9072645 9072689 -190557461 - MLT1J2 LTR MaLR -34 416 371 345 318 7 39 chr5 9072879 9073033 -190557117 - MLT1H LTR MaLR -307 242 94 386 256 22 0 chr5 9074817 9074907 -190555243 - MER5A DNA MER1_type -85 104 13 258 336 99 15 chr5 9075448 9075579 -190554571 - L2 LINE L2 -1 3312 3171 28 29 0 0 chr5 9075586 9075621 -190554529 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 9075742 9075775 -190554375 + (CA)n Simple_repeat Simple_repeat 2 34 0 321 68 0 0 chr5 9075775 9075819 -190554331 + (GA)n Simple_repeat Simple_repeat 1 44 0 1439 175 61 61 chr5 9077200 9077594 -190552556 + MLT1C LTR MaLR 1 394 -73 309 261 169 72 chr5 9078279 9078528 -190551622 - L2 LINE L2 -11 3302 3030 328 238 61 62 chr5 9078694 9078884 -190551266 + L1MC4a LINE L1 5748 5939 -182 259 320 10 10 chr5 9079160 9079257 -190550893 - MLT1I LTR MaLR -309 100 4 187 336 133 8 chr5 9081401 9081529 -190548621 + L2 LINE L2 3126 3269 -3 2264 200 90 24 chr5 9082221 9082796 -190547354 - L1MB5 LINE L1 -8 6166 5554 21 36 0 0 chr5 9083869 9083897 -190546253 + AT_rich Low_complexity Low_complexity 1 28 0 655 186 9 0 chr5 9084706 9084937 -190545213 - L1MA9 LINE L1 -22 6290 5962 2331 53 0 86 chr5 9085178 9085516 -190544634 + AluY SINE Alu 1 309 -2 1699 271 52 17 chr5 9086790 9087476 -190542674 - L1MC4 LINE L1 -1 8041 7252 1046 225 166 103 chr5 9087477 9087557 -190542593 - L1MC4 LINE L1 -957 7085 7011 208 0 0 0 chr5 9087557 9087580 -190542570 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2000 124 3 17 chr5 9087580 9087870 -190542280 - AluSx SINE Alu -1 308 1 1046 225 166 103 chr5 9087870 9088219 -190541931 - L1MC4 LINE L1 -1031 7011 6606 192 40 0 0 chr5 9088219 9088244 -190541906 + (TG)n Simple_repeat Simple_repeat 2 26 0 1046 225 166 103 chr5 9088244 9088402 -190541748 - L1MC4 LINE L1 -1436 6606 6459 214 241 0 35 chr5 9088847 9088876 -190541274 + GA-rich Low_complexity Low_complexity 2 30 -27 1680 164 43 0 chr5 9088876 9089181 -190540969 + L1MA4 LINE L1 5983 6300 0 214 241 0 35 chr5 9089181 9089209 -190540941 + GA-rich Low_complexity Low_complexity 30 57 0 200 276 69 52 chr5 9089577 9089635 -190540515 + L2 LINE L2 3148 3206 -66 232 328 47 16 chr5 9091748 9091876 -190538274 + MIR SINE MIR 129 260 -2 967 282 103 3 chr5 9092229 9092616 -190537534 + LTR16A LTR ERVL 25 450 0 230 264 99 33 chr5 9092616 9092707 -190537443 + MIR SINE MIR 81 177 -85 638 199 0 73 chr5 9092980 9093116 -190537034 - FRAM SINE Alu -43 133 8 389 280 143 32 chr5 9093339 9093528 -190536622 + L2 LINE L2 2882 3091 -181 1172 231 46 53 chr5 9093995 9094406 -190535744 - MLT1C LTR MaLR -1 466 59 189 0 0 0 chr5 9095277 9095298 -190534852 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 251 238 50 38 chr5 9095506 9095586 -190534564 - MIR SINE MIR 0 262 182 644 143 6 34 chr5 9095597 9095772 -190534378 + (TA)n Simple_repeat Simple_repeat 1 170 0 560 309 133 17 chr5 9095886 9096429 -190533721 - L1M4 LINE L1 -2752 3394 2789 1969 114 0 7 chr5 9097676 9097949 -190532201 - AluSq SINE Alu -8 305 35 182 391 0 17 chr5 9098330 9098445 -190531705 + L3b LINE CR1 1119 1231 -352 678 332 26 142 chr5 9099345 9099571 -190530579 + L1PA7 LINE L1 5867 6066 -88 184 186 0 23 chr5 9100740 9100783 -190529367 + L2 LINE L2 3186 3227 -86 486 319 86 9 chr5 9100898 9101130 -190529020 + MIR SINE MIR 10 259 -3 2377 113 3 0 chr5 9101522 9101833 -190528317 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 9102023 9102044 -190528106 + AT_rich Low_complexity Low_complexity 1 21 0 567 272 62 5 chr5 9102326 9102521 -190527629 - MER58A DNA MER1_type 0 224 19 2036 75 30 0 chr5 9102702 9102969 -190527181 + L1PA12 LINE L1 5845 6119 -49 203 396 43 40 chr5 9104101 9104475 -190525675 + L3 LINE CR1 403 777 -800 302 280 167 18 chr5 9104669 9104837 -190525313 - MIR SINE MIR -42 220 28 294 239 14 0 chr5 9105118 9105189 -190524961 + MIR3 SINE MIR 128 199 -9 1084 184 34 5 chr5 9105334 9105541 -190524609 - MLT2C1 LTR ERVL -184 213 1 740 239 54 47 chr5 9105542 9105842 -190524308 - ERVL LTR ERVL -2 5755 5380 26 74 0 0 chr5 9105978 9106032 -190524118 + AT_rich Low_complexity Low_complexity 1 54 0 312 73 455 0 chr5 9106249 9106304 -190523846 + MADE1 DNA Mariner 1 80 0 2416 71 0 16 chr5 9106395 9106703 -190523447 + AluY SINE Alu 1 303 -8 1079 231 30 24 chr5 9106891 9107340 -190522810 - MLT1D LTR MaLR -1 504 4 237 116 47 23 chr5 9107341 9107384 -190522766 - MLT1D LTR MaLR -453 52 9 376 290 75 37 chr5 9107681 9107895 -190522255 - MLT1E LTR MaLR -367 226 5 363 318 99 10 chr5 9108991 9109183 -190520967 - MIR SINE MIR -9 253 45 284 315 56 49 chr5 9109499 9109661 -190520489 + L2 LINE L2 2985 3147 -125 229 262 29 10 chr5 9110961 9111064 -190519086 + (TA)n Simple_repeat Simple_repeat 2 106 0 570 256 73 55 chr5 9111805 9112094 -190518056 - MLT1I LTR MaLR -2 407 114 184 318 78 61 chr5 9113523 9113768 -190516382 + L2 LINE L2 2864 3112 -160 228 135 0 0 chr5 9113768 9113805 -190516345 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 284 351 38 0 chr5 9114055 9114186 -190515964 - MIR SINE MIR -71 191 56 299 317 10 0 chr5 9115924 9116028 -190514122 + L1ME2 LINE L1 6038 6142 -22 243 158 0 0 chr5 9117988 9118026 -190512124 - L2 LINE L2 0 3272 3235 273 29 0 0 chr5 9118586 9118620 -190511530 + (CA)n Simple_repeat Simple_repeat 1 34 0 286 204 0 0 chr5 9118683 9118694 -190511456 + MER3 DNA MER1_type 37 47 -162 384 244 57 16 chr5 9118694 9118817 -190511333 - MER3 DNA MER1_type 0 209 82 254 281 21 21 chr5 9118838 9118934 -190511216 - L1MC/D LINE L1 -2031 5777 5682 1683 173 62 7 chr5 9169223 9169530 -190460620 - MER58B DNA MER1_type -17 324 1 202 200 25 50 chr5 9170013 9170093 -190460057 + GA-rich Low_complexity Low_complexity 2 79 0 241 132 19 19 chr5 9170280 9170333 -190459817 + GA-rich Low_complexity Low_complexity 4 56 0 279 274 68 35 chr5 9172541 9172749 -190457401 - L1MC/D LINE L1 -734 5450 5256 295 277 70 78 chr5 9174405 9174647 -190455503 - L2 LINE L2 -4 3309 3070 684 309 85 32 chr5 9174757 9175132 -190455018 - L2 LINE L2 -473 2841 2447 258 240 53 13 chr5 9175364 9175439 -190454711 + L2 LINE L2 3159 3236 -77 1914 178 15 15 chr5 9176387 9176729 -190453421 + MER2 DNA MER2_type 2 343 -1 21 57 0 0 chr5 9176801 9176836 -190453314 + AT_rich Low_complexity Low_complexity 1 35 0 277 224 0 0 chr5 9177408 9177466 -190452684 + MIR SINE MIR 184 241 -21 214 255 20 0 chr5 9177482 9177533 -190452617 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1840 153 0 33 chr5 9178243 9178550 -190451600 + AluJb SINE Alu 1 297 -15 265 211 28 0 chr5 9178755 9178826 -190451324 + L1MA7 LINE L1 6213 6285 -6 317 351 45 8 chr5 9179163 9179297 -190450853 + MER5A DNA MER1_type 3 141 -48 556 258 137 61 chr5 9179428 9179757 -190450393 + MLT1I LTR MaLR 52 405 -4 186 338 127 53 chr5 9180015 9180707 -190449443 - L2 LINE L2 -711 2603 1861 1251 235 101 38 chr5 9182572 9183015 -190447135 - MLT1C LTR MaLR -1 466 1 318 275 85 17 chr5 9183587 9183828 -190446322 - MLT1L LTR MaLR 0 597 248 246 62 0 0 chr5 9184531 9184563 -190445587 + (T)n Simple_repeat Simple_repeat 1 32 0 13093 17 0 13 chr5 9184564 9186904 -190443246 - L1HS LINE L1 0 6155 3833 605 213 25 0 chr5 9186903 9187025 -190443125 + L1ME3A LINE L1 6038 6162 -8 * 1956 145 21 0 chr5 9189072 9189361 -190440789 + AluSx SINE Alu 1 295 -17 659 209 214 15 chr5 9189381 9189577 -190440573 - MER106A DNA MER1_type 0 236 2 347 240 24 72 chr5 9190100 9190225 -190439925 + L2 LINE L2 3195 3313 0 380 291 162 50 chr5 9190890 9191475 -190438675 - L2 LINE L2 -1036 2278 1628 449 211 106 33 chr5 9193130 9193310 -190436840 - LTR16A1 LTR ERVL 0 457 265 2287 59 0 53 chr5 9193507 9193811 -190436339 + AluY SINE Alu 1 288 -23 1105 32 0 0 chr5 9193816 9193942 -190436208 + L1PA5 LINE L1 6028 6153 -1 294 221 57 150 chr5 9194191 9194331 -190435819 - MER21B LTR ERV1 -187 676 550 443 291 53 89 chr5 9194357 9194687 -190435463 - MER21B LTR ERV1 -279 326 6 874 266 89 29 chr5 9195357 9195650 -190434500 + LTR33 LTR ERVL 16 339 -182 2429 107 133 13 chr5 9195650 9196032 -190434118 - MSTA LTR MaLR 0 428 1 874 266 89 29 chr5 9196032 9196118 -190434032 + LTR33 LTR ERVL 339 418 -103 28 48 0 0 chr5 9196329 9196371 -190433779 + AT_rich Low_complexity Low_complexity 1 42 0 1750 222 79 35 chr5 9196429 9196937 -190433213 + MER119 DNA MER1_type 54 583 0 1171 127 31 75 chr5 9197504 9197732 -190432418 + MLT1B LTR MaLR 1 218 -172 870 207 59 104 chr5 9197731 9198100 -190432050 + MLT1A1 LTR MaLR 10 428 0 * 839 174 47 0 chr5 9198100 9198243 -190431907 + MLT1B LTR MaLR 218 367 -23 280 300 47 33 chr5 9201875 9202025 -190428125 - L3 LINE CR1 -302 1275 1124 183 250 36 18 chr5 9202322 9202378 -190427772 + MIR SINE MIR 96 152 -110 22 0 0 0 chr5 9203036 9203058 -190427092 + AT_rich Low_complexity Low_complexity 1 22 0 202 208 30 79 chr5 9204569 9204670 -190425480 + (CA)n Simple_repeat Simple_repeat 1 96 0 194 291 89 25 chr5 9204785 9204864 -190425286 + MIR3 SINE MIR 110 193 -15 351 264 82 0 chr5 9205760 9205870 -190424280 + L1ME4a LINE L1 5513 5631 -490 406 289 104 66 chr5 9205874 9206327 -190423823 + L1ME4a LINE L1 5651 6120 -1 511 255 156 45 chr5 9206511 9206754 -190423396 - MLT1H LTR MaLR -241 308 39 2535 137 40 28 chr5 9207229 9207653 -190422497 - MSTB1 LTR MaLR 0 432 4 397 213 12 0 chr5 9208556 9208636 -190421514 - L2 LINE L2 -1 3312 3232 1327 220 19 38 chr5 9211255 9211559 -190418591 - MLT1D LTR MaLR 0 505 206 1643 159 17 30 chr5 9211559 9211861 -190418289 - AluSx SINE Alu -14 298 1 1327 220 19 38 chr5 9211861 9211874 -190418276 - MLT1D LTR MaLR -299 206 194 1163 215 12 32 chr5 9211864 9212110 -190418040 - MLT1D LTR MaLR -263 242 2 * 214 234 168 28 chr5 9212117 9212224 -190417926 - MIR SINE MIR -70 192 71 2454 71 0 16 chr5 9213918 9214226 -190415924 + AluSx SINE Alu 1 303 -9 1710 312 114 23 chr5 9215488 9216598 -190413552 - L2 LINE L2 -30 3283 2012 4584 190 76 8 chr5 9216598 9217440 -190412710 + MER54A LTR ERVL 3 901 0 1710 312 114 23 chr5 9217440 9217739 -190412411 - L2 LINE L2 -1301 2012 1742 1796 106 152 8 chr5 9217958 9218222 -190411928 + AluSx SINE Alu 1 302 0 27 49 0 0 chr5 9218502 9218543 -190411607 + AT_rich Low_complexity Low_complexity 1 41 0 2343 125 46 8 chr5 9219571 9219922 -190410228 + THE1B LTR MaLR 1 364 0 5490 133 16 10 chr5 9222352 9223390 -190406760 - L1PA16 LINE L1 -70 6096 5053 2464 126 36 0 chr5 9223390 9223779 -190406371 + L1PA15-16 LINE L1 2347 2749 -4100 22 0 0 0 chr5 9223791 9223813 -190406337 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 9224723 9224754 -190405396 + AT_rich Low_complexity Low_complexity 1 31 0 25 65 0 0 chr5 9224809 9224855 -190405295 + AT_rich Low_complexity Low_complexity 1 46 0 424 306 32 19 chr5 9225820 9225977 -190404173 + MIR SINE MIR 17 175 -87 444 334 50 21 chr5 9226591 9226929 -190403221 + HAL1 LINE L1 1408 1755 -752 185 164 0 18 chr5 9227120 9227175 -190402975 + (TA)n Simple_repeat Simple_repeat 1 54 0 301 231 15 0 chr5 9228048 9228113 -190402037 + MIR SINE MIR 104 169 -93 271 318 12 0 chr5 9228803 9228888 -190401262 + MIR3 SINE MIR 112 197 -11 1241 272 139 18 chr5 9230380 9231022 -190399128 + L2 LINE L2 2095 2826 -488 291 71 0 0 chr5 9231022 9231064 -190399086 + (CA)n Simple_repeat Simple_repeat 1 42 0 1241 272 139 18 chr5 9231064 9231102 -190399048 + L2 LINE L2 2826 2858 -456 2634 79 18 147 chr5 9232050 9232559 -190397591 - MLT2A1 LTR ERVL 0 444 2 246 62 0 0 chr5 9232599 9232631 -190397519 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2004 126 0 4 chr5 9232631 9232909 -190397241 - AluSc SINE Alu -32 277 1 201 255 0 20 chr5 9233730 9233781 -190396369 + GA-rich Low_complexity Low_complexity 3 52 0 1639 68 5 14 chr5 9234220 9234427 -190395723 + AluY SINE Alu 90 294 -17 537 272 380 19 chr5 9234702 9235389 -190394761 - L2 LINE L2 -920 2394 1460 1920 199 119 19 chr5 9236071 9236543 -190393607 - MLT2B1 LTR ERVL 0 520 2 2325 109 3 0 chr5 9236849 9237161 -190392989 - AluSq SINE Alu 0 313 1 1865 137 70 23 chr5 9237679 9238022 -190392128 + MER46B DNA MER2_type 3 236 0 315 0 0 0 chr5 9239207 9239242 -190390908 + (TG)n Simple_repeat Simple_repeat 2 36 0 877 141 82 0 chr5 9239259 9239394 -190390756 - AluSg/x SINE Alu -27 285 140 1446 217 113 29 chr5 9239477 9239859 -190390291 - MLT2D LTR ERVL 0 414 1 1297 229 4 0 chr5 9240748 9241019 -190389131 + L1PA16 LINE L1 5895 6166 0 549 99 0 0 chr5 9241022 9241103 -190389047 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 2369 168 49 35 chr5 9241235 9241687 -190388463 - MLT2C2 LTR ERVL -6 458 1 263 208 179 1 chr5 9241937 9242169 -190387981 - Charlie7 DNA MER1_type -8 2604 2320 440 219 17 0 chr5 9242184 9242303 -190387847 + L1M4c LINE L1 2296 2416 -3968 1003 249 179 18 chr5 9242304 9242801 -190387349 - Charlie7 DNA MER1_type -298 2314 1738 485 247 0 0 chr5 9242800 9242893 -190387257 - MLT1D LTR MaLR -411 94 2 * 5377 68 36 21 chr5 9245270 9246025 -190384125 + MER4E LTR ERV1 1 766 0 2658 58 0 0 chr5 9246631 9246940 -190383210 - AluY SINE Alu -2 309 1 2264 64 0 0 chr5 9247104 9247370 -190382780 - AluY SINE Alu -45 266 1 1781 125 133 77 chr5 9248916 9249308 -190380842 + MLT2D LTR ERVL 1 414 0 493 219 144 31 chr5 9250320 9250480 -190379670 - MER112 DNA MER1_type -2 258 81 2180 135 37 6 chr5 9251392 9251719 -190378431 - MER1B DNA MER1_type -1 338 2 301 252 42 84 chr5 9252672 9252815 -190377335 - MIR3 SINE MIR -51 157 21 547 213 0 0 chr5 9253207 9253301 -190376849 + MER58B DNA MER1_type 3 96 -245 992 151 0 41 chr5 9253302 9253474 -190376676 - AluJb SINE Alu -19 293 129 910 220 33 19 chr5 9253491 9253705 -190376445 + MER58B DNA MER1_type 125 341 0 1567 164 3 66 chr5 9253923 9254071 -190376079 + AluJb SINE Alu 1 124 -188 297 0 0 0 chr5 9254071 9254104 -190376046 + (TA)n Simple_repeat Simple_repeat 2 34 0 1567 164 3 66 chr5 9254104 9254282 -190375868 + AluJb SINE Alu 124 312 0 370 289 16 0 chr5 9254327 9254455 -190375695 - MER20 DNA MER1_type -4 215 86 2567 61 0 10 chr5 9255693 9256005 -190374145 + AluY SINE Alu 1 309 -2 2336 96 0 3 chr5 9257806 9258120 -190372030 + AluSq SINE Alu 1 313 0 643 251 86 67 chr5 9258216 9258647 -190371503 + MLT1H LTR MaLR 107 545 -4 202 143 41 0 chr5 9259333 9259382 -190370768 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 238 302 191 0 chr5 9259531 9259657 -190370493 - MIR3 SINE MIR -23 185 36 226 255 53 75 chr5 9259755 9259849 -190370301 - L2 LINE L2 -4 3268 3177 239 333 139 19 chr5 9260095 9260563 -190369587 - L2 LINE L2 -427 2887 2364 401 246 215 26 chr5 9260605 9260800 -190369350 + MLT1J LTR MaLR 1 232 -279 668 207 8 139 chr5 9260940 9261191 -190368959 + MER20 DNA MER1_type 2 219 0 458 337 15 10 chr5 9262801 9263006 -190367144 + MIR SINE MIR 51 256 -6 587 294 95 5 chr5 9264256 9264467 -190365683 - MLT1I LTR MaLR -81 328 99 275 254 30 0 chr5 9268223 9268290 -190361860 - LTR16C LTR ERVL -9 482 414 2311 114 0 3 chr5 9269067 9269375 -190360775 - AluSx SINE Alu -5 307 1 225 154 0 0 chr5 9270188 9270227 -190359923 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr5 9271291 9271313 -190358837 + AT_rich Low_complexity Low_complexity 1 22 0 2306 111 141 5 chr5 9272542 9272919 -190357231 - MSTA LTR MaLR 0 428 1 300 70 0 0 chr5 9323937 9323980 -190306170 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2390 45 10 3 chr5 9323988 9324280 -190305870 - AluY SINE Alu -17 294 1 1501 217 15 6 chr5 9324289 9324616 -190305534 - L1MB3 LINE L1 -1 6182 5853 241 354 104 11 chr5 9325581 9325841 -190304309 + L3b LINE CR1 1103 1386 -197 231 152 0 0 chr5 9326820 9326866 -190303284 + GA-rich Low_complexity Low_complexity 1 46 0 2348 96 0 3 chr5 9328637 9328939 -190301211 + AluY SINE Alu 1 301 -10 325 283 108 35 chr5 9329959 9330507 -190299643 + L1ME4a LINE L1 5530 6117 -4 358 301 10 10 chr5 9330571 9330674 -190299476 - MIR SINE MIR -50 212 110 641 167 118 73 chr5 9331690 9331894 -190298256 - MER5C DNA MER1_type -1 323 111 264 307 88 29 chr5 9332971 9333108 -190297042 - MIR SINE MIR -92 170 26 1076 201 5 33 chr5 9334264 9334478 -190295672 - MER20 DNA MER1_type -6 213 6 23 0 0 0 chr5 9334911 9334934 -190295216 + AT_rich Low_complexity Low_complexity 1 23 0 1519 86 16 67 chr5 9335744 9335892 -190294258 - L1MA1 LINE L1 -7 6295 6141 1903 159 10 3 chr5 9335892 9336064 -190294086 - AluSx SINE Alu -9 303 134 321 26 0 0 chr5 9336064 9336102 -190294048 + (TG)n Simple_repeat Simple_repeat 1 38 0 276 100 0 0 chr5 9336105 9336145 -190294005 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 1903 159 10 3 chr5 9336145 9336269 -190293881 - AluSx SINE Alu -179 133 1 1519 86 16 67 chr5 9336269 9336286 -190293864 - L1MA1 LINE L1 -161 6141 6125 2114 127 0 0 chr5 9336286 9336577 -190293573 - AluSx SINE Alu -19 293 3 1519 86 16 67 chr5 9336577 9336665 -190293485 - L1MA1 LINE L1 -177 6125 6054 207 0 0 0 chr5 9337082 9337105 -190293045 + (A)n Simple_repeat Simple_repeat 1 23 0 2163 198 58 81 chr5 9337436 9338003 -190292147 + MLT2B3 LTR ERVL 1 554 0 308 169 68 0 chr5 9338238 9338297 -190291853 + L2 LINE L2 3250 3312 -1 290 87 22 0 chr5 9341999 9342045 -190288105 + (GA)n Simple_repeat Simple_repeat 1 47 0 1844 240 33 7 chr5 9342100 9342550 -190287600 + MLT1C LTR MaLR 6 467 0 394 323 150 18 chr5 9344080 9344306 -190285844 - MIR SINE MIR 0 262 7 498 267 43 74 chr5 9348079 9348337 -190281813 - MLT1C LTR MaLR -213 254 5 376 118 40 0 chr5 9348458 9348534 -190281616 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 2030 128 0 13 chr5 9348989 9349302 -190280848 - AluSx SINE Alu -3 309 1 953 201 106 82 chr5 9351437 9352071 -190278079 - MER4C LTR ERV1 0 465 10 2122 86 7 23 chr5 9352912 9353216 -190276934 + AluSq SINE Alu 1 299 -14 245 382 45 6 chr5 9353516 9353673 -190276477 + MIR SINE MIR 20 182 -80 1850 142 0 13 chr5 9353972 9354274 -190275876 + AluSg SINE Alu 1 298 -12 208 271 0 0 chr5 9356023 9356071 -190274079 + MIR SINE MIR 194 241 -21 1055 186 29 5 chr5 9356518 9356869 -190273281 - Tigger1 DNA MER2_type -5 2413 2 391 262 58 0 chr5 9358290 9358393 -190271757 + L2 LINE L2 3137 3245 -27 2276 61 40 0 chr5 9359396 9359692 -190270458 - AluY SINE Alu -3 308 1 298 366 6 19 chr5 9360514 9360675 -190269475 - MER5B DNA MER1_type -2 176 18 653 236 61 30 chr5 9360910 9361112 -190269038 + MIR SINE MIR 50 262 0 2159 105 0 0 chr5 9361207 9361501 -190268649 + AluSg SINE Alu 1 294 -16 1541 192 0 3 chr5 9364442 9364728 -190265422 + AluJo SINE Alu 1 285 -27 21 0 0 0 chr5 9364728 9364749 -190265401 + AT_rich Low_complexity Low_complexity 1 21 0 239 224 60 15 chr5 9364749 9364816 -190265334 - L1MC4 LINE L1 -1339 6703 6634 312 27 0 0 chr5 9364863 9364900 -190265250 + (GA)n Simple_repeat Simple_repeat 1 37 0 1686 154 3 20 chr5 9365859 9366151 -190263999 + AluJb SINE Alu 1 287 -25 180 0 0 0 chr5 9366283 9366303 -190263847 + (GA)n Simple_repeat Simple_repeat 1 20 0 905 189 13 44 chr5 9367177 9367234 -190262916 + MER96B DNA MER1_type? 190 247 -170 1237 231 12 82 chr5 9367234 9367636 -190262514 - MLT1A2 LTR MaLR 0 374 1 905 189 13 44 chr5 9367636 9367805 -190262345 + MER96B DNA MER1_type? 247 409 -8 238 293 102 32 chr5 9368724 9368881 -190261269 + MER5A DNA MER1_type 8 175 -14 501 274 9 50 chr5 9369316 9369496 -190260654 - MIR SINE MIR -51 157 5 242 322 132 0 chr5 9369816 9369937 -190260213 + MIR SINE MIR 112 248 -14 297 366 6 0 chr5 9371272 9371444 -190258706 + (TTGG)n Simple_repeat Simple_repeat 2 174 0 278 292 42 0 chr5 9371538 9371634 -190258516 + Charlie8 DNA MER1_type 184 283 -2134 2326 73 3 0 chr5 9372046 9372346 -190257804 + AluY SINE Alu 1 301 -10 30 69 0 0 chr5 9372375 9372433 -190257717 + AT_rich Low_complexity Low_complexity 1 58 0 597 246 18 53 chr5 9373389 9373451 -190256699 - MIR SINE MIR -48 214 151 1965 123 0 7 chr5 9373451 9373753 -190256397 + AluSx SINE Alu 1 300 -12 597 246 18 53 chr5 9373753 9373910 -190256240 - MIR SINE MIR -111 151 1 249 333 0 0 chr5 9374064 9374127 -190256023 + L2 LINE L2 3205 3267 -5 857 198 8 88 chr5 9375131 9375369 -190254781 + MER20 DNA MER1_type 1 219 0 449 331 43 0 chr5 9376014 9376153 -190253997 - L2 LINE L2 -6 3266 3122 2265 157 13 18 chr5 9376635 9377023 -190253127 - MLT1B LTR MaLR -2 388 3 316 280 99 49 chr5 9377027 9377270 -190252880 - LTR33 LTR ERVL -161 360 106 442 193 9 55 chr5 9378118 9378227 -190251923 - MER104 DNA Tc2 -76 104 1 1955 139 13 3 chr5 9378370 9378679 -190251471 + AluJb SINE Alu 1 312 0 1444 124 0 0 chr5 9379170 9379379 -190250771 - AluSg/x SINE Alu 0 312 104 542 125 125 0 chr5 9379401 9379489 -190250661 - AluSq/x SINE Alu -180 132 34 3425 92 11 0 chr5 9379695 9380143 -190250007 - MLT2A2 LTR ERVL 0 453 1 1943 145 0 3 chr5 9381036 9381340 -190248810 + AluJb SINE Alu 1 303 -9 228 330 34 0 chr5 9382367 9382455 -190247695 - L2 LINE L2 -42 3271 3181 261 163 0 0 chr5 9383527 9383576 -190246574 + (TG)n Simple_repeat Simple_repeat 1 49 0 304 221 85 79 chr5 9387319 9387502 -190242648 - L1MC/D LINE L1 -419 5745 5550 336 319 17 9 chr5 9389121 9389237 -190240913 + MIR SINE MIR 22 138 -124 679 189 16 74 chr5 9389920 9390110 -190240040 + MER5A DNA MER1_type 4 182 -7 205 330 20 60 chr5 9390118 9390218 -190239932 - MIR SINE MIR -59 149 54 1857 147 13 7 chr5 9390625 9390931 -190239219 + AluJo SINE Alu 1 308 -4 229 371 8 8 chr5 9391876 9392000 -190238150 - MIR SINE MIR -119 143 20 2274 83 52 3 chr5 9393323 9393613 -190236537 - AluSx SINE Alu -8 304 1 290 285 17 12 chr5 9394086 9394258 -190235892 + (CATATA)n Simple_repeat Simple_repeat 2 174 0 437 199 4 45 chr5 9394284 9394517 -190235633 + (CATA)n Simple_repeat Simple_repeat 1 242 -1179 6950 118 46 55 chr5 9394517 9395759 -190234391 + Tigger3b DNA MER2_type 1 1231 0 437 199 4 45 chr5 9395759 9395767 -190234383 + (CATA)n Simple_repeat Simple_repeat 242 1421 0 1254 153 38 0 chr5 9395797 9396006 -190234144 - Tigger1 DNA MER2_type 0 2418 2202 1023 153 0 6 chr5 9395995 9396152 -190233998 - Tigger1 DNA MER2_type -2261 157 2 * 2051 174 11 6 chr5 9396665 9397028 -190233122 - MLT1A1 LTR MaLR 0 365 1 1989 222 80 34 chr5 9397190 9397806 -190232344 - LTR48B LTR ERV1 0 644 1 196 151 19 19 chr5 9397901 9397954 -190232196 + (TA)n Simple_repeat Simple_repeat 2 54 0 2358 118 30 28 chr5 9399754 9400117 -190230033 - THE1B LTR MaLR 0 364 1 1821 183 113 26 chr5 9401488 9401791 -190228359 + MLT1C LTR MaLR 9 359 -108 6261 90 37 3 chr5 9401791 9402821 -190227329 + L1PA11 LINE L1 5112 6173 -1 1821 183 113 26 chr5 9402821 9402933 -190227217 + MLT1C LTR MaLR 359 460 -7 504 271 129 78 chr5 9403187 9403560 -190226590 + MLT1J2 LTR MaLR 1 392 -58 772 247 86 0 chr5 9403591 9403765 -190226385 + MER63A DNA MER1_type 18 206 -4 460 299 64 5 chr5 9405246 9405450 -190224700 - L2 LINE L2 0 3313 3098 1990 132 54 40 chr5 9405762 9406132 -190224018 - THE1C LTR MaLR 0 375 1 205 301 206 19 chr5 9406882 9407091 -190223059 - MIR SINE MIR 0 262 15 2154 164 3 6 chr5 9407147 9407500 -190222650 - MLT1A1 LTR MaLR -13 352 1 1500 163 16 16 chr5 9407587 9407839 -190222311 - AluSx SINE Alu -25 287 36 876 221 77 10 chr5 9408268 9408476 -190221674 - MER58A DNA MER1_type 0 224 3 1571 232 13 33 chr5 9409251 9409447 -190220703 - MLT1B LTR MaLR -1 389 203 2493 116 16 8 chr5 9409447 9409819 -190220331 + THE1C LTR MaLR 1 375 0 1571 232 13 33 chr5 9409819 9410019 -190220131 - MLT1B LTR MaLR -187 203 1 187 177 0 51 chr5 9411584 9411663 -190218487 + (CCCG)n Simple_repeat Simple_repeat 2 76 0 208 263 168 0 chr5 9412213 9412308 -190217842 - L2 LINE L2 -23 3290 3180 285 165 0 3 chr5 9412353 9412439 -190217711 - MER3 DNA MER1_type 0 2585 2472 352 236 0 0 chr5 9412443 9412515 -190217635 - MER3 DNA MER1_type -95 114 43 246 293 0 13 chr5 9412602 9412677 -190217473 + L1ME3A LINE L1 6054 6127 -43 2302 120 24 24 chr5 9413907 9414281 -190215869 + THE1C LTR MaLR 2 375 0 256 256 176 24 chr5 9414333 9414458 -190215692 - LTR16C LTR ERVL -32 459 316 1794 86 3 111 chr5 9415112 9415247 -190214903 - MLT2A2 LTR ERVL 0 453 370 2189 93 75 9 chr5 9415247 9415580 -190214570 - THE1A LTR MaLR 0 355 1 1794 86 3 111 chr5 9415580 9415759 -190214391 - MLT2A2 LTR ERVL -83 370 173 562 258 72 70 chr5 9415775 9416291 -190213859 + L1MC5 LINE L1 7308 7824 -137 618 207 133 0 chr5 9416340 9416475 -190213675 - FRAM SINE Alu -9 157 5 1205 246 111 33 chr5 9416740 9417163 -190212987 - LTR65 LTR ERV1 -47 622 167 183 114 0 0 chr5 9417575 9417610 -190212540 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr5 9418019 9418047 -190212103 + AT_rich Low_complexity Low_complexity 1 28 0 183 274 68 14 chr5 9419323 9419396 -190210754 - MIR3 SINE MIR -31 177 101 245 243 40 0 chr5 9419435 9419509 -190210641 - MIR SINE MIR -6 256 180 29 0 0 0 chr5 9420068 9420097 -190210053 + AT_rich Low_complexity Low_complexity 1 29 0 488 259 7 34 chr5 9420434 9420581 -190209569 + L2 LINE L2 3167 3309 -4 944 246 89 32 chr5 9421590 9421903 -190208247 + MER93a LTR ERV1 70 400 -2 28 61 0 0 chr5 9422108 9422157 -190207993 + AT_rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr5 9422231 9422260 -190207890 + AT_rich Low_complexity Low_complexity 1 29 0 946 132 111 16 chr5 9423096 9423286 -190206864 + MER3 DNA MER1_type 1 208 -1 446 313 55 11 chr5 9423332 9423514 -190206636 - MIR SINE MIR -57 205 16 1438 170 4 0 chr5 9424209 9424444 -190205706 + MER46A DNA MER2_type 1 236 0 1030 144 76 79 chr5 9424548 9424663 -190205487 + L1MA8 LINE L1 6026 6140 -151 2259 109 3 3 chr5 9424663 9424975 -190205175 - AluSq SINE Alu 0 313 2 1030 144 76 79 chr5 9424975 9425140 -190205010 + L1MA8 LINE L1 6140 6285 -6 30 45 0 0 chr5 9425169 9425213 -190204937 + AT_rich Low_complexity Low_complexity 1 44 0 531 317 93 21 chr5 9425376 9425996 -190204154 + L1MC4a LINE L1 5298 5575 -725 207 0 0 0 chr5 9429026 9429049 -190201101 + (A)n Simple_repeat Simple_repeat 1 23 0 407 221 99 23 chr5 9429186 9429317 -190200833 - MIR SINE MIR -104 158 18 187 305 34 0 chr5 9430715 9430774 -190199376 - L2 LINE L2 0 3272 3212 181 319 115 18 chr5 9431243 9431356 -190198794 - MIR SINE MIR -98 164 41 213 132 26 0 chr5 9434459 9434497 -190195653 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 617 239 17 33 chr5 9434767 9434947 -190195203 - MER5B DNA MER1_type -1 177 1 198 0 0 0 chr5 9435414 9435436 -190194714 + (T)n Simple_repeat Simple_repeat 1 22 0 718 223 217 0 chr5 9435539 9435723 -190194427 - MER58A DNA MER1_type 0 224 1 637 297 29 21 chr5 9437459 9437698 -190192452 + MIR SINE MIR 16 256 -6 22 35 0 0 chr5 9438191 9438220 -190191930 + AT_rich Low_complexity Low_complexity 1 29 0 876 211 83 5 chr5 9439232 9439436 -190190714 + MER58A DNA MER1_type 2 221 -3 849 50 0 0 chr5 9440211 9440311 -190189839 + AluSg/x SINE Alu 206 305 -7 534 234 0 8 chr5 9440460 9440584 -190189566 - LTR16A LTR ERVL -53 397 275 1111 347 86 33 chr5 9440630 9441593 -190188557 - ERVL LTR ERVL -2565 3199 2186 723 285 96 17 chr5 9441587 9441996 -190188154 - ERVL LTR ERVL -2917 2079 1619 * 627 310 76 14 chr5 9442000 9442355 -190187795 - ERVL LTR ERVL -4041 955 579 277 304 111 0 chr5 9442724 9442859 -190187291 - ERVL LTR ERVL -4846 150 1 1058 241 101 3 chr5 9442859 9443145 -190187005 - LTR16A LTR ERVL 0 450 137 451 248 9 0 chr5 9443435 9443540 -190186610 - MER3 DNA MER1_type -6 203 98 303 319 30 0 chr5 9444267 9444433 -190185717 + (TTGTG)n Simple_repeat Simple_repeat 4 174 0 186 235 153 35 chr5 9444645 9444719 -190185431 - MIR SINE MIR -65 143 56 1694 153 48 30 chr5 9444719 9445014 -190185136 + AluJb SINE Alu 1 300 -12 984 237 128 22 chr5 9445113 9445425 -190184725 + MER2 DNA MER2_type 1 345 0 27 29 0 0 chr5 9447068 9447102 -190183048 + AT_rich Low_complexity Low_complexity 1 34 0 279 104 0 0 chr5 9448359 9448407 -190181743 + (TA)n Simple_repeat Simple_repeat 2 49 0 306 216 0 0 chr5 9448535 9448609 -190181541 + (TG)n Simple_repeat Simple_repeat 2 75 0 231 87 0 0 chr5 9448609 9448655 -190181495 + LTR66 LTR ERVL 394 439 -171 381 306 86 63 chr5 9448879 9449101 -190181049 - L1MC/D LINE L1 -2019 5789 5563 25 31 0 0 chr5 9449696 9449728 -190180422 + AT_rich Low_complexity Low_complexity 1 32 0 24 67 0 0 chr5 9451392 9451437 -190178713 + AT_rich Low_complexity Low_complexity 1 45 0 207 0 0 0 chr5 9452115 9452138 -190178012 + (T)n Simple_repeat Simple_repeat 1 23 0 189 333 152 0 chr5 9452322 9452421 -190177729 - L2 LINE L2 -4 3268 3155 2469 57 7 0 chr5 9452588 9452885 -190177265 + AluY SINE Alu 3 301 -10 183 184 0 0 chr5 9454918 9454956 -190175194 + CT-rich Low_complexity Low_complexity 1 38 0 683 283 107 54 chr5 9455329 9455721 -190174429 + L2 LINE L2 2900 3312 -1 28 0 0 0 chr5 9456765 9456793 -190173357 + AT_rich Low_complexity Low_complexity 1 28 0 324 309 49 29 chr5 9458782 9458986 -190171164 + MER112 DNA MER1_type 53 260 0 278 232 254 17 chr5 9459307 9459484 -190170666 - L2 LINE L2 -1162 2152 1934 314 340 41 46 chr5 9459631 9459700 -190170450 - L2 LINE L2 -5 3267 3199 2005 153 95 5 chr5 9459700 9460091 -190170059 - MSTB LTR MaLR 0 426 1 314 340 41 46 chr5 9460091 9460215 -190169935 - L2 LINE L2 -73 3199 3075 306 163 70 35 chr5 9460226 9460312 -190169838 + MIR SINE MIR 172 260 -2 21 0 0 0 chr5 9461983 9462004 -190168146 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 9462452 9462475 -190167675 + AT_rich Low_complexity Low_complexity 1 23 0 536 269 105 45 chr5 9463373 9463658 -190166492 - L2 LINE L2 -73 3240 2903 3231 136 73 25 chr5 9463658 9464261 -190165889 - MER41B LTR ERV1 -1 634 3 536 269 105 45 chr5 9464261 9464413 -190165737 - L2 LINE L2 -410 2903 2762 1543 193 84 11 chr5 9464431 9464810 -190165340 - MER50 LTR ERV1 0 734 328 1550 205 92 49 chr5 9464818 9465234 -190164916 - L1MD3 LINE L1 -173 7822 7425 412 194 0 0 chr5 9465234 9465301 -190164849 - MLT1F1 LTR MaLR -456 111 45 1550 205 92 49 chr5 9465301 9465524 -190164626 - L1MD3 LINE L1 -570 7425 6874 375 250 17 17 chr5 9465738 9465858 -190164292 - L1MC3 LINE L1 -927 6858 6739 * 1970 228 2 4 chr5 9465855 9466321 -190163829 - L1MC3 LINE L1 -1798 5987 5523 637 213 94 35 chr5 9466321 9466523 -190163627 + MER97c DNA MER1_type? 374 587 -503 21 0 0 0 chr5 9467688 9467709 -190162441 + AT_rich Low_complexity Low_complexity 1 21 0 1617 206 0 8 chr5 9467718 9468091 -190162059 - L1MA4 LINE L1 -29 6271 5902 823 209 0 0 chr5 9468089 9468280 -190161870 - L1 LINE L1 -3221 3107 2917 * 6955 194 30 9 chr5 9468325 9470454 -190159696 - L1 LINE L1 -4065 1263 5 333 235 43 17 chr5 9470626 9470741 -190159409 + MER97b DNA MER1_type? 936 1053 0 23 54 0 0 chr5 9470847 9470884 -190159266 + AT_rich Low_complexity Low_complexity 1 37 0 225 224 20 0 chr5 9471145 9471194 -190158956 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 180 200 0 0 chr5 9471571 9471611 -190158539 + (CTA)n Simple_repeat Simple_repeat 3 42 0 2358 112 27 33 chr5 9472095 9472461 -190157689 - THE1B LTR MaLR 0 364 1 11591 92 14 2 chr5 9472461 9474022 -190156128 - THE1B-int LTR MaLR 0 1580 1 2243 148 28 14 chr5 9474022 9474381 -190155769 - THE1B LTR MaLR 0 364 1 264 30 0 0 chr5 9475831 9475864 -190154286 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 272 339 74 83 chr5 9476039 9476473 -190153677 + L2 LINE L2 2842 3271 -1 248 302 129 72 chr5 9476533 9476851 -190153299 - L2 LINE L2 -6 3266 2931 2075 164 42 11 chr5 9477985 9478363 -190151787 - MLT1B LTR MaLR 0 390 1 2147 235 70 34 chr5 9478388 9479653 -190150497 - L1ME1 LINE L1 -5 6161 4858 729 200 8 0 chr5 9479671 9479796 -190150354 - Tigger2a DNA MER2_type -1 433 308 616 204 6 78 chr5 9479812 9479979 -190150171 - Tigger2a DNA MER2_type -279 155 1 6063 241 66 22 chr5 9479983 9480727 -190149423 - L1ME1 LINE L1 -1307 4839 4129 2570 71 0 0 chr5 9480727 9481036 -190149114 - AluY SINE Alu -2 309 1 6063 241 66 22 chr5 9481036 9482669 -190147481 - L1ME1 LINE L1 -2017 4129 2359 2630 169 55 3 chr5 9482784 9483440 -190146710 - L1MA4 LINE L1 -743 5403 4743 4404 140 12 65 chr5 9483440 9484356 -190145794 + L1MA4 LINE L1 5428 6294 -6 509 159 215 0 chr5 9485056 9485163 -190144987 - FLAM_A SINE Alu -3 130 1 385 274 76 32 chr5 9489046 9489203 -190140947 + MIR SINE MIR 86 249 -13 224 344 57 8 chr5 9489269 9489391 -190140759 + MIR SINE MIR 69 196 -66 21 36 0 0 chr5 9491906 9491934 -190138216 + AT_rich Low_complexity Low_complexity 1 28 0 4130 141 65 23 chr5 9492252 9493038 -190137112 + LTR1B LTR ERV1 1 819 -7 1763 164 3 9 chr5 9493151 9493475 -190136675 - L1MC/D LINE L1 -2034 5751 5430 236 224 0 26 chr5 9493787 9493819 -190136331 + T-rich Low_complexity Low_complexity 5 36 -42 1245 51 0 0 chr5 9493819 9493975 -190136175 - L1PA5 LINE L1 -1 6153 5998 236 224 0 26 chr5 9493975 9494018 -190136132 + T-rich Low_complexity Low_complexity 36 78 0 2181 122 81 57 chr5 9498005 9498240 -190131910 + MSTA LTR MaLR 1 252 -176 2284 68 0 4 chr5 9498240 9498521 -190131629 + AluY SINE Alu 28 307 -4 2181 122 81 57 chr5 9498521 9498703 -190131447 + MSTA LTR MaLR 252 428 0 252 122 0 0 chr5 9500622 9500663 -190129487 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 203 244 0 110 chr5 9503213 9503295 -190126855 - L2 LINE L2 -63 3209 3137 21 0 0 0 chr5 9503457 9503478 -190126672 + AT_rich Low_complexity Low_complexity 1 21 0 2235 107 3 3 chr5 9505849 9506148 -190124002 - AluSq SINE Alu -14 299 1 323 288 75 27 chr5 9506808 9506954 -190123196 + L1ME1 LINE L1 50 202 -5917 2243 118 3 0 chr5 9507130 9507435 -190122715 - AluSx SINE Alu -6 306 1 1139 266 57 36 chr5 9507625 9508350 -190121800 + L1ME1 LINE L1 1122 1898 -4412 2664 249 61 17 chr5 9508351 9509634 -190120516 + L1ME1 LINE L1 4808 6144 -5 2064 109 0 18 chr5 9509658 9509966 -190120184 + AluSg SINE Alu 1 303 0 859 194 66 0 chr5 9510102 9510313 -190119837 - L1M3 LINE L1 -856 5478 5254 667 182 35 0 chr5 9510346 9510489 -190119661 + L1 LINE L1 5099 5246 -900 5354 101 14 9 chr5 9511445 9512250 -190117900 - L1PA13 LINE L1 -8 6155 5347 1179 252 72 31 chr5 9512407 9512851 -190117299 + MLT1C LTR MaLR 1 462 -5 1375 206 23 30 chr5 9514213 9514514 -190115636 + AluJb SINE Alu 1 299 -13 2576 34 0 3 chr5 9517159 9517456 -190112694 - AluY SINE Alu -15 296 1 679 175 7 0 chr5 9517743 9517880 -190112270 - L1P5 LINE L1 -450 5706 5569 532 196 0 0 chr5 9517880 9517977 -190112173 + L1PB4 LINE L1 6055 6156 0 276 30 0 0 chr5 9518372 9518405 -190111745 + (TG)n Simple_repeat Simple_repeat 1 33 0 243 125 0 0 chr5 9518407 9518447 -190111703 + (GA)n Simple_repeat Simple_repeat 2 41 0 321 26 0 0 chr5 9518940 9518978 -190111172 + (TG)n Simple_repeat Simple_repeat 2 39 0 2455 76 0 0 chr5 9519018 9519309 -190110841 + AluSg SINE Alu 1 291 -19 319 49 0 0 chr5 9519705 9519746 -190110404 - AluY SINE Alu -261 47 7 422 327 186 4 chr5 9519765 9520028 -190110122 - L1ME LINE L1 -299 5822 5512 346 298 116 0 chr5 9520609 9520790 -190109360 - MLT1G3 LTR MaLR -174 356 155 1734 159 12 72 chr5 9521276 9521678 -190108472 - MLT1B LTR MaLR 0 390 13 295 309 11 0 chr5 9522025 9522119 -190108031 - L1ME LINE L1 -2255 3891 3797 2163 98 9 0 chr5 9522132 9522617 -190107533 - MER41A LTR ERV1 -107 528 1 221 276 0 0 chr5 9524132 9524190 -190105960 + (TA)n Simple_repeat Simple_repeat 2 59 0 241 233 27 0 chr5 9524201 9524274 -190105876 - L1MC4 LINE L1 -1344 6698 6624 8905 99 25 6 chr5 9524941 9526198 -190103952 - HSMAR1 DNA Mariner -3 1284 4 221 83 28 0 chr5 9526699 9526735 -190103415 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1531 230 53 45 chr5 9527743 9528235 -190101915 + MLT1D LTR MaLR 1 496 -9 241 323 16 48 chr5 9531222 9531346 -190098804 + L2 LINE L2 3193 3312 -1 192 372 99 33 chr5 9531383 9531504 -190098646 + MIR3 SINE MIR 53 181 -27 454 144 0 44 chr5 9531865 9531955 -190098195 - AluS SINE Alu -1 308 223 301 282 127 0 chr5 9532170 9532280 -190097870 + MER94 DNA DNA 11 134 0 2182 184 49 2 chr5 9533011 9533418 -190096732 + MSTB LTR MaLR 1 426 0 11232 49 1 1 chr5 9533589 9535757 -190094393 - L1PA5 LINE L1 -4 6150 3983 216 364 64 12 chr5 9536322 9536495 -190093655 + MIR SINE MIR 21 202 -60 2102 205 100 4 chr5 9536523 9537031 -190093119 + MER89 LTR ERV1 1 557 -2 384 219 117 16 chr5 9539368 9539496 -190090654 - MLT1K LTR MaLR -30 558 418 211 383 47 0 chr5 9539592 9539699 -190090451 + MIR SINE MIR 131 242 -20 611 111 11 0 chr5 9539902 9539992 -190090158 - AluSc SINE Alu -3 306 216 2508 122 8 3 chr5 9540299 9540661 -190089489 - THE1B LTR MaLR 0 364 1 228 297 44 0 chr5 9540835 9540926 -190089224 + MLT1J LTR MaLR 73 167 -344 1035 156 19 0 chr5 9540987 9541147 -190089003 + U1 snRNA snRNA 3 165 0 238 314 58 23 chr5 9541194 9541366 -190088784 + MLT1J LTR MaLR 236 413 -98 264 233 0 0 chr5 9541574 9541647 -190088503 + (CA)n Simple_repeat Simple_repeat 2 74 0 829 123 77 0 chr5 9542660 9542790 -190087360 + AluSg/x SINE Alu 155 294 -16 285 248 133 0 chr5 9542963 9543076 -190087074 - LTR16A LTR ERVL 0 450 323 1230 186 125 18 chr5 9543451 9543562 -190086588 + AluJb SINE Alu 1 99 -213 216 0 0 0 chr5 9543562 9543586 -190086564 + (CTA)n Simple_repeat Simple_repeat 1 24 0 1230 186 125 18 chr5 9543586 9543753 -190086397 + AluJb SINE Alu 99 309 -3 42 37 0 37 chr5 9543789 9543871 -190086279 + AT_rich Low_complexity Low_complexity 1 79 0 295 341 142 24 chr5 9545139 9545349 -190084801 - L2 LINE L2 -1378 1936 1752 256 31 0 0 chr5 9545349 9545381 -190084769 + (TTTG)n Simple_repeat Simple_repeat 2 92 0 2074 82 25 11 chr5 9545381 9545661 -190084489 - AluSx SINE Alu -1 315 1 295 341 142 24 chr5 9545661 9546035 -190084115 - L2 LINE L2 -1561 1753 1282 315 132 0 0 chr5 9546330 9546383 -190083767 - MSTC LTR MaLR -12 416 364 669 171 66 13 chr5 9546417 9546586 -190083564 - MSTC LTR MaLR -224 204 1 834 272 119 48 chr5 9547071 9547837 -190082313 - L1M4 LINE L1 -990 5156 4277 1764 203 7 47 chr5 9547837 9548241 -190081909 + MLT1B LTR MaLR 1 388 -2 834 272 119 48 chr5 9548241 9548640 -190081510 - L1M4 LINE L1 -1869 4277 3908 622 297 97 56 chr5 9548675 9549158 -190080992 - L1MCa LINE L1 -4064 2151 1768 342 335 5 5 chr5 9549194 9549385 -190080765 - L1MCa LINE L1 -4688 1708 1518 465 297 82 39 chr5 9549409 9549665 -190080485 + L1M4c LINE L1 1213 1479 -4905 31 26 0 0 chr5 9549800 9549838 -190080312 + AT_rich Low_complexity Low_complexity 1 38 0 211 325 90 32 chr5 9550021 9550168 -190079982 + MIR SINE MIR 19 169 -63 2060 149 0 0 chr5 9550758 9550773 -190079377 - AluSx SINE Alu -3 309 295 257 0 30 0 chr5 9550773 9550806 -190079344 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 2060 149 0 0 chr5 9550806 9551099 -190079051 - AluSx SINE Alu -16 296 1 383 268 96 19 chr5 9552806 9552963 -190077187 - MIR SINE MIR -46 216 48 268 337 22 17 chr5 9553241 9553402 -190076748 - MIR SINE MIR -60 148 9 1091 170 20 0 chr5 9553673 9553873 -190076277 - MLT1B LTR MaLR 0 390 187 357 321 30 0 chr5 9553873 9553952 -190076198 + GA-rich Low_complexity Low_complexity 2 88 -48 1784 171 26 20 chr5 9553952 9554257 -190075893 + AluJb SINE Alu 4 310 -2 357 321 30 0 chr5 9554257 9554308 -190075842 + GA-rich Low_complexity Low_complexity 88 136 0 671 174 81 19 chr5 9554355 9554516 -190075634 - MLT1B LTR MaLR -217 173 3 230 285 174 25 chr5 9557209 9557444 -190072706 + MLT1J2 LTR MaLR 53 322 -128 3417 151 16 71 chr5 9557537 9558268 -190071882 - LTR8 LTR ERV1 0 691 1 353 304 22 14 chr5 9558687 9558825 -190071325 + MIR SINE MIR 65 203 -59 223 331 72 22 chr5 9558958 9559097 -190071053 - L2 LINE L2 -192 3121 2976 277 169 84 28 chr5 9559252 9559323 -190070827 - MLT1B LTR MaLR -314 76 2 491 273 98 69 chr5 9559328 9559779 -190070371 - L2 LINE L2 -382 2932 2469 6914 153 39 6 chr5 9559781 9562034 -190068116 - L1MA8 LINE L1 -54 7656 5340 1708 166 15 207 chr5 9562034 9562763 -190067387 - MER21A LTR ERV1 -273 658 70 2961 192 40 38 chr5 9562931 9563146 -190067004 - L1MA8 LINE L1 -2264 5301 5088 1642 214 0 3 chr5 9563146 9563457 -190066693 - AluJb SINE Alu 0 310 1 2961 192 40 38 chr5 9563457 9564075 -190066075 - L1MA8 LINE L1 -2477 5088 4466 1090 244 174 16 chr5 9564071 9564808 -190065342 - L1MA8 LINE L1 -3792 3773 2919 * 1621 176 116 59 chr5 9564809 9565213 -190064937 + MSTC LTR MaLR 2 428 0 3514 247 102 109 chr5 9565215 9565645 -190064505 + MSTC-int LTR MaLR 2 434 -1301 1206 67 11 11 chr5 9565645 9565824 -190064326 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 704 134 0 0 chr5 9565826 9565923 -190064227 - AluSg/x SINE Alu -31 281 185 3514 247 102 109 chr5 9565923 9567140 -190063010 + MSTC-int LTR MaLR 435 1735 0 1687 184 44 49 chr5 9567140 9567547 -190062603 + MSTC LTR MaLR 1 405 -23 3144 229 285 22 chr5 9567551 9569764 -190060386 - L1M2 LINE L1 -4317 2790 1 862 185 42 21 chr5 9569767 9569956 -190060194 - MLT1D LTR MaLR -312 193 1 696 242 54 112 chr5 9570890 9571353 -190058797 + LTR40c LTR ERVL 1 436 -29 185 261 22 0 chr5 9571748 9571794 -190058356 - MIR SINE MIR -160 102 56 349 93 147 27 chr5 9571860 9571935 -190058215 + L1PB1 LINE L1 6067 6150 -1 2308 82 0 0 chr5 9572102 9572394 -190057756 - AluY SINE Alu -14 297 6 1500 209 16 33 chr5 9572964 9573073 -190057077 + MLT1A1 LTR MaLR 2 111 -254 2380 140 48 27 chr5 9573073 9573486 -190056664 - MSTB LTR MaLR 0 426 5 1500 209 16 33 chr5 9573486 9573744 -190056406 + MLT1A1 LTR MaLR 111 363 -2 207 255 20 0 chr5 9573799 9573850 -190056300 + GA-rich Low_complexity Low_complexity 3 54 0 183 323 10 42 chr5 9575451 9575547 -190054603 - MIR SINE MIR -71 191 99 188 247 108 11 chr5 9575771 9575864 -190054286 - MIR SINE MIR -86 122 21 331 151 41 0 chr5 9576346 9576419 -190053731 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 230 250 0 15 chr5 9576419 9576487 -190053663 - L1MC4 LINE L1 -1339 6703 6637 1320 271 58 23 chr5 9576822 9577240 -190052910 - L1M4 LINE L1 -2668 3478 3023 2177 109 14 0 chr5 9577240 9577533 -190052617 - AluSx SINE Alu -15 297 1 1320 271 58 23 chr5 9577533 9577822 -190052328 - L1M4 LINE L1 -3123 3023 2746 37 23 0 0 chr5 9577987 9578031 -190052119 + AT_rich Low_complexity Low_complexity 1 44 0 2884 226 53 7 chr5 9578162 9579042 -190051108 - L1MCa LINE L1 -2190 4236 3316 761 175 0 0 chr5 9579105 9579225 -190050925 + FLAM_C SINE Alu 5 124 -19 2978 218 60 42 chr5 9579270 9580400 -190049750 + L1M2 LINE L1 2098 3405 -4161 6019 200 70 20 chr5 9580405 9580604 -190049546 - L1MCa LINE L1 -4763 1663 1475 2569 115 13 8 chr5 9580604 9580977 -190049173 + THE1C LTR MaLR 1 375 0 6019 200 70 20 chr5 9580977 9582315 -190047835 - L1MCa LINE L1 -4951 1475 49 797 253 64 9 chr5 9582358 9582777 -190047373 - L1MEc LINE L1 -2955 3260 2819 620 257 70 63 chr5 9582798 9583729 -190046421 - L1MEc LINE L1 -3446 2769 1871 25 31 0 0 chr5 9583734 9583766 -190046384 + AT_rich Low_complexity Low_complexity 1 32 0 1066 219 99 44 chr5 9583789 9584242 -190045908 + Charlie1b DNA MER1_type 40 517 -6 417 292 64 9 chr5 9584281 9584500 -190045650 - L1MEc LINE L1 -4581 1815 1585 1638 206 30 30 chr5 9585553 9585918 -190044232 - MLT1A1 LTR MaLR 0 365 1 2823 10 0 0 chr5 9587676 9587984 -190042166 - AluY SINE Alu -3 308 1 2349 58 0 7 chr5 9587986 9588279 -190041871 - AluY SINE Alu -20 291 1 29 0 0 0 chr5 9588738 9588767 -190041383 + AT_rich Low_complexity Low_complexity 1 29 0 588 330 36 28 chr5 9588859 9589217 -190040933 - MLT1I LTR MaLR -2 407 47 4386 236 54 30 chr5 9589449 9590389 -190039761 - L1MDa LINE L1 -2296 4244 3328 1704 179 0 48 chr5 9590389 9590525 -190039625 + AluJo SINE Alu 1 142 -170 2167 107 19 10 chr5 9590525 9590834 -190039316 + AluSp SINE Alu 1 312 -1 1704 179 0 48 chr5 9590834 9591010 -190039140 + AluJo SINE Alu 142 298 -14 4386 236 54 30 chr5 9591010 9591887 -190038263 - L1MDa LINE L1 -3212 3328 2385 * 4451 223 99 81 chr5 9591855 9593918 -190036232 - L1MDa LINE L1 -4440 2100 1 342 279 29 29 chr5 9594006 9594110 -190036040 + MER5B DNA MER1_type 12 115 -63 23 0 0 0 chr5 9594612 9594635 -190035515 + AT_rich Low_complexity Low_complexity 1 23 0 216 313 36 24 chr5 9595210 9595293 -190034857 + L2 LINE L2 2677 2760 -554 201 194 48 29 chr5 9596232 9596335 -190033815 + (TTATA)n Simple_repeat Simple_repeat 4 108 0 776 122 76 15 chr5 9597004 9597135 -190033015 + MER85 DNA T2_type 1 139 0 643 123 0 0 chr5 9597775 9597856 -190032294 + AluS SINE Alu 2 82 -231 2933 94 10 5 chr5 9597872 9598274 -190031876 - HERVK9 LTR ERVK -5512 404 1 3337 88 4 67 chr5 9598274 9598784 -190031366 - MER9 LTR ERVK 0 511 34 2615 83 0 11 chr5 9598790 9599139 -190031011 + THE1B-int LTR MaLR 1236 1580 0 2086 159 25 27 chr5 9599139 9599504 -190030646 + THE1B LTR MaLR 1 364 0 1238 194 92 9 chr5 9599505 9599830 -190030320 - L1MCa LINE L1 -4865 1561 1210 180 0 0 0 chr5 9599844 9599864 -190030286 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 3198 168 11 13 chr5 9599864 9600402 -190029748 - L1PA15 LINE L1 -11 6154 5616 6042 223 33 13 chr5 9600419 9601921 -190028229 - L1PA13 LINE L1 -2734 4063 2532 2409 233 2 2 chr5 9601923 9602386 -190027764 - L1PA13 LINE L1 -6324 463 1 4405 200 13 17 chr5 9602414 9603313 -190026837 - L1MCa LINE L1 -5229 1197 302 875 186 56 0 chr5 9603986 9604147 -190026003 - MLT1A1 LTR MaLR 0 365 196 3498 28 0 0 chr5 9604147 9604544 -190025606 - L1PA4 LINE L1 -296 5859 5463 7403 68 9 1 chr5 9604904 9606135 -190024015 + L1PA8 LINE L1 4930 6168 -4 870 160 143 111 chr5 9606339 9606583 -190023567 - MLT1B LTR MaLR 0 390 139 2256 133 44 33 chr5 9606600 9606960 -190023190 + THE1B LTR MaLR 1 364 0 4605 88 7 2 chr5 9606960 9607570 -190022580 + THE1B-int LTR MaLR 1 613 -967 186 103 0 0 chr5 9607579 9607608 -190022542 + (A)n Simple_repeat Simple_repeat 1 29 0 341 306 57 0 chr5 9607734 9607858 -190022292 - L3 LINE CR1 -124 1453 1323 866 206 119 0 chr5 9608283 9608477 -190021673 + MER58A DNA MER1_type 7 223 -1 1922 114 21 25 chr5 9608595 9608875 -190021275 + AluSx SINE Alu 25 303 -9 196 350 49 7 chr5 9608903 9609046 -190021104 - L3 LINE CR1 -209 1368 1220 21 0 0 0 chr5 9610023 9610044 -190020106 + AT_rich Low_complexity Low_complexity 1 21 0 899 209 25 6 chr5 9610451 9610783 -190019367 + FRAM SINE Alu 1 199 0 795 80 40 23 chr5 9610794 9610969 -190019181 + GA-rich Low_complexity Low_complexity 1 178 0 243 79 0 0 chr5 9610975 9611013 -190019137 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 433 145 29 29 chr5 9611173 9611311 -190018839 + GA-rich Low_complexity Low_complexity 3 140 0 910 84 0 53 chr5 9611315 9611336 -190018814 + (GGAA)n Simple_repeat Simple_repeat 1 199 0 910 84 0 53 chr5 9611336 9611526 -190018624 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 210 307 64 45 chr5 9611574 9611776 -190018374 - L2 LINE L2 -1486 1828 1623 279 0 0 0 chr5 9612859 9612890 -190017260 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 351 368 78 59 chr5 9612907 9613331 -190016819 - L2 LINE L2 -13 3259 2828 242 246 35 18 chr5 9615923 9616037 -190014113 + (TA)n Simple_repeat Simple_repeat 2 117 0 21 36 0 0 chr5 9618532 9618560 -190011590 + AT_rich Low_complexity Low_complexity 1 28 0 345 288 96 0 chr5 9623000 9623125 -190007025 + MLT1F LTR MaLR 3 139 -403 2742 118 3 6 chr5 9624538 9624903 -190005247 - THE1B LTR MaLR 0 364 1 224 272 66 73 chr5 9625095 9625231 -190004919 + L2 LINE L2 2843 2977 -337 202 286 250 27 chr5 9625496 9625608 -190004542 + L2 LINE L2 3126 3262 -10 993 284 104 6 chr5 9625717 9626052 -190004098 - MLT1F LTR MaLR -174 368 1 409 254 46 56 chr5 9626079 9626276 -190003874 - MLT1F-int LTR MaLR -14 1357 1163 235 335 163 10 chr5 9626948 9627157 -190002993 + L3 LINE CR1 1241 1481 -96 364 275 53 23 chr5 9627171 9627302 -190002848 - L2 LINE L2 -4 3309 3175 206 129 61 38 chr5 9627358 9627490 -190002660 + (TA)n Simple_repeat Simple_repeat 2 136 0 4713 297 96 27 chr5 9627643 9628184 -190001966 - L2 LINE L2 -350 2964 2461 279 0 0 0 chr5 9628184 9628215 -190001935 + (TG)n Simple_repeat Simple_repeat 2 32 0 4713 297 96 27 chr5 9628215 9630055 -190000095 - L2 LINE L2 -853 2461 420 203 411 11 39 chr5 9630450 9630630 -189999520 + L3 LINE CR1 1369 1543 -34 1310 174 42 51 chr5 9631540 9631701 -189998449 - MER33 DNA MER1_type -2269 316 157 1706 56 0 0 chr5 9631701 9631928 -189998222 + AluY SINE Alu 86 312 0 1310 174 42 51 chr5 9631928 9632076 -189998074 - MER33 DNA MER1_type -2428 157 9 731 256 58 18 chr5 9632133 9632356 -189997794 - MIR SINE MIR 0 262 31 1718 57 13 44 chr5 9632421 9632650 -189997500 + AluY SINE Alu 79 300 -11 207 271 0 0 chr5 9633484 9633532 -189996618 + GA-rich Low_complexity Low_complexity 4 51 0 1779 162 18 30 chr5 9634135 9634469 -189995681 - THE1C LTR MaLR 0 375 46 225 191 0 0 chr5 9634471 9634518 -189995632 + L1P LINE L1 4326 4372 -1774 376 160 12 8 chr5 9634524 9634602 -189995548 - MSTA LTR MaLR -276 79 1 22 56 0 0 chr5 9634644 9634680 -189995470 + AT_rich Low_complexity Low_complexity 1 36 0 2081 110 3 7 chr5 9634957 9635247 -189994903 - AluSc SINE Alu -18 291 3 29 60 0 0 chr5 9635830 9635880 -189994270 + AT_rich Low_complexity Low_complexity 1 50 0 3097 216 49 10 chr5 9636093 9636824 -189993326 + L1 LINE L1 4194 4953 -1193 397 217 8 70 chr5 9636873 9637002 -189993148 + L2 LINE L2 3193 3313 0 744 194 106 17 chr5 9637176 9637413 -189992737 + MER58D DNA MER1_type 127 384 -2 434 221 69 8 chr5 9637423 9637554 -189992596 + L1M4 LINE L1 2955 3093 -3053 282 226 0 48 chr5 9637555 9637639 -189992511 + L1M4 LINE L1 3043 3122 -3024 22 0 0 0 chr5 9637795 9637817 -189992333 + AT_rich Low_complexity Low_complexity 1 22 0 3339 128 18 22 chr5 9637825 9638380 -189991770 - L1MA6 LINE L1 -6 6294 5742 250 310 62 9 chr5 9638691 9638804 -189991346 - MIR SINE MIR -1 261 143 196 109 22 22 chr5 9639353 9639399 -189990751 + (TA)n Simple_repeat Simple_repeat 2 47 0 382 331 78 9 chr5 9639401 9639732 -189990418 + L1ME3 LINE L1 5455 5825 -337 22 88 0 0 chr5 9639776 9639833 -189990317 + AT_rich Low_complexity Low_complexity 1 57 0 223 261 18 42 chr5 9640447 9640612 -189989538 + (TTG)n Simple_repeat Simple_repeat 3 163 0 254 257 16 44 chr5 9640830 9641013 -189989137 + (TTG)n Simple_repeat Simple_repeat 3 180 0 2385 86 0 16 chr5 9643623 9643937 -189986213 + AluY SINE Alu 1 309 -2 5051 167 16 6 chr5 9643980 9644836 -189985314 - MER49 LTR ERV1 -58 865 1 38529 34 20 4 chr5 9645272 9651295 -189978855 - L1PA3 LINE L1 0 6155 13 241 340 167 27 chr5 9652047 9652739 -189977411 - L2 LINE L2 -19 3253 2467 186 269 269 33 chr5 9653205 9653476 -189976674 - L2 LINE L2 -1215 2099 1765 2264 151 48 22 chr5 9654090 9654507 -189975643 - MSTA LTR MaLR 0 428 1 2666 190 40 2 chr5 9654515 9655016 -189975134 - MSTA-int LTR MaLR -8 1643 1124 977 155 0 7 chr5 9655117 9655272 -189974878 - MSTA-int LTR MaLR -505 1075 922 2476 18 0 0 chr5 9656179 9656452 -189973698 - AluYb8 SINE Alu -10 308 36 2371 89 3 0 chr5 9656585 9656889 -189973261 - AluSp SINE Alu -8 305 1 23 0 0 0 chr5 9659731 9659754 -189970396 + AT_rich Low_complexity Low_complexity 1 23 0 675 35 0 0 chr5 9659781 9659867 -189970283 + L1PA4 LINE L1 6067 6152 -3 2056 125 0 10 chr5 9660031 9660328 -189969822 - AluSg SINE Alu -16 294 1 346 223 11 43 chr5 9660716 9660810 -189969340 - MER8 DNA MER2_type -53 186 96 21 36 0 0 chr5 9661236 9661264 -189968886 + AT_rich Low_complexity Low_complexity 1 28 0 354 216 14 0 chr5 9661634 9661708 -189968442 + L1ME2 LINE L1 6075 6149 -15 999 213 42 42 chr5 9661728 9661967 -189968183 + MER8 DNA MER2_type 1 239 0 822 55 9 0 chr5 9662593 9662702 -189967448 - L1PA4 LINE L1 -3 6152 6043 599 253 78 60 chr5 9662714 9662820 -189967330 - L1M3a LINE L1 -4708 1688 1585 3815 115 21 2 chr5 9662820 9663394 -189966756 - L1PA15 LINE L1 -3 6162 5578 599 253 78 60 chr5 9663394 9663976 -189966174 - L1M3a LINE L1 -4811 1585 1011 2272 117 3 0 chr5 9664985 9665293 -189964857 - AluSg SINE Alu -1 309 1 1497 203 6 19 chr5 9665388 9665703 -189964447 - AluJo SINE Alu -1 311 1 433 260 86 88 chr5 9665791 9665882 -189964268 - L1M4 LINE L1 -1498 4648 4558 798 21 0 0 chr5 9665882 9665975 -189964175 - L1PA5 LINE L1 -6 6148 6056 433 260 86 88 chr5 9665975 9666267 -189963883 - L1M4 LINE L1 -1588 4558 4266 345 329 57 33 chr5 9666343 9666643 -189963507 - L1M4 LINE L1 -2922 3224 2893 24 53 0 0 chr5 9667288 9667326 -189962824 + AT_rich Low_complexity Low_complexity 1 38 0 1964 130 161 34 chr5 9667379 9667429 -189962721 - MSTA LTR MaLR 0 428 386 2150 106 21 58 chr5 9667429 9667805 -189962345 + THE1B LTR MaLR 3 364 0 1964 130 161 34 chr5 9667805 9668132 -189962018 - MSTA LTR MaLR -42 386 3 23 33 0 0 chr5 9668355 9668385 -189961765 + AT_rich Low_complexity Low_complexity 1 30 0 207 333 13 13 chr5 9669225 9669303 -189960847 + L2 LINE L2 3189 3266 -6 1215 194 22 86 chr5 9669365 9669689 -189960461 - MLT1B LTR MaLR 0 390 88 415 324 130 12 chr5 9670281 9670627 -189959523 - L1M4 LINE L1 -1621 4525 4139 189 107 0 0 chr5 9670649 9670677 -189959473 + (TATATG)n Simple_repeat Simple_repeat 6 33 0 436 273 10 11 chr5 9670725 9670900 -189959250 - L1M4 LINE L1 -2209 3937 3764 264 278 60 20 chr5 9672922 9673073 -189957077 - Charlie7 DNA MER1_type -22 2590 2434 1865 163 137 11 chr5 9674996 9675376 -189954774 + MSTA LTR MaLR 1 428 0 21 57 0 0 chr5 9676605 9676640 -189953510 + AT_rich Low_complexity Low_complexity 1 35 0 211 321 95 42 chr5 9677385 9677553 -189952597 - MIR SINE MIR -13 249 73 189 216 34 0 chr5 9677611 9677699 -189952451 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 426 308 0 8 chr5 9677712 9677832 -189952318 + L2 LINE L2 1729 1847 -1467 697 231 36 32 chr5 9677849 9678070 -189952080 - L1M4 LINE L1 -1084 6481 6260 528 131 15 41 chr5 9678162 9678512 -189951638 + (TA)n Simple_repeat Simple_repeat 1 340 0 398 262 54 50 chr5 9678565 9678786 -189951364 - L1MA9 LINE L1 -74 6238 6017 544 204 91 11 chr5 9678797 9678983 -189951167 - L1M4 LINE L1 -1542 6023 5823 641 221 7 0 chr5 9679002 9679138 -189951012 + FRAM SINE Alu 38 174 -2 225 237 75 75 chr5 9679335 9679428 -189950722 - MIR SINE MIR -74 188 96 1766 179 18 25 chr5 9680607 9681003 -189949147 + L1 LINE L1 3608 4000 -2146 1657 288 53 21 chr5 9681038 9681575 -189948575 - L1M4 LINE L1 -4704 2861 2286 225 65 0 0 chr5 9681575 9681606 -189948544 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1657 288 53 21 chr5 9681606 9681895 -189948255 - L1M4 LINE L1 -5279 2286 2008 1793 265 52 42 chr5 9681966 9682663 -189947487 - L1M4 LINE L1 -6320 1169 466 203 337 63 11 chr5 9682962 9683057 -189947093 + MIR SINE MIR 163 262 0 2049 124 7 0 chr5 9683675 9683965 -189946185 + AluSx SINE Alu 1 292 -20 4321 119 17 22 chr5 9685664 9685894 -189944256 + L1MA2 LINE L1 5594 5824 -480 2108 114 7 13 chr5 9685894 9686202 -189943948 + AluSq SINE Alu 1 306 -7 4321 119 17 22 chr5 9686202 9686686 -189943464 + L1MA2 LINE L1 5824 6304 0 1444 105 81 0 chr5 9686718 9686966 -189943184 + L1MA1 LINE L1 6035 6302 0 424 95 24 0 chr5 9687200 9687284 -189942866 + (TA)n Simple_repeat Simple_repeat 1 86 0 2937 95 24 7 chr5 9687286 9687801 -189942349 - L1P5 LINE L1 -451 5700 5175 * 7963 220 21 19 chr5 9687794 9689916 -189940234 - L1 LINE L1 -1007 5139 3014 27 29 0 0 chr5 9691017 9691051 -189939099 + AT_rich Low_complexity Low_complexity 1 34 0 201 259 17 0 chr5 9692183 9692241 -189937909 + (TGAA)n Simple_repeat Simple_repeat 3 61 0 1193 232 26 53 chr5 9692768 9693108 -189937042 + MLT2C1 LTR ERVL 2 332 -65 501 89 40 0 chr5 9693129 9693230 -189936920 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 202 136 17 34 chr5 9693271 9693330 -189936820 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1249 253 180 17 chr5 9693348 9693814 -189936336 - MLT1E LTR MaLR -51 542 1 23 0 0 0 chr5 9694315 9694338 -189935812 + AT_rich Low_complexity Low_complexity 1 23 0 224 211 34 41 chr5 9694378 9694525 -189935625 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 470 196 130 0 chr5 9695986 9696124 -189934026 + L1MC3 LINE L1 6911 7066 -719 252 250 11 57 chr5 9696154 9696242 -189933908 + MLT1F1 LTR MaLR 25 108 -459 2310 189 83 12 chr5 9696246 9696824 -189933326 + L1MC2 LINE L1 6137 7747 0 2473 55 7 0 chr5 9698164 9698472 -189931678 + AluY SINE Alu 1 310 -1 1755 127 36 62 chr5 9699961 9700346 -189929804 - THE1C LTR MaLR 0 375 1 343 347 48 42 chr5 9701157 9701468 -189928682 - L1M4 LINE L1 -1035 5111 4799 524 28 0 28 chr5 9701504 9701575 -189928575 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 1781 191 7 0 chr5 9701578 9701882 -189928268 - AluJb SINE Alu -6 306 1 333 318 86 18 chr5 9702141 9702421 -189927729 - L1M4 LINE L1 -1605 4541 4243 3050 178 27 25 chr5 9703609 9703770 -189926380 - MER50 LTR ERV1 -8 726 567 2169 108 0 0 chr5 9703770 9704068 -189926082 + AluSc SINE Alu 1 298 0 3050 178 27 25 chr5 9704068 9704545 -189925605 - MER50 LTR ERV1 -167 567 86 641 199 42 30 chr5 9704539 9704705 -189925445 - MER50 LTR ERV1 -566 168 1 * 2096 160 22 75 chr5 9706801 9706886 -189923264 + MLT1C LTR MaLR 1 89 -378 2224 99 6 13 chr5 9706886 9707200 -189922950 - AluSp SINE Alu -1 312 1 2096 160 22 75 chr5 9707200 9707607 -189922543 + MLT1C LTR MaLR 89 467 0 21 0 0 0 chr5 9708081 9708102 -189922048 + AT_rich Low_complexity Low_complexity 1 21 0 726 216 13 65 chr5 9708518 9708615 -189921535 + L1MB8 LINE L1 5951 6051 -127 1248 206 68 84 chr5 9708615 9709126 -189921024 + MLT1D LTR MaLR 1 503 -2 726 216 13 65 chr5 9709126 9709259 -189920891 + L1MB8 LINE L1 6051 6169 -9 21 0 0 0 chr5 9709288 9709309 -189920841 + AT_rich Low_complexity Low_complexity 1 21 0 318 295 129 14 chr5 9709546 9709617 -189920533 + L1ME1 LINE L1 5257 5318 -924 1983 89 19 4 chr5 9709617 9709888 -189920262 + AluSq SINE Alu 39 313 0 318 295 129 14 chr5 9709888 9709955 -189920195 + L1ME1 LINE L1 5318 5411 -831 362 268 36 0 chr5 9709955 9710067 -189920083 + L1ME1 LINE L1 6039 6154 -12 545 273 51 16 chr5 9710108 9710361 -189919789 + L1MC5 LINE L1 6978 7239 -722 1828 144 33 0 chr5 9710880 9711176 -189918974 - AluSc SINE Alu 0 305 1 3130 164 25 3 chr5 9711657 9712249 -189917901 + L1MA6 LINE L1 5696 6300 0 1973 41 0 4 chr5 9714195 9714497 -189915653 + L1PA4 LINE L1 5895 6155 0 380 288 50 31 chr5 9714850 9715010 -189915140 - MIR SINE MIR -70 192 30 1398 171 14 27 chr5 9715348 9715640 -189914510 + MLT2C2 LTR ERVL 2 289 -175 1274 79 23 0 chr5 9715671 9715848 -189914302 + THE1C LTR MaLR 1 181 -194 721 219 92 15 chr5 9715907 9716103 -189914047 + L1MC2 LINE L1 6109 6319 -25 703 177 65 16 chr5 9716321 9716507 -189913643 + MER58 DNA MER1_type 2 196 -2224 428 217 11 0 chr5 9716510 9716602 -189913548 + MER58 DNA MER1_type 2325 2417 -3 * 905 343 43 16 chr5 9716602 9717151 -189912999 + Zaphod DNA AcHobo 48 611 -3420 234 281 11 0 chr5 9717396 9717485 -189912665 + L1P2 LINE L1 5710 5799 -355 2423 51 0 10 chr5 9718963 9719257 -189910893 + AluY SINE Alu 13 303 -8 35604 36 25 1 chr5 9720092 9725620 -189904530 + L1PA3 LINE L1 1 6176 0 4786 244 100 18 chr5 9725675 9727679 -189902471 - L1PA13 LINE L1 -4003 2794 617 395 156 0 0 chr5 9727686 9727750 -189902400 - L1PA13 LINE L1 -6723 64 1 1249 240 72 33 chr5 9727759 9728340 -189901810 - L1M4 LINE L1 -749 5397 4787 2057 154 0 6 chr5 9728340 9728652 -189901498 - AluSx SINE Alu -2 310 1 1249 240 72 33 chr5 9728652 9728711 -189901439 - L1M4 LINE L1 -1359 4787 4732 1523 210 0 52 chr5 9729109 9729418 -189900732 - AluJo SINE Alu -17 295 3 9313 104 20 7 chr5 9729689 9730233 -189899917 + L1PA7 LINE L1 3897 4433 -1713 290 45 23 0 chr5 9730233 9730277 -189899873 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 9313 104 20 7 chr5 9730277 9731216 -189898934 + L1PA7 LINE L1 4433 5399 -747 947 114 0 0 chr5 9731216 9731339 -189898811 + AluSg SINE Alu 1 123 -187 624 110 0 0 chr5 9731359 9731450 -189898700 + L1PA7 LINE L1 5386 5476 -678 5319 76 4 3 chr5 9731481 9731505 -189898645 + L1PA7 LINE L1 5438 5460 -694 195 69 0 0 chr5 9731505 9731534 -189898616 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5319 76 4 3 chr5 9731534 9732220 -189897930 + L1PA7 LINE L1 5460 6149 -5 30 0 0 0 chr5 9732220 9732250 -189897900 + AT_rich Low_complexity Low_complexity 1 30 0 699 244 114 0 chr5 9732561 9732762 -189897388 + MER58A DNA MER1_type 1 224 0 25 65 0 0 chr5 9732980 9733026 -189897124 + AT_rich Low_complexity Low_complexity 1 46 0 378 281 79 31 chr5 9733234 9733462 -189896688 + L1M4 LINE L1 4528 4766 -1380 656 250 83 10 chr5 9733480 9733684 -189896466 + MER20 DNA MER1_type 1 219 0 23 33 0 0 chr5 9734125 9734155 -189895995 + AT_rich Low_complexity Low_complexity 1 30 0 4152 151 17 6 chr5 9735181 9735884 -189894266 + MER50 LTR ERV1 1 711 -23 225 270 150 10 chr5 9737091 9737191 -189892959 - MER5A DNA MER1_type -73 116 3 2336 104 0 0 chr5 9737720 9738018 -189892132 + AluSg SINE Alu 3 300 -10 1091 197 140 9 chr5 9738373 9738688 -189891462 + MLT1A1 LTR MaLR 10 365 0 188 81 48 65 chr5 9739978 9740040 -189890110 + (TCTCTG)n Simple_repeat Simple_repeat 6 66 0 211 315 62 23 chr5 9740092 9740222 -189889928 - MIR SINE MIR -71 191 57 227 114 23 0 chr5 9740293 9740337 -189889813 + (TA)n Simple_repeat Simple_repeat 2 46 0 203 407 68 0 chr5 9740738 9740856 -189889294 - L2 LINE L2 0 3272 3147 338 233 14 0 chr5 9741023 9741096 -189889054 - MIR SINE MIR -76 186 113 596 332 42 14 chr5 9741103 9741317 -189888833 + MIR SINE MIR 5 224 -38 708 250 96 33 chr5 9741331 9741717 -189888433 + MLT1C LTR MaLR 2 464 -3 591 282 88 12 chr5 9742853 9743508 -189886642 + L1MEc LINE L1 1702 2474 -3922 518 319 65 4 chr5 9743747 9743976 -189886174 - HAL1 LINE L1 -1908 599 357 539 192 33 0 chr5 9744008 9744128 -189886022 - MLT2E LTR ERVL -1 627 504 2315 209 31 45 chr5 9744248 9744869 -189885281 + MER90 LTR ERV1 3 614 0 512 214 71 0 chr5 9744970 9745110 -189885040 + L1MEc LINE L1 1941 2090 -4306 303 307 45 25 chr5 9745370 9745572 -189884578 - HAL1 LINE L1 -2275 232 27 317 227 152 8 chr5 9745972 9746104 -189884046 - MER58C DNA MER1_type -11 204 54 42 57 0 0 chr5 9746717 9746787 -189883363 + AT_rich Low_complexity Low_complexity 1 70 0 32 0 0 0 chr5 9748105 9748137 -189882013 + AT_rich Low_complexity Low_complexity 1 32 0 388 193 18 0 chr5 9748886 9748995 -189881155 + (TA)n Simple_repeat Simple_repeat 1 111 0 316 277 69 15 chr5 9749000 9749130 -189881020 + MER106B DNA MER1_type 923 1059 0 23 86 0 0 chr5 9749433 9749491 -189880659 + AT_rich Low_complexity Low_complexity 1 58 0 310 385 40 6 chr5 9749562 9749736 -189880414 - MIR SINE MIR -71 191 12 1783 119 15 4 chr5 9749768 9750029 -189880121 + AluSx SINE Alu 39 302 -10 203 417 45 15 chr5 9752034 9752166 -189877984 - MIR3 SINE MIR -71 137 2 2790 140 63 2 chr5 9753779 9754223 -189875927 - LOR1a LTR ERV1 -8 489 19 387 297 59 50 chr5 9754364 9754584 -189875566 - MIR3 SINE MIR -26 236 14 922 205 16 11 chr5 9754629 9754819 -189875331 + MLT2D LTR ERVL 6 196 -218 411 272 10 0 chr5 9754843 9754946 -189875204 + MLT2D LTR ERVL 377 480 -40 230 211 126 32 chr5 9754958 9755053 -189875097 - LTR66 LTR ERVL -171 439 336 249 282 45 18 chr5 9755200 9755310 -189874840 + L1M4 LINE L1 3656 3768 -2378 24 0 0 0 chr5 9755351 9755375 -189874775 + AT_rich Low_complexity Low_complexity 1 24 0 2053 138 164 11 chr5 9755484 9755855 -189874295 - MSTA LTR MaLR 0 428 1 643 305 181 25 chr5 9755904 9756495 -189873655 + L1M4 LINE L1 3606 4288 -1858 21 0 0 0 chr5 9756545 9756566 -189873584 + AT_rich Low_complexity Low_complexity 1 21 0 2274 103 0 22 chr5 9757856 9758167 -189871983 + AluSq SINE Alu 1 304 -9 2223 96 7 0 chr5 9758168 9758470 -189871680 + L1PA14 LINE L1 5856 6159 -2 247 366 0 0 chr5 9758861 9758962 -189871188 + L2 LINE L2 3208 3308 -5 415 325 33 4 chr5 9760036 9760222 -189869928 - MLT1H LTR MaLR -15 534 347 406 313 27 0 chr5 9760848 9760995 -189869155 - MLT1J2 LTR MaLR -195 255 105 582 277 15 42 chr5 9761008 9761268 -189868882 + L1ME3A LINE L1 5917 6169 -1 1119 167 8 41 chr5 9761286 9761455 -189868695 + L1ME LINE L1 5192 5352 -814 1340 193 77 11 chr5 9761455 9761729 -189868421 + AluJb SINE Alu 1 292 -20 1119 167 8 41 chr5 9761729 9761844 -189868306 + L1ME LINE L1 5352 5469 -697 24 32 0 0 chr5 9762764 9762795 -189867355 + AT_rich Low_complexity Low_complexity 1 31 0 1982 141 63 30 chr5 9764306 9764669 -189865481 - THE1C LTR MaLR 0 375 1 1622 178 57 48 chr5 9765098 9765120 -189865030 + MLT1A2 LTR MaLR 1 21 -353 2659 136 30 30 chr5 9765120 9765547 -189864603 + MSTA LTR MaLR 1 427 -1 1622 178 57 48 chr5 9765547 9765614 -189864536 + MLT1A2 LTR MaLR 21 86 -288 1498 196 94 24 chr5 9765614 9765955 -189864195 - MLT1A1 LTR MaLR 0 365 1 1622 178 57 48 chr5 9765955 9766235 -189863915 + MLT1A2 LTR MaLR 86 374 0 1450 170 0 8 chr5 9767458 9767705 -189862445 - L1MA10 LINE L1 -2 6332 6088 1042 156 50 6 chr5 9767706 9767885 -189862265 + MSTA LTR MaLR 1 187 -241 843 83 0 0 chr5 9767894 9768003 -189862147 + MSTA LTR MaLR 320 428 0 2545 200 32 6 chr5 9768022 9768521 -189861629 - L1MB1 LINE L1 -119 6070 5559 329 182 47 12 chr5 9769271 9769441 -189860709 + (TG)n Simple_repeat Simple_repeat 1 176 0 556 91 27 59 chr5 9769477 9769663 -189860487 + (TG)n Simple_repeat Simple_repeat 1 180 0 281 184 29 29 chr5 9769774 9769948 -189860202 + (TG)n Simple_repeat Simple_repeat 1 174 0 482 155 39 13 chr5 9769967 9770203 -189859947 + (TG)n Simple_repeat Simple_repeat 1 242 0 768 0 0 0 chr5 9771002 9771089 -189859061 - L1HS LINE L1 -2 6153 6067 2374 158 27 54 chr5 9773064 9773365 -189856785 - MLT1C LTR MaLR 0 467 182 1565 189 10 30 chr5 9773365 9773667 -189856483 - AluJo SINE Alu -16 296 1 2374 158 27 54 chr5 9773667 9773845 -189856305 - MLT1C LTR MaLR -285 182 1 23 33 0 0 chr5 9775565 9775595 -189854555 + AT_rich Low_complexity Low_complexity 1 30 0 4185 134 46 65 chr5 9776002 9776802 -189853348 + LTR1 LTR ERV1 1 785 0 425 329 22 36 chr5 9776977 9777202 -189852948 + MIR SINE MIR 29 250 -12 1522 148 19 11 chr5 9777406 9777676 -189852474 + L1MA8 LINE L1 6013 6284 -7 2548 84 0 0 chr5 9777730 9778041 -189852109 - AluSx SINE Alu -1 311 1 2455 170 34 5 chr5 9778692 9779139 -189851011 + L1MA4 LINE L1 5426 5885 -415 * 30560 115 7 22 chr5 9779137 9785294 -189844856 + L1PA7 LINE L1 316 6469 0 233 242 81 0 chr5 9785588 9785650 -189844500 + MIR SINE MIR 90 156 -106 1622 183 17 56 chr5 9785727 9786083 -189844067 + MLT1B LTR MaLR 1 342 -48 2068 115 26 50 chr5 9786083 9786583 -189843567 - MER51B LTR ERV1 0 377 1 379 135 0 0 chr5 9786583 9786635 -189843515 + MLT1B LTR MaLR 339 390 0 21 0 0 0 chr5 9787177 9787198 -189842952 + AT_rich Low_complexity Low_complexity 1 21 0 199 250 95 24 chr5 9788292 9788376 -189841774 - L3 LINE CR1 -881 696 607 451 300 137 23 chr5 9788627 9788934 -189841216 - LTR16A LTR ERVL -5 445 104 28 29 0 0 chr5 9789471 9789506 -189840644 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 9789652 9789695 -189840455 + AT_rich Low_complexity Low_complexity 1 43 0 200 315 12 30 chr5 9790391 9790526 -189839624 - MIR3 SINE MIR -53 155 23 3077 164 25 2 chr5 9792755 9793272 -189836878 - Tigger1 DNA MER2_type 0 2418 1890 1041 191 56 72 chr5 9793296 9793600 -189836550 - PABL_B LTR ERV1 -23 644 346 375 327 28 60 chr5 9793604 9793821 -189836329 - PABL_B LTR ERV1 -457 210 1 5940 133 7 14 chr5 9793821 9794742 -189835408 - Tigger1 DNA MER2_type -534 1884 971 2484 84 0 0 chr5 9794986 9795296 -189834854 - AluY SINE Alu -1 310 1 4303 91 10 15 chr5 9795300 9795884 -189834266 - L1PA10 LINE L1 0 6168 5588 1925 136 58 14 chr5 9795884 9796420 -189833730 + L1PA10 LINE L1 4996 5558 -610 1215 237 159 0 chr5 9796599 9796971 -189833179 - MER74C LTR ERVL -27 433 3 192 77 0 0 chr5 9796971 9796997 -189833153 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 285 223 0 0 chr5 9797791 9797885 -189832265 + (TA)n Simple_repeat Simple_repeat 2 95 0 217 267 40 79 chr5 9797902 9798003 -189832147 + MIR3 SINE MIR 77 173 -35 594 227 31 12 chr5 9799537 9799700 -189830450 - L1MA10 LINE L1 -1 6333 6168 1574 204 106 31 chr5 9799708 9800096 -189830054 - L1MA9 LINE L1 -2 6310 5894 23 33 0 0 chr5 9800181 9800211 -189829939 + AT_rich Low_complexity Low_complexity 1 30 0 297 250 0 0 chr5 9801520 9801580 -189828570 + MER81 DNA DNA 29 88 -26 230 219 0 0 chr5 9803373 9803414 -189826736 + (TG)n Simple_repeat Simple_repeat 2 42 0 1369 265 20 6 chr5 9804075 9804433 -189825717 - MER89 LTR ERV1 0 559 197 496 161 23 0 chr5 9804406 9804493 -189825657 - MER89 LTR ERV1 -470 89 1 * 2291 98 0 0 chr5 9805630 9805926 -189824224 + AluSq SINE Alu 1 296 -17 410 226 11 11 chr5 9809215 9809308 -189820842 - LTR16B LTR ERVL 0 464 372 279 301 188 19 chr5 9809317 9809626 -189820524 - L2 LINE L2 -1091 2223 1863 271 342 124 29 chr5 9809638 9809913 -189820237 - L2 LINE L2 -2782 532 232 43 20 0 0 chr5 9811596 9811646 -189818504 + AT_rich Low_complexity Low_complexity 1 50 0 1643 142 22 4 chr5 9811647 9811915 -189818235 - L1MA5A LINE L1 -4 6293 6021 558 281 18 4 chr5 9812028 9812227 -189817923 + L1MEc LINE L1 2062 2230 -4196 23 0 0 0 chr5 9812439 9812462 -189817688 + AT_rich Low_complexity Low_complexity 1 23 0 306 342 94 58 chr5 9813962 9814097 -189816053 - L2 LINE L2 0 3272 3143 2298 181 19 9 chr5 9814097 9814516 -189815634 + L1MA5 LINE L1 5871 6293 -7 306 342 94 58 chr5 9814516 9814743 -189815407 - L2 LINE L2 -129 3143 2897 396 145 0 9 chr5 9814914 9815002 -189815148 + L1PB4 LINE L1 5703 5788 -366 296 171 26 40 chr5 9815011 9815163 -189814987 + (TA)n Simple_repeat Simple_repeat 1 150 0 802 170 26 5 chr5 9815174 9815326 -189814824 + L1PB4 LINE L1 5759 5908 -248 5336 181 34 36 chr5 9815352 9816947 -189813203 - L1P5 LINE L1 -537 5617 4007 658 213 19 0 chr5 9816933 9817093 -189813057 + L1P5 LINE L1 3844 4006 -2140 * 672 268 33 22 chr5 9818330 9818513 -189811637 + MER5A DNA MER1_type 5 189 0 464 36 0 0 chr5 9818660 9818715 -189811435 - L1P LINE L1 -742 5413 5359 6607 29 7 0 chr5 9818715 9819439 -189810711 + L1PA3 LINE L1 5417 6152 -3 2475 72 0 0 chr5 9819812 9820104 -189810046 + AluY SINE Alu 1 292 -19 468 347 66 19 chr5 9820172 9820443 -189809707 - L2 LINE L2 -619 2695 2412 1848 186 3 43 chr5 9820975 9821030 -189809120 + MLT1A1 LTR MaLR 31 87 -278 1739 161 13 26 chr5 9821030 9821340 -189808810 + AluSx SINE Alu 1 306 -6 1848 186 3 43 chr5 9821340 9821633 -189808517 + MLT1A1 LTR MaLR 87 365 0 1575 190 196 0 chr5 9823571 9823929 -189806221 + MSTA LTR MaLR 1 428 0 199 321 75 22 chr5 9824012 9824146 -189806004 - MIR SINE MIR -3 259 119 399 41 0 0 chr5 9824390 9824439 -189805711 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 1860 142 17 3 chr5 9824585 9824874 -189805276 - AluSx SINE Alu -19 293 1 441 138 15 0 chr5 9824918 9824983 -189805167 + AluS SINE Alu 2 67 -246 3820 64 2 0 chr5 9825678 9826133 -189804017 - L1PA7 LINE L1 -4 6150 5695 464 104 0 0 chr5 9826138 9826205 -189803945 - L1P LINE L1 -3167 2979 2913 296 348 65 0 chr5 9826568 9826706 -189803444 + MIR SINE MIR 87 233 -29 261 57 0 0 chr5 9828569 9828604 -189801546 + (TG)n Simple_repeat Simple_repeat 1 35 0 1151 261 118 52 chr5 9831190 9831672 -189798478 - MER90 LTR ERV1 -9 605 92 4155 33 0 0 chr5 9832068 9832556 -189797594 - L1PA2 LINE L1 -1219 4927 4440 8375 12 0 2 chr5 9832556 9833780 -189796370 + L1PA2 LINE L1 4934 6155 0 2139 111 0 10 chr5 9833801 9834098 -189796052 + AluSg SINE Alu 1 294 -16 304 287 42 48 chr5 9834974 9835141 -189795009 + L2 LINE L2 2834 2999 -273 1662 237 121 29 chr5 9835872 9836328 -189793822 - MLT2B1 LTR ERVL -10 510 13 767 188 227 0 chr5 9836469 9836645 -189793505 - MER20 DNA MER1_type -3 216 1 1091 242 81 20 chr5 9836653 9836950 -189793200 + MER119 DNA MER1_type 1 315 -268 527 269 15 0 chr5 9836984 9837118 -189793032 + MER119 DNA MER1_type 448 583 0 1838 127 3 45 chr5 9837682 9838018 -189792132 + AluSx SINE Alu 3 326 0 903 291 107 46 chr5 9838305 9838830 -189791320 + MLT1G1 LTR MaLR 3 559 -36 624 259 74 54 chr5 9838962 9839259 -189790891 - LTR33A LTR ERVL 0 523 221 1720 102 33 126 chr5 9839262 9839596 -189790554 - AluSq SINE Alu -10 303 1 1469 341 26 39 chr5 9840833 9841294 -189788856 + L1PA14 LINE L1 5705 6159 -2 247 366 0 0 chr5 9841685 9841786 -189788364 + L2 LINE L2 3208 3308 -5 415 325 33 4 chr5 9842859 9843045 -189787105 - MLT1J2 LTR MaLR -15 534 347 434 316 26 0 chr5 9843664 9843819 -189786331 - MLT1J2 LTR MaLR -187 263 105 582 277 15 42 chr5 9843832 9844092 -189786058 + L1ME3A LINE L1 5917 6169 -1 1163 159 8 41 chr5 9844110 9844279 -189785871 + L1ME LINE L1 5192 5352 -814 1340 193 77 11 chr5 9844279 9844553 -189785597 + AluJb SINE Alu 1 292 -20 1163 159 8 41 chr5 9844553 9844668 -189785482 + L1ME LINE L1 5352 5469 -697 24 32 0 0 chr5 9845588 9845619 -189784531 + AT_rich Low_complexity Low_complexity 1 31 0 1982 141 63 30 chr5 9847130 9847493 -189782657 - THE1C LTR MaLR 0 375 1 1622 178 57 48 chr5 9847922 9847944 -189782206 + MLT1A2 LTR MaLR 1 21 -353 2665 136 30 28 chr5 9847944 9848370 -189781780 + MSTA LTR MaLR 1 427 -1 1622 178 57 48 chr5 9848370 9848437 -189781713 + MLT1A2 LTR MaLR 21 86 -288 1498 196 94 24 chr5 9848437 9848778 -189781372 - MLT1A1 LTR MaLR 0 365 1 1622 178 57 48 chr5 9848778 9849058 -189781092 + MLT1A2 LTR MaLR 86 374 0 1450 170 0 8 chr5 9850281 9850528 -189779622 - L1MA10 LINE L1 -2 6332 6088 1042 156 50 6 chr5 9850529 9850708 -189779442 + MSTA LTR MaLR 1 187 -241 843 83 0 0 chr5 9850717 9850826 -189779324 + MSTA LTR MaLR 320 428 0 2309 200 32 6 chr5 9850845 9851344 -189778806 - L1MB1 LINE L1 -119 6070 5559 299 188 41 18 chr5 9852094 9852264 -189777886 + (TG)n Simple_repeat Simple_repeat 1 174 0 556 91 27 59 chr5 9852300 9852486 -189777664 + (TG)n Simple_repeat Simple_repeat 1 180 0 281 184 29 29 chr5 9852597 9852771 -189777379 + (TG)n Simple_repeat Simple_repeat 1 174 0 482 155 39 13 chr5 9852790 9853026 -189777124 + (TG)n Simple_repeat Simple_repeat 1 242 0 536 170 7 85 chr5 9854255 9854325 -189775825 + MLT1D LTR MaLR 376 431 -74 2011 160 0 0 chr5 9854325 9854637 -189775513 - AluSx SINE Alu 0 312 1 536 170 7 85 chr5 9854637 9854707 -189775443 + MLT1D LTR MaLR 431 505 0 2794 114 18 5 chr5 9855289 9855727 -189774423 + L1PB2 LINE L1 5705 6148 -3 19769 58 0 7 chr5 9856928 9860281 -189769869 + L1PA6 LINE L1 2805 6148 -6 661 154 8 8 chr5 9860342 9860472 -189769678 + CT-rich Low_complexity Low_complexity 3 132 0 21 36 0 0 chr5 9861681 9861709 -189768441 + AT_rich Low_complexity Low_complexity 1 28 0 499 277 114 42 chr5 9862616 9862923 -189767227 - LTR16B LTR ERVL -135 329 1 542 261 0 0 chr5 9864081 9864200 -189765950 + Tigger3(Golem) DNA MER2_type 2 120 -2909 1188 227 109 91 chr5 9866278 9866904 -189763246 - MLT1E1 LTR MaLR 0 654 18 452 282 18 72 chr5 9867018 9867295 -189762855 - MLT1E1-int LTR MaLR -141 1230 969 1961 79 4 0 chr5 9867305 9867559 -189762591 - AluY SINE Alu 0 311 57 259 266 21 63 chr5 9867936 9868079 -189762071 + MER65B LTR ERV1 1 137 -394 2357 52 10 0 chr5 9869211 9869499 -189760651 + AluY SINE Alu 1 291 -20 365 0 22 0 chr5 9869508 9869553 -189760597 + (TAAAA)n Simple_repeat Simple_repeat 1 46 0 3123 169 53 46 chr5 9870061 9871040 -189759110 - L1MA8 LINE L1 -684 5607 4634 2406 181 45 22 chr5 9871041 9871643 -189758507 + L1MA8 LINE L1 5617 6232 -59 22 56 0 0 chr5 9872299 9872335 -189757815 + AT_rich Low_complexity Low_complexity 1 36 0 429 316 49 49 chr5 9872994 9873238 -189756912 - MIR SINE MIR 0 262 19 247 274 62 84 chr5 9873429 9873608 -189756542 + HAL1 LINE L1 2 176 -2331 692 285 92 15 chr5 9873642 9874108 -189756042 - MER20B DNA MER1_type -1 782 281 313 278 62 0 chr5 9874170 9874267 -189755883 + HAL1 LINE L1 1548 1650 -857 2342 103 0 10 chr5 9874781 9875092 -189755058 - AluSq SINE Alu -5 308 1 1216 233 11 32 chr5 9875301 9875649 -189754501 + MLT2C1 LTR ERVL 3 343 -54 813 105 29 6 chr5 9875649 9875821 -189754329 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 566 244 76 0 chr5 9877311 9877483 -189752667 - MER5A DNA MER1_type -3 186 2 21 57 0 0 chr5 9877873 9877908 -189752242 + AT_rich Low_complexity Low_complexity 1 35 0 228 379 9 26 chr5 9878627 9878743 -189751407 - MER5A DNA MER1_type -9 180 67 2240 271 52 11 chr5 9878822 9879490 -189750660 + L1M1 LINE L1 17 712 -6853 1742 135 14 14 chr5 9879484 9879781 -189750369 + L1P3 LINE L1 1 297 -5578 * 5444 126 24 27 chr5 9879883 9880902 -189749248 + L1P3 LINE L1 271 1312 -4734 14140 169 45 62 chr5 9880965 9881038 -189749112 + L1M1 LINE L1 700 773 -6792 5490 109 5 6 chr5 9881038 9881819 -189748331 - LTR17 LTR ERV1 0 780 1 14140 169 45 62 chr5 9881819 9886648 -189743502 + L1M1 LINE L1 773 5536 -2029 330 265 155 22 chr5 9887126 9887307 -189742843 + L1MC4a LINE L1 7510 7887 -108 22 0 0 0 chr5 9887413 9887435 -189742715 + AT_rich Low_complexity Low_complexity 1 22 0 210 143 0 0 chr5 9888771 9888806 -189741344 + (TTCCC)n Simple_repeat Simple_repeat 1 35 0 323 292 19 43 chr5 9889365 9889574 -189740576 + MLT1J1 LTR MaLR 234 437 -9 491 294 11 39 chr5 9890397 9890577 -189739573 - L2 LINE L2 -628 2686 2512 991 288 92 22 chr5 9890817 9891320 -189738830 + L2 LINE L2 2394 2931 -383 337 302 90 54 chr5 9891340 9891562 -189738588 + L2 LINE L2 3075 3304 -9 209 182 0 65 chr5 9891859 9891936 -189738214 + T-rich Low_complexity Low_complexity 3 74 0 387 41 0 0 chr5 9892455 9892504 -189737646 + (CA)n Simple_repeat Simple_repeat 2 50 0 242 253 13 13 chr5 9894327 9894402 -189735748 + MLT1L LTR MaLR 1 75 -540 369 255 54 88 chr5 9894544 9894783 -189735367 + MLT1J LTR MaLR 228 458 -53 317 289 33 25 chr5 9897067 9897188 -189732962 + L1MCb LINE L1 449 570 -5475 406 248 32 16 chr5 9897275 9897400 -189732750 + L1MCb LINE L1 570 696 -5349 1582 255 47 55 chr5 9897402 9898297 -189731853 + L1M4 LINE L1 2645 3532 -2614 1162 231 3 60 chr5 9898314 9898613 -189731537 - AluJb SINE Alu -30 282 1 637 186 87 50 chr5 9898738 9898899 -189731251 - MER5A DNA MER1_type -5 184 18 312 193 84 0 chr5 9899216 9899299 -189730851 + MLT1J LTR MaLR 526 615 -9 210 288 0 0 chr5 9900130 9900189 -189729961 + GA-rich Low_complexity Low_complexity 1 59 0 183 360 44 9 chr5 9905181 9905295 -189724855 - L2 LINE L2 -640 2674 2557 21 36 0 0 chr5 9906564 9906592 -189723558 + AT_rich Low_complexity Low_complexity 1 28 0 2486 51 0 3 chr5 9907157 9907450 -189722700 + AluY SINE Alu 1 292 -19 2331 159 4 50 chr5 9907856 9908320 -189721830 - MER65A LTR ERV1 0 445 3 1100 267 51 41 chr5 9910703 9911115 -189719035 + LTR40a LTR ERVL 104 519 0 878 238 0 15 chr5 9911790 9911992 -189718158 + L1PA16 LINE L1 2 200 -6587 369 309 47 73 chr5 9911994 9912295 -189717855 + L1PA16 LINE L1 434 726 -6061 4838 248 20 25 chr5 9912477 9915322 -189714828 + L1PA16 LINE L1 1323 4136 -2661 1530 177 57 38 chr5 9915339 9915707 -189714443 - THE1C LTR MaLR 0 375 1 5971 162 14 54 chr5 9915707 9916982 -189713168 - THE1C-int LTR MaLR 0 1580 357 4794 167 11 9 chr5 9917093 9918454 -189711696 + L1PA16 LINE L1 5435 6811 -6 253 288 0 0 chr5 9919169 9919249 -189710901 - MER65A-int LTR ERV1 -134 6667 6588 1699 216 17 11 chr5 9919936 9920292 -189709858 + MLT1A1 LTR MaLR 4 361 -4 835 328 30 7 chr5 9920297 9920730 -189709420 + L1MEc LINE L1 292 734 -5873 300 269 35 28 chr5 9923042 9923187 -189706963 + LTR16C LTR ERVL 344 489 -2 346 270 135 24 chr5 9923307 9923433 -189706717 - MER91C DNA MER1_type 0 140 1 200 299 75 0 chr5 9924469 9924536 -189705614 - MIR SINE MIR -81 181 110 25 31 0 0 chr5 9925210 9925242 -189704908 + AT_rich Low_complexity Low_complexity 1 32 0 257 208 14 0 chr5 9925586 9925658 -189704492 + (TA)n Simple_repeat Simple_repeat 2 74 0 359 243 29 71 chr5 9926755 9926965 -189703185 + L1MA10 LINE L1 6134 6334 0 506 218 34 58 chr5 9927713 9927919 -189702231 + L1MA10 LINE L1 6134 6334 0 2031 163 0 0 chr5 9928295 9928589 -189701561 + AluSx SINE Alu 1 294 -18 2065 144 0 22 chr5 9928641 9928960 -189701190 + AluSx SINE Alu 1 312 0 1281 147 77 18 chr5 9929170 9929442 -189700708 - MER46B DNA MER2_type -73 163 1 218 222 34 34 chr5 9931093 9931210 -189698940 + (TA)n Simple_repeat Simple_repeat 2 118 0 21 0 0 0 chr5 9931494 9931515 -189698635 + AT_rich Low_complexity Low_complexity 1 21 0 443 127 0 0 chr5 9931601 9931672 -189698478 + MADE1 DNA Mariner 1 71 -9 1870 100 82 0 chr5 9931861 9932141 -189698009 + AluSp SINE Alu 1 303 -10 2277 47 22 0 chr5 9932464 9932815 -189697335 + AluY SINE Alu 5 311 0 999 260 32 63 chr5 9934902 9935455 -189694695 + Charlie2a DNA MER1_type 1546 2081 -781 27 29 0 0 chr5 9935468 9935502 -189694648 + AT_rich Low_complexity Low_complexity 1 34 0 227 191 16 16 chr5 9935540 9935603 -189694547 + Charlie2a DNA MER1_type 2109 2171 -691 836 261 89 65 chr5 9935671 9936463 -189693687 + L1MEc LINE L1 1275 2046 -4380 2329 94 3 0 chr5 9936463 9936761 -189693389 - AluSp SINE Alu -13 300 2 836 261 89 65 chr5 9936761 9937390 -189692760 + L1MEc LINE L1 2046 2868 -3558 242 122 0 20 chr5 9937392 9937441 -189692709 + (GGA)n Simple_repeat Simple_repeat 3 50 0 1093 256 0 9 chr5 9937441 9937762 -189692388 + L1MEc LINE L1 2878 3195 -3231 955 142 17 94 chr5 9937820 9938090 -189692060 + L1M1 LINE L1 5223 5474 -743 21 36 0 0 chr5 9938458 9938486 -189691664 + AT_rich Low_complexity Low_complexity 1 28 0 1558 152 194 8 chr5 9939024 9939380 -189690770 + MSTA LTR MaLR 7 428 0 1863 162 72 17 chr5 9939594 9939939 -189690211 - THE1B LTR MaLR 0 364 1 23 92 0 0 chr5 9940699 9940764 -189689386 + AT_rich Low_complexity Low_complexity 1 65 0 7716 17 3 0 chr5 9940993 9942350 -189687800 + L1PA3 LINE L1 4827 6187 0 22 0 0 0 chr5 9943313 9943335 -189686815 + AT_rich Low_complexity Low_complexity 1 22 0 407 136 0 0 chr5 9943402 9943468 -189686682 - Alu SINE Alu -12 300 235 234 0 0 0 chr5 9944229 9944255 -189685895 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 1490 196 54 4 chr5 9944261 9944658 -189685492 + L1ME LINE L1 5176 5589 -744 939 234 20 16 chr5 9944670 9944914 -189685236 - L1PB4 LINE L1 -14 6142 5898 233 294 0 78 chr5 9945779 9945881 -189684269 + L2 LINE L2 3196 3289 -24 392 304 155 19 chr5 9945904 9946111 -189684039 + MIR SINE MIR 28 262 0 350 306 22 55 chr5 9948273 9948456 -189681694 - MER5B DNA MER1_type 0 178 2 281 231 128 26 chr5 9948924 9949041 -189681109 + LTR16A LTR ERVL 320 448 -2 2096 137 23 0 chr5 9950566 9950908 -189679242 - L1PA14 LINE L1 0 6161 5812 274 256 0 0 chr5 9951569 9951651 -189678499 + L1ME LINE L1 5674 5755 -415 27 29 0 0 chr5 9952013 9952047 -189678103 + AT_rich Low_complexity Low_complexity 1 34 0 2531 107 28 0 chr5 9953074 9953428 -189676722 + THE1B LTR MaLR 1 364 0 552 173 29 7 chr5 9955944 9956083 -189674067 + GA-rich Low_complexity Low_complexity 3 144 0 4734 234 29 8 chr5 9956443 9957821 -189672329 + L1M4 LINE L1 3631 5037 -1109 1930 167 3 3 chr5 9957995 9958300 -189671850 - AluSx SINE Alu -7 305 1 446 215 37 0 chr5 9960168 9960275 -189669875 + L1MA4 LINE L1 5970 6080 -220 281 26 26 0 chr5 9961015 9961053 -189669097 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 2589 133 30 0 chr5 9962052 9962451 -189667699 - LTR57 LTR ERVL 0 411 1 2044 121 0 39 chr5 9963076 9963382 -189666768 - AluY SINE Alu -15 296 3 332 227 114 23 chr5 9964149 9964281 -189665869 + L2 LINE L2 3112 3255 -58 324 343 112 12 chr5 9964328 9964570 -189665580 + L2 LINE L2 1990 2255 -1059 2295 87 0 10 chr5 9965044 9965355 -189664795 - AluY SINE Alu -3 308 1 488 302 19 6 chr5 9966503 9966662 -189663488 + MIR SINE MIR 60 220 -42 460 215 56 0 chr5 9967035 9967142 -189663008 - MER68 LTR ERV1 0 562 450 6196 205 28 5 chr5 9967143 9968643 -189661507 - L1 LINE L1 -1135 5011 3478 27 29 0 0 chr5 9969391 9969425 -189660725 + AT_rich Low_complexity Low_complexity 1 34 0 198 326 33 33 chr5 9971919 9972011 -189658139 - L2 LINE L2 -19 3253 3162 287 284 53 110 chr5 9972371 9972653 -189657497 + L2 LINE L2 2988 3253 -19 889 177 7 131 chr5 9974272 9974555 -189655595 - MLT1A1 LTR MaLR -2 363 116 12122 28 4 0 chr5 9974679 9976872 -189653278 - L1PA3 LINE L1 -70 6085 3883 22 56 0 0 chr5 9977222 9977258 -189652892 + AT_rich Low_complexity Low_complexity 1 36 0 2408 63 3 0 chr5 9977757 9978057 -189652093 - AluY SINE Alu -10 301 1 380 213 8 0 chr5 9978659 9978781 -189651369 + (TA)n Simple_repeat Simple_repeat 1 123 0 2261 76 3 0 chr5 9980225 9980526 -189649624 - AluY SINE Alu -9 302 1 226 279 36 0 chr5 9980761 9980872 -189649278 - L1ME LINE L1 -330 5791 5677 237 281 21 42 chr5 9981122 9981218 -189648932 + L1MDb LINE L1 332 425 -6004 438 144 89 0 chr5 9981399 9981489 -189648661 + MER4A LTR ERV1 1 98 -566 1556 139 25 68 chr5 9981490 9981850 -189648300 + MER4A LTR ERV1 262 664 0 269 136 0 0 chr5 9981934 9981978 -189648172 - L1MB1 LINE L1 0 6168 6125 1905 229 69 9 chr5 9982201 9982734 -189647416 - MER34B LTR ERV1 0 565 1 1241 173 121 72 chr5 9982893 9983322 -189646828 + LTR7 LTR ERV1 1 450 0 3281 217 62 72 chr5 9983322 9985379 -189644771 + HERVH LTR ERV1 1 2047 -5666 363 191 0 0 chr5 9985379 9985442 -189644708 + MER4A LTR ERV1 378 440 -224 506 310 77 75 chr5 9986004 9986443 -189643707 + L1MD3 LINE L1 2 441 -5604 738 257 58 56 chr5 9987042 9987455 -189642695 + L1MD3 LINE L1 745 1158 -4888 * 1274 80 0 45 chr5 9987445 9987592 -189642558 + L1P5 LINE L1 5592 5729 -422 1908 134 7 20 chr5 9987592 9987890 -189642260 + AluSq SINE Alu 1 294 -19 1274 80 0 45 chr5 9987890 9987941 -189642209 + L1P5 LINE L1 5729 5781 -370 336 48 0 0 chr5 9987944 9987986 -189642164 + (TG)n Simple_repeat Simple_repeat 2 43 0 401 231 56 42 chr5 9988041 9988184 -189641966 + L1MD3 LINE L1 1969 2113 -4451 1289 293 57 18 chr5 9988246 9989138 -189641012 + L1MD3 LINE L1 3609 4535 -2029 679 255 64 85 chr5 9989145 9989521 -189640629 + MSTD LTR MaLR 6 373 -23 2779 256 99 37 chr5 9989540 9989719 -189640431 + L1MD3 LINE L1 4613 4779 -1785 2062 144 3 3 chr5 9989719 9990025 -189640125 + AluSc SINE Alu 1 306 -3 2779 256 99 37 chr5 9990025 9992143 -189638007 + L1MD3 LINE L1 4779 5469 -1095 297 0 0 0 chr5 9992143 9992176 -189637974 + (CA)n Simple_repeat Simple_repeat 2 34 0 2779 256 99 37 chr5 9992176 9992547 -189637603 + L1MD3 LINE L1 5469 5815 -749 1594 223 43 28 chr5 9992877 9993273 -189636877 - L1MD1 LINE L1 -6 6236 5847 2483 60 0 0 chr5 9993273 9993574 -189636576 - AluY SINE Alu -10 301 1 1594 223 43 28 chr5 9993574 9994281 -189635869 - L1MD1 LINE L1 -395 5847 4968 4548 227 62 49 chr5 9994335 9996048 -189634102 + L1MDb LINE L1 8 1734 -4672 1738 162 68 31 chr5 9996088 9996287 -189633863 - THE1B LTR MaLR 0 364 145 2183 131 0 0 chr5 9996287 9996585 -189633565 - AluSq SINE Alu -15 298 1 1738 162 68 31 chr5 9996585 9996736 -189633414 - THE1B LTR MaLR -219 145 1 532 224 0 9 chr5 9996736 9996852 -189633298 - L1MDb LINE L1 -6252 157 43 452 283 34 34 chr5 9997146 9997379 -189632771 + L1ME1 LINE L1 5928 6160 -6 2183 111 7 3 chr5 9997481 9997778 -189632372 - AluSp SINE Alu -4 309 12 792 203 154 24 chr5 9997847 9998092 -189632058 - MLT1B LTR MaLR 0 390 114 338 183 0 0 chr5 9998092 9998152 -189631998 - MER52A LTR ERV1 0 1755 1696 3393 227 48 43 chr5 9998159 9999292 -189630858 - MER52A LTR ERV1 -562 1193 56 678 158 201 11 chr5 10000371 10000555 -189629595 - MER90 LTR ERV1 -14 600 382 744 241 43 35 chr5 10000569 10000826 -189629324 - MER90 LTR ERV1 -310 265 7 2099 121 0 0 chr5 10000916 10001227 -189628923 - AluSc SINE Alu 0 311 1 2848 7 0 0 chr5 10001345 10001652 -189628498 + AluYa5 SINE Alu 1 307 -4 22 0 0 0 chr5 10002979 10003001 -189627149 + AT_rich Low_complexity Low_complexity 1 22 0 2018 114 0 0 chr5 10003098 10003369 -189626781 - AluSc SINE Alu -4 305 35 22 0 0 0 chr5 10003886 10003908 -189626242 + AT_rich Low_complexity Low_complexity 1 22 0 2870 94 18 16 chr5 10003976 10004365 -189625785 + L1PB2 LINE L1 5711 6103 -48 2326 124 34 8 chr5 10004365 10004720 -189625430 - THE1B LTR MaLR 0 364 1 2870 94 18 16 chr5 10004720 10004768 -189625382 + L1PB2 LINE L1 6103 6149 -2 349 210 40 30 chr5 10005224 10005324 -189624826 + MER94 DNA DNA 1 101 -33 609 336 119 30 chr5 10007207 10007698 -189622452 - L2 LINE L2 -19 3294 2747 1523 154 67 83 chr5 10007698 10008133 -189622017 - MSTB1 LTR MaLR -4 428 1 609 336 119 30 chr5 10008133 10008163 -189621987 - L2 LINE L2 -566 2747 2721 513 167 0 0 chr5 10010083 10010185 -189619965 + (TGGA)n Simple_repeat Simple_repeat 1 102 0 272 357 43 47 chr5 10010670 10010947 -189619203 - L2 LINE L2 -1297 2017 1742 1069 140 57 83 chr5 10011956 10012220 -189617930 - THE1C LTR MaLR -118 257 1 7517 153 16 8 chr5 10012424 10013745 -189616405 + Tigger4(Zombi) DNA MER2_type 103 1434 -1297 1247 137 155 161 chr5 10013745 10014287 -189615863 - MER4A LTR ERV1 0 664 126 311 111 0 19 chr5 10014297 10014351 -189615799 + (TTTC)n Simple_repeat Simple_repeat 1 53 0 783 97 8 8 chr5 10014351 10014475 -189615675 - MER4A LTR ERV1 -540 124 1 7365 135 20 9 chr5 10014487 10015762 -189614388 + Tigger4(Zombi) DNA MER2_type 1443 2730 -1 727 204 151 70 chr5 10015855 10016212 -189613938 - MLT1B LTR MaLR -4 386 1 656 238 0 0 chr5 10016317 10016439 -189613711 - FLAM_C SINE Alu -19 124 3 1926 178 21 40 chr5 10016833 10017255 -189612895 - MLT2D LTR ERVL 0 414 1 808 224 24 0 chr5 10018066 10018231 -189611919 - FRAM SINE Alu -10 166 1 2493 60 0 0 chr5 10018286 10018584 -189611566 - AluY SINE Alu -13 298 1 1113 292 84 11 chr5 10018693 10019159 -189610991 + ERVL LTR ERVL 1803 2302 -3462 1559 282 71 33 chr5 10019226 10020531 -189609619 + ERVL LTR ERVL 2416 3848 -1916 212 195 39 104 chr5 10021136 10021213 -189608937 - MIR3 SINE MIR -36 172 101 309 261 268 0 chr5 10021297 10021439 -189608711 - MIR SINE MIR -11 251 72 5564 156 26 3 chr5 10022577 10022635 -189607515 + Tigger1 DNA MER2_type 1 56 -2362 195 42 0 0 chr5 10022635 10022659 -189607491 + (TA)n Simple_repeat Simple_repeat 1 24 0 5564 156 26 3 chr5 10022659 10023602 -189606548 + Tigger1 DNA MER2_type 56 1025 -1393 509 146 0 0 chr5 10023600 10023682 -189606468 + Tigger1 DNA MER2_type 2337 2418 0 * 2299 117 3 0 chr5 10023754 10024063 -189606087 - AluSg SINE Alu 0 310 1 1881 129 161 13 chr5 10024382 10024755 -189605395 + MSTA LTR MaLR 1 428 0 199 229 169 36 chr5 10025609 10025692 -189604458 + L2 LINE L2 3187 3280 -33 * 349 297 99 56 chr5 10025687 10025919 -189604231 - MIR SINE MIR -2 260 19 319 326 58 7 chr5 10027773 10027911 -189602239 - MIR SINE MIR -110 152 8 24 32 0 0 chr5 10028177 10028208 -189601942 + AT_rich Low_complexity Low_complexity 1 31 0 334 346 100 4 chr5 10028364 10028604 -189601546 - L2 LINE L2 -431 2883 2621 22 70 0 0 chr5 10029270 10029313 -189600837 + AT_rich Low_complexity Low_complexity 1 43 0 354 284 93 19 chr5 10030734 10030896 -189599254 + MLT1I LTR MaLR 226 399 -10 449 211 159 9 chr5 10031788 10032020 -189598130 + MER97a DNA MER1_type? 586 852 -42 747 248 96 11 chr5 10032042 10032324 -189597826 - L2 LINE L2 -1197 2117 1812 1813 148 34 14 chr5 10032364 10032661 -189597489 + AluJb SINE Alu 1 303 -9 22 0 0 0 chr5 10032775 10032797 -189597353 + AT_rich Low_complexity Low_complexity 1 22 0 622 258 148 9 chr5 10033030 10033259 -189596891 + MIR SINE MIR 2 262 0 2366 66 0 3 chr5 10033284 10033572 -189596578 - AluY SINE Alu -24 287 1 1261 277 124 15 chr5 10034529 10035070 -189595080 + MER90 LTR ERV1 11 573 -2 489 142 242 8 chr5 10035138 10035258 -189594892 - MER4C LTR ERV1 -18 447 300 1104 148 136 47 chr5 10035390 10035707 -189594443 - MER4A LTR ERV1 -319 345 1 521 306 0 8 chr5 10035711 10035845 -189594305 - MIR SINE MIR -110 152 20 531 283 98 4 chr5 10036199 10036443 -189593707 - L1MC4 LINE L1 -144 7898 7632 515 267 0 0 chr5 10036517 10036652 -189593498 - L1MC4a LINE L1 -514 7294 7160 1336 219 52 11 chr5 10036655 10037021 -189593129 - L1MC4 LINE L1 -963 7079 6699 353 311 96 33 chr5 10037334 10037762 -189592388 - L1ME3A LINE L1 -312 5858 5404 431 304 43 58 chr5 10037815 10038469 -189591681 - L1ME3A LINE L1 -1441 4705 4062 2386 127 19 3 chr5 10038490 10038859 -189591291 - THE1C LTR MaLR 0 375 1 9261 127 40 41 chr5 10038859 10040441 -189589709 - THE1C-int LTR MaLR 0 1580 1 2038 155 11 6 chr5 10040441 10040796 -189589354 - THE1C LTR MaLR 0 375 19 239 321 36 0 chr5 10040923 10041060 -189589090 - L1ME3A LINE L1 -2502 3644 3503 1422 210 0 11 chr5 10041074 10041350 -189588800 + MER68 LTR ERV1 290 562 0 645 296 68 27 chr5 10041354 10041722 -189588428 - L1ME3A LINE L1 -2730 3416 3034 403 272 5 60 chr5 10041880 10042064 -189588086 - MER52A LTR ERV1 0 1755 1582 * 924 234 17 78 chr5 10042044 10042748 -189587402 - MER52A LTR ERV1 -147 895 283 9370 122 18 7 chr5 10042753 10044218 -189585932 - MER52-int LTR ERV1 0 7091 5611 202 305 0 37 chr5 10044570 10044652 -189585498 - MIR SINE MIR -31 231 153 207 161 0 0 chr5 10045343 10045374 -189584776 + (CAT)n Simple_repeat Simple_repeat 3 33 0 387 363 29 29 chr5 10045447 10045618 -189584532 + MIR3 SINE MIR 16 186 -22 2174 112 23 3 chr5 10046219 10046552 -189583598 + AluSg SINE Alu 1 339 0 21 0 0 0 chr5 10046736 10046757 -189583393 + AT_rich Low_complexity Low_complexity 1 21 0 1313 224 46 53 chr5 10047063 10047113 -189583037 + MER57B LTR ERV1 1 50 -384 2332 129 8 21 chr5 10047113 10047493 -189582657 - THE1C LTR MaLR 0 375 1 1313 224 46 53 chr5 10047493 10047874 -189582276 + MER57B LTR ERV1 50 429 -5 369 277 44 38 chr5 10047896 10048055 -189582095 + MER57B-int LTR ERV1 3 162 -7375 2544 69 0 0 chr5 10048233 10048537 -189581613 - AluY SINE Alu -7 304 1 23 0 0 0 chr5 10048651 10048674 -189581476 + AT_rich Low_complexity Low_complexity 1 23 0 2023 142 7 0 chr5 10048674 10048969 -189581181 - AluSx SINE Alu -15 297 1 207 0 0 0 chr5 10049703 10049726 -189580424 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 265 315 0 27 chr5 10050951 10051062 -189579088 + MER57-int LTR ERV1 3304 3411 -4345 254 359 0 0 chr5 10052373 10052451 -189577699 + MER57-int LTR ERV1 3784 3861 -2940 1410 255 17 43 chr5 10052529 10053012 -189577138 + MER57-int LTR ERV1 5277 5746 -1791 663 358 17 33 chr5 10052983 10053675 -189576475 + MER57-int LTR ERV1 2093 2773 -1874 * 1681 144 157 82 chr5 10053678 10054054 -189576096 - MER4A LTR ERV1 0 664 261 585 143 10 10 chr5 10054054 10054152 -189575998 - MER4A LTR ERV1 -566 98 1 762 220 7 0 chr5 10054166 10054307 -189575843 + MER57-int LTR ERV1 5953 6094 -1443 233 181 0 69 chr5 10054332 10054404 -189575746 - LTR64 LTR ERVK -2 556 490 6479 157 15 7 chr5 10054902 10055982 -189574168 + Tigger2 DNA MER2_type 1630 2717 -1 22 0 0 0 chr5 10057081 10057103 -189573047 + AT_rich Low_complexity Low_complexity 1 22 0 2146 136 95 3 chr5 10057181 10057662 -189572488 - LTR49 LTR ERV1 0 595 1 3696 174 13 14 chr5 10057763 10058469 -189571681 + MER67C LTR ERV1 2 706 -4 2825 200 20 75 chr5 10058592 10059323 -189570827 - LTR8 LTR ERV1 0 691 1 1753 168 10 30 chr5 10059515 10059819 -189570331 - AluJb SINE Alu -12 300 3 279 309 109 48 chr5 10060314 10060479 -189569671 - MIR SINE MIR -81 181 7 4823 172 27 5 chr5 10061075 10061958 -189568192 - MER4D LTR ERV1 0 903 1 23 0 0 0 chr5 10063771 10063794 -189566356 + AT_rich Low_complexity Low_complexity 1 23 0 196 220 20 0 chr5 10064246 10064296 -189565854 + MER5B DNA MER1_type 1 51 -127 3245 245 94 42 chr5 10064824 10065265 -189564885 + L1M3e LINE L1 1383 1799 -5307 1591 176 70 25 chr5 10065265 10065624 -189564526 - THE1C LTR MaLR 0 375 1 3245 245 94 42 chr5 10065624 10065765 -189564385 + L1M3e LINE L1 1799 1931 -5175 408 20 0 0 chr5 10065765 10065814 -189564336 + (CA)n Simple_repeat Simple_repeat 2 50 0 3245 245 94 42 chr5 10065814 10068315 -189561835 + L1M3e LINE L1 1931 4290 -2816 263 259 0 0 chr5 10068316 10068370 -189561780 + Tigger7 DNA MER2_type 2 55 -2432 * 764 161 0 36 chr5 10068365 10068533 -189561617 + Tigger7 DNA MER2_type 2234 2395 -96 2180 104 0 0 chr5 10068604 10068919 -189561231 + AluY SINE Alu 1 315 0 2046 180 26 0 chr5 10068978 10069356 -189560794 + MLT1B LTR MaLR 3 390 0 375 288 101 14 chr5 10070710 10070849 -189559301 - MIR SINE MIR -17 245 95 192 318 45 27 chr5 10071010 10071120 -189559030 + L2 LINE L2 3161 3272 0 2057 158 97 8 chr5 10072168 10072561 -189557589 - MSTA LTR MaLR 0 428 1 724 260 29 0 chr5 10073315 10073488 -189556662 + MER45A DNA AcHobo 1 178 0 2295 137 11 8 chr5 10075048 10075406 -189554744 + THE1B LTR MaLR 1 359 -5 2251 85 0 53 chr5 10075406 10075724 -189554426 + AluSp SINE Alu 1 301 -12 207 0 0 0 chr5 10076652 10076675 -189553475 + (T)n Simple_repeat Simple_repeat 1 23 0 335 255 32 21 chr5 10076737 10076831 -189553319 - MLT1L LTR MaLR -210 405 311 587 353 39 24 chr5 10077003 10077337 -189552813 - MLT1J LTR MaLR -156 355 17 819 231 29 0 chr5 10077520 10077693 -189552457 + MER45A DNA AcHobo 1 178 0 315 346 12 0 chr5 10078174 10078336 -189551814 + A-rich Low_complexity Low_complexity 3 166 0 22 70 0 0 chr5 10078629 10078672 -189551478 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr5 10078852 10078877 -189551273 + AT_rich Low_complexity Low_complexity 1 25 0 9571 121 2 1 chr5 10078884 10081143 -189549007 - L1PA8 LINE L1 -3 6169 3908 2060 146 132 5 chr5 10081433 10081811 -189548339 - MSTA LTR MaLR 0 428 3 180 0 0 0 chr5 10082222 10082242 -189547908 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 3486 80 4 6 chr5 10082242 10082718 -189547432 - L1PA8 LINE L1 -23 6149 5675 213 290 0 10 chr5 10083213 10083313 -189546837 + (TTG)n Simple_repeat Simple_repeat 2 100 0 246 136 0 0 chr5 10083321 10083365 -189546785 + (TGG)n Simple_repeat Simple_repeat 1 44 0 266 329 129 34 chr5 10083669 10083981 -189546169 + L2 LINE L2 2729 3070 -243 1246 226 104 44 chr5 10084573 10085100 -189545050 - L1MC4 LINE L1 -1 8041 7483 285 257 14 0 chr5 10085091 10085165 -189544985 - L1MC4a LINE L1 -1383 6425 6351 * 1228 278 33 14 chr5 10085167 10085588 -189544562 - L1ME2 LINE L1 -9 6155 5727 459 228 63 16 chr5 10085588 10085715 -189544435 - MLT2F LTR ERVL 0 663 531 3739 164 50 10 chr5 10085715 10086396 -189543754 - L1P3 LINE L1 -5733 728 21 1375 136 80 31 chr5 10086419 10086705 -189543445 - THE1C LTR MaLR -75 300 1 34 84 0 0 chr5 10086982 10087065 -189543085 + AT_rich Low_complexity Low_complexity 1 83 0 315 0 0 0 chr5 10087099 10087134 -189543016 + (TG)n Simple_repeat Simple_repeat 2 36 0 1292 128 0 0 chr5 10087306 10087493 -189542657 - AluSg/x SINE Alu 0 312 126 22 35 0 0 chr5 10088136 10088165 -189541985 + AT_rich Low_complexity Low_complexity 1 29 0 2650 35 0 10 chr5 10088227 10088541 -189541609 - AluY SINE Alu 0 311 1 24 32 0 0 chr5 10088720 10088751 -189541399 + AT_rich Low_complexity Low_complexity 1 31 0 367 215 99 25 chr5 10088877 10088998 -189541152 + MER5A DNA MER1_type 59 188 -1 23 0 0 0 chr5 10089449 10089472 -189540678 + AT_rich Low_complexity Low_complexity 1 23 0 267 214 0 18 chr5 10089559 10089615 -189540535 + Tigger7 DNA MER2_type 1 55 -284 * 1273 113 9 5 chr5 10089613 10089825 -189540325 + Tigger7 DNA MER2_type 2335 2547 -40 207 88 0 0 chr5 10090043 10090077 -189540073 + (A)n Simple_repeat Simple_repeat 1 34 0 708 218 81 0 chr5 10090652 10090826 -189539324 + MER5A DNA MER1_type 1 188 -1 399 223 8 40 chr5 10091466 10091598 -189538552 - L1MB7 LINE L1 -1 6173 6058 2372 180 40 67 chr5 10093656 10094499 -189535651 + MER21A LTR ERV1 1 930 -1 535 236 43 7 chr5 10097562 10097702 -189532448 - LTR52 LTR ERVL 0 421 277 55 86 0 0 chr5 10098816 10098955 -189531195 + AT_rich Low_complexity Low_complexity 1 139 0 1317 283 110 41 chr5 10098996 10099780 -189530370 - HAL1 LINE L1 -100 2407 1570 1350 194 90 4 chr5 10099780 10100058 -189530092 - AluJo SINE Alu -10 302 1 566 282 30 30 chr5 10100061 10100295 -189529855 - HAL1 LINE L1 -1026 1481 1248 308 306 145 30 chr5 10100373 10100828 -189529322 - L1ME LINE L1 -333 5829 5321 308 284 140 34 chr5 10101243 10101507 -189528643 - L1ME4a LINE L1 -71 6050 5759 276 295 33 16 chr5 10102071 10102193 -189527957 + MER104 DNA Tc2 1 124 -56 331 309 102 12 chr5 10102256 10102458 -189527692 + MLT1E LTR MaLR 1 220 -362 829 292 49 49 chr5 10102560 10102967 -189527183 + L1ME3A LINE L1 5723 6129 -41 3070 59 0 0 chr5 10103045 10103435 -189526715 - L1PA8 LINE L1 0 6172 5783 277 325 25 0 chr5 10103587 10103667 -189526483 - MIR SINE MIR -155 107 26 684 195 38 0 chr5 10104981 10105140 -189525010 - L1MB7 LINE L1 -9 6175 6011 762 257 30 10 chr5 10105365 10105669 -189524481 + L1ME2 LINE L1 2185 2494 -3652 605 147 16 24 chr5 10105690 10105932 -189524218 + L1MA7 LINE L1 5946 6291 0 2826 251 45 55 chr5 10105933 10107494 -189522656 + L1ME2 LINE L1 2490 4035 -2111 365 183 14 0 chr5 10107500 10107571 -189522579 + L1MC3 LINE L1 6878 6949 -836 1364 248 49 31 chr5 10107610 10108162 -189521988 + L1ME2 LINE L1 5584 6145 -19 189 0 0 0 chr5 10109600 10109621 -189520529 + (A)n Simple_repeat Simple_repeat 1 21 0 395 125 0 0 chr5 10109626 10109682 -189520468 - MLT1B LTR MaLR 0 390 335 * 990 237 5 0 chr5 10109681 10109900 -189520250 - MLT1B LTR MaLR -170 220 1 976 88 0 0 chr5 10109951 10110076 -189520074 + AluSg/x SINE Alu 174 298 -14 2116 118 0 7 chr5 10110163 10110459 -189519691 - AluSg SINE Alu -16 294 1 629 275 77 77 chr5 10110544 10111035 -189519115 + LTR33A LTR ERVL 31 521 -2 180 293 36 48 chr5 10111646 10111813 -189518337 - L2 LINE L2 -273 2999 2835 3383 139 46 56 chr5 10112101 10112726 -189517424 - LTR31 LTR ERV1 0 619 1 3660 200 35 4 chr5 10113120 10114041 -189516109 + MER45R DNA AcHobo 535 1483 -98 1013 189 0 0 chr5 10114107 10114276 -189515874 + AluSg/x SINE Alu 125 293 -19 1039 198 38 0 chr5 10114384 10114622 -189515528 - L1MA9 LINE L1 -36 6276 6030 * 2699 183 26 9 chr5 10114612 10115114 -189515036 + L1MA9 LINE L1 5424 5939 -373 273 57 0 0 chr5 10115114 10115149 -189515001 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2699 183 26 9 chr5 10115149 10115230 -189514920 + L1MA9 LINE L1 5939 6017 -295 2397 149 3 3 chr5 10115676 10116051 -189514099 + THE1C LTR MaLR 1 375 0 387 0 0 0 chr5 10117213 10117256 -189512894 + (TG)n Simple_repeat Simple_repeat 2 44 0 290 89 0 54 chr5 10117609 10117665 -189512485 + (TTTTC)n Simple_repeat Simple_repeat 1 53 0 198 103 0 0 chr5 10117663 10117692 -189512458 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 * 375 23 0 0 chr5 10117874 10117918 -189512232 + (TG)n Simple_repeat Simple_repeat 1 44 0 581 249 94 133 chr5 10118760 10119218 -189510932 - MLT1E LTR MaLR -105 549 110 413 252 119 13 chr5 10119235 10119386 -189510764 - MLT1E LTR MaLR -426 167 1 27 0 0 0 chr5 10119751 10119778 -189510372 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 10121532 10121560 -189508590 + AT_rich Low_complexity Low_complexity 1 28 0 2107 136 3 0 chr5 10121721 10122031 -189508119 + AluSx SINE Alu 1 311 -1 204 295 33 0 chr5 10122286 10122347 -189507803 + MIR SINE MIR 92 154 -108 34 55 0 0 chr5 10122350 10122405 -189507745 + AT_rich Low_complexity Low_complexity 1 55 0 7023 211 33 10 chr5 10123234 10124917 -189505233 + L1MC3 LINE L1 5547 7273 -512 2209 119 48 20 chr5 10124917 10125269 -189504881 + THE1B LTR MaLR 1 362 -2 7023 211 33 10 chr5 10125269 10125323 -189504827 + L1MC3 LINE L1 7273 7324 -461 1200 198 31 0 chr5 10125344 10125634 -189504516 + L1MC3 LINE L1 6150 6339 -5 21 36 0 0 chr5 10125657 10125685 -189504465 + AT_rich Low_complexity Low_complexity 1 28 0 1517 246 54 67 chr5 10125704 10126032 -189504118 - L1M4 LINE L1 -1824 4322 3991 180 0 0 0 chr5 10126032 10126052 -189504098 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1517 246 54 67 chr5 10126052 10126488 -189503662 - L1M4 LINE L1 -2155 3991 3568 606 262 143 6 chr5 10127055 10127391 -189502759 - MER114 LTR ERV 0 648 267 537 187 16 82 chr5 10127425 10127607 -189502543 - MER114 LTR ERV -478 170 1 2173 123 7 3 chr5 10128237 10128546 -189501604 + AluSx SINE Alu 1 310 -2 301 321 92 16 chr5 10128844 10129028 -189501122 + L2 LINE L2 2513 2710 -604 229 339 0 0 chr5 10129820 10129885 -189500265 + MIR SINE MIR 41 105 -103 468 376 105 0 chr5 10130704 10130962 -189499188 + L3 LINE CR1 1280 1564 -13 844 253 65 11 chr5 10131050 10131311 -189498839 - MLT1F LTR MaLR -113 429 155 261 280 40 0 chr5 10131348 10131423 -189498727 - MLT1F LTR MaLR -464 78 1 1573 210 40 101 chr5 10131482 10132035 -189498115 + LTR40a LTR ERVL 1 519 0 2064 117 0 11 chr5 10132253 10132535 -189497615 + AluSg SINE Alu 32 310 0 252 270 8 79 chr5 10133284 10133410 -189496740 - MLT1F-int LTR MaLR -813 558 442 240 295 8 23 chr5 10133585 10133714 -189496436 - MLT1F-int LTR MaLR -1221 150 24 399 305 36 0 chr5 10133746 10133892 -189496258 + MLT1F LTR MaLR 133 280 -262 1056 286 48 45 chr5 10133949 10134488 -189495662 - MLT1F LTR MaLR 0 542 2 334 264 0 0 chr5 10134659 10134750 -189495400 + (TG)n Simple_repeat Simple_repeat 2 92 0 1237 211 8 0 chr5 10134789 10135055 -189495095 - L1MD3 LINE L1 0 7995 7728 344 335 133 47 chr5 10135735 10136308 -189493842 + L2 LINE L2 1548 2169 -1145 494 85 73 6 chr5 10136790 10136955 -189493195 + (TA)n Simple_repeat Simple_repeat 1 176 0 * 559 26 37 90 chr5 10136931 10137120 -189493030 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 643 91 50 14 chr5 10137145 10137364 -189492786 + (TA)n Simple_repeat Simple_repeat 1 227 0 329 261 11 22 chr5 10137368 10137460 -189492690 - L1MC4 LINE L1 -1339 6703 6613 194 258 237 10 chr5 10138500 10138597 -189491553 + L2 LINE L2 3152 3270 -2 1948 139 27 17 chr5 10138981 10139275 -189490875 + AluSx SINE Alu 1 297 -15 22 35 0 0 chr5 10139332 10139361 -189490789 + AT_rich Low_complexity Low_complexity 1 29 0 198 103 0 0 chr5 10141203 10141232 -189488918 + (TAA)n Simple_repeat Simple_repeat 2 30 0 379 325 41 47 chr5 10142520 10142689 -189487461 - L2 LINE L2 -2 3270 3103 241 269 156 25 chr5 10142736 10142896 -189487254 + MIR SINE MIR 48 228 -34 1675 214 33 28 chr5 10143207 10143437 -189486713 - MSTB1 LTR MaLR 0 432 198 2371 84 3 3 chr5 10143437 10143736 -189486414 - AluSq SINE Alu -14 299 1 1675 214 33 28 chr5 10143736 10143931 -189486219 - MSTB1 LTR MaLR -234 198 5 182 345 53 18 chr5 10145639 10145752 -189484398 + MIR SINE MIR 113 229 -33 1728 209 105 38 chr5 10146662 10147241 -189482909 + L1MB8 LINE L1 5271 5888 -290 1580 150 48 107 chr5 10149136 10149576 -189480574 + MLT2D LTR ERVL 1 414 0 202 344 0 33 chr5 10149973 10150124 -189480026 + C-rich Low_complexity Low_complexity 3 148 0 229 238 62 12 chr5 10151277 10151357 -189478793 - MER63 DNA MER1_type 0 1060 977 265 271 90 66 chr5 10151357 10151479 -189478671 - MER63 DNA MER1_type -310 750 2 278 194 14 0 chr5 10151549 10151621 -189478529 + GA-rich Low_complexity Low_complexity 1 73 0 2029 144 46 25 chr5 10151717 10152084 -189478066 + THE1C LTR MaLR 1 375 0 306 0 0 0 chr5 10153074 10153108 -189477042 + (CA)n Simple_repeat Simple_repeat 2 35 0 228 342 111 8 chr5 10153163 10153280 -189476870 - MIR SINE MIR -62 146 18 218 132 19 0 chr5 10153969 10154022 -189476128 + (CA)n Simple_repeat Simple_repeat 1 54 0 878 215 37 45 chr5 10155075 10155317 -189474833 + MLT1A1 LTR MaLR 1 240 -125 2828 59 6 0 chr5 10155754 10156110 -189474040 - L1PA7 LINE L1 -8 6146 5789 3963 65 23 7 chr5 10156110 10156747 -189473403 + L1PA7 LINE L1 5146 5789 -365 392 263 3 3 chr5 10156841 10156971 -189473179 + MLT1B LTR MaLR 304 390 0 197 86 57 0 chr5 10157192 10157227 -189472923 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 272 212 30 20 chr5 10157262 10157361 -189472789 + (TTATA)n Simple_repeat Simple_repeat 5 104 0 413 338 44 44 chr5 10157783 10157831 -189472319 - L1M4 LINE L1 -2286 3860 3813 1555 180 47 68 chr5 10157831 10157904 -189472246 - LTR52 LTR ERVL -2 419 346 261 0 0 0 chr5 10157904 10157933 -189472217 + (CA)n Simple_repeat Simple_repeat 2 30 0 1555 180 47 68 chr5 10157933 10158287 -189471863 - LTR52 LTR ERVL -75 346 1 413 338 44 44 chr5 10158287 10158555 -189471595 - L1M4 LINE L1 -2332 3814 3544 229 300 0 12 chr5 10158637 10158717 -189471433 + (TA)n Simple_repeat Simple_repeat 2 80 0 312 242 10 99 chr5 10158818 10158918 -189471232 + MIR SINE MIR 59 142 -120 2215 225 87 21 chr5 10158918 10159527 -189470623 - MLT1E1 LTR MaLR -1 653 5 312 242 10 99 chr5 10159527 10159588 -189470562 + MIR SINE MIR 142 207 -55 251 273 107 9 chr5 10160694 10160809 -189469341 - MIR SINE MIR -70 138 31 225 65 0 0 chr5 10161693 10161724 -189468426 + (GA)n Simple_repeat Simple_repeat 2 32 0 224 167 21 0 chr5 10161740 10161788 -189468362 + (TA)n Simple_repeat Simple_repeat 2 50 0 1363 221 41 67 chr5 10161930 10162095 -189468055 + MER67C LTR ERV1 1 169 -345 2205 140 68 33 chr5 10162095 10162523 -189467627 + MER65A LTR ERV1 1 443 -2 1363 221 41 67 chr5 10162523 10162911 -189467239 + MER67C LTR ERV1 169 506 -8 255 308 51 92 chr5 10164406 10164512 -189465638 - MLT1K LTR MaLR -398 190 94 417 243 27 18 chr5 10164512 10164623 -189465527 - MER81 DNA DNA -2 112 1 255 308 51 92 chr5 10164623 10164711 -189465439 - MLT1K LTR MaLR -494 94 4 21 82 0 0 chr5 10164793 10164842 -189465308 + AT_rich Low_complexity Low_complexity 1 49 0 4697 193 10 8 chr5 10166407 10167324 -189462826 + MER49 LTR ERV1 5 923 0 1809 227 45 16 chr5 10167437 10167882 -189462268 + MLT1C LTR MaLR 1 458 -9 1288 145 94 86 chr5 10168851 10169223 -189460927 + THE1C LTR MaLR 1 375 0 492 219 41 41 chr5 10169887 10170056 -189460094 - MER89 LTR ERV1 -390 169 1 1230 260 38 30 chr5 10172017 10172544 -189457606 - L1M4 LINE L1 -822 5324 4794 1017 216 155 4 chr5 10173784 10174048 -189456102 + MLT2D LTR ERVL 92 395 -19 232 182 23 0 chr5 10174079 10174123 -189456027 + MLT2D LTR ERVL 510 554 0 452 312 144 10 chr5 10174127 10174425 -189455725 + LTR16A LTR ERVL 25 362 -88 844 61 0 0 chr5 10175381 10175495 -189454655 - L1PA4 LINE L1 0 6155 6042 772 227 62 27 chr5 10176953 10177213 -189452937 + L1MA9 LINE L1 5961 6229 -83 478 78 0 111 chr5 10177213 10177263 -189452887 - MADE1 DNA Mariner 0 80 43 1018 52 22 0 chr5 10177263 10177398 -189452752 + L1PA4 LINE L1 6017 6154 -1 478 78 0 111 chr5 10177398 10177437 -189452713 - MADE1 DNA Mariner -37 43 1 284 75 0 0 chr5 10177437 10177477 -189452673 + L1MA9 LINE L1 6234 6273 -39 1929 187 37 8 chr5 10177515 10177894 -189452256 + MLT1B LTR MaLR 1 390 0 23 54 0 0 chr5 10178065 10178102 -189452048 + AT_rich Low_complexity Low_complexity 1 37 0 203 208 0 19 chr5 10179511 10179564 -189450586 + (TTAAA)n Simple_repeat Simple_repeat 5 56 0 25 31 0 0 chr5 10179872 10179904 -189450246 + AT_rich Low_complexity Low_complexity 1 32 0 1936 223 31 119 chr5 10180011 10180773 -189449377 - L1MA6 LINE L1 -182 6118 5424 1578 180 20 8 chr5 10180767 10181178 -189448972 + L1MA6 LINE L1 5008 5423 -743 * 1447 39 6 0 chr5 10182435 10182613 -189447537 + L1PA4 LINE L1 5975 6153 -2 197 392 108 0 chr5 10183125 10183255 -189446895 - L2 LINE L2 -2 3270 3127 2248 183 48 101 chr5 10183428 10183481 -189446669 - MLT2B3 LTR ERVL 0 554 500 416 51 17 0 chr5 10183481 10183540 -189446610 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2248 183 48 101 chr5 10183540 10183946 -189446204 - MLT2B3 LTR ERVL -54 500 74 1118 67 11 11 chr5 10183946 10184126 -189446024 + (CA)n Simple_repeat Simple_repeat 1 180 0 2248 183 48 101 chr5 10184126 10184173 -189445977 - MLT2B3 LTR ERVL -480 74 78 1106 71 0 22 chr5 10184173 10184356 -189445794 + (CA)n Simple_repeat Simple_repeat 2 180 0 2248 183 48 101 chr5 10184356 10184431 -189445719 - MLT2B3 LTR ERVL -475 79 2 264 318 35 0 chr5 10184443 10184528 -189445622 - MIR SINE MIR -127 135 48 3714 52 2 0 chr5 10185406 10185871 -189444279 + L1PA5 LINE L1 5684 6149 -5 2831 124 16 2 chr5 10185951 10186404 -189443746 - L1PA15 LINE L1 -2 6163 5705 668 150 53 0 chr5 10186404 10186517 -189443633 + L1PA15 LINE L1 5558 5676 -489 2116 80 0 0 chr5 10190573 10190849 -189439301 + AluY SINE Alu 32 307 -4 274 261 0 0 chr5 10192155 10192220 -189437930 + L1MB7 LINE L1 17 81 -6461 * 374 229 28 50 chr5 10192205 10192384 -189437766 + L1MB7 LINE L1 3741 3915 -2729 513 220 97 113 chr5 10192384 10192640 -189437510 + MLT1D LTR MaLR 1 271 -196 2192 207 47 11 chr5 10192640 10193176 -189436974 + L1MB7 LINE L1 6058 6612 -70 4042 190 23 8 chr5 10193199 10194282 -189435868 - L1PB4 LINE L1 -109 6047 4953 1080 228 30 0 chr5 10194285 10194522 -189435628 + L1PB4 LINE L1 4712 4955 -1191 256 247 78 13 chr5 10194801 10194878 -189435272 + MIR SINE MIR 31 112 -150 2130 151 81 3 chr5 10194882 10195265 -189434885 + MLT2C2 LTR ERVL 4 416 -48 288 0 0 0 chr5 10195276 10195308 -189434842 + (TG)n Simple_repeat Simple_repeat 1 32 0 1696 148 22 94 chr5 10196366 10196590 -189433560 - THE1C LTR MaLR 0 375 191 2080 130 3 0 chr5 10196590 10196890 -189433260 + AluSq SINE Alu 1 301 -12 1696 148 22 94 chr5 10196890 10197069 -189433081 - THE1C LTR MaLR -184 191 1 3435 118 84 16 chr5 10197375 10197925 -189432225 + LTR18B LTR ERVL 1 587 -27 2205 170 29 12 chr5 10198742 10198769 -189431381 - MSTA LTR MaLR 0 428 403 15867 66 3 9 chr5 10198769 10201661 -189428489 + L1PA6 LINE L1 3246 6154 0 2205 170 29 12 chr5 10201661 10202051 -189428099 - MSTA LTR MaLR -25 403 4 4825 165 14 19 chr5 10202053 10203045 -189427105 - L1PA16 LINE L1 -29 6137 5151 32 26 0 0 chr5 10203529 10203568 -189426582 + AT_rich Low_complexity Low_complexity 1 39 0 390 344 59 43 chr5 10204322 10204697 -189425453 + L1MC/D LINE L1 5428 5808 -2000 256 236 18 0 chr5 10204817 10204927 -189425223 + (TA)n Simple_repeat Simple_repeat 1 112 0 200 294 0 16 chr5 10205110 10205236 -189424914 + (TATG)n Simple_repeat Simple_repeat 1 124 0 320 266 11 57 chr5 10205244 10205421 -189424729 - L1M4 LINE L1 -2291 3855 3687 1520 235 11 16 chr5 10206300 10206678 -189423472 - L1MD1 LINE L1 -127 6115 5740 468 323 22 36 chr5 10207654 10207877 -189422273 - MIR SINE MIR -38 224 5 224 333 15 68 chr5 10208094 10208226 -189421924 + L2 LINE L2 3148 3272 0 235 258 21 86 chr5 10208504 10208597 -189421553 - L2 LINE L2 -17 3255 3169 296 309 103 7 chr5 10208629 10208765 -189421385 + MIR SINE MIR 53 201 -61 1675 215 67 0 chr5 10208895 10209341 -189420809 + L1PA16 LINE L1 4888 5363 -783 588 107 0 0 chr5 10209345 10209429 -189420721 + AluS SINE Alu 1 84 -228 4055 127 43 1 chr5 10209429 10210168 -189419982 + L1PA16 LINE L1 5355 6163 0 24 0 0 0 chr5 10211300 10211324 -189418826 + AT_rich Low_complexity Low_complexity 1 24 0 234 227 61 0 chr5 10211425 10211491 -189418659 + MER5B DNA MER1_type 109 178 0 1905 114 54 14 chr5 10212165 10212462 -189417688 + AluSc SINE Alu 1 309 0 1076 161 0 0 chr5 10212490 10212652 -189417498 + AluSg/x SINE Alu 137 298 -14 2258 64 16 13 chr5 10214103 10214417 -189415733 + L1PA5 LINE L1 5839 6153 -1 844 220 38 19 chr5 10214622 10214831 -189415319 - MER20 DNA MER1_type 0 219 7 180 300 20 0 chr5 10215297 10215347 -189414803 - MIR SINE MIR -204 58 8 231 308 57 6 chr5 10215461 10215620 -189414530 - L1M4 LINE L1 -1446 4700 4534 26 93 0 0 chr5 10216774 10216849 -189413301 + AT_rich Low_complexity Low_complexity 1 75 0 1196 213 84 58 chr5 10216878 10217258 -189412892 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr5 10217323 10217344 -189412806 + AT_rich Low_complexity Low_complexity 1 21 0 303 204 151 11 chr5 10217954 10218047 -189412103 + L2 LINE L2 1878 1983 -1331 2449 71 0 3 chr5 10218053 10218361 -189411789 - AluY SINE Alu -2 309 3 1076 76 0 0 chr5 10218363 10218495 -189411655 - AluY SINE Alu -177 134 3 860 351 114 24 chr5 10218501 10218642 -189411508 + L2 LINE L2 1989 2116 -1197 270 0 0 0 chr5 10218642 10218672 -189411478 + (TTG)n Simple_repeat Simple_repeat 2 31 0 860 351 114 24 chr5 10218672 10219713 -189410437 + L2 LINE L2 2116 3278 -35 423 342 53 22 chr5 10219721 10219946 -189410204 - MIR SINE MIR -3 259 28 248 28 56 0 chr5 10219951 10219987 -189410163 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 292 146 135 67 chr5 10220993 10221082 -189409068 - L1PA16 LINE L1 0 6166 6072 23 0 0 0 chr5 10221301 10221324 -189408826 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr5 10221361 10221394 -189408756 + AT_rich Low_complexity Low_complexity 1 33 0 30 45 0 0 chr5 10222393 10222437 -189407713 + AT_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr5 10222556 10222592 -189407558 + AT_rich Low_complexity Low_complexity 1 36 0 210 71 0 0 chr5 10223554 10223582 -189406568 + (TA)n Simple_repeat Simple_repeat 2 29 0 315 320 135 38 chr5 10225119 10225820 -189404330 - L2 LINE L2 -10 3262 2469 210 240 40 0 chr5 10225834 10225884 -189404266 - MER91 DNA MER1_type -14 126 75 223 343 33 47 chr5 10226435 10226648 -189403502 - L2 LINE L2 -1412 1902 1693 1317 216 65 23 chr5 10227475 10227826 -189402324 + MLT1A2 LTR MaLR 5 370 -4 603 234 21 0 chr5 10227898 10228039 -189402111 - MER20 DNA MER1_type 0 219 76 219 88 0 0 chr5 10228259 10228293 -189401857 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 203 152 22 0 chr5 10229131 10229177 -189400973 + CT-rich Low_complexity Low_complexity 1 47 0 255 244 139 23 chr5 10229193 10229279 -189400871 + L2 LINE L2 3203 3298 -15 566 261 6 28 chr5 10229504 10229680 -189400470 + L1MD2 LINE L1 5826 5997 -362 587 275 17 78 chr5 10229698 10229993 -189400157 + L1MD2 LINE L1 6070 6346 -13 2126 161 131 47 chr5 10230853 10231363 -189398787 + MLT2B3 LTR ERVL 1 553 -1 2544 248 61 24 chr5 10231363 10231590 -189398560 + ERVL-B3 LTR ERVL 4 221 -5264 1824 229 46 64 chr5 10231590 10232154 -189397996 + MLT2B3 LTR ERVL 1 554 0 2544 248 61 24 chr5 10232154 10232167 -189397983 + ERVL-B3 LTR ERVL 221 232 -5253 2102 191 33 5 chr5 10232167 10232587 -189397563 + MSTB1 LTR MaLR 1 432 0 2544 248 61 24 chr5 10232587 10233077 -189397073 + ERVL-B3 LTR ERVL 232 731 -4754 537 82 0 0 chr5 10233084 10233157 -189396993 + L1PA13 LINE L1 6083 6155 -8 3432 208 38 5 chr5 10233158 10234483 -189395667 + ERVL-B3 LTR ERVL 996 2405 -3359 565 221 17 88 chr5 10234483 10234664 -189395486 - MER68 LTR ERV1 -365 197 30 510 85 0 24 chr5 10235436 10235518 -189394632 - L1PA6 LINE L1 0 6154 6075 3956 226 13 41 chr5 10235647 10236662 -189393488 + MER45B DNA AcHobo 1 986 -54 2150 151 70 51 chr5 10236666 10237097 -189393053 + ERVL-B3 LTR ERVL 2402 2840 -2924 * 2278 168 5 10 chr5 10237095 10237488 -189392662 + ERVL LTR ERVL 5039 5429 -335 1731 249 35 5 chr5 10237609 10238039 -189392111 + MER68 LTR ERV1 120 562 0 240 319 83 56 chr5 10238268 10238412 -189391738 + L2 LINE L2 2608 2755 -559 246 169 89 81 chr5 10239654 10239778 -189390372 + MER54B LTR ERVL 339 463 -330 21 57 0 0 chr5 10240938 10240973 -189389177 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 10241106 10241149 -189389001 + AT_rich Low_complexity Low_complexity 1 43 0 3441 309 83 28 chr5 10241197 10241937 -189388213 - L2 LINE L2 -498 2816 2118 1732 181 40 27 chr5 10241937 10242307 -189387843 - THE1C LTR MaLR 0 375 1 3441 309 83 28 chr5 10242307 10242856 -189387294 - L2 LINE L2 -1196 2118 1420 1993 140 46 6 chr5 10242856 10243206 -189386944 + THE1B LTR MaLR 1 364 0 3441 309 83 28 chr5 10243206 10243512 -189386638 - L2 LINE L2 -1894 1420 1132 422 326 77 11 chr5 10245446 10245964 -189384186 - MLT1G1 LTR MaLR -2 588 5 4512 176 37 11 chr5 10246351 10246727 -189383423 - L1PB4 LINE L1 -3 6153 5788 184 59 59 0 chr5 10246727 10246761 -189383389 + (TA)n Simple_repeat Simple_repeat 1 36 0 4512 176 37 11 chr5 10246761 10247442 -189382708 - L1PB4 LINE L1 -368 5788 5068 1560 211 6 3 chr5 10247445 10247782 -189382368 + L1 LINE L1 4697 5034 -1112 26 88 0 0 chr5 10249134 10249202 -189380948 + AT_rich Low_complexity Low_complexity 1 68 0 188 342 72 18 chr5 10250342 10250453 -189379697 + MIR3 SINE MIR 79 195 -13 1476 257 31 21 chr5 10250619 10251230 -189378920 - L1M4 LINE L1 -3025 3121 2505 23 33 0 0 chr5 10251923 10251953 -189378197 + AT_rich Low_complexity Low_complexity 1 30 0 512 312 23 23 chr5 10252852 10253067 -189377083 + MIR SINE MIR 48 262 0 22 0 0 0 chr5 10253459 10253481 -189376669 + AT_rich Low_complexity Low_complexity 1 22 0 546 169 0 0 chr5 10253502 10253591 -189376559 - MSTB1 LTR MaLR -50 382 294 2023 141 0 0 chr5 10253617 10253900 -189376250 + AluSx SINE Alu 1 283 -29 484 15 31 0 chr5 10254098 10254163 -189375987 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 1678 99 13 115 chr5 10254981 10255321 -189374829 + AluSx SINE Alu 1 308 0 442 329 103 26 chr5 10255468 10255778 -189374372 + L2 LINE L2 2976 3309 -4 2670 240 68 22 chr5 10255949 10256802 -189373348 - L1ME1 LINE L1 -5 6161 5270 387 264 54 0 chr5 10256825 10256954 -189373196 - L1ME1 LINE L1 -992 5154 5019 2068 224 154 8 chr5 10257279 10257878 -189372272 - MER76 LTR ERV -1 687 2 1264 226 25 14 chr5 10258621 10258900 -189371250 + AluJo SINE Alu 1 282 -30 309 26 0 0 chr5 10258904 10258942 -189371208 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 888 58 0 16 chr5 10260317 10260438 -189369712 + L1PA6 LINE L1 6036 6154 0 2131 65 25 11 chr5 10261489 10261765 -189368385 + AluY SINE Alu 15 294 -17 180 0 0 0 chr5 10263245 10263265 -189366885 + (A)n Simple_repeat Simple_repeat 1 20 0 221 297 116 43 chr5 10264231 10264369 -189365781 + MIR SINE MIR 66 213 -49 22 0 0 0 chr5 10265693 10265715 -189364435 + AT_rich Low_complexity Low_complexity 1 22 0 8527 36 1 1 chr5 10266310 10268094 -189362056 + L1PA5 LINE L1 4358 6141 -13 2541 58 9 6 chr5 10268690 10269017 -189361133 + L1PA7 LINE L1 5822 6149 -5 1869 291 25 32 chr5 10269824 10270547 -189359603 - L1MEc LINE L1 -5643 753 36 2670 51 0 0 chr5 10271257 10271568 -189358582 - AluY SINE Alu 0 311 1 1605 142 103 14 chr5 10272023 10272304 -189357846 + AluSx SINE Alu 1 306 -6 418 263 10 0 chr5 10272616 10272715 -189357435 - MLT2E LTR ERVL -476 152 53 2142 120 10 98 chr5 10273530 10273929 -189356221 + THE1B LTR MaLR 1 364 0 360 265 63 63 chr5 10276940 10277129 -189353021 - L1MEd LINE L1 -4678 1728 1540 1944 118 11 0 chr5 10277158 10277430 -189352720 - AluSx SINE Alu -37 275 1 243 110 64 18 chr5 10277598 10277707 -189352443 + (TA)n Simple_repeat Simple_repeat 1 114 0 387 292 42 28 chr5 10277711 10277938 -189352212 - L1MEd LINE L1 -5004 1392 1152 235 189 19 0 chr5 10277987 10278040 -189352110 - L1PA16 LINE L1 0 6166 6113 2971 116 32 26 chr5 10278043 10278461 -189351689 - L1P4 LINE L1 -407 5758 5332 1768 102 87 26 chr5 10278461 10278747 -189351403 - AluSp SINE Alu 0 306 5 2971 116 32 26 chr5 10278747 10278868 -189351282 - L1P4 LINE L1 -833 5332 5213 26 30 0 0 chr5 10278881 10278914 -189351236 + AT_rich Low_complexity Low_complexity 1 33 0 299 279 60 67 chr5 10280053 10280322 -189349828 - MLT1J LTR MaLR -2 509 243 6942 26 1 1 chr5 10281298 10282114 -189348036 - L1PA4 LINE L1 -1 6154 5339 6547 41 5 0 chr5 10282109 10282917 -189347233 + L1PA4 LINE L1 4515 5326 -820 * 1216 221 12 24 chr5 10283082 10283335 -189346815 - Tigger3(Golem) DNA MER2_type -2778 251 2 22 0 0 0 chr5 10284184 10284206 -189345944 + AT_rich Low_complexity Low_complexity 1 22 0 186 333 30 0 chr5 10284208 10284274 -189345876 + L2 LINE L2 3205 3272 0 1836 132 92 7 chr5 10284649 10284930 -189345220 - AluSx SINE Alu -6 306 2 318 294 55 14 chr5 10285176 10285322 -189344828 - MLT1I LTR MaLR 0 409 258 255 223 160 11 chr5 10285588 10285682 -189344468 + MIR SINE MIR 137 244 -18 2175 225 89 20 chr5 10285734 10286395 -189343755 - Tigger7 DNA MER2_type -14 2573 1 222 304 0 0 chr5 10286395 10286507 -189343643 + (TAG)n Simple_repeat Simple_repeat 1 112 0 507 260 0 0 chr5 10286531 10286708 -189343442 + (TAG)n Simple_repeat Simple_repeat 2 178 0 354 316 14 29 chr5 10287000 10287139 -189343011 + MIR SINE MIR 107 243 -19 620 224 162 25 chr5 10287405 10287862 -189342288 - L1M LINE L1 -752 5394 4899 303 353 22 0 chr5 10288142 10288281 -189341869 - L1ME LINE L1 -453 5668 5527 2406 83 0 16 chr5 10288935 10289247 -189340903 + AluSp SINE Alu 1 307 -6 827 317 53 36 chr5 10290413 10290886 -189339264 - MLT1H LTR MaLR -54 495 15 1758 175 25 22 chr5 10292620 10292986 -189337164 + THE1C LTR MaLR 5 371 -4 198 261 171 27 chr5 10293151 10293262 -189336888 + L3 LINE CR1 1188 1314 -263 1329 223 62 30 chr5 10293296 10293508 -189336642 - MLT1B LTR MaLR 0 390 159 2186 100 7 16 chr5 10293508 10293817 -189336333 - AluSc SINE Alu -3 306 1 1329 223 62 30 chr5 10293817 10293977 -189336173 - MLT1B LTR MaLR -231 159 6 253 88 0 0 chr5 10295768 10295802 -189334348 + (GA)n Simple_repeat Simple_repeat 2 35 0 558 240 0 0 chr5 10295803 10295953 -189334197 + GA-rich Low_complexity Low_complexity 3 152 0 243 0 0 0 chr5 10297148 10297175 -189332975 + (CA)n Simple_repeat Simple_repeat 2 28 0 231 146 0 0 chr5 10297246 10297287 -189332863 + (CA)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr5 10298759 10298781 -189331369 + AT_rich Low_complexity Low_complexity 1 22 0 43376 46 4 1 chr5 10299708 10305855 -189324295 + L1PA4 LINE L1 1 6165 0 729 318 108 31 chr5 10306541 10307057 -189323093 - L2 LINE L2 -1002 2312 1757 245 247 0 13 chr5 10307114 10307191 -189322959 + (CATATA)n Simple_repeat Simple_repeat 5 80 0 12950 58 10 12 chr5 10307194 10309123 -189321027 - HERVL LTR ERVL -344 5310 3368 2516 89 10 79 chr5 10309791 10310196 -189319954 - MER51B LTR ERV1 0 377 1 23 33 0 0 chr5 10310215 10310245 -189319905 + AT_rich Low_complexity Low_complexity 1 30 0 328 317 36 48 chr5 10310616 10310825 -189319325 + MIR SINE MIR 42 252 -10 1426 227 51 17 chr5 10311398 10311643 -189318507 - MLT1A1 LTR MaLR 0 365 103 2233 116 33 25 chr5 10311643 10312004 -189318146 + THE1B LTR MaLR 1 364 0 1426 227 51 17 chr5 10312004 10312111 -189318039 - MLT1A1 LTR MaLR -262 103 1 22 35 0 0 chr5 10312609 10312638 -189317512 + AT_rich Low_complexity Low_complexity 1 29 0 1333 192 73 0 chr5 10312871 10313173 -189316977 - L1MC1 LINE L1 -2 6331 6008 5662 26 0 0 chr5 10313476 10314177 -189315973 - L1PA3 LINE L1 -1303 4843 4143 7550 28 3 0 chr5 10314177 10315556 -189314594 + L1PA3 LINE L1 4818 6155 0 220 156 44 0 chr5 10316579 10316624 -189313526 + CT-rich Low_complexity Low_complexity 2 48 0 1089 226 8 25 chr5 10317118 10317357 -189312793 - AluJo SINE Alu -13 299 65 2080 131 0 0 chr5 10317444 10317741 -189312409 - AluSx SINE Alu -15 297 1 11187 23 0 0 chr5 10318264 10319635 -189310515 - L1P LINE L1 -1421 4725 3355 3981 0 0 0 chr5 10319636 10320096 -189310054 + L1HS LINE L1 5696 6155 0 244 36 0 125 chr5 10320096 10320152 -189309998 + (A)n Simple_repeat Simple_repeat 1 49 0 2290 210 56 26 chr5 10320594 10321237 -189308913 + L1MC3 LINE L1 6813 7474 -311 2265 189 8 8 chr5 10321236 10321733 -189308417 - L1PA15 LINE L1 -1052 5094 4598 * 4868 148 29 22 chr5 10321742 10322795 -189307355 + L1PA15 LINE L1 5104 6161 -4 742 195 52 108 chr5 10322828 10323172 -189306978 + L1MC3 LINE L1 7461 7785 0 480 273 18 0 chr5 10323349 10323459 -189306691 - MER5B DNA MER1_type -60 118 7 181 402 0 12 chr5 10323510 10323592 -189306558 + MER5A DNA MER1_type 7 87 -102 343 278 56 9 chr5 10323773 10323881 -189306269 - MIR SINE MIR -73 189 77 195 42 0 0 chr5 10323913 10323937 -189306213 + (CA)n Simple_repeat Simple_repeat 1 24 0 1019 161 62 45 chr5 10323955 10324198 -189305952 + MER2 DNA MER2_type 48 294 -51 488 172 66 0 chr5 10325186 10325308 -189304842 - L1MA7 LINE L1 0 6291 6162 2500 66 0 0 chr5 10325362 10325665 -189304485 - AluY SINE Alu -8 303 1 213 219 0 0 chr5 10325990 10326063 -189304087 + (TG)n Simple_repeat Simple_repeat 1 73 0 1339 233 23 19 chr5 10326128 10326555 -189303595 + MLT2B1 LTR ERVL 1 478 -42 414 196 14 14 chr5 10326555 10326703 -189303447 + (TCTA)n Simple_repeat Simple_repeat 4 151 0 215 180 33 0 chr5 10326718 10326779 -189303371 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 354 143 0 0 chr5 10326786 10326849 -189303301 + MLT2B1 LTR ERVL 458 520 0 3426 104 40 2 chr5 10327611 10328132 -189302018 - L1PA13 LINE L1 -5 6158 5618 1319 219 45 31 chr5 10328357 10328717 -189301433 + MLT1A2 LTR MaLR 5 462 -5 206 297 36 9 chr5 10328850 10328961 -189301189 + CT-rich Low_complexity Low_complexity 5 118 0 1863 132 76 20 chr5 10329130 10329485 -189300665 + THE1C LTR MaLR 1 375 0 8384 141 54 27 chr5 10329485 10330056 -189300094 + THE1B-int LTR MaLR 1 556 -1024 2131 127 11 50 chr5 10330056 10330435 -189299715 + THE1B LTR MaLR 1 364 0 10538 125 11 2 chr5 10330435 10332000 -189298150 + THE1B-int LTR MaLR 1 1580 0 2047 156 11 32 chr5 10332000 10332372 -189297778 + THE1B LTR MaLR 1 364 0 8384 141 54 27 chr5 10332372 10333329 -189296821 + THE1B-int LTR MaLR 555 1571 -9 1199 140 82 27 chr5 10333329 10333586 -189296564 + THE1C LTR MaLR 105 375 0 423 312 84 5 chr5 10333590 10333792 -189296358 + MIR SINE MIR 34 251 -11 26 50 0 0 chr5 10333811 10333851 -189296299 + AT_rich Low_complexity Low_complexity 1 40 0 1637 172 22 0 chr5 10333861 10334171 -189295979 - AluSx SINE Alu 0 319 4 4922 55 19 0 chr5 10334259 10334880 -189295270 - L1PA8 LINE L1 -4 6168 5536 2344 111 13 21 chr5 10335168 10335546 -189294604 - THE1C LTR MaLR 0 375 1 322 245 6 6 chr5 10335627 10335790 -189294360 + (TA)n Simple_repeat Simple_repeat 1 163 0 263 28 28 0 chr5 10335854 10335890 -189294260 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 949 152 81 113 chr5 10335915 10336224 -189293926 + AluJo SINE Alu 2 300 -2 22 0 0 0 chr5 10337122 10337144 -189293006 + AT_rich Low_complexity Low_complexity 1 22 0 1190 213 55 22 chr5 10339473 10339866 -189290284 - MER54B LTR ERVL 0 793 488 934 266 145 0 chr5 10340632 10340921 -189289229 + LTR40a LTR ERVL 2 332 -187 21 36 0 0 chr5 10340939 10340967 -189289183 + AT_rich Low_complexity Low_complexity 1 28 0 242 328 158 28 chr5 10341028 10341275 -189288875 + L3 LINE CR1 1291 1569 -8 238 237 53 0 chr5 10341589 10341665 -189288485 + L1ME1 LINE L1 6064 6143 -23 2077 140 0 0 chr5 10341742 10342050 -189288100 + AluSx SINE Alu 4 311 -1 194 380 87 39 chr5 10342367 10342596 -189287554 - MIR SINE MIR -15 247 8 1871 17 13 0 chr5 10344343 10344576 -189285574 + L1PA4 LINE L1 4203 4438 -1708 * 7225 21 0 3 chr5 10344574 10345786 -189284364 + L1PA4 LINE L1 4927 6135 -20 252 0 0 0 chr5 10345790 10345818 -189284332 + (TAA)n Simple_repeat Simple_repeat 3 30 0 2045 105 24 14 chr5 10346250 10346545 -189283605 - AluSx SINE Alu -4 308 11 2276 108 7 0 chr5 10347065 10347371 -189282779 - AluSg SINE Alu -2 308 1 536 368 51 21 chr5 10347934 10348646 -189281504 - L2 LINE L2 -220 3093 2361 393 312 162 34 chr5 10348702 10349328 -189280822 + L2 LINE L2 2462 3176 -137 190 308 0 19 chr5 10349455 10349507 -189280643 + L2 LINE L2 3207 3257 -15 805 217 76 38 chr5 10351148 10351509 -189278641 + Zaphod DNA AcHobo 511 896 -3135 2098 127 0 16 chr5 10351509 10351823 -189278327 - AluSx SINE Alu -3 309 1 805 217 76 38 chr5 10351823 10351935 -189278215 + Zaphod DNA AcHobo 896 1002 -3029 453 226 21 153 chr5 10352056 10352210 -189277940 + Zaphod DNA AcHobo 3735 3821 -210 1469 186 116 3 chr5 10352210 10352537 -189277613 - MLT1A1 LTR MaLR -1 364 1 453 226 21 153 chr5 10352537 10352722 -189277428 + Zaphod DNA AcHobo 3821 4029 -2 266 321 50 25 chr5 10353105 10353264 -189276886 + MIR SINE MIR 90 252 -10 3082 73 7 0 chr5 10353315 10353726 -189276424 - L1PA7 LINE L1 -1 6153 5740 347 281 79 26 chr5 10354324 10354438 -189275712 - L2 LINE L2 -1 3312 3193 1900 198 8 6 chr5 10354705 10355069 -189275081 + MLT1A1 LTR MaLR 1 365 0 705 196 23 6 chr5 10355536 10355862 -189274288 + CT-rich Low_complexity Low_complexity 1 331 0 941 166 0 143 chr5 10355864 10356087 -189274063 - AluJb SINE Alu -38 274 84 367 270 85 18 chr5 10356713 10356878 -189273272 - MLT1H LTR MaLR -339 210 57 364 112 45 79 chr5 10358266 10358355 -189271795 + L1MA7 LINE L1 6206 6291 0 301 194 56 56 chr5 10358363 10358471 -189271679 + L1MC/D LINE L1 5705 5812 -309 585 178 23 11 chr5 10359385 10359559 -189270591 + CT-rich Low_complexity Low_complexity 1 176 0 1919 148 7 3 chr5 10359639 10359949 -189270201 + AluSx SINE Alu 1 311 -1 300 294 96 7 chr5 10360168 10360314 -189269836 - HAL1 LINE L1 -2304 203 45 379 335 62 52 chr5 10361484 10361809 -189268341 + L1MEd LINE L1 1011 1338 -5078 1098 280 97 42 chr5 10361845 10362363 -189267787 - MLT1G LTR MaLR -11 579 34 505 303 104 66 chr5 10362415 10363017 -189267133 + L1MEd LINE L1 1203 2028 -4579 2632 137 24 9 chr5 10363126 10363548 -189266602 + MSTA LTR MaLR 1 428 0 2086 205 42 34 chr5 10365591 10365797 -189264353 - L1MA9 LINE L1 -323 5989 5786 249 83 0 0 chr5 10365797 10365833 -189264317 + (CA)n Simple_repeat Simple_repeat 2 37 0 2086 205 42 34 chr5 10365833 10366123 -189264027 - L1MA9 LINE L1 -526 5786 5489 966 253 98 7 chr5 10366126 10366431 -189263719 + L1 LINE L1 3898 4230 -1916 810 215 48 16 chr5 10366718 10366904 -189263246 - MER20 DNA MER1_type 0 219 28 233 222 19 19 chr5 10367302 10367356 -189262794 + L1M3c LINE L1 2 55 -6086 482 343 0 52 chr5 10367540 10367951 -189262199 + L1M3c LINE L1 50 493 -5638 228 349 0 15 chr5 10368140 10368206 -189261944 + L1M3de LINE L1 280 344 -6309 232 246 46 62 chr5 10368244 10368309 -189261841 + L1M3de LINE L1 927 990 -5663 254 309 52 10 chr5 10368339 10368436 -189261714 + L1M3de LINE L1 915 1015 -5638 259 306 47 12 chr5 10368454 10368539 -189261611 + L1 LINE L1 278 365 -6288 4105 280 34 26 chr5 10368568 10370131 -189260019 + L1 LINE L1 935 2137 -4516 4711 241 70 14 chr5 10370265 10372123 -189258027 + L1MC/D LINE L1 2074 4324 -2058 1008 94 29 0 chr5 10372123 10372293 -189257857 + GA-rich Low_complexity Low_complexity 1 175 0 4711 241 70 14 chr5 10372293 10373502 -189256648 + L1MC/D LINE L1 4324 5464 -918 402 197 0 0 chr5 10373522 10373593 -189256557 + MER2 DNA MER2_type 31 101 -244 5839 234 13 2 chr5 10373594 10375032 -189255118 - L1 LINE L1 -2271 4461 3008 2338 201 2 16 chr5 10375048 10375565 -189254585 + L1 LINE L1 4494 5003 -1729 1842 165 73 3 chr5 10375565 10375905 -189254245 + THE1B LTR MaLR 1 364 0 6542 127 10 52 chr5 10375905 10377005 -189253145 + THE1B-int LTR MaLR 1 1054 -526 1781 121 19 29 chr5 10377006 10377313 -189252837 + L1PB1 LINE L1 5840 6143 -8 277 253 94 44 chr5 10377439 10377651 -189252499 + L1MC/D LINE L1 5555 5773 -629 260 303 58 53 chr5 10377984 10378192 -189251958 - L1MC/D LINE L1 -2034 6168 5960 4683 170 45 8 chr5 10378207 10379227 -189250923 - L1MA7 LINE L1 -5 6286 5228 640 193 135 66 chr5 10379229 10379473 -189250677 - MER2 DNA MER2_type 0 345 85 5717 168 22 6 chr5 10379489 10381460 -189248690 - L1PB1 LINE L1 0 6151 4150 386 282 64 11 chr5 10381467 10381655 -189248495 - L1MC/D LINE L1 -984 5556 5359 286 297 24 36 chr5 10381917 10382082 -189248068 - L1MC/D LINE L1 -4554 2167 2005 407 302 41 18 chr5 10382086 10382255 -189247895 - L1MC/D LINE L1 -4722 1818 1646 4727 166 13 1 chr5 10382545 10383367 -189246783 + L1PA16 LINE L1 5329 6160 -6 242 325 98 41 chr5 10383387 10383581 -189246569 - L2 LINE L2 -101 3212 3008 218 291 13 25 chr5 10383575 10383654 -189246496 + L2 LINE L2 2246 2323 -991 * 3786 160 50 21 chr5 10383655 10384356 -189245794 + MER50 LTR ERV1 1 721 -13 246 270 124 0 chr5 10384372 10384461 -189245689 + L2 LINE L2 2346 2445 -869 747 302 88 36 chr5 10384534 10384954 -189245196 - L1MC/D LINE L1 -5926 795 354 1734 165 132 26 chr5 10385348 10385735 -189244415 + MSTA LTR MaLR 1 428 0 8620 167 11 34 chr5 10385737 10387352 -189242798 + MSTA-int LTR MaLR 3 1580 0 1739 185 125 10 chr5 10387352 10387736 -189242414 + MSTA LTR MaLR 1 428 0 731 203 0 0 chr5 10388176 10388309 -189241841 + FLAM_A SINE Alu 1 133 0 4666 222 54 7 chr5 10388397 10390094 -189240056 - L1MC1 LINE L1 -19 6314 4533 4209 257 37 37 chr5 10390090 10390131 -189240019 - L1MC1 LINE L1 -1899 4247 4207 * 2517 146 41 2 chr5 10390131 10390543 -189239607 + MSTA LTR MaLR 1 428 0 4209 257 37 37 chr5 10390543 10391854 -189238296 - L1MC1 LINE L1 -1939 4207 2892 1500 162 25 0 chr5 10391854 10392138 -189238012 - L1MA3 LINE L1 -2 6303 6013 4209 257 37 37 chr5 10392138 10392506 -189237644 - L1MC1 LINE L1 -3253 2893 2526 2163 180 34 24 chr5 10392506 10392633 -189237517 + MSTA LTR MaLR 2 126 -302 1325 154 57 124 chr5 10392633 10392801 -189237349 + THE1C LTR MaLR 1 179 -196 1855 121 23 4 chr5 10392801 10393066 -189237084 - AluSq SINE Alu -14 299 30 1325 154 57 124 chr5 10393066 10393299 -189236851 + THE1C LTR MaLR 179 375 0 2163 180 34 24 chr5 10393299 10393588 -189236562 + MSTA LTR MaLR 126 422 -6 201 154 0 0 chr5 10393663 10393702 -189236448 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 31 0 0 chr5 10393838 10393870 -189236280 + AT_rich Low_complexity Low_complexity 1 32 0 2150 120 18 20 chr5 10395728 10396070 -189234080 - MER61A LTR ERV1 0 343 3 608 271 81 9 chr5 10396335 10396556 -189233594 + MIR SINE MIR 26 262 0 216 360 105 35 chr5 10396648 10396820 -189233330 - MIR3 SINE MIR -9 199 16 329 371 83 19 chr5 10397739 10398003 -189232147 + L2 LINE L2 2983 3263 -9 2477 101 2 78 chr5 10398141 10398549 -189231601 - MER51B LTR ERV1 0 377 1 1017 304 77 29 chr5 10398763 10399346 -189230804 + L1PBa LINE L1 168 778 -6085 442 101 217 0 chr5 10399346 10399415 -189230735 + THE1B LTR MaLR 1 84 -280 1552 246 33 35 chr5 10399456 10399879 -189230271 + L1PBa LINE L1 1218 1639 -5224 * 6114 215 31 22 chr5 10399848 10402197 -189227953 + L1PB3 LINE L1 5 2450 -3753 9355 194 17 10 chr5 10402202 10405341 -189224809 + L1PB3 LINE L1 3046 6209 -2 2413 86 0 0 chr5 10405680 10405981 -189224169 + AluY SINE Alu 1 301 -10 204 208 42 0 chr5 10407051 10407099 -189223051 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 374 245 141 52 chr5 10407620 10407869 -189222281 - L1M4 LINE L1 -775 5371 5101 192 354 25 56 chr5 10408025 10408186 -189221964 - L2 LINE L2 -499 2815 2660 718 264 123 82 chr5 10408786 10409296 -189220854 - MLT1G LTR MaLR 0 595 5 2056 132 0 3 chr5 10409556 10409843 -189220307 - AluSq SINE Alu -27 286 1 668 226 31 51 chr5 10411026 10411318 -189218832 + pTR5 LTR ERV1 743 1028 -1410 3123 134 22 146 chr5 10411496 10412282 -189217868 + LTR12 LTR ERV1 1 688 0 570 54 14 0 chr5 10412286 10412372 -189217778 + LTR12 LTR ERV1 307 690 -24 28 78 0 29 chr5 10417329 10417432 -189212718 + AT_rich Low_complexity Low_complexity 1 100 0 2301 237 61 15 chr5 10417736 10418322 -189211828 - MLT1E2 LTR MaLR -1 625 13 729 237 6 6 chr5 10419077 10419250 -189210900 - L1MA10 LINE L1 -1 6333 6161 1225 197 0 13 chr5 10420222 10420455 -189209695 - L1MC3 LINE L1 -259 7526 7297 210 71 0 0 chr5 10420455 10420483 -189209667 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 1547 143 13 0 chr5 10420485 10420723 -189209427 - AluSg/x SINE Alu -1 311 71 271 105 0 0 chr5 10420723 10420761 -189209389 - Alu SINE Alu -262 38 1 412 197 0 0 chr5 10420761 10420832 -189209318 - L1MC3 LINE L1 -483 7302 7232 684 264 150 48 chr5 10421838 10422258 -189207892 + LTR33A LTR ERVL 59 521 -2 180 135 0 0 chr5 10422485 10422522 -189207628 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 2230 216 16 26 chr5 10423320 10423825 -189206325 + MER89 LTR ERV1 60 559 0 181 382 0 0 chr5 10424467 10424483 -189205667 + L3 LINE CR1 1508 1523 -54 4524 95 2 0 chr5 10424483 10425074 -189205076 - L1PA13 LINE L1 0 6163 5572 181 382 0 0 chr5 10425074 10425125 -189205025 + L3 LINE CR1 1522 1575 -2 261 324 39 19 chr5 10425476 10425683 -189204467 + L3 LINE CR1 1179 1389 -188 924 221 36 29 chr5 10425710 10425991 -189204159 + L1MC3 LINE L1 7503 7785 0 312 238 143 8 chr5 10426818 10426874 -189203276 - L1MA10 LINE L1 -7 6327 6272 863 275 67 55 chr5 10426874 10427310 -189202840 - L1ME1 LINE L1 -74 6092 5652 5525 39 2 5 chr5 10427310 10427944 -189202206 - L1PA5 LINE L1 0 6154 5523 311 183 0 0 chr5 10427967 10428027 -189202123 - L1ME1 LINE L1 -494 5672 5613 6693 62 32 0 chr5 10478193 10479152 -189150998 - L1PA7 LINE L1 -1 6153 5177 489 81 14 0 chr5 10479152 10479226 -189150924 + L1PA7 LINE L1 5115 5189 -957 21 36 0 0 chr5 10480192 10480220 -189149930 + AT_rich Low_complexity Low_complexity 1 28 0 2471 98 136 2 chr5 10480306 10480703 -189149447 + L1PA14 LINE L1 5709 6158 -3 1768 186 49 46 chr5 10480705 10481181 -189148969 + L1M3 LINE L1 5248 5725 -455 2447 183 37 123 chr5 10481321 10482156 -189147994 + L1MB4 LINE L1 5418 6180 0 1364 116 0 54 chr5 10482290 10482514 -189147636 + AluSq SINE Alu 22 233 -80 1169 241 118 42 chr5 10482971 10483427 -189146723 - MER74A LTR ERVL -63 495 5 2239 156 5 39 chr5 10484393 10484835 -189145315 - L1MA4A LINE L1 -5 7000 6574 13063 194 75 38 chr5 10484935 10485179 -189144971 - L1MA4A LINE L1 -717 6288 6054 414 224 138 17 chr5 10485179 10485295 -189144855 - FLAM_C SINE Alu -2 131 2 13063 194 75 38 chr5 10485295 10491106 -189139044 - L1MA4A LINE L1 -951 6054 1 658 345 109 7 chr5 10493897 10494308 -189135842 - LTR33 LTR ERVL -68 453 1 2702 112 26 24 chr5 10494349 10494770 -189135380 + MSTA LTR MaLR 7 428 0 206 361 56 0 chr5 10494887 10494959 -189135191 + L2 LINE L2 3156 3231 -41 639 176 0 0 chr5 10494978 10495086 -189135064 + FLAM_A SINE Alu 15 122 -20 934 185 9 5 chr5 10495148 10495364 -189134786 - L1MA7 LINE L1 -10 6281 6065 215 195 65 39 chr5 10496124 10496201 -189133949 - MIR SINE MIR -56 206 128 408 337 27 11 chr5 10496412 10496596 -189133554 + MIR SINE MIR 8 194 -68 3173 224 41 0 chr5 10496971 10497649 -189132501 - MER54A LTR ERVL 0 901 196 588 237 179 12 chr5 10497920 10498224 -189131926 + L1MC4a LINE L1 5537 5750 -371 2477 80 0 0 chr5 10498813 10499124 -189131026 + AluY SINE Alu 1 311 0 1747 236 83 18 chr5 10500849 10501418 -189128732 - L1ME1 LINE L1 -20 6146 5541 5608 182 39 11 chr5 10501973 10502374 -189127776 - L1MA8 LINE L1 -96 6195 5807 315 0 0 0 chr5 10502374 10502409 -189127741 + (TG)n Simple_repeat Simple_repeat 2 36 0 5608 182 39 11 chr5 10502409 10503459 -189126691 - L1MA8 LINE L1 -484 5807 4666 225 0 0 0 chr5 10503459 10503484 -189126666 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5608 182 39 11 chr5 10503484 10504031 -189126119 - L1MA8 LINE L1 -1625 4666 4136 5215 25 0 5 chr5 10504163 10504773 -189125377 - L1PA3 LINE L1 -3 6152 5546 1926 312 49 42 chr5 10504789 10505922 -189124228 - L1M3f LINE L1 -4146 1182 41 251 214 18 0 chr5 10506404 10506460 -189123690 + L1ME LINE L1 5821 5877 -287 268 250 40 55 chr5 10506567 10506683 -189123467 - MLT1J2 LTR MaLR -293 157 80 24 0 0 0 chr5 10507260 10507284 -189122866 + AT_rich Low_complexity Low_complexity 1 24 0 2144 247 93 24 chr5 10507574 10508472 -189121678 - L1ME1 LINE L1 -41 6194 5244 2116 143 20 6 chr5 10508474 10508831 -189121319 + THE1B LTR MaLR 3 364 0 3131 105 47 76 chr5 10508831 10509383 -189120767 + THE1B-int LTR MaLR 1 536 -1044 779 60 0 17 chr5 10509379 10509495 -189120655 + THE1B-int LTR MaLR 1461 1574 -6 * 2198 150 14 3 chr5 10509500 10509860 -189120290 + THE1B LTR MaLR 1 364 0 397 246 126 0 chr5 10509878 10510053 -189120097 - L1ME1 LINE L1 -987 5228 5032 439 266 51 59 chr5 10510095 10510211 -189119939 - L1ME1 LINE L1 -4891 1357 1242 2126 135 3 0 chr5 10510211 10510522 -189119628 - AluSx SINE Alu 0 312 1 439 266 51 59 chr5 10510522 10510959 -189119191 - L1ME1 LINE L1 -5006 1242 791 1627 199 30 41 chr5 10511078 10511519 -189118631 + MER65A LTR ERV1 1 436 -9 2459 89 129 5 chr5 10512570 10512964 -189117186 - LTR7 LTR ERV1 -7 443 1 2390 105 69 10 chr5 10512964 10513355 -189116795 - HERVH LTR ERV1 0 7713 7300 1341 136 28 0 chr5 10513338 10513552 -189116598 - HERVH LTR ERV1 -1894 5819 5600 * 4576 127 1 1 chr5 10513553 10514215 -189115935 - HERVH LTR ERV1 -2564 5149 4488 6330 84 2 2 chr5 10514217 10515071 -189115079 - HERVH LTR ERV1 -3720 3993 3140 * 10941 90 8 27 chr5 10515057 10516666 -189113484 - HERVH LTR ERV1 -4721 2992 1415 37553 39 2 3 chr5 10516666 10521975 -189108175 - L1PA4 LINE L1 -2 6153 850 5505 110 24 17 chr5 10521975 10523455 -189106695 - HERVH LTR ERV1 -6283 1430 1 1709 95 4 16 chr5 10523477 10523742 -189106408 - HERVH LTR ERV1 -6953 760 437 183 42 0 0 chr5 10523981 10524005 -189106145 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1322 92 47 15 chr5 10524742 10524995 -189105155 - HERVH LTR ERV1 -6953 760 437 2395 73 7 0 chr5 10526796 10527099 -189103051 + AluY SINE Alu 1 305 -6 588 280 36 10 chr5 10528185 10528378 -189101772 - MIR SINE MIR 0 262 65 873 299 129 6 chr5 10528565 10528929 -189101221 + MER69 DNA AcHobo 102 510 -2016 599 277 103 29 chr5 10528953 10529408 -189100742 + MER69 DNA AcHobo 2011 2499 -27 1293 178 85 90 chr5 10529524 10529568 -189100582 - MLT1A1 LTR MaLR 0 365 322 1880 131 0 0 chr5 10529568 10529836 -189100314 + AluSc SINE Alu 37 304 -5 1293 178 85 90 chr5 10529836 10530157 -189099993 - MLT1A1 LTR MaLR -43 322 2 300 315 0 0 chr5 10530610 10530718 -189099432 + CT-rich Low_complexity Low_complexity 1 108 0 990 237 38 114 chr5 10531494 10531916 -189098234 - MLT1B LTR MaLR 0 390 1 2001 112 36 10 chr5 10532853 10532886 -189097264 - AluY SINE Alu 0 311 280 297 0 0 0 chr5 10532886 10532919 -189097231 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2001 112 36 10 chr5 10532919 10533188 -189096962 - AluY SINE Alu -31 280 1 2097 118 7 10 chr5 10533253 10533549 -189096601 - AluSq SINE Alu -18 295 1 3080 233 17 27 chr5 10534325 10534510 -189095640 + L1M4 LINE L1 4531 4716 -1430 2342 189 26 35 chr5 10534510 10534969 -189095181 - MSTB2 LTR MaLR 0 457 3 3080 233 17 27 chr5 10534969 10535610 -189094540 + L1M4 LINE L1 4716 5349 -797 2197 103 3 29 chr5 10535698 10536010 -189094140 - AluSp SINE Alu -9 304 1 265 193 34 91 chr5 10536011 10536099 -189094051 - L1PA16 LINE L1 -40 6829 6747 4394 215 43 14 chr5 10536199 10538778 -189091372 - L1PA16 LINE L1 -135 6734 2540 1152 129 31 0 chr5 10538781 10538974 -189091176 + L1PA15-16 LINE L1 1740 1938 -4911 3036 154 54 5 chr5 10538974 10539571 -189090579 - L1PA16 LINE L1 -4266 2583 1958 1428 166 169 13 chr5 10539557 10539864 -189090286 - L1PA11 LINE L1 0 6174 5820 * 429 232 32 0 chr5 10539877 10540032 -189090118 + CT-rich Low_complexity Low_complexity 1 160 0 8870 197 83 16 chr5 10540035 10541779 -189088371 - L1PA16 LINE L1 -4870 1979 119 2355 135 30 16 chr5 10541779 10542149 -189088001 + THE1C LTR MaLR 1 375 0 9640 136 37 15 chr5 10542149 10543689 -189086461 + THE1C-int LTR MaLR 1 1574 -6 2280 141 35 16 chr5 10543694 10544062 -189086088 + THE1C LTR MaLR 1 375 0 864 84 34 0 chr5 10544062 10544181 -189085969 - L1PA16 LINE L1 -6726 123 1 * 3204 224 44 6 chr5 10544175 10544971 -189085179 + L1MB7 LINE L1 5317 6142 -42 189 0 0 0 chr5 10545588 10545609 -189084541 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 301 185 99 12 chr5 10549927 10550008 -189080142 + L1MCa LINE L1 1977 2064 -4362 189 0 0 0 chr5 10551433 10551454 -189078696 + (A)n Simple_repeat Simple_repeat 1 21 0 2090 134 3 3 chr5 10554190 10554496 -189075654 - AluJb SINE Alu -6 306 1 311 193 12 0 chr5 10555617 10555700 -189074450 + GA-rich Low_complexity Low_complexity 4 87 0 2151 113 3 3 chr5 10560248 10560552 -189069598 - AluSp SINE Alu 0 305 2 257 255 10 88 chr5 10563726 10563828 -189066322 + MIR SINE MIR 50 143 -65 312 324 28 34 chr5 10563992 10564171 -189065979 + MER46C DNA MER2_type 159 336 -2 192 279 9 90 chr5 10564173 10564284 -189065866 + MIR SINE MIR 153 254 -8 219 36 0 0 chr5 10564540 10564568 -189065582 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1808 146 3 14 chr5 10564621 10564934 -189065216 - AluSx SINE Alu 0 310 1 656 257 27 16 chr5 10565510 10565697 -189064453 - MER5A DNA MER1_type 0 189 1 24 0 0 0 chr5 10571338 10571362 -189058788 + AT_rich Low_complexity Low_complexity 1 24 0 4864 152 10 12 chr5 10571662 10571908 -189058242 + L1MB1 LINE L1 5361 5606 -562 1897 154 3 0 chr5 10571908 10572207 -189057943 + AluSx SINE Alu 1 300 -12 4864 152 10 12 chr5 10572207 10572770 -189057380 + L1MB1 LINE L1 5606 6168 0 21 71 0 0 chr5 10573621 10573663 -189056487 + AT_rich Low_complexity Low_complexity 1 42 0 279 59 0 0 chr5 10574636 10574684 -189055466 - L1PA2 LINE L1 0 6155 6107 1937 173 0 0 chr5 10575017 10575318 -189054832 - AluSx SINE Alu -11 301 1 210 189 19 19 chr5 10576250 10576303 -189053847 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 282 238 12 36 chr5 10576831 10576915 -189053235 - L2 LINE L2 -32 3281 3200 381 211 96 29 chr5 10577530 10577634 -189052516 - ORSL DNA AcHobo -1 274 164 1490 215 18 0 chr5 10577922 10578229 -189051921 - AluJo SINE Alu 0 312 1 2431 99 3 3 chr5 10579793 10580126 -189050024 + L1PA7 LINE L1 5675 6007 -147 526 146 73 0 chr5 10580126 10580222 -189049928 + AluJb SINE Alu 208 310 -2 193 370 65 7 chr5 10581228 10581366 -189048784 - MIR SINE MIR -116 146 1 225 0 0 0 chr5 10583048 10583073 -189047077 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 1814 280 88 53 chr5 10583154 10584227 -189045923 - HAL1 LINE L1 -1156 1351 241 2520 225 23 8 chr5 10584238 10584758 -189045392 - MER68 LTR ERV1 0 562 35 21 0 0 0 chr5 10585050 10585071 -189045079 + AT_rich Low_complexity Low_complexity 1 21 0 2375 96 0 0 chr5 10585556 10585859 -189044291 + AluSx SINE Alu 1 303 -9 2550 278 49 35 chr5 10587542 10588490 -189041660 + L1ME1 LINE L1 38 772 -4925 4568 242 107 31 chr5 10588507 10590284 -189039866 + L1ME1 LINE L1 3656 5565 -757 1868 245 47 38 chr5 10590676 10591309 -189038841 + L1ME1 LINE L1 5592 6230 -5 2453 89 0 0 chr5 10591392 10591695 -189038455 + AluSc SINE Alu 1 303 -6 1401 184 20 13 chr5 10591701 10592095 -189038055 + L1MA4A LINE L1 5823 6280 -23 369 0 0 0 chr5 10592336 10592377 -189037773 + (TG)n Simple_repeat Simple_repeat 2 42 0 225 0 0 0 chr5 10594055 10594080 -189036070 + (CA)n Simple_repeat Simple_repeat 2 26 0 207 157 20 20 chr5 10594453 10594504 -189035646 + A-rich Low_complexity Low_complexity 2 52 0 2449 95 0 11 chr5 10594626 10594975 -189035175 + L1PA7 LINE L1 2739 3083 -3063 7180 63 10 8 chr5 10594976 10596022 -189034128 + L1PA7 LINE L1 5108 6154 0 1386 258 119 39 chr5 10596333 10596871 -189033279 + MLT1E LTR MaLR 13 593 0 261 219 0 0 chr5 10596875 10596948 -189033202 + (TA)n Simple_repeat Simple_repeat 1 73 0 265 294 50 17 chr5 10598047 10598166 -189031984 + MIR SINE MIR 103 225 -37 387 60 0 0 chr5 10599041 10599091 -189031059 + (TCCA)n Simple_repeat Simple_repeat 3 52 0 2388 136 43 14 chr5 10599826 10600178 -189029972 + THE1B LTR MaLR 1 362 -2 12469 92 14 0 chr5 10600180 10601738 -189028412 + THE1B-int LTR MaLR 1 1579 -1 1324 125 64 53 chr5 10601739 10602023 -189028127 + THE1B LTR MaLR 1 284 -91 296 100 0 0 chr5 10602131 10602171 -189027979 + THE1B LTR MaLR 316 355 0 207 188 0 0 chr5 10603045 10603093 -189027057 + T-rich Low_complexity Low_complexity 2 49 0 2095 98 9 67 chr5 10603527 10603855 -189026295 + AluSc SINE Alu 1 309 0 189 0 0 0 chr5 10604153 10604174 -189025976 + (TA)n Simple_repeat Simple_repeat 2 22 0 206 323 71 55 chr5 10604583 10604710 -189025440 + L2 LINE L2 3123 3251 -21 671 284 15 61 chr5 10605134 10605461 -189024689 - L1M4 LINE L1 -1981 4165 3854 347 294 70 80 chr5 10605587 10605774 -189024376 + MER91A DNA MER1_type 12 196 0 283 326 10 0 chr5 10606162 10606260 -189023890 - L2 LINE L2 -15 3298 3200 2108 112 47 0 chr5 10608945 10609241 -189020909 + AluSg SINE Alu 1 310 0 2167 81 3 14 chr5 10610645 10610929 -189019221 + L1PA7 LINE L1 5873 6153 -1 391 219 202 0 chr5 10611471 10611654 -189018496 - MIR SINE MIR -30 232 13 1451 206 19 3 chr5 10612276 10612583 -189017567 - L1P2 LINE L1 -397 5758 5452 * 1498 213 47 30 chr5 10612577 10612925 -189017225 - L1MA9 LINE L1 -174 6138 5781 369 0 0 0 chr5 10612925 10612966 -189017184 + (TG)n Simple_repeat Simple_repeat 2 42 0 1498 213 47 30 chr5 10612966 10613021 -189017129 - L1MA9 LINE L1 -531 5781 5728 1085 177 18 29 chr5 10613018 10613316 -189016834 + L1M2 LINE L1 5193 5489 -698 * 403 266 31 16 chr5 10613317 10613445 -189016705 + L1MA9 LINE L1 6145 6274 -38 1903 149 22 0 chr5 10614332 10614650 -189015500 + AluSx SINE Alu 1 324 0 344 221 87 29 chr5 10617208 10617312 -189012838 + MER91C DNA MER1_type 24 133 -7 331 315 8 24 chr5 10617723 10617850 -189012300 + MIR SINE MIR 112 236 -26 21 57 0 0 chr5 10618938 10618973 -189011177 + AT_rich Low_complexity Low_complexity 1 35 0 446 350 23 18 chr5 10620484 10620701 -189009449 + MIR SINE MIR 39 256 -6 196 237 219 18 chr5 10621385 10621499 -189008651 - MIR3 SINE MIR -60 148 12 27 29 0 0 chr5 10623091 10623125 -189007025 + AT_rich Low_complexity Low_complexity 1 34 0 2750 13 0 22 chr5 10625396 10625712 -189004438 - AluYa5 SINE Alu -2 309 1 1750 253 104 8 chr5 10629069 10629590 -189000560 + MLT1E LTR MaLR 8 578 -15 434 278 43 16 chr5 10629604 10629791 -189000359 + MLT1E-int LTR MaLR 6 197 -1174 488 181 23 38 chr5 10629824 10629957 -189000193 + L1MA8 LINE L1 6142 6272 -19 3675 180 28 25 chr5 10629977 10630834 -188999316 + L1MB4 LINE L1 5296 6155 -25 713 277 62 10 chr5 10630884 10631173 -188998977 + MLT1E-int LTR MaLR 313 616 -755 404 298 56 120 chr5 10631391 10632110 -188998040 + MLT1E-int LTR MaLR 692 1364 -7 1981 246 78 25 chr5 10632119 10632680 -188997470 + MLT1E LTR MaLR 3 593 0 1836 168 22 11 chr5 10633744 10634101 -188996049 - MER46B DNA MER2_type 0 236 1 26 0 0 0 chr5 10636273 10636299 -188993851 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 10636308 10636330 -188993820 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr5 10636452 10636492 -188993658 + AT_rich Low_complexity Low_complexity 1 40 0 27 73 0 0 chr5 10636704 10636759 -188993391 + AT_rich Low_complexity Low_complexity 1 55 0 28 71 0 0 chr5 10636992 10637048 -188993102 + AT_rich Low_complexity Low_complexity 1 56 0 2155 105 7 0 chr5 10637158 10637452 -188992698 - AluSx SINE Alu -16 296 1 22 0 0 0 chr5 10638486 10638508 -188991642 + AT_rich Low_complexity Low_complexity 1 22 0 2340 69 3 16 chr5 10639348 10639652 -188990498 + AluY SINE Alu 1 300 -11 384 209 0 0 chr5 10639755 10639841 -188990309 + GA-rich Low_complexity Low_complexity 2 87 0 2137 119 3 0 chr5 10640824 10641110 -188989040 - AluSx SINE Alu -25 287 1 1925 115 0 17 chr5 10641677 10641964 -188988186 - L1PA8 LINE L1 0 6172 5891 547 260 91 57 chr5 10642860 10643260 -188986890 - LTR8A LTR ERV1 -19 667 280 317 236 46 50 chr5 10643417 10643589 -188986561 - MER87 LTR ERV1 -395 146 1 1295 156 22 6 chr5 10643620 10644007 -188986143 + LTR47B LTR ERVL 1 443 0 181 390 26 0 chr5 10644123 10644200 -188985950 + MIR3 SINE MIR 109 187 -21 633 255 57 38 chr5 10644593 10644856 -188985294 + MLT1L LTR MaLR 127 394 -221 1089 157 52 9 chr5 10645158 10645368 -188984782 - MER20 DNA MER1_type 0 219 1 516 244 161 0 chr5 10646106 10646311 -188983839 - MIR SINE MIR -12 250 13 322 370 19 19 chr5 10646864 10647026 -188983124 + MIR SINE MIR 69 230 -32 1700 183 59 67 chr5 10647457 10647685 -188982465 - MSTB LTR MaLR -5 421 196 2475 77 0 0 chr5 10647685 10647996 -188982154 + AluY SINE Alu 1 311 0 1700 183 59 67 chr5 10647996 10648188 -188981962 - MSTB LTR MaLR -230 196 4 788 227 146 57 chr5 10648644 10648979 -188981171 + MLT1A1 LTR MaLR 1 365 0 281 298 78 7 chr5 10649340 10649481 -188980669 + MER104 DNA Tc2 29 179 -1 1795 174 3 25 chr5 10650130 10650198 -188979952 - AluJo SINE Alu -3 309 241 1793 155 64 25 chr5 10650198 10650559 -188979591 + THE1C LTR MaLR 1 375 0 1795 174 3 25 chr5 10650559 10650806 -188979344 - AluJo SINE Alu -71 241 1 2595 52 0 3 chr5 10651534 10651839 -188978311 - AluY SINE Alu -7 304 1 311 267 0 0 chr5 10653478 10653553 -188976597 - MIR SINE MIR -110 152 78 258 303 55 85 chr5 10654234 10654399 -188975751 - MIR SINE MIR -26 236 77 219 273 0 0 chr5 10654716 10654771 -188975379 + (TA)n Simple_repeat Simple_repeat 1 55 0 235 319 30 15 chr5 10654843 10654978 -188975172 - L1MC/D LINE L1 -1907 5901 5765 4155 97 24 14 chr5 10655011 10655639 -188974511 - L1PB1 LINE L1 -1 6150 5517 21 0 0 0 chr5 10656594 10656615 -188973535 + AT_rich Low_complexity Low_complexity 1 21 0 371 145 0 0 chr5 10657750 10657819 -188972331 + L1MA7 LINE L1 6193 6261 -30 364 306 79 81 chr5 10658399 10658817 -188971333 - L2 LINE L2 -8 3264 2848 1517 165 68 11 chr5 10659087 10659377 -188970773 + AluSx SINE Alu 1 305 0 206 258 65 0 chr5 10659488 10659550 -188970600 + MIR SINE MIR 124 189 -73 22 0 0 0 chr5 10659859 10659881 -188970269 + AT_rich Low_complexity Low_complexity 1 22 0 201 273 0 0 chr5 10661422 10661477 -188968673 + T-rich Low_complexity Low_complexity 1 55 0 199 305 179 0 chr5 10661707 10661802 -188968348 - MIR SINE MIR -131 131 20 2040 132 13 20 chr5 10662044 10662347 -188967803 - AluSx SINE Alu -11 301 1 210 418 27 0 chr5 10663086 10663196 -188966954 + L2 LINE L2 3143 3255 -17 1867 126 70 0 chr5 10663686 10663972 -188966178 - AluSg SINE Alu -4 306 1 206 118 0 0 chr5 10664111 10664145 -188966005 + (A)n Simple_repeat Simple_repeat 1 34 0 1274 268 89 37 chr5 10664782 10665115 -188965035 + REP3 LTR ERV 27 395 -167 2153 114 0 0 chr5 10665115 10665422 -188964728 - AluSx SINE Alu 0 307 1 1274 268 89 37 chr5 10665422 10665572 -188964578 + REP3 LTR ERV 395 536 -26 584 212 66 7 chr5 10665573 10665710 -188964440 + MER58B DNA MER1_type 192 336 -5 2180 130 3 0 chr5 10665764 10666071 -188964079 + AluSx SINE Alu 1 308 -4 748 200 8 0 chr5 10666415 10666540 -188963610 - FLAM_C SINE Alu -16 127 2 244 272 37 88 chr5 10667390 10667526 -188962624 + MIR SINE MIR 46 174 -88 2176 112 14 3 chr5 10669192 10669487 -188960663 + AluSx SINE Alu 1 298 -14 2174 133 0 0 chr5 10670167 10670468 -188959682 + AluSx SINE Alu 1 301 -11 447 68 0 0 chr5 10670468 10670480 -188959670 + (TG)n Simple_repeat Simple_repeat 1 71 0 447 68 0 0 chr5 10670480 10670539 -188959611 + (TG)n Simple_repeat Simple_repeat 2 60 0 362 314 80 7 chr5 10671200 10671337 -188958813 + MER5B DNA MER1_type 29 175 -3 243 348 70 21 chr5 10674326 10674513 -188955637 + L2 LINE L2 3117 3312 -1 790 147 159 0 chr5 10675313 10675476 -188954674 - MER53 DNA DNA 0 189 1 5574 81 7 19 chr5 10675851 10676605 -188953545 + L1PA8A LINE L1 5387 6131 0 22 0 0 0 chr5 10677039 10677061 -188953089 + AT_rich Low_complexity Low_complexity 1 22 0 886 176 99 43 chr5 10677747 10678049 -188952101 - MER33 DNA MER1_type -1 323 5 265 328 50 17 chr5 10678235 10678354 -188951796 - MIR3 SINE MIR -50 158 36 410 180 22 0 chr5 10678787 10678876 -188951274 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 228 277 116 9 chr5 10679047 10679159 -188950991 - MIR3 SINE MIR -1 207 84 2239 167 24 0 chr5 10679884 10680256 -188949894 + MLT1B LTR MaLR 1 381 -9 439 116 40 36 chr5 10680275 10680579 -188949571 + (TA)n Simple_repeat Simple_repeat 1 305 0 281 218 30 99 chr5 10682432 10682533 -188947617 + L2 LINE L2 3196 3289 -24 248 302 171 24 chr5 10682554 10682759 -188947391 + MIR SINE MIR 28 262 0 207 262 24 60 chr5 10684503 10684587 -188945563 - MER5B DNA MER1_type -71 107 27 1133 162 11 109 chr5 10685290 10685574 -188944576 + L1MA9 LINE L1 6032 6287 -25 1703 195 22 30 chr5 10686720 10687084 -188943066 + MLT1A1 LTR MaLR 5 365 0 180 0 0 0 chr5 10689538 10689558 -188940592 + (T)n Simple_repeat Simple_repeat 1 20 0 2024 177 28 14 chr5 10689621 10689977 -188940173 - MLT1A1 LTR MaLR -4 361 1 1992 244 58 70 chr5 10692187 10692844 -188937306 + MLT1E1 LTR MaLR 6 654 0 1966 125 10 16 chr5 10694573 10694885 -188935265 - AluSg SINE Alu 0 310 1 1562 227 66 37 chr5 10696099 10696553 -188933597 - MLT1C LTR MaLR 0 467 1 216 264 170 50 chr5 10698327 10698486 -188931664 + L2 LINE L2 3077 3254 -59 195 317 59 10 chr5 10698541 10698642 -188931508 + L2 LINE L2 2431 2536 -778 545 226 123 64 chr5 10698652 10698856 -188931294 - MER106A DNA MER1_type 0 236 21 234 328 46 36 chr5 10699045 10699240 -188930910 + L2 LINE L2 2625 2821 -493 569 329 62 26 chr5 10700391 10700813 -188929337 - HAL1b LINE L1 -829 519 83 1585 218 0 0 chr5 10701188 10701486 -188928664 - AluJo SINE Alu -14 298 1 510 149 184 0 chr5 10701846 10701960 -188928190 - L1MB7 LINE L1 -1 6183 6049 953 207 76 11 chr5 10702950 10703225 -188926925 - L1MA4 LINE L1 -3 6297 6005 1747 171 48 25 chr5 10704263 10704619 -188925531 + MLT1A1 LTR MaLR 2 365 0 221 294 109 23 chr5 10705061 10705326 -188924824 + L2 LINE L2 1702 1989 -1325 312 286 40 48 chr5 10705514 10705640 -188924510 + L2 LINE L2 3171 3295 -18 265 282 19 19 chr5 10707361 10707464 -188922686 + GA-rich Low_complexity Low_complexity 2 104 0 204 306 52 60 chr5 10708441 10708575 -188921575 + MIR SINE MIR 80 212 -50 1946 139 0 0 chr5 10709829 10710132 -188920018 + AluSg1 SINE Alu 1 303 0 1576 180 17 20 chr5 10711383 10711683 -188918467 - AluJo SINE Alu -13 299 1 229 374 80 0 chr5 10712124 10712311 -188917839 + MIR SINE MIR 28 229 -33 1124 244 69 41 chr5 10712394 10712758 -188917392 + MLT1A2 LTR MaLR 1 374 0 219 330 117 10 chr5 10712777 10712880 -188917270 + MIR3 SINE MIR 93 206 -2 744 33 0 0 chr5 10713936 10714027 -188916123 + (TG)n Simple_repeat Simple_repeat 2 92 0 446 311 137 5 chr5 10714484 10714696 -188915454 - MIR SINE MIR -13 249 10 216 296 80 0 chr5 10715229 10715317 -188914833 - MIR SINE MIR -117 145 51 447 267 9 26 chr5 10717122 10717238 -188912912 + MER81 DNA DNA 1 114 0 180 77 0 0 chr5 10720436 10720462 -188909688 + (CAA)n Simple_repeat Simple_repeat 2 27 0 607 241 89 11 chr5 10720739 10720950 -188909200 - MIR SINE MIR 0 262 36 2126 154 0 40 chr5 10720957 10721308 -188908842 + MER1B DNA MER1_type 1 337 0 185 175 25 25 chr5 10723140 10723180 -188906970 + MIR SINE MIR 223 262 0 414 0 0 0 chr5 10723343 10723389 -188906761 + (TA)n Simple_repeat Simple_repeat 1 46 0 2270 110 3 0 chr5 10723438 10723739 -188906411 - AluSp SINE Alu -11 302 1 21 0 0 0 chr5 10724019 10724040 -188906110 + AT_rich Low_complexity Low_complexity 1 21 0 629 13 13 0 chr5 10724106 10724184 -188905966 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 229 336 78 9 chr5 10724272 10724388 -188905762 + MIR SINE MIR 67 190 -72 307 304 9 9 chr5 10726110 10726225 -188903925 + MER94 DNA DNA 2 116 -18 182 345 0 0 chr5 10726657 10726715 -188903435 - L3b LINE CR1 -340 1243 1186 214 303 123 58 chr5 10726902 10727057 -188903093 + MIR SINE MIR 20 184 -78 353 354 39 8 chr5 10728984 10729114 -188901036 - L2 LINE L2 -2 3270 3137 1945 196 3 8 chr5 10729134 10729501 -188900649 - MLT1A1 LTR MaLR 0 365 1 533 293 131 38 chr5 10729508 10729836 -188900314 - L2 LINE L2 0 3313 2936 813 275 28 0 chr5 10729836 10730054 -188900096 + MER58A DNA MER1_type 1 224 0 533 293 131 38 chr5 10730054 10730145 -188900005 - L2 LINE L2 -377 2936 2855 960 218 150 35 chr5 10731585 10731952 -188898198 + MLT1C LTR MaLR 1 409 -58 7012 196 20 50 chr5 10731952 10734221 -188895929 - L1PA12 LINE L1 -2795 4789 2604 1471 139 0 8 chr5 10734221 10734473 -188895677 + L1PA14 LINE L1 5910 6159 -2 350 176 14 14 chr5 10734487 10734561 -188895589 + MLT1C LTR MaLR 394 467 0 288 304 0 38 chr5 10735122 10735201 -188894949 - L2 LINE L2 0 3272 3197 288 318 86 20 chr5 10735209 10735360 -188894790 - MIR SINE MIR -13 249 89 2197 162 13 8 chr5 10735655 10736043 -188894107 + MLT1B LTR MaLR 1 390 0 2468 128 5 3 chr5 10736230 10736619 -188893531 + L1PB2 LINE L1 5761 6150 -1 288 98 20 0 chr5 10736658 10736709 -188893441 + L1PB2 LINE L1 6099 6150 -1 288 98 20 0 chr5 10736748 10736799 -188893351 + L1PB2 LINE L1 6099 6150 -1 2633 42 0 0 chr5 10737552 10737859 -188892291 - AluY SINE Alu -4 307 1 897 220 4 60 chr5 10739647 10739879 -188890271 + MER20 DNA MER1_type 1 219 0 180 111 0 0 chr5 10740004 10740031 -188890119 + (TG)n Simple_repeat Simple_repeat 1 27 0 349 309 93 27 chr5 10740268 10740527 -188889623 + MLT1L LTR MaLR 330 605 -10 2145 100 0 42 chr5 10741532 10741843 -188888307 + AluY SINE Alu 3 300 -11 337 304 58 12 chr5 10742174 10742345 -188887805 + MIR SINE MIR 64 242 -20 30 0 0 0 chr5 10742755 10742785 -188887365 + AT_rich Low_complexity Low_complexity 1 30 0 38 0 0 0 chr5 10743232 10743270 -188886880 + AT_rich Low_complexity Low_complexity 1 38 0 2470 70 0 0 chr5 10743811 10744111 -188886039 - AluY SINE Alu -11 300 1 218 313 63 115 chr5 10744305 10744730 -188885420 - L2 LINE L2 -2 3270 2868 306 291 67 67 chr5 10744761 10744971 -188885179 - L2 LINE L2 -542 2772 2563 897 129 7 21 chr5 10745211 10745351 -188884799 - AluJb SINE Alu -174 138 1 1787 161 0 49 chr5 10746237 10746561 -188883589 - AluJb SINE Alu -3 309 2 2063 128 13 13 chr5 10747446 10747752 -188882398 + AluSx SINE Alu 1 306 -6 229 284 11 49 chr5 10748750 10748933 -188881217 + (TATATG)n Simple_repeat Simple_repeat 2 177 0 290 275 12 0 chr5 10751651 10751731 -188878419 + MER20 DNA MER1_type 138 218 -1 239 228 22 43 chr5 10752002 10752094 -188878056 + GA-rich Low_complexity Low_complexity 4 93 0 2332 122 34 0 chr5 10752103 10752455 -188877695 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr5 10753687 10753716 -188876434 + AT_rich Low_complexity Low_complexity 1 29 0 300 232 12 24 chr5 10753918 10754000 -188876150 - L1ME4a LINE L1 -185 5936 5856 33 43 0 0 chr5 10754523 10754570 -188875580 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 10757213 10757234 -188872916 + AT_rich Low_complexity Low_complexity 1 21 0 255 247 94 12 chr5 10757536 10757621 -188872529 - L2 LINE L2 -2 3311 3220 1326 156 8 16 chr5 10758779 10759029 -188871121 + L1PB1 LINE L1 5900 6147 -4 1456 226 94 5 chr5 10759344 10759768 -188870382 - MLT1C LTR MaLR 0 467 6 470 268 168 9 chr5 10759865 10760085 -188870065 - MIR SINE MIR 0 262 8 409 323 137 20 chr5 10760433 10760770 -188869380 + L2 LINE L2 2664 3037 -276 430 283 36 7 chr5 10760812 10760950 -188869200 + L2 LINE L2 3171 3312 -1 1116 222 44 4 chr5 10761299 10761547 -188868603 + Tigger7 DNA MER2_type 10 267 -466 527 165 0 10 chr5 10761546 10761643 -188868507 + Tigger7 DNA MER2_type 2390 2485 -2 * 23 33 0 0 chr5 10761789 10761819 -188868331 + AT_rich Low_complexity Low_complexity 1 30 0 1091 233 93 77 chr5 10764737 10765230 -188864920 + MLT1D LTR MaLR 5 505 0 2724 167 39 6 chr5 10765347 10765880 -188864270 + MER34C LTR ERV1 35 585 0 199 310 60 114 chr5 10765943 10766127 -188864023 - L2 LINE L2 -180 3092 2919 1094 261 72 19 chr5 10767189 10767565 -188862585 + MSTD LTR MaLR 1 396 0 440 284 62 40 chr5 10768106 10768282 -188861868 - MIR SINE MIR -67 195 16 229 191 0 0 chr5 10770398 10770440 -188859710 - L2 LINE L2 -4 3309 3268 1184 331 118 28 chr5 10771773 10773013 -188857137 + L2 LINE L2 1954 3313 0 365 278 136 6 chr5 10774829 10774998 -188855152 + MIR SINE MIR 48 238 -24 2022 128 6 25 chr5 10775058 10775377 -188854773 - AluSq SINE Alu 0 313 1 2276 28 0 0 chr5 10775592 10775880 -188854270 - L1HS LINE L1 -3279 2867 2580 20403 20 0 0 chr5 10775880 10779165 -188850985 + L1HS LINE L1 2871 6155 0 31 44 0 0 chr5 10779165 10779210 -188850940 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr5 10779213 10779235 -188850915 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 2103 138 0 53 chr5 10779495 10779851 -188850299 + MER1B DNA MER1_type 1 337 0 221 232 11 63 chr5 10780556 10780651 -188849499 + GA-rich Low_complexity Low_complexity 5 94 0 2000 243 18 6 chr5 10781425 10781936 -188848214 + LTR53 LTR ERVL 3 519 0 247 261 52 70 chr5 10783244 10783359 -188846791 - MIR SINE MIR -118 144 32 318 375 53 33 chr5 10783558 10783918 -188846232 - L3 LINE CR1 -78 1499 1133 325 255 33 85 chr5 10783961 10784173 -188845977 + L1MC5 LINE L1 7725 7925 -36 21 71 0 0 chr5 10784254 10784296 -188845854 + AT_rich Low_complexity Low_complexity 1 42 0 265 324 39 10 chr5 10785687 10785789 -188844361 + MIR SINE MIR 53 157 -105 24 32 0 0 chr5 10785970 10786001 -188844149 + AT_rich Low_complexity Low_complexity 1 31 0 2178 226 59 6 chr5 10786148 10786675 -188843475 + MER68 LTR ERV1 1 555 -7 395 280 10 0 chr5 10787114 10787214 -188842936 + MER58 DNA MER1_type 10 110 -231 1813 151 133 21 chr5 10787253 10787636 -188842514 + MSTA LTR MaLR 1 426 -2 1016 166 10 5 chr5 10787640 10787839 -188842311 + MSTA-int LTR MaLR 3 202 -1378 29606 100 20 57 chr5 10787850 10794228 -188835922 + L1PA7 LINE L1 12 6153 -1 470 231 48 27 chr5 10794229 10794376 -188835774 - LTR49-int LTR ERV1 -3124 3207 3058 7603 150 5 34 chr5 10794387 10795810 -188834340 + MSTA-int LTR MaLR 200 1580 0 1820 147 124 48 chr5 10795810 10796206 -188833944 + MSTA LTR MaLR 1 426 -2 231 297 117 14 chr5 10796610 10796755 -188833395 - MIR3 SINE MIR -23 185 26 327 241 60 0 chr5 10797240 10797323 -188832827 - MIR SINE MIR -50 212 125 829 210 95 5 chr5 10797606 10797806 -188832344 + MER20 DNA MER1_type 1 218 -1 2075 113 39 0 chr5 10798081 10798365 -188831785 - AluSg1 SINE Alu -14 295 1 249 257 135 0 chr5 10799045 10799119 -188831031 + MLT1D LTR MaLR 2 85 -541 936 204 9 18 chr5 10799159 10799384 -188830766 + MLT1D LTR MaLR 283 505 0 1952 236 165 5 chr5 10799388 10799951 -188830199 - MLT1E1 LTR MaLR -1 653 1 385 110 79 18 chr5 10800236 10800400 -188829750 + (TAGA)n Simple_repeat Simple_repeat 4 177 0 909 159 5 15 chr5 10802106 10802301 -188827849 + L1MA4 LINE L1 6101 6293 -7 24 0 0 0 chr5 10802601 10802625 -188827525 + AT_rich Low_complexity Low_complexity 1 24 0 246 105 0 0 chr5 10802960 10802998 -188827152 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 67 0 0 chr5 10803719 10803764 -188826386 + AT_rich Low_complexity Low_complexity 1 45 0 909 262 5 0 chr5 10803861 10804075 -188826075 + MER58A DNA MER1_type 1 215 -9 21 0 0 0 chr5 10804968 10804989 -188825161 + AT_rich Low_complexity Low_complexity 1 21 0 751 274 64 24 chr5 10805321 10805680 -188824470 - Charlie7 DNA MER1_type 0 2612 2149 1820 106 23 0 chr5 10805680 10805936 -188824214 + AluY SINE Alu 39 300 -11 751 274 64 24 chr5 10805936 10806153 -188823997 - Charlie7 DNA MER1_type -463 2149 1942 21 0 0 0 chr5 10806185 10806206 -188823944 + AT_rich Low_complexity Low_complexity 1 21 0 2782 107 46 7 chr5 10806310 10806768 -188823382 - L1PB1 LINE L1 0 6151 5676 284 272 35 18 chr5 10807002 10807116 -188823034 - Charlie7 DNA MER1_type -1010 1602 1487 286 232 30 30 chr5 10807192 10807291 -188822859 - Charlie7 DNA MER1_type -2383 229 131 180 336 109 34 chr5 10807376 10807495 -188822655 + MER5A DNA MER1_type 22 149 -40 371 298 105 11 chr5 10807498 10807777 -188822373 + MLT1H1 LTR MaLR 1 263 -292 344 88 18 0 chr5 10807839 10807896 -188822254 + (GA)n Simple_repeat Simple_repeat 1 58 0 390 196 52 0 chr5 10808059 10808156 -188821994 + MLT1H1 LTR MaLR 454 555 0 465 203 95 42 chr5 10808582 10808740 -188821410 - MIR SINE MIR -61 201 35 1183 162 5 18 chr5 10809021 10809243 -188820907 + MER20 DNA MER1_type 1 219 0 209 213 0 0 chr5 10811046 10811093 -188819057 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 187 318 82 45 chr5 10811403 10811513 -188818637 - MER5A DNA MER1_type -40 149 36 214 116 0 47 chr5 10811778 10811821 -188818329 + (GGA)n Simple_repeat Simple_repeat 2 42 0 304 357 132 0 chr5 10811840 10812067 -188818083 + MIR SINE MIR 5 261 -1 21 0 0 0 chr5 10812562 10812583 -188817567 + AT_rich Low_complexity Low_complexity 1 21 0 441 129 0 0 chr5 10813409 10813479 -188816671 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 864 174 177 119 chr5 10813550 10813795 -188816355 + MLT1A1 LTR MaLR 2 274 -91 1673 190 0 29 chr5 10813795 10814105 -188816045 - AluJb SINE Alu -2 310 10 864 174 177 119 chr5 10814105 10814203 -188815947 + MLT1A1 LTR MaLR 274 365 0 1500 190 62 60 chr5 10814293 10814757 -188815393 + MLT1C LTR MaLR 3 467 0 249 188 0 21 chr5 10815405 10815453 -188814697 - L3 LINE CR1 -5 1572 1526 1709 151 15 4 chr5 10816308 10816580 -188813570 - AluJb SINE Alu -37 275 1 344 219 14 0 chr5 10816612 10816685 -188813465 + MER20 DNA MER1_type 146 219 0 1103 218 100 50 chr5 10816841 10817281 -188812869 + MLT1C LTR MaLR 6 467 0 1568 215 81 39 chr5 10818052 10818535 -188811615 - MLT1D LTR MaLR -2 503 1 222 37 0 0 chr5 10819329 10819356 -188810794 + (CA)n Simple_repeat Simple_repeat 2 28 0 2221 71 0 0 chr5 10819369 10819637 -188810513 - AluY SINE Alu -15 296 29 817 185 6 0 chr5 10819812 10819990 -188810160 + L1MA6 LINE L1 6111 6289 -11 24 32 0 0 chr5 10820081 10820112 -188810038 + AT_rich Low_complexity Low_complexity 1 31 0 249 254 16 25 chr5 10820820 10820942 -188809208 - HAL1 LINE L1 -117 2390 2270 788 290 82 22 chr5 10820956 10821408 -188808742 - HAL1 LINE L1 -273 2234 1756 298 191 186 55 chr5 10821442 10821678 -188808472 - HAL1 LINE L1 -1333 1174 908 294 237 0 0 chr5 10821963 10822039 -188808111 + (TA)n Simple_repeat Simple_repeat 1 76 0 320 294 29 44 chr5 10822087 10822223 -188807927 - HAL1 LINE L1 -2012 495 362 484 294 69 40 chr5 10822273 10822800 -188807350 - L1MDa LINE L1 -4830 1710 1244 390 282 17 0 chr5 10822883 10823000 -188807150 - LTR16A1 LTR ERVL -318 139 21 953 266 83 32 chr5 10824408 10824840 -188805310 + LTR16A1 LTR ERVL 3 456 -1 494 310 33 5 chr5 10824951 10825135 -188805015 + MIR SINE MIR 31 219 -43 255 299 39 0 chr5 10825415 10825492 -188804658 - MIR SINE MIR -77 131 52 411 238 81 31 chr5 10825655 10825815 -188804335 + MLT1J2 LTR MaLR 64 231 -219 217 322 0 0 chr5 10826347 10826406 -188803744 - L2 LINE L2 0 3313 3255 429 171 67 98 chr5 10826407 10826571 -188803579 - MER58B DNA MER1_type -8 333 175 25 31 0 0 chr5 10826799 10826831 -188803319 + AT_rich Low_complexity Low_complexity 1 32 0 28 29 0 0 chr5 10826971 10827006 -188803144 + AT_rich Low_complexity Low_complexity 1 35 0 444 152 30 0 chr5 10827074 10827173 -188802977 + (TA)n Simple_repeat Simple_repeat 2 103 0 864 230 9 28 chr5 10827376 10827593 -188802557 - MER20 DNA MER1_type -1 218 6 2698 70 26 0 chr5 10827633 10828055 -188802095 + L1PA4 LINE L1 5736 6167 0 180 0 0 0 chr5 10828631 10828651 -188801499 + (A)n Simple_repeat Simple_repeat 1 20 0 925 243 11 21 chr5 10830578 10830862 -188799288 + MER33 DNA MER1_type 44 324 0 3524 227 68 49 chr5 10831410 10832725 -188797425 - L1MC4 LINE L1 -2 8040 6702 2150 151 35 14 chr5 10832938 10833061 -188797089 - L1MA8 LINE L1 0 6291 6172 207 0 0 0 chr5 10833061 10833084 -188797066 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2150 151 35 14 chr5 10833084 10833383 -188796767 - L1MA8 LINE L1 -119 6172 5860 1562 183 3 21 chr5 10835203 10835524 -188794626 + AluJb SINE Alu 1 316 0 1565 177 0 28 chr5 10836735 10837018 -188793132 + AluJb SINE Alu 22 296 -16 2091 132 24 32 chr5 10837230 10837608 -188792542 + THE1C LTR MaLR 1 375 0 564 251 84 6 chr5 10837775 10837948 -188792202 + MIR SINE MIR 64 253 -9 240 59 0 0 chr5 10838719 10838753 -188791397 + (CACCAT)n Simple_repeat Simple_repeat 2 35 0 225 310 141 49 chr5 10838876 10839060 -188791090 - MIR3 SINE MIR -5 203 3 198 303 30 0 chr5 10839221 10839287 -188790863 + MIR SINE MIR 54 121 -87 2094 127 43 0 chr5 10839933 10840232 -188789918 - AluSx SINE Alu 0 312 1 2328 70 0 0 chr5 10840346 10840651 -188789499 - AluY SINE Alu 0 305 1 231 242 21 74 chr5 10841252 10841347 -188788803 - MIR SINE MIR -70 192 103 1841 114 4 15 chr5 10842548 10842821 -188787329 - AluSx SINE Alu -27 285 16 1452 168 27 8 chr5 10842821 10843082 -188787068 + AluSx SINE Alu 41 307 -5 22 35 0 0 chr5 10843168 10843197 -188786953 + AT_rich Low_complexity Low_complexity 1 29 0 223 315 44 66 chr5 10844717 10844779 -188785371 - MER5A DNA MER1_type 0 189 127 2088 112 10 27 chr5 10844779 10845075 -188785075 + AluSq SINE Alu 1 291 -22 223 315 44 66 chr5 10845075 10845191 -188784959 - MER5A DNA MER1_type -62 127 1 634 222 119 0 chr5 10845554 10845730 -188784420 - MER58A DNA MER1_type -27 197 1 244 281 31 0 chr5 10845768 10845832 -188784318 + L2 LINE L2 3234 3299 -14 999 174 46 0 chr5 10846044 10846240 -188783910 + MER2 DNA MER2_type 6 210 -135 2229 47 0 0 chr5 10846432 10846690 -188783460 + AluY SINE Alu 40 297 -14 271 0 51 0 chr5 10846704 10846743 -188783407 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 186 227 239 23 chr5 10846805 10846893 -188783257 - MER5A DNA MER1_type -43 146 40 1310 197 29 65 chr5 10847683 10848068 -188782082 + MER93b LTR ERV1 1 371 -2 225 338 104 19 chr5 10850805 10850959 -188779191 - MIR SINE MIR -19 243 77 196 275 0 0 chr5 10850986 10851026 -188779124 - L2 LINE L2 -18 3295 3256 456 155 10 10 chr5 10851066 10851163 -188778987 - MER53 DNA DNA -92 97 1 785 275 42 21 chr5 10853566 10853806 -188776344 + MIR SINE MIR 8 252 -10 26 50 0 0 chr5 10854105 10854145 -188776005 + AT_rich Low_complexity Low_complexity 1 40 0 259 207 0 35 chr5 10855863 10855921 -188774229 + GA-rich Low_complexity Low_complexity 3 58 0 399 73 0 0 chr5 10857461 10857516 -188772634 + (CA)n Simple_repeat Simple_repeat 1 55 0 280 0 50 0 chr5 10857930 10857970 -188772180 + (TA)n Simple_repeat Simple_repeat 1 42 0 180 216 0 0 chr5 10858364 10858415 -188771735 + A-rich Low_complexity Low_complexity 1 51 0 364 278 295 0 chr5 10859022 10859195 -188770955 - MIR SINE MIR -38 224 1 398 237 45 13 chr5 10862053 10862209 -188767941 + (TA)n Simple_repeat Simple_repeat 2 162 0 1051 249 114 79 chr5 10862209 10862967 -188767183 + LTR1B LTR ERV1 1 983 -37 400 257 9 9 chr5 10863016 10863121 -188767029 + LTR28 LTR ERV1 916 1020 0 314 260 21 21 chr5 10863128 10863224 -188766926 + L1MC4 LINE L1 6614 6709 -1333 22 35 0 0 chr5 10863329 10863358 -188766792 + AT_rich Low_complexity Low_complexity 1 29 0 263 284 71 55 chr5 10865617 10865744 -188764406 - L2 LINE L2 -18 3295 3167 321 254 0 0 chr5 10865817 10865888 -188764262 - MER33 DNA MER1_type 0 363 293 1987 134 0 7 chr5 10865901 10866222 -188763928 + AluSx SINE Alu 1 319 0 289 160 266 11 chr5 10866268 10866362 -188763788 - MER33 DNA MER1_type -205 119 2 2400 227 6 52 chr5 10866620 10867249 -188762901 + MER77 LTR ERV1 6 605 0 27 0 0 0 chr5 10868586 10868613 -188761537 + AT_rich Low_complexity Low_complexity 1 27 0 338 108 15 0 chr5 10868614 10868679 -188761471 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 958 170 0 0 chr5 10868696 10868837 -188761313 - AluJo SINE Alu -171 141 1 1058 195 47 9 chr5 10869014 10869229 -188760921 + MER58A DNA MER1_type 2 224 0 1262 69 17 0 chr5 10869323 10869628 -188760522 + (GGAAA)n Simple_repeat Simple_repeat 1 310 0 413 315 170 16 chr5 10870790 10871251 -188758899 - L2 LINE L2 -28 3285 2752 441 161 136 0 chr5 10871252 10871382 -188758768 - MER58B DNA MER1_type -4 337 181 432 338 118 12 chr5 10871576 10871975 -188758175 - L2 LINE L2 -722 2592 2152 226 324 103 80 chr5 10874545 10874857 -188755293 + L2 LINE L2 2954 3272 0 313 333 54 42 chr5 10875364 10875568 -188754582 + MIR SINE MIR 8 214 -48 2228 97 3 0 chr5 10877218 10877516 -188752634 + AluSq SINE Alu 1 299 -14 1500 194 89 23 chr5 10881423 10881814 -188748336 + MER96B DNA MER1_type 1 417 0 287 293 99 5 chr5 10882045 10882257 -188747893 + MLT1L LTR MaLR 367 598 -17 2396 77 0 0 chr5 10882590 10882888 -188747262 - AluY SINE Alu -13 298 1 260 373 40 17 chr5 10883002 10883179 -188746971 - MIR3 SINE MIR -7 201 21 715 202 50 15 chr5 10883306 10883504 -188746646 - MER3 DNA MER1_type -4 205 1 2132 177 57 7 chr5 10883899 10884305 -188745845 + MSTB LTR MaLR 1 426 0 2101 243 40 29 chr5 10884600 10885325 -188744825 - L1ME1 LINE L1 -4 6162 5430 227 154 218 26 chr5 10885330 10885408 -188744742 - L1ME1 LINE L1 -828 5346 5254 1270 242 49 20 chr5 10885459 10885951 -188744199 - L1ME1 LINE L1 -898 5248 4743 604 305 40 22 chr5 10886074 10886300 -188743850 + L2 LINE L2 3076 3305 -8 25 51 0 0 chr5 10887393 10887432 -188742718 + AT_rich Low_complexity Low_complexity 1 39 0 315 0 0 0 chr5 10890823 10890858 -188739292 + (TG)n Simple_repeat Simple_repeat 1 35 0 1630 233 29 16 chr5 10891402 10891848 -188738302 + MLT1C LTR MaLR 16 467 0 229 186 0 0 chr5 10891909 10891952 -188738198 + MER81 DNA DNA 71 113 -1 187 341 110 0 chr5 10892814 10892896 -188737254 + L2 LINE L2 3173 3263 -9 1051 314 26 30 chr5 10892899 10893466 -188736684 + L1MC4a LINE L1 5398 5962 -1846 338 325 118 19 chr5 10893818 10894030 -188736120 + L1MC4a LINE L1 6414 6646 -1162 1511 232 55 110 chr5 10894058 10895274 -188734876 + L1MC5 LINE L1 6749 7897 -64 197 379 97 0 chr5 10895416 10895519 -188734631 + L2 LINE L2 3160 3272 0 917 260 22 30 chr5 10897552 10898015 -188732135 + MLT1H1 LTR MaLR 4 521 -34 468 0 0 0 chr5 10898143 10898195 -188731955 + (TG)n Simple_repeat Simple_repeat 1 52 0 1703 199 0 13 chr5 10898226 10898533 -188731617 + AluJo SINE Alu 1 303 -9 570 187 187 28 chr5 10900556 10900738 -188729412 - MER20 DNA MER1_type -8 211 1 1378 22 0 22 chr5 10900741 10900925 -188729225 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 180 0 0 0 chr5 10900925 10900945 -188729205 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 200 211 0 0 chr5 10900945 10900983 -188729167 + (CATA)n Simple_repeat Simple_repeat 3 40 0 2364 98 0 16 chr5 10901995 10902302 -188727848 - AluSg SINE Alu -8 302 1 202 279 58 58 chr5 10903154 10903258 -188726892 - MIR3 SINE MIR 0 208 105 207 100 0 0 chr5 10904669 10904699 -188725451 + (A)n Simple_repeat Simple_repeat 1 30 0 2483 80 0 0 chr5 10904820 10905131 -188725019 + AluY SINE Alu 1 311 0 216 286 26 26 chr5 10907091 10907168 -188722982 - MIR SINE MIR -79 183 107 614 315 136 33 chr5 10907535 10908173 -188721977 + L2 LINE L2 2181 2884 -430 286 322 103 21 chr5 10908215 10908457 -188721693 + L2 LINE L2 2888 3149 -164 243 159 0 0 chr5 10908562 10908606 -188721544 + L1MA9 LINE L1 6230 6273 -39 294 284 77 0 chr5 10908639 10908794 -188721356 - HERVL74 LTR ERVL -3751 1934 1768 240 244 98 12 chr5 10908866 10908948 -188721202 + L2 LINE L2 3189 3277 -36 444 254 273 5 chr5 10909644 10909849 -188720301 + MIR SINE MIR 2 261 -1 359 241 68 2 chr5 10909995 10910203 -188719947 + L1ME3A LINE L1 5647 5885 -285 191 309 73 109 chr5 10910437 10910767 -188719383 + L2 LINE L2 2950 3267 -5 28 29 0 0 chr5 10911229 10911264 -188718886 + AT_rich Low_complexity Low_complexity 1 35 0 288 0 0 0 chr5 10912453 10912485 -188717665 + (CA)n Simple_repeat Simple_repeat 1 32 0 1270 257 54 28 chr5 10912589 10913123 -188717027 + MER74B LTR ERVL 69 616 -6 232 281 0 0 chr5 10913380 10913505 -188716645 + (CA)n Simple_repeat Simple_repeat 1 125 0 647 206 217 0 chr5 10913539 10913714 -188716436 + MIR SINE MIR 45 257 -5 2560 175 24 42 chr5 10915276 10915853 -188714297 + L1MB7 LINE L1 5618 6184 0 2954 72 0 5 chr5 10916154 10916543 -188713607 + L1PA8 LINE L1 5784 6170 -2 28 29 0 0 chr5 10916561 10916596 -188713554 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 10916799 10916830 -188713320 + AT_rich Low_complexity Low_complexity 1 31 0 216 316 61 10 chr5 10918320 10918418 -188711732 + MIR SINE MIR 32 134 -128 340 333 23 0 chr5 10919413 10919542 -188710608 + MIR SINE MIR 39 170 -92 2118 120 3 0 chr5 10919913 10920229 -188709921 - AluSx SINE Alu 0 317 1 267 357 25 19 chr5 10921563 10921720 -188708430 + MIR SINE MIR 90 247 -15 559 234 3 6 chr5 10922799 10923154 -188706996 + (CCA)n Simple_repeat Simple_repeat 1 353 0 648 263 122 10 chr5 10923511 10923716 -188706434 - MIR SINE MIR -22 240 13 357 280 19 28 chr5 10923945 10924052 -188706098 - MIR SINE MIR -67 141 36 1990 128 22 10 chr5 10925472 10925784 -188704366 + L1PA8A LINE L1 5816 6131 0 21 0 0 0 chr5 10925916 10925937 -188704213 + AT_rich Low_complexity Low_complexity 1 21 0 2643 20 13 10 chr5 10926595 10926900 -188703250 + AluYa5 SINE Alu 1 306 -5 2056 167 5 32 chr5 10927467 10927838 -188702312 - MER46B DNA MER2_type 0 236 1 489 286 119 5 chr5 10929684 10929880 -188700270 + MIR SINE MIR 37 251 -11 22 0 0 0 chr5 10930873 10930895 -188699255 + AT_rich Low_complexity Low_complexity 1 22 0 937 200 56 37 chr5 10931636 10931851 -188698299 + MER20 DNA MER1_type 1 219 0 1562 201 19 46 chr5 10932695 10932907 -188697243 - MLT1A1 LTR MaLR -6 359 160 2517 57 0 3 chr5 10932907 10933207 -188696943 - AluY SINE Alu -12 299 1 1562 201 19 46 chr5 10933207 10933363 -188696787 - MLT1A1 LTR MaLR -205 160 1 1638 262 16 26 chr5 10933799 10934306 -188695844 - L1 LINE L1 -3004 3142 2641 203 278 0 0 chr5 10935303 10935357 -188694793 - MIR SINE MIR -124 138 85 2094 128 0 13 chr5 10935663 10935968 -188694182 + AluSg SINE Alu 2 302 -8 515 316 76 24 chr5 10936447 10936965 -188693185 - L1ME LINE L1 -502 5664 5116 935 305 63 50 chr5 10939417 10940080 -188690070 + L2 LINE L2 2210 2881 -433 357 254 53 95 chr5 10940118 10940307 -188689843 + L2 LINE L2 3108 3288 -25 443 237 142 24 chr5 10940820 10940989 -188689161 + MIR SINE MIR 63 251 -11 2162 62 44 0 chr5 10941085 10941419 -188688731 + AluY SINE Alu 1 346 0 1956 136 4 0 chr5 10941970 10942249 -188687901 + AluSg SINE Alu 1 280 -30 308 164 15 0 chr5 10942981 10943048 -188687102 + (TA)n Simple_repeat Simple_repeat 1 68 0 423 56 0 0 chr5 10943052 10943106 -188687044 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 24 32 0 0 chr5 10943647 10943678 -188686472 + AT_rich Low_complexity Low_complexity 1 31 0 264 288 81 119 chr5 10943794 10944079 -188686071 - L2 LINE L2 -1 3271 2998 2743 283 73 44 chr5 10944268 10945977 -188684173 - L2 LINE L2 -3 3310 1559 214 206 29 0 chr5 10948485 10948553 -188681597 + CT-rich Low_complexity Low_complexity 1 70 0 26 30 0 0 chr5 10948616 10948649 -188681501 + AT_rich Low_complexity Low_complexity 1 33 0 338 285 173 17 chr5 10949025 10949320 -188680830 + L1ME4a LINE L1 5728 6068 -53 27 29 0 0 chr5 10949345 10949379 -188680771 + AT_rich Low_complexity Low_complexity 1 34 0 942 214 68 10 chr5 10950579 10950785 -188679365 + MER58A DNA MER1_type 7 224 0 589 249 62 8 chr5 10950943 10951130 -188679020 + MIR SINE MIR 42 243 -19 2254 118 16 0 chr5 10952266 10952572 -188677578 - AluSx SINE Alu -1 311 1 1697 238 118 19 chr5 10957011 10957494 -188672656 + MER77 LTR ERV1 54 584 -21 204 234 47 16 chr5 10958248 10958312 -188671838 + GA-rich Low_complexity Low_complexity 1 66 0 483 267 45 11 chr5 10958431 10958607 -188671543 - L1MA9 LINE L1 -30 6282 6101 26 30 0 0 chr5 10959074 10959107 -188671043 + AT_rich Low_complexity Low_complexity 1 33 0 3645 116 0 15 chr5 10959107 10959633 -188670517 - L1PB1 LINE L1 0 6151 5634 2481 62 0 0 chr5 10960309 10960600 -188669550 + AluY SINE Alu 1 291 -20 25 75 0 0 chr5 10961682 10961735 -188668415 + AT_rich Low_complexity Low_complexity 1 53 0 181 242 0 0 chr5 10963317 10963350 -188666800 + MIR SINE MIR 206 238 -24 262 221 23 107 chr5 10963510 10963641 -188666509 - L3 LINE CR1 -689 888 769 4838 97 14 0 chr5 10963885 10964514 -188665636 + L1PA11 LINE L1 5537 6174 0 3344 203 23 5 chr5 10968081 10968701 -188661449 - MER82 DNA MER2_type 0 653 23 236 65 43 0 chr5 10970150 10970196 -188659954 + T-rich Low_complexity Low_complexity 2 180 0 2192 95 0 3 chr5 10970196 10970480 -188659670 - AluY SINE Alu -1 328 1 202 306 35 12 chr5 10972506 10972591 -188657559 + MIR3 SINE MIR 103 189 -19 2631 46 0 0 chr5 10972825 10973131 -188657019 - AluY SINE Alu -5 306 1 1751 233 99 42 chr5 10974121 10974674 -188655476 + MLT1E LTR MaLR 7 591 -2 25 0 0 0 chr5 10974712 10974737 -188655413 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 10974768 10974798 -188655352 + AT_rich Low_complexity Low_complexity 1 30 0 24 85 0 0 chr5 10975377 10975436 -188654714 + AT_rich Low_complexity Low_complexity 1 59 0 5580 114 10 2 chr5 10977094 10977919 -188652231 + L1PA13 LINE L1 5333 6163 0 1119 203 14 27 chr5 10978910 10979132 -188651018 - MER20 DNA MER1_type 0 219 1 23 33 0 0 chr5 10979428 10979458 -188650692 + AT_rich Low_complexity Low_complexity 1 30 0 301 284 97 30 chr5 10979999 10980133 -188650017 + MER5A DNA MER1_type 18 160 -29 282 228 81 87 chr5 10980014 10980163 -188649987 - MER5A DNA MER1_type -24 165 18 * 1087 224 72 36 chr5 10980355 10980686 -188649464 - MER2 DNA MER2_type 0 344 2 1575 39 0 0 chr5 10981125 10981303 -188648847 + L1PA4 LINE L1 5975 6152 -3 2242 105 0 3 chr5 10982041 10982336 -188647814 - AluSg SINE Alu -16 294 1 272 158 129 109 chr5 10982866 10982967 -188647183 - MIR SINE MIR -76 186 84 2209 96 0 0 chr5 10983921 10984231 -188645919 - AluSg SINE Alu 0 310 1 295 304 36 9 chr5 10984440 10984552 -188645598 - MIR SINE MIR -114 148 34 225 294 209 35 chr5 10984795 10984996 -188645154 + MIR SINE MIR 15 250 -12 796 320 33 27 chr5 10985494 10985831 -188644319 + MLT1I LTR MaLR 71 409 0 1042 17 0 0 chr5 10986926 10987042 -188643108 - L1PA4 LINE L1 -6 6149 6034 292 293 97 27 chr5 10987651 10987951 -188642199 - L1ME4a LINE L1 -58 6063 5743 266 91 0 0 chr5 10988002 10988046 -188642104 + L1PA3 LINE L1 6112 6155 0 22 0 0 0 chr5 10988046 10988068 -188642082 + AT_rich Low_complexity Low_complexity 1 22 0 186 189 0 0 chr5 10988513 10988550 -188641600 + GA-rich Low_complexity Low_complexity 3 39 0 1906 125 45 3 chr5 10989866 10990154 -188639996 - AluSx SINE Alu -9 303 4 248 356 20 0 chr5 10990636 10990737 -188639413 + L2 LINE L2 3153 3255 -17 386 174 130 11 chr5 10991289 10991381 -188638769 - L1MC/D LINE L1 -2331 5477 5375 755 185 0 55 chr5 10991726 10991872 -188638278 + AluJo SINE Alu 11 148 -164 1224 208 94 29 chr5 10991873 10992215 -188637935 + THE1C LTR MaLR 3 366 -9 9526 135 40 44 chr5 10992234 10993816 -188636334 + THE1C-int LTR MaLR 3 1579 -1 1714 143 105 46 chr5 10993816 10994167 -188635983 + THE1C LTR MaLR 1 372 -3 873 192 12 35 chr5 10994170 10994342 -188635808 + AluJo SINE Alu 143 310 -2 210 211 307 26 chr5 10994441 10994555 -188635595 + MIR SINE MIR 117 262 0 860 224 29 24 chr5 10994946 10995156 -188634994 - MER20 DNA MER1_type -8 211 1 2233 118 3 10 chr5 10995860 10996173 -188633977 - AluSx SINE Alu -1 311 1 770 263 52 0 chr5 10997483 10997677 -188632473 + MER63A DNA MER1_type 1 204 -6 243 314 11 38 chr5 10998057 10998242 -188631908 + CT-rich Low_complexity Low_complexity 1 180 0 554 178 9 146 chr5 10999849 11000068 -188630082 + MER53 DNA DNA 1 189 0 523 319 103 67 chr5 11000718 11000939 -188629211 + HAL1 LINE L1 885 1097 -1410 3038 115 2 9 chr5 11000939 11001402 -188628748 + L1PA8 LINE L1 5732 6191 0 523 319 103 67 chr5 11001402 11002012 -188628138 + HAL1 LINE L1 1097 1747 -760 704 241 32 27 chr5 11002158 11002378 -188627772 - MIR SINE MIR -11 251 31 24 0 0 0 chr5 11005377 11005401 -188624749 + AT_rich Low_complexity Low_complexity 1 24 0 1559 115 17 0 chr5 11006128 11006362 -188623788 + L1MC1 LINE L1 5947 6184 -149 349 310 76 38 chr5 11006970 11007154 -188622996 - L2 LINE L2 0 3313 3123 274 309 21 0 chr5 11007215 11007312 -188622838 - MIR SINE MIR -108 154 56 3371 152 9 0 chr5 11007589 11008122 -188622028 + L1MC1 LINE L1 5788 6325 -8 378 238 24 0 chr5 11008129 11008255 -188621895 + (TA)n Simple_repeat Simple_repeat 1 129 0 27 29 0 0 chr5 11008394 11008428 -188621722 + AT_rich Low_complexity Low_complexity 1 34 0 31 0 0 0 chr5 11008930 11008961 -188621189 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 11009090 11009111 -188621039 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 11009904 11009925 -188620225 + AT_rich Low_complexity Low_complexity 1 21 0 305 243 87 0 chr5 11010420 11010523 -188619627 - L2 LINE L2 -6 3307 3196 426 231 110 99 chr5 11010774 11010956 -188619194 + L2 LINE L2 3108 3291 -22 2095 118 3 7 chr5 11010985 11011272 -188618878 - AluSx SINE Alu -26 286 1 672 222 60 0 chr5 11012510 11012677 -188617473 - MIR SINE MIR -22 240 64 660 247 60 47 chr5 11012966 11013201 -188616949 + MER74A LTR ERVL 11 248 -310 183 275 43 29 chr5 11014411 11014480 -188615670 + L2 LINE L2 3160 3229 -84 521 209 0 0 chr5 11015538 11015648 -188614502 - MER53 DNA DNA -9 180 71 204 211 0 0 chr5 11016299 11016337 -188613813 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr5 11017029 11017052 -188613098 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 11018542 11018563 -188611587 + AT_rich Low_complexity Low_complexity 1 21 0 2409 85 7 0 chr5 11018861 11019166 -188610984 + AluSg SINE Alu 1 307 -3 244 379 107 22 chr5 11019301 11019665 -188610485 - L2 LINE L2 0 3313 2919 21 0 0 0 chr5 11020266 11020287 -188609863 + AT_rich Low_complexity Low_complexity 1 21 0 2540 71 0 0 chr5 11022650 11022960 -188607190 + AluY SINE Alu 1 310 -1 227 287 77 107 chr5 11023499 11023799 -188606351 + L2 LINE L2 2933 3223 -49 2341 84 0 0 chr5 11024189 11024504 -188605646 - AluSq SINE Alu 0 315 1 459 308 137 12 chr5 11024719 11025047 -188605103 - L2 LINE L2 0 3313 2945 209 387 0 0 chr5 11025155 11025230 -188604920 - L2 LINE L2 0 3313 3239 229 224 45 15 chr5 11025266 11025333 -188604817 + MER116 DNA Mariner 6 74 -6 981 143 65 32 chr5 11026551 11026767 -188603383 + L1MA8 LINE L1 6068 6290 -1 266 359 36 36 chr5 11027249 11027444 -188602706 - MIR SINE MIR -48 214 20 252 0 0 0 chr5 11027984 11028012 -188602138 + (TA)n Simple_repeat Simple_repeat 2 29 0 2081 193 19 61 chr5 11028806 11029329 -188600821 - MLT1D LTR MaLR -4 501 1 2090 161 24 0 chr5 11029370 11029706 -188600444 + MER2 DNA MER2_type 1 344 0 1767 197 33 0 chr5 11029964 11030294 -188599856 - MER47B DNA MER2_type -76 342 2 261 235 286 25 chr5 11030992 11031111 -188599039 - L2 LINE L2 0 3272 3123 260 172 46 0 chr5 11031146 11031233 -188598917 + (CA)n Simple_repeat Simple_repeat 1 91 0 603 204 65 117 chr5 11032731 11032962 -188597188 + MER20 DNA MER1_type 1 219 0 267 357 25 19 chr5 11034209 11034366 -188595784 - MIR SINE MIR -15 247 90 2013 121 7 7 chr5 11035696 11035985 -188594165 + AluSx SINE Alu 1 289 -23 340 333 23 0 chr5 11036388 11036517 -188593633 - MIR SINE MIR -92 170 39 206 316 61 10 chr5 11037451 11037549 -188592601 - MIR SINE MIR -128 134 32 24 32 0 0 chr5 11039039 11039070 -188591080 + AT_rich Low_complexity Low_complexity 1 31 0 2041 79 4 8 chr5 11039166 11039433 -188590717 + AluYa5 SINE Alu 38 303 -8 515 316 76 24 chr5 11039912 11040430 -188589720 - L1ME LINE L1 -502 5664 5116 935 305 63 50 chr5 11042881 11043544 -188586606 + L2 LINE L2 2210 2881 -433 357 254 53 95 chr5 11043582 11043771 -188586379 + L2 LINE L2 3108 3288 -25 443 237 142 24 chr5 11044284 11044453 -188585697 + MIR SINE MIR 63 251 -11 2162 62 44 0 chr5 11044549 11044883 -188585267 + AluY SINE Alu 1 346 0 1956 136 4 0 chr5 11045435 11045714 -188584436 + AluSg SINE Alu 1 280 -30 299 167 15 0 chr5 11046446 11046512 -188583638 + (TA)n Simple_repeat Simple_repeat 2 68 0 423 56 0 0 chr5 11046517 11046571 -188583579 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 24 32 0 0 chr5 11047113 11047144 -188583006 + AT_rich Low_complexity Low_complexity 1 31 0 264 288 81 119 chr5 11047260 11047545 -188582605 - L2 LINE L2 -1 3271 2998 2223 283 64 35 chr5 11047734 11049105 -188581045 - L2 LINE L2 -3 3310 1907 470 215 54 0 chr5 11049906 11049999 -188580151 + MER5A DNA MER1_type 7 104 -85 21 0 0 0 chr5 11050130 11050151 -188579999 + AT_rich Low_complexity Low_complexity 1 21 0 365 303 76 0 chr5 11052726 11052871 -188577279 - L2 LINE L2 -2 3311 3156 2215 226 29 6 chr5 11053138 11053659 -188576491 + L1MC3 LINE L1 7234 7766 -19 2225 123 0 0 chr5 11053666 11053975 -188576175 + AluSx SINE Alu 1 309 -3 2117 112 20 3 chr5 11054842 11055138 -188575012 + AluSq SINE Alu 5 305 -8 1364 225 61 48 chr5 11056376 11056490 -188573660 + MLT1C LTR MaLR 4 115 -352 1958 145 148 19 chr5 11056490 11056869 -188573281 + MSTA LTR MaLR 1 428 0 1364 225 61 48 chr5 11056869 11057212 -188572938 + MLT1C LTR MaLR 115 467 0 429 145 0 0 chr5 11057560 11057629 -188572521 + MER116 DNA Mariner 6 74 -6 1071 246 18 0 chr5 11057632 11057852 -188572298 + MER58A DNA MER1_type 1 224 0 314 128 21 0 chr5 11058134 11058181 -188571969 + MLT1C LTR MaLR 343 390 -77 241 281 91 18 chr5 11059524 11059860 -188570290 - LTR33 LTR ERVL -9 512 83 698 256 81 20 chr5 11060206 11060452 -188569698 - MIR SINE MIR 0 262 2 385 268 75 10 chr5 11060957 11061167 -188568983 + MLT1H1 LTR MaLR 2 181 -374 418 271 133 18 chr5 11061204 11061370 -188568780 + MLT1H1 LTR MaLR 371 555 0 22 35 0 0 chr5 11062076 11062105 -188568045 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr5 11063027 11063064 -188567086 + AT_rich Low_complexity Low_complexity 1 37 0 207 185 0 108 chr5 11063345 11063410 -188566740 + MER5B DNA MER1_type 12 69 -109 205 400 9 0 chr5 11064265 11064375 -188565775 + L2 LINE L2 3145 3255 -17 188 402 51 8 chr5 11064486 11064603 -188565547 + L3b LINE CR1 1455 1576 -7 2224 85 0 69 chr5 11064835 11065153 -188564997 - AluSx SINE Alu -16 296 1 995 82 48 0 chr5 11067142 11067288 -188562862 - MER41A LTR ERV1 0 554 402 2301 116 0 0 chr5 11068895 11069197 -188560953 + AluSx SINE Alu 1 302 -10 1833 202 26 19 chr5 11071506 11071927 -188558223 - L1MB8 LINE L1 -1 6177 5754 656 122 2 2 chr5 11072162 11072269 -188557881 - Tigger4(Zombi) DNA MER2_type 0 2731 2625 475 204 0 0 chr5 11072258 11072346 -188557804 - Tigger4(Zombi) DNA MER2_type -2643 88 1 * 351 233 38 60 chr5 11072688 11072821 -188557329 - L2 LINE L2 0 3313 3184 2204 95 3 29 chr5 11072873 11073188 -188556962 + AluY SINE Alu 1 307 -4 180 0 0 0 chr5 11073415 11073435 -188556715 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 336 285 86 106 chr5 11077737 11078084 -188552066 + L1M2 LINE L1 897 1235 -5614 216 0 0 0 chr5 11078084 11078108 -188552042 + (CGCGG)n Simple_repeat Simple_repeat 1 24 0 336 285 86 106 chr5 11078108 11078202 -188551948 + L1M2 LINE L1 1235 1329 -5520 180 0 0 0 chr5 11078883 11078903 -188551247 + (TCC)n Simple_repeat Simple_repeat 1 20 0 198 320 0 0 chr5 11081090 11081140 -188549010 + MIR SINE MIR 87 136 -72 611 275 58 116 chr5 11083819 11084006 -188546144 + MLT1J LTR MaLR 119 270 -241 2202 123 0 0 chr5 11084006 11084307 -188545843 + AluSx SINE Alu 1 301 -11 611 275 58 116 chr5 11084307 11084533 -188545617 + MLT1J LTR MaLR 270 508 -3 288 368 56 52 chr5 11084675 11084944 -188545206 - L2 LINE L2 -35 3237 2968 1651 165 18 107 chr5 11085070 11085471 -188544679 - MLT1A1 LTR MaLR 0 365 1 8304 198 57 31 chr5 11085471 11087163 -188542987 - MLT1A1-int LTR MaLR 0 1735 1 714 203 8 8 chr5 11087163 11087296 -188542854 - MLT1A1 LTR MaLR 0 365 233 394 266 90 34 chr5 11087377 11087610 -188542540 + L1ME LINE L1 3816 4061 -2085 386 289 100 54 chr5 11087845 11088946 -188541204 + L1ME LINE L1 4442 5617 -547 841 368 124 7 chr5 11089289 11090104 -188540046 - L2 LINE L2 -1481 1833 924 356 296 29 52 chr5 11090518 11090690 -188539460 + MER5B DNA MER1_type 22 178 0 668 310 21 8 chr5 11091626 11091868 -188538282 - MIR SINE MIR -3 259 15 554 157 90 2 chr5 11091893 11092065 -188538085 - MER58A DNA MER1_type -3 221 1 882 214 27 16 chr5 11092073 11092260 -188537890 - MER5A DNA MER1_type 0 189 1 25 0 0 0 chr5 11093096 11093121 -188537029 + AT_rich Low_complexity Low_complexity 1 25 0 497 278 32 27 chr5 11093411 11093598 -188536552 - MIR3 SINE MIR -13 195 8 396 0 0 0 chr5 11093667 11093711 -188536439 + (TG)n Simple_repeat Simple_repeat 2 45 0 624 62 0 0 chr5 11093719 11093800 -188536350 + (GGAGAA)n Simple_repeat Simple_repeat 1 81 0 509 279 191 38 chr5 11093811 11094151 -188535999 - MLT1J LTR MaLR -113 398 7 2007 129 57 48 chr5 11094559 11094931 -188535219 - THE1C LTR MaLR 0 375 1 293 308 97 44 chr5 11095925 11096152 -188533998 - MLT1J LTR MaLR -130 381 143 391 283 167 24 chr5 11096603 11096896 -188533254 - L1MEd LINE L1 -5150 969 635 475 231 106 60 chr5 11097153 11097435 -188532715 - L1MEd LINE L1 -5794 325 31 1388 189 79 4 chr5 11097962 11098227 -188531923 - AluJb SINE Alu -19 293 9 3112 74 13 2 chr5 11098702 11099095 -188531055 + L1PA13 LINE L1 5767 6163 0 453 293 135 83 chr5 11099097 11099352 -188530798 + L1ME4a LINE L1 5310 5551 -570 2366 61 0 0 chr5 11099352 11099677 -188530473 + AluY SINE Alu 1 325 0 453 293 135 83 chr5 11099677 11100007 -188530143 + L1ME4a LINE L1 5551 5926 -195 1521 174 30 0 chr5 11100047 11100312 -188529838 + MER2 DNA MER2_type 1 273 -72 198 333 20 0 chr5 11100507 11100558 -188529592 - MER5A DNA MER1_type -65 124 73 23 0 0 0 chr5 11101280 11101303 -188528847 + AT_rich Low_complexity Low_complexity 1 23 0 797 295 172 12 chr5 11101619 11102043 -188528107 - L2 LINE L2 -1012 2302 1811 25 0 0 0 chr5 11102047 11102072 -188528078 + AT_rich Low_complexity Low_complexity 1 25 0 407 221 110 8 chr5 11102107 11102234 -188527916 - Zaphod DNA AcHobo -10 4021 3882 509 212 0 0 chr5 11102237 11102336 -188527814 + L1MD2 LINE L1 6240 6338 -21 267 247 27 27 chr5 11102383 11102456 -188527694 - MER115 DNA AcHobo -144 549 477 717 255 13 0 chr5 11102464 11102621 -188527529 - MER45A DNA AcHobo -1 177 19 444 195 234 8 chr5 11102645 11102773 -188527377 - LTR52 LTR ERVL -264 157 1 562 279 113 26 chr5 11102781 11103046 -188527104 + L2 LINE L2 3005 3292 -21 424 224 129 99 chr5 11105014 11105092 -188525058 + MLT1I LTR MaLR 107 181 -228 1334 167 139 0 chr5 11105092 11105350 -188524800 + AluJb SINE Alu 1 294 -18 424 224 129 99 chr5 11105350 11105543 -188524607 + MLT1I LTR MaLR 181 386 -23 1741 184 10 0 chr5 11105686 11105985 -188524165 + AluJo SINE Alu 1 302 -10 21 71 0 0 chr5 11107024 11107066 -188523084 + AT_rich Low_complexity Low_complexity 1 42 0 635 290 43 90 chr5 11107135 11107631 -188522519 - MLT1J2 LTR MaLR -8 442 1 198 250 21 0 chr5 11108020 11108068 -188522082 - L2 LINE L2 0 3313 3265 1789 203 109 106 chr5 11108543 11109348 -188520802 + Charlie2 DNA MER1_type 1874 2684 -178 8080 29 5 0 chr5 11109348 11110497 -188519653 + L1PA4 LINE L1 5000 6152 -3 1789 203 109 106 chr5 11110497 11110644 -188519506 + Charlie2 DNA MER1_type 2684 2829 -33 244 203 0 127 chr5 11110784 11110832 -188519318 - MER46C DNA MER2_type -66 272 236 1253 247 108 44 chr5 11110832 11111350 -188518800 + MLT1H1 LTR MaLR 1 551 -4 244 203 0 127 chr5 11111350 11111380 -188518770 - MER46C DNA MER2_type -102 236 204 471 224 22 48 chr5 11111672 11111817 -188518333 - MIR SINE MIR -36 172 31 3218 110 0 5 chr5 11112069 11112155 -188517995 + L1PB1 LINE L1 5708 5793 -358 333 0 0 0 chr5 11112155 11112192 -188517958 + (CA)n Simple_repeat Simple_repeat 2 38 0 3218 110 0 5 chr5 11112192 11112549 -188517601 + L1PB1 LINE L1 5793 6149 -2 578 127 0 32 chr5 11112608 11112734 -188517416 + (TA)n Simple_repeat Simple_repeat 1 122 0 891 193 37 6 chr5 11113767 11113928 -188516222 + FRAM SINE Alu 1 160 -16 2335 79 0 0 chr5 11113931 11114241 -188515909 + AluSc SINE Alu 1 310 0 1061 289 73 35 chr5 11115449 11115941 -188514209 - MLT1J LTR MaLR 0 511 1 247 293 49 12 chr5 11116593 11116675 -188513475 + MIR SINE MIR 33 117 -91 20531 25 0 0 chr5 11116861 11119903 -188510247 - L1PA3 LINE L1 -3 6152 3100 586 267 85 6 chr5 11120567 11120743 -188509407 + MIR SINE MIR 18 207 -55 2011 135 3 3 chr5 11121353 11121650 -188508500 + AluSq SINE Alu 2 298 -15 1814 157 17 0 chr5 11122887 11123048 -188507102 - AluJb SINE Alu -17 295 125 2220 101 3 3 chr5 11123048 11123344 -188506806 - AluSc SINE Alu -13 296 1 1814 157 17 0 chr5 11123344 11123469 -188506681 - AluJb SINE Alu -187 125 4 22 0 0 0 chr5 11123475 11123497 -188506653 + AT_rich Low_complexity Low_complexity 1 22 0 1715 241 165 44 chr5 11123693 11124334 -188505816 + L1ME3A LINE L1 4742 5304 -866 5344 78 0 0 chr5 11124334 11124997 -188505153 + L1PA8 LINE L1 5503 6165 -7 1715 241 165 44 chr5 11124997 11125624 -188504526 + L1ME3A LINE L1 5304 6165 -5 275 227 53 0 chr5 11126499 11126574 -188503576 - 7SK RNA RNA -100 93 15 485 92 41 0 chr5 11126579 11126677 -188503473 + (TA)n Simple_repeat Simple_repeat 1 102 0 2896 138 20 35 chr5 11126681 11126700 -188503450 - MER31A LTR ERV1 0 485 467 1453 165 12 92 chr5 11126700 11127028 -188503122 + AluJo SINE Alu 1 302 -10 2896 138 20 35 chr5 11127028 11127500 -188502650 - MER31A LTR ERV1 -18 467 1 238 246 15 0 chr5 11128761 11128826 -188501324 - L1MB4 LINE L1 0 6180 6115 253 286 0 0 chr5 11129607 11129684 -188500466 + L2 LINE L2 3235 3311 -2 330 293 14 21 chr5 11129862 11130002 -188500148 + CT-rich Low_complexity Low_complexity 3 141 0 1258 144 0 33 chr5 11130448 11130663 -188499487 - L1MA9 LINE L1 -5 6307 6100 24 53 0 0 chr5 11131113 11131151 -188498999 + AT_rich Low_complexity Low_complexity 1 38 0 299 180 66 0 chr5 11131453 11131514 -188498636 - L1MA9 LINE L1 -5 6307 6243 1156 199 5 23 chr5 11133078 11133299 -188496851 + MER58A DNA MER1_type 6 222 -2 2233 203 65 15 chr5 11133569 11134047 -188496103 - MLT1D LTR MaLR -3 502 1 342 0 0 0 chr5 11134574 11134612 -188495538 + (A)n Simple_repeat Simple_repeat 1 38 0 1956 158 78 45 chr5 11134623 11134778 -188495372 + MLT1B LTR MaLR 1 150 -240 2243 115 3 0 chr5 11134778 11135083 -188495067 + AluSx SINE Alu 5 310 -2 1956 158 78 45 chr5 11135083 11135301 -188494849 + MLT1B LTR MaLR 150 386 -4 375 188 83 21 chr5 11135346 11135442 -188494708 - LTR16A1 LTR ERVL -351 106 5 305 266 164 83 chr5 11137222 11137382 -188492768 - L2 LINE L2 -197 3116 2970 2512 195 74 55 chr5 11137382 11137925 -188492225 + MLT2B3 LTR ERVL 2 554 0 305 266 164 83 chr5 11137925 11138155 -188491995 - L2 LINE L2 -343 2970 2694 212 289 134 35 chr5 11138476 11138618 -188491532 + MIR3 SINE MIR 30 185 -23 2282 112 0 0 chr5 11138815 11139110 -188491040 + AluSx SINE Alu 1 295 -17 428 279 38 25 chr5 11139367 11139525 -188490625 + LTR67 LTR ERVL 29 188 -369 557 280 116 57 chr5 11139915 11140493 -188489657 - L1MC4a LINE L1 -1904 5904 5293 23 33 0 0 chr5 11140676 11140706 -188489444 + AT_rich Low_complexity Low_complexity 1 30 0 571 294 82 77 chr5 11140876 11141670 -188488480 + L1M4 LINE L1 4027 4824 -1322 600 263 53 13 chr5 11142110 11142262 -188487888 - MER5A DNA MER1_type 0 189 32 504 32 0 0 chr5 11142326 11142388 -188487762 + (CA)n Simple_repeat Simple_repeat 1 62 0 6684 205 25 100 chr5 11142599 11144648 -188485502 + L1M4 LINE L1 5 1934 -4712 1916 139 17 46 chr5 11144684 11145029 -188485121 + THE1B LTR MaLR 30 364 0 1836 154 4 4 chr5 11145029 11145309 -188484841 + AluJb SINE Alu 14 293 -19 586 274 95 21 chr5 11145314 11145841 -188484309 + L1M4 LINE L1 1926 2577 -4069 1510 180 92 30 chr5 11146661 11147061 -188483089 + MER69 DNA AcHobo 2089 2513 -13 1540 53 5 0 chr5 11147293 11147483 -188482667 - AluY SINE Alu -5 306 116 910 286 84 23 chr5 11147624 11148120 -188482030 - L2 LINE L2 -60 3253 2723 326 296 74 81 chr5 11148484 11149163 -188480987 - L1ME4a LINE L1 -43 6078 5405 2260 103 3 7 chr5 11149317 11149619 -188480531 - AluSg SINE Alu -9 301 1 993 123 54 74 chr5 11150943 11151146 -188479004 + MER20 DNA MER1_type 16 214 -5 185 300 33 0 chr5 11151853 11151913 -188478237 - MIR SINE MIR -73 189 128 240 231 77 87 chr5 11151943 11152047 -188478103 + MIR SINE MIR 94 196 -66 343 349 113 14 chr5 11152240 11152452 -188477698 + MIR SINE MIR 21 253 -9 502 295 136 30 chr5 11152877 11153216 -188476934 + L1ME LINE L1 5417 5791 -330 2432 97 0 0 chr5 11153537 11153845 -188476305 + AluSq SINE Alu 2 309 -4 498 149 0 0 chr5 11154729 11154816 -188475334 + (A)n Simple_repeat Simple_repeat 1 87 0 246 32 0 0 chr5 11154898 11154929 -188475221 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2686 185 92 7 chr5 11155297 11155882 -188474268 - L1MB4 LINE L1 -5 6175 5541 211 296 217 35 chr5 11156441 11156628 -188473522 - MIR3 SINE MIR -35 227 12 286 200 0 0 chr5 11156762 11156817 -188473333 - MIR SINE MIR -95 167 113 2327 100 0 3 chr5 11157717 11158017 -188472133 + AluSx SINE Alu 1 299 -13 249 260 0 27 chr5 11158646 11158719 -188471431 + 7SK RNA RNA 3 73 -120 369 62 0 0 chr5 11159085 11159133 -188471017 + (TA)n Simple_repeat Simple_repeat 1 48 0 1933 156 3 10 chr5 11159134 11159429 -188470721 - AluSx SINE Alu -19 293 1 447 19 0 0 chr5 11160857 11160909 -188469241 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 892 182 18 0 chr5 11161496 11161666 -188468484 - L1MD2 LINE L1 0 6359 6187 22 35 0 0 chr5 11162770 11162799 -188467351 + AT_rich Low_complexity Low_complexity 1 29 0 705 186 81 59 chr5 11163679 11163872 -188466278 - MER20 DNA MER1_type -2 217 19 1475 243 0 7 chr5 11163985 11164273 -188465877 - AluJo SINE Alu -26 286 1 6969 139 18 22 chr5 11164820 11165967 -188464183 - Tigger1 DNA MER2_type 0 2418 1276 16563 166 36 8 chr5 11165972 11165998 -188464152 - L1P5 LINE L1 -333 6534 6510 216 0 0 0 chr5 11165998 11166022 -188464128 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 239 0 32 0 chr5 11166021 11166052 -188464098 + (TA)n Simple_repeat Simple_repeat 1 32 0 16563 166 36 8 chr5 11166022 11172360 -188457790 - L1P5 LINE L1 -357 6510 23 5322 145 44 35 chr5 11172367 11173313 -188456837 - Tigger1 DNA MER2_type -1463 955 1 494 207 21 7 chr5 11175654 11175799 -188454351 + CT-rich Low_complexity Low_complexity 1 147 0 378 266 319 35 chr5 11175806 11175865 -188454285 - L2 LINE L2 -11 3302 3261 3433 155 15 20 chr5 11175865 11176470 -188453680 - MER7C DNA MER2_type 0 602 1 378 266 319 35 chr5 11176470 11176692 -188453458 - L2 LINE L2 -52 3261 2941 1216 279 63 64 chr5 11176834 11177440 -188452710 - L2 LINE L2 -540 2774 2170 328 314 59 46 chr5 11177564 11177870 -188452280 - L1M4 LINE L1 -2314 3832 3523 396 329 121 22 chr5 11177892 11178123 -188452027 - MIR SINE MIR 0 262 9 425 336 60 20 chr5 11178192 11178442 -188451708 + MLT1K LTR MaLR 3 262 -326 310 276 65 65 chr5 11178487 11178701 -188451449 + MLT1K LTR MaLR 346 559 -29 186 350 0 30 chr5 11179876 11179976 -188450174 - MIR3 SINE MIR -5 203 107 28 71 0 0 chr5 11180999 11181055 -188449095 + AT_rich Low_complexity Low_complexity 1 56 0 26 0 0 0 chr5 11182778 11182804 -188447346 + AT_rich Low_complexity Low_complexity 1 26 0 494 272 166 34 chr5 11183392 11183657 -188446493 + L2 LINE L2 3014 3313 0 856 276 83 21 chr5 11185038 11185422 -188444728 + MLT1J2 LTR MaLR 41 448 -2 1673 191 14 11 chr5 11185598 11185965 -188444185 - L1MB3 LINE L1 -3 6180 5813 252 143 0 0 chr5 11185965 11186007 -188444143 - L1M3 LINE L1 -329 5854 5813 268 119 0 0 chr5 11186007 11186049 -188444101 - L1M3 LINE L1 -329 5854 5813 1946 176 8 8 chr5 11186049 11186424 -188443726 - L1MB3 LINE L1 -329 5854 5480 22 0 0 0 chr5 11186995 11187017 -188443133 + AT_rich Low_complexity Low_complexity 1 22 0 828 257 13 29 chr5 11187488 11188000 -188442150 + L1ME2 LINE L1 5493 6102 -62 333 257 0 73 chr5 11188201 11188310 -188441840 + L1ME4a LINE L1 5264 5364 -2444 398 297 57 31 chr5 11188364 11188556 -188441594 + L1ME4a LINE L1 5257 5453 -2355 223 186 0 0 chr5 11188584 11188627 -188441523 + T-rich Low_complexity Low_complexity 1 43 0 356 176 14 54 chr5 11188849 11188923 -188441227 + L2 LINE L2 3236 3306 -7 1126 216 53 104 chr5 11189055 11189486 -188440664 - MLT2B1 LTR ERVL 0 414 6 297 321 0 0 chr5 11189491 11189597 -188440553 + L1ME4a LINE L1 5568 5673 -448 387 280 95 43 chr5 11189658 11189962 -188440188 + L1ME4a LINE L1 5761 6080 -41 1799 171 53 8 chr5 11190274 11190648 -188439502 + L1MB2 LINE L1 5777 6167 -4 884 259 21 13 chr5 11190877 11191113 -188439037 - MIR SINE MIR 0 262 25 421 293 140 6 chr5 11191132 11191289 -188438861 - MER5A DNA MER1_type -3 186 9 22 35 0 0 chr5 11192733 11192762 -188437388 + AT_rich Low_complexity Low_complexity 1 29 0 2448 53 0 47 chr5 11192786 11193106 -188437044 - AluY SINE Alu -6 305 1 1347 247 130 61 chr5 11193321 11193889 -188436261 + MLT1E2 LTR MaLR 1 624 0 309 191 40 91 chr5 11194550 11194727 -188435423 - MLT1H LTR MaLR 0 525 325 474 277 61 19 chr5 11194795 11195008 -188435142 - MLT1H LTR MaLR -325 224 3 405 342 53 30 chr5 11195016 11195317 -188434833 - MLT1I LTR MaLR -65 344 37 21 82 0 0 chr5 11196058 11196107 -188434043 + AT_rich Low_complexity Low_complexity 1 49 0 1384 213 62 37 chr5 11196438 11196842 -188433308 + MLT1C LTR MaLR 41 461 -6 248 227 297 16 chr5 11197544 11197672 -188432478 - MIR SINE MIR -11 251 88 785 221 147 78 chr5 11197675 11198207 -188431943 - MLT1E3 LTR MaLR 0 624 1 446 254 16 32 chr5 11198386 11198512 -188431638 + MIR SINE MIR 118 241 -21 382 308 87 36 chr5 11199421 11199755 -188430395 + L1MC3 LINE L1 2173 2523 -3873 206 326 35 23 chr5 11199820 11199906 -188430244 - L2 LINE L2 -9 3263 3177 16208 201 20 11 chr5 11200418 11202969 -188427181 + L1PA15 LINE L1 1532 4059 -2757 2227 158 44 0 chr5 11202969 11203355 -188426795 + MER57A LTR ERV1 1 403 0 16208 201 20 11 chr5 11203355 11206043 -188424107 + L1PA15 LINE L1 4059 6813 -3 32 95 0 0 chr5 11206258 11206353 -188423797 + AT_rich Low_complexity Low_complexity 1 95 0 468 327 36 6 chr5 11207186 11207354 -188422796 + MIR SINE MIR 33 205 -57 825 237 93 13 chr5 11207523 11207823 -188422327 + L1MC3 LINE L1 4143 4466 -1749 212 59 29 0 chr5 11207836 11207870 -188422280 + (TA)n Simple_repeat Simple_repeat 1 35 0 740 218 16 0 chr5 11207882 11208070 -188422080 + L1MC3 LINE L1 4534 4724 -1491 * 2502 194 14 42 chr5 11208068 11208138 -188422012 - L1 LINE L1 -1807 4339 4269 2417 108 0 0 chr5 11208138 11208445 -188421705 - AluSc SINE Alu -2 307 1 2502 194 14 42 chr5 11208445 11208997 -188421153 - L1 LINE L1 -1877 4269 3734 8770 197 37 67 chr5 11209001 11209526 -188420624 + L1MC3 LINE L1 4713 5252 -2812 4340 95 5 5 chr5 11209526 11210155 -188419995 + L1PA13 LINE L1 5532 6160 -3 8770 197 37 67 chr5 11210155 11210634 -188419516 + L1MC3 LINE L1 5252 5744 -2320 561 220 0 9 chr5 11210634 11210743 -188419407 + AluJo SINE Alu 120 227 -85 6391 94 10 4 chr5 11210744 11211687 -188418463 + L1PA10 LINE L1 5221 6168 0 8770 197 37 67 chr5 11211687 11213502 -188416648 + L1MC3 LINE L1 5744 7750 -314 1934 123 3 34 chr5 11213502 11213795 -188416355 + AluSx SINE Alu 1 284 -28 8770 197 37 67 chr5 11213795 11214100 -188416050 + L1MC3 LINE L1 7750 8063 -1 198 0 0 0 chr5 11214263 11214285 -188415865 + (A)n Simple_repeat Simple_repeat 1 22 0 434 255 176 7 chr5 11214491 11214644 -188415506 + MER5A DNA MER1_type 4 182 -7 183 319 159 35 chr5 11214694 11214807 -188415343 + L2 LINE L2 3109 3235 -37 27 29 0 0 chr5 11215913 11215947 -188414203 + AT_rich Low_complexity Low_complexity 1 34 0 513 253 77 22 chr5 11216306 11216488 -188413662 - MER117 DNA MER1_type -3 194 3 3537 144 30 16 chr5 11216764 11217253 -188412897 + L1MA5 LINE L1 5625 6127 -173 847 200 42 0 chr5 11217253 11217418 -188412732 - FAM SINE Alu -3 172 1 3537 144 30 16 chr5 11217418 11217595 -188412555 + L1MA5 LINE L1 6127 6300 0 27 108 0 0 chr5 11218131 11218242 -188411908 + AT_rich Low_complexity Low_complexity 1 111 0 2106 147 3 0 chr5 11218592 11218899 -188411251 - AluSq SINE Alu -5 308 1 308 250 18 27 chr5 11219287 11219399 -188410751 + GA-rich Low_complexity Low_complexity 2 112 0 416 293 159 21 chr5 11219410 11219700 -188410450 + L1ME4a LINE L1 5742 6071 -50 2196 81 7 24 chr5 11219709 11220004 -188410146 - AluSp SINE Alu -23 290 1 2085 194 52 47 chr5 11220161 11220780 -188409370 + LTR29 LTR ERV1 1 622 0 196 154 39 0 chr5 11221903 11221955 -188408195 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 1647 233 113 53 chr5 11221997 11222041 -188408109 - Charlie2a DNA MER1_type -177 2685 2645 705 240 88 0 chr5 11222041 11222212 -188407938 + MER5A DNA MER1_type 1 186 -3 1647 233 113 53 chr5 11222212 11222996 -188407154 - Charlie2a DNA MER1_type -217 2645 1807 401 229 95 56 chr5 11223196 11223375 -188406775 - Charlie2a DNA MER1_type -1181 1681 1496 276 269 47 41 chr5 11223536 11223707 -188406443 - Charlie2a DNA MER1_type -2278 584 413 1229 221 174 43 chr5 11223754 11224192 -188405958 + MLT1D LTR MaLR 1 495 -10 2035 121 3 50 chr5 11225961 11226283 -188403867 + AluSp SINE Alu 1 307 -6 213 310 113 21 chr5 11227716 11227858 -188402292 + MIR SINE MIR 17 171 -91 2188 115 0 7 chr5 11229020 11229316 -188400834 + AluSx SINE Alu 9 302 -10 234 227 45 11 chr5 11229327 11229415 -188400735 + L1MC/D LINE L1 2938 3028 -3118 2249 113 3 0 chr5 11229466 11229775 -188400375 + AluSp SINE Alu 1 310 -3 204 200 0 0 chr5 11229798 11229843 -188400307 + GA-rich Low_complexity Low_complexity 3 47 0 264 307 27 20 chr5 11230883 11231033 -188399117 + L1MC/D LINE L1 4497 4647 -1499 236 279 19 67 chr5 11232667 11232771 -188397379 - L3b LINE CR1 -92 1491 1393 2204 157 8 38 chr5 11233335 11233730 -188396420 - MLT1B LTR MaLR -7 383 1 387 41 0 0 chr5 11233939 11233988 -188396162 + (CA)n Simple_repeat Simple_repeat 2 50 0 955 169 47 42 chr5 11234993 11235206 -188394944 + MER20 DNA MER1_type 1 214 -5 464 240 72 8 chr5 11235259 11235384 -188394766 + MLT1H LTR MaLR 417 549 0 1013 294 59 25 chr5 11237307 11237745 -188392405 + L1MC/D LINE L1 5315 5767 -2041 1944 134 0 11 chr5 11238288 11238572 -188391578 + AluSq SINE Alu 1 281 -32 1662 105 0 0 chr5 11240177 11240423 -188389727 + AluSg/x SINE Alu 65 310 0 569 263 105 70 chr5 11241531 11241753 -188388397 - MLT1L LTR MaLR -112 503 267 1346 73 0 0 chr5 11241753 11241917 -188388233 + L1PA8 LINE L1 6009 6172 0 569 263 105 70 chr5 11241917 11241979 -188388171 - MLT1L LTR MaLR -348 267 209 2124 218 121 0 chr5 11242151 11242632 -188387518 + MLT1F LTR MaLR 4 542 0 287 294 220 0 chr5 11242716 11242893 -188387257 + Charlie8 DNA MER1_type 45 260 -2157 1300 129 13 67 chr5 11243252 11243583 -188386567 + L1MB1 LINE L1 5157 5474 -743 340 142 55 8 chr5 11243583 11243710 -188386440 + (TA)n Simple_repeat Simple_repeat 2 134 0 4040 136 22 14 chr5 11243710 11244378 -188385772 + L1MB1 LINE L1 5472 6145 -23 189 0 0 0 chr5 11244379 11244400 -188385750 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1887 129 18 7 chr5 11244402 11244682 -188385468 - AluSx SINE Alu -29 283 1 234 91 0 0 chr5 11244733 11244766 -188385384 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 284 217 0 0 chr5 11244853 11244913 -188385237 + Charlie8 DNA MER1_type 1356 1415 -1002 2321 165 22 2 chr5 11245018 11245418 -188384732 + MLT2C2 LTR ERVL 1 408 -56 228 125 0 0 chr5 11245585 11245617 -188384533 + MLT2C2 LTR ERVL 523 554 0 349 321 67 6 chr5 11247174 11247339 -188382811 + MIR SINE MIR 58 232 -30 229 293 40 10 chr5 11247541 11247640 -188382510 + (CATA)n Simple_repeat Simple_repeat 2 103 0 2156 146 18 15 chr5 11248828 11249170 -188380980 + MER61A LTR ERV1 1 343 0 23 0 0 0 chr5 11249244 11249267 -188380883 + AT_rich Low_complexity Low_complexity 1 23 0 241 278 28 0 chr5 11250073 11250145 -188380005 + L1 LINE L1 4498 4571 -1575 469 289 42 33 chr5 11250389 11250656 -188379494 + L1 LINE L1 4918 5190 -971 2097 111 3 38 chr5 11250656 11250971 -188379179 - AluSc SINE Alu -5 304 1 469 289 42 33 chr5 11250971 11251198 -188378952 + L1 LINE L1 5190 5413 -748 728 165 17 9 chr5 11251209 11251354 -188378796 + FLAM_C SINE Alu 2 147 0 1277 251 44 84 chr5 11251364 11252064 -188378086 + L1MC4 LINE L1 7332 8003 -39 402 359 59 30 chr5 11252133 11252349 -188377801 + L2 LINE L2 1799 2034 -1280 2430 36 40 10 chr5 11252349 11252651 -188377499 + AluY SINE Alu 1 311 0 402 359 59 30 chr5 11252651 11252838 -188377312 + L2 LINE L2 2034 2214 -1100 621 296 45 38 chr5 11252885 11253325 -188376825 - MLT1H LTR MaLR 0 549 29 946 218 143 47 chr5 11254706 11255091 -188375059 + MLT1F1 LTR MaLR 144 565 -2 192 77 0 0 chr5 11257039 11257065 -188373085 + (T)n Simple_repeat Simple_repeat 1 26 0 6464 118 62 79 chr5 11257828 11259133 -188371017 + pTR5 LTR ERV1 743 2025 -413 327 229 31 0 chr5 11259133 11259229 -188370921 + LTR30 LTR ERV1 544 642 -80 920 122 0 7 chr5 11259232 11259371 -188370779 + pTR5 LTR ERV1 172 309 -2129 426 255 176 7 chr5 11260195 11260348 -188369802 - MER5A DNA MER1_type -7 182 4 9325 187 19 56 chr5 11260737 11261042 -188369108 - L1MC3 LINE L1 0 7785 7470 1932 123 3 34 chr5 11261042 11261335 -188368815 - AluSx SINE Alu -28 284 1 9325 187 19 56 chr5 11261335 11263149 -188367001 - L1MC3 LINE L1 -315 7470 5744 19935 34 2 0 chr5 11263151 11266214 -188363936 - L1PA10 LINE L1 0 6168 3100 586 267 85 6 chr5 11266879 11267055 -188363095 + MIR SINE MIR 18 207 -55 2011 135 3 3 chr5 11267665 11267962 -188362188 + AluSq SINE Alu 2 298 -15 1814 157 17 0 chr5 11269199 11269360 -188360790 - AluJb SINE Alu -17 295 125 2203 102 3 3 chr5 11269360 11269654 -188360496 - AluSc SINE Alu -15 294 1 1814 157 17 0 chr5 11269654 11269779 -188360371 - AluJb SINE Alu -187 125 4 22 0 0 0 chr5 11269785 11269807 -188360343 + AT_rich Low_complexity Low_complexity 1 22 0 1702 243 165 45 chr5 11270003 11270645 -188359505 + L1ME3A LINE L1 4742 5305 -865 5344 78 0 0 chr5 11270645 11271308 -188358842 + L1PA8 LINE L1 5503 6165 -7 1702 243 165 45 chr5 11271308 11271935 -188358215 + L1ME3A LINE L1 5305 6165 -5 275 227 53 0 chr5 11272810 11272885 -188357265 - 7SK RNA RNA -100 93 15 392 89 69 0 chr5 11272890 11272991 -188357159 + (TA)n Simple_repeat Simple_repeat 1 108 0 739 145 0 90 chr5 11273010 11273155 -188356995 + AluJ SINE Alu 2 133 -169 791 180 12 66 chr5 11273159 11273326 -188356824 + AluJ SINE Alu 130 287 -25 2924 139 21 25 chr5 11273335 11273818 -188356332 - MER31A LTR ERV1 -4 481 1 238 246 15 0 chr5 11275108 11275173 -188354977 - L1MB4 LINE L1 0 6180 6115 253 286 0 0 chr5 11275954 11276031 -188354119 + L2 LINE L2 3235 3311 -2 330 293 14 21 chr5 11276209 11276349 -188353801 + CT-rich Low_complexity Low_complexity 3 141 0 1258 144 0 33 chr5 11276795 11277010 -188353140 - L1MA9 LINE L1 -5 6307 6100 299 180 66 0 chr5 11277800 11277861 -188352289 - L1MA9 LINE L1 -5 6307 6243 1156 199 5 23 chr5 11279425 11279646 -188350504 + MER58A DNA MER1_type 6 222 -2 2233 203 65 15 chr5 11279916 11280394 -188349756 - MLT1D LTR MaLR -3 502 1 444 19 0 0 chr5 11280922 11280975 -188349175 + (A)n Simple_repeat Simple_repeat 1 53 0 1956 158 78 45 chr5 11280986 11281141 -188349009 + MLT1B LTR MaLR 1 150 -240 2243 115 3 0 chr5 11281141 11281446 -188348704 + AluSx SINE Alu 5 310 -2 1956 158 78 45 chr5 11281446 11281664 -188348486 + MLT1B LTR MaLR 150 386 -4 375 188 83 21 chr5 11281709 11281805 -188348345 - LTR16A1 LTR ERVL -351 106 5 305 266 164 83 chr5 11283585 11283745 -188346405 - L2 LINE L2 -197 3116 2970 2525 193 74 55 chr5 11283745 11284288 -188345862 + MLT2B3 LTR ERVL 2 554 0 305 266 164 83 chr5 11284288 11284518 -188345632 - L2 LINE L2 -343 2970 2694 212 289 134 35 chr5 11284839 11284981 -188345169 + MIR3 SINE MIR 30 185 -23 2282 112 0 0 chr5 11285178 11285473 -188344677 + AluSx SINE Alu 1 295 -17 428 279 38 25 chr5 11285730 11285888 -188344262 + LTR67 LTR ERVL 29 188 -369 557 280 116 57 chr5 11286278 11286856 -188343294 - L1MC4a LINE L1 -1904 5904 5293 23 33 0 0 chr5 11287039 11287069 -188343081 + AT_rich Low_complexity Low_complexity 1 30 0 571 294 82 77 chr5 11287239 11288033 -188342117 + L1M4 LINE L1 4027 4824 -1322 600 263 53 13 chr5 11288473 11288625 -188341525 - MER5A DNA MER1_type 0 189 32 396 40 0 0 chr5 11288689 11288739 -188341411 + (CA)n Simple_repeat Simple_repeat 1 50 0 6668 205 25 100 chr5 11288950 11290999 -188339151 + L1M4 LINE L1 5 1934 -4712 1916 139 17 46 chr5 11291035 11291380 -188338770 + THE1B LTR MaLR 30 364 0 1836 154 4 4 chr5 11291380 11291660 -188338490 + AluJb SINE Alu 14 293 -19 586 274 95 21 chr5 11291665 11292192 -188337958 + L1M4 LINE L1 1926 2577 -4069 1510 180 92 30 chr5 11293012 11293412 -188336738 + MER69 DNA AcHobo 2089 2513 -13 1540 53 5 0 chr5 11293643 11293833 -188336317 - AluY SINE Alu -5 306 116 910 286 84 23 chr5 11293974 11294470 -188335680 - L2 LINE L2 -60 3253 2723 347 285 76 83 chr5 11294834 11295449 -188334701 - L1ME4a LINE L1 -43 6078 5468 1541 107 42 106 chr5 11345464 11345747 -188284403 + pTR5 LTR ERV1 172 581 -133 425 35 35 0 chr5 11348569 11348626 -188281524 - L1PA4 LINE L1 -2 6153 6095 1943 140 97 32 chr5 11349693 11350035 -188280115 + THE1B LTR MaLR 1 364 0 414 345 24 73 chr5 11350508 11350890 -188279260 + L2 LINE L2 2883 3245 -27 581 352 101 17 chr5 11350918 11351485 -188278665 - L2 LINE L2 -47 3266 2639 227 298 18 26 chr5 11351522 11351636 -188278514 - L2 LINE L2 -831 2483 2371 2419 159 5 10 chr5 11351734 11352131 -188278019 - MLT2C1 LTR ERVL -2 395 1 1381 201 0 0 chr5 11352183 11352407 -188277743 + MER58A DNA MER1_type 1 224 0 1923 186 8 37 chr5 11352946 11353322 -188276828 + MLT1A1 LTR MaLR 1 365 0 210 324 55 41 chr5 11353582 11353727 -188276423 - MIR SINE MIR 0 262 116 26 0 0 0 chr5 11353824 11353850 -188276300 + AT_rich Low_complexity Low_complexity 1 26 0 2086 141 143 8 chr5 11353897 11354267 -188275883 - MSTA LTR MaLR 0 428 9 911 293 113 3 chr5 11355378 11355706 -188274444 + LTR16C LTR ERVL 128 491 0 567 284 20 26 chr5 11356288 11356507 -188273643 + MIR SINE MIR 41 257 -5 22 0 0 0 chr5 11357990 11358012 -188272138 + AT_rich Low_complexity Low_complexity 1 22 0 406 135 289 19 chr5 11358808 11358912 -188271238 + MER104 DNA Tc2 46 177 -3 278 245 21 21 chr5 11359148 11359242 -188270908 + MER103 DNA DNA 72 165 -1 214 286 131 24 chr5 11359284 11359368 -188270782 - MIR SINE MIR -133 129 37 22 0 0 0 chr5 11360107 11360129 -188270021 + AT_rich Low_complexity Low_complexity 1 22 0 357 283 28 9 chr5 11360231 11360337 -188269813 - MIR3 SINE MIR -30 178 71 2008 98 38 21 chr5 11360891 11361178 -188268972 - AluSp SINE Alu -21 292 1 1181 62 0 0 chr5 11362314 11362458 -188267692 - L1PA4 LINE L1 -3 6152 6009 22 70 0 0 chr5 11362930 11362973 -188267177 + AT_rich Low_complexity Low_complexity 1 43 0 407 200 12 24 chr5 11363649 11363734 -188266416 + MLT1D LTR MaLR 1 84 -421 606 339 178 23 chr5 11363982 11364443 -188265707 - L2 LINE L2 -571 2743 2355 7545 64 2 3 chr5 11364443 11365942 -188264208 + L1PA8 LINE L1 4674 6172 0 606 339 178 23 chr5 11365942 11366273 -188263877 - L2 LINE L2 -959 2355 1828 2413 164 24 12 chr5 11366292 11366706 -188263444 - MSTB1 LTR MaLR -13 419 1 354 359 116 22 chr5 11366713 11367117 -188263033 - L2 LINE L2 -1493 1821 1380 613 108 0 0 chr5 11367222 11367305 -188262845 - AluSg/x SINE Alu -9 301 219 2497 160 33 16 chr5 11367396 11367821 -188262329 - MSTB1 LTR MaLR 0 432 1 241 273 45 45 chr5 11368732 11368864 -188261286 - MLT1J2 LTR MaLR -31 419 288 1033 289 72 35 chr5 11368939 11369395 -188260755 + LTR33 LTR ERVL 3 475 -46 318 291 46 20 chr5 11369414 11369565 -188260585 - MLT1J1 LTR MaLR -287 159 5 207 309 0 0 chr5 11370299 11370354 -188259796 + MIR3 SINE MIR 152 206 -2 7901 32 3 0 chr5 11371549 11372978 -188257172 - L1PA4 LINE L1 -4 6151 4716 8450 27 15 0 chr5 11372978 11373963 -188256187 + L1PA4 LINE L1 3718 4717 -1429 3866 121 73 38 chr5 11374169 11374298 -188255852 - MER41B LTR ERV1 0 635 512 2256 104 7 3 chr5 11374298 11374605 -188255545 + AluSx SINE Alu 1 308 -4 3866 121 73 38 chr5 11374605 11375088 -188255062 - MER41B LTR ERV1 -123 512 1 446 223 126 94 chr5 11375158 11375540 -188254610 - MER31-int LTR ERV1 -1619 3317 2924 202 246 0 18 chr5 11377646 11377703 -188252447 + A-rich Low_complexity Low_complexity 2 57 0 419 202 20 0 chr5 11377843 11377942 -188252208 - LTR37A LTR ERV1 -3 423 323 25 75 0 0 chr5 11378136 11378189 -188251961 + AT_rich Low_complexity Low_complexity 1 53 0 233 321 124 7 chr5 11378234 11378371 -188251779 + MIR3 SINE MIR 32 184 -24 396 263 56 44 chr5 11378400 11378560 -188251590 + MER5A DNA MER1_type 27 188 -1 3284 261 27 15 chr5 11378886 11379890 -188250260 + L1ME4a LINE L1 3176 4191 -1955 632 79 11 0 chr5 11379900 11379989 -188250161 + 5S rRNA rRNA 1 90 -31 540 226 16 8 chr5 11379989 11380113 -188250037 + L1ME4a LINE L1 4195 4319 -1827 2339 96 0 7 chr5 11382216 11382518 -188247632 + AluSc SINE Alu 1 300 -9 465 282 102 63 chr5 11383697 11384140 -188246010 + L1ME4a LINE L1 5566 6025 -96 26 64 0 0 chr5 11384185 11384232 -188245918 + AT_rich Low_complexity Low_complexity 1 47 0 453 251 77 158 chr5 11385852 11386368 -188243782 + L2 LINE L2 2021 2577 -736 454 256 139 0 chr5 11386368 11386505 -188243645 + MIR SINE MIR 22 177 -85 453 251 77 158 chr5 11386505 11386645 -188243505 + L2 LINE L2 2577 2727 -586 2092 113 20 0 chr5 11386645 11386938 -188243212 + AluSx SINE Alu 5 303 -9 453 251 77 158 chr5 11386938 11387270 -188242880 + L2 LINE L2 2727 3053 -260 336 234 9 65 chr5 11387294 11387401 -188242749 + L2 LINE L2 472 572 -2742 310 296 109 23 chr5 11387469 11387726 -188242424 + L2 LINE L2 869 1147 -2167 8042 145 19 7 chr5 11387777 11390198 -188239952 - L1MA3 LINE L1 -6 7718 5264 23625 149 18 16 chr5 11390233 11395558 -188234592 - L1MA3 LINE L1 -2214 5351 1 534 257 219 25 chr5 11395558 11395795 -188234355 + L2 LINE L2 1218 1500 -1814 15275 134 24 15 chr5 11395797 11396873 -188233277 - Tigger1 DNA MER2_type 0 2418 1353 2817 16 0 0 chr5 11396873 11397177 -188232973 - AluYb8 SINE Alu -13 305 2 15275 134 24 15 chr5 11397177 11397996 -188232154 - Tigger1 DNA MER2_type -1065 1353 494 2592 179 17 2 chr5 11397996 11398416 -188231734 + MSTB LTR MaLR 1 426 0 15275 134 24 15 chr5 11398416 11398915 -188231235 - Tigger1 DNA MER2_type -1924 494 1 180 211 0 26 chr5 11398921 11398959 -188231191 + MER5A DNA MER1_type 147 183 -6 949 299 123 43 chr5 11398971 11399624 -188230526 + L2 LINE L2 1505 2209 -1105 228 219 0 0 chr5 11399631 11399672 -188230478 - MLT2C1 LTR ERVL 0 397 357 216 0 0 0 chr5 11399672 11399696 -188230454 + (TG)n Simple_repeat Simple_repeat 1 24 0 1711 173 50 29 chr5 11399731 11400073 -188230077 + MLT2C1 LTR ERVL 30 485 -35 323 26 0 0 chr5 11400069 11400108 -188230042 - MLT2C1 LTR ERVL -356 41 3 * 1173 291 167 16 chr5 11400112 11401069 -188229081 + L2 LINE L2 2215 3313 0 21 0 0 0 chr5 11402588 11402609 -188227541 + AT_rich Low_complexity Low_complexity 1 21 0 808 260 28 44 chr5 11402906 11403156 -188226994 + MIR SINE MIR 15 260 -2 1481 221 88 16 chr5 11403619 11404004 -188226146 - MLT1C LTR MaLR -54 413 1 273 265 140 22 chr5 11404868 11405004 -188225146 + MARNA DNA Mariner 281 432 -154 505 268 60 36 chr5 11405527 11405695 -188224455 - MER5B DNA MER1_type -4 174 3 262 310 112 35 chr5 11406068 11406184 -188223966 + L2 LINE L2 3143 3267 -5 330 238 33 57 chr5 11407064 11407186 -188222964 - MIR3 SINE MIR -7 201 83 22 0 0 0 chr5 11407595 11407617 -188222533 + AT_rich Low_complexity Low_complexity 1 22 0 880 259 32 16 chr5 11408508 11408759 -188221391 - HsTC2c DNA Tc2 -5 724 470 688 285 121 16 chr5 11408796 11409101 -188221049 - MLT1I LTR MaLR -19 390 54 1312 285 21 5 chr5 11409180 11409563 -188220587 - HsTC2c DNA Tc2 -312 417 29 204 97 0 0 chr5 11409595 11409626 -188220524 + (TG)n Simple_repeat Simple_repeat 2 32 0 1951 130 7 36 chr5 11409636 11409943 -188220207 - AluSx SINE Alu -14 298 1 231 36 0 0 chr5 11410193 11410221 -188219929 + (CA)n Simple_repeat Simple_repeat 2 29 0 412 222 111 92 chr5 11410364 11410420 -188219730 - MER5B DNA MER1_type -10 168 115 1976 177 0 0 chr5 11410420 11410731 -188219419 + AluSx SINE Alu 1 311 -1 412 222 111 92 chr5 11410731 11410827 -188219323 - MER5B DNA MER1_type -63 115 13 200 288 0 14 chr5 11411212 11411285 -188218865 + (CATATA)n Simple_repeat Simple_repeat 1 72 0 31 0 0 0 chr5 11413382 11413413 -188216737 + AT_rich Low_complexity Low_complexity 1 31 0 1337 138 23 23 chr5 11413954 11414171 -188215979 - L1MA5A LINE L1 -21 6276 6060 183 263 0 0 chr5 11414395 11414433 -188215717 + L2 LINE L2 3210 3247 -25 420 213 12 0 chr5 11415490 11415570 -188214580 - MER81 DNA DNA -32 82 2 306 73 0 0 chr5 11415724 11415765 -188214385 + (A)n Simple_repeat Simple_repeat 1 41 0 730 188 78 42 chr5 11416159 11416351 -188213799 + MER20 DNA MER1_type 1 199 -20 1638 216 66 46 chr5 11416918 11417417 -188212733 + L1MB7 LINE L1 5666 6174 -10 265 375 15 29 chr5 11417470 11417606 -188212544 + MIR SINE MIR 17 150 -58 767 184 123 0 chr5 11419118 11419281 -188210869 + MER20 DNA MER1_type 37 219 0 227 328 86 8 chr5 11419448 11419576 -188210574 - L2 LINE L2 -170 3102 2965 1559 223 36 31 chr5 11419749 11419913 -188210237 + MLT1A2 LTR MaLR 1 163 -211 1874 132 4 0 chr5 11419913 11420185 -188209965 + AluSx SINE Alu 1 273 -39 1559 223 36 31 chr5 11420185 11420379 -188209771 + MLT1A2 LTR MaLR 163 361 -13 1226 138 10 0 chr5 11420399 11420595 -188209555 + L1PB1 LINE L1 3 200 -6663 15044 155 47 13 chr5 11420595 11421624 -188208526 + L1PB1 LINE L1 634 1627 -5240 2304 96 0 3 chr5 11421624 11421926 -188208224 + AluY SINE Alu 1 301 -10 15044 155 47 13 chr5 11421926 11426874 -188203276 + L1PB1 LINE L1 1627 6865 -2 27 0 0 0 chr5 11426894 11426921 -188203229 + AT_rich Low_complexity Low_complexity 1 27 0 2977 233 84 56 chr5 11426974 11428305 -188201845 + MLT1A2-int LTR MaLR 5 1726 -9 1745 191 77 9 chr5 11428314 11428664 -188201486 + MLT1A2 LTR MaLR 1 374 0 403 164 27 0 chr5 11428809 11428882 -188201268 + L1MD2 LINE L1 6282 6356 -3 421 275 140 0 chr5 11429150 11429328 -188200822 + L2 LINE L2 1821 2023 -1291 2108 208 6 0 chr5 11430006 11430367 -188199783 + MLT1A1 LTR MaLR 1 363 -2 571 321 146 0 chr5 11430528 11430815 -188199335 + L2 LINE L2 2026 2354 -960 547 304 164 44 chr5 11430826 11431276 -188198874 + L2 LINE L2 2808 3311 -2 207 104 62 0 chr5 11431292 11431340 -188198810 + (TA)n Simple_repeat Simple_repeat 1 51 0 245 292 142 33 chr5 11431702 11431822 -188198328 - L2 LINE L2 -39 3233 3101 776 244 135 70 chr5 11431851 11431971 -188198179 + MLT1J LTR MaLR 71 182 -329 1815 189 141 12 chr5 11431971 11432383 -188197767 + MLT1C LTR MaLR 1 465 -2 776 244 135 70 chr5 11432383 11432676 -188197474 + MLT1J LTR MaLR 182 511 0 228 127 55 0 chr5 11434418 11434473 -188195677 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 310 262 103 8 chr5 11435880 11436006 -188194144 + L1ME4a LINE L1 5978 6115 -6 680 187 65 0 chr5 11436496 11436635 -188193515 + L1MB7 LINE L1 6017 6164 -20 1764 173 37 58 chr5 11436696 11437078 -188193072 - THE1C LTR MaLR -1 374 1 1002 256 209 2 chr5 11437411 11437833 -188192317 - MLT1H LTR MaLR -2 547 39 325 359 14 14 chr5 11438443 11438588 -188191562 - MER5B DNA MER1_type 0 178 34 683 290 98 45 chr5 11438865 11439262 -188190888 - MLT1J LTR MaLR -9 502 85 349 292 6 35 chr5 11439365 11439536 -188190614 + L1ME4a LINE L1 5678 5843 -278 217 299 13 13 chr5 11440839 11440916 -188189234 + MIR SINE MIR 65 141 -121 236 327 14 108 chr5 11441067 11441290 -188188860 + L2 LINE L2 2865 3066 -247 2316 96 0 0 chr5 11441348 11441649 -188188501 - AluY SINE Alu -10 301 1 284 289 149 35 chr5 11441676 11441877 -188188273 - L1MC4a LINE L1 -1893 5915 5692 180 0 0 0 chr5 11442020 11442040 -188188110 + (A)n Simple_repeat Simple_repeat 1 20 0 569 235 37 37 chr5 11442252 11442414 -188187736 - MER106B DNA MER1_type -1 1058 897 624 136 0 68 chr5 11442462 11442653 -188187497 + (GGGAA)n Simple_repeat Simple_repeat 2 179 0 219 127 36 18 chr5 11442653 11442708 -188187442 + GA-rich Low_complexity Low_complexity 2 57 0 186 133 0 0 chr5 11442734 11442764 -188187386 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 261 324 135 40 chr5 11442831 11443202 -188186948 - LTR33 LTR ERVL 0 521 116 2209 94 14 3 chr5 11443572 11443858 -188186292 + AluSq SINE Alu 9 297 -16 1048 240 71 106 chr5 11444120 11444176 -188185974 - L1MC4 LINE L1 -782 7179 7123 2679 99 34 6 chr5 11444176 11444530 -188185620 - THE1B LTR MaLR 0 364 1 1048 240 71 106 chr5 11444530 11445041 -188185109 - L1MC4 LINE L1 -838 7123 6637 28 102 0 0 chr5 11445052 11445150 -188185000 + AT_rich Low_complexity Low_complexity 1 98 0 447 330 122 36 chr5 11445749 11446453 -188183697 + L2 LINE L2 1933 2712 -602 1334 208 3 61 chr5 11446453 11446598 -188183552 + AluJb SINE Alu 1 120 -192 240 59 0 0 chr5 11446598 11446632 -188183518 + (CA)n Simple_repeat Simple_repeat 1 34 0 1334 208 3 61 chr5 11446632 11446799 -188183351 + AluJb SINE Alu 120 295 -17 447 330 122 36 chr5 11446799 11446874 -188183276 + L2 LINE L2 2712 2779 -535 191 276 16 114 chr5 11447020 11447110 -188183040 + L2 LINE L2 2935 3011 -261 2310 125 0 0 chr5 11447110 11447423 -188182727 - AluSq SINE Alu 0 313 1 191 276 16 114 chr5 11447423 11447455 -188182695 + L2 LINE L2 3011 3045 -227 312 91 0 0 chr5 11449148 11449175 -188180975 + (TGGA)n Simple_repeat Simple_repeat 1 71 0 312 91 0 0 chr5 11449175 11449219 -188180931 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 288 184 64 21 chr5 11449220 11449593 -188180557 + (TAGA)n Simple_repeat Simple_repeat 1 388 0 267 31 0 0 chr5 11449603 11449635 -188180515 + (CA)n Simple_repeat Simple_repeat 1 32 0 304 308 68 14 chr5 11450130 11450351 -188179799 + L1ME LINE L1 5497 5729 -392 324 294 42 25 chr5 11450706 11450825 -188179325 - L3b LINE CR1 -334 1249 1129 191 287 154 37 chr5 11450913 11451049 -188179101 - MIR3 SINE MIR -38 170 19 4497 101 5 15 chr5 11451783 11452389 -188177761 - MER4A LTR ERV1 0 600 1 21 0 0 0 chr5 11452715 11452736 -188177414 + AT_rich Low_complexity Low_complexity 1 21 0 315 217 101 0 chr5 11452738 11452807 -188177343 - MER116 DNA Mariner -4 76 1 353 305 153 25 chr5 11453197 11453400 -188176750 + MIR SINE MIR 24 252 -10 220 289 132 8 chr5 11454685 11454806 -188175344 + MIR3 SINE MIR 4 139 -69 2315 113 89 15 chr5 11454952 11455289 -188174861 + THE1B LTR MaLR 1 362 -2 1178 155 23 41 chr5 11455356 11455575 -188174575 - MER20 DNA MER1_type -4 215 1 560 293 153 58 chr5 11455740 11456010 -188174140 + ERVL LTR ERVL 900 1143 -4621 192 77 0 0 chr5 11456010 11456036 -188174114 + (GCTG)n Simple_repeat Simple_repeat 1 26 0 560 293 153 58 chr5 11456036 11456503 -188173647 + ERVL LTR ERVL 1143 1707 -4057 289 187 220 0 chr5 11456687 11456778 -188173372 - L2 LINE L2 -1 3312 3202 329 319 11 0 chr5 11456810 11456904 -188173246 + L2 LINE L2 3216 3310 -3 432 230 67 67 chr5 11457087 11457252 -188172898 - MER5A DNA MER1_type 0 189 25 345 299 45 6 chr5 11459645 11459802 -188170348 - L1MCc LINE L1 -4593 2529 2367 785 126 8 8 chr5 11459811 11459972 -188170178 - AluY SINE Alu 0 311 180 383 300 136 36 chr5 11459977 11460601 -188169549 - L1MCc LINE L1 -4761 2361 1429 1732 260 33 18 chr5 11460601 11461058 -188169092 + LTR40c LTR ERVL 1 464 -1 383 300 136 36 chr5 11461058 11461223 -188168927 - L1MCc LINE L1 -5693 1429 1282 2205 118 3 10 chr5 11461286 11461599 -188168551 - AluSx SINE Alu 0 312 2 377 247 0 0 chr5 11462504 11462589 -188167561 - MLT1E LTR MaLR -1 653 569 1519 247 112 34 chr5 11462728 11463193 -188166957 - MLT1E LTR MaLR -90 503 3 338 342 128 53 chr5 11463213 11463661 -188166489 + L2 LINE L2 2725 3207 -65 1137 140 8 103 chr5 11464003 11464246 -188165904 + MLT1A2 LTR MaLR 1 220 -154 1150 256 92 19 chr5 11466427 11466841 -188163309 - LTR16A1 LTR ERVL 0 457 14 1173 158 5 26 chr5 11466855 11467045 -188163105 + MER5A DNA MER1_type 1 186 -3 318 294 76 34 chr5 11467255 11467374 -188162776 - MIR3 SINE MIR -2 206 83 1399 165 15 4 chr5 11467446 11467706 -188162444 + L1MA7 LINE L1 6020 6282 -9 27 0 0 0 chr5 11467735 11467762 -188162388 + AT_rich Low_complexity Low_complexity 1 27 0 501 309 124 0 chr5 11468339 11468533 -188161617 - MIR SINE MIR -36 226 9 24 0 0 0 chr5 11471821 11471845 -188158305 + AT_rich Low_complexity Low_complexity 1 24 0 2060 168 25 98 chr5 11472118 11472606 -188157544 - MER66A LTR ERV1 0 478 27 2695 166 17 23 chr5 11472952 11473422 -188156728 - MLT1C LTR MaLR 0 467 1 340 196 0 150 chr5 11473847 11473975 -188156175 - MER105 DNA DNA -42 162 59 4883 165 10 33 chr5 11473975 11474787 -188155363 + MER54B LTR ERVL 1 793 0 340 196 0 150 chr5 11474787 11474811 -188155339 - MER105 DNA DNA -145 59 33 259 293 55 22 chr5 11475599 11475780 -188154370 + L1MEd LINE L1 595 781 -5338 3353 155 11 33 chr5 11475784 11476418 -188153732 + L1MA4 LINE L1 5666 6285 -15 1017 125 46 0 chr5 11476419 11476571 -188153579 + L1PA11 LINE L1 6016 6174 0 2108 226 97 30 chr5 11476583 11477308 -188152842 - L1M3e LINE L1 -4972 2058 1286 848 181 21 0 chr5 11477309 11477453 -188152697 - L1M3e LINE L1 -6726 304 158 486 233 23 8 chr5 11477451 11477580 -188152570 + L1ME3A LINE L1 5832 5962 -208 * 259 226 60 75 chr5 11477689 11477822 -188152328 + L1ME3A LINE L1 6031 6161 -9 751 300 123 3 chr5 11479577 11479894 -188150256 - LTR16B LTR ERVL -90 374 20 225 0 0 0 chr5 11480016 11480041 -188150109 + (T)n Simple_repeat Simple_repeat 1 25 0 362 258 156 21 chr5 11480062 11480248 -188149902 + MER102b DNA MER1_type 55 265 -76 289 336 0 8 chr5 11480347 11480469 -188149681 + L2 LINE L2 3188 3308 -5 1679 168 0 38 chr5 11481586 11481901 -188148249 - AluJo SINE Alu -9 303 1 2168 87 20 13 chr5 11482251 11482551 -188147599 - AluY SINE Alu -9 302 1 2008 128 3 20 chr5 11483332 11483636 -188146514 + AluSx SINE Alu 1 299 -13 382 296 32 26 chr5 11484081 11484270 -188145880 - L2 LINE L2 -614 2700 2511 572 289 80 56 chr5 11484435 11485398 -188144752 - L1MDa LINE L1 -4512 1703 835 2473 215 18 28 chr5 11486078 11486261 -188143889 + MER68 LTR ERV1 54 237 -325 2463 131 8 3 chr5 11486261 11486621 -188143529 - THE1B LTR MaLR 0 364 3 10406 105 38 35 chr5 11486623 11488199 -188141951 - THE1B-int LTR MaLR 0 1580 1 2448 109 31 14 chr5 11488199 11488557 -188141593 - THE1B LTR MaLR 0 364 1 2473 215 18 28 chr5 11488557 11488872 -188141278 + MER68 LTR ERV1 236 551 -11 292 327 186 10 chr5 11488993 11489299 -188140851 + L2 LINE L2 1950 2309 -1005 280 286 65 0 chr5 11489502 11489579 -188140571 - L2 LINE L2 -5 3308 3227 414 284 15 55 chr5 11491925 11492126 -188138024 - MIR SINE MIR 0 262 70 365 268 5 15 chr5 11492537 11492573 -188137577 + GA-rich Low_complexity Low_complexity 1 36 -455 2077 127 3 10 chr5 11492573 11492873 -188137277 + AluSx SINE Alu 2 299 -13 365 268 5 15 chr5 11492873 11493033 -188137117 + GA-rich Low_complexity Low_complexity 36 491 0 23 0 0 0 chr5 11493591 11493614 -188136536 + AT_rich Low_complexity Low_complexity 1 23 0 268 195 8 154 chr5 11494156 11494279 -188135871 - MER102b DNA MER1_type -4 337 233 29 0 0 0 chr5 11495585 11495614 -188134536 + AT_rich Low_complexity Low_complexity 1 29 0 554 335 23 23 chr5 11497793 11498050 -188132100 + MLT2F LTR ERVL 17 273 -390 1041 196 47 17 chr5 11498054 11498289 -188131861 - MER96B DNA MER1_type? 0 417 176 841 266 64 53 chr5 11498305 11498666 -188131484 + MLT2F LTR ERVL 280 644 -19 908 201 54 10 chr5 11499471 11499675 -188130475 - MER20 DNA MER1_type 0 219 7 1244 204 4 4 chr5 11499876 11500106 -188130044 + L1P3 LINE L1 700 929 -4946 6936 114 17 39 chr5 11500127 11501332 -188128818 + L1PA10 LINE L1 4277 5441 -727 2026 132 7 3 chr5 11501332 11501619 -188128531 + AluSx SINE Alu 1 288 -24 6936 114 17 39 chr5 11501619 11501849 -188128301 + L1PA10 LINE L1 5441 5674 -494 3613 105 20 0 chr5 11501871 11502377 -188127773 + L1PA10 LINE L1 5652 6167 -1 486 260 133 17 chr5 11502599 11502780 -188127370 - MLT1H LTR MaLR -2 547 346 1455 203 14 89 chr5 11502829 11503180 -188126970 - MSTD LTR MaLR 0 396 81 2341 97 3 0 chr5 11503180 11503480 -188126670 + AluY SINE Alu 1 301 -10 1455 203 14 89 chr5 11503480 11503556 -188126594 - MSTD LTR MaLR -315 81 1 777 265 142 0 chr5 11503967 11504186 -188125964 - MIR SINE MIR -7 255 6 26 0 0 0 chr5 11504220 11504246 -188125904 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr5 11504799 11504829 -188125321 + AT_rich Low_complexity Low_complexity 1 30 0 2194 117 3 3 chr5 11505016 11505316 -188124834 - AluSx SINE Alu -11 301 2 2103 122 13 7 chr5 11505317 11505620 -188124530 - AluSx SINE Alu -7 305 1 1107 103 7 0 chr5 11505718 11505873 -188124277 + L1PA15 LINE L1 6002 6157 -8 460 230 121 40 chr5 11505962 11506136 -188124014 - L1ME LINE L1 -470 5700 5513 290 239 229 0 chr5 11506639 11506748 -188123402 - L2 LINE L2 -17 3255 3122 459 301 99 6 chr5 11508130 11508435 -188121715 + L1ME LINE L1 125 465 -5605 236 336 93 25 chr5 11508791 11509199 -188120951 - L2 LINE L2 -835 2479 2044 405 305 64 0 chr5 11509954 11510095 -188120055 + Charlie1 DNA MER1_type 1 150 -2611 * 1426 184 127 31 chr5 11510088 11510473 -188119677 + Charlie1 DNA MER1_type 2282 2703 -58 367 291 28 50 chr5 11511426 11511605 -188118545 + MER5B DNA MER1_type 1 175 -3 718 91 83 0 chr5 11562458 11562579 -188067571 + L1MA5 LINE L1 6160 6290 -10 3417 46 10 0 chr5 11562725 11563140 -188067010 + L1PA5 LINE L1 5734 6152 -2 1831 154 59 0 chr5 11563150 11563436 -188066714 + AluJb SINE Alu 1 303 -9 2358 100 0 6 chr5 11563610 11563921 -188066229 - AluSg SINE Alu -1 309 1 598 258 45 25 chr5 11563997 11564361 -188065789 - L1ME LINE L1 -743 5403 5107 1163 219 120 69 chr5 11564383 11564849 -188065301 + MLT1D LTR MaLR 12 501 -4 243 254 99 28 chr5 11564882 11565024 -188065126 - L1ME LINE L1 -1092 5054 4903 2196 98 6 19 chr5 11565087 11565403 -188064747 + AluSp SINE Alu 1 312 -1 3325 121 2 34 chr5 11565428 11565955 -188064195 + L1PB1 LINE L1 5634 6143 -8 395 322 26 26 chr5 11566457 11566687 -188063463 - L1ME LINE L1 -1461 4685 4456 5242 158 14 5 chr5 11566706 11567602 -188062548 - L1MC1 LINE L1 0 6333 5429 536 260 75 78 chr5 11567739 11568124 -188062026 - MLT1J LTR MaLR -92 419 36 2504 66 0 28 chr5 11568130 11568450 -188061700 + AluY SINE Alu 1 311 0 1453 320 57 26 chr5 11568522 11570185 -188059965 - L1ME LINE L1 -1706 4440 2676 1532 234 122 22 chr5 11570274 11570726 -188059424 - MLT1D LTR MaLR -8 497 1 235 302 52 17 chr5 11570788 11570960 -188059190 - L1ME LINE L1 -3664 2482 2305 2635 48 0 10 chr5 11571566 11571879 -188058271 + AluY SINE Alu 1 310 -1 716 149 0 16 chr5 11573223 11573344 -188056806 + FLAM_C SINE Alu 2 120 -23 584 27 14 0 chr5 11573344 11573418 -188056732 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1455 196 82 12 chr5 11573530 11573871 -188056279 + MLT1A1 LTR MaLR 1 365 0 204 273 140 7 chr5 11574210 11574353 -188055797 - L2 LINE L2 -10 3262 3101 393 205 158 0 chr5 11574781 11574908 -188055242 - MER5C DNA MER1_type -4 320 174 2336 159 12 59 chr5 11574908 11575778 -188054372 + L1MA4A LINE L1 5186 5929 -226 759 177 64 14 chr5 11575778 11575919 -188054231 + THE1C LTR MaLR 1 148 -227 2453 47 14 10 chr5 11576047 11576343 -188053807 + AluY SINE Alu 1 297 -14 2902 138 39 55 chr5 11576789 11576944 -188053206 - L1MA9 LINE L1 -1 6311 6155 180 97 0 0 chr5 11576944 11576975 -188053175 + (TG)n Simple_repeat Simple_repeat 1 31 0 2902 138 39 55 chr5 11576975 11577355 -188052795 - L1MA9 LINE L1 -157 6155 5784 2125 123 0 0 chr5 11577355 11577648 -188052502 - AluSx SINE Alu -19 293 1 2902 138 39 55 chr5 11577648 11577707 -188052443 - L1MA9 LINE L1 -528 5784 5726 647 258 45 10 chr5 11579144 11579342 -188050808 - MIR SINE MIR -57 205 1 404 289 36 36 chr5 11579829 11579995 -188050155 + MIR SINE MIR 65 230 -32 1949 187 52 9 chr5 11580358 11580706 -188049444 - MLT1A1 LTR MaLR -2 363 1 309 239 188 0 chr5 11582299 11582416 -188047734 - MLT1J2 LTR MaLR -245 205 67 240 35 0 0 chr5 11583446 11583475 -188046675 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 221 332 81 58 chr5 11585356 11585823 -188044327 + L2 LINE L2 2820 3297 -16 673 240 91 13 chr5 11585908 11586062 -188044088 - MER20 DNA MER1_type -1 218 53 31 0 0 0 chr5 11586808 11586839 -188043311 + AT_rich Low_complexity Low_complexity 1 31 0 307 300 46 31 chr5 11587075 11587205 -188042945 + MIR SINE MIR 17 148 -60 2017 119 9 35 chr5 11587209 11587528 -188042622 + AluJo SINE Alu 1 311 -1 2320 16 0 0 chr5 11587891 11588146 -188042004 - L1P1 LINE L1 -432 5723 5469 871 50 0 0 chr5 11588146 11588245 -188041905 + L1PA3 LINE L1 6052 6152 -3 247 252 86 28 chr5 11588546 11588683 -188041467 - LTR33A LTR ERVL -3 520 403 546 286 49 35 chr5 11589515 11589718 -188040432 + MIR SINE MIR 16 221 -41 2462 147 24 31 chr5 11589727 11590142 -188040008 - MLT2D LTR ERVL 0 414 3 321 293 40 0 chr5 11591977 11592076 -188038074 + MIR SINE MIR 43 145 -63 681 233 223 40 chr5 11592076 11592449 -188037701 + MLT1H LTR MaLR 2 442 -107 263 258 0 21 chr5 11592594 11592687 -188037463 + L1MC4 LINE L1 6614 6704 -1338 224 189 38 38 chr5 11594141 11594194 -188035956 - MER5A DNA MER1_type 0 189 137 240 214 87 48 chr5 11594212 11594315 -188035835 - L1MC4 LINE L1 -1340 6702 6596 327 258 52 0 chr5 11595063 11595160 -188034990 - L2 LINE L2 -7 3265 3164 327 349 95 11 chr5 11595316 11595580 -188034570 - L1MC4 LINE L1 -2228 5580 5295 609 296 139 18 chr5 11595706 11595980 -188034170 + MLT1I LTR MaLR 75 381 -28 372 250 62 8 chr5 11596564 11596622 -188033528 + HAL1 LINE L1 2289 2342 -165 3402 188 18 38 chr5 11596622 11597011 -188033139 - MLT1E1 LTR MaLR 0 654 282 2255 117 0 0 chr5 11597011 11597309 -188032841 - AluSx SINE Alu -9 303 6 3402 188 18 38 chr5 11597309 11597584 -188032566 - MLT1E1 LTR MaLR -372 282 3 372 250 62 8 chr5 11597584 11597653 -188032497 + HAL1 LINE L1 2342 2423 -84 1696 201 13 87 chr5 11598160 11598632 -188031518 + MLT1D LTR MaLR 61 497 -8 423 256 64 60 chr5 11598672 11598906 -188031244 + HAL1b LINE L1 336 570 -778 659 329 57 57 chr5 11598994 11599416 -188030734 - L2 LINE L2 0 3313 2892 901 256 107 8 chr5 11599428 11599690 -188030460 - MLT1G1 LTR MaLR -307 288 1 826 254 89 44 chr5 11599876 11600214 -188029936 - MLT1H LTR MaLR -7 542 190 746 295 82 63 chr5 11600525 11600745 -188029405 + L1M4 LINE L1 2740 2954 -3192 900 224 50 36 chr5 11600745 11600964 -188029186 - MER58A DNA MER1_type -1 223 2 746 295 82 63 chr5 11600964 11601452 -188028698 + L1M4 LINE L1 2954 3461 -2685 4438 114 48 0 chr5 11601494 11602141 -188028009 + L1PA7 LINE L1 10 687 -5774 20464 89 22 2 chr5 11602142 11605648 -188024502 + L1PA7 LINE L1 2917 6464 -5 436 278 81 45 chr5 11605682 11605905 -188024245 - MIR SINE MIR -3 259 29 328 298 102 15 chr5 11606129 11606334 -188023816 + L1M4 LINE L1 3688 3910 -2236 180 0 0 0 chr5 11606847 11606867 -188023283 + (TA)n Simple_repeat Simple_repeat 2 21 0 328 290 51 54 chr5 11607848 11608124 -188022026 + HAL1b LINE L1 38 312 -1036 2380 92 0 0 chr5 11608148 11608452 -188021698 - AluY SINE Alu -7 304 1 553 269 102 19 chr5 11608573 11608896 -188021254 + HAL1b LINE L1 521 870 -478 1541 173 8 4 chr5 11609112 11609367 -188020783 - AluJb SINE Alu -22 290 35 270 0 0 0 chr5 11609369 11609399 -188020751 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 547 92 0 0 chr5 11609399 11609464 -188020686 - AluSg/x SINE Alu -30 280 216 502 271 73 53 chr5 11610845 11611092 -188019058 + L2 LINE L2 3057 3308 -5 247 299 28 35 chr5 11611254 11611367 -188018783 + L1ME4a LINE L1 5792 5905 -216 1556 216 32 118 chr5 11611367 11611936 -188018214 + MLT2B1 LTR ERVL 1 520 0 247 299 28 35 chr5 11611936 11611966 -188018184 + L1ME4a LINE L1 5905 5934 -187 4903 123 35 11 chr5 11612562 11613304 -188016846 + MER4E LTR ERV1 20 779 0 346 224 0 0 chr5 11613315 11613382 -188016768 + MLT1H LTR MaLR 481 547 -2 316 324 76 0 chr5 11613407 11613552 -188016598 + L1ME4a LINE L1 5964 6119 -2 1349 196 99 54 chr5 11617405 11617610 -188012540 - MLT1B LTR MaLR 0 390 196 2199 117 3 10 chr5 11617610 11617917 -188012233 - AluSc SINE Alu -4 305 1 1349 196 99 54 chr5 11617917 11618084 -188012066 - MLT1B LTR MaLR -194 196 1 404 194 0 11 chr5 11619134 11619227 -188010923 - MER53 DNA DNA -1 188 97 354 233 35 35 chr5 11619669 11619755 -188010395 - MIR SINE MIR -72 136 51 33 0 0 0 chr5 11619826 11619859 -188010291 + AT_rich Low_complexity Low_complexity 1 33 0 225 239 16 43 chr5 11619862 11620046 -188010104 + (TAA)n Simple_repeat Simple_repeat 1 179 0 28 0 0 0 chr5 11620046 11620074 -188010076 + AT_rich Low_complexity Low_complexity 1 28 0 210 318 16 0 chr5 11620120 11620183 -188009967 - L2 LINE L2 -2 3311 3248 621 251 29 12 chr5 11620210 11620381 -188009769 + MLT1J2 LTR MaLR 8 181 -269 2241 185 42 81 chr5 11620381 11620922 -188009228 - MLT2B1 LTR ERVL 0 520 1 406 204 65 19 chr5 11621364 11621472 -188008678 - MIR SINE MIR -32 230 118 2806 113 14 0 chr5 11621487 11621857 -188008293 - THE1C LTR MaLR 0 375 1 15762 90 12 6 chr5 11621907 11624791 -188005359 - L1PA7 LINE L1 -1 6153 3253 4523 166 159 31 chr5 11624807 11625836 -188004314 + L1P LINE L1 589 1749 -4397 1349 181 0 14 chr5 11625875 11626096 -188004054 + MER20 DNA MER1_type 1 218 -1 2660 172 14 2 chr5 11626129 11626548 -188003602 - MSTB LTR MaLR -2 424 1 1516 301 191 43 chr5 11626571 11628096 -188002054 - L2 LINE L2 -427 2887 1137 1785 119 42 18 chr5 11628392 11628678 -188001472 - L1MC1 LINE L1 -8 6325 6033 892 250 83 70 chr5 11628758 11629214 -188000936 - MLT1C LTR MaLR 0 467 6 757 203 23 74 chr5 11629300 11629539 -188000611 + L1MA4 LINE L1 5952 6300 0 28 29 0 0 chr5 11629809 11629844 -188000306 + AT_rich Low_complexity Low_complexity 1 35 0 2120 104 22 0 chr5 11629844 11630122 -188000028 - AluSx SINE Alu -28 284 1 749 226 5 0 chr5 11630202 11630392 -187999758 - L1MA4 LINE L1 0 6300 6110 549 82 12 0 chr5 11630532 11630617 -187999533 - L1P LINE L1 -742 5426 5341 5694 91 0 0 chr5 11630617 11631319 -187998831 + L1PA10 LINE L1 5448 6152 -16 21 36 0 0 chr5 11633343 11633371 -187996779 + AT_rich Low_complexity Low_complexity 1 28 0 584 240 76 29 chr5 11633874 11634273 -187995877 + MLT1D LTR MaLR 4 615 -11 1985 204 78 21 chr5 11636104 11636516 -187993634 - MER89 LTR ERV1 -4 555 168 2381 117 0 61 chr5 11636516 11636875 -187993275 - MER1B DNA MER1_type 0 337 1 1985 204 78 21 chr5 11636875 11636906 -187993244 - MER89 LTR ERV1 -391 168 140 2307 110 59 31 chr5 11636906 11637260 -187992890 + THE1B LTR MaLR 1 364 0 1985 204 78 21 chr5 11637260 11637339 -187992811 - MER89 LTR ERV1 -419 140 2 1406 216 76 38 chr5 11637428 11637873 -187992277 + MLT1C LTR MaLR 6 467 0 28 48 0 0 chr5 11638590 11638632 -187991518 + AT_rich Low_complexity Low_complexity 1 42 0 446 245 73 81 chr5 11639126 11639307 -187990843 + L1ME4a LINE L1 5564 5745 -376 3973 107 58 2 chr5 11639307 11639876 -187990274 + LTR43 LTR ERV1 1 601 -1 446 245 73 81 chr5 11639876 11640003 -187990147 + L1ME4a LINE L1 5745 5871 -250 2588 180 19 41 chr5 11640003 11640519 -187989631 - MLT1D LTR MaLR 0 505 1 446 245 73 81 chr5 11640519 11640593 -187989557 + L1ME4a LINE L1 5871 5944 -177 413 197 26 0 chr5 11640602 11640678 -187989472 - MER21B LTR ERV1 -769 94 17 507 313 129 41 chr5 11640969 11641686 -187988464 - L2 LINE L2 0 3313 2544 238 240 27 53 chr5 11643323 11643398 -187986752 - L3 LINE CR1 -903 674 602 734 200 23 9 chr5 11643738 11643993 -187986157 + MLT2D LTR ERVL 1 220 -194 259 137 0 39 chr5 11643996 11644047 -187986103 + MLT2D LTR ERVL 416 464 0 1373 142 9 108 chr5 11645519 11645835 -187984315 + MLT1B LTR MaLR 1 285 -105 1785 233 97 61 chr5 11645836 11646536 -187983614 - MER50 LTR ERV1 0 734 10 650 188 8 0 chr5 11646533 11646650 -187983500 + MLT1B LTR MaLR 350 467 0 * 7445 54 9 0 chr5 11647111 11648395 -187981755 - L1PA7 LINE L1 -2 6152 4854 4257 151 15 34 chr5 11648685 11649370 -187980780 + LTR8A LTR ERV1 1 672 -55 1920 162 58 36 chr5 11649370 11649735 -187980415 - THE1C LTR MaLR -2 373 1 4257 151 15 34 chr5 11649735 11649790 -187980360 + LTR8A LTR ERV1 672 727 0 2068 182 63 40 chr5 11653155 11653599 -187976551 - MLT1C LTR MaLR -5 462 9 783 236 28 6 chr5 11653862 11654040 -187976110 - MER5A DNA MER1_type -4 185 4 1062 211 124 60 chr5 11654153 11654588 -187975562 + MLT1C LTR MaLR 5 467 0 12323 165 34 43 chr5 11654592 11658051 -187972099 + L1PB1 LINE L1 2367 5792 -510 288 182 73 0 chr5 11658302 11658357 -187971793 + MLT1K LTR MaLR 530 588 0 333 0 0 0 chr5 11658498 11658535 -187971615 + (TG)n Simple_repeat Simple_repeat 2 38 0 2302 153 135 7 chr5 11659287 11659738 -187970412 - MLT2B1 LTR ERVL -11 509 1 2524 107 14 3 chr5 11659842 11660188 -187969962 + L1PB1 LINE L1 5799 6148 -3 1964 131 67 64 chr5 11661620 11661994 -187968156 - THE1C LTR MaLR 0 375 1 24 0 0 0 chr5 11662083 11662107 -187968043 + AT_rich Low_complexity Low_complexity 1 24 0 362 284 69 17 chr5 11662556 11662672 -187967478 - MIR3 SINE MIR -38 170 49 261 0 0 0 chr5 11663393 11663422 -187966728 + (TG)n Simple_repeat Simple_repeat 2 30 0 1003 238 38 61 chr5 11664924 11665319 -187964831 + L1MA9 LINE L1 5902 6287 -25 728 319 138 30 chr5 11665734 11666542 -187963608 + L2 LINE L2 2186 3311 -2 1029 172 60 60 chr5 11667016 11667249 -187962901 - MER106A DNA MER1_type -1 235 3 2997 156 4 2 chr5 11668781 11669269 -187960881 + L1MB2 LINE L1 5333 5821 -350 1998 98 56 0 chr5 11669272 11669538 -187960612 + AluSq SINE Alu 1 281 -32 339 136 0 0 chr5 11669538 11669597 -187960553 + (GGA)n Simple_repeat Simple_repeat 3 61 0 681 137 5 13 chr5 11669597 11669717 -187960433 + L1MB2 LINE L1 5814 5933 -238 486 71 0 14 chr5 11669717 11669785 -187960365 + L1MB2 LINE L1 6096 6164 -7 681 137 5 13 chr5 11669785 11669809 -187960341 + L1MB2 LINE L1 5933 6164 -7 219 261 31 0 chr5 11669958 11670023 -187960127 + (CAGAGA)n Simple_repeat Simple_repeat 2 68 0 1089 231 33 0 chr5 11670428 11670640 -187959510 + MER20 DNA MER1_type 1 219 0 2025 171 49 38 chr5 11673522 11673971 -187956179 + Charlie4a DNA MER1_type 44 497 -11 1102 156 91 0 chr5 11674278 11674477 -187955673 - L1PA16 LINE L1 -3 6163 5947 202 346 28 28 chr5 11674584 11674691 -187955459 - MIR3 SINE MIR -32 176 70 1677 159 6 28 chr5 11674767 11675093 -187955057 - L1MA6 LINE L1 0 6300 5982 682 271 44 6 chr5 11675098 11675320 -187954830 - MIR SINE MIR -7 255 30 317 241 98 45 chr5 11675466 11675599 -187954551 + MIR SINE MIR 121 260 -2 1882 191 46 114 chr5 11676291 11677096 -187953054 - LTR8A LTR ERV1 0 727 1 35938 68 7 4 chr5 11677843 11683968 -187946182 + L1PA5 LINE L1 5 6154 0 641 167 0 0 chr5 11684596 11684710 -187945440 + L1MA8 LINE L1 6156 6269 -22 21 0 0 0 chr5 11685184 11685205 -187944945 + AT_rich Low_complexity Low_complexity 1 21 0 324 262 0 12 chr5 11685589 11685673 -187944477 - Charlie7 DNA MER1_type 0 2612 2530 1174 283 68 14 chr5 11685680 11686107 -187944043 + LTR16A LTR ERVL 1 450 0 862 228 34 15 chr5 11686257 11686463 -187943687 - MLT1A1 LTR MaLR 0 365 156 1155 140 4 72 chr5 11687190 11687426 -187942724 + L1PA13 LINE L1 1532 1751 -5036 1307 129 143 34 chr5 11687426 11687613 -187942537 - MSTA LTR MaLR 0 428 263 186 43 0 0 chr5 11687613 11687636 -187942514 + (GA)n Simple_repeat Simple_repeat 1 23 0 1307 129 143 34 chr5 11687636 11687772 -187942378 - MSTA LTR MaLR -165 263 1 5661 220 33 7 chr5 11687773 11689474 -187940676 + L1PA13 LINE L1 1748 3494 -3303 43047 56 4 0 chr5 11689486 11695618 -187934532 + L1PA5 LINE L1 1 6153 -1 9812 197 36 13 chr5 11695598 11697738 -187932412 + L1PA13 LINE L1 3451 5639 -1158 * 37589 93 13 10 chr5 11697836 11703952 -187926198 - L1PA6 LINE L1 -13 6141 11 1445 203 7 0 chr5 11703940 11704245 -187925905 + L1P LINE L1 4931 5237 -909 * 1578 174 18 18 chr5 11705720 11706025 -187924125 + AluJo SINE Alu 1 305 0 542 287 24 12 chr5 11706862 11707026 -187923124 + MIR SINE MIR 35 200 -62 671 220 69 0 chr5 11707029 11707188 -187922962 + MER45A DNA AcHobo 1 170 -8 6529 193 38 32 chr5 11707620 11710509 -187919641 + L1M3f LINE L1 4 2919 -3409 954 190 0 0 chr5 11710509 11710667 -187919483 + L1PB4 LINE L1 5996 6153 -3 6529 193 38 32 chr5 11710667 11711387 -187918763 + L1M3f LINE L1 2919 3633 -2695 20907 165 50 14 chr5 11711387 11718459 -187911691 - L1MA1 LINE L1 -178 7543 13 542 315 40 46 chr5 11718500 11719012 -187911138 - MER115 DNA AcHobo -28 665 54 358 305 17 0 chr5 11719804 11719922 -187910228 - MIR3 SINE MIR -7 201 82 191 308 103 26 chr5 11720154 11720271 -187909879 + MIR3 SINE MIR 13 138 -70 425 344 116 43 chr5 11720887 11721189 -187908961 + L2 LINE L2 2949 3272 0 285 251 161 39 chr5 11722692 11722922 -187907228 + MLT1I LTR MaLR 195 409 0 308 315 175 22 chr5 11723711 11724076 -187906074 + L2 LINE L2 1991 2411 -903 1377 190 61 98 chr5 11724089 11724363 -187905787 + MLT1C LTR MaLR 8 258 -209 1666 157 7 23 chr5 11724363 11724669 -187905481 + L1MA4 LINE L1 5999 6299 -1 1377 190 61 98 chr5 11724669 11724872 -187905278 + MLT1C LTR MaLR 258 467 0 229 318 77 27 chr5 11724881 11725142 -187905008 + L2 LINE L2 2437 2710 -604 322 271 79 50 chr5 11725674 11725814 -187904336 + L2 LINE L2 3103 3246 -26 3137 160 19 6 chr5 11726882 11727407 -187902743 - L1MB3 LINE L1 -1 6182 5651 188 227 15 30 chr5 11727803 11727869 -187902281 + MIR SINE MIR 185 249 -13 1435 194 100 71 chr5 11727992 11728608 -187901542 - MLT1D LTR MaLR 0 505 1 1021 165 28 6 chr5 11729558 11729734 -187900416 + MER2 DNA MER2_type 1 180 -165 * 1189 152 3 21 chr5 11729711 11730092 -187900058 + LTR32 LTR ERVL 6 471 0 400 56 19 0 chr5 11730092 11730140 -187900010 + MER2 DNA MER2_type 162 210 -135 1430 113 156 19 chr5 11730141 11730398 -187899752 - LTR18B LTR ERVL 0 614 323 870 184 24 68 chr5 11730394 11730601 -187899549 - LTR18B LTR ERVL -416 198 1 * 356 277 0 0 chr5 11730636 11730701 -187899449 + MER2 DNA MER2_type 280 344 -1 232 184 75 98 chr5 11732735 11732909 -187897241 - Charlie7 DNA MER1_type -16 2596 2427 1925 148 20 7 chr5 11733084 11733382 -187896768 + AluJb SINE Alu 2 303 -9 267 294 52 37 chr5 11733472 11733608 -187896542 - L2 LINE L2 -188 3084 2947 266 222 116 37 chr5 11733610 11733740 -187896410 - MER5A DNA MER1_type -2 176 49 794 203 88 39 chr5 11733940 11734239 -187895911 - MLT1A2 LTR MaLR -4 370 1 258 302 112 39 chr5 11734602 11734834 -187895316 + MLT1K LTR MaLR 340 588 0 2526 52 0 0 chr5 11734917 11735222 -187894928 - AluY SINE Alu -6 305 1 226 272 39 39 chr5 11735730 11735833 -187894317 + L3 LINE CR1 1474 1576 -1 283 229 72 24 chr5 11735940 11736023 -187894127 - MLT1K LTR MaLR 0 588 502 520 236 27 0 chr5 11736271 11736381 -187893769 + MER81 DNA DNA 2 114 0 1733 164 6 25 chr5 11737647 11738045 -187892105 + AluJo SINE Alu 1 392 0 4873 144 2 188 chr5 11738465 11739142 -187891008 - MSTA-int LTR MaLR -497 1083 556 1205 126 0 22 chr5 11739142 11739324 -187890826 - AluSx SINE Alu -95 217 40 4873 144 2 188 chr5 11739324 11739792 -187890358 - MSTA-int LTR MaLR -1024 556 3 2823 129 26 5 chr5 11739794 11740213 -187889937 - MSTA LTR MaLR 0 428 1 209 138 17 52 chr5 11740245 11740303 -187889847 + (TA)n Simple_repeat Simple_repeat 2 57 0 22 35 0 0 chr5 11740436 11740465 -187889685 + AT_rich Low_complexity Low_complexity 1 29 0 310 241 161 0 chr5 11740474 11740561 -187889589 + L1MEd LINE L1 4 104 -6015 1681 147 110 40 chr5 11740566 11740912 -187889238 - THE1C LTR MaLR -5 370 1 448 234 66 144 chr5 11741172 11741445 -187888705 + L1MEd LINE L1 2132 2425 -3704 1877 149 0 0 chr5 11741445 11741761 -187888389 + AluSx SINE Alu 1 316 0 448 234 66 144 chr5 11741761 11742255 -187887895 + L1MEd LINE L1 2425 2840 -3289 561 274 19 42 chr5 11743555 11743725 -187886425 + L2 LINE L2 2317 2482 -832 2047 202 44 13 chr5 11743725 11744176 -187885974 + MLT1C LTR MaLR 1 465 -2 561 274 19 42 chr5 11744176 11744220 -187885930 + L2 LINE L2 2482 2526 -788 454 280 140 51 chr5 11744258 11744651 -187885499 + L2 LINE L2 2842 3269 -44 406 251 64 29 chr5 11745156 11745315 -187884835 + L1ME LINE L1 5313 5476 -682 231 237 0 17 chr5 11745350 11745409 -187884741 + L1ME LINE L1 5543 5600 -521 2330 60 0 3 chr5 11745679 11745977 -187884173 - AluY SINE Alu -14 297 1 246 58 0 58 chr5 11748308 11748360 -187881790 + (TA)n Simple_repeat Simple_repeat 1 49 0 1321 176 46 80 chr5 11748360 11748812 -187881338 + THE1C LTR MaLR 2 428 0 2206 95 0 0 chr5 11748876 11749172 -187880978 + AluSg SINE Alu 1 296 -14 2820 176 20 20 chr5 11749311 11749869 -187880281 + MER89 LTR ERV1 1 558 -1 906 135 0 0 chr5 11750189 11750322 -187879828 + AluJb SINE Alu 1 133 -179 2217 186 42 2 chr5 11751575 11751999 -187878151 + MLT1C LTR MaLR 1 441 -26 5611 107 102 78 chr5 11752086 11753636 -187876514 + pTR5 LTR ERV1 743 2438 0 186 167 0 0 chr5 11753996 11754026 -187876124 + MER5A DNA MER1_type 1 30 -159 196 111 0 0 chr5 11754039 11754066 -187876084 + MER5A DNA MER1_type 2 28 -161 303 274 151 0 chr5 11754147 11754253 -187875897 + MER5A DNA MER1_type 67 188 -1 1108 73 0 0 chr5 11754566 11754702 -187875448 - AluSq/x SINE Alu -176 136 1 332 324 43 29 chr5 11755063 11755270 -187874880 + L1M4 LINE L1 2278 2487 -3659 588 321 82 56 chr5 11755356 11755444 -187874706 + L1M4 LINE L1 2645 2729 -3417 2429 122 55 18 chr5 11755444 11755878 -187874272 + LTR7 LTR ERV1 1 450 0 588 321 82 56 chr5 11755878 11756341 -187873809 + L1M4 LINE L1 2729 3210 -2936 440 181 96 117 chr5 11756720 11756840 -187873310 - HAL1 LINE L1 -794 1713 1597 2217 95 0 7 chr5 11756840 11757145 -187873005 - AluSg SINE Alu -7 303 1 440 181 96 117 chr5 11757145 11757212 -187872938 - HAL1 LINE L1 -910 1597 1530 206 269 0 19 chr5 11757780 11757832 -187872318 - MIR3 SINE MIR -150 58 8 279 286 0 0 chr5 11758013 11758083 -187872067 - L2 LINE L2 0 3272 3203 2998 191 50 5 chr5 11759369 11759518 -187870632 + L1MB5 LINE L1 5526 5667 -507 273 119 0 0 chr5 11759518 11759560 -187870590 + (TA)n Simple_repeat Simple_repeat 2 43 0 2998 191 50 5 chr5 11759560 11760011 -187870139 + L1MB5 LINE L1 5667 6153 -21 1204 213 61 94 chr5 11761347 11761825 -187868325 - MLT1C LTR MaLR 0 467 6 1389 196 28 89 chr5 11763320 11763713 -187866437 + MLT1B LTR MaLR 20 388 -2 311 283 48 62 chr5 11763905 11764050 -187866100 + L1ME LINE L1 5572 5714 -407 2141 269 60 49 chr5 11764075 11764994 -187865156 - L1MC4 LINE L1 -1 8041 7113 289 375 15 0 chr5 11765087 11765223 -187864927 + ERVL LTR ERVL 2890 3027 -2627 1832 158 59 24 chr5 11765473 11765814 -187864336 - MLT1A1 LTR MaLR -12 353 1 337 290 97 24 chr5 11765949 11766156 -187863994 + ERVL LTR ERVL 5091 5312 -452 495 267 107 40 chr5 11766446 11766660 -187863490 + LTR33 LTR ERVL 1 215 -306 183 320 0 53 chr5 11766901 11766976 -187863174 - MIR SINE MIR -146 116 46 319 331 40 6 chr5 11767202 11767377 -187862773 + LTR16C LTR ERVL 279 459 -32 312 331 31 15 chr5 11767451 11767581 -187862569 + HAL1 LINE L1 1519 1650 -857 1705 142 0 58 chr5 11767596 11767905 -187862245 + AluSx SINE Alu 1 291 -21 518 225 69 74 chr5 11767911 11768233 -187861917 + MLT1E3 LTR MaLR 1 404 -220 1560 108 38 25 chr5 11768262 11768502 -187861648 + L1PB4 LINE L1 5912 6154 -2 349 130 29 14 chr5 11768527 11768596 -187861554 + MLT1E3 LTR MaLR 555 624 0 359 280 19 9 chr5 11768605 11768712 -187861438 + HAL1 LINE L1 1659 1766 -741 221 83 28 0 chr5 11769080 11769116 -187861034 + (GA)n Simple_repeat Simple_repeat 2 38 0 505 325 36 32 chr5 11769248 11769497 -187860653 + HAL1 LINE L1 2249 2498 -9 208 206 0 0 chr5 11769518 11769552 -187860598 + polypurine Low_complexity Low_complexity 3 36 0 249 331 8 31 chr5 11770176 11770306 -187859844 - MIR SINE MIR -50 212 86 1064 260 107 17 chr5 11770324 11770670 -187859480 - MLT1E2 LTR MaLR -249 377 1 222 37 0 0 chr5 11771440 11771467 -187858683 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2063 94 4 0 chr5 11771473 11771749 -187858401 - AluSp SINE Alu -36 277 1 1567 258 132 25 chr5 11771757 11772281 -187857869 - MLT1G1 LTR MaLR -12 583 4 2375 154 49 2 chr5 11772410 11772819 -187857331 + MSTA LTR MaLR 1 428 0 224 242 121 0 chr5 11773921 11774012 -187856138 - MIR SINE MIR -79 183 82 2128 113 40 64 chr5 11774241 11774404 -187855746 + THE1B LTR MaLR 1 166 -198 2003 102 3 35 chr5 11774404 11774717 -187855433 - AluSq SINE Alu -10 303 1 2128 113 40 64 chr5 11774717 11774926 -187855224 + THE1B LTR MaLR 166 364 0 1645 207 264 13 chr5 11774947 11775648 -187854502 + Charlie7 DNA MER1_type 1505 2381 -231 2087 113 0 10 chr5 11775732 11776041 -187854109 + AluSx SINE Alu 1 306 -6 235 375 65 39 chr5 11776358 11776590 -187853560 + L2 LINE L2 3030 3267 -5 1963 182 39 51 chr5 11777633 11777804 -187852346 + MLT1C LTR MaLR 6 178 -289 2055 106 3 0 chr5 11777804 11778096 -187852054 + AluSx SINE Alu 1 293 -19 1963 182 39 51 chr5 11778096 11778392 -187851758 + MLT1C LTR MaLR 178 467 0 224 280 262 0 chr5 11778594 11778701 -187851449 - L2 LINE L2 -253 3060 2926 418 159 0 0 chr5 11778705 11778774 -187851376 + AluJ/FLAM SINE Alu 1 69 -243 409 231 77 101 chr5 11778776 11778984 -187851166 + AluJb SINE Alu 2 204 -98 700 175 9 0 chr5 11778986 11779100 -187851050 + FLAM_C SINE Alu 2 116 -17 1200 234 106 32 chr5 11779296 11779731 -187850419 - MLT1C LTR MaLR 0 467 1 2248 105 0 3 chr5 11831105 11831418 -187798732 + AluSx SINE Alu 1 312 0 246 156 266 0 chr5 11831966 11832030 -187798120 + L2 LINE L2 3231 3311 -2 213 253 22 88 chr5 11832531 11832622 -187797528 - MER5B DNA MER1_type -69 109 25 550 249 26 17 chr5 11832917 11833106 -187797044 + L1MC5 LINE L1 7061 7250 -728 443 188 75 30 chr5 11833245 11833378 -187796772 + L1MC5 LINE L1 7299 7437 -524 424 288 196 7 chr5 11833387 11833540 -187796610 + MER5A DNA MER1_type 8 189 0 282 223 168 29 chr5 11833558 11833832 -187796318 + L1MC5 LINE L1 7452 7763 -198 543 161 59 11 chr5 11834215 11834331 -187795819 + LTR8A LTR ERV1 1 105 -586 4580 109 14 33 chr5 11834331 11834867 -187795283 + LTR8 LTR ERV1 1 522 -169 2357 82 3 10 chr5 11834867 11835173 -187794977 + AluSp SINE Alu 1 304 -9 4580 109 14 33 chr5 11835173 11835340 -187794810 + LTR8 LTR ERV1 522 691 0 1541 104 36 0 chr5 11835530 11835750 -187794400 + AluSx SINE Alu 1 228 -84 37 0 0 0 chr5 11835750 11835787 -187794363 + AT_rich Low_complexity Low_complexity 1 37 0 500 243 99 7 chr5 11836050 11836148 -187794002 - MER5B DNA MER1_type -7 171 53 626 171 97 17 chr5 11836148 11836323 -187793827 - MER5A DNA MER1_type 0 189 1 500 243 99 7 chr5 11836323 11836376 -187793774 - MER5B DNA MER1_type -125 53 6 221 231 115 77 chr5 11837028 11837132 -187793018 + MIR3 SINE MIR 91 198 -10 298 305 90 6 chr5 11837920 11838087 -187792063 + LTR16C LTR ERVL 279 459 -32 312 331 31 15 chr5 11838161 11838291 -187791859 + HAL1 LINE L1 1519 1650 -857 1696 149 0 58 chr5 11838306 11838615 -187791535 + AluSx SINE Alu 1 291 -21 392 205 77 51 chr5 11838621 11838738 -187791412 + MLT1E2 LTR MaLR 1 120 -506 476 257 11 73 chr5 11838778 11838957 -187791193 + MLT1E2 LTR MaLR 233 400 -226 1542 113 38 25 chr5 11838986 11839226 -187790924 + L1PB4 LINE L1 5912 6154 -2 349 130 29 14 chr5 11839251 11839320 -187790830 + MLT1E2 LTR MaLR 555 624 0 359 280 19 9 chr5 11839329 11839436 -187790714 + HAL1 LINE L1 1659 1766 -741 181 81 27 27 chr5 11839804 11839841 -187790309 + (GA)n Simple_repeat Simple_repeat 2 38 0 500 329 36 32 chr5 11839973 11840222 -187789928 + HAL1 LINE L1 2249 2498 -9 208 206 0 0 chr5 11840243 11840277 -187789873 + polypurine Low_complexity Low_complexity 3 36 0 249 331 8 31 chr5 11840901 11841031 -187789119 - MIR SINE MIR -50 212 86 1085 257 107 17 chr5 11841049 11841395 -187788755 - MLT1E2 LTR MaLR -249 377 1 222 37 0 0 chr5 11842165 11842192 -187787958 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2055 94 4 0 chr5 11842198 11842474 -187787676 - AluSp SINE Alu -36 277 1 1593 254 132 25 chr5 11842482 11843006 -187787144 - MLT1G1 LTR MaLR -12 583 4 2361 157 49 2 chr5 11843135 11843544 -187786606 + MSTA LTR MaLR 1 428 0 224 242 121 0 chr5 11844647 11844738 -187785412 - MIR SINE MIR -79 183 82 2128 113 40 64 chr5 11844967 11845130 -187785020 + THE1B LTR MaLR 1 166 -198 2003 102 3 35 chr5 11845130 11845443 -187784707 - AluSq SINE Alu -10 303 1 2128 113 40 64 chr5 11845443 11845652 -187784498 + THE1B LTR MaLR 166 364 0 1645 207 264 13 chr5 11845673 11846374 -187783776 + Charlie7 DNA MER1_type 1505 2381 -231 2087 113 0 10 chr5 11846458 11846767 -187783383 + AluSx SINE Alu 1 306 -6 235 375 65 39 chr5 11847084 11847316 -187782834 + L2 LINE L2 3030 3267 -5 1956 181 38 53 chr5 11848359 11848530 -187781620 + MLT1C LTR MaLR 6 178 -289 2101 100 3 0 chr5 11848530 11848821 -187781329 + AluSx SINE Alu 1 292 -20 1956 181 38 53 chr5 11848821 11849118 -187781032 + MLT1C LTR MaLR 178 467 0 224 280 262 0 chr5 11849320 11849427 -187780723 - L2 LINE L2 -253 3060 2926 418 159 0 0 chr5 11849431 11849500 -187780650 + AluJ/FLAM SINE Alu 1 69 -243 405 191 0 0 chr5 11849502 11849570 -187780580 + AluJ/FLAM SINE Alu 2 69 -233 700 175 9 0 chr5 11849572 11849686 -187780464 + FLAM_C SINE Alu 2 116 -17 1181 237 106 32 chr5 11849882 11850317 -187779833 - MLT1C LTR MaLR 0 467 1 1506 216 35 37 chr5 11851582 11851957 -187778193 + MLT1A2 LTR MaLR 1 374 0 705 91 83 0 chr5 11852407 11852528 -187777622 + L1MA5 LINE L1 6160 6290 -10 3377 51 10 0 chr5 11852674 11853089 -187777061 + L1PA5 LINE L1 5734 6152 -2 1739 155 58 0 chr5 11853099 11853390 -187776760 + AluJb SINE Alu 1 308 -4 277 319 89 27 chr5 11853475 11853732 -187776418 - L1MC4a LINE L1 -1878 5930 5658 2240 99 0 6 chr5 11853746 11854058 -187776092 - AluSg SINE Alu 0 310 1 576 258 45 25 chr5 11854134 11854498 -187775652 - L1MC4a LINE L1 -743 5403 5107 1186 219 120 69 chr5 11854520 11854986 -187775164 + MLT1D LTR MaLR 12 501 -4 232 254 99 28 chr5 11855019 11855161 -187774989 - L1MC4a LINE L1 -1092 5054 4903 284 224 0 0 chr5 11855165 11855223 -187774927 - LTR16B LTR ERVL 0 464 407 2046 101 6 19 chr5 11855224 11855540 -187774610 + AluSp SINE Alu 1 312 -1 2909 123 9 60 chr5 11855565 11856100 -187774050 + L1PB1 LINE L1 5634 6141 -10 381 339 17 17 chr5 11856697 11856927 -187773223 - L1MC4a LINE L1 -1461 4685 4456 5242 156 14 6 chr5 11856945 11857842 -187772308 - L1MC1 LINE L1 0 6333 5429 545 260 75 78 chr5 11857979 11858364 -187771786 - MLT1J LTR MaLR -92 419 36 2385 62 0 28 chr5 11858370 11858690 -187771460 + AluY SINE Alu 1 311 0 310 289 54 43 chr5 11858764 11859041 -187771109 - L1MC4a LINE L1 -1706 4440 4161 21 36 0 0 chr5 11859199 11859227 -187770923 + AT_rich Low_complexity Low_complexity 1 28 0 1306 321 52 25 chr5 11859239 11860517 -187769633 - L1MC4a LINE L1 -2158 3988 2676 1549 234 122 22 chr5 11860607 11861059 -187769091 - MLT1D LTR MaLR -8 497 1 466 325 63 5 chr5 11861087 11861293 -187768857 - L1MC4a LINE L1 -3624 2522 2305 2460 51 0 10 chr5 11861900 11862213 -187767937 + AluY SINE Alu 1 310 -1 753 141 0 16 chr5 11863556 11863677 -187766473 + FLAM_C SINE Alu 2 120 -23 548 29 14 0 chr5 11863677 11863747 -187766403 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1442 202 82 12 chr5 11863859 11864200 -187765950 + MLT1A1 LTR MaLR 1 365 0 228 269 163 14 chr5 11864539 11864680 -187765470 - L2 LINE L2 -10 3262 3101 456 214 153 0 chr5 11865104 11865235 -187764915 - MER5C DNA MER1_type 0 324 174 1955 189 15 94 chr5 11865235 11866105 -187764045 + L1PA2 LINE L1 5186 5929 -226 * 2764 125 34 26 chr5 11865753 11866105 -187764045 + L1MA4A LINE L1 5580 5938 -365 1904 163 35 35 chr5 11866105 11866480 -187763670 + THE1C LTR MaLR 1 375 0 2764 125 34 26 chr5 11866480 11866592 -187763558 + L1MA4A LINE L1 5938 6048 -255 2795 86 23 13 chr5 11866592 11866989 -187763161 + MLT2A1 LTR ERVL 1 401 -43 259 101 13 51 chr5 11866989 11867068 -187763082 + (TA)n Simple_repeat Simple_repeat 2 77 0 256 23 0 47 chr5 11867176 11867219 -187762931 + (TA)n Simple_repeat Simple_repeat 2 42 0 1326 113 28 0 chr5 11867266 11867479 -187762671 + L1MA4 LINE L1 6064 6282 -18 628 226 44 0 chr5 11867502 11867639 -187762511 - MER5C DNA MER1_type -165 159 17 237 138 0 138 chr5 11867710 11867768 -187762382 + MER58 DNA MER1_type 208 257 -84 1344 218 85 37 chr5 11867954 11868361 -187761789 - MLT1C LTR MaLR -3 464 30 1555 171 123 50 chr5 11868361 11868453 -187761697 + MSTC LTR MaLR 1 85 -343 685 46 0 0 chr5 11868453 11868540 -187761610 + L1PA4 LINE L1 6066 6152 -3 1555 171 123 50 chr5 11868540 11868845 -187761305 + MSTC LTR MaLR 85 427 -1 395 313 148 28 chr5 11868888 11869064 -187761086 - MIR SINE MIR -17 245 49 512 323 65 40 chr5 11869105 11869306 -187760844 - MIR SINE MIR -10 252 47 466 225 230 16 chr5 11869478 11869669 -187760481 - MLT1J2 LTR MaLR -144 306 75 214 125 75 0 chr5 11869773 11869813 -187760337 + L2 LINE L2 3228 3270 -2 218 339 0 0 chr5 11869909 11869968 -187760182 - MER91B DNA MER1_type -7 183 125 570 150 53 75 chr5 11870014 11870147 -187760003 - MER91B DNA MER1_type -60 130 1 606 172 25 0 chr5 11871024 11871146 -187759004 - L1MC1 LINE L1 -1 6332 6208 1525 160 42 17 chr5 11871172 11871459 -187758691 - AluJo SINE Alu -18 294 1 26 50 0 0 chr5 11871461 11871501 -187758649 + AT_rich Low_complexity Low_complexity 1 40 0 1256 102 0 5 chr5 11871728 11871914 -187758236 - L1PA13 LINE L1 0 6163 5979 1611 168 20 23 chr5 11874961 11875265 -187754885 + AluJb SINE Alu 1 303 -9 21 0 0 0 chr5 11875265 11875286 -187754864 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 11875521 11875551 -187754599 + AT_rich Low_complexity Low_complexity 1 30 0 1437 176 17 76 chr5 11876032 11876356 -187753794 - AluJo SINE Alu 0 307 2 318 338 53 7 chr5 11876714 11876865 -187753285 - MIR SINE MIR -11 251 94 2190 89 0 32 chr5 11877089 11877405 -187752745 + AluSc SINE Alu 4 309 0 432 249 160 22 chr5 11877485 11877666 -187752484 + MIR SINE MIR 57 262 0 25 31 0 0 chr5 11877771 11877803 -187752347 + AT_rich Low_complexity Low_complexity 1 32 0 442 146 29 19 chr5 11879400 11879503 -187750647 - MER20B DNA MER1_type 0 783 680 3714 157 21 25 chr5 11879508 11880188 -187749962 + L1MB2 LINE L1 5452 6128 -43 330 167 97 0 chr5 11880225 11880297 -187749853 - MSTD LTR MaLR -4 392 314 * 669 111 46 9 chr5 11880294 11880402 -187749748 - MSTD LTR MaLR -284 112 1 6924 228 47 38 chr5 11880402 11882121 -187748029 - MSTD-int LTR MaLR 0 1735 2 1910 196 48 5 chr5 11882125 11882503 -187747647 - MSTD LTR MaLR -2 394 1 459 254 135 36 chr5 11882507 11883061 -187747089 - MER20B DNA MER1_type -81 702 16 1720 71 4 0 chr5 11883256 11883482 -187746668 + L1PA8 LINE L1 5944 6170 -2 4278 122 9 8 chr5 11883980 11884614 -187745536 + MER41B LTR ERV1 1 635 0 250 220 20 0 chr5 11884775 11884825 -187745325 - L2 LINE L2 0 3272 3222 241 230 92 11 chr5 11886941 11887028 -187743122 + MLT1J1 LTR MaLR 345 438 -8 2395 93 0 0 chr5 11887045 11887345 -187742805 + AluSc SINE Alu 3 302 -7 1022 184 0 17 chr5 11887361 11887540 -187742610 + AluJo SINE Alu 5 180 -132 1524 205 10 7 chr5 11887712 11888005 -187742145 - AluJb SINE Alu -15 297 4 3775 65 0 7 chr5 11888015 11888479 -187741671 - L1PA13 LINE L1 0 6163 5703 317 302 42 0 chr5 11888481 11888577 -187741573 + MIR SINE MIR 88 187 -75 559 289 97 30 chr5 11888985 11889283 -187740867 + MLT1J1 LTR MaLR 125 442 -4 239 206 14 68 chr5 11889302 11889375 -187740775 + L2 LINE L2 3243 3311 -2 1557 180 170 41 chr5 11890688 11891100 -187739050 + MLT1C LTR MaLR 1 465 -2 2184 134 33 25 chr5 11891107 11891466 -187738684 - MLT1A1 LTR MaLR 0 365 4 385 178 68 0 chr5 11893794 11893867 -187736283 - MIR SINE MIR -106 156 79 30 45 0 0 chr5 11894596 11894640 -187735510 + AT_rich Low_complexity Low_complexity 1 44 0 981 184 6 0 chr5 11895325 11895488 -187734662 + MLT1A1 LTR MaLR 202 365 0 752 195 83 6 chr5 11896783 11896952 -187733198 - LTR40a LTR ERVL -314 205 24 252 276 233 0 chr5 11896972 11897088 -187733062 + HAL1 LINE L1 1504 1646 -861 1945 114 60 4 chr5 11897130 11897411 -187732739 + AluSx SINE Alu 1 297 -15 887 290 136 45 chr5 11898847 11899581 -187730569 + HAL1 LINE L1 4 804 -1703 2364 86 0 0 chr5 11899850 11900141 -187730009 + AluSg SINE Alu 2 292 -18 1218 122 87 0 chr5 11900261 11900457 -187729693 + L1MA1 LINE L1 6090 6302 0 326 254 66 8 chr5 11900625 11900747 -187729403 + HAL1 LINE L1 2030 2158 -349 619 200 38 79 chr5 11900852 11901092 -187729058 + HAL1 LINE L1 2191 2420 -87 31000 117 18 56 chr5 11901309 11907692 -187722458 + L1PA7 LINE L1 12 6148 -6 394 306 91 30 chr5 11907706 11907971 -187722179 + L1MDa LINE L1 2335 2615 -3925 2480 78 10 0 chr5 11908172 11908479 -187721671 - AluSq SINE Alu 0 313 4 1703 120 12 0 chr5 11908579 11908821 -187721329 - AluSq SINE Alu -59 254 10 5769 136 23 24 chr5 11908919 11909047 -187721103 + L1PA16 LINE L1 4873 5000 -1166 2052 127 3 0 chr5 11909047 11909356 -187720794 + AluSx SINE Alu 1 310 0 5769 136 23 24 chr5 11909356 11909372 -187720778 + L1PA16 LINE L1 5000 5015 -1151 1975 166 0 0 chr5 11909372 11909673 -187720477 + AluJb SINE Alu 1 301 -11 5769 136 23 24 chr5 11909673 11910818 -187719332 + L1PA16 LINE L1 5015 6157 -9 707 185 57 13 chr5 11911208 11911376 -187718774 - MER39 LTR ERV1 0 707 364 2636 119 8 99 chr5 11911401 11911898 -187718252 + LTR12 LTR ERV1 27 478 -236 845 194 58 51 chr5 11911898 11912344 -187717806 - MER39 LTR ERV1 -157 550 1 1897 136 51 0 chr5 11912366 11912661 -187717489 + AluSg SINE Alu 1 310 0 417 310 158 10 chr5 11912669 11912872 -187717278 + MIR SINE MIR 29 261 -1 1494 178 69 7 chr5 11913232 11913508 -187716642 + AluJo SINE Alu 1 293 -19 21 0 0 56 chr5 11913901 11913918 -187716232 + AT_rich Low_complexity Low_complexity 1 17 -17 1486 41 0 0 chr5 11913918 11914089 -187716061 + AluY SINE Alu 123 293 -18 21 0 0 56 chr5 11914089 11914107 -187716043 + AT_rich Low_complexity Low_complexity 17 34 0 1217 75 6 13 chr5 11914606 11914765 -187715385 + AluY SINE Alu 1 158 -153 443 328 63 25 chr5 11914934 11915008 -187715142 + L1MC4a LINE L1 5632 5702 -2106 2030 116 34 3 chr5 11915008 11915300 -187714850 + AluSx SINE Alu 1 301 -11 443 328 63 25 chr5 11915300 11915509 -187714641 + L1MC4a LINE L1 5702 5926 -1882 23 54 0 0 chr5 11916438 11916475 -187713675 + AT_rich Low_complexity Low_complexity 1 37 0 241 203 0 87 chr5 11916664 11916733 -187713417 + MLT1K LTR MaLR 492 554 -34 1795 169 36 109 chr5 11917010 11917094 -187713056 + MLT1C LTR MaLR 7 96 -371 1985 121 33 16 chr5 11917094 11917400 -187712750 + AluSx SINE Alu 2 312 0 1795 169 36 109 chr5 11917400 11917812 -187712338 + MLT1C LTR MaLR 96 467 0 360 0 0 0 chr5 11918319 11918359 -187711791 + (CA)n Simple_repeat Simple_repeat 1 40 0 1360 263 43 17 chr5 11919089 11919439 -187710711 - MLT1I LTR MaLR -3 406 48 1728 159 77 30 chr5 11919627 11919991 -187710159 - MLT1B LTR MaLR -2 388 8 2301 198 35 71 chr5 11920588 11921163 -187708987 + MLT2B3 LTR ERVL 1 554 0 2123 126 7 0 chr5 11921378 11921680 -187708470 + AluSx SINE Alu 7 310 -2 804 262 151 70 chr5 11922031 11922401 -187707749 - MLT1I LTR MaLR -8 401 2 1656 149 76 41 chr5 11923987 11924328 -187705822 - THE1C LTR MaLR -33 342 1 1768 120 19 0 chr5 11924400 11924659 -187705491 - AluSg1 SINE Alu -5 304 41 1052 233 165 16 chr5 11924858 11925472 -187704678 - LTR50 LTR ERVL -2 793 1 234 301 154 0 chr5 11925640 11925763 -187704387 + MIR3 SINE MIR 42 183 -25 21 0 0 0 chr5 11927297 11927318 -187702832 + AT_rich Low_complexity Low_complexity 1 21 0 206 279 0 0 chr5 11927671 11927714 -187702436 + L2 LINE L2 3268 3310 -3 1605 230 25 42 chr5 11927991 11928465 -187701685 + L1 LINE L1 3526 3991 -2155 1099 217 156 44 chr5 11928469 11928640 -187701510 + L1 LINE L1 4098 4248 -1898 1582 194 14 17 chr5 11928640 11928934 -187701216 + AluJb SINE Alu 6 298 -14 1099 217 156 44 chr5 11928934 11929172 -187700978 + L1 LINE L1 4248 4553 -1593 240 35 0 0 chr5 11929476 11929505 -187700645 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1299 208 21 4 chr5 11929507 11929747 -187700403 - AluJo SINE Alu -30 282 39 2140 83 79 0 chr5 11930815 11931105 -187699045 + AluSp SINE Alu 1 313 0 891 313 50 37 chr5 11931527 11932183 -187697967 - HAL1b LINE L1 -539 809 145 278 248 9 0 chr5 11932235 11932344 -187697806 + CT-rich Low_complexity Low_complexity 1 110 0 5331 221 37 50 chr5 11932506 11933274 -187696876 + L1MC/D LINE L1 3519 4296 -1850 1483 131 5 5 chr5 11933274 11933488 -187696662 + AluSg/x SINE Alu 84 297 -13 5331 221 37 50 chr5 11933488 11934433 -187695717 + L1MC/D LINE L1 4296 5209 -937 770 153 0 96 chr5 11934434 11934591 -187695559 + FLAM_C SINE Alu 2 143 0 1217 213 20 16 chr5 11934593 11934639 -187695511 + L1MC/D LINE L1 5198 5242 -1087 2170 102 0 39 chr5 11934639 11934944 -187695206 + AluSx SINE Alu 1 293 -19 1217 213 20 16 chr5 11934944 11935275 -187694875 + L1MC/D LINE L1 5242 5583 -746 2084 138 38 30 chr5 11935323 11935692 -187694458 + THE1C LTR MaLR 4 375 0 2105 210 56 150 chr5 11935692 11936220 -187693930 + L1ME1 LINE L1 5364 5922 -242 480 101 0 0 chr5 11936220 11936289 -187693861 + Alu SINE Alu 241 309 -1 2105 210 56 150 chr5 11936289 11936506 -187693644 + L1ME1 LINE L1 5922 6158 -6 2046 143 0 0 chr5 11937397 11937691 -187692459 + AluSx SINE Alu 1 294 -18 566 335 109 65 chr5 11938111 11938188 -187691962 + L3 LINE CR1 472 544 -1033 1550 147 45 54 chr5 11938188 11938501 -187691649 + AluJb SINE Alu 3 312 0 566 335 109 65 chr5 11938501 11939277 -187690873 + L3 LINE CR1 544 1377 -200 1799 136 24 21 chr5 11939277 11939564 -187690586 + AluJb SINE Alu 22 309 -3 566 335 109 65 chr5 11939564 11939695 -187690455 + L3 LINE CR1 1377 1501 -76 22 0 0 0 chr5 11940500 11940522 -187689628 + AT_rich Low_complexity Low_complexity 1 22 0 2411 99 0 0 chr5 11940618 11940930 -187689220 - AluSx SINE Alu 0 312 1 720 138 0 18 chr5 11941827 11941936 -187688214 + MLT1B LTR MaLR 2 108 -282 2297 110 0 7 chr5 11941939 11942249 -187687901 + AluSx SINE Alu 1 308 -4 221 167 50 0 chr5 11942250 11942310 -187687840 + (TATAA)n Simple_repeat Simple_repeat 5 67 0 565 255 66 14 chr5 11944102 11944314 -187685836 - L3 LINE CR1 -72 1505 1283 229 299 13 0 chr5 11944594 11944671 -187685479 - L3 LINE CR1 -353 1224 1147 1151 252 74 24 chr5 11945565 11945986 -187684164 - MLT1L LTR MaLR -8 607 166 311 317 84 12 chr5 11946878 11947045 -187683105 - L3 LINE CR1 -769 808 630 2278 92 63 20 chr5 11947281 11947630 -187682520 - THE1B LTR MaLR 0 364 1 12103 77 12 3 chr5 11947630 11949182 -187680968 - THE1B-int LTR MaLR 0 1580 15 1756 128 176 10 chr5 11949182 11949494 -187680656 - THE1B LTR MaLR 0 364 1 405 253 153 0 chr5 11949844 11950014 -187680136 + L2 LINE L2 3118 3313 0 202 225 0 0 chr5 11950588 11950628 -187679522 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 932 96 0 8 chr5 11951746 11951871 -187678279 - FLAM_C SINE Alu -19 124 1 430 196 112 28 chr5 11951871 11952014 -187678136 + MER104 DNA Tc2 26 180 0 452 154 13 0 chr5 11952333 11952411 -187677739 - L1MC4 LINE L1 -4 8038 7960 1128 180 234 0 chr5 11952417 11952656 -187677494 - AluJb SINE Alu -17 295 1 2911 257 98 22 chr5 11952658 11953769 -187676381 - L1MC4 LINE L1 -76 7966 6771 286 285 168 0 chr5 11954460 11954836 -187675314 + L2 LINE L2 1986 2424 -890 234 158 0 0 chr5 11954845 11954883 -187675267 + tRNA-Leu-TTG tRNA tRNA 3 40 -46 356 271 191 11 chr5 11954895 11955168 -187674982 + L2 LINE L2 2415 2736 -578 313 256 120 0 chr5 11955442 11955559 -187674591 + L2 LINE L2 3182 3312 -1 1829 166 3 7 chr5 11955647 11955949 -187674201 + AluJo SINE Alu 1 301 -11 300 185 84 34 chr5 11956048 11956167 -187673983 - L2 LINE L2 0 3272 3148 2145 136 0 0 chr5 11957772 11958067 -187672083 + AluSx SINE Alu 1 295 -17 2253 105 52 47 chr5 11961114 11961476 -187668674 + THE1B LTR MaLR 1 364 0 2394 92 0 0 chr5 11961476 11961770 -187668380 - AluSg SINE Alu -16 294 1 1048 209 39 9 chr5 11961772 11962002 -187668148 + L1MB3 LINE L1 5940 6176 -7 28 0 0 0 chr5 11962009 11962037 -187668113 + AT_rich Low_complexity Low_complexity 1 28 0 2512 58 0 26 chr5 11963670 11963983 -187666167 + AluY SINE Alu 1 305 -6 527 244 142 20 chr5 11964166 11964363 -187665787 + MIR SINE MIR 3 223 -39 957 189 124 57 chr5 11964372 11964439 -187665711 - MLT1D LTR MaLR -2 503 442 2353 94 3 3 chr5 11964439 11964747 -187665403 + AluSp SINE Alu 1 308 -5 957 189 124 57 chr5 11964747 11965095 -187665055 - MLT1D LTR MaLR -63 442 1 15241 118 30 33 chr5 11965462 11966928 -187663222 - Tigger1 DNA MER2_type 0 2418 949 2314 92 24 0 chr5 11966928 11967223 -187662927 + AluSg SINE Alu 1 302 -8 15241 118 30 33 chr5 11967223 11968140 -187662010 - Tigger1 DNA MER2_type -1469 949 40 679 204 0 23 chr5 11968140 11968272 -187661878 + FLAM_A SINE Alu 4 132 -1 15241 118 30 33 chr5 11968272 11968311 -187661839 - Tigger1 DNA MER2_type -2378 40 2 2030 142 13 7 chr5 11968354 11968656 -187661494 + AluJo SINE Alu 1 304 -8 2365 106 0 3 chr5 11968865 11969177 -187660973 + AluY SINE Alu 1 311 0 1891 165 3 3 chr5 11969191 11969488 -187660662 + AluJb SINE Alu 1 297 -15 1812 178 31 43 chr5 11969634 11969874 -187660276 - L1MB8 LINE L1 -1 6177 5943 2029 117 3 43 chr5 11969874 11970198 -187659952 + AluSx SINE Alu 1 311 -1 1812 178 31 43 chr5 11970198 11970378 -187659772 - L1MB8 LINE L1 -235 5943 5762 1678 147 4 19 chr5 11971076 11971334 -187658816 - AluJo SINE Alu -25 287 34 854 120 15 0 chr5 11972278 11972411 -187657739 - FRAM SINE Alu -24 152 18 1685 117 58 21 chr5 11972709 11973000 -187657150 + AluSx SINE Alu 2 303 -9 189 200 40 0 chr5 11973032 11973082 -187657068 + MIR SINE MIR 67 118 -144 510 239 28 34 chr5 11973132 11973308 -187656842 - MIR SINE MIR -70 192 18 252 0 0 0 chr5 11973615 11973643 -187656507 + (A)n Simple_repeat Simple_repeat 1 28 0 201 290 32 0 chr5 11974789 11974851 -187655299 - L2 LINE L2 -345 2968 2905 284 185 19 0 chr5 11975786 11975840 -187654310 - MER20 DNA MER1_type -6 213 159 1303 94 11 11 chr5 11976159 11976340 -187653810 + AluSg/x SINE Alu 118 298 -12 24 0 0 0 chr5 11976630 11976654 -187653496 + AT_rich Low_complexity Low_complexity 1 24 0 1954 118 10 20 chr5 11976752 11977049 -187653101 + AluSx SINE Alu 1 294 -18 658 152 27 0 chr5 11977129 11977241 -187652909 - FLAM_A SINE Alu -8 134 20 462 177 0 0 chr5 11977396 11977475 -187652675 - MER2 DNA MER2_type -266 79 1 252 167 0 0 chr5 11977476 11977518 -187652632 - MER2 DNA MER2_type -303 42 1 193 278 133 0 chr5 11977561 11977651 -187652499 + MIR SINE MIR 113 214 -48 820 244 173 24 chr5 11978632 11979042 -187651108 + L1MC4 LINE L1 7483 7953 -89 321 188 24 71 chr5 11979162 11979247 -187650903 - L2 LINE L2 -4 3309 3229 363 224 0 0 chr5 11980146 11980204 -187649946 + AluJ/FLAM SINE Alu 1 58 -244 230 190 0 17 chr5 11980379 11980437 -187649713 + (TA)n Simple_repeat Simple_repeat 2 58 0 2098 117 0 0 chr5 11980910 11981191 -187648959 + AluSc SINE Alu 5 285 -24 189 0 0 0 chr5 11981195 11981216 -187648934 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1902 31 0 0 chr5 11981336 11981561 -187648589 - L1PA4 LINE L1 -1 6154 5930 228 100 0 0 chr5 11981685 11981725 -187648425 + (TTTTTG)n Simple_repeat Simple_repeat 5 44 0 234 0 0 0 chr5 11982470 11982496 -187647654 + (CA)n Simple_repeat Simple_repeat 2 27 0 775 201 24 6 chr5 11983366 11983530 -187646620 + FRAM SINE Alu 2 168 -8 2620 115 5 3 chr5 11983590 11983974 -187646176 - L1PA10 LINE L1 -15 6153 5769 655 240 84 24 chr5 11983983 11984213 -187645937 - L1MC4 LINE L1 -1020 7022 6689 2527 39 0 36 chr5 11984905 11985240 -187644910 - L1PA3 LINE L1 0 6155 5833 6793 62 26 2 chr5 11985400 11987024 -187643126 + L1PA8 LINE L1 4509 6166 -6 203 273 18 18 chr5 11987115 11987170 -187642980 + L2 LINE L2 3259 3313 0 407 169 0 0 chr5 11987395 11987460 -187642690 + MER89 LTR ERV1 7 71 -488 1581 223 29 14 chr5 11987464 11987818 -187642332 + MER89 LTR ERV1 181 539 -20 743 216 30 10 chr5 11987820 11988019 -187642131 + MLT1A1 LTR MaLR 1 203 -162 810 315 108 11 chr5 11988398 11988517 -187641633 - L2 LINE L2 -4 3309 3203 2520 197 14 18 chr5 11988517 11989024 -187641126 + MLT1D LTR MaLR 1 505 0 810 315 108 11 chr5 11989024 11989358 -187640792 - L2 LINE L2 -110 3203 2812 447 302 17 22 chr5 11989367 11989546 -187640604 - MER5B DNA MER1_type 0 178 1 403 338 45 13 chr5 11989546 11989573 -187640577 - L2 LINE L2 -503 2811 2787 198 0 0 0 chr5 11989573 11989595 -187640555 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 403 338 45 13 chr5 11989595 11989710 -187640440 - L2 LINE L2 -527 2787 2664 365 304 98 47 chr5 11989711 11989925 -187640225 - L2 LINE L2 -1098 2216 1992 956 309 53 25 chr5 11989953 11990351 -187639799 - LTR16A LTR ERVL -7 443 35 226 207 0 107 chr5 11990914 11991064 -187639086 + A-rich Low_complexity Low_complexity 3 136 0 2972 271 96 26 chr5 11991225 11993694 -187636456 + L1MC/D LINE L1 2675 5361 -881 234 0 0 0 chr5 11993694 11993720 -187636430 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2972 271 96 26 chr5 11993720 11993987 -187636163 + L1MC/D LINE L1 5361 5608 -634 1645 180 9 27 chr5 11994150 11994483 -187635667 - L1 LINE L1 -1977 4169 3843 1831 128 3 48 chr5 11994859 11995149 -187635001 - AluSx SINE Alu -35 277 1 24 67 0 0 chr5 11995197 11995242 -187634908 + AT_rich Low_complexity Low_complexity 1 45 0 10475 173 17 10 chr5 11995525 11997603 -187632547 + L1P LINE L1 1550 3642 -2504 3106 161 15 22 chr5 11997703 11998299 -187631851 + MER39B LTR ERV1 57 648 -5 449 325 65 50 chr5 11998948 11999220 -187630930 + MLT1K LTR MaLR 7 286 -302 1962 154 103 10 chr5 11999220 11999610 -187630540 + MSTA LTR MaLR 1 426 -2 449 325 65 50 chr5 11999610 11999660 -187630490 + MLT1K LTR MaLR 286 334 -254 401 330 135 0 chr5 11999716 11999903 -187630247 - MIR SINE MIR -13 249 40 648 319 63 77 chr5 12000226 12001002 -187629148 + L2 LINE L2 2399 3185 -128 750 82 0 0 chr5 12001397 12001494 -187628656 + L1PA10 LINE L1 6056 6152 -16 633 178 0 0 chr5 12001568 12001675 -187628475 + 7SLRNA srpRNA srpRNA 213 319 -1 21 36 0 0 chr5 12001749 12001777 -187628373 + AT_rich Low_complexity Low_complexity 1 28 0 362 301 44 56 chr5 12002928 12003159 -187626991 - MIR SINE MIR 0 262 36 1779 208 208 4 chr5 12003662 12004129 -187626021 - MLT1F1 LTR MaLR -1 566 5 346 333 23 34 chr5 12004793 12004970 -187625180 + HAL1 LINE L1 1116 1290 -1217 613 332 76 4 chr5 12005353 12005591 -187624559 + MIR SINE MIR 8 262 0 1142 145 6 0 chr5 12006595 12006767 -187623383 - LTR8 LTR ERV1 -9 682 510 7509 34 6 7 chr5 12006770 12008421 -187621729 - L1PA3 LINE L1 -3 6152 4505 8443 163 7 7 chr5 12008567 12009260 -187620890 + L1PA11 LINE L1 3644 4336 -1838 2826 7 0 0 chr5 12009260 12009566 -187620584 + AluY SINE Alu 1 306 -5 8443 163 7 7 chr5 12009566 12011415 -187618735 + L1PA11 LINE L1 4335 6172 -2 228 100 0 0 chr5 12013081 12013121 -187617029 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 40 0 0 chr5 12013120 12013145 -187617005 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 3357 197 65 17 chr5 12013775 12014558 -187615592 + L1MB8 LINE L1 5352 6172 -6 217 354 42 0 chr5 12014816 12014912 -187615238 + L2 LINE L2 3173 3272 0 234 91 0 0 chr5 12016122 12016155 -187613995 + (TG)n Simple_repeat Simple_repeat 1 33 0 22 35 0 0 chr5 12016494 12016523 -187613627 + AT_rich Low_complexity Low_complexity 1 29 0 605 164 98 0 chr5 12017617 12017739 -187612411 - L1MB8 LINE L1 -5 6173 6040 472 161 120 16 chr5 12017834 12018026 -187612124 - L1MB8 LINE L1 -170 6008 5797 799 188 56 64 chr5 12018625 12018859 -187611291 - MER96B DNA MER1_type? -185 232 1 814 154 19 0 chr5 12019402 12019564 -187610586 + (TAGA)n Simple_repeat Simple_repeat 4 168 0 193 303 43 99 chr5 12020343 12020505 -187609645 + L2 LINE L2 3115 3267 -5 4862 91 1 41 chr5 12020742 12021523 -187608627 + L1P LINE L1 2 751 -5395 233 219 62 0 chr5 12022309 12022373 -187607777 + L3 LINE CR1 792 859 -718 355 289 243 14 chr5 12022541 12022759 -187607391 + L3 LINE CR1 967 1234 -343 2131 49 0 0 chr5 12022817 12023063 -187607087 + AluY SINE Alu 55 300 -11 315 313 23 47 chr5 12023068 12023196 -187606954 + L3 LINE CR1 1383 1507 -70 7423 101 7 19 chr5 12024320 12025405 -187604745 + MER11C LTR ERVK 1 1071 0 254 302 16 0 chr5 12025477 12025540 -187604610 - MIR SINE MIR -104 104 41 954 187 34 10 chr5 12026622 12026831 -187603319 + MER61C LTR ERV1 216 429 -5 279 0 0 0 chr5 12026871 12026902 -187603248 + (CA)n Simple_repeat Simple_repeat 1 31 0 202 281 52 118 chr5 12027503 12027638 -187602512 - MIR3 SINE MIR -45 163 38 2256 105 13 7 chr5 12027774 12028079 -187602071 + AluSg SINE Alu 3 309 -1 326 315 124 41 chr5 12028372 12028639 -187601511 + L2 LINE L2 2929 3217 -96 620 334 128 17 chr5 12028711 12028928 -187601222 - L2 LINE L2 -25 3288 3097 1633 182 0 47 chr5 12028928 12029246 -187600904 + AluJo SINE Alu 1 303 -9 620 334 128 17 chr5 12029246 12029664 -187600486 - L2 LINE L2 -216 3097 2591 295 138 313 25 chr5 12029668 12029748 -187600402 + MER51A LTR ERV1 1 103 -531 * 2280 111 2 34 chr5 12029742 12030089 -187600061 + MER51B LTR ERV1 50 377 0 262 291 0 0 chr5 12030098 12030177 -187599973 - L2 LINE L2 -741 2573 2495 244 184 13 92 chr5 12030185 12030261 -187599889 - L1MA10 LINE L1 -552 5782 5713 2395 158 59 20 chr5 12030262 12030768 -187599382 + L1MA10 LINE L1 5806 6331 -3 1377 303 141 11 chr5 12030819 12031555 -187598595 - L2 LINE L2 -865 2449 1618 2647 124 11 49 chr5 12031770 12032215 -187597935 - MSTA LTR MaLR 0 428 1 1872 134 16 26 chr5 12035081 12035387 -187594763 + AluJb SINE Alu 3 305 -7 2128 92 0 3 chr5 12035579 12035883 -187594267 - AluY SINE Alu -8 303 1 20686 32 13 0 chr5 12036178 12039931 -187590219 - L1P LINE L1 -733 5422 1630 572 106 0 62 chr5 12039931 12040044 -187590106 - LTR8 LTR ERV1 -176 515 410 * 887 138 0 22 chr5 12040038 12040176 -187589974 - LTR8 LTR ERV1 -556 135 1 359 129 38 53 chr5 12040370 12040493 -187589657 + MER61B LTR ERV1 2 216 -209 420 141 94 0 chr5 12040610 12040695 -187589455 + LTR49 LTR ERV1 154 246 -349 458 181 96 50 chr5 12040713 12040945 -187589205 + LTR48 LTR ERV1 300 739 -48 1205 167 5 33 chr5 12041659 12041788 -187588362 + MER3 DNA MER1_type 1 123 -86 1884 115 0 0 chr5 12041788 12042032 -187588118 - AluSg SINE Alu -15 295 52 1205 167 5 33 chr5 12042032 12042117 -187588033 + MER3 DNA MER1_type 123 209 0 586 193 56 43 chr5 12042468 12042629 -187587521 + LTR23 LTR ERV1 275 437 0 333 0 0 0 chr5 12043921 12043958 -187586192 + (CA)n Simple_repeat Simple_repeat 2 38 0 288 0 0 0 chr5 12046475 12046507 -187583643 + (GA)n Simple_repeat Simple_repeat 2 33 0 1342 177 27 10 chr5 12046776 12047193 -187582957 - LTR54 LTR ERV1 0 510 1 3835 206 26 30 chr5 12047640 12049070 -187581080 + L1MA9 LINE L1 4361 5788 -524 241 191 16 48 chr5 12049093 12049156 -187580994 - L1M2 LINE L1 -512 5788 5728 2311 196 46 24 chr5 12049180 12049477 -187580673 + L1MA9 LINE L1 5776 6091 -221 1975 81 0 8 chr5 12049477 12049775 -187580375 - AluY SINE Alu 0 333 38 2311 196 46 24 chr5 12049775 12049977 -187580173 + L1MA9 LINE L1 6091 6287 -25 697 295 33 26 chr5 12050011 12050282 -187579868 + MLT1K LTR MaLR 307 579 -9 331 241 35 23 chr5 12051893 12051980 -187578170 - L2 LINE L2 -16 3297 3210 354 236 50 36 chr5 12052028 12052168 -187577982 + L1MC4 LINE L1 7900 8041 -1 2481 46 19 10 chr5 12052482 12052789 -187577361 + AluY SINE Alu 1 310 -1 207 0 0 0 chr5 12052881 12052904 -187577246 + (A)n Simple_repeat Simple_repeat 1 23 0 279 0 0 0 chr5 12053326 12053357 -187576793 + (TTA)n Simple_repeat Simple_repeat 3 33 0 306 30 0 0 chr5 12053357 12053390 -187576760 - L1PA6 LINE L1 -18 6136 6104 1457 229 66 92 chr5 12054286 12054850 -187575300 - MLT1E2 LTR MaLR -2 624 76 302 281 118 30 chr5 12054757 12054892 -187575258 - MLT2C1 LTR ERVL -199 198 52 * 225 154 0 0 chr5 12055188 12055227 -187574923 + (TA)n Simple_repeat Simple_repeat 1 39 0 2227 115 0 16 chr5 12055227 12055540 -187574610 - AluSx SINE Alu -4 308 1 497 273 32 7 chr5 12055984 12056138 -187574012 + LTR67 LTR ERVL 400 557 0 1441 179 3 102 chr5 12056496 12056820 -187573330 + AluJo SINE Alu 1 292 -20 1301 136 19 0 chr5 12056934 12057148 -187573002 + L1MA4 LINE L1 6077 6294 -6 297 0 0 0 chr5 12057351 12057384 -187572766 + (TG)n Simple_repeat Simple_repeat 1 33 0 1832 132 13 55 chr5 12057615 12057926 -187572224 - AluSq SINE Alu -14 299 2 2308 100 3 0 chr5 12057939 12058240 -187571910 - AluSc SINE Alu -7 302 1 2065 136 3 7 chr5 12058268 12058578 -187571572 - AluSg1 SINE Alu 0 309 1 235 311 41 33 chr5 12058657 12058779 -187571371 + LTR67 LTR ERVL 421 543 -14 376 295 54 27 chr5 12060355 12060504 -187569646 - MIR SINE MIR -97 165 13 2228 105 0 10 chr5 12061483 12061778 -187568372 + AluSg SINE Alu 3 294 -16 2375 75 0 31 chr5 12061780 12062101 -187568049 + AluY SINE Alu 1 311 0 369 0 0 0 chr5 12062111 12062152 -187567998 + (TG)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr5 12062151 12062175 -187567975 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 601 264 37 12 chr5 12062550 12062713 -187567437 - MER5A DNA MER1_type -7 182 16 317 167 56 158 chr5 12062765 12062980 -187567170 + L1M4 LINE L1 4969 5161 -985 1900 109 21 0 chr5 12062981 12063264 -187566886 - AluSq SINE Alu -15 298 10 561 193 82 7 chr5 12063565 12063700 -187566450 - Charlie4 DNA MER1_type -1812 149 5 1950 131 25 0 chr5 12064468 12064750 -187565400 + AluY SINE Alu 1 289 -22 21 36 0 0 chr5 12067063 12067091 -187563059 + AT_rich Low_complexity Low_complexity 1 28 0 1952 115 39 11 chr5 12068178 12068464 -187561686 + AluSq SINE Alu 1 294 -19 331 252 142 45 chr5 12069815 12069970 -187560180 - MIR SINE MIR -87 175 6 1361 167 123 0 chr5 12070793 12071069 -187559081 + MER2 DNA MER2_type 10 319 -26 765 222 81 0 chr5 12071475 12071660 -187558490 + Charlie1a DNA MER1_type 5 204 -1251 1615 168 28 7 chr5 12071686 12071971 -187558179 + AluJo SINE Alu 1 291 -21 1133 154 254 7 chr5 12071972 12072251 -187557899 + Charlie1a DNA MER1_type 739 1086 -369 1357 168 16 29 chr5 12072266 12072510 -187557640 + AluJo SINE Alu 1 241 -71 3801 135 49 25 chr5 12072511 12072652 -187557498 - MER50 LTR ERV1 -23 711 575 2283 101 0 7 chr5 12072652 12072960 -187557190 + AluSx SINE Alu 1 306 -6 3801 135 49 25 chr5 12072960 12073512 -187556638 - MER50 LTR ERV1 -159 575 1 412 138 0 0 chr5 12073512 12073570 -187556580 + AluJo SINE Alu 238 295 -17 1674 226 96 35 chr5 12073857 12074088 -187556062 + MLT1E2 LTR MaLR 1 216 -410 1947 131 30 0 chr5 12074088 12074386 -187555764 + AluSx SINE Alu 1 307 -5 1674 226 96 35 chr5 12074386 12074742 -187555408 + MLT1E2 LTR MaLR 216 619 -7 321 342 45 42 chr5 12074891 12074963 -187555187 + MLT1I LTR MaLR 44 114 -295 3300 122 75 62 chr5 12074963 12075432 -187554718 + MER39B LTR ERV1 5 486 -167 1717 153 30 0 chr5 12075432 12075700 -187554450 + AluJo SINE Alu 12 287 -25 3300 122 75 62 chr5 12075700 12075870 -187554280 + MER39B LTR ERV1 486 652 -1 321 342 45 42 chr5 12075870 12076110 -187554040 + MLT1I LTR MaLR 114 357 -52 1737 176 0 31 chr5 12076211 12076529 -187553621 + AluJb SINE Alu 1 308 -4 1412 171 89 0 chr5 12077003 12077261 -187552889 - MER50 LTR ERV1 -23 711 431 661 80 23 0 chr5 12077272 12077360 -187552790 - THE1C LTR MaLR -285 90 1 1725 123 31 0 chr5 12077704 12077964 -187552186 - MER50 LTR ERV1 -466 268 1 275 238 60 24 chr5 12078557 12078641 -187551509 + MLT1L LTR MaLR 527 613 -2 2944 101 0 5 chr5 12078827 12079204 -187550946 - THE1C LTR MaLR 0 375 1 954 216 96 96 chr5 12079736 12080204 -187549946 - LTR34 LTR ERV1 -4 695 136 425 180 72 18 chr5 12080282 12080393 -187549757 - MER4A LTR ERV1 -547 117 1 353 261 45 9 chr5 12080495 12080606 -187549544 + Charlie5 DNA MER1_type 34 148 -2464 2256 99 10 0 chr5 12080608 12080910 -187549240 + AluSx SINE Alu 1 305 -7 2382 185 57 41 chr5 12080916 12081269 -187548881 + Charlie5 DNA MER1_type 1975 2344 -280 2163 126 10 0 chr5 12081269 12081571 -187548579 - AluSx SINE Alu -7 305 1 2382 185 57 41 chr5 12081571 12081827 -187548323 + Charlie5 DNA MER1_type 2344 2594 -30 223 217 0 0 chr5 12082311 12082357 -187547793 - MIR SINE MIR -115 147 102 4795 161 48 9 chr5 12082361 12083223 -187546927 - MER54A LTR ERVL -6 895 1 2366 85 7 0 chr5 12083723 12084018 -187546132 - AluSx SINE Alu -15 297 1 1979 146 0 10 chr5 12084092 12084417 -187545733 - AluSx SINE Alu 0 312 1 2155 116 0 0 chr5 12084956 12085250 -187544900 - AluSx SINE Alu -18 294 1 1684 180 3 10 chr5 12085399 12085694 -187544456 - AluJo SINE Alu -19 293 1 2288 96 0 0 chr5 12086054 12086347 -187543803 + AluSx SINE Alu 1 293 -19 1901 152 13 3 chr5 12086677 12086980 -187543170 + AluJb SINE Alu 1 306 -6 2333 84 0 7 chr5 12086988 12087285 -187542865 + AluSg SINE Alu 3 297 -13 1859 113 55 4 chr5 12087672 12087946 -187542204 + AluSx SINE Alu 1 288 -24 2291 144 34 3 chr5 12088606 12088961 -187541189 + MER47A DNA MER2_type 1 366 0 1745 169 3 13 chr5 12089165 12089347 -187540803 - AluJo SINE Alu -1 311 132 2224 103 7 0 chr5 12089347 12089643 -187540507 - AluSg SINE Alu -12 298 6 1745 169 3 13 chr5 12089643 12089774 -187540376 - AluJo SINE Alu -180 132 1 2102 125 0 3 chr5 12089862 12090167 -187539983 - AluJb SINE Alu 0 312 9 246 232 295 11 chr5 12090247 12090342 -187539808 - MIR SINE MIR -55 153 32 1380 283 66 15 chr5 12091338 12091739 -187538411 + L1PB3 LINE L1 5663 6080 -74 40 17 0 17 chr5 12091851 12091881 -187538269 + AT_rich Low_complexity Low_complexity 1 31 -26 1813 107 3 75 chr5 12091881 12092200 -187537950 - AluSx SINE Alu -16 296 1 40 17 0 17 chr5 12092200 12092227 -187537923 + AT_rich Low_complexity Low_complexity 31 57 0 1412 58 48 19 chr5 12092235 12092443 -187537707 + AluSq SINE Alu 79 292 -21 377 281 57 62 chr5 12093355 12093565 -187536585 + MIR SINE MIR 11 219 -43 328 324 14 28 chr5 12093660 12093805 -187536345 + MIR SINE MIR 85 227 -35 2614 23 3 0 chr5 12095174 12095484 -187534666 + AluY SINE Alu 1 311 0 356 306 113 18 chr5 12095498 12095727 -187534423 + L1MEd LINE L1 508 758 -5361 489 174 12 0 chr5 12095856 12095942 -187534208 - HY1 scRNA scRNA -25 87 1 1370 183 36 36 chr5 12096002 12096303 -187533847 - AluJb SINE Alu -9 303 3 2252 89 7 3 chr5 12096336 12096639 -187533511 + AluSq SINE Alu 1 304 -9 488 256 84 59 chr5 12096811 12097014 -187533136 + L1MEd LINE L1 2878 3085 -3044 1743 203 15 3 chr5 12097014 12097339 -187532811 - MLT1A1 LTR MaLR -1 364 36 287 248 176 0 chr5 12097360 12097513 -187532637 + L1M4 LINE L1 4664 4843 -1303 2035 262 85 19 chr5 12097515 12098085 -187532065 - L2 LINE L2 0 3313 2782 1603 166 49 11 chr5 12098085 12098369 -187531781 + AluJo SINE Alu 1 295 -17 2035 262 85 19 chr5 12098369 12098814 -187531336 - L2 LINE L2 -531 2782 2227 233 235 0 141 chr5 12098823 12098878 -187531272 - MER82 DNA MER2_type 0 653 612 2230 97 0 3 chr5 12098878 12099177 -187530973 - AluSq SINE Alu -15 298 1 233 235 0 141 chr5 12099177 12099206 -187530944 - MER82 DNA MER2_type -41 612 581 1465 186 45 13 chr5 12099275 12099590 -187530560 + MLT1A1 LTR MaLR 1 431 -36 2061 204 37 19 chr5 12099610 12100042 -187530108 - MER82 DNA MER2_type -177 476 37 1672 118 0 0 chr5 12100080 12100318 -187529832 - AluSx SINE Alu -19 293 56 1346 262 105 62 chr5 12100348 12100718 -187529432 - L2 LINE L2 -1105 2209 1856 2057 148 0 0 chr5 12100718 12101029 -187529121 + AluSx SINE Alu 1 311 -1 1346 262 105 62 chr5 12101029 12101103 -187529047 - L2 LINE L2 -1458 1856 1787 2088 113 3 0 chr5 12101103 12101403 -187528747 + AluSq SINE Alu 1 301 -12 1346 262 105 62 chr5 12101403 12101805 -187528345 - L2 LINE L2 -1527 1787 1326 230 208 125 0 chr5 12101814 12101886 -187528264 - L2 LINE L2 -2099 1215 1135 406 225 26 89 chr5 12102227 12102418 -187527732 + L1MC5 LINE L1 7603 7781 -180 1060 88 0 0 chr5 12102424 12102561 -187527589 + AluSq/x SINE Alu 1 137 -175 915 123 43 49 chr5 12102683 12102846 -187527304 + AluJo SINE Alu 113 274 -38 290 88 62 12 chr5 12102849 12102929 -187527221 + (TTTA)n Simple_repeat Simple_repeat 1 84 0 354 184 116 5 chr5 12103472 12103637 -187526513 - MER21A LTR ERV1 -2 929 670 1641 77 4 17 chr5 12103641 12103875 -187526275 - AluSg/x SINE Alu 0 310 80 821 122 0 0 chr5 12104303 12104418 -187525732 + MER4D LTR ERV1 1 115 -788 1256 146 35 22 chr5 12104418 12104644 -187525506 + AluSx SINE Alu 1 229 -83 4345 148 31 37 chr5 12104668 12105474 -187524676 + MER4D LTR ERV1 103 903 0 323 270 27 20 chr5 12105485 12105633 -187524517 - LTR37A LTR ERV1 0 426 278 3405 169 50 72 chr5 12105659 12106131 -187524019 + MER72 LTR ERV1 15 467 -255 1586 166 0 30 chr5 12106131 12106426 -187523724 + AluJo SINE Alu 1 286 -26 3405 169 50 72 chr5 12106426 12106677 -187523473 + MER72 LTR ERV1 467 722 0 671 162 0 0 chr5 12106724 12106823 -187523327 + AluJ/FLAM SINE Alu 2 100 -212 428 190 229 45 chr5 12106838 12107017 -187523133 - LTR37A LTR ERV1 -207 219 8 2085 115 10 0 chr5 12107613 12107918 -187522232 - AluSx SINE Alu 0 312 5 528 168 84 8 chr5 12108020 12108151 -187521999 + LTR37A LTR ERV1 286 426 0 273 302 9 35 chr5 12108412 12108528 -187521622 + G-rich Low_complexity Low_complexity 3 115 0 444 259 5 53 chr5 12109904 12110093 -187520057 + GA-rich Low_complexity Low_complexity 1 180 0 873 163 7 13 chr5 12110244 12110440 -187519710 - FRAM SINE Alu 0 176 1 2179 105 0 22 chr5 12110445 12110760 -187519390 - AluSx SINE Alu -4 308 1 482 208 10 10 chr5 12110887 12110983 -187519167 - MLT2F LTR ERVL -567 96 1 1287 131 149 62 chr5 12111025 12111321 -187518829 + MLT1A1 LTR MaLR 1 332 -33 1957 121 0 0 chr5 12111321 12111637 -187518513 - AluSx SINE Alu 0 316 1 1287 131 149 62 chr5 12111637 12111675 -187518475 + MLT1A1 LTR MaLR 332 365 0 1079 134 31 76 chr5 12111880 12112103 -187518047 - AluJb SINE Alu -14 298 86 243 191 87 95 chr5 12112854 12112980 -187517170 - L1MC4 LINE L1 0 8042 7918 1110 261 105 51 chr5 12113033 12113158 -187516992 + MLT1F LTR MaLR 1 118 -424 2220 107 50 50 chr5 12113158 12113423 -187516727 - THE1B LTR MaLR 0 364 97 2125 112 0 3 chr5 12113423 12113719 -187516431 + AluSq SINE Alu 1 295 -18 2220 107 50 50 chr5 12113719 12113817 -187516333 - THE1B LTR MaLR -266 98 1 1110 261 105 51 chr5 12113817 12113893 -187516257 + MLT1F LTR MaLR 118 188 -354 201 108 0 0 chr5 12113893 12113930 -187516220 + (TG)n Simple_repeat Simple_repeat 2 38 0 1110 261 105 51 chr5 12113930 12114241 -187515909 + MLT1F LTR MaLR 188 542 0 293 248 147 8 chr5 12114253 12114382 -187515768 + MLT1F1-int LTR MaLR 4 150 -1221 840 200 36 0 chr5 12114390 12114555 -187515595 - FRAM SINE Alu -5 171 1 675 292 68 13 chr5 12114570 12114878 -187515272 + MLT1F1-int LTR MaLR 277 601 -770 287 125 0 0 chr5 12114878 12114918 -187515232 - MSTB LTR MaLR 0 428 389 1344 151 8 45 chr5 12114918 12115183 -187514967 + AluJo SINE Alu 1 255 -57 1309 179 12 4 chr5 12115192 12115438 -187514712 - AluJb SINE Alu -43 269 22 1005 136 29 73 chr5 12115446 12115652 -187514498 - MSTB LTR MaLR -229 197 1 341 341 121 0 chr5 12115891 12116064 -187514086 + MLT1F1-int LTR MaLR 692 885 -486 1566 142 0 73 chr5 12116094 12116396 -187513754 - AluJb SINE Alu -32 280 1 492 241 121 7 chr5 12116610 12116751 -187513399 + MLT1F1-int LTR MaLR 1215 1371 0 1377 211 87 30 chr5 12116855 12116894 -187513256 + MLT1F1 LTR MaLR 89 124 -443 2309 149 81 2 chr5 12116894 12117291 -187512859 + MSTC LTR MaLR 1 428 0 1377 211 87 30 chr5 12117291 12117675 -187512475 + MLT1F1 LTR MaLR 124 526 -41 1939 183 64 43 chr5 12117675 12117694 -187512456 + MER74A LTR ERVL 1 18 -540 2089 131 3 6 chr5 12117694 12118007 -187512143 - AluSx SINE Alu 0 312 1 1939 183 64 43 chr5 12118007 12118173 -187511977 + MER74A LTR ERVL 18 179 -379 1855 146 58 18 chr5 12118173 12118503 -187511647 - MER61A LTR ERV1 0 343 1 1939 183 64 43 chr5 12118503 12118754 -187511396 + MER74A LTR ERVL 179 447 -111 2287 82 0 25 chr5 12118755 12119074 -187511076 - AluSx SINE Alu 0 312 2 930 106 12 12 chr5 12119165 12119325 -187510825 + (TTCC)n Simple_repeat Simple_repeat 3 162 0 530 176 15 15 chr5 12119331 12119467 -187510683 + CT-rich Low_complexity Low_complexity 1 136 0 1747 134 12 73 chr5 12119584 12119912 -187510238 - MLT1B LTR MaLR -82 308 1 2301 72 3 0 chr5 12119992 12120285 -187509865 - AluSp SINE Alu -19 294 1 826 173 126 31 chr5 12120628 12121072 -187509078 - Charlie1 DNA MER1_type -1 2760 2186 3634 202 89 10 chr5 12121080 12122339 -187507811 + L1MB8 LINE L1 4810 6174 -4 772 181 7 34 chr5 12122337 12122486 -187507664 + L1ME LINE L1 5421 5565 -601 * 401 234 165 19 chr5 12122662 12122741 -187507409 - LTR41 LTR ERVL -592 181 115 180 0 0 0 chr5 12122741 12122761 -187507389 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 401 234 165 19 chr5 12122761 12122839 -187507311 - LTR41 LTR ERVL -658 115 1 2236 99 3 0 chr5 12123023 12123326 -187506824 - AluSq SINE Alu -9 304 1 232 244 58 35 chr5 12123328 12123414 -187506736 - LTR33A LTR ERVL -377 146 59 2110 76 32 0 chr5 12123517 12123815 -187506335 - AluSp SINE Alu 0 307 1 1616 146 84 0 chr5 12124171 12124446 -187505704 - AluSx SINE Alu -14 298 1 263 111 0 0 chr5 12124652 12124688 -187505462 + L1MC3 LINE L1 7238 7273 -512 481 95 0 0 chr5 12124692 12124755 -187505395 - LTR3b LTR ERVK 0 500 438 1894 172 49 51 chr5 12124755 12125185 -187504965 - LTR3 LTR ERVK 0 429 1 2184 160 113 15 chr5 12125185 12125215 -187504935 + L1MC3 LINE L1 7271 7297 -488 189 0 0 0 chr5 12125215 12125236 -187504914 + (ATATG)n Simple_repeat Simple_repeat 2 22 0 2184 160 113 15 chr5 12125236 12125667 -187504483 + L1MC3 LINE L1 7297 7777 -8 864 279 54 56 chr5 12126485 12126575 -187503575 - MLT1I LTR MaLR 0 409 320 1526 139 12 90 chr5 12126575 12126794 -187503356 + AluJo SINE Alu 1 189 -123 1762 135 30 20 chr5 12126794 12127097 -187503053 - AluSx SINE Alu -6 306 1 1526 139 12 90 chr5 12127097 12127200 -187502950 + AluJo SINE Alu 189 298 -14 864 279 54 56 chr5 12127200 12127517 -187502633 - MLT1I LTR MaLR -89 320 3 1789 198 72 54 chr5 12127712 12128269 -187501881 - L1ME1 LINE L1 -3 6163 5597 341 249 63 79 chr5 12128277 12128317 -187501833 - L1ME1 LINE L1 -2312 5473 5434 1789 155 3 10 chr5 12128317 12128626 -187501524 - AluJo SINE Alu -4 308 2 341 249 63 79 chr5 12128626 12128650 -187501500 - L1ME1 LINE L1 -2351 5434 5411 588 120 56 9 chr5 12128650 12128758 -187501392 - L1MB3 LINE L1 -4 6179 6067 341 249 63 79 chr5 12128758 12128881 -187501269 - L1ME1 LINE L1 -2374 5411 5288 229 189 0 38 chr5 12128931 12128984 -187501166 + L1M LINE L1 5310 5360 -804 242 280 220 38 chr5 12129432 12129564 -187500586 + MIR SINE MIR 82 237 -25 2192 99 74 42 chr5 12129564 12129917 -187500233 - THE1B LTR MaLR 0 364 1 709 252 52 0 chr5 12130088 12130243 -187499907 + AluJo SINE Alu 13 175 -137 874 202 97 11 chr5 12130861 12131128 -187499022 - Charlie1b DNA MER1_type -125 398 109 875 198 6 0 chr5 12131139 12131311 -187498839 + FRAM SINE Alu 1 173 -3 3071 155 18 26 chr5 12133201 12133809 -187496341 + pTR5 LTR ERV1 742 1344 -1094 4285 124 15 127 chr5 12133825 12134750 -187495400 + LTR12 LTR ERV1 5 826 0 793 231 61 47 chr5 12136445 12136657 -187493493 - MIR SINE MIR 0 262 48 642 177 56 90 chr5 12137364 12137630 -187492520 - L1MC5 LINE L1 -94 7867 7611 2317 63 0 20 chr5 12137687 12137986 -187492164 - AluY SINE Alu -17 294 2 24 0 0 0 chr5 12137990 12138014 -187492136 + AT_rich Low_complexity Low_complexity 1 24 0 713 188 0 0 chr5 12138014 12138131 -187492019 - FLAM_C SINE Alu -25 118 2 297 0 0 0 chr5 12138382 12138415 -187491735 + (TG)n Simple_repeat Simple_repeat 2 34 0 2100 117 0 3 chr5 12138866 12139165 -187490985 + AluSx SINE Alu 1 298 -14 240 232 14 14 chr5 12139615 12139684 -187490466 + CT-rich Low_complexity Low_complexity 1 69 0 1753 123 17 51 chr5 12139685 12139977 -187490173 - AluSx SINE Alu -30 282 1 834 193 76 0 chr5 12139977 12140148 -187490002 + MLT1F1 LTR MaLR 22 205 -362 273 156 0 0 chr5 12140175 12140220 -187489930 + MLT1F1 LTR MaLR 523 567 0 355 223 93 39 chr5 12140220 12140415 -187489735 - L1MC4a LINE L1 -394 7414 7193 3832 166 11 59 chr5 12141239 12141998 -187488152 - MER72 LTR ERV1 0 722 1 2030 117 0 37 chr5 12142026 12142325 -187487825 - AluSx SINE Alu -24 288 1 712 220 128 32 chr5 12142398 12142532 -187487618 - MLT1C LTR MaLR 0 467 303 2027 114 117 30 chr5 12142532 12142573 -187487577 - MSTA LTR MaLR 0 428 392 2265 107 0 32 chr5 12142573 12142883 -187487267 + AluSq SINE Alu 1 300 -13 2027 114 117 30 chr5 12142883 12143235 -187486915 - MSTA LTR MaLR -36 392 1 712 220 128 32 chr5 12143235 12143318 -187486832 - MLT1C LTR MaLR -164 303 229 579 200 57 14 chr5 12143346 12143486 -187486664 - MLT1C LTR MaLR -321 184 39 2035 138 7 0 chr5 12143557 12143853 -187486297 + AluSx SINE Alu 3 300 -12 1942 119 0 48 chr5 12144240 12144551 -187485599 - AluSx SINE Alu -16 296 1 819 159 0 57 chr5 12144579 12144736 -187485414 - AluJo SINE Alu -154 158 11 1995 155 3 0 chr5 12145192 12145488 -187484662 + AluJb SINE Alu 1 297 -15 564 190 129 95 chr5 12145977 12146209 -187483941 + MIR SINE MIR 10 249 -13 2104 157 11 11 chr5 12146541 12146889 -187483261 + MLT2C1 LTR ERVL 1 348 -49 1841 167 42 50 chr5 12146889 12147273 -187482877 - MLT1B LTR MaLR 0 390 10 380 128 64 0 chr5 12147281 12147375 -187482775 + (TCTG)n Simple_repeat Simple_repeat 1 100 0 251 137 0 137 chr5 12147375 12147448 -187482702 + MLT2C1 LTR ERVL 458 520 0 2327 111 0 7 chr5 12147559 12147866 -187482284 - AluSx SINE Alu -7 305 1 2439 74 0 3 chr5 12147928 12148224 -187481926 - AluY SINE Alu -16 295 1 2321 98 3 0 chr5 12148224 12148520 -187481630 - AluSx SINE Alu -15 297 1 587 162 0 0 chr5 12148615 12148720 -187481430 - FRAM SINE Alu -8 168 64 2291 110 3 3 chr5 12148817 12149127 -187481023 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr5 12149127 12149148 -187481002 + AT_rich Low_complexity Low_complexity 1 21 0 1006 229 85 98 chr5 12149154 12149283 -187480867 + L1ME1 LINE L1 5692 5821 -345 2399 88 0 28 chr5 12149283 12149602 -187480548 - AluSg SINE Alu 0 310 1 1006 229 85 98 chr5 12149602 12149921 -187480229 + L1ME1 LINE L1 5821 6134 -32 681 151 19 0 chr5 12149922 12150028 -187480122 + FLAM_C SINE Alu 2 109 -34 1719 174 0 16 chr5 12150100 12150410 -187479740 - AluJb SINE Alu 0 312 8 1666 132 4 0 chr5 12150873 12151108 -187479042 - AluSq SINE Alu -14 299 64 447 208 50 0 chr5 12151392 12151493 -187478657 - MLT1H LTR MaLR 0 549 444 * 914 223 30 47 chr5 12151475 12151785 -187478365 - MLT1H LTR MaLR -248 307 30 187 217 0 0 chr5 12152517 12152563 -187477587 + L2 LINE L2 2911 2956 -316 205 333 0 0 chr5 12153709 12153781 -187476369 + L2 LINE L2 2902 2973 -299 2237 196 52 5 chr5 12154182 12154626 -187475524 + L1MB7 LINE L1 5579 6043 -141 1968 101 7 35 chr5 12154778 12155087 -187475063 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 12156206 12156249 -187473901 + AT_rich Low_complexity Low_complexity 1 43 0 2055 186 38 53 chr5 12156249 12156372 -187473778 + MLT1D LTR MaLR 1 124 -381 2133 101 10 10 chr5 12156372 12156392 -187473758 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 12156392 12156413 -187473737 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2133 101 10 10 chr5 12156413 12156690 -187473460 - AluSx SINE Alu -31 281 2 2055 186 38 53 chr5 12156690 12157071 -187473079 + MLT1D LTR MaLR 124 497 -8 963 242 54 0 chr5 12157255 12157478 -187472672 + L1MC4 LINE L1 6800 7034 -1008 1218 156 0 0 chr5 12157491 12157664 -187472486 - AluSq SINE Alu -140 173 1 2030 226 66 20 chr5 12157697 12158290 -187471860 + L1MC4 LINE L1 7043 7662 -380 292 227 93 0 chr5 12158336 12158411 -187471739 + L1MB4 LINE L1 5812 5893 -278 1201 176 146 23 chr5 12158411 12158672 -187471478 + AluSg1 SINE Alu 2 294 -15 2364 104 0 0 chr5 12158674 12158981 -187471169 + AluSx SINE Alu 3 309 -3 1425 160 73 7 chr5 12158990 12159278 -187470872 + L1MB4 LINE L1 5873 6179 -1 1203 167 26 106 chr5 12159320 12159427 -187470723 + L1MC4 LINE L1 7709 7823 -219 808 65 28 0 chr5 12159427 12159534 -187470616 + HY1 scRNA scRNA 2 111 -1 1203 167 26 106 chr5 12159534 12159547 -187470603 + L1MC4 LINE L1 7823 7835 -207 207 114 0 0 chr5 12159547 12159582 -187470568 + (TG)n Simple_repeat Simple_repeat 2 36 0 1203 167 26 106 chr5 12159582 12159598 -187470552 + L1MC4 LINE L1 7835 7851 -191 2408 99 0 0 chr5 12159598 12159901 -187470249 + AluSx SINE Alu 1 303 -9 1203 167 26 106 chr5 12159901 12160110 -187470040 + L1MC4 LINE L1 7851 8028 -14 3156 73 22 44 chr5 12160421 12160875 -187469275 + MLT2A1 LTR ERVL 1 444 0 819 235 105 17 chr5 12160970 12161264 -187468886 + L1ME3 LINE L1 5843 6162 0 1855 195 40 2 chr5 12161922 12162363 -187467787 - MER89 LTR ERV1 0 559 2 518 202 176 8 chr5 12162518 12162637 -187467513 + MER2 DNA MER2_type 206 344 -1 274 161 18 36 chr5 12163610 12163666 -187466484 - MLT1A2 LTR MaLR 0 374 320 1031 139 0 0 chr5 12163681 12163825 -187466325 - MLT1A2 LTR MaLR -227 147 4 1543 158 99 56 chr5 12164040 12164229 -187465921 + MER2 DNA MER2_type 9 219 -126 1850 132 35 17 chr5 12164229 12164517 -187465633 - AluJo SINE Alu -19 293 1 1543 158 99 56 chr5 12164517 12164650 -187465500 + MER2 DNA MER2_type 219 345 0 2021 129 3 7 chr5 12164675 12164962 -187465188 - AluSx SINE Alu -26 286 1 902 192 124 1 chr5 12165204 12165421 -187464729 - MLT1D LTR MaLR -2 503 234 416 127 0 0 chr5 12165421 12165476 -187464674 + AluSg/x SINE Alu 193 247 -62 376 244 37 80 chr5 12165735 12165851 -187464299 + L1MC4 LINE L1 7273 7392 -650 2193 101 0 52 chr5 12165851 12166179 -187463971 + AluSx SINE Alu 1 311 -1 376 244 37 80 chr5 12166179 12166551 -187463599 + L1MC4 LINE L1 7392 7744 -298 1851 170 7 0 chr5 12166647 12166941 -187463209 + AluSx SINE Alu 1 296 -16 204 129 53 53 chr5 12167092 12167263 -187462887 + (TA)n Simple_repeat Simple_repeat 2 172 0 441 99 34 70 chr5 12167372 12167727 -187462423 + (TA)n Simple_repeat Simple_repeat 1 341 0 379 130 81 2 chr5 12167778 12168188 -187461962 + (TA)n Simple_repeat Simple_repeat 1 442 0 294 215 107 50 chr5 12168197 12168318 -187461832 + L1MC4 LINE L1 7910 8037 -5 321 305 48 0 chr5 12168682 12168787 -187461363 - L2 LINE L2 -2 3311 3202 351 224 135 13 chr5 12168862 12169018 -187461132 - Charlie2 DNA MER1_type -17 2845 2671 288 0 0 0 chr5 12169131 12169163 -187460987 + (CA)n Simple_repeat Simple_repeat 1 32 0 379 371 45 0 chr5 12169219 12169397 -187460753 - L1MEd LINE L1 -5482 637 452 2027 121 24 13 chr5 12169689 12169987 -187460163 + AluSx SINE Alu 1 301 -11 745 218 175 26 chr5 12170372 12170680 -187459470 - L1MC4 LINE L1 -5 8037 7684 2340 99 0 0 chr5 12170683 12170976 -187459174 + AluSg1 SINE Alu 1 293 -16 324 0 0 0 chr5 12171155 12171191 -187458959 + (CA)n Simple_repeat Simple_repeat 2 37 0 1574 150 59 28 chr5 12171239 12171361 -187458789 + AluJb SINE Alu 1 118 -194 183 42 0 0 chr5 12171361 12171385 -187458765 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1574 150 59 28 chr5 12171385 12171548 -187458602 + AluJb SINE Alu 118 295 -17 270 268 65 89 chr5 12171725 12171971 -187458179 + MLT1K LTR MaLR 189 428 -160 204 200 0 22 chr5 12172127 12172172 -187457978 + MIR SINE MIR 219 262 0 811 165 0 122 chr5 12172631 12172819 -187457331 + FRAM SINE Alu 1 165 -1 193 93 0 47 chr5 12174029 12174072 -187456078 + (TCTCCC)n Simple_repeat Simple_repeat 3 43 0 30 77 0 0 chr5 12174392 12174457 -187455693 + GC_rich Low_complexity Low_complexity 1 65 0 379 292 99 5 chr5 12175282 12175474 -187454676 - MIR SINE MIR -52 210 1 569 280 101 5 chr5 12175912 12176130 -187454020 - MIR SINE MIR -6 256 18 572 0 15 0 chr5 12176630 12176698 -187453452 + (TTTTA)n Simple_repeat Simple_repeat 2 70 0 2140 117 0 0 chr5 12176700 12176982 -187453168 - AluSx SINE Alu -30 282 1 22 0 0 0 chr5 12176994 12177016 -187453134 + AT_rich Low_complexity Low_complexity 1 22 0 187 226 151 0 chr5 12177378 12177431 -187452719 - MIR3 SINE MIR -21 187 127 21 0 0 0 chr5 12177500 12177521 -187452629 + AT_rich Low_complexity Low_complexity 1 21 0 721 215 58 174 chr5 12178008 12178252 -187451898 - L2 LINE L2 0 3313 3042 635 39 0 0 chr5 12178252 12178330 -187451820 - AluY SINE Alu -11 298 221 721 215 58 174 chr5 12178330 12178672 -187451478 - L2 LINE L2 -271 3042 2709 1179 172 43 0 chr5 12178678 12178885 -187451265 - MER2 DNA MER2_type 0 345 130 3993 132 82 20 chr5 12178885 12179591 -187450559 + Tigger2 DNA MER2_type 1 750 -1968 272 121 176 11 chr5 12179636 12179727 -187450423 + Tigger2 DNA MER2_type 2461 2566 -152 843 167 92 17 chr5 12179779 12179953 -187450197 - Tigger2 DNA MER2_type -2526 192 6 268 163 0 0 chr5 12179953 12180002 -187450148 + MER2 DNA MER2_type 128 176 -169 * 359 112 19 149 chr5 12179983 12180008 -187450142 + Tigger2 DNA MER2_type 2532 2559 -159 2206 92 0 3 chr5 12180008 12180300 -187449850 + AluSx SINE Alu 1 291 -21 359 112 19 149 chr5 12180300 12180381 -187449769 + Tigger2 DNA MER2_type 2559 2624 -94 2510 67 0 3 chr5 12180497 12180794 -187449356 + AluY SINE Alu 2 297 -14 940 95 0 4 chr5 12182115 12182336 -187447814 + AluSg SINE Alu 2 300 -12 2120 134 3 0 chr5 12182397 12182696 -187447454 + AluSx SINE Alu 1 300 -12 373 320 114 7 chr5 12183327 12183599 -187446551 + HAL1 LINE L1 1463 1763 -744 808 224 150 72 chr5 12183834 12184348 -187445802 + L1ME3 LINE L1 4820 5368 -797 431 309 0 0 chr5 12184349 12184459 -187445691 - MER8 DNA MER2_type -127 112 3 2434 238 111 12 chr5 12184459 12185182 -187444968 + L1ME3 LINE L1 5367 6160 -2 23 33 0 0 chr5 12186510 12186540 -187443610 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 12186684 12186705 -187443445 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 12186978 12186999 -187443151 + AT_rich Low_complexity Low_complexity 1 21 0 2415 97 0 0 chr5 12187142 12187451 -187442699 - AluSx SINE Alu -3 309 1 1751 175 34 3 chr5 12187518 12187810 -187442340 - AluSx SINE Alu -11 301 1 1264 216 163 25 chr5 12188299 12188697 -187441453 - MLT1H LTR MaLR 0 549 97 2188 109 7 3 chr5 12189256 12189550 -187440600 - AluSx SINE Alu -17 295 1 1820 174 3 3 chr5 12190974 12191279 -187438871 - AluJo SINE Alu -7 305 1 270 0 0 0 chr5 12191283 12191313 -187438837 + (T)n Simple_repeat Simple_repeat 1 30 0 210 224 0 0 chr5 12191486 12191535 -187438615 + GA-rich Low_complexity Low_complexity 3 51 0 2357 54 7 0 chr5 12191808 12192103 -187438047 - AluY SINE Alu -14 297 1 1955 108 0 0 chr5 12192367 12192617 -187437533 + AluSx SINE Alu 49 298 -14 232 295 214 63 chr5 12192729 12192912 -187437238 - L2 LINE L2 -17 3296 3142 1646 165 7 65 chr5 12192912 12193221 -187436929 - AluJb SINE Alu -21 291 1 232 295 214 63 chr5 12193221 12193369 -187436781 - L2 LINE L2 -171 3142 2915 * 261 303 290 24 chr5 12193365 12193662 -187436488 + L2 LINE L2 2569 2944 -370 27 0 0 0 chr5 12193865 12193892 -187436258 + AT_rich Low_complexity Low_complexity 1 27 0 2481 67 0 0 chr5 12194646 12194945 -187435205 - AluY SINE Alu -12 299 1 23 54 0 0 chr5 12195108 12195145 -187435005 + AT_rich Low_complexity Low_complexity 1 37 0 470 261 154 0 chr5 12195470 12195658 -187434492 - MLT1L LTR MaLR -8 607 391 310 252 55 88 chr5 12195928 12196166 -187433984 - L2 LINE L2 0 3313 3084 375 237 38 23 chr5 12199063 12199194 -187430956 + Charlie7 DNA MER1_type 2477 2609 -3 272 255 54 82 chr5 12199407 12199795 -187430355 - L1MC5 LINE L1 -272 7689 7313 546 268 83 20 chr5 12200265 12200519 -187429631 - L1MC4 LINE L1 -981 7061 6792 2001 126 29 0 chr5 12203824 12204156 -187425994 - AluSx SINE Alu 0 340 1 346 333 63 0 chr5 12204250 12204361 -187425789 - L2 LINE L2 -2 3270 3153 282 377 31 13 chr5 12204766 12204925 -187425225 - MIR3 SINE MIR -5 203 42 1864 164 60 0 chr5 12205705 12206023 -187424127 + MER1B DNA MER1_type 1 337 0 1930 140 0 0 chr5 12206174 12206452 -187423698 - AluSg SINE Alu -8 302 25 40 21 0 0 chr5 12207128 12207175 -187422975 + AT_rich Low_complexity Low_complexity 1 47 0 2277 79 0 33 chr5 12207460 12207763 -187422387 + AluSp SINE Alu 1 293 -20 1924 173 0 0 chr5 12208781 12209081 -187421069 - AluJb SINE Alu -12 300 1 21 0 0 0 chr5 12209219 12209240 -187420910 + AT_rich Low_complexity Low_complexity 1 21 0 856 154 0 0 chr5 12209240 12209363 -187420787 - FLAM_C SINE Alu -20 123 1 1318 277 76 9 chr5 12209521 12210110 -187420040 - L2 LINE L2 -204 3109 2471 645 257 59 10 chr5 12210118 12210320 -187419830 - L2 LINE L2 -1338 1976 1765 309 254 83 55 chr5 12212023 12212204 -187417946 - MIR SINE MIR -6 256 71 225 229 115 21 chr5 12212352 12212448 -187417702 + MIR SINE MIR 90 194 -68 209 311 134 34 chr5 12212446 12212565 -187417585 - L2 LINE L2 -1 3312 3182 * 1715 171 10 10 chr5 12212820 12213112 -187417038 - AluJo SINE Alu -20 292 1 2161 130 37 6 chr5 12213779 12214132 -187416018 - THE1B LTR MaLR 0 364 1 917 200 15 15 chr5 12214132 12214337 -187415813 - MER3 DNA MER1_type -4 205 1 646 180 0 0 chr5 12214805 12214905 -187415245 - FRAM SINE Alu -32 144 45 754 182 0 23 chr5 12216132 12216264 -187413886 + FLAM_C SINE Alu 1 129 -14 275 244 64 13 chr5 12217034 12217112 -187413038 - MER3 DNA MER1_type -127 82 1 317 221 143 0 chr5 12217335 12217412 -187412738 - MER2 DNA MER2_type -257 88 1 1398 171 114 7 chr5 12217707 12217987 -187412163 + AluJo SINE Alu 1 310 -2 27 0 0 0 chr5 12217989 12218016 -187412134 + AT_rich Low_complexity Low_complexity 1 27 0 1927 149 0 7 chr5 12218338 12218639 -187411511 + AluJb SINE Alu 1 299 -13 1291 135 18 135 chr5 12219371 12219770 -187410380 + Tigger5 DNA MER2_type 11 2322 -1 422 262 6 90 chr5 12219770 12220004 -187410146 + L1MC4 LINE L1 7040 7252 -735 1096 243 83 98 chr5 12220006 12220587 -187409563 - MLT1G LTR MaLR -3 587 16 349 350 33 22 chr5 12220596 12220776 -187409374 + L1MC4a LINE L1 7169 7350 -458 2495 183 33 9 chr5 12220786 12221328 -187408822 + MER90 LTR ERV1 1 596 -18 292 310 139 12 chr5 12221375 12221680 -187408470 + L1MC4a LINE L1 5576 5793 -328 208 375 79 29 chr5 12225425 12225841 -187404309 + L2 LINE L2 2320 2756 -558 1295 194 24 8 chr5 12226294 12226546 -187403604 + AluJo SINE Alu 39 294 -18 2262 108 0 13 chr5 12226794 12227109 -187403041 - AluSx SINE Alu 0 312 2 266 358 75 11 chr5 12227388 12227575 -187402575 - MIR SINE MIR -40 222 24 351 299 76 28 chr5 12227834 12227864 -187402286 - MIR3 SINE MIR -33 175 148 2123 115 0 20 chr5 12227864 12228169 -187401981 - AluSx SINE Alu -13 299 1 351 299 76 28 chr5 12228169 12228282 -187401868 - MIR3 SINE MIR -60 148 25 470 273 123 0 chr5 12228574 12228755 -187401395 - L2 LINE L2 -747 2567 2363 2424 88 0 25 chr5 12228755 12229072 -187401078 - AluSc SINE Alu 0 309 1 342 91 0 0 chr5 12230087 12230142 -187400008 + (TG)n Simple_repeat Simple_repeat 1 55 0 2089 110 45 0 chr5 12231370 12231660 -187398490 - AluSx SINE Alu -9 303 1 24 32 0 0 chr5 12232826 12232857 -187397293 + AT_rich Low_complexity Low_complexity 1 31 0 315 0 0 0 chr5 12234092 12234127 -187396023 + (TA)n Simple_repeat Simple_repeat 2 36 0 2176 110 0 25 chr5 12234127 12234445 -187395705 - AluSx SINE Alu -2 310 1 216 0 0 0 chr5 12234470 12234494 -187395656 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 26 64 0 0 chr5 12234901 12234948 -187395202 + AT_rich Low_complexity Low_complexity 1 47 0 1370 205 115 18 chr5 12237570 12238023 -187392127 + L1M4 LINE L1 4802 5298 -848 484 275 178 51 chr5 12238048 12238660 -187391490 + L2 LINE L2 2625 3311 -2 316 311 151 50 chr5 12238922 12239073 -187391077 - L1MC/D LINE L1 -2108 5700 5515 1721 88 102 56 chr5 12239073 12239358 -187390792 - AluSg SINE Alu -10 300 3 316 311 151 50 chr5 12239358 12239444 -187390706 - L1MC/D LINE L1 -2293 5515 5439 2015 151 0 0 chr5 12441496 12441803 -187188347 - AluSx SINE Alu 0 307 1 2022 148 0 10 chr5 12441976 12442281 -187187869 + AluJb SINE Alu 1 302 -10 444 292 0 15 chr5 12442630 12442760 -187187390 - MIR SINE MIR -127 135 8 1551 175 32 3 chr5 12442945 12443255 -187186895 - MER90 LTR ERV1 -254 360 1 263 345 36 24 chr5 12443265 12443433 -187186717 - L1MC4 LINE L1 -612 7430 7261 1146 242 81 98 chr5 12443454 12444036 -187186114 + MLT1G LTR MaLR 16 587 -3 437 262 6 98 chr5 12444038 12444274 -187185876 - L1MC4 LINE L1 -733 7228 7040 1305 134 20 136 chr5 12444274 12444673 -187185477 - Tigger5 DNA MER2_type -1 2322 11 429 223 45 36 chr5 12445300 12445412 -187184738 + MER81 DNA DNA 2 114 0 299 227 134 10 chr5 12445875 12445972 -187184178 + MLT1C LTR MaLR 5 113 -354 2193 113 0 0 chr5 12445989 12446272 -187183878 - AluSx SINE Alu -29 283 1 637 129 0 11 chr5 12446344 12446437 -187183713 - AluS SINE Alu -221 92 1 1067 214 58 90 chr5 12446437 12446815 -187183335 + MLT1C LTR MaLR 102 467 0 508 112 31 0 chr5 12447274 12447372 -187182778 + CT-rich Low_complexity Low_complexity 2 102 0 267 187 13 27 chr5 12448006 12448081 -187182069 - MLT1K LTR MaLR -323 265 192 408 40 0 0 chr5 12448441 12448491 -187181659 + (GA)n Simple_repeat Simple_repeat 2 51 0 * 558 0 0 0 chr5 12448490 12448552 -187181598 + (TG)n Simple_repeat Simple_repeat 2 63 0 1184 210 102 46 chr5 12448606 12448818 -187181332 + L1MD3 LINE L1 7459 7658 -384 2441 104 0 0 chr5 12448818 12449127 -187181023 + AluSx SINE Alu 1 309 -3 1184 210 102 46 chr5 12449127 12449142 -187181008 + L1MD3 LINE L1 7658 7671 -371 3510 191 10 2 chr5 12449142 12449740 -187180410 - MER77 LTR ERV1 -2 603 1 1184 210 102 46 chr5 12449740 12450005 -187180145 + L1MD3 LINE L1 7671 8041 -1 2396 80 23 0 chr5 12450025 12450324 -187179826 + AluSx SINE Alu 1 306 -6 183 242 0 65 chr5 12450548 12450610 -187179540 + MIR SINE MIR 96 153 -109 441 256 70 58 chr5 12450851 12451007 -187179143 + L2 LINE L2 3154 3311 -2 2088 146 0 7 chr5 12451190 12451367 -187178783 - AluSx SINE Alu -6 306 130 189 74 0 0 chr5 12451367 12451394 -187178756 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2088 146 0 7 chr5 12451394 12451524 -187178626 - AluSx SINE Alu -182 130 1 1543 201 120 21 chr5 12451918 12452336 -187177814 + MLT1C LTR MaLR 1 459 -8 266 115 19 0 chr5 12452338 12452390 -187177760 + (TATAA)n Simple_repeat Simple_repeat 1 53 0 450 280 91 32 chr5 12452512 12452861 -187177289 + L1ME3A LINE L1 5127 5476 -690 2304 234 57 39 chr5 12452902 12453496 -187176654 + MER77 LTR ERV1 1 605 0 1557 189 70 22 chr5 12453954 12454324 -187175826 + MLT1B LTR MaLR 1 388 -2 224 263 70 0 chr5 12456091 12456148 -187174002 - L2 LINE L2 -12 3260 3200 479 303 19 19 chr5 12456169 12456324 -187173826 + MIR SINE MIR 90 244 -18 244 280 167 7 chr5 12456336 12456486 -187173664 - MIR SINE MIR -73 189 16 298 238 83 72 chr5 12456597 12456611 -187173539 + MER112 DNA MER1_type 1 13 -247 1747 167 0 67 chr5 12456611 12456940 -187173210 - AluJo SINE Alu -5 307 1 298 238 83 72 chr5 12456940 12457087 -187173063 + MER112 DNA MER1_type 13 157 -103 387 0 0 0 chr5 12457087 12457130 -187173020 + (TG)n Simple_repeat Simple_repeat 2 44 0 1443 180 67 0 chr5 12457130 12457397 -187172753 - AluJb SINE Alu -27 285 1 298 238 83 72 chr5 12457397 12457426 -187172724 + MER112 DNA MER1_type 156 195 -65 389 280 122 62 chr5 12458004 12458358 -187171792 + MLT1J2 LTR MaLR 31 405 -45 1449 224 80 23 chr5 12458473 12458910 -187171240 + MLT1C LTR MaLR 6 467 0 2195 118 3 0 chr5 12459121 12459409 -187170741 - AluSx SINE Alu -18 294 6 2152 98 3 18 chr5 12459791 12460123 -187170027 - AluSx SINE Alu 0 328 1 1115 216 16 0 chr5 12460183 12460428 -187169722 - MLT1C LTR MaLR -6 461 213 1883 149 0 17 chr5 12460429 12460738 -187169412 - AluSx SINE Alu 0 304 1 1404 262 32 46 chr5 12460755 12461278 -187168872 + L1ME3A LINE L1 5595 6110 -60 2197 95 0 63 chr5 12461397 12461714 -187168436 + AluSx SINE Alu 1 297 -15 1253 114 0 0 chr5 12461719 12461885 -187168265 + AluSq SINE Alu 139 304 -9 222 121 0 0 chr5 12461922 12461955 -187168195 + MIR SINE MIR 218 250 -12 321 230 50 20 chr5 12462071 12462171 -187167979 + L1ME3A LINE L1 6060 6162 -8 279 325 68 0 chr5 12462183 12462300 -187167850 + MIR SINE MIR 137 261 -1 2751 161 66 19 chr5 12462406 12462892 -187167258 - LTR22 LTR ERVK 0 509 1 506 220 57 38 chr5 12462932 12463091 -187167059 - MER46C DNA MER2_type -174 164 3 335 233 58 0 chr5 12463466 12463552 -187166598 + MER53 DNA DNA 5 95 -94 * 346 198 278 8 chr5 12463478 12463604 -187166546 - MER53 DNA DNA -7 182 23 2092 171 34 8 chr5 12463668 12464048 -187166102 + MLT1B LTR MaLR 1 390 0 1921 145 21 0 chr5 12464702 12464985 -187165165 - AluSx SINE Alu -23 289 1 654 237 19 0 chr5 12465095 12465251 -187164899 - MER20 DNA MER1_type -14 205 47 276 160 40 0 chr5 12466227 12466277 -187163873 - MER5B DNA MER1_type -126 52 1 266 256 73 0 chr5 12466292 12466374 -187163776 + MER5B DNA MER1_type 58 145 -33 183 265 255 20 chr5 12466402 12466500 -187163650 - MER5A DNA MER1_type -2 187 67 341 203 35 7 chr5 12466542 12466621 -187163529 + MER5A DNA MER1_type 13 109 -80 193 291 78 48 chr5 12466663 12466766 -187163384 - MIR3 SINE MIR -39 169 64 376 311 59 35 chr5 12467368 12467492 -187162658 - MARNA DNA Mariner -242 344 224 1954 132 7 26 chr5 12467492 12467795 -187162355 - AluJb SINE Alu -15 297 1 376 311 59 35 chr5 12467795 12467924 -187162226 - MARNA DNA Mariner -362 224 85 429 76 38 13 chr5 12468019 12468098 -187162052 + CT-rich Low_complexity Low_complexity 2 82 0 1840 219 35 20 chr5 12468701 12469157 -187160993 - MLT1C LTR MaLR -2 465 3 2100 121 0 0 chr5 12469219 12469528 -187160622 - AluSx SINE Alu 0 313 5 2403 84 0 10 chr5 12469635 12469984 -187160166 - AluSq SINE Alu 0 313 1 405 198 57 38 chr5 12470592 12470749 -187159401 - MLT1D LTR MaLR -16 451 292 583 180 55 0 chr5 12470841 12470969 -187159181 - MLT1D LTR MaLR -366 139 5 324 212 0 115 chr5 12471380 12471493 -187158657 + MER5A DNA MER1_type 10 109 -80 344 291 62 34 chr5 12472042 12472221 -187157929 + MLT1K LTR MaLR 145 328 -260 232 268 28 0 chr5 12472489 12472560 -187157590 + MLT1K LTR MaLR 509 581 -7 1939 156 0 3 chr5 12472839 12473127 -187157023 - AluJb SINE Alu -25 287 1 361 118 36 154 chr5 12473127 12473237 -187156913 - AluJo SINE Alu -167 135 39 418 301 75 7 chr5 12473503 12473649 -187156501 + MIR SINE MIR 107 262 0 362 211 65 49 chr5 12474415 12474601 -187155549 - MLT1C LTR MaLR -203 187 6 2273 92 17 0 chr5 12475047 12475340 -187154810 - AluSx SINE Alu -14 298 1 1095 257 36 23 chr5 12475345 12475648 -187154502 + LTR40a LTR ERVL 65 371 -148 607 118 11 0 chr5 12475648 12475741 -187154409 + MER74A LTR ERVL 1 94 -464 2055 133 0 7 chr5 12475849 12476179 -187153971 - AluSx SINE Alu 0 328 1 2351 110 0 0 chr5 12476183 12476492 -187153658 - AluSx SINE Alu -3 309 1 1859 98 0 4 chr5 12476989 12477224 -187152926 - AluSq SINE Alu -79 234 1 270 257 27 14 chr5 12477693 12477767 -187152383 + MER68 LTR ERV1 224 298 -264 298 272 48 20 chr5 12477844 12477991 -187152159 + MER77 LTR ERV1 427 577 -28 2204 120 7 0 chr5 12478539 12478847 -187151303 - AluSx SINE Alu -2 310 1 489 93 67 0 chr5 12478960 12479035 -187151115 + MADE1 DNA Mariner 1 80 0 918 124 0 0 chr5 12479131 12479260 -187150890 + FLAM_C SINE Alu 14 142 -1 1244 172 57 0 chr5 12479268 12479512 -187150638 + L1M4 LINE L1 4668 4925 -1221 406 214 95 77 chr5 12479665 12479833 -187150317 - L1M4 LINE L1 -2865 3281 3111 306 277 92 0 chr5 12479841 12479971 -187150179 - L1M4 LINE L1 -3136 3010 2869 1932 130 60 41 chr5 12480504 12480872 -187149278 + THE1C LTR MaLR 1 375 0 2359 97 0 0 chr5 12480903 12481203 -187148947 - AluY SINE Alu -11 300 1 340 215 158 51 chr5 12481962 12482120 -187148030 - MER5A DNA MER1_type -6 183 9 761 196 27 71 chr5 12482135 12482201 -187147949 - MER5B DNA MER1_type 0 178 111 2627 75 0 0 chr5 12482201 12482509 -187147641 + AluSq SINE Alu 1 308 -5 761 196 27 71 chr5 12482509 12482626 -187147524 - MER5B DNA MER1_type -67 111 3 2112 107 4 0 chr5 12482888 12483195 -187146955 + AluSx SINE Alu 1 308 0 2006 159 3 7 chr5 12483531 12483840 -187146310 + AluJo SINE Alu 1 308 -4 558 285 35 0 chr5 12483860 12484032 -187146118 + MLT1H LTR MaLR 165 342 -207 2359 115 0 0 chr5 12484213 12484525 -187145625 + AluSx SINE Alu 1 312 0 261 0 0 0 chr5 12484763 12484792 -187145358 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1900 131 4 0 chr5 12484800 12485075 -187145075 - AluJb SINE Alu -36 276 1 25 0 0 0 chr5 12485326 12485351 -187144799 + AT_rich Low_complexity Low_complexity 1 25 0 677 223 16 77 chr5 12486103 12486350 -187143800 + MARNA DNA Mariner 184 415 -171 227 191 0 43 chr5 12487051 12487098 -187143052 - L2 LINE L2 0 3272 3228 2720 30 3 0 chr5 12487313 12487617 -187142533 - AluY SINE Alu -6 305 1 2184 119 86 6 chr5 12488037 12488374 -187141776 + THE1B LTR MaLR 1 364 0 297 155 0 0 chr5 12488500 12488558 -187141592 + (CA)n Simple_repeat Simple_repeat 1 58 0 705 268 84 9 chr5 12488910 12489123 -187141027 - MIR SINE MIR -19 243 15 462 200 30 0 chr5 12489207 12489307 -187140843 - MLT1G LTR MaLR -6 584 482 372 310 48 16 chr5 12489566 12489753 -187140397 - MLT1G1 LTR MaLR -398 197 5 1962 89 4 0 chr5 12490082 12490330 -187139820 + AluSp SINE Alu 54 302 -11 2052 86 25 4 chr5 12491013 12491319 -187138831 + AluSx SINE Alu 1 312 0 409 246 0 79 chr5 12491414 12491540 -187138610 + MIR SINE MIR 115 230 -32 31 26 0 0 chr5 12492068 12492106 -187138044 + AT_rich Low_complexity Low_complexity 1 38 0 2157 120 0 31 chr5 12492115 12492432 -187137718 - AluSg SINE Alu -3 307 1 2761 231 69 83 chr5 12492438 12492521 -187137629 - L1MC4 LINE L1 -1 8041 7958 2264 121 0 3 chr5 12492521 12492826 -187137324 - AluSx SINE Alu -8 304 1 2761 231 69 83 chr5 12492826 12493428 -187136722 - L1MC4 LINE L1 -84 7958 7378 2277 108 0 14 chr5 12493428 12493724 -187136426 - AluSq SINE Alu -21 292 1 2761 231 69 83 chr5 12493724 12494236 -187135914 - L1MC4 LINE L1 -664 7378 6860 754 205 42 6 chr5 12494595 12494761 -187135389 + MER20 DNA MER1_type 34 205 -14 2307 100 0 10 chr5 12494849 12495159 -187134991 + AluSx SINE Alu 1 307 -5 773 218 41 0 chr5 12495844 12496014 -187134136 - MER45A DNA AcHobo -1 177 1 2453 124 28 5 chr5 12496187 12496575 -187133575 - MLT2C1 LTR ERVL 0 397 1 256 209 353 14 chr5 12497667 12497806 -187132344 - MER5A DNA MER1_type -3 186 1 877 196 41 0 chr5 12498121 12498340 -187131810 + L1MB7 LINE L1 5955 6182 -2 1913 166 0 10 chr5 12498967 12499269 -187130881 - AluJb SINE Alu -13 299 1 564 188 0 60 chr5 12499877 12499994 -187130156 + MER81 DNA DNA 2 111 -3 2165 106 24 3 chr5 12500726 12501019 -187129131 + AluSq SINE Alu 1 299 -14 215 103 29 73 chr5 12501020 12501088 -187129062 + GA-rich Low_complexity Low_complexity 1 65 0 251 145 97 16 chr5 12501262 12501324 -187128826 + GA-rich Low_complexity Low_complexity 1 67 0 226 274 84 106 chr5 12501715 12501894 -187128256 - MIR SINE MIR -14 248 74 307 235 0 0 chr5 12501984 12502052 -187128098 - MER5A DNA MER1_type -106 83 16 497 254 188 0 chr5 12502207 12502376 -187127774 - L1MD2 LINE L1 -9 6350 6128 180 0 0 0 chr5 12502376 12502396 -187127754 + (TG)n Simple_repeat Simple_repeat 2 21 0 497 254 188 0 chr5 12502396 12502450 -187127700 - L1MD2 LINE L1 -231 6128 6085 * 611 297 61 0 chr5 12502446 12502658 -187127492 - L1MD1 LINE L1 -159 6083 5859 2362 74 7 10 chr5 12502936 12503232 -187126918 - AluSc SINE Alu -14 295 1 2076 147 6 16 chr5 12503813 12504127 -187126023 - AluJo SINE Alu -1 311 1 243 0 0 0 chr5 12504942 12504969 -187125181 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2285 85 3 3 chr5 12504970 12505280 -187124870 - AluSq SINE Alu 0 310 1 273 146 0 0 chr5 12505881 12505929 -187124221 + (CA)n Simple_repeat Simple_repeat 1 48 0 2120 89 55 27 chr5 12506635 12506928 -187123222 + AluSx SINE Alu 1 301 -11 1500 281 62 19 chr5 12507411 12507965 -187122185 + L1ME3A LINE L1 5583 6159 -11 188 35 35 0 chr5 12507965 12507994 -187122156 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 412 119 0 0 chr5 12508000 12508059 -187122091 - AluJ/FLAM SINE Alu -252 60 2 224 370 37 9 chr5 12508119 12508227 -187121923 + MIR SINE MIR 152 262 0 2164 123 0 3 chr5 12508706 12508999 -187121151 + AluSq SINE Alu 1 292 -21 648 255 0 25 chr5 12509093 12509254 -187120896 + MIR SINE MIR 98 254 -8 2356 94 3 3 chr5 12509970 12510269 -187119881 + AluSq SINE Alu 1 299 -14 943 234 75 34 chr5 12510273 12510538 -187119612 + MLT1C LTR MaLR 192 467 0 367 341 0 0 chr5 12510659 12510838 -187119312 + (CA)n Simple_repeat Simple_repeat 2 180 0 294 366 0 0 chr5 12510895 12511070 -187119080 + (CA)n Simple_repeat Simple_repeat 2 176 0 343 352 0 0 chr5 12511105 12511284 -187118866 + (CA)n Simple_repeat Simple_repeat 2 180 0 * 346 291 0 53 chr5 12511236 12511425 -187118725 + (CACG)n Simple_repeat Simple_repeat 1 179 0 263 378 9 0 chr5 12511488 12511682 -187118468 - L1P3 LINE L1 -302 5819 5625 656 226 55 6 chr5 12511688 12511852 -187118298 - L1MA10 LINE L1 0 6334 6163 774 188 0 0 chr5 12511860 12511993 -187118157 - FLAM_A SINE Alu 0 133 1 1621 143 4 24 chr5 12512527 12512779 -187117371 - AluJo SINE Alu -38 274 28 1078 189 50 36 chr5 12512930 12513231 -187116919 - LTR37A LTR ERV1 0 426 122 1556 214 33 82 chr5 12513237 12513723 -187116427 + MLT1C LTR MaLR 6 467 0 188 363 29 29 chr5 12514104 12514206 -187115944 - L2 LINE L2 -2 3311 3210 2492 81 0 0 chr5 12514387 12514683 -187115467 - AluSg SINE Alu -14 296 1 223 89 0 44 chr5 12515822 12515867 -187114283 + (TTTC)n Simple_repeat Simple_repeat 4 46 0 282 98 18 6 chr5 12515867 12515921 -187114229 - AluJo SINE Alu -263 37 1 1960 138 0 7 chr5 12516704 12516980 -187113170 - AluSx SINE Alu -8 304 31 1628 148 104 4 chr5 12517307 12517577 -187112573 - AluJb SINE Alu -15 297 1 2478 61 0 22 chr5 12517694 12518027 -187112123 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 12518096 12518117 -187112033 + AT_rich Low_complexity Low_complexity 1 21 0 23 101 0 0 chr5 12519957 12520036 -187110114 + GC_rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr5 12520218 12520242 -187109908 + GC_rich Low_complexity Low_complexity 1 24 0 40 0 0 0 chr5 12520425 12520465 -187109685 + GC_rich Low_complexity Low_complexity 1 40 0 264 59 0 0 chr5 12521625 12521659 -187108491 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 687 52 155 0 chr5 12522042 12522139 -187108011 - THE1C LTR MaLR -263 112 1 387 248 73 0 chr5 12522776 12522885 -187107265 + MIR SINE MIR 111 227 -35 204 40 0 0 chr5 12522957 12522982 -187107168 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2063 117 3 3 chr5 12524542 12524833 -187105317 - AluSx SINE Alu -21 291 1 675 35 0 0 chr5 12525676 12525762 -187104388 + (GA)n Simple_repeat Simple_repeat 2 87 0 935 141 7 0 chr5 12525762 12525904 -187104246 - AluSg/x SINE Alu -41 271 129 886 189 0 0 chr5 12525922 12526065 -187104085 - FLAM_C SINE Alu 0 143 1 2361 107 0 0 chr5 12526861 12527159 -187102991 - AluSx SINE Alu -14 298 1 441 318 28 11 chr5 12527223 12527399 -187102751 + MLT1L LTR MaLR 433 611 -4 1185 140 151 65 chr5 12528000 12528304 -187101846 + AluJo SINE Alu 1 302 0 451 298 23 8 chr5 12528908 12529039 -187101111 - LTR67 LTR ERVL -1 556 424 180 0 0 0 chr5 12529069 12529089 -187101061 + (A)n Simple_repeat Simple_repeat 1 20 0 2449 227 48 5 chr5 12529103 12529689 -187100461 - L1MC3 LINE L1 -25 7760 7150 763 159 0 43 chr5 12530122 12530260 -187099890 + FLAM_C SINE Alu 1 132 -1 2197 109 0 61 chr5 12530319 12530648 -187099502 - AluSx SINE Alu -3 309 1 1454 189 115 9 chr5 12530905 12531243 -187098907 + MLT1A2 LTR MaLR 1 374 0 271 208 0 57 chr5 12532683 12532789 -187097361 + (CTCA)n Simple_repeat Simple_repeat 4 103 0 183 146 0 0 chr5 12534208 12534249 -187095901 + (A)n Simple_repeat Simple_repeat 1 41 0 513 289 18 36 chr5 12534374 12534540 -187095610 + L1ME1 LINE L1 5953 6115 -51 330 250 7 46 chr5 12534553 12534705 -187095445 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 1999 121 3 35 chr5 12534764 12535079 -187095071 + AluSx SINE Alu 1 305 -7 2110 132 3 10 chr5 12535091 12535387 -187094763 + AluJo SINE Alu 5 298 -14 216 0 0 0 chr5 12536031 12536055 -187094095 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2327 81 14 0 chr5 12536607 12536903 -187093247 - AluSc SINE Alu -9 300 1 985 139 7 0 chr5 12536903 12537047 -187093103 - FRAM SINE Alu -14 162 18 231 248 9 55 chr5 12537573 12537682 -187092468 + G-rich Low_complexity Low_complexity 2 105 0 1714 234 64 2 chr5 12537855 12538295 -187091855 - MLT1C LTR MaLR 0 467 1 2222 111 0 3 chr5 12538732 12539021 -187091129 - AluSx SINE Alu -24 288 1 341 231 64 22 chr5 12539253 12539408 -187090742 - MER63 DNA MER1_type -2 1686 675 439 256 48 0 chr5 12539439 12539564 -187090586 - MIR SINE MIR -92 170 40 337 307 68 0 chr5 12539599 12539762 -187090388 - L1ME4a LINE L1 -224 5897 5724 413 249 6 0 chr5 12540092 12540269 -187089881 + (CA)n Simple_repeat Simple_repeat 1 178 0 2200 182 42 7 chr5 12540547 12540817 -187089333 - MLT1C LTR MaLR -16 451 192 6210 84 9 15 chr5 12540817 12541199 -187088951 + L1PA10 LINE L1 5106 5489 -679 2394 93 0 3 chr5 12541199 12541499 -187088651 + AluSp SINE Alu 1 299 -14 6210 84 9 15 chr5 12541499 12542170 -187087980 + L1PA10 LINE L1 5489 6155 -13 198 0 0 0 chr5 12542170 12542192 -187087958 + (TTAAA)n Simple_repeat Simple_repeat 4 25 0 6210 84 9 15 chr5 12542192 12542203 -187087947 + L1PA10 LINE L1 6155 6165 -3 2200 182 42 7 chr5 12542203 12542365 -187087785 - MLT1C LTR MaLR -275 192 4 189 0 0 0 chr5 12542533 12542554 -187087596 + (T)n Simple_repeat Simple_repeat 1 21 0 719 202 56 17 chr5 12542948 12543233 -187086917 + MER74A LTR ERVL 170 558 0 863 137 27 0 chr5 12543236 12543382 -187086768 + LTR40a LTR ERVL 370 519 0 471 196 0 28 chr5 12543673 12543780 -187086370 - MER5A DNA MER1_type -84 105 2 225 229 0 0 chr5 12544116 12544164 -187085986 + L2 LINE L2 3224 3271 -1 2302 89 14 0 chr5 12544378 12544669 -187085481 + AluSp SINE Alu 1 295 -18 245 295 64 27 chr5 12545085 12545200 -187084950 + MIR SINE MIR 40 157 -75 1290 202 77 62 chr5 12545645 12546100 -187084050 + MLT1C LTR MaLR 6 467 0 2204 138 0 0 chr5 12546477 12546774 -187083376 - AluSx SINE Alu -15 297 1 216 289 62 99 chr5 12546939 12547150 -187083000 + MIR SINE MIR 55 257 -5 1317 190 40 0 chr5 12547210 12547484 -187082666 + MER58B DNA MER1_type 57 341 0 414 295 138 9 chr5 12547484 12547694 -187082456 + MIR SINE MIR 26 262 0 619 270 81 43 chr5 12548260 12548630 -187081520 + MLT1J2 LTR MaLR 59 442 -8 351 269 107 54 chr5 12548630 12548779 -187081371 - MIR3 SINE MIR -40 168 12 35 0 0 0 chr5 12548785 12548820 -187081330 + AT_rich Low_complexity Low_complexity 1 35 0 1284 260 68 41 chr5 12548958 12549373 -187080777 - LTR41 LTR ERVL -6 767 342 1243 290 91 24 chr5 12549651 12550203 -187079947 - MLT1E LTR MaLR 0 593 5 2110 144 3 3 chr5 12550241 12550553 -187079597 - AluSx SINE Alu 0 312 1 1342 229 53 51 chr5 12550798 12551231 -187078919 - MLT1C LTR MaLR 0 467 34 298 238 33 90 chr5 12551542 12551664 -187078486 + MIR SINE MIR 81 195 -67 462 86 14 20 chr5 12551667 12551752 -187078398 + MLT1E1 LTR MaLR 1 81 -512 383 304 26 41 chr5 12551869 12552063 -187078087 - MLT1K LTR MaLR -244 344 154 743 316 94 2 chr5 12552512 12552927 -187077223 + LTR33 LTR ERVL 37 489 -32 2038 142 0 31 chr5 12552978 12553295 -187076855 + AluSx SINE Alu 4 310 -2 1771 164 3 40 chr5 12554920 12555224 -187074926 - AluJo SINE Alu -14 298 6 2458 73 13 0 chr5 12555249 12555549 -187074601 - AluY SINE Alu -7 304 1 2753 134 11 17 chr5 12556620 12557083 -187073067 + MER4C LTR ERV1 3 462 -3 1679 196 19 11 chr5 12557286 12557659 -187072491 + MLT1B LTR MaLR 15 390 0 2047 101 56 10 chr5 12558567 12558855 -187071295 - AluSq SINE Alu -12 301 1 2550 62 3 3 chr5 12558881 12559189 -187070961 - AluY SINE Alu -3 308 1 422 273 86 16 chr5 12560579 12560766 -187069384 + L2 LINE L2 3094 3293 -20 1968 125 25 7 chr5 12561494 12561811 -187068339 - AluSq SINE Alu 0 322 1 3379 173 75 78 chr5 12562126 12562990 -187067160 + MER21B LTR ERV1 1 862 -1 544 297 146 47 chr5 12564522 12565298 -187064852 - L2 LINE L2 -40 3273 2428 211 274 183 21 chr5 12566060 12566246 -187063904 - L2 LINE L2 -1163 2151 1936 311 258 106 46 chr5 12566274 12566425 -187063725 - MER63A DNA MER1_type 0 210 51 2376 101 0 3 chr5 12567915 12568221 -187061929 - AluSq SINE Alu -8 305 1 204 297 121 0 chr5 12569544 12569635 -187060515 + MIR SINE MIR 99 200 -62 1777 174 16 7 chr5 12570003 12570307 -187059843 + AluJo SINE Alu 1 307 -5 493 254 8 8 chr5 12570506 12570624 -187059526 + L2 LINE L2 3193 3310 -3 2258 101 0 3 chr5 12571790 12572086 -187058064 + AluSx SINE Alu 1 295 -17 447 52 0 0 chr5 12572087 12572145 -187058005 + (CA)n Simple_repeat Simple_repeat 2 59 0 1911 118 54 25 chr5 12572149 12572429 -187057721 + AluSx SINE Alu 1 288 -24 401 75 0 15 chr5 12572432 12572499 -187057651 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 2382 76 9 22 chr5 12573625 12573941 -187056209 + AluSp SINE Alu 1 312 -1 2078 135 10 0 chr5 12574895 12575191 -187054959 - AluSx SINE Alu -13 299 1 335 296 171 19 chr5 12576257 12576473 -187053677 + MIR SINE MIR 14 262 0 2026 148 0 22 chr5 12576516 12576833 -187053317 - AluJb SINE Alu -2 310 1 519 225 59 59 chr5 12577724 12577755 -187052395 + MER20 DNA MER1_type 33 63 -156 2053 125 3 10 chr5 12577755 12578051 -187052099 - AluSx SINE Alu -18 294 1 519 225 59 59 chr5 12578051 12578206 -187051944 + MER20 DNA MER1_type 62 219 0 1882 176 10 0 chr5 12578478 12578784 -187051366 - AluJo SINE Alu -3 309 1 1994 119 17 3 chr5 12579157 12579451 -187050699 + AluSx SINE Alu 1 298 -14 2156 89 14 3 chr5 12579874 12580179 -187049971 + AluSq SINE Alu 1 308 0 1698 178 132 64 chr5 12580422 12580819 -187049331 + MLT1D LTR MaLR 3 438 -67 2850 7 0 0 chr5 12580819 12581121 -187049029 - AluYb8 SINE Alu -16 302 1 1698 178 132 64 chr5 12581121 12581194 -187048956 + MLT1D LTR MaLR 438 505 0 860 136 0 0 chr5 12581271 12581389 -187048761 - FLAM_C SINE Alu -15 118 1 22 0 0 0 chr5 12581410 12581432 -187048718 + AT_rich Low_complexity Low_complexity 1 22 0 377 315 151 50 chr5 12583444 12583530 -187046620 + L1ME4a LINE L1 5439 5515 -2293 1778 87 101 56 chr5 12583530 12583816 -187046334 + AluSg SINE Alu 3 301 -9 377 315 151 50 chr5 12583816 12583967 -187046183 + L1ME4a LINE L1 5515 5700 -2108 346 271 192 34 chr5 12584019 12584196 -187045954 + L1ME4a LINE L1 5841 6045 -76 429 257 174 69 chr5 12584229 12584579 -187045571 - L2 LINE L2 -2 3311 2925 432 194 188 21 chr5 12584705 12584849 -187045301 - L1M4 LINE L1 -1177 4969 4802 26 64 0 0 chr5 12587472 12587519 -187042631 + AT_rich Low_complexity Low_complexity 1 47 0 216 0 0 0 chr5 12587926 12587950 -187042200 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2136 128 0 3 chr5 12587975 12588280 -187041870 + AluSq SINE Alu 1 304 -9 222 121 0 0 chr5 12588317 12588350 -187041800 + MIR SINE MIR 218 250 -12 321 230 50 20 chr5 12588466 12588566 -187041584 + L1ME3A LINE L1 6060 6162 -8 279 325 68 0 chr5 12588578 12588695 -187041455 + MIR SINE MIR 137 261 -1 2675 165 68 19 chr5 12588801 12589286 -187040864 - LTR22 LTR ERVK 0 509 1 506 220 57 38 chr5 12589327 12589486 -187040664 - MER46C DNA MER2_type -174 164 3 335 233 58 0 chr5 12589861 12589947 -187040203 + MER53 DNA DNA 5 95 -94 * 346 198 278 8 chr5 12589873 12589999 -187040151 - MER53 DNA DNA -7 182 23 2092 171 34 8 chr5 12590063 12590443 -187039707 + MLT1B LTR MaLR 1 390 0 1851 144 21 7 chr5 12591097 12591382 -187038768 - AluSx SINE Alu -23 289 1 654 237 19 0 chr5 12591492 12591648 -187038502 - MER20 DNA MER1_type -14 205 47 385 231 189 14 chr5 12592640 12592783 -187037367 - L1M4 LINE L1 -1177 4969 4802 26 64 0 0 chr5 12595406 12595453 -187034697 + AT_rich Low_complexity Low_complexity 1 47 0 216 0 0 0 chr5 12595860 12595884 -187034266 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2199 110 0 22 chr5 12595909 12596228 -187033922 + AluSx SINE Alu 1 312 0 543 53 0 0 chr5 12596228 12596303 -187033847 + (TA)n Simple_repeat Simple_repeat 2 76 0 24 32 0 0 chr5 12597540 12597571 -187032579 + AT_rich Low_complexity Low_complexity 1 31 0 2089 110 45 0 chr5 12598737 12599027 -187031123 + AluSx SINE Alu 1 303 -9 324 94 0 0 chr5 12600255 12600308 -187029842 + (CA)n Simple_repeat Simple_repeat 1 53 0 2424 88 0 25 chr5 12601323 12601640 -187028510 + AluSc SINE Alu 1 309 0 470 273 123 0 chr5 12601640 12601821 -187028329 + L2 LINE L2 2364 2567 -747 351 299 76 28 chr5 12602113 12602226 -187027924 + MIR3 SINE MIR 25 148 -60 2123 115 0 20 chr5 12602226 12602531 -187027619 + AluSx SINE Alu 1 299 -13 351 299 76 28 chr5 12602531 12602561 -187027589 + MIR3 SINE MIR 148 175 -33 266 358 75 11 chr5 12602820 12603007 -187027143 + MIR SINE MIR 24 222 -40 2203 117 0 16 chr5 12603286 12603602 -187026548 + AluSx SINE Alu 2 312 0 215 356 94 48 chr5 12603990 12604608 -187025542 - L2 LINE L2 -349 2965 2320 2690 151 49 31 chr5 12607029 12607584 -187022566 + MER34B LTR ERV1 1 565 0 754 182 0 23 chr5 12610132 12610264 -187019886 - FLAM_C SINE Alu -14 129 1 646 180 0 0 chr5 12611492 12611592 -187018558 + FRAM SINE Alu 45 144 -32 917 200 15 15 chr5 12612055 12612260 -187017890 + MER3 DNA MER1_type 1 205 -4 2200 130 34 6 chr5 12612260 12612614 -187017536 + THE1B LTR MaLR 1 364 0 1715 171 10 10 chr5 12613281 12613573 -187016577 + AluJo SINE Alu 1 292 -20 209 311 134 34 chr5 12613828 12613947 -187016203 + L2 LINE L2 3182 3312 -1 * 225 229 115 21 chr5 12613945 12614041 -187016109 - MIR SINE MIR -68 194 90 309 254 83 55 chr5 12614189 12614370 -187015780 + MIR SINE MIR 71 256 -6 645 257 59 10 chr5 12616078 12616280 -187013870 + L2 LINE L2 1765 1976 -1338 1286 278 78 9 chr5 12616288 12616876 -187013274 + L2 LINE L2 2471 3109 -204 600 228 0 0 chr5 12617034 12617157 -187012993 + FLAM_C SINE Alu 1 123 -20 21 0 0 0 chr5 12617157 12617178 -187012972 + AT_rich Low_complexity Low_complexity 1 21 0 1924 173 0 0 chr5 12617453 12617753 -187012397 + AluJb SINE Alu 1 300 -12 2271 79 0 36 chr5 12618316 12618620 -187011530 - AluSp SINE Alu -20 293 1 40 21 0 0 chr5 12618905 12618952 -187011198 + AT_rich Low_complexity Low_complexity 1 47 0 1930 140 0 0 chr5 12619628 12619906 -187010244 + AluSg SINE Alu 25 302 -8 1822 170 60 0 chr5 12620057 12620375 -187009775 - MER1B DNA MER1_type 0 337 1 282 377 31 13 chr5 12621257 12621416 -187008734 + MIR3 SINE MIR 42 203 -5 346 333 63 0 chr5 12621821 12621932 -187008218 + L2 LINE L2 3153 3270 -2 1990 130 29 0 chr5 12622026 12622362 -187007788 + AluSx SINE Alu 1 344 0 546 268 83 20 chr5 12625669 12625923 -187004227 + L1MC4 LINE L1 6792 7061 -981 283 254 54 82 chr5 12626391 12626781 -187003369 + L1MC5 LINE L1 7311 7689 -272 375 237 38 23 chr5 12626994 12627125 -187003025 - Charlie7 DNA MER1_type -3 2609 2477 283 251 54 92 chr5 12630074 12630313 -186999837 + L2 LINE L2 3084 3313 0 470 261 154 0 chr5 12630583 12630771 -186999379 + MLT1L LTR MaLR 391 607 -8 23 54 0 0 chr5 12631096 12631133 -186999017 + AT_rich Low_complexity Low_complexity 1 37 0 2481 67 0 0 chr5 12631296 12631595 -186998555 + AluY SINE Alu 1 299 -12 27 0 0 0 chr5 12632349 12632376 -186997774 + AT_rich Low_complexity Low_complexity 1 27 0 261 303 290 24 chr5 12632579 12632876 -186997274 - L2 LINE L2 -370 2944 2569 * 268 294 210 63 chr5 12632872 12633020 -186997130 + L2 LINE L2 2915 3040 -273 1646 165 7 65 chr5 12633020 12633329 -186996821 + AluJb SINE Alu 1 291 -21 268 294 210 63 chr5 12633329 12633513 -186996637 + L2 LINE L2 3040 3296 -17 467 106 0 0 chr5 12633625 12633691 -186996459 - Alu SINE Alu -14 298 233 1116 216 163 25 chr5 12634128 12634526 -186995624 + MLT1H LTR MaLR 97 549 0 1768 175 34 3 chr5 12635019 12635311 -186994839 + AluSx SINE Alu 1 301 -11 1619 149 0 0 chr5 12635378 12635640 -186994510 + AluSq SINE Alu 1 262 -51 2366 51 7 0 chr5 12635902 12636197 -186993953 + AluY SINE Alu 1 297 -14 210 224 0 0 chr5 12636470 12636519 -186993631 + CT-rich Low_complexity Low_complexity 3 51 0 252 0 0 0 chr5 12636693 12636721 -186993429 + (A)n Simple_repeat Simple_repeat 1 28 0 1820 174 3 3 chr5 12636725 12637030 -186993120 + AluJo SINE Alu 1 305 -7 2036 125 7 7 chr5 12638456 12638751 -186991399 + AluSx SINE Alu 1 295 -17 361 297 130 20 chr5 12638995 12639241 -186990909 - L1M4 LINE L1 -3657 2489 2217 2112 244 94 13 chr5 12639468 12640170 -186989980 - L1ME3 LINE L1 -35 6110 5352 397 309 0 0 chr5 12640172 12640282 -186989868 + MER8 DNA MER2_type 3 112 -127 636 243 152 77 chr5 12640307 12640800 -186989350 - L1ME3 LINE L1 -797 5332 4803 308 315 116 8 chr5 12641040 12641307 -186988843 - HAL1 LINE L1 -749 1758 1463 332 301 99 33 chr5 12641441 12641654 -186988496 - L1ME3 LINE L1 -4951 1168 942 2110 134 3 0 chr5 12641938 12642237 -186987913 - AluSx SINE Alu -12 300 1 940 113 0 0 chr5 12642298 12642422 -186987728 - AluSg SINE Alu -12 300 177 770 71 0 0 chr5 12642422 12642520 -186987630 - AluSg SINE Alu -212 98 1 2209 117 0 3 chr5 12643841 12644140 -186986010 - AluSx SINE Alu -14 298 1 333 0 0 0 chr5 12644591 12644628 -186985522 + (CA)n Simple_repeat Simple_repeat 2 38 0 718 186 0 0 chr5 12644878 12644996 -186985154 + FLAM_C SINE Alu 1 118 -25 24 0 0 0 chr5 12644996 12645020 -186985130 + AT_rich Low_complexity Low_complexity 1 24 0 2404 64 0 20 chr5 12645024 12645322 -186984828 + AluY SINE Alu 2 293 -18 684 184 56 90 chr5 12645379 12645645 -186984505 + L1MC5 LINE L1 7611 7867 -94 769 231 61 47 chr5 12646353 12646565 -186983585 + MIR SINE MIR 48 262 0 4551 124 15 126 chr5 12648260 12649184 -186980966 - LTR12 LTR ERV1 0 826 5 2851 155 18 26 chr5 12649200 12649808 -186980342 - pTR5 LTR ERV1 -1094 1344 742 917 178 6 12 chr5 12651706 12651869 -186978281 - FRAM SINE Alu -14 162 1 888 201 99 11 chr5 12651880 12652143 -186978007 + Charlie1b DNA MER1_type 109 394 -129 763 252 52 0 chr5 12652767 12652922 -186977228 - AluJo SINE Alu -137 175 13 2316 99 74 42 chr5 12653093 12653446 -186976704 + THE1B LTR MaLR 1 364 0 222 280 220 38 chr5 12653446 12653578 -186976572 - MIR SINE MIR -25 237 82 242 192 0 19 chr5 12654026 12654078 -186976072 - L1M LINE L1 -804 5360 5310 629 120 56 9 chr5 12654251 12654359 -186975791 + L1MB3 LINE L1 6067 6179 -4 1910 155 3 10 chr5 12654383 12654693 -186975457 + AluJo SINE Alu 2 309 -3 2101 195 64 50 chr5 12654741 12655300 -186974850 + L1ME1 LINE L1 5597 6163 -3 975 279 54 56 chr5 12655495 12655812 -186974338 + MLT1I LTR MaLR 3 320 -89 1643 139 12 89 chr5 12655812 12655916 -186974234 - AluJo SINE Alu -13 299 189 1845 139 30 20 chr5 12655916 12656219 -186973931 + AluSx SINE Alu 1 306 -6 1643 139 12 89 chr5 12656219 12656438 -186973712 - AluJo SINE Alu -123 189 1 975 279 54 56 chr5 12656438 12656528 -186973622 + MLT1I LTR MaLR 320 409 0 2210 159 113 13 chr5 12657345 12657775 -186972375 - L1MC3 LINE L1 -8 7777 7297 189 0 0 0 chr5 12657775 12657796 -186972354 + (CATAT)n Simple_repeat Simple_repeat 2 22 0 2210 159 113 13 chr5 12657796 12657825 -186972325 - L1MC3 LINE L1 -488 7297 7272 1474 82 15 0 chr5 12657825 12658020 -186972130 + LTR3b LTR ERVK 1 198 -239 2212 76 32 0 chr5 12658399 12658697 -186971453 + AluSp SINE Alu 1 307 0 232 228 69 59 chr5 12658800 12658888 -186971262 + LTR33A LTR ERVL 59 150 -373 2299 96 3 0 chr5 12658888 12659181 -186970969 + AluSq SINE Alu 1 294 -19 232 228 69 59 chr5 12659181 12659193 -186970957 + LTR33A LTR ERVL 150 160 -363 363 236 172 19 chr5 12659375 12659453 -186970697 + LTR41 LTR ERVL 1 66 -707 180 0 0 0 chr5 12659453 12659473 -186970677 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 363 236 172 19 chr5 12659473 12659551 -186970599 + LTR41 LTR ERVL 66 181 -592 780 181 7 34 chr5 12659727 12659876 -186970274 - L1ME LINE L1 -601 5565 5421 * 3757 201 89 10 chr5 12659874 12661133 -186969017 - L1MB8 LINE L1 -4 6174 4810 873 171 126 31 chr5 12661141 12661585 -186968565 + Charlie1 DNA MER1_type 2186 2760 -1 2414 72 3 0 chr5 12661928 12662221 -186967929 + AluSp SINE Alu 1 294 -19 2396 92 3 0 chr5 12712749 12713052 -186917098 - AluSp SINE Alu -9 304 1 270 318 0 0 chr5 12714108 12714193 -186915957 + MIR SINE MIR 172 256 -6 1518 171 60 21 chr5 12714237 12714518 -186915632 + AluJo SINE Alu 13 304 -8 203 271 24 47 chr5 12715526 12715611 -186914539 + MIR SINE MIR 52 134 -74 859 227 54 111 chr5 12715750 12716120 -186914030 + MLT1A2 LTR MaLR 23 371 -3 529 321 71 12 chr5 12716221 12716461 -186913689 - MIR SINE MIR -2 260 7 2367 95 10 0 chr5 12717329 12717634 -186912516 + AluSx SINE Alu 1 308 -4 257 51 26 0 chr5 12717815 12717854 -186912296 + (TA)n Simple_repeat Simple_repeat 2 41 0 2247 109 3 0 chr5 12717854 12718148 -186912002 - AluSx SINE Alu -17 295 1 21 57 0 0 chr5 12718155 12718190 -186911960 + AT_rich Low_complexity Low_complexity 1 35 0 1086 213 79 136 chr5 12718418 12718962 -186911188 + L1ME3A LINE L1 5653 6165 -5 3608 162 30 2 chr5 12719264 12719870 -186910280 + L1PB4 LINE L1 5529 6151 -5 289 296 130 0 chr5 12719929 12720037 -186910113 + MIR SINE MIR 71 192 -70 437 332 92 18 chr5 12721037 12721320 -186908830 + L1MEd LINE L1 58 361 -5758 1863 230 126 26 chr5 12721354 12721893 -186908257 - MLT1E LTR MaLR 0 593 1 1052 235 238 8 chr5 12721951 12722329 -186907821 - LTR50 LTR ERVL -330 465 1 5153 176 14 7 chr5 12722588 12723634 -186906516 - L1 LINE L1 -743 5403 786 278 282 66 18 chr5 12723637 12723864 -186906286 + HAL1 LINE L1 885 1122 -1385 6231 216 41 29 chr5 12723939 12725376 -186904774 + L1PA13 LINE L1 1 1454 -5333 18307 197 15 12 chr5 12725479 12730066 -186900084 + L1PA13 LINE L1 808 5423 -1374 567 321 83 18 chr5 12730097 12730315 -186899835 - MIR SINE MIR -3 259 28 788 163 105 17 chr5 12730331 12730503 -186899647 - MER20 DNA MER1_type 0 219 33 199 315 212 7 chr5 12730608 12730754 -186899396 + MIR3 SINE MIR 25 200 -8 23386 177 29 22 chr5 12731298 12737470 -186892680 - L1PA11 LINE L1 -3 6486 287 352 250 5 162 chr5 12737944 12738160 -186891990 + MIR3 SINE MIR 19 200 -8 2163 118 0 0 chr5 12739400 12739689 -186890461 + AluSx SINE Alu 22 310 -2 23 33 0 0 chr5 12740607 12740637 -186889513 + AT_rich Low_complexity Low_complexity 1 30 0 221 319 77 0 chr5 12741618 12741709 -186888441 + L2 LINE L2 3163 3260 -12 259 233 0 33 chr5 12742268 12742328 -186887822 - HsTC2 DNA Tc2 -1808 90 33 16459 121 23 11 chr5 12742336 12742516 -186887634 - Tigger1 DNA MER2_type 0 2418 2242 2483 74 0 0 chr5 12742516 12742814 -186887336 - AluY SINE Alu -13 298 1 16459 121 23 11 chr5 12742814 12745021 -186885129 - Tigger1 DNA MER2_type -176 2242 1 2300 91 3 0 chr5 12745624 12745921 -186884229 + AluSp SINE Alu 1 298 -15 210 228 0 70 chr5 12746360 12746417 -186883733 + L2 LINE L2 3261 3313 0 250 286 98 90 chr5 12747669 12747802 -186882348 + L2 LINE L2 3138 3271 -1 22 56 0 0 chr5 12747867 12747903 -186882247 + AT_rich Low_complexity Low_complexity 1 36 0 360 241 34 23 chr5 12747941 12748046 -186882104 + MIR SINE MIR 21 126 -82 633 232 10 63 chr5 12748067 12748274 -186881876 + L2 LINE L2 2692 2887 -427 940 87 16 0 chr5 12748661 12748788 -186881362 - AluSg/x SINE Alu -8 304 176 373 202 219 0 chr5 12748934 12749048 -186881102 + L2 LINE L2 3175 3313 0 526 301 63 49 chr5 12749944 12750944 -186879206 + L1MC5 LINE L1 4431 5446 -743 1059 192 25 70 chr5 12750946 12751232 -186878918 + L1MC5 LINE L1 6919 7191 -770 1715 257 95 55 chr5 12751272 12752446 -186877704 + L1MC5 LINE L1 5612 6738 -1223 2401 139 27 61 chr5 12752446 12752920 -186877230 + L1MB8 LINE L1 5721 6178 0 1715 257 95 55 chr5 12752920 12753081 -186877069 + L1MC5 LINE L1 6738 6891 -1070 1336 201 15 96 chr5 12753081 12753478 -186876672 + MLT1A1 LTR MaLR 1 365 0 1715 257 95 55 chr5 12753478 12753662 -186876488 + L1MC5 LINE L1 6891 7209 -752 287 190 130 60 chr5 12753708 12753761 -186876389 + MER58C DNA MER1_type 91 139 -2281 2183 121 32 27 chr5 12753761 12754134 -186876016 - THE1C LTR MaLR 0 375 1 287 190 130 60 chr5 12754134 12754180 -186875970 + MER58C DNA MER1_type 139 197 -18 257 287 90 42 chr5 12754384 12754551 -186875599 + LTR16A1 LTR ERVL 270 444 -13 203 176 0 0 chr5 12755033 12755067 -186875083 + A-rich Low_complexity Low_complexity 1 34 0 2317 201 122 29 chr5 12756003 12756093 -186874057 - MER50 LTR ERV1 0 734 654 2234 121 0 0 chr5 12756093 12756398 -186873752 + AluSc SINE Alu 1 305 -4 2317 201 122 29 chr5 12756398 12756970 -186873180 - MER50 LTR ERV1 -80 654 10 187 293 43 86 chr5 12756980 12757260 -186872890 - L2 LINE L2 -180 3092 2825 2130 156 18 8 chr5 12757374 12757759 -186872391 - MLT1B LTR MaLR 0 390 2 23 0 0 0 chr5 12758189 12758212 -186871938 + AT_rich Low_complexity Low_complexity 1 23 0 255 352 0 0 chr5 12758515 12758603 -186871547 + MIR SINE MIR 170 257 -5 1269 272 115 29 chr5 12758663 12758856 -186871294 + MLT1L LTR MaLR 5 180 -435 1642 187 169 26 chr5 12758856 12759240 -186870910 + MLT2B1 LTR ERVL 1 461 -59 180 77 0 0 chr5 12759240 12759266 -186870884 + (CA)n Simple_repeat Simple_repeat 2 27 0 1642 187 169 26 chr5 12759266 12759336 -186870814 + MLT2B1 LTR ERVL 461 520 0 1269 272 115 29 chr5 12759336 12759700 -186870450 + MLT1L LTR MaLR 180 610 -5 244 343 18 41 chr5 12760304 12760473 -186869677 - MIR SINE MIR -50 212 48 2248 93 0 0 chr5 12761055 12761333 -186868817 + AluSx SINE Alu 1 278 -34 1396 131 0 0 chr5 12761864 12762063 -186868087 - AluSg/x SINE Alu -3 307 109 263 156 22 0 chr5 12762958 12763003 -186867147 + MER106B DNA MER1_type 2 47 -1012 609 194 25 50 chr5 12763059 12763219 -186866931 + MER106B DNA MER1_type 904 1059 0 423 163 175 50 chr5 12763539 12763699 -186866451 - MER104 DNA MER2_type 0 180 1 390 252 0 10 chr5 12763800 12763903 -186866247 - MIR SINE MIR -107 155 54 3512 155 18 8 chr5 12764217 12764830 -186865320 - L1MA5 LINE L1 -26 6274 5656 474 18 0 0 chr5 12764831 12764886 -186865264 + (TG)n Simple_repeat Simple_repeat 2 56 0 1161 191 65 0 chr5 12764886 12765101 -186865049 - AluJo SINE Alu -25 287 59 1006 132 13 0 chr5 12765103 12765255 -186864895 - L1MA5 LINE L1 -636 5667 5514 642 53 0 0 chr5 12765255 12765331 -186864819 + AluY SINE Alu 75 150 -161 1875 24 0 0 chr5 12765332 12765541 -186864609 + L1P LINE L1 4047 4255 -1891 * 27274 80 5 7 chr5 12765538 12767880 -186862270 - L1P LINE L1 -2529 3617 1284 2482 72 0 0 chr5 12767880 12768173 -186861977 + AluY SINE Alu 1 293 -18 27274 80 5 7 chr5 12768173 12769425 -186860725 - L1P LINE L1 -4862 1284 31 3733 199 60 7 chr5 12769430 12770185 -186859965 - L1M2b LINE L1 -6414 795 1 195 313 52 42 chr5 12770242 12770338 -186859812 + MIR SINE MIR 38 134 -74 647 265 11 42 chr5 12771669 12771858 -186858292 - MER63A DNA MER1_type -14 196 14 527 316 0 37 chr5 12772047 12772234 -186857916 + (TG)n Simple_repeat Simple_repeat 1 180 0 512 288 45 5 chr5 12772880 12773081 -186857069 - MIR SINE MIR -22 240 33 2271 85 0 0 chr5 12774418 12774723 -186855427 + AluY SINE Alu 1 305 0 867 245 42 0 chr5 12774946 12775158 -186854992 - MER58A DNA MER1_type 0 224 4 854 208 38 6 chr5 12776431 12776614 -186853536 - MER5A DNA MER1_type 0 189 1 926 237 37 0 chr5 12776623 12776838 -186853312 - MER58A DNA MER1_type -1 223 1 259 226 216 10 chr5 12777173 12777275 -186852875 + L2 LINE L2 3190 3312 -1 1105 189 77 6 chr5 12777747 12778070 -186852080 + L1MB1 LINE L1 5733 6168 0 280 98 0 5 chr5 12778708 12778746 -186851404 - MLT2C1 LTR ERVL -2 395 369 351 0 0 0 chr5 12778746 12778785 -186851365 + (TG)n Simple_repeat Simple_repeat 1 39 0 280 98 0 5 chr5 12778785 12778797 -186851353 - MLT2C1 LTR ERVL -28 369 358 287 152 14 0 chr5 12778802 12778876 -186851274 - MLT2D LTR ERVL -19 445 321 994 211 0 5 chr5 12778882 12779086 -186851064 - MLT2D LTR ERVL -211 203 1 568 198 62 68 chr5 12780175 12780352 -186849798 + L1MC3 LINE L1 7248 7423 -362 230 272 0 43 chr5 12780389 12780481 -186849669 + L1ME4a LINE L1 5970 6057 -64 23 68 0 0 chr5 12780514 12780558 -186849592 + AT_rich Low_complexity Low_complexity 1 44 0 210 224 0 0 chr5 12781269 12781318 -186848832 + (TG)n Simple_repeat Simple_repeat 2 50 0 2104 140 81 21 chr5 12781547 12781919 -186848231 - MSTD LTR MaLR 0 396 3 325 267 19 29 chr5 12782363 12782468 -186847682 - MIR SINE MIR -75 187 84 1410 170 0 44 chr5 12782592 12782863 -186847287 + AluSx SINE Alu 54 312 0 584 278 188 39 chr5 12783441 12783714 -186846436 - L2 LINE L2 -15 3298 3067 1739 183 65 3 chr5 12783714 12784037 -186846113 - MER61A LTR ERV1 0 343 1 584 278 188 39 chr5 12784037 12784183 -186845967 - L2 LINE L2 -246 3067 2791 471 305 60 60 chr5 12784243 12784594 -186845556 - MLT1J LTR MaLR -67 444 94 3992 135 44 44 chr5 12784815 12785524 -186844626 - MER50 LTR ERV1 -23 711 3 779 221 32 40 chr5 12785697 12785946 -186844204 - HsTC2 DNA Tc2 -7 1891 1645 226 237 0 51 chr5 12786033 12786092 -186844058 - HsTC2 DNA Tc2 -1748 150 95 575 287 106 56 chr5 12786327 12786828 -186843322 - L2 LINE L2 -1034 2280 1755 2473 151 121 29 chr5 12787006 12787561 -186842589 - MER4B LTR ERV1 -4 606 1 220 283 33 0 chr5 12787920 12787980 -186842170 + C-rich Low_complexity Low_complexity 5 66 0 303 28 0 0 chr5 12787980 12788016 -186842134 + (CCCCCG)n Simple_repeat Simple_repeat 1 36 0 23 0 0 0 chr5 12788143 12788166 -186841984 + GC_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 12788192 12788222 -186841928 + GC_rich Low_complexity Low_complexity 1 30 0 29 47 0 0 chr5 12788442 12788485 -186841665 + GC_rich Low_complexity Low_complexity 1 43 0 2259 103 0 13 chr5 12789348 12789658 -186840492 + AluSx SINE Alu 1 306 -6 1926 118 15 0 chr5 12790202 12790465 -186839685 - AluSx SINE Alu -12 300 34 185 269 0 45 chr5 12790668 12790735 -186839415 + MIR3 SINE MIR 92 155 -53 21 0 0 0 chr5 12791175 12791196 -186838954 + AT_rich Low_complexity Low_complexity 1 21 0 231 203 47 0 chr5 12791708 12791772 -186838378 - MIR SINE MIR -14 248 182 2072 122 3 3 chr5 12791829 12792123 -186838027 + AluSq SINE Alu 1 294 -19 1713 167 27 10 chr5 12793244 12793537 -186836613 - AluJb SINE Alu -14 298 1 267 140 53 18 chr5 12793733 12793790 -186836360 - MLT1J2 LTR MaLR -23 427 369 1944 140 48 70 chr5 12793950 12794364 -186835786 - MLT1D LTR MaLR -3 502 98 246 225 0 70 chr5 12794411 12794482 -186835668 - MLT1D LTR MaLR -517 109 44 476 278 50 22 chr5 12796510 12796690 -186833460 - MIR SINE MIR 0 262 78 231 257 0 0 chr5 12796690 12796764 -186833386 + (CA)n Simple_repeat Simple_repeat 1 74 0 254 200 27 80 chr5 12796764 12796839 -186833311 - MIR SINE MIR -136 72 2 1749 178 39 21 chr5 12797451 12797834 -186832316 - MLT1B LTR MaLR 0 390 1 642 305 147 32 chr5 12798279 12798873 -186831277 + L1MEd LINE L1 350 1011 -5108 180 344 120 8 chr5 12799399 12799524 -186830626 - MIR SINE MIR -79 183 45 180 0 0 0 chr5 12799638 12799658 -186830492 + (A)n Simple_repeat Simple_repeat 1 20 0 321 326 34 7 chr5 12799658 12799805 -186830345 - MER103 DNA DNA 0 166 16 3602 191 56 3 chr5 12799842 12800591 -186829559 + L1MB7 LINE L1 5395 6183 -1 325 322 54 13 chr5 12802307 12802456 -186827694 - MIR SINE MIR -60 202 48 2150 108 0 3 chr5 12802775 12803080 -186827070 + AluSx SINE Alu 3 306 -6 256 211 135 0 chr5 12803299 12803351 -186826799 - MER46C DNA MER2_type -86 252 194 298 272 117 0 chr5 12803403 12803506 -186826644 - MER46C DNA MER2_type -223 115 1 319 273 28 128 chr5 12804291 12804580 -186825570 - MIR SINE MIR 0 262 3 427 318 95 14 chr5 12804585 12804796 -186825354 - MIR SINE MIR -17 245 18 4205 211 47 75 chr5 12805843 12806439 -186823711 + L1MC4a LINE L1 5974 6585 -1223 309 51 0 0 chr5 12806439 12806478 -186823672 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 4205 211 47 75 chr5 12806478 12806856 -186823294 + L1MC4a LINE L1 6585 6904 -904 2092 99 27 0 chr5 12806856 12807150 -186823000 - AluSq SINE Alu -11 302 1 4205 211 47 75 chr5 12807150 12807495 -186822655 + L1MC4a LINE L1 6904 7257 -551 837 231 29 63 chr5 12807501 12807739 -186822411 + MER82 DNA MER2_type 424 653 0 232 175 0 0 chr5 12807740 12807780 -186822370 + MER58 DNA MER1_type 2378 2417 -3 1567 278 118 50 chr5 12807784 12807920 -186822230 - L1MCc LINE L1 -4355 2767 2642 727 204 22 113 chr5 12807920 12808042 -186822108 + MER63A DNA MER1_type 2 95 -1593 1723 171 0 7 chr5 12808042 12808334 -186821816 - AluJb SINE Alu -22 290 1 727 204 22 113 chr5 12808334 12808441 -186821709 + MER63A DNA MER1_type 95 210 0 1567 278 118 50 chr5 12808441 12809582 -186820568 - L1MCc LINE L1 -4480 2642 1195 297 0 0 0 chr5 12809582 12809615 -186820535 + (TG)n Simple_repeat Simple_repeat 1 33 0 1567 278 118 50 chr5 12809615 12809813 -186820337 - L1MCc LINE L1 -5927 1195 1012 2819 221 67 54 chr5 12810025 12810172 -186819978 - L1MC3 LINE L1 0 8042 7898 2261 100 0 0 chr5 12810172 12810482 -186819668 - AluY SINE Alu -1 310 1 2819 221 67 54 chr5 12810482 12811191 -186818959 - L1MC3 LINE L1 -144 7898 7179 2190 155 52 47 chr5 12811191 12811656 -186818494 - MLT1C LTR MaLR 0 467 1 2819 221 67 54 chr5 12811656 12811674 -186818476 - L1MC3 LINE L1 -863 7179 7163 2238 99 3 3 chr5 12812027 12812339 -186817811 - AluSx SINE Alu 0 312 1 1949 177 88 18 chr5 12813104 12813538 -186816612 - MLT1C LTR MaLR -3 464 1 475 209 73 47 chr5 12813739 12813930 -186816220 - Charlie7 DNA MER1_type 0 2612 2417 * 972 215 85 38 chr5 12813923 12814263 -186815887 - Charlie7 DNA MER1_type -1891 721 366 279 159 14 29 chr5 12814489 12814558 -186815592 - Charlie7 DNA MER1_type -2462 150 83 233 280 149 47 chr5 12815849 12815956 -186814194 - MIR3 SINE MIR -3 205 88 2778 161 36 6 chr5 12816037 12816195 -186813955 + L1MB2 LINE L1 5632 5784 -387 474 18 0 0 chr5 12816195 12816250 -186813900 + (CA)n Simple_repeat Simple_repeat 2 56 0 2778 161 36 6 chr5 12816250 12816612 -186813538 + L1MB2 LINE L1 5784 6168 -3 2912 172 61 19 chr5 12816640 12817228 -186812922 + L1MB5 LINE L1 5562 6174 0 344 243 168 23 chr5 12817553 12817726 -186812424 - MLT1L LTR MaLR -240 375 178 361 349 47 31 chr5 12819127 12819319 -186810831 - L2 LINE L2 0 3313 3119 200 205 0 0 chr5 12820551 12820590 -186809560 + CT-rich Low_complexity Low_complexity 1 39 0 2137 131 6 50 chr5 12821301 12821661 -186808489 - MER2 DNA MER2_type 0 344 1 182 258 76 91 chr5 12821667 12821865 -186808285 + L2 LINE L2 2312 2506 -808 374 280 88 102 chr5 12822207 12822729 -186807421 + LTR40b LTR ERVL 3 460 -2 346 271 205 7 chr5 12822887 12823038 -186807112 - MER5A DNA MER1_type -7 182 2 284 291 122 58 chr5 12823459 12823648 -186806502 - MIR SINE MIR -48 214 14 194 208 75 0 chr5 12824887 12824940 -186805210 + MIR SINE MIR 81 137 -125 186 324 95 0 chr5 12825989 12826063 -186804087 + MIR SINE MIR 23 103 -105 371 237 54 0 chr5 12826768 12826880 -186803270 - L1MC3 LINE L1 -1139 6703 6571 * 390 204 45 9 chr5 12826780 12826891 -186803259 + L1MC4 LINE L1 1995 6983 -1339 2866 92 25 10 chr5 12826903 12827296 -186802854 - MLT2A1 LTR ERVL -45 399 1 14079 67 19 8 chr5 12827296 12829068 -186801082 - HERVL-A1 LTR ERVL 0 5654 3865 1234 72 0 0 chr5 12829067 12829219 -186800931 + HERVL LTR ERVL 3394 3545 -2109 * 444 80 93 40 chr5 12829216 12829291 -186800859 - HERVL-A1 LTR ERVL -5371 283 205 * 19709 72 2 1 chr5 12829307 12831722 -186798428 - HERVL-A1 LTR ERVL -1775 3879 1462 6856 62 7 2 chr5 12831721 12832571 -186797579 - HERVL-A1 LTR ERVL -4800 854 1 * 3086 76 25 36 chr5 12832571 12833020 -186797130 - MLT2A1 LTR ERVL 0 444 1 2353 132 43 31 chr5 12834360 12834783 -186795367 - MSTA LTR MaLR 0 428 1 907 230 104 77 chr5 12834899 12835264 -186794886 - Charlie4a DNA MER1_type -132 376 2 301 284 58 8 chr5 12835730 12835869 -186794281 + MIR SINE MIR 12 147 -61 246 293 0 61 chr5 12836258 12836335 -186793815 - Charlie4 DNA MER1_type -372 136 65 330 87 0 0 chr5 12836335 12836381 -186793769 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 246 293 0 61 chr5 12836381 12836402 -186793748 - Charlie4 DNA MER1_type -443 65 44 2254 145 26 0 chr5 12837064 12837416 -186792734 - MLT1B LTR MaLR 0 390 30 210 345 35 0 chr5 12839016 12839103 -186791047 + MIR SINE MIR 56 145 -63 311 277 122 34 chr5 12839380 12839528 -186790622 - MER5A DNA MER1_type -9 180 20 311 271 0 0 chr5 12840780 12840850 -186789300 - MER112 DNA MER1_type -8 252 183 728 169 0 6 chr5 12840934 12841094 -186789056 + (TG)n Simple_repeat Simple_repeat 2 160 0 243 161 21 140 chr5 12841097 12841190 -186788960 - MER112 DNA MER1_type -177 83 2 264 270 5 63 chr5 12841665 12841854 -186788296 + (CACAC)n Simple_repeat Simple_repeat 1 178 0 855 295 33 0 chr5 12842923 12843164 -186786986 + MIR SINE MIR 14 262 0 365 240 88 0 chr5 12844240 12844365 -186785785 + MER103 DNA DNA 24 159 -7 1011 225 51 0 chr5 12845054 12845290 -186784860 + MER46C DNA MER2_type 80 327 -11 211 321 95 12 chr5 12847190 12847274 -186782876 - L2 LINE L2 -15 3257 3167 360 242 11 11 chr5 12847595 12847690 -186782460 + MER94 DNA DNA 40 134 0 24 0 0 0 chr5 12847815 12847839 -186782311 + AT_rich Low_complexity Low_complexity 1 24 0 182 298 18 0 chr5 12848695 12848752 -186781398 + L2 LINE L2 3200 3257 -15 264 59 0 0 chr5 12850194 12850228 -186779922 + (TAGG)n Simple_repeat Simple_repeat 2 35 0 2296 138 122 9 chr5 12850229 12850655 -186779495 + MER101 LTR ERV1 1 474 0 225 0 0 0 chr5 12851096 12851121 -186779029 + (T)n Simple_repeat Simple_repeat 1 25 0 270 293 123 0 chr5 12852790 12852896 -186777254 - MIR SINE MIR -38 224 106 279 79 0 0 chr5 12854981 12855019 -186775131 + (TG)n Simple_repeat Simple_repeat 1 38 0 351 338 63 0 chr5 12855034 12855176 -186774974 - MIR SINE MIR -90 172 22 341 321 78 55 chr5 12855739 12855957 -186774193 + MIR SINE MIR 39 261 -1 297 75 0 0 chr5 12856250 12856290 -186773860 + (TG)n Simple_repeat Simple_repeat 2 41 0 344 243 243 5 chr5 12856706 12856895 -186773255 + L3 LINE CR1 1061 1294 -283 302 242 53 0 chr5 12857141 12857236 -186772914 + Charlie5 DNA MER1_type 2411 2510 -102 3600 168 58 30 chr5 12858371 12859080 -186771070 + L1MB3 LINE L1 5423 6151 -32 13896 117 31 18 chr5 12860831 12861188 -186768962 - Tigger1 DNA MER2_type 0 2418 2067 2196 137 0 13 chr5 12861188 12861503 -186768647 + AluSx SINE Alu 1 311 -1 13896 117 31 18 chr5 12861503 12863458 -186766692 - Tigger1 DNA MER2_type -351 2067 6 375 268 89 40 chr5 12864672 12864896 -186765254 + L1ME4a LINE L1 5804 6038 -83 1887 155 24 0 chr5 12865280 12865576 -186764574 + AluJo SINE Alu 1 303 -9 1594 224 46 30 chr5 12870944 12871404 -186758746 - MLT1C LTR MaLR 0 467 1 3517 145 55 66 chr5 12871800 12872613 -186757537 + L1MB8 LINE L1 5369 6172 -6 227 303 30 15 chr5 12872620 12872686 -186757464 - MIR SINE MIR -170 92 26 214 256 39 51 chr5 12874002 12874080 -186756070 - MIR SINE MIR -91 171 95 221 0 0 33 chr5 12876132 12876162 -186753988 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr5 12876325 12876347 -186753803 + (TG)n Simple_repeat Simple_repeat 2 23 0 1862 187 11 11 chr5 12876383 12876747 -186753403 - MLT2D LTR ERVL -45 369 6 347 167 0 17 chr5 12877277 12877337 -186752813 + MER20 DNA MER1_type 1 59 -160 222 280 97 0 chr5 12877939 12878032 -186752118 + L2 LINE L2 3159 3260 -12 251 261 23 51 chr5 12879144 12879320 -186750830 + (CCGCG)n Simple_repeat Simple_repeat 4 174 0 251 261 23 51 chr5 12879485 12879661 -186750489 + (CCGCG)n Simple_repeat Simple_repeat 4 174 0 342 0 0 0 chr5 12881208 12881246 -186748904 + (TG)n Simple_repeat Simple_repeat 2 39 0 757 203 13 48 chr5 12881603 12881830 -186748320 - MER20 DNA MER1_type 0 219 1 1669 182 10 26 chr5 12882040 12882342 -186747808 - AluJo SINE Alu -15 297 1 2186 131 13 0 chr5 12883916 12884214 -186745936 + AluSx SINE Alu 1 302 -10 276 278 208 17 chr5 12884425 12884598 -186745552 + MIR SINE MIR 1 206 -56 1916 232 44 3 chr5 12884609 12885263 -186744887 + L1MC3 LINE L1 7051 7785 0 2361 100 3 0 chr5 12885273 12885574 -186744576 + AluSc SINE Alu 1 302 -7 2337 98 0 16 chr5 12885584 12885901 -186744249 + AluSx SINE Alu 1 312 0 3706 165 19 15 chr5 12886504 12887221 -186742929 + MER72 LTR ERV1 2 721 -1 1834 123 155 37 chr5 12887393 12887774 -186742376 + MER39B LTR ERV1 1 426 -227 1112 141 12 0 chr5 12887774 12887944 -186742206 - AluSg/x SINE Alu -4 308 137 1026 152 20 50 chr5 12887945 12888143 -186742007 + MER39B LTR ERV1 434 625 -28 382 354 125 12 chr5 12888707 12889301 -186740849 + L2 LINE L2 1867 2527 -787 395 182 0 0 chr5 12889306 12889372 -186740778 + AluJb SINE Alu 60 125 -177 196 316 152 38 chr5 12889452 12889768 -186740382 + L2 LINE L2 2626 2977 -337 584 136 32 136 chr5 12890033 12890188 -186739962 + AluJo SINE Alu 5 143 -169 2364 89 0 3 chr5 12890189 12890480 -186739670 + AluSq SINE Alu 1 290 -23 340 332 40 15 chr5 12891821 12892023 -186738127 + MLT1L LTR MaLR 188 394 -221 194 289 13 26 chr5 12892966 12893042 -186737108 - L2 LINE L2 -9 3304 3230 601 246 7 0 chr5 12893700 12893842 -186736308 + MER5A DNA MER1_type 7 149 -40 219 196 0 36 chr5 12894217 12894241 -186735909 + GA-rich Low_complexity Low_complexity 2 25 -30 2253 131 0 0 chr5 12894241 12894553 -186735597 + AluSx SINE Alu 1 312 0 219 196 0 36 chr5 12894553 12894584 -186735566 + GA-rich Low_complexity Low_complexity 25 55 0 644 249 35 0 chr5 12895047 12895216 -186734934 + MLT1A1 LTR MaLR 1 175 -190 189 121 0 0 chr5 12895849 12895882 -186734268 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1198 143 36 41 chr5 12896571 12896889 -186733261 - MLT1A2 LTR MaLR -11 363 1 606 230 142 13 chr5 12896897 12897123 -186733027 + LTR37B LTR ERV1 210 464 -4 1773 286 163 11 chr5 12897129 12898001 -186732149 + L1MC4a LINE L1 6422 7425 -383 1010 310 138 20 chr5 12900512 12901452 -186728698 - L2 LINE L2 -14 3299 2241 1141 183 34 16 chr5 12901493 12901773 -186728377 + MLT1A1 LTR MaLR 36 345 -51 443 189 95 0 chr5 12901773 12901868 -186728282 + MLT1A1 LTR MaLR 260 363 -2 2228 121 10 0 chr5 12902087 12902385 -186727765 - AluSq SINE Alu -12 301 1 370 335 23 36 chr5 12903094 12903395 -186726755 - L1ME4a LINE L1 -240 5881 5585 2315 108 3 0 chr5 12903769 12904065 -186726085 - AluSq SINE Alu -16 297 1 717 170 0 0 chr5 12904100 12904206 -186725944 + FLAM_C SINE Alu 2 107 -36 1742 196 54 39 chr5 12904265 12904643 -186725507 + MLT2D LTR ERVL 1 387 -27 324 0 0 0 chr5 12904643 12904679 -186725471 + (CA)n Simple_repeat Simple_repeat 2 37 0 1742 196 54 39 chr5 12904679 12904708 -186725442 + MLT2D LTR ERVL 387 414 0 2233 98 0 3 chr5 12904755 12905041 -186725109 - AluSc SINE Alu -14 295 11 1768 67 0 27 chr5 12905165 12905388 -186724762 + AluY SINE Alu 86 302 -9 1991 160 83 3 chr5 12906140 12906478 -186723672 + MLT1A1 LTR MaLR 1 365 0 2110 101 7 0 chr5 12907602 12907903 -186722247 - AluSq SINE Alu 0 307 5 1074 171 63 15 chr5 12908207 12908412 -186721738 - MER20 DNA MER1_type -4 215 1 528 304 69 11 chr5 12908444 12908734 -186721416 - L1ME4a LINE L1 -658 5584 5285 2136 152 0 0 chr5 12908734 12909043 -186721107 - AluSx SINE Alu -3 309 1 528 304 69 11 chr5 12909043 12909061 -186721089 - L1ME4a LINE L1 -957 5285 5269 989 173 146 48 chr5 12909072 12909121 -186721029 - MER33 DNA MER1_type -2261 324 281 1757 144 47 0 chr5 12909121 12909399 -186720751 - AluJb SINE Alu -21 291 1 989 173 146 48 chr5 12909399 12909644 -186720506 - MER33 DNA MER1_type -2304 281 1 338 200 14 0 chr5 12909684 12909754 -186720396 + MER96 DNA MER1_type? 1 71 -104 2007 136 0 29 chr5 12910295 12910603 -186719547 - AluSx SINE Alu -13 299 1 887 270 58 52 chr5 12911133 12911496 -186718654 + MLT1I LTR MaLR 40 404 -5 1529 161 0 50 chr5 12911639 12911962 -186718188 + AluSq SINE Alu 1 307 -6 427 107 0 0 chr5 12912065 12912121 -186718029 - Alu SINE Alu -256 57 2 32 57 0 0 chr5 12912180 12912233 -186717917 + AT_rich Low_complexity Low_complexity 1 53 0 2361 116 0 0 chr5 12912746 12913057 -186717093 + AluSq SINE Alu 1 311 -2 2176 206 46 17 chr5 12913205 12913724 -186716426 + MLT1F LTR MaLR 1 534 -8 26 50 0 0 chr5 12913869 12913909 -186716241 + AT_rich Low_complexity Low_complexity 1 40 0 237 65 0 0 chr5 12914033 12914064 -186716086 + (T)n Simple_repeat Simple_repeat 1 31 0 2164 136 0 3 chr5 12914082 12914384 -186715766 + AluSx SINE Alu 1 301 -11 2344 88 10 0 chr5 12914384 12914678 -186715472 + AluSq SINE Alu 1 298 -15 21 36 0 0 chr5 12914690 12914718 -186715432 + AT_rich Low_complexity Low_complexity 1 28 0 2172 129 0 0 chr5 12915012 12915306 -186714844 + AluSx SINE Alu 1 294 -18 2094 138 0 3 chr5 12915461 12915759 -186714391 + AluJb SINE Alu 1 297 -15 490 167 0 0 chr5 12916213 12916297 -186713853 + MER5A DNA MER1_type 9 92 -97 2920 217 60 11 chr5 12917653 12918389 -186711761 + L1ME2 LINE L1 5384 6155 -9 3509 185 44 39 chr5 12918426 12919244 -186710906 + L1MB4 LINE L1 5358 6179 -1 1440 211 33 18 chr5 12919327 12919663 -186710487 + L1ME2 LINE L1 5814 6154 -10 850 168 8 0 chr5 12919672 12919803 -186710347 - FLAM_C SINE Alu 0 133 2 800 181 0 8 chr5 12919834 12919967 -186710183 + FLAM_C SINE Alu 1 132 -1 195 42 0 0 chr5 12919979 12920003 -186710147 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2290 126 0 0 chr5 12920008 12920318 -186709832 + AluSx SINE Alu 1 310 -2 737 196 0 0 chr5 12920712 12920865 -186709285 - L1P LINE L1 -3332 2814 2662 5322 169 9 3 chr5 12920977 12921960 -186708190 - L1P LINE L1 -3678 2468 1480 2477 107 26 31 chr5 12921961 12922352 -186707798 + L1PA11 LINE L1 5786 6174 0 616 226 16 45 chr5 12922894 12923242 -186706908 + MLT1C LTR MaLR 1 459 -8 2291 84 40 7 chr5 12923981 12924280 -186705870 + AluSp SINE Alu 1 309 -4 2011 95 21 67 chr5 12925844 12926171 -186703979 - AluSx SINE Alu 0 312 1 234 0 0 0 chr5 12926400 12926426 -186703724 + (CA)n Simple_repeat Simple_repeat 2 27 0 195 42 0 0 chr5 12926475 12926499 -186703651 + (CATA)n Simple_repeat Simple_repeat 2 25 0 334 296 48 48 chr5 12926671 12926857 -186703293 + L1MC/D LINE L1 5262 5447 -2548 927 194 0 7 chr5 12927039 12927331 -186702819 + (CAT)n Simple_repeat Simple_repeat 1 290 0 639 181 0 53 chr5 12927335 12927523 -186702627 + (CACCAT)n Simple_repeat Simple_repeat 2 179 0 455 250 276 0 chr5 12927555 12927707 -186702443 - MIR SINE MIR -11 251 58 687 295 83 32 chr5 12928319 12928750 -186701400 + MLT1J LTR MaLR 17 469 -42 513 340 25 0 chr5 12928751 12928910 -186701240 + MIR SINE MIR 5 167 -95 226 234 0 0 chr5 12929001 12929048 -186701102 + (ATG)n Simple_repeat Simple_repeat 2 48 0 1866 162 3 3 chr5 12929213 12929503 -186700647 + AluJb SINE Alu 1 290 -22 661 279 122 20 chr5 12930224 12930518 -186699632 + MER77 LTR ERV1 275 598 -7 1888 113 52 78 chr5 12931560 12931906 -186698244 - MER1B DNA MER1_type 0 337 1 39 60 0 0 chr5 12933289 12933356 -186696794 + AT_rich Low_complexity Low_complexity 1 67 0 311 220 93 34 chr5 12934264 12934382 -186695768 - MIR SINE MIR -115 147 23 410 341 153 27 chr5 12934646 12934980 -186695170 - L2 LINE L2 -416 2898 2523 1027 253 78 13 chr5 12935142 12935514 -186694636 + LTR53 LTR ERVL 94 489 -30 1123 248 68 42 chr5 12935612 12936067 -186694083 + MLT1C LTR MaLR 1 467 0 491 169 0 0 chr5 12936067 12936150 -186694000 - MER5A DNA MER1_type -103 86 4 236 240 27 77 chr5 12937912 12938095 -186692055 + L1MC4a LINE L1 5038 5211 -935 2237 88 58 0 chr5 12938173 12938468 -186691682 + AluSx SINE Alu 1 312 0 366 263 62 56 chr5 12938489 12938649 -186691501 + L1MC4a LINE L1 5287 5447 -2361 400 327 70 32 chr5 12938654 12938966 -186691184 + L1MC4a LINE L1 5505 5828 -1980 182 222 44 0 chr5 12945099 12945144 -186685006 - MER5B DNA MER1_type -2 176 130 223 83 21 42 chr5 12947271 12947319 -186682831 + (CCCCAG)n Simple_repeat Simple_repeat 2 48 0 22 35 0 0 chr5 12947610 12947639 -186682511 + GC_rich Low_complexity Low_complexity 1 29 0 1340 148 76 0 chr5 12948359 12948595 -186681555 - AluJo SINE Alu -58 254 1 2460 72 3 0 chr5 12948673 12948966 -186681184 - AluSp SINE Alu -19 294 1 2053 170 3 27 chr5 12949438 12949814 -186680336 + MLT2C1 LTR ERVL 1 367 -30 2086 117 3 17 chr5 12950035 12950334 -186679816 + AluSx SINE Alu 1 295 -17 1163 166 47 14 chr5 12951371 12951582 -186678568 - MER20 DNA MER1_type 0 219 2 323 162 33 61 chr5 12951849 12951967 -186678183 + MLT1L LTR MaLR 389 607 -8 441 236 73 48 chr5 12952468 12952633 -186677517 + LTR16C LTR ERVL 300 468 -23 2226 102 0 13 chr5 12953597 12953910 -186676240 - AluSx SINE Alu -3 309 1 1123 186 28 19 chr5 12954024 12954239 -186675911 + MER20 DNA MER1_type 1 217 -2 2114 127 0 0 chr5 12954241 12954549 -186675601 + AluSg SINE Alu 1 308 -2 446 301 60 4 chr5 12954738 12954982 -186675168 - MIR SINE MIR 0 262 8 328 261 58 87 chr5 12955774 12955915 -186674235 + L1MD3 LINE L1 7564 7697 -298 2306 74 7 7 chr5 12955915 12956224 -186673926 + AluSg SINE Alu 1 309 -1 328 261 58 87 chr5 12956224 12956323 -186673827 + L1MD3 LINE L1 7697 7797 -198 1495 191 79 9 chr5 12956371 12956712 -186673438 + MLT1A1 LTR MaLR 1 365 0 297 250 11 65 chr5 12956879 12956971 -186673179 - MIR SINE MIR -52 210 124 208 316 25 13 chr5 13057878 13057972 -186572178 + G-rich Low_complexity Low_complexity 2 100 -61 3068 51 11 0 chr5 13057972 13058323 -186571827 + THE1A LTR MaLR 1 355 0 208 316 25 13 chr5 13058323 13058386 -186571764 + G-rich Low_complexity Low_complexity 100 161 0 * 327 219 50 6 chr5 13058368 13058528 -186571622 + (TG)n Simple_repeat Simple_repeat 1 167 0 294 216 39 12 chr5 13058568 13058905 -186571245 + (TG)n Simple_repeat Simple_repeat 1 346 0 305 273 35 6 chr5 13058922 13059094 -186571056 + (TG)n Simple_repeat Simple_repeat 1 177 0 229 316 35 0 chr5 13059313 13059484 -186570666 + (TG)n Simple_repeat Simple_repeat 1 177 0 366 233 47 6 chr5 13059665 13059837 -186570313 + (TG)n Simple_repeat Simple_repeat 1 179 0 271 283 35 0 chr5 13059856 13060001 -186570149 + (TG)n Simple_repeat Simple_repeat 2 151 0 215 244 116 58 chr5 13060193 13060365 -186569785 - L2 LINE L2 -783 2531 2350 337 217 48 12 chr5 13060390 13060473 -186569677 - L2 LINE L2 -1 3271 3186 287 195 78 109 chr5 13060471 13060599 -186569551 + L2 LINE L2 3189 3312 -1 * 1742 151 177 45 chr5 13060614 13060992 -186569158 - MSTA LTR MaLR 0 428 1 3822 135 8 12 chr5 13060992 13061586 -186568564 - MSTA-int LTR MaLR 0 1580 989 1975 156 178 6 chr5 13061588 13061953 -186568197 + MSTA LTR MaLR 1 428 0 821 156 106 110 chr5 13062203 13062421 -186567729 + MER58A DNA MER1_type 4 220 -4 21 36 0 0 chr5 13062483 13062511 -186567639 + AT_rich Low_complexity Low_complexity 1 28 0 1825 202 14 16 chr5 13062554 13062920 -186567230 - MLT1A1 LTR MaLR 0 365 1 306 0 0 0 chr5 13063380 13063414 -186566736 + (CA)n Simple_repeat Simple_repeat 2 35 0 284 289 40 59 chr5 13063541 13063693 -186566457 - MARNA DNA Mariner -352 234 86 689 343 75 41 chr5 13064430 13065123 -186565027 + L2 LINE L2 2525 3248 -24 671 301 31 9 chr5 13065371 13065600 -186564550 + MIR SINE MIR 8 241 -21 183 42 0 0 chr5 13065744 13065768 -186564382 + (CAAG)n Simple_repeat Simple_repeat 3 26 0 318 169 96 36 chr5 13066145 13066228 -186563922 + MER69 DNA AcHobo 2430 2517 -9 194 105 26 0 chr5 13066302 13066340 -186563810 + (TG)n Simple_repeat Simple_repeat 2 40 0 242 29 29 0 chr5 13066375 13066410 -186563740 + (TG)n Simple_repeat Simple_repeat 2 37 0 344 50 0 0 chr5 13066526 13066566 -186563584 - THE1B LTR MaLR 0 355 316 2356 100 31 31 chr5 13066567 13066916 -186563234 - THE1B LTR MaLR -15 349 1 507 337 36 8 chr5 13067132 13067384 -186562766 - MIR SINE MIR -2 260 2 1923 112 28 11 chr5 13069398 13069649 -186560501 + AluSg SINE Alu 1 259 -51 207 0 0 0 chr5 13069649 13069672 -186560478 + (CAGCC)n Simple_repeat Simple_repeat 5 27 0 1923 112 28 11 chr5 13069672 13069705 -186560445 + AluSg SINE Alu 259 290 -20 913 142 32 53 chr5 13069962 13070152 -186559998 - MER53 DNA DNA -1 188 3 198 268 119 3 chr5 13071257 13071361 -186558789 + MIR SINE MIR 32 147 -101 21 0 0 0 chr5 13071754 13071775 -186558375 + AT_rich Low_complexity Low_complexity 1 21 0 542 259 114 15 chr5 13071791 13071992 -186558158 - MIR SINE MIR -40 222 2 1928 155 23 0 chr5 13072245 13072548 -186557602 + AluJo SINE Alu 1 310 -2 4755 206 102 36 chr5 13072979 13073720 -186556430 - Charlie1a DNA MER1_type -1307 1454 764 14558 35 1 0 chr5 13073720 13076137 -186554013 - L1PA4 LINE L1 -1 6154 3737 4755 206 102 36 chr5 13076137 13076752 -186553398 - Charlie1a DNA MER1_type -1997 764 8 291 270 6 103 chr5 13077560 13077734 -186552416 + MIR SINE MIR 78 234 -28 1804 176 91 38 chr5 13077760 13077951 -186552199 - MLT1C LTR MaLR -47 420 241 2336 134 27 24 chr5 13077951 13078325 -186551825 - THE1C LTR MaLR 0 375 1 1804 176 91 38 chr5 13078325 13078530 -186551620 - MLT1C LTR MaLR -226 241 3 180 282 30 92 chr5 13078630 13078761 -186551389 - L2 LINE L2 -843 2471 2349 213 217 0 0 chr5 13078900 13078946 -186551204 - L2 LINE L2 -1 3312 3267 22 35 0 0 chr5 13079433 13079462 -186550688 + AT_rich Low_complexity Low_complexity 1 29 0 237 281 99 53 chr5 13080754 13080925 -186549225 + MLT1K LTR MaLR 169 347 -241 210 306 16 0 chr5 13081467 13081529 -186548621 - L2 LINE L2 -29 3243 3181 282 167 0 0 chr5 13081852 13081912 -186548238 + T-rich Low_complexity Low_complexity 1 60 0 2087 143 74 52 chr5 13083206 13083611 -186546539 - MLT2D LTR ERVL 0 414 1 706 296 91 32 chr5 13083654 13084118 -186546032 - L1ME2 LINE L1 -278 5886 5384 313 331 111 12 chr5 13084192 13084364 -186545786 + MIR SINE MIR 33 221 -41 241 244 79 8 chr5 13084557 13084684 -186545466 - L1ME2 LINE L1 -1090 5056 4921 1715 172 79 70 chr5 13085415 13085856 -186544294 - MER31B LTR ERV1 -21 445 1 4046 89 30 2 chr5 13086002 13086539 -186543611 + L1PA10 LINE L1 5616 6167 -1 2392 107 0 0 chr5 13087107 13087417 -186542733 - AluSg SINE Alu 0 310 1 202 265 0 0 chr5 13088495 13088544 -186541606 - L2 LINE L2 -18 3295 3247 730 175 95 31 chr5 13088655 13088875 -186541275 + MLT1G1 LTR MaLR 270 487 -18 2039 175 25 48 chr5 13088875 13089274 -186540876 + MLT1B LTR MaLR 1 390 0 730 175 95 31 chr5 13089274 13089286 -186540864 + MLT1G1 LTR MaLR 487 497 -8 1412 213 37 48 chr5 13090122 13090498 -186539652 + MLT1A2 LTR MaLR 3 374 0 911 279 174 42 chr5 13090728 13090769 -186539381 - L2 LINE L2 -526 2788 2754 2829 119 21 26 chr5 13090769 13091196 -186538954 + MSTA LTR MaLR 1 425 -3 911 279 174 42 chr5 13091196 13091660 -186538490 - L2 LINE L2 -560 2754 2216 350 285 39 23 chr5 13091663 13091793 -186538357 - MER94 DNA DNA -2 132 1 620 215 93 9 chr5 13091808 13092022 -186538128 - L2 LINE L2 -1102 2212 1981 288 269 52 30 chr5 13092022 13092156 -186537994 + L2 LINE L2 2119 2255 -1059 368 266 221 16 chr5 13092230 13092474 -186537676 + L2 LINE L2 3020 3313 0 1871 146 11 0 chr5 13092980 13093298 -186536852 + AluSx SINE Alu 1 321 0 21 0 0 0 chr5 13093400 13093421 -186536729 + AT_rich Low_complexity Low_complexity 1 21 0 1457 235 43 56 chr5 13093742 13094210 -186535940 - MLT1C LTR MaLR 0 467 6 678 225 89 0 chr5 13094230 13094443 -186535707 - L2 LINE L2 -1102 2212 1981 304 261 52 30 chr5 13094443 13094577 -186535573 + L2 LINE L2 2119 2255 -1059 857 231 18 27 chr5 13095463 13095688 -186534462 + MIR SINE MIR 15 237 -25 22 35 0 0 chr5 13097528 13097557 -186532593 + AT_rich Low_complexity Low_complexity 1 29 0 1705 178 68 22 chr5 13097575 13097940 -186532210 - MER58D DNA MER1_type -3 383 2 32 57 0 0 chr5 13098750 13098803 -186531347 + AT_rich Low_complexity Low_complexity 1 53 0 403 229 18 9 chr5 13099520 13099629 -186530521 - MER112 DNA MER1_type -12 248 139 647 311 18 5 chr5 13101551 13101770 -186528380 - MIR SINE MIR -38 224 3 1768 150 0 64 chr5 13102168 13102495 -186527655 - AluSx SINE Alu -4 308 3 2338 86 0 0 chr5 13103619 13103911 -186526239 + AluSx SINE Alu 1 292 -20 2288 99 0 19 chr5 13104788 13105100 -186525050 + AluSg SINE Alu 1 306 -4 1873 158 0 10 chr5 13105847 13106151 -186523999 - AluSx SINE Alu -11 301 1 249 365 48 12 chr5 13106198 13106365 -186523785 + MIR SINE MIR 1 173 -89 524 212 0 0 chr5 13106375 13106460 -186523690 + MER58A DNA MER1_type 7 91 -16 630 162 52 15 chr5 13106466 13106602 -186523548 - MLT1C LTR MaLR -326 141 1 453 306 115 25 chr5 13106745 13107023 -186523127 + L3 LINE CR1 882 1184 -393 282 95 0 0 chr5 13107265 13107307 -186522843 + (CA)n Simple_repeat Simple_repeat 1 42 0 341 284 58 0 chr5 13107308 13107463 -186522687 - L1ME4a LINE L1 -201 5920 5757 2609 68 0 0 chr5 13108002 13108313 -186521837 - AluY SINE Alu 0 311 1 1202 190 123 29 chr5 13108313 13108716 -186521434 - LTR54B LTR ERV1 -19 491 81 664 181 110 1 chr5 13110018 13110242 -186519908 + MSTD LTR MaLR 1 277 -119 437 258 131 28 chr5 13111167 13111488 -186518662 - MLT1F LTR MaLR -15 527 231 775 172 0 0 chr5 13111532 13111654 -186518496 - MLT2C2 LTR ERVL -48 416 295 874 181 7 0 chr5 13111660 13111815 -186518335 - MLT2C1 LTR ERVL -215 182 27 2040 124 66 30 chr5 13113068 13113430 -186516720 + THE1C LTR MaLR 1 375 0 1223 190 14 23 chr5 13113763 13113984 -186516166 + MER20 DNA MER1_type 1 219 0 357 298 48 42 chr5 13114247 13114415 -186515735 - L2 LINE L2 -18 3295 3127 208 373 78 25 chr5 13114806 13115010 -186515140 - L2 LINE L2 -549 2765 2551 435 138 25 38 chr5 13115941 13116021 -186514129 - MER20 DNA MER1_type 0 219 141 2319 117 47 36 chr5 13117099 13117459 -186512691 - THE1B LTR MaLR 0 364 1 475 306 40 69 chr5 13118001 13118251 -186511899 + MIR SINE MIR 6 251 -11 27 29 0 0 chr5 13118803 13118837 -186511313 + AT_rich Low_complexity Low_complexity 1 34 0 1091 261 78 7 chr5 13119140 13119587 -186510563 + MER119 DNA MER1_type 6 581 -2 26 30 0 0 chr5 13119650 13119683 -186510467 + AT_rich Low_complexity Low_complexity 1 33 0 1972 156 3 0 chr5 13119954 13120249 -186509901 + AluJo SINE Alu 1 296 -16 258 32 0 0 chr5 13120249 13120280 -186509870 + (TA)n Simple_repeat Simple_repeat 1 31 0 * 378 0 0 0 chr5 13120279 13120321 -186509829 + (GA)n Simple_repeat Simple_repeat 2 43 0 1534 221 42 16 chr5 13121151 13121531 -186508619 + MER90 LTR ERV1 225 614 0 254 256 29 12 chr5 13122274 13122446 -186507704 + (TA)n Simple_repeat Simple_repeat 2 176 0 313 260 175 15 chr5 13123430 13123630 -186506520 + L2 LINE L2 2470 2701 -613 243 298 35 0 chr5 13123638 13123737 -186506413 - L1ME2 LINE L1 -10 6324 6065 382 268 159 78 chr5 13123738 13124119 -186506031 + L2 LINE L2 2690 3140 -173 1515 188 124 28 chr5 13124119 13124545 -186505605 - MLT1C LTR MaLR 0 467 1 382 268 159 78 chr5 13124545 13124665 -186505485 + L2 LINE L2 3140 3249 -64 1735 199 64 31 chr5 13125028 13125511 -186504639 - MLT1D LTR MaLR 0 505 7 2370 99 7 0 chr5 13126193 13126497 -186503653 + AluSx SINE Alu 1 306 -6 382 267 43 105 chr5 13127289 13127566 -186502584 - MIR SINE MIR -1 261 2 222 316 24 97 chr5 13127818 13128024 -186502126 - MIR SINE MIR -50 212 22 787 211 43 0 chr5 13128106 13128291 -186501859 - MER20 DNA MER1_type 0 219 27 224 204 0 56 chr5 13129489 13129543 -186500607 - L2 LINE L2 -546 2768 2718 465 143 41 21 chr5 13129597 13130076 -186500074 + (TG)n Simple_repeat Simple_repeat 1 488 0 619 114 39 16 chr5 13130136 13130446 -186499704 + (TG)n Simple_repeat Simple_repeat 1 317 0 738 105 35 0 chr5 13130479 13130651 -186499499 + (TG)n Simple_repeat Simple_repeat 2 179 0 203 190 0 35 chr5 13131043 13131101 -186499049 + (CAGGG)n Simple_repeat Simple_repeat 3 58 0 283 188 0 25 chr5 13132030 13132110 -186498040 + (TATATG)n Simple_repeat Simple_repeat 3 80 0 1128 143 0 30 chr5 13133130 13133298 -186496852 + FRAM SINE Alu 3 165 -1 2564 68 0 0 chr5 13133474 13133784 -186496366 + AluY SINE Alu 1 310 -1 916 204 82 0 chr5 13135087 13135283 -186494867 + MER20 DNA MER1_type 1 212 -7 1745 167 89 30 chr5 13135639 13136034 -186494116 - LTR52 LTR ERVL -3 418 1 428 308 62 7 chr5 13136297 13136443 -186493707 + MIR SINE MIR 61 214 -48 333 229 0 0 chr5 13136536 13136641 -186493509 + (TG)n Simple_repeat Simple_repeat 1 105 0 309 89 0 0 chr5 13137034 13137079 -186493071 + (CA)n Simple_repeat Simple_repeat 1 45 0 2088 127 63 30 chr5 13137628 13137991 -186492159 - THE1C LTR MaLR 0 375 1 10844 118 31 12 chr5 13137991 13139541 -186490609 - THE1C-int LTR MaLR 0 1580 1 1446 144 137 13 chr5 13139542 13139841 -186490309 - THE1C LTR MaLR -39 336 1 2922 13 0 0 chr5 13140410 13140724 -186489426 - L1PA2 LINE L1 -1 6154 5841 186 133 0 0 chr5 13140960 13140990 -186489160 + (TATATG)n Simple_repeat Simple_repeat 5 34 0 381 188 0 0 chr5 13141033 13141118 -186489032 + (TA)n Simple_repeat Simple_repeat 2 86 0 240 35 0 0 chr5 13141118 13141147 -186489003 + (CA)n Simple_repeat Simple_repeat 2 30 0 929 193 6 11 chr5 13141253 13141429 -186488721 - AluJo SINE Alu -16 296 122 1913 144 21 0 chr5 13142010 13142301 -186487849 + AluJo SINE Alu 1 297 -15 2129 112 3 40 chr5 13142410 13142731 -186487419 - AluSx SINE Alu -3 309 1 518 223 0 25 chr5 13143371 13143492 -186486658 + MIR SINE MIR 23 140 -122 606 276 190 41 chr5 13143881 13144009 -186486141 - L2 LINE L2 0 3313 3205 2578 138 14 8 chr5 13144009 13144371 -186485779 + THE1B LTR MaLR 1 364 0 606 276 190 41 chr5 13144371 13144591 -186485559 - L2 LINE L2 -108 3205 3019 1269 240 88 30 chr5 13144591 13145032 -186485118 - MLT1C LTR MaLR 0 467 1 606 276 190 41 chr5 13145032 13145145 -186485005 - L2 LINE L2 -294 3019 2788 1788 170 7 0 chr5 13147974 13148263 -186481887 - AluJb SINE Alu -17 295 5 1404 209 109 6 chr5 13151009 13151320 -186478830 - MLT1D LTR MaLR -162 343 1 425 120 43 0 chr5 13152713 13152805 -186477345 + GA-rich Low_complexity Low_complexity 3 98 0 296 264 76 69 chr5 13152937 13153081 -186477069 + MER70-int LTR ERVL 1946 2090 -2933 1648 207 45 73 chr5 13154068 13154587 -186475563 - MLT1D LTR MaLR 0 624 2 489 317 18 23 chr5 13155703 13155924 -186474226 - L2 LINE L2 -19 3294 3075 444 288 86 56 chr5 13156014 13156247 -186473903 - L2 LINE L2 -405 2909 2670 268 230 11 23 chr5 13156893 13156980 -186473170 + (TA)n Simple_repeat Simple_repeat 1 86 0 31 0 0 0 chr5 13158849 13158880 -186471270 + AT_rich Low_complexity Low_complexity 1 31 0 297 349 137 11 chr5 13159222 13159397 -186470753 + L2 LINE L2 2440 2636 -678 252 272 12 0 chr5 13159708 13159789 -186470361 - MER69 DNA AcHobo -11 2515 2434 1872 155 30 3 chr5 13160365 13160662 -186469488 - AluSx SINE Alu -3 309 5 2048 78 8 0 chr5 13160849 13161107 -186469043 - AluY SINE Alu -9 302 43 523 273 45 27 chr5 13161394 13161727 -186468423 - L1M4 LINE L1 -1310 4836 4498 327 218 24 9 chr5 13161809 13161923 -186468227 + L1ME LINE L1 5384 5496 -670 534 317 128 38 chr5 13162098 13162940 -186467210 - L1 LINE L1 -1111 5035 4110 2844 78 3 0 chr5 13163392 13163776 -186466374 - L1PA7 LINE L1 0 6154 5770 231 310 178 8 chr5 13164739 13164868 -186465282 - MIR SINE MIR -23 239 89 201 164 16 33 chr5 13165549 13165610 -186464540 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 787 145 0 0 chr5 13167115 13167232 -186462918 + FLAM_C SINE Alu 1 117 -16 707 67 0 0 chr5 13167239 13167358 -186462792 + AluSg/x SINE Alu 193 311 0 2422 105 0 0 chr5 13167685 13167998 -186462152 + AluSq SINE Alu 1 313 0 252 0 0 0 chr5 13169379 13169407 -186460743 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 474 248 113 89 chr5 13169500 13169802 -186460348 - L2 LINE L2 -1 3312 3004 2515 64 0 3 chr5 13169811 13170123 -186460027 + AluY SINE Alu 1 311 0 23 0 0 0 chr5 13171351 13171374 -186458776 + AT_rich Low_complexity Low_complexity 1 23 0 240 238 99 50 chr5 13171868 13171969 -186458181 + MIR SINE MIR 135 240 -22 366 226 254 17 chr5 13175361 13175542 -186454608 - HAL1 LINE L1 -725 1782 1559 556 268 67 87 chr5 13175623 13176254 -186453896 - HAL1 LINE L1 -1156 1351 734 1639 227 29 48 chr5 13177918 13178433 -186451717 - MLT1D LTR MaLR 0 505 1 682 281 107 31 chr5 13178712 13179320 -186450830 - MLT2F LTR ERVL -8 655 2 749 209 44 11 chr5 13179968 13180150 -186450000 - MER58A DNA MER1_type 0 224 37 250 256 0 37 chr5 13180983 13181022 -186449128 - L2 LINE L2 0 3313 3274 2238 166 26 16 chr5 13181022 13181451 -186448699 - Tigger2a DNA MER2_type -1 433 1 250 256 0 37 chr5 13181451 13181493 -186448657 - L2 LINE L2 -39 3274 3235 405 216 35 26 chr5 13181745 13181861 -186448289 - L2 LINE L2 -96 3217 3101 232 237 41 52 chr5 13181933 13182030 -186448120 - MLT1J LTR MaLR -58 453 358 6201 92 8 3 chr5 13182160 13183538 -186446612 - L1PA10 LINE L1 -2 6166 4789 28 0 0 0 chr5 13184359 13184387 -186445763 + AT_rich Low_complexity Low_complexity 1 28 0 559 309 78 9 chr5 13185124 13185341 -186444809 - MIR SINE MIR -2 260 29 383 240 12 29 chr5 13185371 13185542 -186444608 + L1ME LINE L1 5135 5302 -844 572 291 97 15 chr5 13185600 13185992 -186444158 + L1ME LINE L1 5350 5773 -397 2319 123 5 46 chr5 13186018 13186191 -186443959 + HSMAR2 DNA Mariner 2 181 -1121 2213 95 3 0 chr5 13186191 13186510 -186443640 + AluSp SINE Alu 1 320 0 2319 123 5 46 chr5 13186510 13186751 -186443399 + HSMAR2 DNA Mariner 181 400 -902 402 100 29 0 chr5 13186785 13186855 -186443295 + HSMAR2 DNA Mariner 1230 1301 -1 291 157 0 0 chr5 13187067 13187137 -186443013 + (TA)n Simple_repeat Simple_repeat 1 70 0 2076 128 3 3 chr5 13188112 13188417 -186441733 + AluSg SINE Alu 1 305 -5 472 288 58 17 chr5 13189122 13189362 -186440788 + MER41B LTR ERV1 181 430 -205 374 250 25 55 chr5 13189921 13190069 -186440081 + MIR SINE MIR 93 233 -29 1226 219 239 11 chr5 13192166 13192521 -186437629 + L1MD2 LINE L1 5687 5960 -399 249 108 0 0 chr5 13192521 13192558 -186437592 + (CA)n Simple_repeat Simple_repeat 2 38 0 1226 219 239 11 chr5 13192558 13192737 -186437413 + L1MD2 LINE L1 5960 6343 -16 190 179 36 0 chr5 13192884 13192940 -186437210 + GA-rich Low_complexity Low_complexity 3 60 0 1744 183 121 7 chr5 13193879 13194310 -186435840 + MER31A LTR ERV1 1 480 -5 4447 208 47 21 chr5 13194409 13195346 -186434804 + MER45B DNA AcHobo 2 968 -613 2147 141 0 7 chr5 13195346 13195650 -186434500 - AluSx SINE Alu -10 302 1 4447 208 47 21 chr5 13195650 13195714 -186434436 + MER45B DNA AcHobo 968 1029 -11 2683 77 9 0 chr5 13195916 13196266 -186433884 - THE1A LTR MaLR -2 353 1 204 309 49 89 chr5 13196522 13196645 -186433505 + L2 LINE L2 3063 3180 -92 2168 123 3 0 chr5 13198040 13198340 -186431810 + AluSg SINE Alu 1 301 -9 698 283 86 47 chr5 13199416 13199950 -186430200 + MLT1H1 LTR MaLR 1 555 0 21 57 0 0 chr5 13200107 13200142 -186430008 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 13200191 13200212 -186429938 + AT_rich Low_complexity Low_complexity 1 21 0 2000 73 0 8 chr5 13201030 13201277 -186428873 + AluY SINE Alu 1 245 -66 2347 256 30 20 chr5 13201318 13201449 -186428701 + L1ME2 LINE L1 5381 5509 -655 2278 164 36 24 chr5 13201449 13201870 -186428280 - MSTB LTR MaLR 0 426 1 2347 256 30 20 chr5 13201870 13202316 -186427834 + L1ME2 LINE L1 5509 5970 -194 183 80 0 0 chr5 13202316 13202341 -186427809 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2347 256 30 20 chr5 13202341 13202528 -186427622 + L1ME2 LINE L1 5970 6154 -10 2249 72 0 29 chr5 13203129 13203477 -186426673 - AluY SINE Alu 0 311 1 693 253 74 0 chr5 13203479 13203681 -186426469 - MER58A DNA MER1_type -6 218 2 350 304 67 47 chr5 13204212 13204465 -186425685 + L3 LINE CR1 1314 1571 -6 295 258 21 43 chr5 13206301 13206394 -186423756 - L2 LINE L2 0 3313 3223 875 153 0 7 chr5 13207572 13207709 -186422441 - FRAM SINE Alu -18 158 23 513 0 0 0 chr5 13207775 13207832 -186422318 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 216 158 0 0 chr5 13207832 13207870 -186422280 + (TA)n Simple_repeat Simple_repeat 1 38 0 754 164 0 22 chr5 13207870 13208004 -186422146 - FLAM_C SINE Alu -2 131 1 2030 107 0 71 chr5 13209401 13209727 -186420423 - AluSg SINE Alu -5 305 3 318 309 85 12 chr5 13210122 13210287 -186419863 - L1ME4a LINE L1 -22 6099 5923 257 64 46 64 chr5 13210844 13210953 -186419197 + (TTATA)n Simple_repeat Simple_repeat 5 111 0 24 32 0 0 chr5 13210968 13210999 -186419151 + AT_rich Low_complexity Low_complexity 1 31 0 1058 165 23 0 chr5 13213592 13213768 -186416382 - AluSg/x SINE Alu -4 306 127 9245 106 18 4 chr5 13214592 13216007 -186414143 + L1P LINE L1 2762 4195 -1951 344 171 26 26 chr5 13216127 13216203 -186413947 + L1MC1 LINE L1 6244 6319 -14 6373 134 16 36 chr5 13217518 13218749 -186411401 + L1P3 LINE L1 28 1123 -5023 336 24 0 0 chr5 13218857 13218898 -186411252 + (GA)n Simple_repeat Simple_repeat 2 42 0 396 191 67 0 chr5 13218906 13218995 -186411155 - L1M4 LINE L1 -1202 4944 4850 288 266 0 0 chr5 13219377 13219441 -186410709 + L2 LINE L2 3250 3313 0 180 383 32 0 chr5 13219989 13220083 -186410067 + MIR SINE MIR 76 172 -90 418 165 0 25 chr5 13220182 13220261 -186409889 - THE1B LTR MaLR 0 364 288 601 230 27 0 chr5 13220271 13220419 -186409731 - L1P3 LINE L1 -3529 2617 2466 1057 137 11 16 chr5 13220523 13220706 -186409444 - L1MC1 LINE L1 -83 6250 6069 435 193 18 97 chr5 13220753 13220800 -186409350 - L1MC1 LINE L1 -2171 5637 5588 243 79 0 0 chr5 13220800 13220838 -186409312 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 1706 119 4 8 chr5 13220838 13221075 -186409075 - AluSg SINE Alu -28 282 47 435 193 18 97 chr5 13221075 13221146 -186409004 - L1MC1 LINE L1 -2218 5590 5533 228 182 0 0 chr5 13221830 13221874 -186408276 + (TG)n Simple_repeat Simple_repeat 1 44 0 971 128 0 0 chr5 13221874 13222072 -186408078 - L1P3 LINE L1 -4677 1469 1272 1061 93 0 0 chr5 13222075 13222214 -186407936 + L1P3 LINE L1 946 1084 -5377 726 244 107 99 chr5 13223201 13223566 -186406584 + MER57B LTR ERV1 67 434 0 1875 140 35 77 chr5 13224438 13224867 -186405283 - L1 LINE L1 -1801 4345 3935 22 35 0 0 chr5 13225472 13225501 -186404649 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 13225906 13225934 -186404216 + AT_rich Low_complexity Low_complexity 1 28 0 1555 254 94 31 chr5 13226685 13227291 -186402859 + HsTC2a DNA Tc2 14 657 -87 240 191 36 12 chr5 13227331 13227415 -186402735 + CT-rich Low_complexity Low_complexity 3 88 0 408 160 80 0 chr5 13227883 13227958 -186402192 + L1PA16 LINE L1 6077 6157 -9 1396 188 89 0 chr5 13229161 13229465 -186400685 - MER2 DNA MER2_type -7 338 8 247 264 27 18 chr5 13229866 13229976 -186400174 - L1MEc LINE L1 -6250 146 36 813 175 8 0 chr5 13231385 13231510 -186398640 + MER1B DNA MER1_type 21 146 -151 376 20 78 0 chr5 13231510 13231561 -186398589 - MLT2A2 LTR ERVL 0 453 399 369 162 0 0 chr5 13231561 13231629 -186398521 + (CA)n Simple_repeat Simple_repeat 1 68 0 203 318 16 0 chr5 13231639 13231702 -186398448 + (CATA)n Simple_repeat Simple_repeat 4 67 0 234 245 0 43 chr5 13231702 13231796 -186398354 + L1MC4 LINE L1 6614 6703 -1339 246 208 0 0 chr5 13231799 13231852 -186398298 + (TA)n Simple_repeat Simple_repeat 1 53 0 2870 108 0 26 chr5 13231852 13232276 -186397874 - MLT2A2 LTR ERVL -40 413 1 722 196 76 71 chr5 13232283 13232467 -186397683 + MER1B DNA MER1_type 155 339 0 1881 135 35 0 chr5 13233887 13234169 -186395981 + AluSc SINE Alu 1 292 -17 337 281 158 14 chr5 13234814 13234953 -186395197 + MIR SINE MIR 35 193 -69 373 385 7 7 chr5 13235747 13235882 -186394268 + MER91A DNA MER1_type 15 149 -47 2964 172 72 27 chr5 13236364 13236578 -186393572 + L1MA9 LINE L1 5578 5781 -531 396 0 0 0 chr5 13236578 13236622 -186393528 + (CA)n Simple_repeat Simple_repeat 2 45 0 2964 172 72 27 chr5 13236622 13237046 -186393104 + L1MA9 LINE L1 5781 6245 -67 1989 171 119 10 chr5 13237242 13237628 -186392522 - MSTA LTR MaLR 0 428 1 8925 179 19 12 chr5 13237628 13239267 -186390883 - MSTA-int LTR MaLR 0 1651 1 2131 143 120 5 chr5 13239267 13239651 -186390499 - MSTA LTR MaLR 0 428 1 495 291 23 102 chr5 13239652 13239917 -186390233 + MIR SINE MIR 15 258 -4 2197 124 3 0 chr5 13240078 13240384 -186389766 + AluSg SINE Alu 1 307 -3 332 283 133 0 chr5 13240868 13240988 -186389162 - MIR SINE MIR -120 142 7 21 0 0 0 chr5 13241133 13241154 -186388996 + AT_rich Low_complexity Low_complexity 1 21 0 227 293 79 43 chr5 13241456 13241620 -186388530 - L2 LINE L2 -25 3288 3119 253 283 104 0 chr5 13243098 13243204 -186386946 + L1ME LINE L1 5550 5666 -455 476 315 38 46 chr5 13243256 13243494 -186386656 + MIR SINE MIR 17 252 -10 239 172 0 17 chr5 13243586 13243644 -186386506 + GA-rich Low_complexity Low_complexity 3 59 0 22 35 0 0 chr5 13243817 13243846 -186386304 + AT_rich Low_complexity Low_complexity 1 29 0 1649 183 0 20 chr5 13244428 13244723 -186385427 + AluJo SINE Alu 3 291 -21 2254 108 0 0 chr5 13245003 13245300 -186384850 - AluY SINE Alu -13 298 2 1268 242 84 49 chr5 13245671 13246054 -186384096 - MER97c DNA MER1_type? 0 1090 722 3357 30 0 2 chr5 13246054 13246456 -186383694 + L1PA4 LINE L1 5752 6152 -3 1268 242 84 49 chr5 13246456 13247016 -186383134 - MER97c DNA MER1_type? -368 722 40 862 306 92 34 chr5 13247066 13247534 -186382616 + L2 LINE L2 2815 3309 -4 257 167 0 61 chr5 13247795 13247861 -186382289 + LTR66 LTR ERVL 377 438 -172 225 250 31 0 chr5 13247861 13247925 -186382225 + L1MC4 LINE L1 6637 6702 -1340 417 228 0 35 chr5 13247927 13248072 -186382078 + (TATATG)n Simple_repeat Simple_repeat 3 142 0 227 288 0 12 chr5 13248082 13248162 -186381988 - L1MC4 LINE L1 -1347 6695 6617 225 234 0 0 chr5 13248339 13248403 -186381747 + (TA)n Simple_repeat Simple_repeat 2 65 0 242 310 11 0 chr5 13250119 13250206 -186379944 - MER103 DNA DNA -2 164 77 444 248 222 7 chr5 13250410 13250563 -186379587 - MER5A DNA MER1_type 0 189 4 925 215 9 36 chr5 13250573 13250796 -186379354 - MER20 DNA MER1_type 0 219 3 1797 153 0 4 chr5 13250972 13251246 -186378904 + AluSx SINE Alu 1 273 -39 248 288 27 14 chr5 13251946 13252019 -186378131 + MIR3 SINE MIR 106 179 -29 28 0 0 0 chr5 13252076 13252104 -186378046 + AT_rich Low_complexity Low_complexity 1 28 0 359 315 121 58 chr5 13254765 13255304 -186374846 + L2 LINE L2 1620 2192 -1122 1865 169 0 0 chr5 13256173 13256469 -186373681 - AluSg SINE Alu -14 296 1 265 240 39 10 chr5 13256509 13256613 -186373537 - L1M4 LINE L1 -3595 3362 3256 2404 242 40 49 chr5 13256615 13258540 -186371610 - L1M4 LINE L1 -4799 2160 151 225 309 0 0 chr5 13258750 13258844 -186371306 + L1M4 LINE L1 5004 5097 -1049 2216 92 0 7 chr5 13258999 13259281 -186370869 - AluSq SINE Alu -17 296 17 235 301 14 0 chr5 13259496 13259569 -186370581 + L1P3 LINE L1 5477 5550 -622 1057 164 6 0 chr5 13260133 13260304 -186369846 + FRAM SINE Alu 1 172 -4 243 0 0 0 chr5 13260680 13260707 -186369443 + (TTG)n Simple_repeat Simple_repeat 2 28 0 441 313 106 17 chr5 13260869 13261048 -186369102 - L3 LINE CR1 -12 1565 1371 224 329 26 0 chr5 13261265 13261341 -186368809 - L3 LINE CR1 -542 1035 958 452 341 5 28 chr5 13261396 13261661 -186368489 + MIR SINE MIR 2 262 0 275 269 183 32 chr5 13261690 13261876 -186368274 - L3 LINE CR1 -692 885 672 2265 128 75 9 chr5 13261880 13262333 -186367817 + MER1A DNA MER1_type 1 525 -4 312 326 16 16 chr5 13262761 13262890 -186367260 - L3 LINE CR1 -1123 454 326 986 170 72 26 chr5 13264003 13264061 -186366089 - L1P LINE L1 -3630 2516 2462 519 60 0 0 chr5 13264061 13264128 -186366022 + (TA)n Simple_repeat Simple_repeat 2 68 0 986 170 72 26 chr5 13264128 13264334 -186365816 - L1P LINE L1 -3684 2462 2240 1611 178 41 46 chr5 13264334 13264700 -186365450 - THE1B LTR MaLR 0 364 1 2457 217 16 9 chr5 13267220 13267769 -186362381 - MER74A LTR ERVL 0 558 6 21 36 0 0 chr5 13267841 13267869 -186362281 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 13268300 13268321 -186361829 + AT_rich Low_complexity Low_complexity 1 21 0 2127 130 0 0 chr5 13268498 13268798 -186361352 - AluSx SINE Alu -12 300 1 555 203 149 31 chr5 13269504 13269726 -186360424 + MER46C DNA MER2_type 86 333 -5 199 274 39 0 chr5 13270346 13270397 -186359753 + L2 LINE L2 3214 3266 -6 1920 147 10 0 chr5 13271017 13271309 -186358841 + AluSx SINE Alu 1 295 -17 505 110 20 20 chr5 13271314 13271414 -186358736 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 350 289 60 27 chr5 13272226 13272375 -186357775 + MIR3 SINE MIR 20 173 -35 334 104 0 0 chr5 13272653 13272701 -186357449 - MADE1 DNA Mariner 0 80 33 492 266 149 0 chr5 13272975 13273163 -186356987 - MIR SINE MIR -43 219 4 532 279 127 23 chr5 13273215 13273532 -186356618 - L1ME3A LINE L1 -338 5832 5479 1741 192 3 3 chr5 13275002 13275310 -186354840 - AluJo SINE Alu -4 308 1 2011 127 0 20 chr5 13276373 13276673 -186353477 - AluSx SINE Alu -18 294 1 2752 83 5 5 chr5 13276825 13277199 -186352951 - THE1C LTR MaLR -1 374 1 211 233 19 0 chr5 13277682 13277747 -186352403 + MIR SINE MIR 95 146 -62 23 33 0 0 chr5 13278572 13278602 -186351548 + AT_rich Low_complexity Low_complexity 1 30 0 1291 282 39 78 chr5 13279125 13279938 -186350212 - L2 LINE L2 -315 2957 2186 22 0 0 0 chr5 13280715 13280737 -186349413 + AT_rich Low_complexity Low_complexity 1 22 0 2106 218 33 4 chr5 13280867 13281321 -186348829 - MLT1C LTR MaLR 0 467 1 591 325 23 52 chr5 13281435 13281740 -186348410 + L2 LINE L2 2190 2485 -829 1249 257 118 47 chr5 13281763 13282358 -186347792 - MLT1E2 LTR MaLR 0 626 1 302 238 95 48 chr5 13282586 13282691 -186347459 + L2 LINE L2 2693 2802 -512 242 213 33 90 chr5 13282714 13282836 -186347314 + L2 LINE L2 3095 3209 -104 256 280 190 10 chr5 13284316 13284416 -186345734 + L2 LINE L2 3149 3266 -6 346 105 64 23 chr5 13285348 13285519 -186344631 + (TA)n Simple_repeat Simple_repeat 2 179 0 32 43 0 0 chr5 13286000 13286046 -186344104 + AT_rich Low_complexity Low_complexity 1 46 0 24 77 0 0 chr5 13286597 13286649 -186343501 + AT_rich Low_complexity Low_complexity 1 52 0 2201 135 0 0 chr5 13287441 13287745 -186342405 - AluSx SINE Alu -8 304 1 1786 140 122 33 chr5 13288946 13289339 -186340811 + MSTA LTR MaLR 1 428 0 412 183 61 0 chr5 13290000 13290082 -186340068 + MIR SINE MIR 86 172 -90 1445 203 57 0 chr5 13290307 13290588 -186339562 + AluJb SINE Alu 1 297 -15 21 36 0 0 chr5 13292694 13292722 -186337428 + AT_rich Low_complexity Low_complexity 1 28 0 355 91 127 0 chr5 13293815 13293870 -186336280 - MADE1 DNA Mariner -18 62 1 852 281 69 46 chr5 13293890 13294353 -186335797 - L1ME3A LINE L1 -291 5879 5399 2534 114 6 0 chr5 13294353 13294714 -186335436 - THE1B LTR MaLR -1 363 1 852 281 69 46 chr5 13294714 13294816 -186335334 - L1ME3A LINE L1 -771 5399 5301 427 246 42 36 chr5 13294870 13295037 -186335113 - L1ME3A LINE L1 -914 5232 5065 574 282 55 0 chr5 13295155 13295410 -186334740 - L1ME3A LINE L1 -1240 4906 4638 183 42 0 0 chr5 13295836 13295860 -186334290 + (GGAA)n Simple_repeat Simple_repeat 4 27 0 779 147 6 0 chr5 13295860 13296037 -186334113 + GA-rich Low_complexity Low_complexity 1 178 0 275 365 7 0 chr5 13296776 13296921 -186333229 + HAL1b LINE L1 374 519 -829 608 265 100 28 chr5 13297207 13297456 -186332694 - LTR7 LTR ERV1 0 450 184 2280 88 7 0 chr5 13297805 13298101 -186332049 + AluY SINE Alu 1 298 -13 324 0 0 0 chr5 13298836 13298872 -186331278 + (TG)n Simple_repeat Simple_repeat 2 37 0 578 307 109 60 chr5 13302027 13302603 -186327547 + L2 LINE L2 2665 3276 -37 422 0 38 0 chr5 13302631 13302684 -186327466 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 21 0 0 0 chr5 13302704 13302725 -186327425 + AT_rich Low_complexity Low_complexity 1 21 0 212 319 0 0 chr5 13305891 13305960 -186324190 + MIR3 SINE MIR 99 167 -41 268 240 62 27 chr5 13306103 13306249 -186323901 - Charlie7 DNA MER1_type 0 2612 2462 770 328 153 33 chr5 13306684 13307587 -186322563 + L3 LINE CR1 560 1570 -7 216 294 153 0 chr5 13307856 13307941 -186322209 + MIR SINE MIR 56 153 -109 24 32 0 0 chr5 13308979 13309010 -186321140 + AT_rich Low_complexity Low_complexity 1 31 0 192 243 27 54 chr5 13309357 13309431 -186320719 + MIR SINE MIR 65 136 -126 351 44 0 0 chr5 13309452 13309497 -186320653 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2159 101 0 0 chr5 13309499 13309777 -186320373 - AluSg SINE Alu -32 278 1 44 63 0 0 chr5 13311723 13311802 -186318348 + AT_rich Low_complexity Low_complexity 1 79 0 373 348 148 28 chr5 13311813 13312204 -186317946 - L2 LINE L2 -535 2779 2342 252 327 40 7 chr5 13312326 13312476 -186317674 - L2 LINE L2 -1211 2103 1949 270 386 18 6 chr5 13313397 13313560 -186316590 - L3 LINE CR1 -418 1159 995 383 267 144 28 chr5 13313750 13313930 -186316220 + MIR SINE MIR 49 249 -13 391 272 221 26 chr5 13314917 13315112 -186315038 - MIR SINE MIR 0 262 30 371 233 56 83 chr5 13316187 13316367 -186313783 - MER104 DNA Tc2 0 180 6 2084 266 148 50 chr5 13316367 13318119 -186312031 + HAL1 LINE L1 162 2086 -421 883 158 14 53 chr5 13318148 13318409 -186311741 - MLT1A1 LTR MaLR 0 365 3 1455 263 140 6 chr5 13319781 13320408 -186309742 + L1MEc LINE L1 220 930 -5466 756 253 56 48 chr5 13320421 13320923 -186309227 + L1MEc LINE L1 976 1481 -4915 516 93 0 23 chr5 13320925 13321011 -186309139 + Alu SINE Alu 226 309 -3 286 326 0 16 chr5 13321159 13321288 -186308862 + L1MEc LINE L1 1666 1792 -4604 348 324 87 27 chr5 13322771 13322956 -186307194 - MIR SINE MIR -16 246 51 248 203 102 52 chr5 13323957 13324110 -186306040 - MLT1J1 LTR MaLR -22 424 256 2076 124 0 23 chr5 13326099 13326398 -186303752 - AluSx SINE Alu -20 292 1 318 375 21 0 chr5 13327967 13328111 -186302039 - MIR SINE MIR -8 254 108 439 238 111 22 chr5 13329244 13329425 -186300725 - MIR SINE MIR -61 201 5 1686 165 4 14 chr5 13329492 13329771 -186300379 + AluJb SINE Alu 4 279 -33 387 0 0 0 chr5 13329775 13329818 -186300332 + (CA)n Simple_repeat Simple_repeat 1 43 0 294 353 39 13 chr5 13329839 13329992 -186300158 + L2 LINE L2 3116 3272 0 954 265 71 82 chr5 13330352 13330983 -186299167 + MLT1E3 LTR MaLR 1 624 0 23 0 0 0 chr5 13332010 13332033 -186298117 + AT_rich Low_complexity Low_complexity 1 23 0 203 161 0 0 chr5 13333036 13333067 -186297083 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 185 108 27 0 chr5 13333214 13333251 -186296899 + (TA)n Simple_repeat Simple_repeat 1 38 0 321 346 57 13 chr5 13333505 13333664 -186296486 - MIR SINE MIR 0 262 97 196 326 49 12 chr5 13335458 13335592 -186294558 + MIR SINE MIR 3 144 -68 1213 169 111 29 chr5 13336136 13336262 -186293888 + AluJb SINE Alu 1 115 -187 2237 121 0 6 chr5 13336262 13336576 -186293574 + AluSq SINE Alu 2 313 0 1213 169 111 29 chr5 13336576 13336728 -186293422 + AluJb SINE Alu 115 302 0 499 271 85 34 chr5 13337875 13338111 -186292039 + MIR SINE MIR 12 259 -3 465 304 96 29 chr5 13339982 13340629 -186289521 - L1ME3 LINE L1 -216 5946 5257 327 314 64 59 chr5 13340793 13340838 -186289312 - L1ME3 LINE L1 -1089 5057 5014 1950 129 18 0 chr5 13340838 13341175 -186288975 - AluSx SINE Alu 0 342 1 327 314 64 59 chr5 13341175 13341364 -186288786 - L1ME3 LINE L1 -1132 5014 4821 258 248 73 9 chr5 13341589 13341698 -186288452 - L1 LINE L1 -1807 4339 4224 911 200 109 115 chr5 13341881 13342451 -186287699 - L1MB5 LINE L1 -8 6166 5599 1933 136 36 7 chr5 13342474 13342776 -186287374 - AluSx SINE Alu -1 311 1 192 40 0 0 chr5 13342823 13342848 -186287302 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1808 112 7 86 chr5 13342848 13343015 -186287135 - AluSx SINE Alu -32 280 146 2281 96 3 16 chr5 13343015 13343329 -186286821 - AluSg SINE Alu 0 310 1 1808 112 7 86 chr5 13343329 13343465 -186286685 - AluSx SINE Alu -166 146 1 1048 218 87 3 chr5 13343534 13343832 -186286318 - L1ME1 LINE L1 -327 5839 5517 596 82 0 0 chr5 13343909 13343994 -186286156 + AluY SINE Alu 218 302 -9 477 307 47 25 chr5 13344077 13344354 -186285796 - L1MEd LINE L1 -5294 825 543 367 149 27 0 chr5 13344529 13344603 -186285547 - L1MB8 LINE L1 -6 6172 6097 566 209 41 102 chr5 13346109 13346353 -186283797 + MER106A DNA MER1_type 3 231 -5 513 279 18 18 chr5 13346875 13347040 -186283110 - MER5B DNA MER1_type 0 178 14 262 231 179 43 chr5 13347233 13347350 -186282800 - MIR SINE MIR 0 262 130 1713 136 27 0 chr5 13347394 13347652 -186282498 + AluSx SINE Alu 39 303 -9 2265 96 0 19 chr5 13348102 13348414 -186281736 - AluSx SINE Alu -6 306 1 514 250 31 66 chr5 13351035 13351231 -186278919 - MER5A DNA MER1_type 0 189 1 3857 86 0 0 chr5 13351282 13351792 -186278358 - L1PB1 LINE L1 -1 6150 5641 1766 181 3 10 chr5 13351802 13352116 -186278034 + AluJo SINE Alu 1 312 0 410 273 62 0 chr5 13352119 13352247 -186277903 - MIR SINE MIR -3 259 124 2111 108 14 3 chr5 13352961 13353258 -186276892 - AluSq SINE Alu -13 300 1 1881 137 43 10 chr5 13353533 13353832 -186276318 - AluSq SINE Alu -3 310 2 409 263 44 18 chr5 13354293 13354407 -186275743 + MER5A DNA MER1_type 8 124 -65 217 318 61 0 chr5 13355558 13355624 -186274526 + L2 LINE L2 3222 3291 -22 696 258 95 28 chr5 13355904 13356187 -186273963 - LTR16A LTR ERVL -93 357 56 2053 136 7 0 chr5 13356521 13356822 -186273328 - AluSx SINE Alu -9 303 1 181 266 137 73 chr5 13360312 13360436 -186269714 - L2 LINE L2 -3 3269 3138 330 272 22 66 chr5 13360778 13360914 -186269236 + MIR SINE MIR 1 130 -132 2306 170 85 4 chr5 13360917 13361459 -186268691 - L1MB4 LINE L1 0 6180 5595 388 260 20 10 chr5 13361459 13361559 -186268591 + MIR SINE MIR 115 215 -47 2339 160 82 29 chr5 13361715 13361963 -186268187 - MER6A DNA MER2_type -260 605 372 2006 151 10 0 chr5 13361963 13362262 -186267888 + AluSx SINE Alu 1 302 -10 2339 160 82 29 chr5 13362262 13362525 -186267625 - MER6A DNA MER2_type -493 372 67 218 287 293 7 chr5 13365746 13365896 -186264254 - MIR3 SINE MIR -6 202 10 195 314 0 0 chr5 13366484 13366535 -186263615 - L2 LINE L2 -7 3265 3215 417 249 16 124 chr5 13366639 13366832 -186263318 - MIR SINE MIR -1 261 90 2296 107 0 25 chr5 13367989 13368307 -186261843 - AluSq SINE Alu -3 310 1 204 67 0 0 chr5 13368388 13368418 -186261732 + (CCTA)n Simple_repeat Simple_repeat 2 31 0 559 344 166 11 chr5 13368576 13368931 -186261219 - L2 LINE L2 -1148 2166 1757 213 384 88 8 chr5 13368951 13369076 -186261074 + MIR SINE MIR 13 147 -115 189 0 0 0 chr5 13369134 13369155 -186260995 + (TG)n Simple_repeat Simple_repeat 2 22 0 3782 104 60 53 chr5 13369242 13369989 -186260161 - Tigger3(Golem) DNA MER2_type -1 3028 2277 625 176 0 0 chr5 13369978 13370080 -186260070 - Tigger3(Golem) DNA MER2_type -2919 110 9 * 709 176 7 0 chr5 13370091 13370233 -186259917 - L1MA9 LINE L1 -272 6040 5898 478 169 0 0 chr5 13370236 13370319 -186259831 + L1MA9 LINE L1 6057 6139 -173 32 0 0 0 chr5 13370329 13370361 -186259789 + AT_rich Low_complexity Low_complexity 1 32 0 1534 69 0 5 chr5 13370361 13370565 -186259585 - L1PA8 LINE L1 -3 6169 5967 788 149 65 0 chr5 13370565 13370714 -186259436 + L1MA9 LINE L1 6143 6306 -6 1898 237 60 21 chr5 13371233 13371797 -186258353 - L1M4 LINE L1 -1405 4741 4147 243 0 0 0 chr5 13371797 13371824 -186258326 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1898 237 60 21 chr5 13371824 13371910 -186258240 - L1M4 LINE L1 -1999 4147 4066 1374 176 8 31 chr5 13372046 13372307 -186257843 - AluJo SINE Alu -21 291 37 942 147 21 0 chr5 13373208 13373351 -186256799 + AluSg/x SINE Alu 145 290 -20 214 149 21 21 chr5 13373873 13373920 -186256230 + (TA)n Simple_repeat Simple_repeat 1 47 0 1223 171 4 34 chr5 13373949 13374183 -186255967 - AluJo SINE Alu -3 309 83 24 0 0 0 chr5 13374196 13374220 -186255930 + AT_rich Low_complexity Low_complexity 1 24 0 793 216 6 23 chr5 13375887 13376058 -186254092 - MER45A DNA AcHobo -2 176 9 26 0 0 0 chr5 13376525 13376551 -186253599 + AT_rich Low_complexity Low_complexity 1 26 0 252 229 85 102 chr5 13376641 13376759 -186253391 + MIR SINE MIR 22 137 -71 2132 116 3 3 chr5 13377217 13377509 -186252641 - AluSx SINE Alu -17 295 4 245 318 24 12 chr5 13377782 13377867 -186252283 - MER5A DNA MER1_type -92 97 12 1604 160 7 41 chr5 13377928 13378222 -186251928 + AluJo SINE Alu 10 293 -19 212 330 52 31 chr5 13378383 13378480 -186251670 + L3b LINE CR1 1481 1579 -4 2201 115 3 0 chr5 13379236 13379531 -186250619 - AluSx SINE Alu -16 296 1 222 318 82 0 chr5 13381043 13381128 -186249022 - L2 LINE L2 -679 2635 2544 633 272 56 12 chr5 13381480 13381730 -186248420 - L1MA9 LINE L1 -37 6275 6015 333 369 43 0 chr5 13381824 13381965 -186248185 - MIR SINE MIR -110 152 6 246 62 0 0 chr5 13383876 13383908 -186246242 + (CAG)n Simple_repeat Simple_repeat 1 32 0 605 276 74 10 chr5 13385380 13385583 -186244567 - L2 LINE L2 -3037 277 62 29 47 0 0 chr5 13385621 13385664 -186244486 + AT_rich Low_complexity Low_complexity 1 43 0 251 313 61 10 chr5 13385804 13385903 -186244247 + L2 LINE L2 3191 3294 -19 1203 192 43 34 chr5 13385906 13386102 -186244048 - MLT1A1 LTR MaLR -4 361 159 2269 88 3 61 chr5 13386102 13386431 -186243719 - AluY SINE Alu -1 310 1 1203 192 43 34 chr5 13386431 13386583 -186243567 - MLT1A1 LTR MaLR -206 159 10 239 235 59 0 chr5 13387850 13387901 -186242249 - L2 LINE L2 -9 3263 3210 417 284 58 8 chr5 13388186 13388429 -186241721 + L1MC5 LINE L1 7337 7591 -370 324 300 94 11 chr5 13388530 13388710 -186241440 + L1MC5 LINE L1 7703 7897 -64 291 259 140 28 chr5 13390605 13390748 -186239402 + L2 LINE L2 2924 3082 -231 23 33 0 0 chr5 13392748 13392778 -186237372 + AT_rich Low_complexity Low_complexity 1 30 0 24 53 0 0 chr5 13393641 13393679 -186236471 + AT_rich Low_complexity Low_complexity 1 38 0 21 71 0 0 chr5 13394180 13394222 -186235928 + AT_rich Low_complexity Low_complexity 1 42 0 474 136 0 0 chr5 13395039 13395105 -186235045 - Alu SINE Alu -26 284 219 1659 143 42 4 chr5 13395105 13395364 -186234786 - AluSx SINE Alu -43 269 1 236 284 0 16 chr5 13395399 13395526 -186234624 + (TA)n Simple_repeat Simple_repeat 2 126 0 330 26 0 0 chr5 13395606 13395645 -186234505 + (CA)n Simple_repeat Simple_repeat 2 40 0 208 318 0 16 chr5 13395645 13395771 -186234379 + (TA)n Simple_repeat Simple_repeat 1 124 0 736 241 25 63 chr5 13396578 13396815 -186233335 + MIR SINE MIR 14 241 -21 950 194 0 11 chr5 13397134 13397309 -186232841 - AluJb SINE Alu -3 309 137 195 167 0 0 chr5 13397495 13397537 -186232613 + (TG)n Simple_repeat Simple_repeat 2 43 0 22 56 0 0 chr5 13397778 13397814 -186232336 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 13398348 13398384 -186231766 + AT_rich Low_complexity Low_complexity 1 36 0 2289 249 47 20 chr5 13398777 13399557 -186230593 + L1ME1 LINE L1 5316 6116 -50 1362 204 137 0 chr5 13400224 13400582 -186229568 + MER63B DNA MER1_type 1 407 -29 23 33 0 0 chr5 13401304 13401334 -186228816 + AT_rich Low_complexity Low_complexity 1 30 0 406 266 32 19 chr5 13401474 13401628 -186228522 + CT-rich Low_complexity Low_complexity 4 159 0 657 296 107 70 chr5 13401934 13402761 -186227389 - L1MC/D LINE L1 -766 5380 4583 297 75 0 0 chr5 13402761 13402801 -186227349 + (CA)n Simple_repeat Simple_repeat 1 40 0 657 296 107 70 chr5 13402801 13403220 -186226930 - L1MC/D LINE L1 -1563 4583 4181 824 303 101 51 chr5 13404658 13405727 -186224423 + L2 LINE L2 2197 3313 0 519 135 0 0 chr5 13406452 13406548 -186223602 + (TC)n Simple_repeat Simple_repeat 1 96 0 1130 163 49 0 chr5 13406548 13406732 -186223418 - AluJb SINE Alu -34 278 86 525 246 29 6 chr5 13406778 13406949 -186223201 + MER96B DNA MER1_type? 2 176 -241 369 0 0 0 chr5 13407471 13407512 -186222638 + (CA)n Simple_repeat Simple_repeat 2 42 0 5037 147 12 20 chr5 13407858 13409145 -186221005 + L1PA13 LINE L1 4864 6142 -21 1509 174 0 46 chr5 13410473 13410729 -186219421 + AluJo SINE Alu 32 288 -24 208 0 0 0 chr5 13410729 13410752 -186219398 + (CAAAA)n Simple_repeat Simple_repeat 3 155 0 1509 174 0 46 chr5 13410752 13410776 -186219374 + AluJo SINE Alu 288 312 0 423 301 29 0 chr5 13411693 13411829 -186218321 + MIR SINE MIR 97 236 -26 1873 149 3 37 chr5 13411987 13412308 -186217842 + AluJb SINE Alu 1 310 -2 1049 171 23 0 chr5 13415063 13415238 -186214912 - AluSg/x SINE Alu -5 305 127 2312 91 0 0 chr5 13416881 13417178 -186212972 + AluY SINE Alu 1 297 -14 351 0 0 0 chr5 13417178 13417217 -186212933 + (TA)n Simple_repeat Simple_repeat 1 39 0 2139 171 13 50 chr5 13417294 13417724 -186212426 + L1MC3 LINE L1 7310 7722 -63 2217 112 10 0 chr5 13417724 13418018 -186212132 - AluSp SINE Alu -16 297 1 2139 171 13 50 chr5 13418018 13418062 -186212088 + L1MC3 LINE L1 7722 7766 -19 637 294 134 43 chr5 13418974 13419526 -186210624 + L1MEd LINE L1 285 886 -5233 1556 159 35 0 chr5 13421906 13422138 -186208012 + AluJo SINE Alu 37 276 -36 649 325 146 2 chr5 13423346 13423804 -186206346 + L2 LINE L2 2454 2977 -337 567 211 139 36 chr5 13423876 13424070 -186206080 + L2 LINE L2 3099 3312 -1 31 0 0 0 chr5 13425402 13425433 -186204717 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 13425502 13425534 -186204616 + AT_rich Low_complexity Low_complexity 1 32 0 277 288 62 0 chr5 13426448 13426528 -186203622 + MIR3 SINE MIR 124 208 0 355 275 265 28 chr5 13426935 13427119 -186203031 - L2 LINE L2 -9 3304 3165 1973 127 35 0 chr5 13427119 13427402 -186202748 - AluSc SINE Alu -16 293 1 355 275 265 28 chr5 13427402 13427613 -186202537 - L2 LINE L2 -148 3165 2815 286 284 0 23 chr5 13428980 13429068 -186201082 - MIR SINE MIR 0 262 177 1555 174 9 62 chr5 13429102 13429423 -186200727 + AluJo SINE Alu 1 304 -8 338 263 291 28 chr5 13430050 13430229 -186199921 - MIR SINE MIR -13 249 24 261 283 135 10 chr5 13430595 13430691 -186199459 + MIR SINE MIR 16 122 -95 1196 131 44 48 chr5 13430841 13431047 -186199103 - AluJo SINE Alu -102 210 6 260 270 0 0 chr5 13431086 13431149 -186199001 + MIR SINE MIR 177 239 -23 180 0 0 0 chr5 13432203 13432223 -186197927 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2064 125 3 19 chr5 13433270 13433581 -186196569 + AluSx SINE Alu 1 306 -6 2229 113 0 0 chr5 13433723 13434025 -186196125 - AluSc SINE Alu 0 309 8 221 300 30 80 chr5 13435004 13435104 -186195046 + MIR SINE MIR 21 115 -147 1145 135 140 0 chr5 13436521 13436728 -186193422 - MER46A DNA MER2_type 0 236 1 42 0 0 0 chr5 13437066 13437108 -186193042 + AT_rich Low_complexity Low_complexity 1 42 0 2483 82 0 3 chr5 13437248 13437554 -186192596 - AluSg SINE Alu -5 305 1 450 312 37 21 chr5 13438298 13438487 -186191663 - L2 LINE L2 -16 3297 3106 1589 146 3 106 chr5 13439169 13439490 -186190660 + AluJb SINE Alu 1 288 -14 27 73 0 0 chr5 13439824 13439879 -186190271 + AT_rich Low_complexity Low_complexity 1 55 0 1624 157 8 4 chr5 13440802 13441069 -186189081 - AluSx SINE Alu -3 309 42 285 332 72 10 chr5 13441665 13441858 -186188292 - MLT1I LTR MaLR -200 209 5 2104 135 0 7 chr5 13441901 13442205 -186187945 + AluSx SINE Alu 3 304 -8 1352 238 75 23 chr5 13442732 13443169 -186186981 + MLT1C LTR MaLR 2 461 -6 1543 150 0 0 chr5 13443447 13443667 -186186483 - AluSg/x SINE Alu -7 305 86 246 339 51 17 chr5 13444304 13444422 -186185728 - MIR SINE MIR -90 172 51 318 82 71 0 chr5 13444700 13444785 -186185365 + (CA)n Simple_repeat Simple_repeat 1 91 0 859 58 53 12 chr5 13444831 13445002 -186185148 + (CA)n Simple_repeat Simple_repeat 1 178 0 210 129 81 0 chr5 13445184 13445246 -186184904 + (TA)n Simple_repeat Simple_repeat 1 67 0 242 92 58 42 chr5 13445274 13445394 -186184756 + (TATAA)n Simple_repeat Simple_repeat 5 126 0 334 307 92 6 chr5 13445950 13446113 -186184037 + L1ME4a LINE L1 5923 6099 -22 2076 109 0 70 chr5 13446472 13446803 -186183347 + AluSg SINE Alu 1 308 -2 760 164 0 22 chr5 13448198 13448332 -186181818 + FLAM_C SINE Alu 1 131 -2 216 158 0 0 chr5 13448332 13448370 -186181780 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 549 0 0 0 chr5 13448370 13448431 -186181719 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 903 146 0 7 chr5 13448497 13448634 -186181516 + FRAM SINE Alu 23 158 -18 294 258 21 43 chr5 13449813 13449906 -186180244 + L2 LINE L2 3223 3313 0 337 308 67 47 chr5 13451742 13451995 -186178155 - L3 LINE CR1 -6 1571 1314 668 257 74 0 chr5 13452526 13452728 -186177422 + MER58A DNA MER1_type 2 218 -6 2273 75 0 26 chr5 13452730 13453069 -186177081 + AluY SINE Alu 1 311 0 2038 110 132 6 chr5 13454202 13454565 -186175585 - MSTA LTR MaLR -19 409 1 1587 154 0 54 chr5 13454845 13455143 -186175007 - AluJo SINE Alu -30 282 1 618 175 28 34 chr5 13455339 13455516 -186174634 - MER53 DNA DNA 0 189 14 189 264 19 0 chr5 13456642 13456695 -186173455 - MIR SINE MIR -2 260 207 1186 137 0 0 chr5 13456695 13456870 -186173280 - AluSg/x SINE Alu -5 307 133 255 267 40 0 chr5 13456870 13456945 -186173205 - MIR SINE MIR -48 214 137 360 0 0 0 chr5 13456945 13456985 -186173165 + (TTA)n Simple_repeat Simple_repeat 3 42 0 3646 39 2 0 chr5 13456985 13457421 -186172729 - L1PA4 LINE L1 -18 6137 5701 1633 19 0 0 chr5 13457421 13457631 -186172519 + L1P2 LINE L1 5268 5477 -678 576 242 32 38 chr5 13457636 13457793 -186172357 - MIR SINE MIR -106 156 1 661 302 154 31 chr5 13458615 13459361 -186170789 + L2 LINE L2 925 1762 -1552 30 0 0 0 chr5 13459395 13459425 -186170725 + AT_rich Low_complexity Low_complexity 1 30 0 404 210 48 32 chr5 13459436 13459560 -186170590 - MIR SINE MIR -25 237 112 621 254 155 9 chr5 13459571 13459803 -186170347 + L2 LINE L2 3043 3308 -5 26 0 0 0 chr5 13459860 13459886 -186170264 + AT_rich Low_complexity Low_complexity 1 26 0 2076 127 0 0 chr5 13459976 13460297 -186169853 - AluSx SINE Alu 0 321 1 2061 120 48 31 chr5 13460954 13461312 -186168838 - THE1B LTR MaLR 0 364 1 248 109 0 22 chr5 13462195 13462241 -186167909 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 42 0 0 chr5 13463510 13463534 -186166616 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1122 206 42 80 chr5 13463537 13463824 -186166326 - AluJo SINE Alu -34 278 3 288 245 162 91 chr5 13463991 13464155 -186165995 - L2 LINE L2 -835 2479 2287 448 152 13 0 chr5 13464155 13464234 -186165916 - MADE1 DNA Mariner 0 80 1 288 245 162 91 chr5 13464234 13464334 -186165816 - L2 LINE L2 -1027 2287 2196 685 175 56 94 chr5 13465755 13466075 -186164075 - Charlie2 DNA MER1_type -413 2449 2142 * 1998 227 93 25 chr5 13466074 13466718 -186163432 + MER72 LTR ERV1 10 697 -25 248 231 0 0 chr5 13466745 13466810 -186163340 - Charlie2 DNA MER1_type -711 2151 2087 204 132 85 151 chr5 13467316 13467422 -186162728 - MER5A DNA MER1_type -77 112 14 342 239 231 17 chr5 13468222 13468339 -186161811 - MER5A DNA MER1_type -2 187 46 1669 165 3 44 chr5 13468763 13469078 -186161072 - AluJb SINE Alu -6 306 5 1709 131 47 86 chr5 13469349 13469644 -186160506 - MLT1B LTR MaLR 0 390 114 2093 125 3 0 chr5 13469644 13469931 -186160219 - AluSx SINE Alu -24 288 1 1709 131 47 86 chr5 13469931 13470041 -186160109 - MLT1B LTR MaLR -276 114 1 2564 52 0 40 chr5 13470666 13470990 -186159160 + AluY SINE Alu 1 311 0 1209 141 187 38 chr5 13471015 13471277 -186158873 + AluSq SINE Alu 1 301 -2 194 286 79 0 chr5 13472083 13472146 -186158004 + L2 LINE L2 3246 3313 0 22 70 0 0 chr5 13472199 13472242 -186157908 + AT_rich Low_complexity Low_complexity 1 43 0 1199 137 43 0 chr5 13472249 13472460 -186157690 + L1MA6 LINE L1 5996 6215 -85 2465 63 3 0 chr5 13472470 13472769 -186157381 + AluSp SINE Alu 1 300 -13 2092 159 55 14 chr5 13472944 13473208 -186156942 - L1MB4 LINE L1 -3 6177 5886 1960 144 86 12 chr5 13473208 13473547 -186156603 + THE1B LTR MaLR 1 364 0 2092 159 55 14 chr5 13473547 13473721 -186156429 - L1MB4 LINE L1 -294 5886 5721 1477 164 0 4 chr5 13473728 13473960 -186156190 - AluJb SINE Alu 0 312 82 339 326 8 0 chr5 13474312 13474441 -186155709 - MLT1F LTR MaLR -393 149 20 695 155 28 14 chr5 13474673 13474815 -186155335 + L1MA6 LINE L1 6144 6287 -13 204 255 20 0 chr5 13475496 13475547 -186154603 + CT-rich Low_complexity Low_complexity 2 53 0 4039 102 18 55 chr5 13476102 13476760 -186153390 + MER51A LTR ERV1 1 634 0 408 262 18 24 chr5 13477121 13477285 -186152865 + (TA)n Simple_repeat Simple_repeat 1 163 0 183 42 0 0 chr5 13477321 13477345 -186152805 + (CA)n Simple_repeat Simple_repeat 1 24 0 2670 23 7 3 chr5 13479404 13479714 -186150436 - AluY SINE Alu 0 311 1 639 142 0 71 chr5 13479953 13480057 -186150093 + MLT1C LTR MaLR 350 445 -22 1542 167 106 6 chr5 13480057 13480387 -186149763 + MLT1A1 LTR MaLR 3 365 0 639 142 0 71 chr5 13480387 13480409 -186149741 + MLT1C LTR MaLR 445 467 0 308 274 149 56 chr5 13480894 13481215 -186148935 + L3 LINE CR1 587 937 -640 390 297 16 0 chr5 13481280 13481408 -186148742 + MIR SINE MIR 107 236 -26 469 346 34 14 chr5 13481666 13481874 -186148276 + L3 LINE CR1 1264 1475 -102 1671 170 10 17 chr5 13482203 13482497 -186147653 + AluJo SINE Alu 2 293 -19 2380 28 43 0 chr5 13484600 13484882 -186145268 + AluY SINE Alu 2 295 -16 186 43 0 0 chr5 13485031 13485054 -186145096 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 183 80 0 0 chr5 13486244 13486269 -186143881 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 237 65 0 0 chr5 13488914 13488945 -186141205 + (A)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr5 13489656 13489690 -186140460 + AT_rich Low_complexity Low_complexity 1 34 0 642 265 57 14 chr5 13489796 13490007 -186140143 - MIR SINE MIR -33 229 10 1985 111 0 4 chr5 13490366 13490628 -186139522 + AluSg SINE Alu 35 295 -15 36 23 0 0 chr5 13490831 13490874 -186139276 + AT_rich Low_complexity Low_complexity 1 43 0 922 132 7 0 chr5 13492902 13493046 -186137104 + L1PA10 LINE L1 6023 6167 -1 180 0 0 0 chr5 13493539 13493559 -186136591 + (T)n Simple_repeat Simple_repeat 1 20 0 344 285 158 23 chr5 13493613 13493834 -186136316 - MIR SINE MIR -11 251 1 2236 108 0 3 chr5 13493999 13494294 -186135856 + AluSg SINE Alu 1 294 -16 2447 203 38 9 chr5 13495082 13495717 -186134433 + L1MA6 LINE L1 2482 3134 -3012 7505 160 18 25 chr5 13495734 13498317 -186131833 + L1MA6 LINE L1 3730 6295 -5 25 0 0 0 chr5 13499071 13499096 -186131054 + AT_rich Low_complexity Low_complexity 1 25 0 195 42 0 0 chr5 13501492 13501516 -186128634 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2151 103 0 0 chr5 13501516 13501797 -186128353 - AluSq SINE Alu -32 281 1 818 194 0 0 chr5 13501798 13501932 -186128218 - AluJo SINE Alu -178 134 1 393 286 70 41 chr5 13501940 13502111 -186128039 + MIR SINE MIR 51 226 -36 1331 242 21 6 chr5 13503295 13503625 -186126525 - MER58B DNA MER1_type 0 341 7 23 33 0 0 chr5 13507139 13507169 -186122981 + AT_rich Low_complexity Low_complexity 1 30 0 360 322 61 22 chr5 13509201 13509381 -186120769 + MIR SINE MIR 25 211 -51 463 262 202 57 chr5 13510062 13510394 -186119756 - L2 LINE L2 -4 3309 2930 355 341 28 34 chr5 13510697 13510876 -186119274 - MER5A DNA MER1_type -3 186 9 544 206 0 9 chr5 13513215 13513322 -186116828 - MER5A DNA MER1_type -80 109 4 235 144 115 4 chr5 13513390 13513444 -186116706 - Alu SINE Alu -256 47 2 748 164 8 8 chr5 13513730 13513852 -186116298 - FLAM_A SINE Alu -10 123 2 261 279 81 68 chr5 13513986 13514147 -186116003 + MER5B DNA MER1_type 1 163 -15 261 0 0 0 chr5 13515252 13515281 -186114869 + (T)n Simple_repeat Simple_repeat 1 29 0 26 0 0 0 chr5 13515861 13515887 -186114263 + AT_rich Low_complexity Low_complexity 1 26 0 1715 163 82 18 chr5 13516368 13516711 -186113439 + MLT1A1 LTR MaLR 1 365 0 315 0 0 0 chr5 13516789 13516824 -186113326 + (TG)n Simple_repeat Simple_repeat 2 36 0 2245 107 0 19 chr5 13517521 13517831 -186112319 - AluSg SINE Alu -6 304 1 546 297 17 17 chr5 13519830 13520005 -186110145 + MIR SINE MIR 18 192 -70 21 71 0 0 chr5 13520008 13520050 -186110100 + AT_rich Low_complexity Low_complexity 1 42 0 1509 321 51 34 chr5 13521347 13522103 -186108047 + L2 LINE L2 2269 3036 -277 2281 84 0 0 chr5 13522162 13522489 -186107661 + AluY SINE Alu 1 327 0 821 120 0 0 chr5 13522489 13522614 -186107536 + L1PA16 LINE L1 6034 6158 -8 261 308 179 0 chr5 13522673 13522790 -186107360 + L2 LINE L2 3167 3304 -9 1829 129 4 14 chr5 13522793 13523072 -186107078 + AluSx SINE Alu 1 276 -36 459 0 0 0 chr5 13523072 13523123 -186107027 + (TG)n Simple_repeat Simple_repeat 2 52 0 484 290 116 99 chr5 13525101 13525639 -186104511 - L1M2 LINE L1 -5708 1141 585 216 0 0 0 chr5 13525639 13525663 -186104487 + (CGG)n Simple_repeat Simple_repeat 3 26 0 484 290 116 99 chr5 13525663 13525885 -186104265 - L1M2 LINE L1 -6264 585 368 203 204 0 23 chr5 13527084 13527128 -186103022 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 417 206 186 0 chr5 13527191 13527288 -186102862 + L2 LINE L2 3192 3306 -7 621 262 12 23 chr5 13527491 13527663 -186102487 + MER5B DNA MER1_type 7 176 -2 393 253 74 79 chr5 13527675 13527865 -186102285 + MER5A DNA MER1_type 1 189 0 344 271 12 0 chr5 13527881 13527966 -186102184 - MER5A DNA MER1_type -87 102 17 593 219 84 11 chr5 13528786 13528964 -186101186 + MER3 DNA MER1_type 19 209 0 1468 156 58 56 chr5 13530204 13530564 -186099586 + MER46B DNA MER2_type 1 236 0 226 214 0 0 chr5 13532529 13532571 -186097579 + GA-rich Low_complexity Low_complexity 1 42 0 695 264 153 42 chr5 13534288 13534836 -186095314 + L2 LINE L2 2687 3312 -1 25 0 0 0 chr5 13537853 13537878 -186092272 + AT_rich Low_complexity Low_complexity 1 25 0 204 304 94 47 chr5 13541197 13541368 -186088782 - MIR SINE MIR -56 206 28 442 313 99 30 chr5 13542060 13542293 -186087857 - MIR SINE MIR 0 262 14 2762 70 3 8 chr5 13543510 13543879 -186086271 - L1PA8 LINE L1 -1 6171 5805 224 303 11 11 chr5 13544343 13544432 -186085718 + L2 LINE L2 2968 3056 -257 328 136 136 12 chr5 13544451 13544532 -186085618 - Charlie1 DNA MER1_type -1 2760 2670 621 275 38 0 chr5 13544557 13544768 -186085382 - Charlie1 DNA MER1_type -2536 225 7 217 296 70 26 chr5 13544790 13544905 -186085245 + L2 LINE L2 3106 3225 -88 2174 122 26 0 chr5 13545082 13545386 -186084764 - AluSx SINE Alu 0 312 1 989 193 17 0 chr5 13545895 13546076 -186084074 + AluSc SINE Alu 117 300 -9 1976 116 7 0 chr5 13546371 13546646 -186083504 + AluSq SINE Alu 29 305 -8 417 173 27 55 chr5 13548437 13548547 -186081603 + LTR33 LTR ERVL 114 220 -301 421 296 40 11 chr5 13548563 13548739 -186081411 + LTR33 LTR ERVL 341 521 0 403 343 85 45 chr5 13549618 13550256 -186079894 - L1M4 LINE L1 -3216 2930 2268 24 0 0 0 chr5 13550477 13550501 -186079649 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 13550931 13550952 -186079198 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr5 13551032 13551076 -186079074 + AT_rich Low_complexity Low_complexity 1 44 0 2234 114 0 7 chr5 13551351 13551648 -186078502 - AluSg SINE Alu -15 295 1 24 67 0 0 chr5 13553762 13553807 -186076343 + AT_rich Low_complexity Low_complexity 1 45 0 289 310 44 44 chr5 13554033 13554191 -186075959 - MER5A DNA MER1_type -1 188 31 * 358 314 26 39 chr5 13554054 13554210 -186075940 + MER5A DNA MER1_type 35 188 -1 1241 239 136 21 chr5 13554393 13554828 -186075322 + MLT1D LTR MaLR 21 505 0 198 288 201 29 chr5 13554910 13555049 -186075101 - MIR SINE MIR -48 214 52 4698 100 29 0 chr5 13555077 13555758 -186074392 - L1PA14 LINE L1 0 6161 5461 1334 212 0 47 chr5 13555810 13556107 -186074043 + AluJo SINE Alu 13 295 -17 28 0 0 0 chr5 13556769 13556797 -186073353 + AT_rich Low_complexity Low_complexity 1 28 0 559 309 78 9 chr5 13557534 13557751 -186072399 - MIR SINE MIR -2 260 29 383 240 12 29 chr5 13557781 13557952 -186072198 + L1ME LINE L1 5135 5302 -844 572 291 97 15 chr5 13558010 13558402 -186071748 + L1ME LINE L1 5350 5773 -397 2319 123 5 46 chr5 13558428 13558601 -186071549 + HSMAR2 DNA Mariner 2 181 -1121 2213 95 3 0 chr5 13558601 13558920 -186071230 + AluSp SINE Alu 1 320 0 2319 123 5 46 chr5 13558920 13559161 -186070989 + HSMAR2 DNA Mariner 181 400 -902 402 100 29 0 chr5 13559195 13559265 -186070885 + HSMAR2 DNA Mariner 1230 1301 -1 345 205 0 0 chr5 13559435 13559547 -186070603 + (TA)n Simple_repeat Simple_repeat 1 112 0 2073 128 3 3 chr5 13560519 13560824 -186069326 + AluSg SINE Alu 1 305 -5 472 288 58 17 chr5 13561529 13561769 -186068381 + MER41B LTR ERV1 181 430 -205 365 258 25 55 chr5 13562328 13562476 -186067674 + MIR SINE MIR 93 233 -29 1483 213 241 13 chr5 13564574 13564929 -186065221 + L1MD2 LINE L1 5687 5960 -399 231 114 0 0 chr5 13564929 13564964 -186065186 + (CA)n Simple_repeat Simple_repeat 2 36 0 1483 213 241 13 chr5 13564964 13565143 -186065007 + L1MD2 LINE L1 5960 6343 -16 190 179 36 0 chr5 13565290 13565346 -186064804 + GA-rich Low_complexity Low_complexity 3 60 0 1931 183 121 7 chr5 13566285 13566716 -186063434 + MER31A LTR ERV1 1 480 -5 4894 204 47 21 chr5 13566815 13567752 -186062398 + MER45B DNA AcHobo 2 968 -613 2127 141 0 7 chr5 13567752 13568056 -186062094 - AluSx SINE Alu -10 302 1 4894 204 47 21 chr5 13568056 13568120 -186062030 + MER45B DNA AcHobo 968 1029 -11 2863 77 9 0 chr5 13568322 13568672 -186061478 - THE1A LTR MaLR -2 353 1 199 309 49 89 chr5 13568928 13569051 -186061099 + L2 LINE L2 3063 3180 -92 2167 123 3 0 chr5 13570446 13570747 -186059403 + AluSg SINE Alu 1 302 -8 931 275 90 51 chr5 13571823 13572357 -186057793 + MLT1H1 LTR MaLR 1 555 0 21 57 0 0 chr5 13572514 13572549 -186057601 + AT_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr5 13572598 13572618 -186057532 + (T)n Simple_repeat Simple_repeat 1 20 0 2358 83 0 7 chr5 13573439 13573739 -186056411 + AluY SINE Alu 1 298 -13 2629 249 30 31 chr5 13573759 13573899 -186056251 + L1ME2 LINE L1 5381 5520 -644 2448 166 36 24 chr5 13573899 13574320 -186055830 - MSTB LTR MaLR 0 426 1 2629 249 30 31 chr5 13574320 13574766 -186055384 + L1ME2 LINE L1 5520 5968 -196 183 80 0 0 chr5 13574766 13574791 -186055359 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2629 249 30 31 chr5 13574791 13574978 -186055172 + L1ME2 LINE L1 5968 6154 -10 3081 48 11 0 chr5 13575524 13575875 -186054275 + THE1A LTR MaLR 1 355 0 302 225 50 6 chr5 13575920 13576080 -186054070 + (TG)n Simple_repeat Simple_repeat 1 167 0 234 174 33 16 chr5 13576120 13576241 -186053909 + (TG)n Simple_repeat Simple_repeat 1 123 0 236 211 24 10 chr5 13576252 13576437 -186053713 + (TG)n Simple_repeat Simple_repeat 1 212 0 305 273 35 6 chr5 13576480 13576652 -186053498 + (TG)n Simple_repeat Simple_repeat 1 177 0 258 279 35 6 chr5 13576832 13577004 -186053146 + (TG)n Simple_repeat Simple_repeat 1 177 0 366 233 47 6 chr5 13577111 13577283 -186052867 + (TG)n Simple_repeat Simple_repeat 1 179 0 246 290 35 0 chr5 13577302 13577447 -186052703 + (TG)n Simple_repeat Simple_repeat 2 151 0 215 244 116 58 chr5 13577639 13577811 -186052339 - L2 LINE L2 -783 2531 2350 332 241 46 19 chr5 13577836 13577944 -186052206 - L2 LINE L2 -1 3312 3202 287 195 78 109 chr5 13577917 13578045 -186052105 + L2 LINE L2 3189 3312 -1 * 1742 151 177 45 chr5 13578060 13578438 -186051712 - MSTA LTR MaLR 0 428 1 3822 135 8 12 chr5 13578438 13579032 -186051118 - MSTA-int LTR MaLR 0 1580 989 1975 156 178 6 chr5 13579034 13579399 -186050751 + MSTA LTR MaLR 1 428 0 821 156 106 110 chr5 13579649 13579867 -186050283 + MER58A DNA MER1_type 4 220 -4 21 36 0 0 chr5 13579929 13579957 -186050193 + AT_rich Low_complexity Low_complexity 1 28 0 1825 202 14 16 chr5 13580000 13580366 -186049784 - MLT1A1 LTR MaLR 0 365 1 360 0 0 0 chr5 13580826 13580866 -186049284 + (CA)n Simple_repeat Simple_repeat 2 41 0 284 289 40 59 chr5 13580993 13581145 -186049005 - MARNA DNA Mariner -352 234 86 707 344 74 40 chr5 13581882 13582575 -186047575 + L2 LINE L2 2525 3248 -24 671 301 31 9 chr5 13582823 13583052 -186047098 + MIR SINE MIR 8 241 -21 219 36 0 0 chr5 13583196 13583224 -186046926 + (CAAG)n Simple_repeat Simple_repeat 3 30 0 318 169 96 36 chr5 13583601 13583684 -186046466 + MER69 DNA AcHobo 2430 2517 -9 194 105 26 0 chr5 13583758 13583796 -186046354 + (TG)n Simple_repeat Simple_repeat 2 40 0 221 57 29 0 chr5 13583831 13583866 -186046284 + (TG)n Simple_repeat Simple_repeat 2 37 0 344 50 0 0 chr5 13583982 13584022 -186046128 - THE1B LTR MaLR 0 355 316 2356 100 31 31 chr5 13584023 13584372 -186045778 - THE1B LTR MaLR -15 349 1 520 337 36 8 chr5 13584588 13584840 -186045310 - MIR SINE MIR -2 260 2 1929 113 28 7 chr5 13586854 13587104 -186043046 + AluSg SINE Alu 1 259 -51 207 0 0 0 chr5 13587104 13587127 -186043023 + (CAGCC)n Simple_repeat Simple_repeat 5 27 0 1929 113 28 7 chr5 13587127 13587160 -186042990 + AluSg SINE Alu 259 290 -20 913 142 32 53 chr5 13587417 13587607 -186042543 - MER53 DNA DNA -1 188 3 198 268 119 3 chr5 13588712 13588816 -186041334 + MIR SINE MIR 32 147 -101 21 0 0 0 chr5 13589209 13589230 -186040920 + AT_rich Low_complexity Low_complexity 1 21 0 542 259 114 15 chr5 13589246 13589447 -186040703 - MIR SINE MIR -40 222 2 1906 158 23 0 chr5 13589700 13590003 -186040147 + AluJo SINE Alu 1 310 -2 4791 204 102 36 chr5 13590434 13591175 -186038975 - Charlie1a DNA MER1_type -1307 1454 764 14499 36 1 0 chr5 13591175 13593591 -186036559 - L1PA4 LINE L1 -1 6154 3737 4791 204 102 36 chr5 13593591 13594206 -186035944 - Charlie1a DNA MER1_type -1997 764 8 291 270 6 103 chr5 13595014 13595188 -186034962 + MIR SINE MIR 78 234 -28 1804 176 91 38 chr5 13595214 13595405 -186034745 - MLT1C LTR MaLR -47 420 241 2382 131 27 21 chr5 13595405 13595778 -186034372 - THE1C LTR MaLR 0 375 1 1804 176 91 38 chr5 13595778 13595983 -186034167 - MLT1C LTR MaLR -226 241 3 180 282 30 92 chr5 13596083 13596214 -186033936 - L2 LINE L2 -843 2471 2349 213 217 0 0 chr5 13596353 13596399 -186033751 - L2 LINE L2 -1 3312 3267 22 35 0 0 chr5 13596886 13596915 -186033235 + AT_rich Low_complexity Low_complexity 1 29 0 237 281 99 53 chr5 13598207 13598378 -186031772 + MLT1K LTR MaLR 169 347 -241 210 306 16 0 chr5 13598920 13598982 -186031168 - L2 LINE L2 -29 3243 3181 291 164 0 0 chr5 13599305 13599366 -186030784 + T-rich Low_complexity Low_complexity 1 61 0 2113 141 74 52 chr5 13600659 13601064 -186029086 - MLT2D LTR ERVL 0 414 1 695 298 91 32 chr5 13601107 13601571 -186028579 - L1ME2 LINE L1 -278 5886 5384 313 331 111 12 chr5 13601645 13601817 -186028333 + MIR SINE MIR 33 221 -41 241 244 79 8 chr5 13602010 13602137 -186028013 - L1ME2 LINE L1 -1090 5056 4921 1694 175 79 70 chr5 13602781 13603222 -186026928 - MER31B LTR ERV1 -21 445 1 4062 88 30 2 chr5 13603368 13603905 -186026245 + L1PA10 LINE L1 5616 6167 -1 2430 100 0 0 chr5 13604467 13604777 -186025373 - AluSg SINE Alu 0 310 1 202 265 0 0 chr5 13605855 13605904 -186024246 - L2 LINE L2 -18 3295 3247 744 173 95 31 chr5 13606015 13606235 -186023915 + MLT1G1 LTR MaLR 270 487 -18 2039 175 25 48 chr5 13606235 13606634 -186023516 + MLT1B LTR MaLR 1 390 0 744 173 95 31 chr5 13606634 13606646 -186023504 + MLT1G1 LTR MaLR 487 497 -8 1412 213 37 48 chr5 13607482 13607858 -186022292 + MLT1A2 LTR MaLR 3 374 0 926 283 172 40 chr5 13608088 13608129 -186022021 - L2 LINE L2 -526 2788 2754 2829 119 21 26 chr5 13608129 13608556 -186021594 + MSTA LTR MaLR 1 425 -3 926 283 172 40 chr5 13608556 13609020 -186021130 - L2 LINE L2 -560 2754 2216 350 285 39 23 chr5 13609023 13609153 -186020997 - MER94 DNA DNA -2 132 1 608 220 93 9 chr5 13609168 13609382 -186020768 - L2 LINE L2 -1102 2212 1981 288 269 52 30 chr5 13609382 13609516 -186020634 + L2 LINE L2 2119 2255 -1059 368 266 221 16 chr5 13609590 13609834 -186020316 + L2 LINE L2 3020 3313 0 1871 146 11 0 chr5 13610340 13610670 -186019480 + AluSx SINE Alu 1 333 0 21 0 0 0 chr5 13610772 13610793 -186019357 + AT_rich Low_complexity Low_complexity 1 21 0 1457 235 43 56 chr5 13611114 13611582 -186018568 - MLT1C LTR MaLR 0 467 6 678 225 89 0 chr5 13611602 13611815 -186018335 - L2 LINE L2 -1102 2212 1981 304 261 52 30 chr5 13611815 13611949 -186018201 + L2 LINE L2 2119 2255 -1059 861 231 18 27 chr5 13612835 13613060 -186017090 + MIR SINE MIR 15 237 -25 22 35 0 0 chr5 13614900 13614929 -186015221 + AT_rich Low_complexity Low_complexity 1 29 0 1735 175 68 22 chr5 13614947 13615312 -186014838 - MER58D DNA MER1_type -3 383 2 32 57 0 0 chr5 13616122 13616175 -186013975 + AT_rich Low_complexity Low_complexity 1 53 0 403 229 18 9 chr5 13616892 13617001 -186013149 - MER112 DNA MER1_type -12 248 139 647 311 18 5 chr5 13618924 13619143 -186011007 - MIR SINE MIR -38 224 3 1768 150 0 64 chr5 13619541 13619868 -186010282 - AluSx SINE Alu -4 308 3 2338 86 0 0 chr5 13620992 13621284 -186008866 + AluSx SINE Alu 1 292 -20 2279 100 0 19 chr5 13622161 13622472 -186007678 + AluSg SINE Alu 1 305 -5 1873 158 0 10 chr5 13623219 13623523 -186006627 - AluSx SINE Alu -11 301 1 249 365 48 12 chr5 13623570 13623737 -186006413 + MIR SINE MIR 1 173 -89 524 212 0 0 chr5 13623747 13623832 -186006318 + MER58A DNA MER1_type 7 91 -16 630 162 52 15 chr5 13623838 13623974 -186006176 - MLT1C LTR MaLR -326 141 1 453 306 115 25 chr5 13624117 13624395 -186005755 + L3 LINE CR1 882 1184 -393 282 95 0 0 chr5 13624637 13624679 -186005471 + (CA)n Simple_repeat Simple_repeat 1 42 0 341 284 58 0 chr5 13624680 13624835 -186005315 - L1ME4a LINE L1 -201 5920 5757 2654 61 0 0 chr5 13625379 13625690 -186004460 - AluY SINE Alu 0 311 1 1186 190 125 31 chr5 13625690 13626093 -186004057 - LTR54B LTR ERV1 -19 491 81 664 181 110 1 chr5 13627395 13627619 -186002531 + MSTD LTR MaLR 1 277 -119 437 258 131 28 chr5 13628544 13628865 -186001285 - MLT1F LTR MaLR -15 527 231 775 172 0 0 chr5 13628909 13629031 -186001119 - MLT2C2 LTR ERVL -48 416 295 860 187 7 0 chr5 13629037 13629192 -186000958 - MLT2C1 LTR ERVL -215 182 27 2040 124 66 30 chr5 13630445 13630807 -185999343 + THE1C LTR MaLR 1 375 0 1223 190 14 23 chr5 13631140 13631361 -185998789 + MER20 DNA MER1_type 1 219 0 357 298 48 42 chr5 13631624 13631792 -185998358 - L2 LINE L2 -18 3295 3127 208 373 78 25 chr5 13632183 13632387 -185997763 - L2 LINE L2 -549 2765 2551 435 138 25 38 chr5 13633318 13633398 -185996752 - MER20 DNA MER1_type 0 219 141 2319 117 47 36 chr5 13634499 13634859 -185995291 - THE1B LTR MaLR 0 364 1 475 306 40 69 chr5 13635401 13635651 -185994499 + MIR SINE MIR 6 251 -11 27 29 0 0 chr5 13636203 13636237 -185993913 + AT_rich Low_complexity Low_complexity 1 34 0 1091 261 78 7 chr5 13636540 13636987 -185993163 + MER119 DNA MER1_type 6 581 -2 26 30 0 0 chr5 13637050 13637083 -185993067 + AT_rich Low_complexity Low_complexity 1 33 0 1981 155 3 0 chr5 13637354 13637650 -185992500 + AluJo SINE Alu 1 297 -15 240 35 0 0 chr5 13637650 13637679 -185992471 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 324 0 0 0 chr5 13637678 13637714 -185992436 + (GA)n Simple_repeat Simple_repeat 2 37 0 1534 221 42 16 chr5 13638544 13638924 -185991226 + MER90 LTR ERV1 225 614 0 254 256 29 12 chr5 13639667 13639839 -185990311 + (TA)n Simple_repeat Simple_repeat 2 176 0 313 260 175 15 chr5 13640823 13641023 -185989127 + L2 LINE L2 2470 2701 -613 243 298 35 0 chr5 13641031 13641130 -185989020 - L1ME2 LINE L1 -10 6324 6065 382 268 159 78 chr5 13641131 13641512 -185988638 + L2 LINE L2 2690 3140 -173 1515 188 124 28 chr5 13641512 13641938 -185988212 - MLT1C LTR MaLR 0 467 1 382 268 159 78 chr5 13641938 13642058 -185988092 + L2 LINE L2 3140 3249 -64 1724 201 64 31 chr5 13642421 13642904 -185987246 - MLT1D LTR MaLR 0 505 7 2370 99 7 0 chr5 13643586 13643890 -185986260 + AluSx SINE Alu 1 306 -6 382 267 43 105 chr5 13644682 13644959 -185985191 - MIR SINE MIR -1 261 2 222 316 24 97 chr5 13645211 13645417 -185984733 - MIR SINE MIR -50 212 22 787 211 43 0 chr5 13645499 13645684 -185984466 - MER20 DNA MER1_type 0 219 27 224 204 0 56 chr5 13646882 13646936 -185983214 - L2 LINE L2 -546 2768 2718 465 143 41 21 chr5 13646990 13647469 -185982681 + (TG)n Simple_repeat Simple_repeat 1 488 0 750 108 43 14 chr5 13647492 13648063 -185982087 + (TG)n Simple_repeat Simple_repeat 1 587 0 203 190 0 35 chr5 13648421 13648479 -185981671 + (CAGGG)n Simple_repeat Simple_repeat 3 58 0 283 188 0 25 chr5 13649408 13649488 -185980662 + (TATATG)n Simple_repeat Simple_repeat 3 80 0 1128 143 0 30 chr5 13650508 13650676 -185979474 + FRAM SINE Alu 3 165 -1 2538 74 0 0 chr5 13650852 13651162 -185978988 + AluY SINE Alu 1 310 -1 916 204 82 0 chr5 13652465 13652661 -185977489 + MER20 DNA MER1_type 1 212 -7 1745 167 89 30 chr5 13653017 13653412 -185976738 - LTR52 LTR ERVL -3 418 1 428 308 62 7 chr5 13653675 13653821 -185976329 + MIR SINE MIR 61 214 -48 333 229 0 0 chr5 13653914 13654019 -185976131 + (TG)n Simple_repeat Simple_repeat 1 105 0 327 85 0 0 chr5 13654412 13654459 -185975691 + (CA)n Simple_repeat Simple_repeat 1 47 0 2189 99 50 0 chr5 13655389 13655672 -185974478 - AluSc SINE Alu -12 297 1 1065 252 71 27 chr5 13656652 13657069 -185973081 - L1MEc LINE L1 -4904 1492 1095 185 0 40 0 chr5 13657069 13657094 -185973056 + (TTATA)n Simple_repeat Simple_repeat 1 26 0 2955 57 6 0 chr5 13657094 13657444 -185972706 - L1PA7 LINE L1 -19 6135 5784 1065 252 71 27 chr5 13657444 13657505 -185972645 - L1MEc LINE L1 -5300 1096 992 419 100 14 0 chr5 13657663 13657733 -185972417 + (GA)n Simple_repeat Simple_repeat 2 72 0 222 288 4 44 chr5 13657990 13658089 -185972061 - MIR SINE MIR -61 147 52 243 0 0 0 chr5 13659037 13659064 -185971086 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 327 285 23 15 chr5 13660339 13660469 -185969681 + L1ME4a LINE L1 5773 5903 -218 223 292 14 0 chr5 13660851 13660923 -185969227 + (TA)n Simple_repeat Simple_repeat 2 74 0 333 0 0 0 chr5 13662796 13662833 -185967317 + (TG)n Simple_repeat Simple_repeat 2 38 0 2501 90 0 0 chr5 13663879 13664190 -185965960 - AluSx SINE Alu -1 311 1 2106 132 10 0 chr5 13664297 13664601 -185965549 + AluSx SINE Alu 1 307 -5 935 217 14 5 chr5 13666229 13666446 -185963704 + MER20 DNA MER1_type 1 219 0 557 322 55 0 chr5 13667065 13667267 -185962883 + L1ME LINE L1 5588 5800 -321 473 267 60 0 chr5 13667425 13667575 -185962575 + MER97c DNA MER1_type? 20 178 -912 763 261 101 13 chr5 13667626 13667932 -185962218 + MLT1J LTR MaLR 40 372 -139 522 272 60 30 chr5 13672537 13672718 -185957432 + MIR SINE MIR 11 202 -60 1799 197 43 47 chr5 13672718 13672757 -185957393 + MLT1D LTR MaLR 1 39 -466 2484 67 0 10 chr5 13672757 13673056 -185957094 - AluY SINE Alu -14 297 2 1799 197 43 47 chr5 13673056 13673523 -185956627 + MLT1D LTR MaLR 39 505 0 522 272 60 30 chr5 13673523 13673576 -185956574 + MIR SINE MIR 202 252 -10 589 249 14 84 chr5 13673600 13673769 -185956381 + MIR SINE MIR 2 151 -111 2436 87 3 6 chr5 13673769 13674081 -185956069 + AluY SINE Alu 1 311 0 589 249 14 84 chr5 13674081 13674152 -185955998 + MIR SINE MIR 151 225 -37 877 264 5 5 chr5 13674205 13674421 -185955729 + MER58A DNA MER1_type 2 217 -7 346 207 37 24 chr5 13676720 13676802 -185953348 + MER5B DNA MER1_type 90 172 -6 209 367 24 12 chr5 13676948 13677117 -185953033 - MER5B DNA MER1_type -4 174 4 998 200 19 23 chr5 13677132 13677347 -185952803 + MER20 DNA MER1_type 5 218 -1 2131 113 0 36 chr5 13677686 13677995 -185952155 + AluSx SINE Alu 3 300 -12 438 225 116 7 chr5 13679368 13679506 -185950644 - MER5A DNA MER1_type -4 185 33 239 220 250 30 chr5 13679676 13679776 -185950374 - MIR SINE MIR -70 192 71 21 36 0 0 chr5 13680102 13680130 -185950020 + AT_rich Low_complexity Low_complexity 1 28 0 187 323 86 21 chr5 13682873 13682966 -185947184 + L2 LINE L2 3149 3247 -25 227 140 0 60 chr5 13683576 13683626 -185946524 - L1M3e LINE L1 -5955 1075 1029 557 163 8 57 chr5 13684289 13684412 -185945738 + MER20 DNA MER1_type 56 172 -47 203 186 12 116 chr5 13684517 13684603 -185945547 - MER5A DNA MER1_type -2 187 111 716 253 29 6 chr5 13685429 13685603 -185944547 - MER58C DNA MER1_type 0 215 38 2491 71 3 0 chr5 13686928 13687224 -185942926 + AluSp SINE Alu 1 297 -16 247 336 57 8 chr5 13687399 13687521 -185942629 - L2 LINE L2 -11 3261 3134 989 234 42 73 chr5 13688468 13688852 -185941298 + MLT1E2-int LTR MaLR 1000 1371 0 1503 241 109 66 chr5 13688852 13689446 -185940704 + MLT1E2 LTR MaLR 1 620 -6 720 65 75 0 chr5 13689630 13690243 -185939907 + (TA)n Simple_repeat Simple_repeat 1 658 0 2474 63 0 7 chr5 13692414 13692715 -185937435 + AluY SINE Alu 1 299 -12 1455 211 39 14 chr5 13693229 13693585 -185936565 + MLT1A1 LTR MaLR 1 365 0 2256 124 3 0 chr5 13694253 13694560 -185935590 - AluSp SINE Alu -5 308 1 1463 248 86 79 chr5 13694809 13695429 -185934721 + MLT1E2 LTR MaLR 1 626 0 1189 198 27 7 chr5 13696845 13697163 -185932987 + MLT1A1 LTR MaLR 1 357 -8 326 264 87 28 chr5 13697486 13697740 -185932410 + L2 LINE L2 2458 2781 -533 488 237 53 0 chr5 13697891 13698022 -185932128 + L2 LINE L2 3168 3305 -8 1290 229 97 26 chr5 13698758 13699327 -185930823 - MLT1E2 LTR MaLR 0 626 1 1809 144 0 0 chr5 13699912 13700169 -185929981 - AluSx SINE Alu -55 257 1 1614 189 114 43 chr5 13700625 13701091 -185929059 - MLT1D LTR MaLR -5 500 2 27 29 0 0 chr5 13701723 13701757 -185928393 + AT_rich Low_complexity Low_complexity 1 34 0 1913 180 3 0 chr5 13701856 13702162 -185927988 - AluJb SINE Alu -5 307 1 2139 151 56 8 chr5 13702714 13703092 -185927058 + MSTD LTR MaLR 1 396 0 2457 36 4 0 chr5 13703517 13703797 -185926353 - AluY SINE Alu -7 304 24 239 247 49 35 chr5 13703804 13703905 -185926245 + MIR SINE MIR 64 162 -46 2342 171 58 18 chr5 13704184 13704633 -185925517 - MLT1C LTR MaLR 0 467 1 603 162 20 116 chr5 13705937 13706039 -185924111 + MER96B DNA MER1_type? 1 76 -341 455 116 70 0 chr5 13706039 13706125 -185924025 - L1MB3 LINE L1 -9 6174 6083 603 162 20 116 chr5 13706125 13706220 -185923930 + MER96B DNA MER1_type? 76 179 -238 285 236 14 0 chr5 13706280 13706352 -185923798 - MIR SINE MIR -115 147 75 191 325 0 26 chr5 13707055 13707132 -185923018 + L2 LINE L2 3185 3259 -13 290 370 16 16 chr5 13707286 13707470 -185922680 + MIR SINE MIR 8 191 -71 212 360 26 9 chr5 13708298 13708412 -185921738 - L2 LINE L2 -328 2944 2829 1152 276 95 9 chr5 13708689 13709142 -185921008 + L1MC4 LINE L1 5566 6057 -1985 * 2341 197 14 0 chr5 13708801 13709247 -185920903 + L1MB5 LINE L1 5716 6167 -7 2386 90 6 0 chr5 13711523 13711834 -185918316 - AluSq SINE Alu 0 313 1 1363 175 4 41 chr5 13713214 13713482 -185916668 + Tigger3(Golem) DNA MER2_type 2772 3029 0 2226 118 7 0 chr5 13713890 13714187 -185915963 + AluSx SINE Alu 1 299 -13 1988 189 52 18 chr5 13715553 13715998 -185914152 - MLT1C LTR MaLR -2 465 6 683 288 16 0 chr5 13722016 13722200 -185907950 + MER58A DNA MER1_type 30 216 -8 1974 131 0 11 chr5 13722778 13723061 -185907089 + AluSg SINE Alu 1 280 -30 180 111 0 0 chr5 13723065 13723092 -185907058 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 387 41 0 0 chr5 13723793 13723842 -185906308 + (CA)n Simple_repeat Simple_repeat 2 50 0 1293 208 79 22 chr5 13723963 13724444 -185905706 + MLT1F1 LTR MaLR 3 559 -8 1675 201 137 27 chr5 13724800 13725247 -185904903 - MLT1D LTR MaLR -8 497 2 183 80 0 0 chr5 13725350 13725375 -185904775 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 236 318 24 0 chr5 13725380 13725465 -185904685 - L2 LINE L2 -22 3291 3205 477 301 67 16 chr5 13725487 13725680 -185904470 + L2 LINE L2 2864 3066 -247 22 35 0 0 chr5 13726586 13726615 -185903535 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 13726982 13727024 -185903126 + AT_rich Low_complexity Low_complexity 1 42 0 2362 80 7 3 chr5 13727155 13727455 -185902695 - AluY SINE Alu -10 301 1 1693 181 0 32 chr5 13728605 13728914 -185901236 - AluJb SINE Alu -13 299 1 231 88 0 0 chr5 13729723 13729757 -185900393 + (GA)n Simple_repeat Simple_repeat 1 34 0 2050 176 74 49 chr5 13729810 13730282 -185899868 + MER110 LTR ERV1 8 491 0 466 230 197 7 chr5 13730885 13731037 -185899113 - MIR SINE MIR -3 259 79 359 204 20 20 chr5 13731295 13731393 -185898757 - L1MA8 LINE L1 -5 6286 6189 324 70 0 0 chr5 13731470 13731513 -185898637 + (CA)n Simple_repeat Simple_repeat 2 44 0 2605 129 3 6 chr5 13731652 13732017 -185898133 - THE1B LTR MaLR 0 364 1 239 351 92 7 chr5 13732086 13732270 -185897880 - MIR SINE MIR -57 205 6 268 315 82 20 chr5 13732652 13732798 -185897352 - L2 LINE L2 -203 3069 2915 296 136 254 0 chr5 13732932 13732991 -185897159 - MADE1 DNA Mariner 0 80 7 299 271 17 59 chr5 13733010 13733128 -185897022 - MER5B DNA MER1_type -33 145 33 208 188 21 21 chr5 13733306 13733354 -185896796 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 234 260 65 65 chr5 13734068 13734191 -185895959 + LTR33 LTR ERVL 99 221 -300 200 346 59 20 chr5 13734440 13734541 -185895609 - L2 LINE L2 -508 2806 2702 678 223 0 7 chr5 13734649 13734788 -185895362 - L1MB5 LINE L1 -3 6171 6034 513 299 226 26 chr5 13734796 13735331 -185894819 - L2 LINE L2 -609 2705 2064 24 0 0 0 chr5 13736534 13736558 -185893592 + AT_rich Low_complexity Low_complexity 1 24 0 249 193 53 0 chr5 13736564 13736621 -185893529 - MIR SINE MIR -17 245 186 372 316 95 7 chr5 13736634 13736946 -185893204 - L1ME LINE L1 -453 5668 5318 30 77 0 0 chr5 13738412 13738477 -185891673 + AT_rich Low_complexity Low_complexity 1 65 0 186 405 101 0 chr5 13739292 13739440 -185890710 - L2 LINE L2 -4 3268 3106 1250 113 0 27 chr5 13740049 13740235 -185889915 + AluSg/x SINE Alu 132 312 0 645 122 0 0 chr5 13740344 13740426 -185889724 - AluS SINE Alu -228 84 3 26 0 0 0 chr5 13740656 13740682 -185889468 + AT_rich Low_complexity Low_complexity 1 26 0 1946 141 82 25 chr5 13740948 13741303 -185888847 + THE1C LTR MaLR 1 375 0 874 96 39 31 chr5 13742558 13743171 -185886979 + (TG)n Simple_repeat Simple_repeat 1 617 0 2365 102 0 3 chr5 13744454 13744767 -185885383 - AluSq SINE Alu -1 312 1 243 191 0 0 chr5 13744779 13744842 -185885308 + CT-rich Low_complexity Low_complexity 1 63 0 209 333 42 61 chr5 13746021 13746234 -185883916 + L2 LINE L2 2969 3177 -95 6675 92 13 13 chr5 13748160 13749538 -185880612 + L1PA10 LINE L1 4789 6166 -2 270 280 34 42 chr5 13749668 13749786 -185880364 + MLT1J LTR MaLR 358 474 -37 402 216 35 26 chr5 13749837 13749953 -185880197 + L2 LINE L2 3101 3217 -96 241 256 0 37 chr5 13750205 13750247 -185879903 + L2 LINE L2 3235 3274 -39 2446 168 26 16 chr5 13750247 13750676 -185879474 + Tigger2a DNA MER2_type 1 433 -1 241 256 0 37 chr5 13750676 13750715 -185879435 + L2 LINE L2 3274 3313 0 828 209 44 11 chr5 13751548 13751730 -185878420 + MER58A DNA MER1_type 37 224 0 882 276 107 31 chr5 13752378 13752986 -185877164 + MLT2F LTR ERVL 2 655 -8 1850 227 29 48 chr5 13753265 13753780 -185876370 + MLT1D LTR MaLR 1 505 0 768 265 70 90 chr5 13755444 13756075 -185874075 + HAL1 LINE L1 734 1351 -1156 450 229 251 16 chr5 13756154 13756337 -185873813 + HAL1 LINE L1 1557 1782 -725 233 238 99 50 chr5 13759729 13759830 -185870320 - MIR SINE MIR -22 240 135 23 0 0 0 chr5 13760324 13760347 -185869803 + AT_rich Low_complexity Low_complexity 1 23 0 2534 64 0 3 chr5 13761575 13761887 -185868263 - AluY SINE Alu 0 311 1 466 248 113 89 chr5 13761896 13762198 -185867952 + L2 LINE L2 3004 3312 -1 252 0 0 0 chr5 13762291 13762319 -185867831 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 2413 105 0 0 chr5 13763700 13764013 -185866137 - AluSq SINE Alu 0 313 1 743 67 0 0 chr5 13764340 13764459 -185865691 - AluSg/x SINE Alu 0 311 193 832 145 0 0 chr5 13764466 13764583 -185865567 - FLAM_C SINE Alu -16 117 1 201 164 16 33 chr5 13766088 13766149 -185864001 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 221 310 178 8 chr5 13766830 13766959 -185863191 + MIR SINE MIR 89 239 -23 3045 78 3 0 chr5 13767922 13768306 -185861844 + L1PA7 LINE L1 5770 6154 0 276 259 101 62 chr5 13768940 13769276 -185860874 + L1M4 LINE L1 4310 4658 -1488 366 228 26 35 chr5 13769775 13769889 -185860261 - L1ME LINE L1 -663 5499 5387 658 272 52 35 chr5 13769889 13770304 -185859846 + L1M4 LINE L1 4418 4836 -1310 2057 78 8 0 chr5 13770591 13770849 -185859301 + AluY SINE Alu 43 302 -9 1853 148 30 3 chr5 13771036 13771333 -185858817 + AluSx SINE Alu 5 309 -3 287 277 12 0 chr5 13771909 13771992 -185858158 + MER69 DNA AcHobo 2434 2517 -9 292 349 137 11 chr5 13772301 13772476 -185857674 - L2 LINE L2 -678 2636 2440 31 0 0 0 chr5 13772818 13772849 -185857301 + AT_rich Low_complexity Low_complexity 1 31 0 268 230 11 23 chr5 13774718 13774805 -185855345 + (TA)n Simple_repeat Simple_repeat 1 86 0 437 288 86 56 chr5 13775451 13775684 -185854466 + L2 LINE L2 2670 2909 -405 489 317 18 23 chr5 13775774 13775995 -185854155 + L2 LINE L2 3075 3294 -19 1623 209 45 73 chr5 13777111 13777630 -185852520 + MLT1D LTR MaLR 2 567 0 296 264 76 69 chr5 13778618 13778762 -185851388 - MER70-int LTR ERVL -2933 2090 1946 425 120 43 0 chr5 13778894 13778986 -185851164 + CT-rich Low_complexity Low_complexity 3 98 0 1431 206 109 6 chr5 13780379 13780690 -185849460 + MLT1D LTR MaLR 1 343 -162 1741 176 7 0 chr5 13783436 13783725 -185846425 + AluJb SINE Alu 5 295 -17 606 276 190 41 chr5 13786554 13786667 -185843483 + L2 LINE L2 2788 2883 -430 1269 240 88 30 chr5 13786667 13787108 -185843042 + MLT1C LTR MaLR 1 467 0 606 276 190 41 chr5 13787108 13787328 -185842822 + L2 LINE L2 2883 3069 -244 2578 138 14 8 chr5 13787328 13787690 -185842460 - THE1B LTR MaLR 0 364 1 606 276 190 41 chr5 13787690 13787818 -185842332 + L2 LINE L2 3069 3313 0 518 223 0 25 chr5 13788207 13788328 -185841822 - MIR SINE MIR -122 140 23 2143 111 3 40 chr5 13788968 13789292 -185840858 + AluSx SINE Alu 1 312 0 1899 148 21 0 chr5 13789397 13789688 -185840462 - AluJo SINE Alu -15 297 1 929 193 6 11 chr5 13790269 13790445 -185839705 + AluJo SINE Alu 122 296 -16 258 32 0 0 chr5 13790551 13790582 -185839568 + (TG)n Simple_repeat Simple_repeat 2 32 0 363 193 0 0 chr5 13790582 13790665 -185839485 + (TA)n Simple_repeat Simple_repeat 2 84 0 186 133 0 0 chr5 13790708 13790738 -185839412 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 2898 16 0 0 chr5 13790974 13791287 -185838863 + L1PA2 LINE L1 5841 6153 -2 1452 148 135 13 chr5 13791856 13792159 -185837991 + THE1C LTR MaLR 1 340 -35 2599 138 4 13 chr5 13792160 13792602 -185837548 + THE1C-int LTR MaLR 5 523 -1128 2189 99 50 0 chr5 13793407 13793690 -185836460 + AluSc SINE Alu 1 297 -12 4139 256 68 30 chr5 13795871 13797363 -185832787 + L1MEc LINE L1 36 1583 -4813 2432 125 15 9 chr5 13797451 13797786 -185832364 - MER1B DNA MER1_type 0 337 1 2061 119 3 0 chr5 13798150 13798443 -185831707 - AluSx SINE Alu -18 294 1 442 335 62 5 chr5 13798903 13799127 -185831023 - MLT1J1 LTR MaLR -2 444 208 265 270 110 10 chr5 13803325 13803425 -185826725 + MIR SINE MIR 83 192 -70 552 182 40 40 chr5 13805973 13806121 -185824029 - L2 LINE L2 -8 3305 3158 1862 125 40 3 chr5 13806168 13806465 -185823685 - L1MB5 LINE L1 0 6174 5867 5351 166 25 28 chr5 13806487 13806543 -185823607 - L1MA7 LINE L1 -10 6281 6226 1261 168 58 13 chr5 13806543 13806769 -185823381 + MER46A DNA MER2_type 1 236 0 5351 166 25 28 chr5 13806769 13807044 -185823106 - L1MA7 LINE L1 -65 6226 5952 420 37 0 0 chr5 13807044 13807098 -185823052 + (TG)n Simple_repeat Simple_repeat 1 54 0 1873 146 4 7 chr5 13807098 13807378 -185822772 - AluSx SINE Alu -33 279 1 5351 166 25 28 chr5 13807378 13808402 -185821748 - L1MA7 LINE L1 -337 5954 4923 237 344 149 0 chr5 13808402 13808623 -185821527 - L2 LINE L2 -233 3080 2827 1574 287 120 15 chr5 13809987 13811037 -185819113 + L2 LINE L2 2142 3299 -14 225 341 0 12 chr5 13812106 13812188 -185817962 + L2 LINE L2 3191 3271 -1 1614 177 0 43 chr5 13816615 13816915 -185813235 - AluSx SINE Alu -25 287 1 267 203 0 0 chr5 13817169 13817233 -185812917 + C-rich Low_complexity Low_complexity 1 64 0 880 270 81 12 chr5 13817269 13817591 -185812559 - L1MCc LINE L1 -4603 2519 2176 719 283 38 47 chr5 13817587 13818256 -185811894 - L1MCc LINE L1 -4887 1536 1171 * 419 118 12 0 chr5 13818439 13818524 -185811626 + (TC)n Simple_repeat Simple_repeat 1 86 0 213 331 23 77 chr5 13819119 13819229 -185810921 + L2 LINE L2 3142 3246 -26 2459 55 0 7 chr5 13819229 13819537 -185810613 - AluY SINE Alu -5 306 1 213 331 23 77 chr5 13819537 13819556 -185810594 + L2 LINE L2 3246 3264 -8 184 200 0 0 chr5 13819826 13819861 -185810289 - MER5B DNA MER1_type -6 172 138 267 257 14 29 chr5 13819875 13819945 -185810205 + MER5B DNA MER1_type 110 178 0 21 0 0 0 chr5 13820020 13820041 -185810109 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 13820268 13820289 -185809861 + AT_rich Low_complexity Low_complexity 1 21 0 4598 105 35 70 chr5 13821457 13821833 -185808317 - MER4E LTR ERV1 0 779 391 2331 106 0 0 chr5 13821833 13822134 -185808016 + AluSc SINE Alu 1 301 -8 4598 105 35 70 chr5 13822134 13822565 -185807585 - MER4E LTR ERV1 -388 391 1 2029 239 89 15 chr5 13824309 13825183 -185804967 - Charlie2 DNA MER1_type -16 2846 1908 471 204 88 15 chr5 13825330 13825467 -185804683 - Charlie2 DNA MER1_type -2675 187 41 640 271 261 28 chr5 13826041 13826162 -185803988 - L2 LINE L2 0 3313 3221 2152 139 0 0 chr5 13826162 13826465 -185803685 + AluSq SINE Alu 1 303 -10 640 271 261 28 chr5 13826465 13827225 -185802925 - L2 LINE L2 -92 3221 2199 265 227 0 15 chr5 13828253 13828319 -185801831 + (TA)n Simple_repeat Simple_repeat 2 66 0 2472 119 5 24 chr5 13828606 13828977 -185801173 - THE1B LTR MaLR 0 364 1 11123 97 8 0 chr5 13828985 13830544 -185799606 - THE1B-int LTR MaLR -8 1572 2 2501 111 5 24 chr5 13830545 13830916 -185799234 - THE1B LTR MaLR 0 364 1 231 239 22 87 chr5 13831219 13831357 -185798793 + MER5A DNA MER1_type 59 187 -2 741 172 0 8 chr5 13831554 13831676 -185798474 + FLAM_A SINE Alu 1 121 -12 24 32 0 0 chr5 13831676 13831707 -185798443 + AT_rich Low_complexity Low_complexity 1 31 0 255 197 49 0 chr5 13832554 13832615 -185797535 - LTR48 LTR ERV1 -50 737 674 21 36 0 0 chr5 13833379 13833407 -185796743 + AT_rich Low_complexity Low_complexity 1 28 0 470 309 40 17 chr5 13833783 13833958 -185796192 + MIR SINE MIR 71 249 -13 814 232 222 3 chr5 13835428 13835792 -185794358 - MER110A LTR ERV1 0 468 48 21 57 0 0 chr5 13836279 13836314 -185793836 + AT_rich Low_complexity Low_complexity 1 35 0 2321 179 94 6 chr5 13837089 13837602 -185792548 - MER89 LTR ERV1 0 559 2 1014 215 9 18 chr5 13839093 13839312 -185790838 + MER20 DNA MER1_type 1 217 -2 262 0 26 26 chr5 13841307 13841346 -185788804 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr5 13841420 13841443 -185788707 + AT_rich Low_complexity Low_complexity 1 23 0 2120 181 60 18 chr5 13841653 13842100 -185788050 - MLT1C LTR MaLR 0 467 2 766 229 28 51 chr5 13842339 13842592 -185787558 + MLT1D LTR MaLR 1 247 -258 2171 174 36 7 chr5 13842604 13843017 -185787133 + MSTB1 LTR MaLR 8 432 0 442 248 141 27 chr5 13843065 13843214 -185786936 + MLT1C LTR MaLR 337 464 -3 186 43 0 0 chr5 13843606 13843629 -185786521 + (TA)n Simple_repeat Simple_repeat 1 23 0 313 157 31 164 chr5 13846150 13846309 -185783841 + MER103 DNA DNA 15 152 -14 1341 112 0 0 chr5 13847900 13848079 -185782071 - AluSg/x SINE Alu -5 307 129 2137 134 3 3 chr5 13848085 13848391 -185781759 - AluSx SINE Alu -6 306 1 279 79 0 0 chr5 13849061 13849099 -185781051 + (CTTG)n Simple_repeat Simple_repeat 2 39 0 2084 148 3 26 chr5 13849634 13849979 -185780171 - MER1B DNA MER1_type 0 337 1 1499 130 126 15 chr5 13851482 13851743 -185778407 + AluSg1 SINE Alu 1 290 -19 1742 209 41 53 chr5 13852540 13853047 -185777103 + MLT1D LTR MaLR 1 501 -4 2225 8 0 0 chr5 13853047 13853295 -185776855 + L1PA3 LINE L1 5904 6151 -4 240 35 0 0 chr5 13854315 13854344 -185775806 + (TTG)n Simple_repeat Simple_repeat 1 29 0 2042 117 0 4 chr5 13854348 13854622 -185775528 - AluSg SINE Alu -37 273 1 1381 235 201 4 chr5 13855044 13855507 -185774643 - L1MD2 LINE L1 -13 6346 5793 11422 160 42 26 chr5 13855988 13856074 -185774076 + L1M4c LINE L1 17 100 -6284 1924 220 30 65 chr5 13856074 13856646 -185773504 - MLT2B3 LTR ERVL -2 552 1 11422 160 42 26 chr5 13856646 13859005 -185771145 + L1M4c LINE L1 100 2500 -3884 2073 168 58 32 chr5 13859008 13859164 -185770986 + L1MB2 LINE L1 5658 5808 -363 1819 172 3 3 chr5 13859164 13859460 -185770690 + AluSx SINE Alu 3 298 -14 2073 168 58 32 chr5 13859460 13859802 -185770348 + L1MB2 LINE L1 5808 6169 -2 204 40 0 0 chr5 13860543 13860568 -185769582 + (CA)n Simple_repeat Simple_repeat 2 26 0 795 93 0 9 chr5 13860864 13860971 -185769179 - U6 snRNA snRNA -1 106 1 2185 129 10 0 chr5 13861514 13861823 -185768327 + AluSx SINE Alu 1 312 0 474 247 65 49 chr5 13864799 13864991 -185765159 - MIR SINE MIR 0 262 62 181 257 64 73 chr5 13865822 13865931 -185764219 + MIR SINE MIR 21 128 -134 215 178 22 0 chr5 13867896 13867941 -185762209 + (TA)n Simple_repeat Simple_repeat 1 46 0 574 172 0 0 chr5 13868958 13869051 -185761099 - Tigger1 DNA MER2_type 0 2418 2326 * 4707 136 14 8 chr5 13869048 13869164 -185760986 - Tigger1 DNA MER2_type -1548 870 756 2427 77 7 0 chr5 13869164 13869463 -185760687 + AluSg SINE Alu 1 301 -9 4707 136 14 8 chr5 13869463 13870069 -185760081 - Tigger1 DNA MER2_type -1662 756 144 320 314 0 0 chr5 13870526 13870628 -185759522 + L1MC4 LINE L1 6593 6694 -1348 2047 114 3 23 chr5 13871094 13871393 -185758757 + AluSx SINE Alu 1 293 -19 1100 173 117 5 chr5 13871946 13872160 -185757990 + MER8 DNA MER2_type 2 239 0 416 337 103 16 chr5 13874435 13874687 -185755463 - L3 LINE CR1 -98 1479 1206 965 187 79 128 chr5 13874690 13875196 -185754954 - MER39 LTR ERV1 0 707 1 410 383 17 0 chr5 13875205 13875435 -185754715 - L3 LINE CR1 -394 1183 950 252 224 13 26 chr5 13875467 13875543 -185754607 + MIR SINE MIR 50 124 -138 198 0 0 0 chr5 13876167 13876189 -185753961 + (CAT)n Simple_repeat Simple_repeat 2 23 0 2245 118 0 10 chr5 13876654 13876967 -185753183 + AluSx SINE Alu 1 310 -2 572 227 68 0 chr5 13879066 13879229 -185750921 - MER69A DNA AcHobo -3 174 1 1609 187 17 43 chr5 13879658 13880005 -185750145 - MLT1D LTR MaLR -166 339 2 246 299 13 39 chr5 13880138 13880215 -185749935 - MLT1J LTR MaLR -234 277 203 21 36 0 0 chr5 13881183 13881211 -185748939 + AT_rich Low_complexity Low_complexity 1 28 0 362 245 44 57 chr5 13881591 13881750 -185748400 - MLT1J2 LTR MaLR -26 424 268 311 248 47 54 chr5 13881766 13881895 -185748255 - MLT1J1 LTR MaLR -280 166 39 748 52 21 0 chr5 13882197 13882293 -185747857 - L1PA7 LINE L1 -1 6153 6056 637 310 135 34 chr5 13882296 13882979 -185747171 + L2 LINE L2 2196 2947 -367 2170 108 19 32 chr5 13883374 13883689 -185746461 - AluSp SINE Alu -2 311 1 228 286 176 8 chr5 13886654 13886773 -185743377 - L2 LINE L2 -2 3270 3132 499 208 20 67 chr5 13887231 13887380 -185742770 + MER5B DNA MER1_type 1 142 -36 2333 95 0 0 chr5 13887636 13887930 -185742220 - AluSg SINE Alu -16 294 1 1615 158 66 39 chr5 13889205 13889540 -185740610 + MER2 DNA MER2_type 1 344 0 2449 84 0 0 chr5 13890562 13890859 -185739291 - AluSc SINE Alu -12 297 1 185 277 79 98 chr5 13891087 13891274 -185738876 + L2 LINE L2 109 298 -3016 2289 116 0 0 chr5 13891274 13891575 -185738575 + AluSc SINE Alu 1 301 -8 185 277 79 98 chr5 13891575 13891817 -185738333 + L2 LINE L2 298 530 -2784 1187 280 135 56 chr5 13891980 13893350 -185736800 + L2 LINE L2 1132 2609 -705 261 206 0 63 chr5 13893687 13893876 -185736274 + C-rich Low_complexity Low_complexity 2 178 0 289 203 236 32 chr5 13894572 13894695 -185735455 + HAL1 LINE L1 2360 2507 0 367 176 10 88 chr5 13894710 13894812 -185735338 + L1ME4a LINE L1 5966 6059 -62 2151 107 0 0 chr5 13895953 13896264 -185733886 + AluSx SINE Alu 1 312 0 203 308 19 67 chr5 13898134 13898238 -185731912 - MER5B DNA MER1_type -75 103 5 205 333 104 9 chr5 13898718 13898835 -185731315 - MER5A DNA MER1_type -51 138 1 236 157 39 20 chr5 13899532 13899583 -185730567 + GA-rich Low_complexity Low_complexity 5 56 0 376 108 18 63 chr5 13900444 13900555 -185729595 + (GGGGA)n Simple_repeat Simple_repeat 2 107 0 234 156 0 0 chr5 13902206 13902251 -185727899 + (TGG)n Simple_repeat Simple_repeat 1 45 0 2220 106 0 0 chr5 13903047 13903379 -185726771 - AluSx SINE Alu 0 332 1 227 249 50 138 chr5 13903858 13904119 -185726031 - L2 LINE L2 0 3313 3076 296 311 95 48 chr5 13904158 13904537 -185725613 - L2 LINE L2 -337 2977 2581 3786 145 22 16 chr5 13904876 13905559 -185724591 - L1MA4 LINE L1 -8 6292 5606 240 59 0 0 chr5 13906550 13906584 -185723566 + (TG)n Simple_repeat Simple_repeat 2 35 0 273 242 0 105 chr5 13906915 13907010 -185723140 + MER5A DNA MER1_type 9 93 -96 224 30 30 0 chr5 13907100 13907133 -185723017 + (TTA)n Simple_repeat Simple_repeat 3 36 0 6892 54 11 0 chr5 13907133 13908470 -185721680 - L1PA7 LINE L1 -18 6136 4788 2007 159 0 0 chr5 13910418 13910713 -185719437 + AluJb SINE Alu 1 295 -17 1152 176 5 0 chr5 13911083 13911271 -185718879 - MER5A DNA MER1_type 0 189 1 430 259 23 30 chr5 13912580 13912711 -185717439 + MIR SINE MIR 15 144 -118 213 94 0 0 chr5 13912723 13912755 -185717395 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 821 153 0 21 chr5 13913660 13913804 -185716346 + L1MB4 LINE L1 5666 5806 -374 325 204 126 68 chr5 13913796 13913899 -185716251 - L1PB4 LINE L1 -3 6153 6045 * 1747 168 55 26 chr5 13913899 13914281 -185715869 + L1MB4 LINE L1 5787 6179 -1 201 129 0 0 chr5 13915735 13915766 -185714384 + (TG)n Simple_repeat Simple_repeat 2 32 0 210 133 67 22 chr5 13917079 13917169 -185712981 + (TAGA)n Simple_repeat Simple_repeat 3 96 0 495 295 78 0 chr5 13918547 13918764 -185711386 + MER46C DNA MER2_type 84 317 -21 954 217 14 27 chr5 13919567 13919788 -185710362 - MER20 DNA MER1_type 0 219 2 747 203 0 0 chr5 13920112 13920225 -185709925 + FLAM_A SINE Alu 3 118 -184 241 111 0 0 chr5 13920225 13920261 -185709889 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 735 234 86 11 chr5 13920368 13920543 -185709607 - MER5A DNA MER1_type -1 188 1 459 205 0 0 chr5 13920598 13920681 -185709469 + MER5A DNA MER1_type 9 91 -98 2368 79 7 0 chr5 13921948 13922240 -185707910 + AluSp SINE Alu 1 294 -19 625 277 149 74 chr5 13923003 13923555 -185706595 - MLT1G1 LTR MaLR -2 593 1 268 253 69 0 chr5 13923770 13923857 -185706293 + MLT1L LTR MaLR 368 460 -155 2490 141 171 44 chr5 13925200 13925591 -185704559 - LTR18B LTR ERVL 0 614 133 2195 108 0 10 chr5 13925591 13925886 -185704264 + AluSq SINE Alu 1 292 -21 2490 141 171 44 chr5 13925886 13926039 -185704111 - LTR18B LTR ERVL -481 133 1 2300 107 13 0 chr5 13926142 13926442 -185703708 - AluSp SINE Alu -9 304 1 439 179 143 9 chr5 13926450 13926562 -185703588 - MER53 DNA DNA -62 127 1 26 30 0 0 chr5 13926693 13926726 -185703424 + AT_rich Low_complexity Low_complexity 1 33 0 180 295 32 42 chr5 13926763 13926858 -185703292 + MIR SINE MIR 89 182 -80 1904 203 47 19 chr5 13926884 13927308 -185702842 + MER63B DNA MER1_type 1 436 0 4981 165 25 27 chr5 13927384 13927742 -185702408 - L1MB1 LINE L1 -9 6159 5802 849 195 87 0 chr5 13927742 13927891 -185702259 - FAM SINE Alu -12 163 2 4981 165 25 27 chr5 13927891 13928087 -185702063 - L1MB1 LINE L1 -366 5802 5607 2404 110 48 28 chr5 13928087 13928442 -185701708 - THE1B LTR MaLR 0 364 3 4981 165 25 27 chr5 13928442 13929354 -185700796 - L1MB1 LINE L1 -561 5607 4697 647 165 0 0 chr5 13929358 13929473 -185700677 + L1MB1 LINE L1 4567 4681 -1465 1893 192 149 11 chr5 13930179 13930622 -185699528 - MLT1D LTR MaLR -1 504 1 2167 99 7 0 chr5 13930688 13930972 -185699178 - AluSq SINE Alu -2 311 26 1996 189 16 13 chr5 13931456 13931832 -185698318 + MLT1B LTR MaLR 1 377 -13 478 210 94 22 chr5 13932330 13932468 -185697682 + MLT1C LTR MaLR 6 153 -314 429 266 76 13 chr5 13932541 13932699 -185697451 + LTR52 LTR ERVL 254 421 0 363 284 113 7 chr5 13933551 13933692 -185696458 - MLT1K LTR MaLR -57 531 376 457 253 79 42 chr5 13933868 13934058 -185696092 - MIR SINE MIR -7 255 59 260 323 169 10 chr5 13934074 13934275 -185695875 - L3 LINE CR1 -2 1575 1343 414 248 23 38 chr5 13934276 13934409 -185695741 - L3 LINE CR1 -546 1031 901 4065 88 13 2 chr5 13934847 13935379 -185694771 - L1PB1 LINE L1 -4 6147 5610 2136 176 16 11 chr5 13935429 13935792 -185694358 - MLT1A1 LTR MaLR 0 365 1 459 267 17 17 chr5 13935792 13935908 -185694242 + MIR3 SINE MIR 66 181 -27 2287 150 109 10 chr5 13937298 13937691 -185692459 + MSTB1 LTR MaLR 1 432 0 302 272 67 67 chr5 13937706 13937901 -185692249 - LTR67 LTR ERVL -293 264 70 412 277 86 15 chr5 13938146 13938449 -185691701 + L1MEc LINE L1 49 396 -6000 1485 190 95 15 chr5 13938449 13938786 -185691364 + MLT1A1 LTR MaLR 2 365 0 412 277 86 15 chr5 13938786 13938805 -185691345 + L1MEc LINE L1 396 412 -5984 603 312 51 38 chr5 13939386 13939623 -185690527 + MLT1K LTR MaLR 7 246 -342 326 271 135 29 chr5 13939701 13939871 -185690279 + MLT1K LTR MaLR 375 562 -26 1981 144 0 10 chr5 13940641 13940933 -185689217 - AluSx SINE Alu -19 293 5 1871 240 45 0 chr5 13941815 13942286 -185687864 + MLT1D LTR MaLR 7 498 -7 2549 129 22 0 chr5 13943730 13944086 -185686064 + THE1B LTR MaLR 1 364 0 182 337 22 45 chr5 13944221 13944310 -185685840 + L2 LINE L2 3168 3254 -18 200 215 32 21 chr5 13945502 13945595 -185684555 + GA-rich Low_complexity Low_complexity 3 96 0 5381 145 7 61 chr5 13945605 13945621 -185684529 - MER49 LTR ERV1 -3 920 905 2413 44 3 7 chr5 13945621 13945915 -185684235 + AluY SINE Alu 1 293 -18 5381 145 7 61 chr5 13945915 13946756 -185683394 - MER49 LTR ERV1 -18 905 118 5457 53 5 2 chr5 13946756 13947397 -185682753 - L1PA8 LINE L1 -4 6168 5526 5381 145 7 61 chr5 13947397 13947510 -185682640 - MER49 LTR ERV1 -805 118 1 2462 67 0 0 chr5 13948820 13949119 -185681031 + AluY SINE Alu 1 299 -12 452 298 93 27 chr5 13949456 13949681 -185680469 + MIR SINE MIR 10 249 -13 263 295 54 27 chr5 13949763 13949912 -185680238 - L1ME2 LINE L1 -5 6161 6009 393 274 47 0 chr5 13950322 13950428 -185679722 + L2 LINE L2 3203 3313 0 2126 112 0 25 chr5 13951201 13951515 -185678635 - AluSx SINE Alu -4 308 3 182 222 28 0 chr5 13951518 13951554 -185678596 - L3b LINE CR1 -108 1475 1439 28 0 0 0 chr5 13952145 13952173 -185677977 + AT_rich Low_complexity Low_complexity 1 28 0 180 354 0 0 chr5 13954485 13954533 -185675617 + L2 LINE L2 3221 3268 -4 482 298 137 0 chr5 13955747 13955908 -185674242 + MER5A DNA MER1_type 4 186 -3 203 310 14 0 chr5 13956053 13956124 -185674026 + GA-rich Low_complexity Low_complexity 4 75 0 1150 141 0 0 chr5 13956448 13956618 -185673532 + LTR45B LTR ERV1 1 170 -319 4384 74 7 0 chr5 13956624 13957177 -185672973 - HERVL LTR ERVL -1080 4574 4018 524 234 30 85 chr5 13957518 13957719 -185672431 + MLT1C LTR MaLR 3 192 -275 262 224 41 61 chr5 13957943 13958041 -185672109 + L1MEd LINE L1 373 468 -5737 906 296 85 44 chr5 13958209 13959048 -185671102 + L1MEd LINE L1 791 1663 -4733 28 0 0 0 chr5 13959120 13959148 -185671002 + AT_rich Low_complexity Low_complexity 1 28 0 1629 278 88 14 chr5 13959509 13960237 -185669913 + L1MEd LINE L1 2179 2960 -3255 7566 55 6 1 chr5 13960781 13962425 -185667725 - L1PA6 LINE L1 -1 6153 4504 2005 137 0 0 chr5 13962428 13962735 -185667415 - L1P3 LINE L1 -4804 1657 1351 327 243 107 14 chr5 13962832 13962972 -185667178 + L3 LINE CR1 1220 1372 -205 257 259 133 30 chr5 13964063 13964198 -185665952 + L3 LINE CR1 1376 1524 -53 641 143 20 10 chr5 13964695 13964793 -185665357 - AluJb SINE Alu -19 293 195 2089 101 11 4 chr5 13965668 13965945 -185664205 - AluSq SINE Alu -34 279 1 688 233 34 45 chr5 13966050 13966226 -185663924 - MER5B DNA MER1_type -3 175 2 1629 152 99 9 chr5 13969344 13969667 -185660483 + L1MA8 LINE L1 5935 6286 -5 415 13 13 53 chr5 13970318 13970394 -185659756 + (TTTTA)n Simple_repeat Simple_repeat 2 74 0 2435 59 0 0 chr5 13970397 13970684 -185659466 - AluY SINE Alu -24 287 1 205 235 39 0 chr5 13970763 13970814 -185659336 + L2 LINE L2 3261 3313 0 350 303 99 7 chr5 13972490 13972632 -185657518 + MIR SINE MIR 38 192 -70 256 220 0 0 chr5 13973457 13973507 -185656643 - MER4-int LTR ERV1 -5438 1160 1111 352 205 9 18 chr5 13973510 13973622 -185656528 + (CATA)n Simple_repeat Simple_repeat 1 111 0 886 123 11 22 chr5 13974664 13974843 -185655307 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 198 303 0 0 chr5 13974833 13974922 -185655228 + T-rich Low_complexity Low_complexity 1 89 0 * 1975 168 48 0 chr5 13974926 13975277 -185654873 - L1MB2 LINE L1 -2 6169 5802 505 160 160 0 chr5 13975529 13975629 -185654521 + MLT1A1 LTR MaLR 172 287 -78 189 310 0 0 chr5 13976062 13976120 -185654030 - MER5B DNA MER1_type -85 93 36 1088 262 149 19 chr5 13976186 13976717 -185653433 + L2 LINE L2 1512 2111 -1203 592 288 211 3 chr5 13976714 13977065 -185653085 + L2 LINE L2 2868 3291 -22 * 379 309 208 10 chr5 13977593 13977800 -185652350 - MIR SINE MIR -1 261 14 394 212 50 10 chr5 13977831 13977930 -185652220 - L1MB2 LINE L1 -460 5661 5559 325 279 122 34 chr5 13977936 13978083 -185652067 - L1MB2 LINE L1 -681 5497 5338 30 27 0 0 chr5 13978273 13978310 -185651840 + AT_rich Low_complexity Low_complexity 1 37 0 813 164 0 15 chr5 13978494 13978628 -185651522 - FLAM_A SINE Alu 0 133 2 267 316 46 17 chr5 13979274 13979448 -185650702 + L1ME3A LINE L1 5744 5922 -248 1520 151 52 66 chr5 13979505 13979715 -185650435 - AluJo SINE Alu -11 301 95 2375 133 30 25 chr5 13979715 13980077 -185650073 - THE1B LTR MaLR 0 364 1 1520 151 52 66 chr5 13980077 13980171 -185649979 - AluJo SINE Alu -217 95 1 236 287 50 30 chr5 13980233 13980334 -185649816 + L1ME3A LINE L1 5980 6082 -88 281 300 49 38 chr5 13980338 13980605 -185649545 - L1MB2 LINE L1 -1767 4379 4110 405 272 112 42 chr5 13980791 13981175 -185648975 - L1MB2 LINE L1 -2166 3980 3566 192 77 0 0 chr5 13982529 13982555 -185647595 + (TTAAA)n Simple_repeat Simple_repeat 5 30 0 22 0 0 0 chr5 13982583 13982605 -185647545 + AT_rich Low_complexity Low_complexity 1 22 0 261 309 73 44 chr5 13982953 13983089 -185647061 + L2 LINE L2 3169 3308 -5 276 338 114 27 chr5 13983185 13983404 -185646746 - L3 LINE CR1 -81 1496 1259 328 283 43 0 chr5 13983421 13983513 -185646637 - MIR SINE MIR -108 154 59 202 350 67 17 chr5 13983544 13983664 -185646486 + L2 LINE L2 3147 3272 0 21 57 0 0 chr5 13986430 13986465 -185643685 + AT_rich Low_complexity Low_complexity 1 35 0 1502 160 81 138 chr5 13986497 13986990 -185643160 - MER4C LTR ERV1 0 465 1 239 217 0 0 chr5 13987856 13987902 -185642248 + L2 LINE L2 2609 2654 -660 475 302 157 15 chr5 13987934 13988202 -185641948 + L2 LINE L2 3005 3310 -3 296 347 92 34 chr5 13988634 13988896 -185641254 + L2 LINE L2 2994 3270 -2 1677 179 100 39 chr5 13989706 13990115 -185640035 + Tigger2a DNA MER2_type 1 434 0 1889 108 7 54 chr5 13990733 13990887 -185639263 + MLT2A2 LTR ERVL 1 136 -317 2010 134 28 0 chr5 13990887 13991178 -185638972 - AluSx SINE Alu -13 299 1 1889 108 7 54 chr5 13991178 13991320 -185638830 + MLT2A2 LTR ERVL 136 283 -170 377 234 52 73 chr5 13991988 13992180 -185637970 - L2 LINE L2 0 3313 3126 2120 117 0 41 chr5 13992794 13993111 -185637039 + AluSg SINE Alu 1 304 -6 909 108 23 0 chr5 13993115 13993245 -185636905 + AluSq/x SINE Alu 1 133 -180 479 311 68 0 chr5 13993250 13993411 -185636739 - MIR SINE MIR -56 206 35 207 0 0 0 chr5 13993990 13994013 -185636137 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 199 361 28 49 chr5 13995075 13995219 -185634931 + MER5A DNA MER1_type 20 160 -29 * 211 346 39 29 chr5 13995143 13995247 -185634903 - MER5B DNA MER1_type -73 105 1 541 157 17 0 chr5 13996122 13996237 -185633913 + (TA)n Simple_repeat Simple_repeat 1 117 0 21 0 0 0 chr5 13996385 13996406 -185633744 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr5 13996472 13996495 -185633655 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1994 184 28 31 chr5 13996763 13997154 -185632996 - MLT1B LTR MaLR 0 390 1 2330 86 7 0 chr5 13997683 13997973 -185632177 - AluSc SINE Alu -17 292 1 180 200 12 129 chr5 13998216 13998301 -185631849 + L2 LINE L2 3133 3207 -65 471 221 68 55 chr5 13998880 13998998 -185631152 + L1ME3A LINE L1 5998 6120 -50 2523 121 11 35 chr5 13998998 13999371 -185630779 + THE1B LTR MaLR 1 364 0 471 221 68 55 chr5 13999371 13999415 -185630735 + L1ME3A LINE L1 6120 6162 -8 1655 202 144 7 chr5 13999685 14000121 -185630029 + LTR54B LTR ERV1 1 496 -2 345 351 82 10 chr5 14000341 14000549 -185629601 + MIR SINE MIR 32 254 -8 328 247 286 0 chr5 14000652 14000806 -185629344 + MIR SINE MIR 50 247 -15 491 196 20 72 chr5 14000949 14001045 -185629105 - L1MDa LINE L1 -3662 2878 2791 2536 118 28 6 chr5 14001045 14001401 -185628749 + THE1B LTR MaLR 1 364 0 491 196 20 72 chr5 14001401 14001457 -185628693 - L1MDa LINE L1 -3749 2791 2734 469 188 46 151 chr5 14001488 14001706 -185628444 + MIR SINE MIR 58 252 -10 207 100 0 0 chr5 14001976 14002006 -185628144 + (A)n Simple_repeat Simple_repeat 1 30 0 2103 101 7 0 chr5 14002533 14002809 -185627341 - AluSq SINE Alu -32 281 4 305 279 54 0 chr5 14003552 14003681 -185626469 - L1MDa LINE L1 -4100 2440 2305 3601 41 4 82 chr5 14003684 14004170 -185625980 - L1PA7 LINE L1 0 6154 5707 1027 239 56 54 chr5 14004337 14004837 -185625313 - L1MEc LINE L1 -3669 2546 2100 1744 76 0 5 chr5 14005135 14005359 -185624791 - AluSp SINE Alu -6 307 85 494 237 58 64 chr5 14005572 14005745 -185624405 + MER5B DNA MER1_type 4 175 -3 787 191 125 0 chr5 14005922 14006090 -185624060 + MER20 DNA MER1_type 31 219 0 3182 131 50 27 chr5 14007589 14008175 -185621975 - L1MA8 LINE L1 -3 6288 5690 183 218 0 0 chr5 14008478 14008533 -185621617 + (TGAA)n Simple_repeat Simple_repeat 4 58 0 326 326 90 31 chr5 14009267 14009357 -185620793 + MIR SINE MIR 1 84 -178 1760 179 127 21 chr5 14009357 14009775 -185620375 - MER31B LTR ERV1 0 466 5 326 326 90 31 chr5 14009775 14009920 -185620230 + MIR SINE MIR 84 249 -13 356 243 171 7 chr5 14010107 14010247 -185619903 + MER110A LTR ERV1 8 170 -298 388 270 55 98 chr5 14010344 14010585 -185619565 + MER110 LTR ERV1 194 421 -70 2508 199 26 59 chr5 14010585 14011157 -185618993 + MLT2B3 LTR ERVL 2 554 0 388 270 55 98 chr5 14011157 14011222 -185618928 + MER110 LTR ERV1 421 487 -4 2174 256 56 21 chr5 14013597 14014014 -185616136 + L1ME LINE L1 4796 5197 -967 1994 179 19 16 chr5 14014014 14014378 -185615772 - MLT1A1 LTR MaLR 0 365 1 2174 256 56 21 chr5 14014378 14014941 -185615209 + L1ME LINE L1 5197 5816 -348 244 291 45 62 chr5 14014936 14015115 -185615035 + L1MC/D LINE L1 5654 5829 -1979 * 283 289 12 0 chr5 14015279 14015362 -185614788 + MER81 DNA DNA 2 85 -29 1690 120 0 0 chr5 14015516 14015750 -185614400 - AluSx SINE Alu -16 296 63 212 375 10 0 chr5 14015855 14015959 -185614191 + L2 LINE L2 3207 3311 -2 2675 119 5 13 chr5 14016730 14017108 -185613042 + THE1C LTR MaLR 1 375 0 529 284 52 16 chr5 14017728 14018112 -185612038 + MLT1G1 LTR MaLR 158 549 0 240 135 216 0 chr5 14018206 14018280 -185611870 - L1MB7 LINE L1 -5 6179 6090 2104 185 15 10 chr5 14018283 14018383 -185611767 - L1MB7 LINE L1 -193 5985 5886 847 266 80 11 chr5 14018383 14018788 -185611362 - L1PB4 LINE L1 -272 5884 5447 30 27 0 0 chr5 14018857 14018894 -185611256 + AT_rich Low_complexity Low_complexity 1 37 0 408 40 0 0 chr5 14019710 14019760 -185610390 + (TG)n Simple_repeat Simple_repeat 2 51 0 265 342 171 0 chr5 14019760 14019912 -185610238 + L3 LINE CR1 1391 1568 -9 2429 120 25 33 chr5 14021671 14021997 -185608153 + THE1B LTR MaLR 1 325 -39 2026 114 13 17 chr5 14021997 14022296 -185607854 - AluSx SINE Alu -14 298 1 2429 120 25 33 chr5 14022296 14022336 -185607814 + THE1B LTR MaLR 325 364 0 2175 121 3 3 chr5 14022420 14022727 -185607423 + AluSx SINE Alu 1 307 -5 1023 167 0 0 chr5 14022728 14022884 -185607266 + AluSg/x SINE Alu 127 327 0 364 44 0 0 chr5 14022884 14022929 -185607221 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 24 32 0 0 chr5 14023267 14023298 -185606852 + AT_rich Low_complexity Low_complexity 1 31 0 296 365 24 8 chr5 14024234 14024360 -185605790 + L3 LINE CR1 366 493 -1084 2391 73 0 22 chr5 14024651 14024964 -185605186 - AluY SINE Alu -5 306 1 255 332 70 2 chr5 14024969 14025140 -185605010 - MIR SINE MIR -62 146 5 2252 114 0 16 chr5 14025982 14026290 -185603860 - AluSg SINE Alu -7 303 1 21 0 0 0 chr5 14026915 14026936 -185603214 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 14027007 14027055 -185603095 + AT_rich Low_complexity Low_complexity 1 48 0 417 340 70 0 chr5 14027627 14027812 -185602338 - MIR SINE MIR 0 262 65 507 257 72 0 chr5 14027903 14028055 -185602095 + MIR SINE MIR 100 262 0 21 0 0 0 chr5 14028190 14028211 -185601939 + AT_rich Low_complexity Low_complexity 1 21 0 2103 110 34 3 chr5 14028231 14028522 -185601628 + AluSx SINE Alu 1 300 -12 2228 107 7 7 chr5 14029018 14029327 -185600823 - AluSc SINE Alu 0 309 1 24 0 0 0 chr5 14029560 14029584 -185600566 + AT_rich Low_complexity Low_complexity 1 24 0 884 200 85 0 chr5 14030593 14030828 -185599322 + L1ME1 LINE L1 5822 6076 -90 23 54 0 0 chr5 14031272 14031309 -185598841 + AT_rich Low_complexity Low_complexity 1 37 0 1035 174 0 0 chr5 14031375 14031536 -185598614 + AluJb SINE Alu 135 295 -17 2461 53 3 3 chr5 14032483 14032783 -185597367 - AluY SINE Alu -11 300 1 887 282 60 0 chr5 14032826 14033159 -185596991 + L1ME1 LINE L1 5809 6161 -5 1423 246 35 71 chr5 14033301 14033821 -185596329 - MLT1E LTR MaLR -46 547 47 312 328 84 0 chr5 14034033 14034164 -185595986 - L1ME4a LINE L1 -96 6025 5884 268 340 40 10 chr5 14036029 14036129 -185594021 + L2 LINE L2 3154 3256 -16 318 231 13 0 chr5 14037788 14037866 -185592284 + MLT1I LTR MaLR 329 407 -2 22 70 0 0 chr5 14037909 14037952 -185592198 + AT_rich Low_complexity Low_complexity 1 43 0 1722 164 10 16 chr5 14039285 14039595 -185590555 - AluSx SINE Alu -4 308 1 218 31 0 31 chr5 14040660 14040692 -185589458 + (TA)n Simple_repeat Simple_repeat 1 31 0 29 78 0 0 chr5 14040790 14040854 -185589296 + AT_rich Low_complexity Low_complexity 1 64 0 2342 91 0 0 chr5 14041115 14041413 -185588737 + AluSg SINE Alu 1 298 -12 337 264 221 24 chr5 14041545 14041753 -185588397 + L2 LINE L2 2563 2811 -503 207 281 16 16 chr5 14041841 14041905 -185588245 + L2 LINE L2 2997 3060 -253 496 301 87 18 chr5 14041954 14042173 -185587977 + MIR SINE MIR 8 241 -21 333 230 90 50 chr5 14042284 14042384 -185587766 + L2 LINE L2 3169 3272 0 1336 226 27 6 chr5 14043292 14043620 -185586530 + MER58B DNA MER1_type 2 336 -5 359 248 66 22 chr5 14043765 14043902 -185586248 + L1ME4a LINE L1 5823 5965 -156 2076 245 2 27 chr5 14044499 14044628 -185585522 - MER82 DNA MER2_type -140 513 382 2454 49 26 10 chr5 14044628 14044934 -185585216 - AluY SINE Alu 0 311 1 2076 245 2 27 chr5 14044934 14045327 -185584823 - MER82 DNA MER2_type -271 382 4 316 231 185 9 chr5 14045393 14045501 -185584649 - L2 LINE L2 -1 3312 3186 * 350 322 151 5 chr5 14045498 14045596 -185584554 - MIR SINE MIR -10 252 170 208 50 0 50 chr5 14045596 14045636 -185584514 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 350 322 151 5 chr5 14045636 14045736 -185584414 - MIR SINE MIR -92 170 25 921 251 0 0 chr5 14045741 14045944 -185584206 - MLT1A1 LTR MaLR -7 358 156 1822 123 4 14 chr5 14046271 14046548 -185583602 + AluSq SINE Alu 28 301 -12 1218 203 66 11 chr5 14047247 14047518 -185582632 - AluJo SINE Alu -16 296 11 28 48 0 0 chr5 14047539 14047581 -185582569 + AT_rich Low_complexity Low_complexity 1 42 0 2322 78 0 3 chr5 14047723 14048060 -185582090 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 14048301 14048322 -185581828 + AT_rich Low_complexity Low_complexity 1 21 0 2501 18 0 11 chr5 14048377 14048660 -185581490 - AluYb8 SINE Alu 0 318 39 190 303 66 13 chr5 14049838 14049914 -185580236 - MIR SINE MIR -71 191 112 223 219 87 0 chr5 14050332 14050408 -185579742 + MIR3 SINE MIR 99 159 -49 903 306 84 19 chr5 14050871 14051331 -185578819 + L2 LINE L2 2752 3253 -60 219 385 32 37 chr5 14051363 14051581 -185578569 - MIR SINE MIR -30 232 16 478 312 64 64 chr5 14051621 14051951 -185578199 - L2 LINE L2 -436 2878 2549 353 131 35 35 chr5 14052106 14052251 -185577899 + (TA)n Simple_repeat Simple_repeat 1 145 0 1942 163 0 3 chr5 14052775 14053082 -185577068 - AluJb SINE Alu -6 306 1 209 236 101 22 chr5 14053172 14053261 -185576889 + MIR SINE MIR 112 207 -55 2480 71 3 3 chr5 14054788 14055098 -185575052 + AluY SINE Alu 1 310 -1 265 260 39 0 chr5 14055233 14055310 -185574840 - MIR3 SINE MIR -11 197 118 318 339 110 44 chr5 14057896 14058647 -185571503 + L2 LINE L2 1935 2780 -492 686 158 24 134 chr5 14058647 14058893 -185571257 - MER20 DNA MER1_type 0 219 1 318 339 110 44 chr5 14058893 14059210 -185570940 + L2 LINE L2 2780 3075 -197 235 276 17 0 chr5 14059840 14059898 -185570252 + L2 LINE L2 3210 3268 -4 251 288 42 8 chr5 14060002 14060120 -185570030 + MLT1K LTR MaLR 138 259 -329 234 0 0 0 chr5 14110485 14110511 -185519639 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 221 318 0 0 chr5 14110561 14110624 -185519526 - MIR SINE MIR -162 100 38 230 245 128 43 chr5 14110868 14110962 -185519188 + MIR3 SINE MIR 10 111 -97 252 162 147 0 chr5 14111339 14111407 -185518743 + L1MB4 LINE L1 5284 5361 -813 2048 155 51 0 chr5 14111407 14111761 -185518389 + MSTC LTR MaLR 1 372 -56 2638 187 24 2 chr5 14111861 14112395 -185517755 + L1MB4 LINE L1 5634 6179 -1 873 222 44 0 chr5 14112816 14113019 -185517131 + MER20 DNA MER1_type 1 212 -7 1139 236 82 20 chr5 14113552 14113904 -185516246 + MLT1A2 LTR MaLR 1 374 0 530 282 0 0 chr5 14113972 14114096 -185516054 + MIR SINE MIR 97 220 -42 6274 57 37 2 chr5 14114553 14115419 -185514731 - L1PA7 LINE L1 -1 6153 5258 2210 106 25 6 chr5 14115421 14115779 -185514371 + L1PA7 LINE L1 4915 5279 -867 2333 62 3 3 chr5 14116911 14117199 -185512951 + AluY SINE Alu 1 288 -23 211 229 66 0 chr5 14117269 14117330 -185512820 - MIR SINE MIR -49 213 149 266 293 0 27 chr5 14118073 14118148 -185512002 + L2 LINE L2 3145 3217 -55 1359 259 91 77 chr5 14119460 14120110 -185510040 + L2 LINE L2 2247 2905 -409 303 28 0 0 chr5 14120430 14120466 -185509684 + (CA)n Simple_repeat Simple_repeat 2 37 0 319 248 131 27 chr5 14120467 14120866 -185509284 + L1MC5 LINE L1 4151 7513 -448 1905 157 64 6 chr5 14121184 14121528 -185508622 + THE1B LTR MaLR 1 364 0 10513 99 33 29 chr5 14121528 14123102 -185507048 + THE1B-int LTR MaLR 1 1580 0 2165 111 38 54 chr5 14123102 14123472 -185506678 + THE1B LTR MaLR 1 364 0 642 282 80 50 chr5 14123543 14124120 -185506030 + L1MC/D LINE L1 4892 5480 -802 641 215 12 0 chr5 14124221 14124384 -185505766 + GA-rich Low_complexity Low_complexity 3 167 0 2112 128 0 0 chr5 14124421 14124709 -185505441 + AluSx SINE Alu 1 288 -24 396 332 122 52 chr5 14124812 14125082 -185505068 + L2 LINE L2 2866 3155 -158 581 260 18 40 chr5 14127606 14127829 -185502321 - MER20 DNA MER1_type 0 219 2 2323 101 3 3 chr5 14127881 14128189 -185501961 - AluSp SINE Alu 0 313 6 1448 209 34 90 chr5 14128577 14129030 -185501120 + MLT1D LTR MaLR 1 421 -84 1796 188 0 0 chr5 14129030 14129317 -185500833 + AluJo SINE Alu 4 290 -22 1448 209 34 90 chr5 14129317 14129398 -185500752 + MLT1D LTR MaLR 421 505 0 186 264 75 0 chr5 14129606 14129659 -185500491 + L2 LINE L2 3201 3257 -15 1206 105 2 0 chr5 14131248 14131718 -185498432 + (CTA)n Simple_repeat Simple_repeat 1 471 0 4087 184 85 14 chr5 14131807 14133085 -185497065 - L1MA5A LINE L1 -5 6292 4939 6366 174 25 29 chr5 14133149 14133839 -185496311 - L1MA5A LINE L1 -1207 4939 4247 6918 60 8 0 chr5 14133839 14135199 -185494951 - L1PA7 LINE L1 -11 6143 4778 6366 174 25 29 chr5 14135199 14136010 -185494140 - L1MA5A LINE L1 -1899 4247 3445 4325 174 47 38 chr5 14136004 14137144 -185493006 + L1MA5A LINE L1 2296 3446 -2700 * 753 180 0 0 chr5 14137146 14137307 -185492843 - MER53 DNA DNA -28 161 1 2416 91 0 0 chr5 14137622 14137929 -185492221 - AluY SINE Alu -4 307 1 21 0 0 0 chr5 14138190 14138211 -185491939 + AT_rich Low_complexity Low_complexity 1 21 0 1956 161 70 0 chr5 14138219 14138591 -185491559 - L1MC3 LINE L1 -88 7697 7300 2172 132 0 16 chr5 14139396 14139699 -185490451 - AluSg SINE Alu -12 298 1 255 209 43 87 chr5 14141316 14141431 -185488719 - L2 LINE L2 -100 3213 3104 247 330 21 0 chr5 14141649 14141743 -185488407 - L2 LINE L2 -669 2645 2550 1117 226 80 50 chr5 14142223 14142586 -185487564 + MLT1A2 LTR MaLR 1 374 0 400 313 95 9 chr5 14146568 14147034 -185483116 + L1ME4a LINE L1 5316 5822 -299 306 264 85 0 chr5 14147133 14147239 -185482911 + L1ME4a LINE L1 6004 6118 -3 384 275 26 52 chr5 14150492 14150685 -185479465 - MIR SINE MIR -53 209 22 26 0 0 0 chr5 14151328 14151354 -185478796 + AT_rich Low_complexity Low_complexity 1 26 0 417 292 134 90 chr5 14154427 14155280 -185474870 + L1M2 LINE L1 291 1142 -5707 209 319 11 11 chr5 14155830 14155921 -185474229 + CT-rich Low_complexity Low_complexity 3 93 0 315 293 16 81 chr5 14158351 14158474 -185471676 - L2 LINE L2 0 3313 3199 236 273 0 45 chr5 14159118 14159206 -185470944 + MIR SINE MIR 172 255 -7 296 310 41 0 chr5 14160929 14161074 -185469076 + L1M2 LINE L1 3401 3551 -3297 24 53 0 0 chr5 14161206 14161244 -185468906 + AT_rich Low_complexity Low_complexity 1 38 0 2067 134 0 0 chr5 14161522 14161847 -185468303 + AluSx SINE Alu 1 325 0 1579 168 50 92 chr5 14162069 14162199 -185467951 + MLT1B LTR MaLR 1 135 -255 2456 93 3 0 chr5 14162199 14162510 -185467640 + AluSx SINE Alu 1 312 0 1579 168 50 92 chr5 14162510 14162783 -185467367 + MLT1B LTR MaLR 135 387 -3 1194 260 140 22 chr5 14163067 14164216 -185465934 + L1MDa LINE L1 1687 2982 -3558 1037 225 42 123 chr5 14164274 14164595 -185465555 + MLT1F1 LTR MaLR 69 414 -153 428 0 19 0 chr5 14164595 14164647 -185465503 + (CA)n Simple_repeat Simple_repeat 1 53 0 1037 225 42 123 chr5 14164647 14164800 -185465350 + MLT1F1 LTR MaLR 414 496 -71 2139 135 0 0 chr5 14164800 14165104 -185465046 - AluSx SINE Alu -8 304 1 1037 225 42 123 chr5 14165104 14165171 -185464979 + MLT1F1 LTR MaLR 496 567 0 30 0 0 0 chr5 14165210 14165240 -185464910 + AT_rich Low_complexity Low_complexity 1 30 0 218 56 28 0 chr5 14165320 14165356 -185464794 + (TA)n Simple_repeat Simple_repeat 1 37 0 851 283 85 34 chr5 14165360 14166032 -185464118 + L1MDa LINE L1 3873 4578 -1962 1922 194 47 33 chr5 14166040 14166530 -185463620 + MLT1D LTR MaLR 9 505 0 946 269 55 16 chr5 14166620 14167130 -185463020 + L1MDa LINE L1 4715 5244 -1296 280 260 28 66 chr5 14167178 14167359 -185462791 - Charlie2 DNA MER1_type -2610 252 79 2067 185 19 19 chr5 14168100 14168511 -185461639 + LTR57 LTR ERVL 1 411 0 397 330 144 3 chr5 14168705 14168990 -185461160 + L3 LINE CR1 560 884 -693 217 171 0 0 chr5 14170130 14170165 -185459985 - L3 LINE CR1 -978 599 565 1595 149 0 8 chr5 14170401 14170643 -185459507 + AluJo SINE Alu 64 303 -9 1740 162 23 44 chr5 14170919 14171307 -185458843 - MLT1B LTR MaLR -4 386 7 908 303 141 53 chr5 14171416 14172030 -185458120 - L2 LINE L2 0 3313 2644 1993 142 39 31 chr5 14172090 14172450 -185457700 + THE1B LTR MaLR 1 363 -1 572 115 50 86 chr5 14173632 14173771 -185456379 + MLT1B LTR MaLR 1 134 -256 712 113 75 23 chr5 14173792 14173925 -185456225 + THE1C LTR MaLR 3 142 -233 984 70 5 153 chr5 14173928 14174143 -185456007 + THE1C-int LTR MaLR 1398 1580 0 1710 150 102 40 chr5 14174143 14174496 -185455654 + THE1C LTR MaLR 1 375 0 1170 134 101 0 chr5 14174498 14174715 -185455435 + MLT1B LTR MaLR 152 390 0 327 25 0 0 chr5 14174724 14174764 -185455386 + (TG)n Simple_repeat Simple_repeat 2 41 0 207 0 0 0 chr5 14174924 14174947 -185455203 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 243 270 26 115 chr5 14175495 14175534 -185454616 - L1M4 LINE L1 -1851 4295 4254 2313 97 0 0 chr5 14175534 14175832 -185454318 + AluSx SINE Alu 1 298 -14 243 270 26 115 chr5 14175832 14176016 -185454134 - L1M4 LINE L1 -1892 4254 4090 246 206 68 0 chr5 14177328 14177401 -185452749 + L1ME1 LINE L1 6089 6166 0 350 140 0 0 chr5 14177541 14177591 -185452559 + LTR29 LTR ERV1 3 52 -570 22 0 0 0 chr5 14178338 14178360 -185451790 + AT_rich Low_complexity Low_complexity 1 22 0 734 299 83 64 chr5 14178695 14179171 -185450979 - MLT1G1 LTR MaLR -4 591 101 2468 129 11 5 chr5 14179171 14179544 -185450606 + THE1C LTR MaLR 1 375 0 734 299 83 64 chr5 14179544 14179632 -185450518 - MLT1G1 LTR MaLR -494 101 16 316 350 10 0 chr5 14179650 14179753 -185450397 - MIR SINE MIR -6 256 153 252 367 114 6 chr5 14180144 14180302 -185449848 - MIR3 SINE MIR -10 198 24 23 33 0 0 chr5 14181004 14181034 -185449116 + AT_rich Low_complexity Low_complexity 1 30 0 261 189 38 0 chr5 14181403 14181456 -185448694 + MLT1B LTR MaLR 1 55 -335 246 128 0 0 chr5 14182106 14182145 -185448005 + (A)n Simple_repeat Simple_repeat 1 39 0 1068 218 29 124 chr5 14182148 14182534 -185447616 + MLT1B LTR MaLR 42 390 0 837 335 30 46 chr5 14182792 14183252 -185446898 + L1MB1 LINE L1 173 625 -5688 605 79 0 11 chr5 14183379 14183468 -185446682 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 2705 240 42 32 chr5 14183511 14184722 -185445428 + L1MB1 LINE L1 795 1895 -4489 10924 214 44 30 chr5 14184855 14185247 -185444903 + L1MB1 LINE L1 2170 2555 -3849 2184 176 28 30 chr5 14185247 14185674 -185444476 - MSTB LTR MaLR 0 426 1 10924 214 44 30 chr5 14185674 14185783 -185444367 + L1MB1 LINE L1 2555 2661 -3743 245 75 25 0 chr5 14185783 14185823 -185444327 + (TA)n Simple_repeat Simple_repeat 1 41 0 10924 214 44 30 chr5 14185823 14185983 -185444167 + L1MB1 LINE L1 2661 2817 -3587 1712 203 25 11 chr5 14185983 14186343 -185443807 - MLT1A1 LTR MaLR 0 365 1 10924 214 44 30 chr5 14186343 14186588 -185443562 + L1MB1 LINE L1 2817 3057 -3347 4123 162 25 6 chr5 14186588 14187296 -185442854 + MER72 LTR ERV1 1 722 0 10924 214 44 30 chr5 14187296 14187847 -185442303 + L1MB1 LINE L1 3057 3598 -2806 1377 255 28 6 chr5 14187847 14188204 -185441946 - MLT1A1 LTR MaLR 0 365 1 10924 214 44 30 chr5 14188204 14189012 -185441138 + L1MB1 LINE L1 3598 4393 -2011 386 52 0 17 chr5 14189012 14189070 -185441080 + (CA)n Simple_repeat Simple_repeat 2 58 0 10924 214 44 30 chr5 14189070 14189234 -185440916 + L1MB1 LINE L1 4393 4553 -1851 1832 219 14 0 chr5 14189234 14189591 -185440559 - MLT1A1 LTR MaLR 0 365 4 10924 214 44 30 chr5 14189591 14191078 -185439072 + L1MB1 LINE L1 4553 6155 -249 2147 281 79 27 chr5 14191187 14193298 -185436852 + L1ME1 LINE L1 1598 3775 -2440 971 270 22 32 chr5 14193317 14193394 -185436756 + L1PA13 LINE L1 1 77 -6710 2059 124 47 47 chr5 14193394 14193564 -185436586 + THE1B LTR MaLR 1 170 -194 2207 117 0 0 chr5 14193564 14193871 -185436279 + AluSq SINE Alu 1 307 -6 2059 124 47 47 chr5 14193871 14194064 -185436086 + THE1B LTR MaLR 169 364 0 11144 103 13 4 chr5 14194064 14195629 -185434521 + THE1B-int LTR MaLR 1 1580 0 2057 133 48 23 chr5 14195629 14195983 -185434167 + THE1B LTR MaLR 1 363 -1 971 270 22 32 chr5 14195983 14196181 -185433969 + L1PA13 LINE L1 74 275 -6512 2351 231 58 62 chr5 14196182 14196703 -185433447 + L1ME1 LINE L1 4376 4897 -1338 2465 57 3 0 chr5 14196703 14196999 -185433151 + AluY SINE Alu 2 298 -13 2351 231 58 62 chr5 14196999 14197318 -185432832 + L1ME1 LINE L1 4897 5216 -1019 2338 92 3 3 chr5 14197318 14197624 -185432526 + AluY SINE Alu 1 306 -5 2351 231 58 62 chr5 14197624 14197975 -185432175 + L1ME1 LINE L1 5216 5567 -668 2026 164 0 0 chr5 14197975 14198287 -185431863 + AluJb SINE Alu 1 312 0 2351 231 58 62 chr5 14198287 14198839 -185431311 + L1ME1 LINE L1 5567 6110 -125 2225 116 0 0 chr5 14198839 14199140 -185431010 - AluSx SINE Alu -11 301 1 2351 231 58 62 chr5 14199140 14199257 -185430893 + L1ME1 LINE L1 6110 6226 -9 701 137 41 14 chr5 14199743 14199889 -185430261 + L1MA8 LINE L1 6140 6289 -2 1609 182 11 0 chr5 14200175 14200439 -185429711 + AluJb SINE Alu 1 267 -45 2488 253 24 33 chr5 14200497 14201440 -185428710 - L1M4 LINE L1 -2368 3778 2844 210 372 28 28 chr5 14202362 14202507 -185427643 + MIR3 SINE MIR 58 202 -6 209 56 0 28 chr5 14202988 14203024 -185427126 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 564 250 18 0 chr5 14204039 14204207 -185425943 + MER104 DNA Tc2 5 175 -5 383 282 130 60 chr5 14204703 14205072 -185425078 - MLT1G LTR MaLR -6 584 190 354 100 0 0 chr5 14205074 14205134 -185425016 + (GA)n Simple_repeat Simple_repeat 2 61 0 190 366 24 0 chr5 14206299 14206381 -185423769 - MIR SINE MIR -28 234 151 388 295 9 9 chr5 14207013 14207125 -185423025 + MIR3 SINE MIR 90 201 -7 194 290 73 73 chr5 14207278 14207402 -185422748 + L3 LINE CR1 371 494 -1083 182 303 79 46 chr5 14207584 14207736 -185422414 + L3 LINE CR1 735 891 -686 2305 93 0 0 chr5 14207764 14208066 -185422084 + AluY SINE Alu 1 302 -9 704 181 44 0 chr5 14208066 14208248 -185421902 + Charlie5 DNA MER1_type 2435 2624 0 212 365 67 10 chr5 14208252 14208356 -185421794 + L3 LINE CR1 1219 1328 -249 396 103 0 0 chr5 14209694 14209752 -185420398 + (CA)n Simple_repeat Simple_repeat 2 59 0 196 253 0 133 chr5 14210534 14210617 -185419533 + L2 LINE L2 3198 3269 -44 979 184 102 105 chr5 14210667 14211058 -185419092 + MLT1B LTR MaLR 1 390 0 249 322 41 25 chr5 14211256 14211377 -185418773 + L2 LINE L2 3191 3313 0 5314 165 29 11 chr5 14211886 14212637 -185417513 + L1MA6 LINE L1 4924 5712 -588 261 0 0 0 chr5 14212637 14212666 -185417484 + (TA)n Simple_repeat Simple_repeat 1 29 0 5314 165 29 11 chr5 14212666 14213262 -185416888 + L1MA6 LINE L1 5712 6296 -4 24 0 0 0 chr5 14213491 14213515 -185416635 + AT_rich Low_complexity Low_complexity 1 24 0 29 60 0 0 chr5 14213858 14213908 -185416242 + AT_rich Low_complexity Low_complexity 1 50 0 492 336 86 12 chr5 14214266 14214510 -185415640 + MLT1K LTR MaLR 155 416 -172 2120 130 45 28 chr5 14214513 14214866 -185415284 - THE1B LTR MaLR 0 364 6 772 52 0 0 chr5 14215477 14215574 -185414576 + L1PA7 LINE L1 6052 6148 -6 23 33 0 0 chr5 14215577 14215607 -185414543 + AT_rich Low_complexity Low_complexity 1 30 0 2000 208 18 0 chr5 14216328 14216727 -185413423 + MLT2C2 LTR ERVL 1 406 -58 192 158 0 0 chr5 14216750 14216788 -185413362 + (TG)n Simple_repeat Simple_repeat 2 39 0 2080 273 111 36 chr5 14218625 14219879 -185410271 + L2 LINE L2 1835 3189 -124 260 179 0 0 chr5 14219879 14219935 -185410215 - MLT2C2 LTR ERVL -408 56 1 342 265 31 10 chr5 14219994 14220092 -185410058 + L2 LINE L2 3214 3313 0 283 325 67 8 chr5 14220202 14220322 -185409828 + MIR SINE MIR 23 149 -113 310 312 172 13 chr5 14220735 14220892 -185409258 + MIR SINE MIR 14 195 -67 540 267 56 11 chr5 14221181 14221361 -185408789 + MER5A DNA MER1_type 2 189 0 211 280 32 89 chr5 14221551 14221708 -185408442 - L2 LINE L2 -13 3300 3153 24 53 0 0 chr5 14222393 14222431 -185407719 + AT_rich Low_complexity Low_complexity 1 38 0 281 266 34 110 chr5 14222699 14222936 -185407214 - L2 LINE L2 -261 3052 2834 2434 193 53 12 chr5 14224851 14225364 -185404786 - MER44D DNA MER2_type -16 589 1 1288 202 73 48 chr5 14225999 14226356 -185403794 + MLT1A2 LTR MaLR 5 370 -4 356 235 18 15 chr5 14226750 14226913 -185403237 + GA-rich Low_complexity Low_complexity 3 273 0 26 30 0 0 chr5 14227365 14227398 -185402752 + AT_rich Low_complexity Low_complexity 1 33 0 419 297 114 20 chr5 14227788 14227990 -185402160 - L1M4 LINE L1 -3025 3121 2901 228 67 0 0 chr5 14228270 14228300 -185401850 + (CAT)n Simple_repeat Simple_repeat 1 30 0 1314 304 95 13 chr5 14229989 14230692 -185399458 + MER69B DNA AcHobo 114 874 -352 595 199 121 48 chr5 14230692 14230858 -185399292 + MER20 DNA MER1_type 2 179 -40 1188 8 0 0 chr5 14230858 14230991 -185399159 + AluYb8 SINE Alu 184 316 -2 303 100 0 0 chr5 14230991 14231031 -185399119 + MER20 DNA MER1_type 172 211 -8 818 213 158 26 chr5 14231036 14231346 -185398804 + MER69B DNA AcHobo 863 1213 -13 712 261 132 69 chr5 14231384 14231863 -185398287 - MLT1H LTR MaLR 0 549 41 245 206 29 0 chr5 14231935 14232003 -185398147 - L1MEd LINE L1 -4992 1127 1058 1565 137 391 44 chr5 14232003 14232433 -185397717 - LTR18B LTR ERVL -13 601 23 612 294 64 47 chr5 14232449 14232915 -185397235 - L1MEd LINE L1 -5074 1045 572 2241 130 28 0 chr5 14233114 14233468 -185396682 - THE1B LTR MaLR 0 364 1 344 276 135 21 chr5 14233531 14233723 -185396427 - L1MEd LINE L1 -5904 215 2 25 0 0 0 chr5 14234360 14234385 -185395765 + AT_rich Low_complexity Low_complexity 1 25 0 1394 175 56 28 chr5 14234723 14235009 -185395141 - AluJo SINE Alu -8 294 1 195 69 0 0 chr5 14236034 14236063 -185394087 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 267 305 136 0 chr5 14236070 14236188 -185393962 - L2 LINE L2 0 3313 3180 598 298 41 25 chr5 14236221 14236537 -185393613 - L1MC/D LINE L1 -2162 5646 5326 1723 223 113 18 chr5 14236555 14237121 -185393029 - L1MC4a LINE L1 -114 7694 7075 285 361 19 7 chr5 14238151 14238306 -185391844 + MLT1I LTR MaLR 253 409 0 339 235 12 0 chr5 14238324 14238409 -185391741 - L1P5 LINE L1 -471 5680 5595 477 264 8 0 chr5 14238550 14238675 -185391475 - Charlie1 DNA MER1_type -7 2754 2629 185 208 42 10 chr5 14238815 14238911 -185391239 + (TA)n Simple_repeat Simple_repeat 1 99 0 1330 210 162 125 chr5 14239067 14239653 -185390497 - MLT1E2 LTR MaLR -4 622 43 503 230 37 15 chr5 14239711 14239846 -185390304 + MLT1E LTR MaLR 1 138 -455 24 32 0 0 chr5 14241632 14241663 -185388487 + AT_rich Low_complexity Low_complexity 1 31 0 900 294 49 53 chr5 14243487 14243980 -185386170 + MLT1J LTR MaLR 21 511 0 2550 190 141 136 chr5 14244682 14245244 -185384906 + L1MD3 LINE L1 6720 7277 -718 502 220 17 8 chr5 14245244 14245362 -185384788 + MLT1F1 LTR MaLR 1 119 -448 2550 190 141 136 chr5 14245362 14245944 -185384206 + L1MD3 LINE L1 7277 7988 -7 193 93 0 47 chr5 14247237 14247280 -185382870 + (TA)n Simple_repeat Simple_repeat 2 42 0 202 143 16 48 chr5 14247417 14247480 -185382670 + (TA)n Simple_repeat Simple_repeat 1 61 0 242 179 0 75 chr5 14249661 14249728 -185380422 + GA-rich Low_complexity Low_complexity 3 64 0 22 0 0 0 chr5 14250880 14250902 -185379248 + AT_rich Low_complexity Low_complexity 1 22 0 364 62 10 0 chr5 14251501 14251553 -185378597 - Alu SINE Alu -7 293 249 4116 223 15 25 chr5 14251554 14252541 -185377609 - L1P5 LINE L1 -822 5324 4347 6826 59 14 1 chr5 14252541 14253711 -185376439 + L1PA7 LINE L1 4952 6139 -15 4116 223 15 25 chr5 14253711 14253811 -185376339 - L1P5 LINE L1 -1799 4347 4248 669 158 0 0 chr5 14253832 14253946 -185376204 - L1MA2 LINE L1 0 6304 6191 2873 105 20 11 chr5 14254047 14254496 -185375654 - L1MA2 LINE L1 -48 6256 5804 2024 219 26 0 chr5 14254482 14254934 -185375216 - L1 LINE L1 -1886 4260 3797 * 5227 125 11 16 chr5 14254927 14255751 -185374399 + L1PA16 LINE L1 5342 6161 -5 2047 110 33 0 chr5 14255899 14256200 -185373950 + AluSq SINE Alu 1 311 -2 26 0 0 0 chr5 14257000 14257026 -185373124 + AT_rich Low_complexity Low_complexity 1 26 0 386 238 24 0 chr5 14257078 14257162 -185372988 - MER5A DNA MER1_type -77 112 27 995 213 51 121 chr5 14257220 14257485 -185372665 - Charlie4a DNA MER1_type -1453 508 289 1549 123 111 0 chr5 14257485 14257728 -185372422 + AluSx SINE Alu 6 275 -37 995 213 51 121 chr5 14257728 14257932 -185372218 - Charlie4a DNA MER1_type -1672 289 72 28 61 0 0 chr5 14258116 14258165 -185371985 + AT_rich Low_complexity Low_complexity 1 49 0 2211 117 0 0 chr5 14258283 14258581 -185371569 + AluSg SINE Alu 1 298 -12 198 348 130 0 chr5 14258787 14258879 -185371271 - MIR SINE MIR -112 150 47 234 333 20 0 chr5 14259539 14259638 -185370512 + HAL1 LINE L1 1501 1601 -906 1779 176 22 25 chr5 14259917 14260274 -185369876 - MLT1A1 LTR MaLR -6 359 4 264 247 35 0 chr5 14260275 14260360 -185369790 + HAL1b LINE L1 704 791 -557 191 219 47 31 chr5 14260390 14260454 -185369696 - MIR SINE MIR -7 255 191 378 298 144 49 chr5 14260454 14260803 -185369347 + HAL1b LINE L1 784 1193 -155 474 120 0 0 chr5 14260803 14260878 -185369272 + (TA)n Simple_repeat Simple_repeat 1 75 0 378 298 144 49 chr5 14260878 14261014 -185369136 + HAL1b LINE L1 1193 1315 -33 2514 184 80 11 chr5 14262644 14262672 -185367478 - L1MC1 LINE L1 -193 6140 6115 618 191 0 8 chr5 14262672 14262803 -185367347 - L1MB7 LINE L1 0 6184 6055 2514 184 80 11 chr5 14262803 14263327 -185366823 - L1MC1 LINE L1 -218 6115 5550 226 247 45 11 chr5 14263337 14263426 -185366724 - L1MC1 LINE L1 -1759 4387 4296 240 35 0 0 chr5 14264199 14264228 -185365922 + (CA)n Simple_repeat Simple_repeat 1 29 0 2177 161 57 43 chr5 14264297 14264433 -185365717 + L1MB8 LINE L1 5637 5770 -408 3136 133 36 82 chr5 14264433 14264781 -185365369 + MER7C DNA MER2_type 2 310 -2718 2104 125 6 3 chr5 14264781 14265092 -185365058 - AluSx SINE Alu 0 312 1 3136 133 36 82 chr5 14265092 14265373 -185364777 + MER7C DNA MER2_type 310 602 0 2177 161 57 43 chr5 14265373 14265765 -185364385 + L1MB8 LINE L1 5770 6172 -6 1774 196 32 50 chr5 14265839 14266278 -185363872 + MSTB2 LTR MaLR 15 445 -12 281 296 123 37 chr5 14266933 14267095 -185363055 - MIR3 SINE MIR -5 203 28 360 292 31 84 chr5 14267342 14267568 -185362582 + MIR SINE MIR 43 256 -6 185 136 0 23 chr5 14267582 14267626 -185362524 + (CAT)n Simple_repeat Simple_repeat 2 44 0 24 0 0 0 chr5 14268297 14268321 -185361829 + AT_rich Low_complexity Low_complexity 1 24 0 226 330 0 75 chr5 14268724 14268830 -185361320 - MIR3 SINE MIR -47 161 64 366 250 167 15 chr5 14269351 14269483 -185360667 + MIR SINE MIR 17 168 -94 325 305 193 27 chr5 14269517 14269530 -185360620 + LTR16B LTR ERVL 12 22 -442 1796 190 26 26 chr5 14269530 14269920 -185360230 - MLT1B LTR MaLR 0 390 1 325 305 193 27 chr5 14269920 14270165 -185359985 + LTR16B LTR ERVL 22 313 -151 507 113 0 0 chr5 14270165 14270245 -185359905 + (TTCC)n Simple_repeat Simple_repeat 2 81 0 955 253 15 23 chr5 14270249 14270514 -185359636 + MER89-int LTR ERV1 4418 4680 -2121 2161 285 74 40 chr5 14270537 14271482 -185358668 - MER89-int LTR ERV1 -2379 4422 3446 2319 255 88 55 chr5 14271506 14272460 -185357690 - MER89-int LTR ERV1 -3473 3328 213 2391 251 73 24 chr5 14272625 14273379 -185356771 - MER89-int LTR ERV1 -4270 2531 1741 1279 284 99 63 chr5 14273429 14273625 -185356525 - MER89-int LTR ERV1 -6080 721 534 261 0 0 0 chr5 14273625 14273654 -185356496 + (CAAAA)n Simple_repeat Simple_repeat 4 32 0 1279 284 99 63 chr5 14273654 14273983 -185356167 - MER89-int LTR ERV1 -6267 534 218 2001 134 137 13 chr5 14273983 14274364 -185355786 - MSTA LTR MaLR 0 428 1 1279 284 99 63 chr5 14274364 14274419 -185355731 - MER89-int LTR ERV1 -6583 218 166 1951 143 53 34 chr5 14274419 14274776 -185355374 + THE1B LTR MaLR 1 364 0 1279 284 99 63 chr5 14274776 14274889 -185355261 - MER89-int LTR ERV1 -6635 166 1 1811 224 0 38 chr5 14274891 14275367 -185354783 - MER89 LTR ERV1 -2 557 2 196 332 128 33 chr5 14276014 14276225 -185353925 + L2 LINE L2 2514 2744 -570 25 95 0 0 chr5 14276448 14276522 -185353628 + AT_rich Low_complexity Low_complexity 1 74 0 206 320 0 0 chr5 14279501 14279551 -185350599 + MIR SINE MIR 97 146 -62 1121 67 0 0 chr5 14279717 14279851 -185350299 + AluSg/x SINE Alu 156 289 -23 29 0 0 0 chr5 14282220 14282249 -185347901 + AT_rich Low_complexity Low_complexity 1 29 0 35 24 0 0 chr5 14282432 14282474 -185347676 + AT_rich Low_complexity Low_complexity 1 42 0 2087 99 3 13 chr5 14283727 14284030 -185346120 + AluSc SINE Alu 1 300 -9 23 0 0 0 chr5 14284366 14284389 -185345761 + AT_rich Low_complexity Low_complexity 1 23 0 222 91 0 0 chr5 14284907 14284940 -185345210 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1969 127 3 0 chr5 14284944 14285227 -185344923 - AluY SINE Alu -27 284 1 493 298 72 44 chr5 14285543 14285932 -185344218 - L1M4 LINE L1 -2055 4091 3692 1517 161 14 3 chr5 14286033 14286324 -185343826 - L1MA9 LINE L1 -2 6310 6017 415 342 45 23 chr5 14286324 14286634 -185343516 - L1M4 LINE L1 -2938 3208 2892 22 35 0 0 chr5 14286975 14287004 -185343146 + AT_rich Low_complexity Low_complexity 1 29 0 291 140 0 0 chr5 14287291 14287341 -185342809 + (TG)n Simple_repeat Simple_repeat 1 50 0 2374 65 0 3 chr5 14287565 14287873 -185342277 - AluY SINE Alu -4 307 1 21 0 0 0 chr5 14288649 14288670 -185341480 + AT_rich Low_complexity Low_complexity 1 21 0 409 330 90 29 chr5 14289497 14289809 -185340341 - L1ME3A LINE L1 -312 5927 5597 299 291 56 42 chr5 14289838 14290051 -185340099 - L1ME3A LINE L1 -600 5631 5416 1394 128 179 0 chr5 14290105 14290362 -185339788 - AluJb SINE Alu -9 303 1 324 82 49 16 chr5 14290494 14290555 -185339595 - L1PA13 LINE L1 0 6163 6101 4558 92 0 3 chr5 14290556 14291178 -185338972 - L1PA13 LINE L1 -35 6128 5509 478 310 98 40 chr5 14291315 14291786 -185338364 - L1ME3A LINE L1 -1567 4648 4151 652 227 0 0 chr5 14291835 14291967 -185338183 - FLAM_A SINE Alu -1 132 1 192 152 0 0 chr5 14292013 14292046 -185338104 + (TA)n Simple_repeat Simple_repeat 2 34 0 274 276 23 0 chr5 14292049 14292136 -185338014 - L1MC4 LINE L1 -1339 6703 6615 245 318 0 0 chr5 14292096 14292184 -185337966 + L1MC4 LINE L1 6615 6702 -1340 * 280 309 90 9 chr5 14292301 14292535 -185337615 - HAL1b LINE L1 -815 602 441 1711 224 6 8 chr5 14292614 14292980 -185337170 + MLT1A1 LTR MaLR 1 365 0 724 150 0 0 chr5 14292982 14293102 -185337048 + MLT1A1-int LTR MaLR 2 121 -1614 716 199 68 12 chr5 14343102 14343263 -185286887 - MLT1D LTR MaLR -335 170 1 1344 170 156 22 chr5 14344167 14344486 -185285664 + MLT2D LTR ERVL 1 376 -38 906 29 36 7 chr5 14344486 14344625 -185285525 + (TCTA)n Simple_repeat Simple_repeat 2 144 0 1344 170 156 22 chr5 14344625 14344670 -185285480 + MLT2D LTR ERVL 376 414 0 423 308 56 69 chr5 14344990 14345367 -185284783 + LTR16C LTR ERVL 117 488 -3 546 207 0 25 chr5 14345503 14345624 -185284526 + L1MD2 LINE L1 6013 6130 -229 270 81 0 0 chr5 14345628 14345665 -185284485 + (CA)n Simple_repeat Simple_repeat 2 38 0 566 212 68 0 chr5 14345673 14345819 -185284331 + L1MD2 LINE L1 6182 6337 -22 223 299 15 0 chr5 14347045 14347112 -185283038 - MIR3 SINE MIR -22 186 119 6512 151 43 13 chr5 14347971 14349166 -185280984 + Tigger3b DNA MER2_type 1 1231 0 333 0 0 0 chr5 14349409 14349446 -185280704 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1718 114 38 0 chr5 14349449 14349711 -185280439 - L1PA10 LINE L1 -20 6148 5877 * 2056 68 0 0 chr5 14349707 14349972 -185280178 + L1PA10 LINE L1 5617 5881 -287 22 0 0 0 chr5 14350248 14350270 -185279880 + AT_rich Low_complexity Low_complexity 1 22 0 13427 138 12 16 chr5 14350835 14353052 -185277098 + L1P LINE L1 11 2219 -3927 1541 115 5 9 chr5 14353052 14353297 -185276853 + AluSg/x SINE Alu 66 309 0 309 133 0 0 chr5 14353297 14353342 -185276808 + L1MC1 LINE L1 5593 5637 -2171 1538 154 0 8 chr5 14353389 14353642 -185276508 + L1MC1 LINE L1 6069 6319 -14 12042 68 11 0 chr5 14354344 14356442 -185273708 + L1PA6 LINE L1 3734 5856 -298 2861 38 8 16 chr5 14356442 14356808 -185273342 + L1PA6 LINE L1 5787 6149 -5 261 348 89 19 chr5 14356977 14357236 -185272914 + L1PA15 LINE L1 4 280 -7301 16609 209 18 19 chr5 14358239 14363505 -185266645 + L1PA15 LINE L1 2319 7588 -15 51 65 0 0 chr5 14363535 14363628 -185266522 + AT_rich Low_complexity Low_complexity 1 93 0 28 0 0 0 chr5 14363666 14363694 -185266456 + AT_rich Low_complexity Low_complexity 1 28 0 356 290 161 51 chr5 14363769 14363986 -185266164 - MLT1H LTR MaLR 0 549 309 231 252 237 37 chr5 14364051 14364186 -185265964 - MLT1H LTR MaLR -387 162 1 25 0 0 0 chr5 14364285 14364310 -185265840 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 14364923 14364954 -185265196 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr5 14367252 14367290 -185262860 + AT_rich Low_complexity Low_complexity 1 38 0 195 42 0 0 chr5 14367642 14367666 -185262484 + (TA)n Simple_repeat Simple_repeat 2 25 0 627 326 72 14 chr5 14368825 14369267 -185260883 + L1MEd LINE L1 730 1197 -5219 2428 130 5 16 chr5 14369277 14369645 -185260505 + THE1B LTR MaLR 1 364 0 25 65 0 0 chr5 14369690 14369736 -185260414 + AT_rich Low_complexity Low_complexity 1 46 0 251 232 107 54 chr5 14370131 14370243 -185259907 + L1MEd LINE L1 1592 1859 -4567 21 0 0 0 chr5 14370926 14370947 -185259203 + AT_rich Low_complexity Low_complexity 1 21 0 1614 173 29 45 chr5 14371591 14371920 -185258230 - L1MA9 LINE L1 0 6312 5988 1589 165 210 11 chr5 14371920 14372277 -185257873 - MSTA LTR MaLR 0 428 1 1614 173 29 45 chr5 14372277 14372329 -185257821 - L1MA9 LINE L1 -324 5988 5937 1901 150 48 3 chr5 14372348 14372682 -185257468 - L1PB4 LINE L1 -38 6118 5770 804 220 12 3 chr5 14372690 14373005 -185257145 + CT-rich Low_complexity Low_complexity 1 317 0 282 70 0 53 chr5 14373031 14373088 -185257062 + (TCC)n Simple_repeat Simple_repeat 3 56 0 749 242 6 17 chr5 14373090 14373268 -185256882 - FRAM SINE Alu 0 176 1 1855 178 14 6 chr5 14373273 14373621 -185256529 - L1PB4 LINE L1 -374 5782 5432 1974 188 22 18 chr5 14373720 14374168 -185255982 - L1PB4 LINE L1 -1333 4813 4364 2640 168 21 6 chr5 14374168 14374685 -185255465 - L1MA2 LINE L1 -6 6298 5774 1363 134 4 34 chr5 14374685 14375056 -185255094 - L1MA2 LINE L1 -743 5403 5117 240 305 12 0 chr5 14375055 14375137 -185255013 - L1PB4 LINE L1 -3432 2714 2632 * 4578 194 25 6 chr5 14375136 14376123 -185254027 - L1MA2 LINE L1 -1759 4387 3382 2556 59 0 0 chr5 14376597 14376903 -185253247 - AluY SINE Alu -5 306 1 1651 116 17 0 chr5 14377020 14377261 -185252889 + MER47A DNA MER2_type 22 266 -100 1567 132 0 60 chr5 14377356 14377637 -185252513 + L1P LINE L1 3362 3625 -2521 28 0 0 0 chr5 14377686 14377714 -185252436 + AT_rich Low_complexity Low_complexity 1 28 0 595 307 18 12 chr5 14378226 14378392 -185251758 + LTR16C LTR ERVL 68 234 -257 30243 114 11 22 chr5 14378394 14384817 -185245333 + L1PA7 LINE L1 16 6461 -8 685 248 57 1 chr5 14385637 14385942 -185244208 + MLT1A2 LTR MaLR 7 370 -4 2233 219 68 3 chr5 14385946 14386583 -185243567 + MLT1A2-int LTR MaLR 1 889 -482 230 344 0 16 chr5 14386713 14386774 -185243376 + MLT1A2-int LTR MaLR 1260 1319 -416 * 1948 235 65 5 chr5 14386770 14387217 -185242933 + MLT1A2-int LTR MaLR 1262 1735 0 1352 228 94 12 chr5 14387217 14387559 -185242591 + MLT1A2 LTR MaLR 1 370 -4 5410 159 108 8 chr5 14390060 14391107 -185239043 + Tigger1 DNA MER2_type 1 1152 -1266 376 378 22 16 chr5 14391110 14391295 -185238855 - L2 LINE L2 -299 3014 2829 2226 98 0 22 chr5 14391401 14391744 -185238406 + AluSc SINE Alu 1 336 0 24 32 0 0 chr5 14391975 14392006 -185238144 + AT_rich Low_complexity Low_complexity 1 31 0 205 86 0 29 chr5 14392314 14392349 -185237801 + (TAAAG)n Simple_repeat Simple_repeat 2 35 0 670 298 39 21 chr5 14392510 14392898 -185237252 + L1 LINE L1 3587 3985 -2161 271 301 124 26 chr5 14392996 14393222 -185236928 - L2 LINE L2 -453 2861 2614 2219 157 14 0 chr5 14393560 14393975 -185236175 - L1P LINE L1 -2771 3375 2955 5069 102 7 0 chr5 14393992 14394711 -185235439 + L1PA10 LINE L1 5440 6163 -5 36 23 0 0 chr5 14394712 14394755 -185235395 + AT_rich Low_complexity Low_complexity 1 43 0 225 287 43 85 chr5 14395537 14395725 -185234425 - MIR3 SINE MIR -28 180 1 1501 173 3 48 chr5 14396125 14396262 -185233888 + AluJo SINE Alu 7 126 -186 192 97 0 0 chr5 14396262 14396293 -185233857 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1501 173 3 48 chr5 14396293 14396444 -185233706 + AluJo SINE Alu 126 282 -30 27 0 0 0 chr5 14396445 14396472 -185233678 + AT_rich Low_complexity Low_complexity 1 27 0 263 349 37 9 chr5 14396539 14396648 -185233502 - MIR SINE MIR -121 141 30 2315 81 0 3 chr5 14396723 14397020 -185233130 - AluY SINE Alu -15 296 1 181 339 142 47 chr5 14398054 14398181 -185231969 + L2 LINE L2 3134 3272 0 1863 156 148 8 chr5 14398604 14398975 -185231175 + MSTA LTR MaLR 6 428 0 452 222 0 9 chr5 14399194 14399302 -185230848 - FLAM_C SINE Alu -36 107 1 261 374 106 11 chr5 14399444 14399623 -185230527 - L2 LINE L2 -4 3268 3073 197 159 23 0 chr5 14400453 14400497 -185229653 + GA-rich Low_complexity Low_complexity 3 47 0 810 270 64 64 chr5 14403080 14403170 -185226980 - MLT1E LTR MaLR 0 593 504 929 193 6 11 chr5 14403170 14403346 -185226804 + FAM SINE Alu 1 175 0 810 270 64 64 chr5 14403346 14403792 -185226358 - MLT1E LTR MaLR -89 504 3 41 58 0 0 chr5 14405143 14405212 -185224938 + AT_rich Low_complexity Low_complexity 1 69 0 21 71 0 0 chr5 14405550 14405592 -185224558 + AT_rich Low_complexity Low_complexity 1 42 0 970 283 77 74 chr5 14408981 14409603 -185220547 + L1ME LINE L1 1 624 -5446 653 194 252 34 chr5 14409611 14409905 -185220245 - LTR37A LTR ERV1 -8 418 61 2766 143 5 5 chr5 14409918 14410346 -185219804 - MSTA LTR MaLR 0 428 1 1747 118 20 0 chr5 14410402 14410657 -185219493 - AluSq SINE Alu -53 260 1 1978 258 21 2 chr5 14410664 14411179 -185218971 + L1ME1 LINE L1 5584 6108 -58 1272 184 30 110 chr5 14411185 14411553 -185218597 + MLT1A1 LTR MaLR 1 420 -37 2693 7 0 0 chr5 14411553 14411848 -185218302 - AluYa5 SINE Alu 0 311 17 1272 184 30 110 chr5 14411848 14411880 -185218270 + MLT1A1 LTR MaLR 420 453 -4 332 155 0 17 chr5 14411887 14411945 -185218205 + MLT1A1-int LTR MaLR 5 61 -1310 269 77 0 0 chr5 14411945 14411984 -185218166 + MLT2A1 LTR ERVL 1 39 -405 511 269 22 0 chr5 14412640 14412774 -185217376 + MLT1D LTR MaLR 287 423 -82 1660 233 81 11 chr5 14412793 14413261 -185216889 - MLT1D LTR MaLR -2 503 3 199 338 0 0 chr5 14413271 14413342 -185216808 - L2 LINE L2 -48 3224 3154 497 305 81 29 chr5 14414577 14414755 -185215395 - L1MC4 LINE L1 -136 7906 7739 2331 69 0 13 chr5 14414755 14415061 -185215089 - AluY SINE Alu -9 302 1 497 305 81 29 chr5 14415061 14415226 -185214924 - L1MC4 LINE L1 -303 7739 7545 1507 281 112 20 chr5 14415274 14416377 -185213773 - L1MC4 LINE L1 -636 7406 6097 262 320 10 0 chr5 14416430 14416530 -185213620 - L1M4 LINE L1 -1170 4976 4876 203 179 0 0 chr5 14416689 14416728 -185213422 + (TA)n Simple_repeat Simple_repeat 1 39 0 896 317 48 8 chr5 14418091 14418447 -185211703 - LTR16A LTR ERVL -5 445 76 2583 155 9 16 chr5 14419258 14419685 -185210465 - MSTC LTR MaLR 0 428 5 22 0 0 0 chr5 14420045 14420067 -185210083 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr5 14420327 14420374 -185209776 + AT_rich Low_complexity Low_complexity 1 47 0 1515 180 21 28 chr5 14420523 14420806 -185209344 + AluJb SINE Alu 1 281 -31 182 138 0 0 chr5 14422481 14422510 -185207640 + MER5B DNA MER1_type 21 49 -129 318 26 0 0 chr5 14422540 14422579 -185207571 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 5263 2 0 0 chr5 14422579 14423161 -185206989 - L1HS LINE L1 -16 6139 5558 464 297 16 23 chr5 14423171 14423299 -185206851 - MER5A DNA MER1_type -54 135 9 908 349 44 14 chr5 14423498 14423865 -185206285 + L2 LINE L2 142 519 -2795 211 315 98 0 chr5 14424294 14424386 -185205764 + L2 LINE L2 3213 3313 0 34 0 0 0 chr5 14424506 14424540 -185205610 + AT_rich Low_complexity Low_complexity 1 34 0 2229 47 0 106 chr5 14425595 14425934 -185204216 + AluY SINE Alu 1 303 -8 2170 173 57 40 chr5 14425959 14426415 -185203735 - MLT2C2 LTR ERVL 0 464 1 387 269 19 0 chr5 14426707 14426815 -185203335 - MLT1L LTR MaLR -364 251 142 418 392 76 3 chr5 14426986 14427274 -185202876 + L2 LINE L2 2291 2599 -715 226 217 0 0 chr5 14427322 14427391 -185202759 + L1MC4 LINE L1 6635 6703 -1339 195 129 0 0 chr5 14427391 14427422 -185202728 + (TA)n Simple_repeat Simple_repeat 1 31 0 330 264 38 0 chr5 14427439 14427545 -185202605 + (TA)n Simple_repeat Simple_repeat 2 111 0 185 359 113 0 chr5 14427833 14427939 -185202211 + L2 LINE L2 3122 3239 -33 11928 198 24 26 chr5 14427956 14430520 -185199630 - L1PA15 LINE L1 -12 7591 5026 252 149 0 0 chr5 14430520 14430567 -185199583 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 2256 89 7 3 chr5 14430567 14430859 -185199291 - AluSg SINE Alu -17 293 1 11928 198 24 26 chr5 14430859 14433887 -185196263 - L1PA15 LINE L1 -2575 5028 1990 398 307 71 17 chr5 14433947 14434185 -185195965 - L1ME LINE L1 -374 5747 5497 231 259 0 0 chr5 14434271 14434325 -185195825 - L1ME LINE L1 -753 5421 5368 258 185 19 0 chr5 14434651 14434705 -185195445 - L1MC/D LINE L1 -2013 5795 5741 1170 220 57 14 chr5 14434835 14435117 -185195033 + MLT1D LTR MaLR 1 294 -211 442 252 162 56 chr5 14435575 14435841 -185194309 + L2 LINE L2 3020 3313 0 279 167 0 0 chr5 14439033 14439099 -185191051 + GA-rich Low_complexity Low_complexity 2 67 0 989 172 28 189 chr5 14440275 14440629 -185189521 + MLT1A1 LTR MaLR 64 360 -5 303 285 124 85 chr5 14441170 14441524 -185188626 - L1MEc LINE L1 -4087 2309 1942 371 324 76 25 chr5 14441617 14441984 -185188166 - L1MEc LINE L1 -4564 1832 1447 29 0 0 0 chr5 14442423 14442452 -185187698 + AT_rich Low_complexity Low_complexity 1 29 0 188 83 0 28 chr5 14442826 14442862 -185187288 + (TA)n Simple_repeat Simple_repeat 1 35 0 2200 177 114 0 chr5 14443372 14443812 -185186338 + LTR44 LTR ERV1 26 515 -4 444 227 70 39 chr5 14444639 14444767 -185185383 - MER20 DNA MER1_type -87 132 1 768 143 42 0 chr5 14445073 14445192 -185184958 + MER2 DNA MER2_type 1 124 -221 488 121 30 202 chr5 14445324 14445522 -185184628 + MER2 DNA MER2_type 125 288 -57 730 325 28 0 chr5 14445900 14446152 -185183998 - MIR SINE MIR -3 259 1 1085 183 27 5 chr5 14446514 14446733 -185183417 + MLT1C LTR MaLR 1 224 -243 18989 178 25 18 chr5 14498388 14500422 -185129728 - L1MA2 LINE L1 0 7723 5704 2087 118 0 16 chr5 14500422 14500728 -185129422 - AluSx SINE Alu -11 301 1 18989 178 25 18 chr5 14500728 14501747 -185128403 - L1MA2 LINE L1 -2019 5704 4693 2275 88 6 31 chr5 14501747 14502066 -185128084 - AluY SINE Alu 0 311 1 18989 178 25 18 chr5 14502066 14506670 -185123480 - L1MA2 LINE L1 -3030 4693 16 1571 270 56 51 chr5 14506888 14507510 -185122640 + MLT1E2 LTR MaLR 2 626 0 368 262 94 78 chr5 14507572 14507763 -185122387 - MIR SINE MIR -14 248 55 481 271 68 50 chr5 14507768 14508207 -185121943 - Charlie2a DNA MER1_type -486 2376 1930 337 211 61 9 chr5 14508254 14508368 -185121782 - Charlie2a DNA MER1_type -1236 1626 1507 452 349 68 24 chr5 14509278 14509527 -185120623 - MIR SINE MIR 0 262 3 1139 195 46 4 chr5 14510486 14510727 -185119423 + L1PA16 LINE L1 5913 6163 -3 26 64 0 0 chr5 14510776 14510823 -185119327 + AT_rich Low_complexity Low_complexity 1 47 0 1437 301 86 32 chr5 14510939 14511696 -185118454 + L2 LINE L2 20 817 -2497 690 294 84 4 chr5 14511699 14511961 -185118189 + L2 LINE L2 1413 1695 -1619 1049 222 77 14 chr5 14512506 14512803 -185117347 + L1ME1 LINE L1 5847 6162 -4 37 99 0 0 chr5 14512964 14513085 -185117065 + AT_rich Low_complexity Low_complexity 1 121 0 1691 174 65 11 chr5 14513202 14513558 -185116592 + THE1C LTR MaLR 1 375 0 9245 138 12 39 chr5 14513560 14515181 -185114969 + THE1C-int LTR MaLR 3 1580 0 1598 182 78 28 chr5 14515181 14515538 -185114612 + THE1C LTR MaLR 1 375 0 3886 247 43 22 chr5 14515545 14516907 -185113243 + L1M4 LINE L1 3906 5296 -850 630 234 22 0 chr5 14516889 14517073 -185113077 + L1MA7 LINE L1 6104 6291 0 * 293 176 0 0 chr5 14517120 14517171 -185112979 + L1MD3 LINE L1 7749 7799 -196 * 1183 204 40 30 chr5 14517165 14517194 -185112956 + L1MC2 LINE L1 6013 6040 -304 805 241 172 30 chr5 14517194 14517600 -185112550 + MER31B LTR ERV1 3 466 0 1183 204 40 30 chr5 14517600 14517874 -185112276 + L1MC2 LINE L1 6040 6319 -25 366 341 139 8 chr5 14517955 14518207 -185111943 - L2 LINE L2 -1004 2310 2026 335 103 21 98 chr5 14518443 14518637 -185111513 + (TA)n Simple_repeat Simple_repeat 1 179 0 639 87 0 77 chr5 14518684 14518879 -185111271 + (TA)n Simple_repeat Simple_repeat 1 180 0 654 75 0 80 chr5 14518919 14519106 -185111044 + (TA)n Simple_repeat Simple_repeat 1 172 0 726 72 0 77 chr5 14519122 14519317 -185110833 + (TA)n Simple_repeat Simple_repeat 1 180 0 1886 147 4 0 chr5 14519321 14519600 -185110550 - AluSx SINE Alu -32 280 1 241 319 35 26 chr5 14519611 14519727 -185110423 + MER89 LTR ERV1 405 521 -38 1283 244 90 17 chr5 14520914 14521381 -185108769 - MLT1D LTR MaLR 0 505 5 23 0 0 0 chr5 14521538 14521561 -185108589 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 14522350 14522380 -185107770 + AT_rich Low_complexity Low_complexity 1 30 0 413 276 0 0 chr5 14523310 14523408 -185106742 - MER5A DNA MER1_type -81 108 11 23 33 0 0 chr5 14523541 14523571 -185106579 + AT_rich Low_complexity Low_complexity 1 30 0 545 281 79 0 chr5 14524226 14524390 -185105760 + MIR SINE MIR 78 254 -8 1648 172 75 26 chr5 14524390 14524738 -185105412 - MLT1A1 LTR MaLR 0 365 1 646 249 150 43 chr5 14524911 14525164 -185104986 - MER110 LTR ERV1 -6 485 206 293 67 0 22 chr5 14525848 14525893 -185104257 + (TTCCC)n Simple_repeat Simple_repeat 5 48 0 326 195 22 28 chr5 14525901 14526081 -185104069 + CT-rich Low_complexity Low_complexity 1 179 0 307 60 40 0 chr5 14526079 14526129 -185104021 + (TCC)n Simple_repeat Simple_repeat 3 54 0 * 186 226 11 32 chr5 14526951 14527044 -185103106 + GA-rich Low_complexity Low_complexity 2 92 0 246 132 85 19 chr5 14527350 14527456 -185102694 + (TA)n Simple_repeat Simple_repeat 2 114 0 1387 141 60 56 chr5 14527467 14527751 -185102399 - THE1B LTR MaLR 0 364 80 620 51 26 0 chr5 14527893 14527971 -185102179 - THE1B LTR MaLR -284 80 1 340 208 0 62 chr5 14528023 14528119 -185102031 - L1MC4 LINE L1 -1339 6703 6614 48 32 0 0 chr5 14528295 14528357 -185101793 + AT_rich Low_complexity Low_complexity 1 62 0 863 181 80 43 chr5 14528723 14528911 -185101239 - MER20 DNA MER1_type -24 195 1 25 0 0 0 chr5 14529141 14529166 -185100984 + AT_rich Low_complexity Low_complexity 1 25 0 504 278 50 6 chr5 14529846 14530026 -185100124 + MER5A DNA MER1_type 2 189 0 375 23 0 0 chr5 14530926 14530970 -185099180 + (TG)n Simple_repeat Simple_repeat 2 45 0 2336 57 0 17 chr5 14531813 14532112 -185098038 - AluY SINE Alu -17 294 1 251 319 48 32 chr5 14532484 14532672 -185097478 - MARNA DNA Mariner -15 571 381 29 28 0 0 chr5 14532675 14532711 -185097439 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 14532807 14532828 -185097322 + AT_rich Low_complexity Low_complexity 1 21 0 269 109 22 0 chr5 14532871 14532917 -185097233 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 34 24 0 0 chr5 14532949 14532990 -185097160 + AT_rich Low_complexity Low_complexity 1 41 0 1703 147 3 20 chr5 14533247 14533553 -185096597 - AluJo SINE Alu -8 304 4 293 280 0 0 chr5 14534146 14534239 -185095911 + GA-rich Low_complexity Low_complexity 2 94 0 396 0 0 0 chr5 14535527 14535571 -185094579 + (CA)n Simple_repeat Simple_repeat 2 45 0 200 289 0 0 chr5 14535583 14535635 -185094515 + GA-rich Low_complexity Low_complexity 2 53 0 1332 222 40 0 chr5 14535636 14535960 -185094190 - MLT2C2 LTR ERVL -61 336 1 758 313 85 42 chr5 14535963 14536708 -185093442 + L2 LINE L2 2424 3192 -121 29 47 0 0 chr5 14537110 14537153 -185092997 + AT_rich Low_complexity Low_complexity 1 43 0 491 318 8 42 chr5 14537329 14537565 -185092585 + L1MDa LINE L1 113 340 -6200 1602 254 89 24 chr5 14537767 14538754 -185091396 + L1MDa LINE L1 990 5739 -801 1740 239 91 6 chr5 14538815 14539341 -185090809 + L1M2c LINE L1 1387 1957 -4832 631 224 39 54 chr5 14539348 14539607 -185090543 - MER69 DNA AcHobo -91 2435 2181 5156 158 2 36 chr5 14539620 14540638 -185089512 - L1PA15 LINE L1 -2 6163 5180 767 152 0 33 chr5 14540934 14541085 -185089065 + L1MA4 LINE L1 6151 6296 -4 29 28 0 0 chr5 14541132 14541168 -185088982 + AT_rich Low_complexity Low_complexity 1 36 0 7028 51 12 0 chr5 14542265 14543965 -185086185 + L1PA7 LINE L1 4437 6146 -8 1797 187 14 36 chr5 14544410 14544830 -185085320 + MLT1B LTR MaLR 1 390 0 3358 11 0 0 chr5 14545289 14545670 -185084480 - L1HS LINE L1 -1 6154 5774 16256 23 0 0 chr5 14545670 14547598 -185082552 + L1P LINE L1 2419 4346 -1800 2143 72 4 0 chr5 14548619 14548883 -185081267 - AluSq SINE Alu -26 287 23 221 224 35 47 chr5 14549850 14549935 -185080215 + GA-rich Low_complexity Low_complexity 2 85 0 787 355 61 28 chr5 14550049 14550542 -185079608 + LTR33 LTR ERVL 6 514 -7 23 0 0 0 chr5 14551339 14551362 -185078788 + AT_rich Low_complexity Low_complexity 1 23 0 490 254 66 75 chr5 14551536 14551749 -185078401 - MLT1H LTR MaLR -338 211 1 489 291 71 11 chr5 14552259 14552441 -185077709 - MLT1E1 LTR MaLR -83 571 379 387 258 210 0 chr5 14552523 14552690 -185077460 - MLT1E1 LTR MaLR -420 204 3 4410 89 8 2 chr5 14553340 14553948 -185076202 + LTR10E LTR ERV1 1 612 -21 1030 353 70 23 chr5 14554073 14555609 -185074541 + HERVL LTR ERVL 2061 3628 -2026 2796 131 9 9 chr5 14556153 14556611 -185073539 + L1PA16 LINE L1 5709 6166 0 396 364 96 29 chr5 14557794 14558137 -185072013 + L2 LINE L2 2942 3307 -6 21 0 0 0 chr5 14558782 14558803 -185071347 + AT_rich Low_complexity Low_complexity 1 21 0 342 67 0 0 chr5 14559460 14559505 -185070645 + (TG)n Simple_repeat Simple_repeat 1 45 0 282 95 0 0 chr5 14559507 14559549 -185070601 + (GA)n Simple_repeat Simple_repeat 2 43 0 17896 200 16 12 chr5 14559710 14566416 -185063734 + L1PA13 LINE L1 1 6746 -68 1003 215 45 4 chr5 14566403 14566649 -185063501 + L1M4 LINE L1 3514 3769 -2377 * 340 222 20 0 chr5 14566655 14566754 -185063396 + L1M4 LINE L1 4949 5049 -1097 2475 198 50 9 chr5 14568200 14568735 -185061415 - MER89 LTR ERV1 -2 557 1 617 347 125 15 chr5 14568775 14569184 -185060966 + L2 LINE L2 2812 3265 -48 487 289 65 18 chr5 14569967 14570306 -185059844 + L1MC/D LINE L1 3105 3459 -2687 391 279 58 0 chr5 14570371 14570543 -185059607 + L1MC/D LINE L1 3592 3773 -2373 1357 250 82 52 chr5 14570635 14571447 -185058703 + L1MC/D LINE L1 4229 5065 -1081 411 21 0 0 chr5 14571598 14571646 -185058504 + (TG)n Simple_repeat Simple_repeat 2 49 0 322 256 11 0 chr5 14571653 14571743 -185058407 + L1ME1 LINE L1 6070 6160 -6 230 346 8 8 chr5 14571750 14571877 -185058273 + L1MEc LINE L1 1624 1750 -4646 308 77 19 0 chr5 14572116 14572168 -185057982 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 1848 137 0 45 chr5 14572170 14572462 -185057688 - AluSx SINE Alu -33 279 1 505 304 60 54 chr5 14572491 14573083 -185057067 + L1MEc LINE L1 2047 2676 -3539 269 209 12 23 chr5 14573138 14573224 -185056926 + L1MC/D LINE L1 5265 5349 -797 487 322 51 30 chr5 14573280 14573575 -185056575 + L1MC/D LINE L1 5462 5762 -2046 337 239 31 8 chr5 14573575 14573705 -185056445 + (TA)n Simple_repeat Simple_repeat 1 133 0 248 299 72 66 chr5 14574961 14575128 -185055022 + L2 LINE L2 2797 2964 -350 342 67 0 0 chr5 14575315 14575360 -185054790 + (TG)n Simple_repeat Simple_repeat 2 46 0 207 268 127 0 chr5 14575361 14575432 -185054718 + L2 LINE L2 3193 3272 0 2669 184 39 35 chr5 14576354 14576946 -185053204 + L1MB1 LINE L1 5547 6140 -49 1739 210 71 5 chr5 14576950 14577149 -185053001 - MSTB LTR MaLR -4 422 237 270 0 0 0 chr5 14577149 14577179 -185052971 + (GA)n Simple_repeat Simple_repeat 1 30 0 1739 210 71 5 chr5 14577179 14577375 -185052775 - MSTB LTR MaLR -189 237 1 4191 179 35 5 chr5 14577375 14578136 -185052014 - MSTB-int LTR MaLR 0 1651 868 1754 159 159 5 chr5 14578245 14578615 -185051535 + MSTA LTR MaLR 1 427 -1 612 116 54 0 chr5 14578619 14578731 -185051419 - L1MA7 LINE L1 -2 6289 6172 2380 67 0 0 chr5 14579217 14579534 -185050616 - AluY SINE Alu 0 317 1 206 259 7 140 chr5 14580139 14580282 -185049868 + L2 LINE L2 3186 3309 -4 951 322 98 33 chr5 14580427 14580996 -185049154 + L1MA6 LINE L1 89 694 -6155 715 321 4 2 chr5 14581234 14581452 -185048698 + L1MA6 LINE L1 1335 1565 -5284 * 3764 235 99 6 chr5 14581449 14582729 -185047421 + L1MA6 LINE L1 2799 4202 -2646 760 73 0 18 chr5 14582733 14582842 -185047308 + LTR7 LTR ERV1 342 448 -2 15538 104 52 12 chr5 14582844 14585683 -185044467 + HERVH LTR ERV1 1 2995 -4718 944 140 7 0 chr5 14585662 14585812 -185044338 + HERVH LTR ERV1 3140 3290 -4423 * 1053 142 0 6 chr5 14585802 14585964 -185044186 + HERVH LTR ERV1 3492 3652 -4061 * 4607 62 5 8 chr5 14585956 14586566 -185043584 + HERVH LTR ERV1 7106 7713 0 1587 127 65 113 chr5 14586566 14586999 -185043151 + LTR7 LTR ERV1 1 412 -38 4611 205 69 52 chr5 14587040 14587848 -185042302 + L1MA6 LINE L1 4212 5005 -2015 1214 123 5 5 chr5 14587848 14588052 -185042098 - L1MA2 LINE L1 0 6304 6101 4611 205 69 52 chr5 14588052 14589948 -185040202 + L1MA6 LINE L1 5005 7020 0 3259 93 9 9 chr5 14590055 14590507 -185039643 - MLT2A2 LTR ERVL -1 452 1 25 31 0 0 chr5 14591158 14591190 -185038960 + AT_rich Low_complexity Low_complexity 1 32 0 2034 131 0 26 chr5 14592058 14592371 -185037779 + AluSg SINE Alu 1 305 -5 252 59 0 0 chr5 14592434 14592468 -185037682 + (TG)n Simple_repeat Simple_repeat 2 35 0 738 278 66 5 chr5 14592781 14592993 -185037157 + MIR SINE MIR 8 232 -30 21 57 0 0 chr5 14593018 14593053 -185037097 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 14593093 14593125 -185037025 + AT_rich Low_complexity Low_complexity 1 32 0 556 115 18 0 chr5 14593421 14593534 -185036616 + (TAGA)n Simple_repeat Simple_repeat 3 117 0 264 353 98 20 chr5 14593542 14593837 -185036313 + L2 LINE L2 2325 2642 -672 327 305 69 11 chr5 14593903 14594077 -185036073 - MIR SINE MIR -16 246 63 185 254 164 74 chr5 14594284 14594406 -185035744 + L2 LINE L2 3139 3271 -1 705 238 84 5 chr5 14595347 14595549 -185034601 - MLT1A1 LTR MaLR 0 365 148 3204 123 20 2 chr5 14595594 14596096 -185034054 - L1PA13 LINE L1 0 6163 5653 549 148 11 0 chr5 14596096 14596184 -185033966 + L1PA13 LINE L1 5529 5620 -543 2353 126 0 17 chr5 14596184 14596540 -185033610 + THE1C LTR MaLR 24 373 -2 14513 186 20 2 chr5 14596547 14599411 -185030739 - L1PA13 LINE L1 -845 5301 2386 561 283 26 7 chr5 14599415 14599567 -185030583 - MLT1A1 LTR MaLR -209 156 2 19615 168 14 10 chr5 14599751 14602419 -185027731 - L1PA11 LINE L1 0 6174 3472 2172 122 24 29 chr5 14602419 14602796 -185027354 + THE1C LTR MaLR 1 375 0 19615 168 14 10 chr5 14602796 14604772 -185025378 - L1PA11 LINE L1 -2702 3472 1507 295 146 18 18 chr5 14604833 14604888 -185025262 - THE1C-int LTR MaLR -1594 57 3 1859 137 76 25 chr5 14604890 14605247 -185024903 - THE1C LTR MaLR 0 375 1 1120 190 35 9 chr5 14605247 14605479 -185024671 - THE1C LTR MaLR -137 238 1 275 267 12 12 chr5 14605509 14605595 -185024555 + LTR37B LTR ERV1 222 307 -161 24 0 0 0 chr5 14606702 14606726 -185023424 + AT_rich Low_complexity Low_complexity 1 24 0 815 222 27 53 chr5 14607319 14607544 -185022606 - MER20 DNA MER1_type 0 219 1 243 214 0 0 chr5 14607737 14607779 -185022371 + MLT1K LTR MaLR 201 242 -346 1353 192 75 153 chr5 14608400 14608438 -185021712 - MER67D LTR ERV1 0 514 475 2372 124 14 8 chr5 14608438 14608800 -185021350 + THE1B LTR MaLR 1 364 0 1353 192 75 153 chr5 14608800 14609318 -185020832 - MER67D LTR ERV1 -39 475 1 21 0 0 0 chr5 14609391 14609412 -185020738 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 14609450 14609485 -185020665 + AT_rich Low_complexity Low_complexity 1 35 0 2569 91 14 0 chr5 14610563 14610913 -185019237 - THE1A LTR MaLR 0 355 1 6251 149 67 8 chr5 14610913 14611507 -185018643 - THE1A-int LTR MaLR 0 1651 1093 1973 138 0 33 chr5 14611507 14611811 -185018339 - AluSq SINE Alu -19 294 1 6251 149 67 8 chr5 14611811 14612641 -185017509 - THE1A-int LTR MaLR -558 1093 3 1871 116 8 0 chr5 14612643 14612910 -185017240 - THE1A LTR MaLR 0 355 87 2398 160 31 12 chr5 14612917 14613335 -185016815 + MSTB LTR MaLR 1 426 0 348 275 0 0 chr5 14613435 14613526 -185016624 - MER3 DNA MER1_type -111 98 8 2264 160 28 28 chr5 14614072 14614504 -185015646 + MSTB1 LTR MaLR 1 432 0 952 330 56 25 chr5 14614725 14615316 -185014834 - L2 LINE L2 -906 2408 1800 30 0 0 0 chr5 14615753 14615783 -185014367 + AT_rich Low_complexity Low_complexity 1 30 0 21 89 0 0 chr5 14616110 14616166 -185013984 + AT_rich Low_complexity Low_complexity 1 56 0 2819 217 133 60 chr5 14616405 14616921 -185013229 - L1MC3 LINE L1 -60 7725 7248 2682 48 6 0 chr5 14616921 14617254 -185012896 + L1PA4 LINE L1 5821 6155 0 2819 217 133 60 chr5 14617254 14617733 -185012417 - L1MC3 LINE L1 -537 7248 6657 2215 198 14 14 chr5 14617816 14618236 -185011914 - MSTC LTR MaLR -6 422 3 2970 282 44 31 chr5 14618237 14619376 -185010774 - L1MCb LINE L1 -4889 1156 3 1284 160 0 5 chr5 14620066 14620279 -185009871 - L1PA15 LINE L1 0 6165 5954 340 286 121 57 chr5 14621263 14621543 -185008607 - L2 LINE L2 -4 3309 3012 * 478 295 0 0 chr5 14621536 14621675 -185008475 - MIR SINE MIR -38 224 86 212 186 17 0 chr5 14621910 14621969 -185008181 + (TA)n Simple_repeat Simple_repeat 2 61 0 325 277 36 9 chr5 14622159 14622271 -185007879 - MIR SINE MIR 0 262 148 26 0 0 0 chr5 14622397 14622423 -185007727 + AT_rich Low_complexity Low_complexity 1 26 0 986 247 60 60 chr5 14623271 14623801 -185006349 - L1M4 LINE L1 -967 5179 4650 606 279 116 22 chr5 14623863 14624372 -185005778 - L1MEc LINE L1 -4153 2243 1687 12909 251 25 26 chr5 14624407 14626273 -185003877 + L1PB4 LINE L1 1 1868 -4939 2143 103 3 14 chr5 14626273 14626563 -185003587 - AluSx SINE Alu -12 300 14 12909 251 25 26 chr5 14626563 14627029 -185003121 + L1PB4 LINE L1 1868 2333 -4474 5573 28 0 0 chr5 14627029 14627678 -185002472 + L1PA3 LINE L1 5507 6155 0 12909 251 25 26 chr5 14627678 14627790 -185002360 + L1PB4 LINE L1 2333 2444 -4363 2380 157 23 23 chr5 14627790 14628146 -185002004 + MSTA LTR MaLR 1 359 -69 1681 189 18 0 chr5 14628146 14628432 -185001718 - AluJb SINE Alu -16 296 6 2380 157 23 23 chr5 14628432 14628503 -185001647 + MSTA LTR MaLR 358 428 0 12909 251 25 26 chr5 14628503 14629031 -185001119 + L1PB4 LINE L1 2444 2971 -3836 3056 139 12 10 chr5 14629031 14629543 -185000607 + MER75 DNA T2_type 1 513 -1 12909 251 25 26 chr5 14629543 14632833 -184997317 + L1PB4 LINE L1 2971 6807 0 25 75 0 0 chr5 14632837 14632890 -184997260 + AT_rich Low_complexity Low_complexity 1 53 0 450 350 69 41 chr5 14632995 14633105 -184997045 + L1ME3A LINE L1 5282 5387 -783 761 167 0 0 chr5 14633105 14633225 -184996925 + L1PB4 LINE L1 6022 6141 -15 450 350 69 41 chr5 14633225 14633755 -184996395 + L1ME3A LINE L1 5387 5940 -230 26 64 0 0 chr5 14633815 14633862 -184996288 + AT_rich Low_complexity Low_complexity 1 47 0 443 320 57 21 chr5 14634606 14634800 -184995350 + MIR SINE MIR 1 201 -61 1793 90 25 4 chr5 14635120 14635478 -184994672 + AluSc SINE Alu 35 397 0 212 231 15 31 chr5 14636073 14636138 -184994012 + (TATG)n Simple_repeat Simple_repeat 3 66 0 2377 114 0 11 chr5 14636704 14637055 -184993095 - THE1B LTR MaLR -17 347 1 1838 125 25 4 chr5 14637538 14637818 -184992332 - AluSg SINE Alu -24 286 1 25 51 0 0 chr5 14637818 14637857 -184992293 + AT_rich Low_complexity Low_complexity 1 39 0 265 130 0 56 chr5 14637862 14637916 -184992234 - AluSg/x SINE Alu -132 170 120 21 36 0 0 chr5 14637916 14637944 -184992206 + AT_rich Low_complexity Low_complexity 1 28 0 595 24 12 12 chr5 14639256 14639338 -184990812 + (TA)n Simple_repeat Simple_repeat 2 83 0 22 35 0 0 chr5 14639639 14639668 -184990482 + AT_rich Low_complexity Low_complexity 1 29 0 499 299 61 50 chr5 14639789 14640233 -184989917 + HAL1b LINE L1 149 597 -751 267 238 76 121 chr5 14640471 14640595 -184989555 - L2 LINE L2 -12 3301 3190 2043 162 12 0 chr5 14640595 14640928 -184989222 + MER1B DNA MER1_type 1 337 0 267 238 76 121 chr5 14640928 14641026 -184989124 - L2 LINE L2 -123 3190 3089 514 270 0 43 chr5 14641128 14641313 -184988837 - HERVL40 LTR ERVL -4256 1274 1098 1248 101 66 53 chr5 14641465 14641692 -184988458 - MER30 DNA MER1_type 0 230 1 1261 238 13 50 chr5 14641792 14642171 -184987979 - MLT1A1 LTR MaLR 0 365 1 237 330 27 9 chr5 14642246 14642358 -184987792 + LTR16C LTR ERVL 378 491 0 212 162 0 0 chr5 14642752 14642789 -184987361 + (CAA)n Simple_repeat Simple_repeat 2 38 0 683 236 17 28 chr5 14642824 14643002 -184987148 - FRAM SINE Alu 0 176 1 23 33 0 0 chr5 14643160 14643190 -184986960 + AT_rich Low_complexity Low_complexity 1 30 0 351 270 98 54 chr5 14647308 14647512 -184982638 - L1MC4 LINE L1 -1 8041 7829 594 211 34 91 chr5 14647554 14647763 -184982387 - L1ME2 LINE L1 -19 6145 5949 408 144 22 44 chr5 14647829 14647919 -184982231 - L1M1 LINE L1 -512 5793 5706 286 114 0 0 chr5 14647914 14647958 -184982192 + L1M2 LINE L1 5787 5830 -482 * 817 362 111 21 chr5 14647960 14648774 -184981376 + L2 LINE L2 2075 2961 -353 2186 117 3 7 chr5 14648933 14649240 -184980910 + AluSx SINE Alu 1 306 -6 360 269 19 10 chr5 14649277 14649381 -184980769 + MLT1J LTR MaLR 119 223 -288 300 200 0 0 chr5 14649477 14649547 -184980603 + (CA)n Simple_repeat Simple_repeat 2 71 0 287 339 79 18 chr5 14649660 14649825 -184980325 + L2 LINE L2 3139 3313 0 228 341 23 0 chr5 14649926 14650014 -184980136 - MER5B DNA MER1_type -82 96 7 339 96 0 0 chr5 14650682 14650734 -184979416 + (TA)n Simple_repeat Simple_repeat 1 52 0 385 168 30 30 chr5 14651700 14651801 -184978349 - MER53 DNA DNA -88 101 1 411 208 0 0 chr5 14651920 14651992 -184978158 + LTR16B LTR ERVL 393 464 0 351 271 98 20 chr5 14652710 14652962 -184977188 + L1ME1 LINE L1 5914 6141 -25 185 0 40 0 chr5 14653331 14653356 -184976794 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 336 303 70 13 chr5 14653616 14653817 -184976333 + L1MEc LINE L1 1010 1196 -5009 4617 68 45 0 chr5 14653817 14654418 -184975732 + MER11D LTR ERVK 270 897 0 7842 207 24 19 chr5 14654418 14656969 -184973181 - L1MA6 LINE L1 -328 5972 3338 574 200 9 0 chr5 14656970 14657075 -184973075 - U6 snRNA snRNA 0 107 2 342 306 110 23 chr5 14657084 14657303 -184972847 + L1MEc LINE L1 1220 1457 -4758 236 316 32 0 chr5 14657329 14657424 -184972726 + L1MC4 LINE L1 7573 7670 -372 1575 294 37 55 chr5 14658453 14659073 -184971077 + L1MA5 LINE L1 1 609 -6600 11889 236 35 36 chr5 14659424 14661043 -184969107 + L1MA5 LINE L1 1762 3381 -3827 1704 163 176 6 chr5 14661043 14661406 -184968744 + MSTA LTR MaLR 1 425 -3 11889 236 35 36 chr5 14661406 14662314 -184967836 + L1MA5 LINE L1 3381 4288 -2920 2160 176 31 12 chr5 14662314 14662734 -184967416 - MSTA LTR MaLR 0 428 1 11889 236 35 36 chr5 14662734 14664858 -184965292 + L1MA5 LINE L1 4288 6415 -793 836 88 64 0 chr5 14664858 14664983 -184965167 + MER85 DNA T2_type 1 133 -6 4905 163 30 4 chr5 14664984 14665907 -184964243 + L1MA5 LINE L1 6414 7360 -2 2492 253 40 12 chr5 14666720 14667440 -184962710 - L1ME1 LINE L1 -44 6122 5383 288 111 0 0 chr5 14667531 14667576 -184962574 + (GAAAA)n Simple_repeat Simple_repeat 2 46 0 1288 175 13 4 chr5 14667672 14667901 -184962249 + AluJb SINE Alu 82 312 0 450 324 92 33 chr5 14668103 14668438 -184961712 + L1M4 LINE L1 3392 3769 -2377 679 127 40 33 chr5 14668438 14668588 -184961562 + L1MA9 LINE L1 6162 6312 0 450 324 92 33 chr5 14668588 14668761 -184961389 + L1M4 LINE L1 3769 3930 -2216 763 234 139 50 chr5 14668905 14668952 -184961198 + LTR37B LTR ERV1 10 51 -417 1812 157 149 11 chr5 14668952 14669328 -184960822 - MSTA LTR MaLR 0 428 1 763 234 139 50 chr5 14669328 14669566 -184960584 + LTR37B LTR ERV1 51 346 -122 189 0 0 0 chr5 14669566 14669587 -184960563 + (TA)n Simple_repeat Simple_repeat 2 22 0 763 234 139 50 chr5 14669587 14669718 -184960432 + LTR37B LTR ERV1 346 464 -4 24 32 0 0 chr5 14669833 14669864 -184960286 + AT_rich Low_complexity Low_complexity 1 31 0 421 226 59 58 chr5 14670715 14670941 -184959209 + MER5C DNA MER1_type 6 321 -3 1852 206 72 28 chr5 14672832 14673292 -184956858 - L1MB7 LINE L1 0 6184 5705 1614 175 22 3 chr5 14673292 14673606 -184956544 + L1MB1 LINE L1 5848 6167 -1 243 0 0 0 chr5 14673672 14673699 -184956451 + (T)n Simple_repeat Simple_repeat 1 27 0 27 0 0 0 chr5 14673934 14673961 -184956189 + AT_rich Low_complexity Low_complexity 1 27 0 26 30 0 0 chr5 14675419 14675452 -184954698 + AT_rich Low_complexity Low_complexity 1 33 0 213 402 0 0 chr5 14675823 14675905 -184954245 + MIR SINE MIR 32 113 -149 311 307 150 38 chr5 14676480 14676773 -184953377 + L2 LINE L2 2827 3152 -161 288 307 59 10 chr5 14676800 14676901 -184953249 - MIR SINE MIR -125 137 32 244 349 148 10 chr5 14677167 14677376 -184952774 + MIR SINE MIR 18 255 -7 603 187 2 15 chr5 14677421 14677556 -184952594 - L1MD3 LINE L1 -1 7980 7666 527 266 68 21 chr5 14677545 14677737 -184952413 - L1MC4 LINE L1 -1226 6816 6616 * 23 33 0 0 chr5 14677859 14677889 -184952261 + AT_rich Low_complexity Low_complexity 1 30 0 3619 146 74 9 chr5 14677971 14678661 -184951489 + L1MA6 LINE L1 5564 6298 -2 1528 167 6 77 chr5 14678707 14679030 -184951120 - AluJo SINE Alu -12 300 1 4116 98 48 32 chr5 14679183 14679836 -184950314 - L1PA13 LINE L1 -4 6159 5497 4008 227 50 2 chr5 14679836 14680638 -184949512 - L1PA13 LINE L1 -5923 864 25 1755 162 66 41 chr5 14680757 14681121 -184949029 + Tigger2 DNA MER2_type 2334 2706 -12 3563 259 89 11 chr5 14681304 14682793 -184947357 + L1M4b LINE L1 1098 2693 -4874 436 258 0 0 chr5 14682796 14682889 -184947261 + MLT1A2 LTR MaLR 1 93 -281 228 94 0 0 chr5 14682960 14682992 -184947158 + LTR9 LTR ERV1 581 612 0 318 175 111 0 chr5 14683041 14683104 -184947046 + MLT1A2 LTR MaLR 293 362 -12 1370 244 40 93 chr5 14683143 14683786 -184946364 + LTR9 LTR ERV1 4 612 0 439 293 6 12 chr5 14683855 14684019 -184946131 + L1M4b LINE L1 2850 3012 -4553 2228 154 21 14 chr5 14684252 14684673 -184945477 + L1MA3 LINE L1 5882 6305 0 337 254 55 26 chr5 14684769 14685057 -184945093 + L1M4b LINE L1 3364 3625 -3942 375 284 69 0 chr5 14685088 14685204 -184944946 + L1M4b LINE L1 4567 4690 -2875 723 217 60 9 chr5 14685215 14685432 -184944718 + L1MB8 LINE L1 3657 3884 -3681 * 2122 257 26 15 chr5 14685427 14686175 -184943975 + L1MB8 LINE L1 4527 5283 -2282 1550 181 19 161 chr5 14686176 14686617 -184943533 + LTR60 LTR ERV1 1 340 -246 2069 164 22 11 chr5 14686617 14686988 -184943162 - THE1C LTR MaLR 0 375 1 1550 181 19 161 chr5 14686988 14687130 -184943020 + LTR60 LTR ERV1 340 501 -85 853 175 86 129 chr5 14687009 14687335 -184942815 + TAR1 Satellite telomeric 2 313 -1798 * 4055 212 54 73 chr5 14687335 14687469 -184942681 + L1MB8 LINE L1 5282 5417 -2186 2228 124 48 20 chr5 14687469 14687823 -184942327 + THE1B LTR MaLR 1 364 0 4055 212 54 73 chr5 14687823 14687935 -184942215 + L1MB8 LINE L1 5417 5530 -2073 3101 92 0 22 chr5 14687935 14688392 -184941758 - L1PA7 LINE L1 -5 6149 5703 4055 212 54 73 chr5 14688392 14689121 -184941029 + L1MB8 LINE L1 5530 6271 -1332 2214 74 0 3 chr5 14689121 14689427 -184940723 + AluY SINE Alu 2 306 0 4055 212 54 73 chr5 14689427 14689643 -184940507 + L1MB8 LINE L1 6271 6490 -1113 3807 111 45 2 chr5 14689643 14690220 -184939930 - LTR43 LTR ERV1 0 602 1 4055 212 54 73 chr5 14690220 14690514 -184939636 + L1MB8 LINE L1 6490 6788 -815 4317 110 16 6 chr5 14690514 14691152 -184938998 + LTR9B LTR ERV1 1 644 0 4055 212 54 73 chr5 14691152 14691613 -184938537 + L1MB8 LINE L1 6788 7206 -397 2243 145 78 15 chr5 14691615 14691818 -184938332 + LTR59 LTR ERV1 1 190 -407 4461 135 54 4 chr5 14691818 14692560 -184937590 - MER4E LTR ERV1 0 779 1 2243 145 78 15 chr5 14692560 14692764 -184937386 + LTR59 LTR ERV1 190 434 -163 6231 146 1 24 chr5 14692782 14693168 -184936982 - L1PB1 LINE L1 -2 6149 5756 234 0 0 0 chr5 14693168 14693194 -184936956 + (GA)n Simple_repeat Simple_repeat 2 27 0 6231 146 1 24 chr5 14693194 14694193 -184935957 - L1PB1 LINE L1 -395 5756 4800 2140 120 0 0 chr5 14694193 14694493 -184935657 - AluSg SINE Alu -10 300 1 6231 146 1 24 chr5 14694493 14694597 -184935553 - L1PB1 LINE L1 -1351 4800 4695 895 179 0 35 chr5 14694597 14694770 -184935380 + LTR59 LTR ERV1 426 592 -5 1250 223 67 32 chr5 14694773 14695146 -184935004 + L1MB8 LINE L1 7211 7596 -1 190 209 70 116 chr5 14695699 14695785 -184934365 - MIR SINE MIR -116 146 65 277 349 83 18 chr5 14697557 14697786 -184932364 - LTR16A1 LTR ERVL 0 457 214 349 260 144 19 chr5 14697983 14698165 -184931985 - MLT1H1 LTR MaLR -305 250 71 629 333 15 26 chr5 14698242 14698506 -184931644 - HERVL40 LTR ERVL -4017 1513 1253 1280 297 59 34 chr5 14698579 14699084 -184931066 - HERVL40 LTR ERVL -4415 1115 598 2249 85 0 19 chr5 14699112 14699430 -184930720 - AluSx SINE Alu 0 312 1 923 227 82 32 chr5 14699610 14699945 -184930205 + MSTD LTR MaLR 8 396 0 611 275 22 17 chr5 14699981 14700159 -184929991 - MLT1J2 LTR MaLR -251 199 21 21 0 0 0 chr5 14701234 14701255 -184928895 + AT_rich Low_complexity Low_complexity 1 21 0 2319 67 0 0 chr5 14701342 14701651 -184928499 - AluSg SINE Alu 0 309 1 27 29 0 0 chr5 14702265 14702299 -184927851 + AT_rich Low_complexity Low_complexity 1 34 0 27 73 0 0 chr5 14702874 14702929 -184927221 + AT_rich Low_complexity Low_complexity 1 55 0 2203 112 0 0 chr5 14705067 14705363 -184924787 - AluSg SINE Alu -14 296 1 1661 171 61 25 chr5 14705856 14706218 -184923932 + THE1C LTR MaLR 1 375 0 9565 138 7 33 chr5 14706221 14707807 -184922343 + THE1C-int LTR MaLR 4 1547 -33 1991 102 3 31 chr5 14708070 14708364 -184921786 - AluSp SINE Alu -8 305 20 1358 198 7 4 chr5 14708645 14708918 -184921232 - AluJo SINE Alu -14 298 25 35 41 0 0 chr5 14709290 14709339 -184920811 + AT_rich Low_complexity Low_complexity 1 49 0 2532 48 0 7 chr5 14710781 14711091 -184919059 - AluY SINE Alu 0 311 4 399 281 72 60 chr5 14711092 14711327 -184918823 - L1MDb LINE L1 -5082 1862 1625 271 300 0 0 chr5 14711811 14711881 -184918269 + (TG)n Simple_repeat Simple_repeat 2 71 0 6669 149 19 33 chr5 14712070 14712941 -184917209 - Tigger3b DNA MER2_type -1833 1195 344 2048 123 3 10 chr5 14712941 14713242 -184916908 - AluSx SINE Alu -9 303 5 6669 149 19 33 chr5 14713242 14713581 -184916569 - Tigger3b DNA MER2_type -2684 344 2 2273 53 0 7 chr5 14713944 14714227 -184915923 + AluY SINE Alu 3 283 -28 21 36 0 0 chr5 14715116 14715144 -184915006 + AT_rich Low_complexity Low_complexity 1 28 0 398 313 53 60 chr5 14715554 14715581 -184914569 + L2 LINE L2 1205 1231 -2083 2036 124 59 34 chr5 14715581 14715936 -184914214 - THE1B LTR MaLR 0 364 1 398 313 53 60 chr5 14715936 14716208 -184913942 + L2 LINE L2 1231 1502 -1812 566 217 39 34 chr5 14716209 14716388 -184913762 + MER33 DNA MER1_type 1 166 -93 1027 166 5 0 chr5 14716389 14716576 -184913574 + L1M2 LINE L1 2499 2686 -4163 528 204 34 54 chr5 14716576 14716723 -184913427 + MER33 DNA MER1_type 216 359 -4 2497 315 75 51 chr5 14716733 14718239 -184911911 + L2 LINE L2 1515 3054 -259 204 40 0 0 chr5 14718761 14718786 -184911364 + (A)n Simple_repeat Simple_repeat 1 25 0 210 71 0 0 chr5 14718844 14718872 -184911278 + (TTA)n Simple_repeat Simple_repeat 2 29 0 787 200 7 7 chr5 14718874 14719019 -184911131 - FRAM SINE Alu -30 146 2 22 35 0 0 chr5 14720492 14720521 -184909629 + AT_rich Low_complexity Low_complexity 1 29 0 1108 251 101 79 chr5 14721210 14721499 -184908651 - L1MDb LINE L1 -5017 1406 1125 2243 82 0 16 chr5 14721499 14721815 -184908335 - AluY SINE Alu 0 311 1 1108 251 101 79 chr5 14721815 14722131 -184908019 - L1MDb LINE L1 -5298 1125 788 24 0 0 0 chr5 14723822 14723846 -184906304 + AT_rich Low_complexity Low_complexity 1 24 0 922 186 16 5 chr5 14725350 14725538 -184904612 - Tigger4(Zombi) DNA MER2_type -2 2729 2540 * 1440 159 44 30 chr5 14725526 14725796 -184904354 - MER7A DNA MER2_type -64 282 11 679 343 56 75 chr5 14726014 14726723 -184903427 - L1MEd LINE L1 -5032 1087 392 409 106 0 15 chr5 14727400 14727466 -184902684 + L1PB4 LINE L1 6080 6144 -12 1140 232 89 35 chr5 14727771 14728141 -184902009 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr5 14729480 14729502 -184900648 + AT_rich Low_complexity Low_complexity 1 22 0 450 79 0 0 chr5 14729739 14729802 -184900348 + (TG)n Simple_repeat Simple_repeat 1 63 0 326 320 10 0 chr5 14731175 14731278 -184898872 + GA-rich Low_complexity Low_complexity 2 105 0 201 348 82 27 chr5 14731309 14731493 -184898657 + MIR SINE MIR 22 215 -47 1049 220 102 34 chr5 14731574 14731869 -184898281 - MLT1A1 LTR MaLR 0 365 51 27 81 0 0 chr5 14731939 14732001 -184898149 + AT_rich Low_complexity Low_complexity 1 62 0 289 313 0 24 chr5 14732670 14732753 -184897397 - L1MEd LINE L1 -5467 652 572 284 258 30 91 chr5 14733441 14733573 -184896577 - L2 LINE L2 -1 3271 3148 210 344 43 74 chr5 14733632 14733668 -184896482 - MIR3 SINE MIR -18 190 154 2116 91 0 0 chr5 14733668 14733955 -184896195 + L1PA5 LINE L1 5867 6153 -1 210 344 43 74 chr5 14733955 14734081 -184896069 - MIR3 SINE MIR -54 154 33 34 0 0 0 chr5 14734234 14734268 -184895882 + AT_rich Low_complexity Low_complexity 1 34 0 481 293 223 4 chr5 14736654 14736927 -184893223 - MLT1H LTR MaLR -16 533 201 738 346 74 0 chr5 14736982 14737291 -184892859 - MLT2E LTR ERVL -258 370 39 266 289 91 3 chr5 14737389 14737535 -184892615 - L1ME2 LINE L1 -49 6113 5967 1581 268 96 19 chr5 14737563 14738483 -184891667 - L1MD2 LINE L1 -462 5897 4899 4025 161 1 1 chr5 14738568 14739239 -184890911 - L1PA15 LINE L1 -3 7600 6930 9935 218 49 14 chr5 14739262 14741351 -184888799 - L1PA15 LINE L1 -913 6671 4473 1185 116 83 0 chr5 14741351 14741532 -184888618 + MER107 DNA MER1_type 1 196 -1 9935 218 49 14 chr5 14741532 14742012 -184888138 - L1PA15 LINE L1 -3111 4473 4011 4639 235 31 10 chr5 14742013 14743787 -184886363 - L1PA15 LINE L1 -3749 3835 2022 471 326 39 26 chr5 14745124 14745434 -184884716 - L1PA15 LINE L1 -7261 320 7 1516 261 130 36 chr5 14745455 14746844 -184883306 - L1MCb LINE L1 -4491 2073 570 647 279 116 70 chr5 14747049 14747464 -184882686 - L1MCb LINE L1 -5673 372 65 24 32 0 0 chr5 14747486 14747517 -184882633 + AT_rich Low_complexity Low_complexity 1 31 0 2170 119 0 0 chr5 14747700 14748003 -184882147 - AluY SINE Alu -8 303 1 1791 203 48 8 chr5 14748742 14749117 -184881033 + MLT1B LTR MaLR 1 390 0 495 325 69 12 chr5 14750327 14750647 -184879503 - MER46C DNA MER2_type 0 338 1 452 308 99 38 chr5 14750782 14751629 -184878521 - HAL1 LINE L1 -732 1775 877 246 213 16 0 chr5 14752441 14752502 -184877648 - MLT1E3 LTR MaLR 0 624 563 2055 255 74 12 chr5 14752512 14753077 -184877073 - MLT1E3 LTR MaLR -24 600 1 608 211 164 18 chr5 14753217 14753510 -184876640 + MLT1C LTR MaLR 6 352 -38 1238 239 4 0 chr5 14753902 14754170 -184875980 - MLT2D LTR ERVL -141 273 5 2225 104 0 7 chr5 14754174 14754483 -184875667 + AluSc SINE Alu 1 307 -2 239 250 47 0 chr5 14754713 14754777 -184875373 - MIR3 SINE MIR -19 189 123 25 105 0 0 chr5 14755279 14755374 -184874776 + AT_rich Low_complexity Low_complexity 1 95 0 2360 97 0 3 chr5 14755452 14755763 -184874387 - AluSg SINE Alu 0 310 1 22 56 0 0 chr5 14755949 14755985 -184874165 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 14756065 14756094 -184874056 + AT_rich Low_complexity Low_complexity 1 29 0 1656 259 111 8 chr5 14756453 14756474 -184873676 + L1MD2 LINE L1 3796 3813 -2333 5028 52 0 0 chr5 14756474 14757089 -184873061 + L1PA5 LINE L1 5534 6148 -6 1656 259 111 8 chr5 14757089 14757689 -184872461 + L1MD2 LINE L1 3813 4481 -1665 2581 267 98 16 chr5 14757765 14758527 -184871623 + L1MD2 LINE L1 4641 5339 -1020 213 39 0 0 chr5 14758527 14758553 -184871597 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 2581 267 98 16 chr5 14758553 14759371 -184870779 + L1MD2 LINE L1 5339 6348 -11 2199 190 13 43 chr5 14759539 14759761 -184870389 + MER74C LTR ERVL 11 213 -247 1869 181 39 31 chr5 14759761 14760148 -184870002 + MLT1B LTR MaLR 1 390 0 2199 190 13 43 chr5 14760148 14760389 -184869761 + MER74C LTR ERVL 213 460 0 278 266 58 22 chr5 14760409 14760548 -184869602 + L1MDa LINE L1 2311 2454 -4086 836 271 124 32 chr5 14760604 14761232 -184868918 + L1MDa LINE L1 2607 3292 -3248 1491 224 94 4 chr5 14761252 14761890 -184868260 - L1MCa LINE L1 -3947 2479 1867 374 177 149 10 chr5 14761893 14762070 -184868080 - MER67D LTR ERV1 0 514 236 1484 237 66 20 chr5 14762073 14762570 -184867580 - L1MCa LINE L1 -4758 1668 1149 242 207 17 0 chr5 14762575 14762633 -184867517 + L1ME2 LINE L1 6079 6137 -27 1437 176 3 76 chr5 14762651 14762940 -184867210 + AluJb SINE Alu 1 268 -44 1556 103 5 5 chr5 14762940 14763154 -184866996 + AluSg/x SINE Alu 95 308 -4 1521 216 78 8 chr5 14764245 14764721 -184865429 + L1MDa LINE L1 3386 3894 -2646 760 73 0 18 chr5 14764725 14764834 -184865316 + LTR7 LTR ERV1 342 448 -2 18060 105 62 12 chr5 14764836 14767689 -184862461 + HERVH LTR ERV1 1 2995 -4718 944 140 7 0 chr5 14767668 14767818 -184862332 + HERVH LTR ERV1 3140 3290 -4423 * 1053 142 0 6 chr5 14767808 14767970 -184862180 + HERVH LTR ERV1 3492 3652 -4061 * 4607 62 5 8 chr5 14767962 14768572 -184861578 + HERVH LTR ERV1 7106 7713 0 1570 129 65 113 chr5 14768572 14769005 -184861145 + LTR7 LTR ERV1 1 412 -38 252 0 0 0 chr5 14769005 14769033 -184861117 + (A)n Simple_repeat Simple_repeat 1 28 0 4805 217 87 51 chr5 14769056 14769864 -184860286 + L1MA6 LINE L1 3904 4682 -2030 1214 123 5 5 chr5 14769864 14770068 -184860082 - L1MA2 LINE L1 0 6304 6101 4805 217 87 51 chr5 14770068 14771964 -184858186 + L1MA6 LINE L1 4682 6712 0 3259 93 9 9 chr5 14772071 14772523 -184857627 - MLT2A2 LTR ERVL -1 452 1 25 31 0 0 chr5 14773174 14773206 -184856944 + AT_rich Low_complexity Low_complexity 1 32 0 2034 131 0 26 chr5 14774074 14774387 -184855763 + AluSg SINE Alu 1 305 -5 252 59 0 0 chr5 14774450 14774484 -184855666 + (TG)n Simple_repeat Simple_repeat 2 35 0 738 278 66 5 chr5 14774797 14775009 -184855141 + MIR SINE MIR 8 232 -30 21 57 0 0 chr5 14775034 14775069 -184855081 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 14775109 14775141 -184855009 + AT_rich Low_complexity Low_complexity 1 32 0 591 106 32 0 chr5 14775437 14775560 -184854590 + (TAGA)n Simple_repeat Simple_repeat 3 129 0 264 353 98 20 chr5 14775568 14775863 -184854287 + L2 LINE L2 2325 2642 -672 327 305 69 11 chr5 14775929 14776103 -184854047 - MIR SINE MIR -16 246 63 185 254 164 74 chr5 14776310 14776432 -184853718 + L2 LINE L2 3139 3271 -1 712 236 79 5 chr5 14777373 14777576 -184852574 - MLT1A1 LTR MaLR 0 365 148 3204 123 20 2 chr5 14777621 14778123 -184852027 - L1PA13 LINE L1 0 6163 5653 549 148 11 0 chr5 14778123 14778211 -184851939 + L1PA13 LINE L1 5529 5620 -548 2278 126 0 22 chr5 14778211 14778569 -184851581 + THE1C LTR MaLR 24 373 -2 14506 186 20 2 chr5 14778576 14781440 -184848710 - L1PA13 LINE L1 -845 5301 2386 561 283 26 7 chr5 14781444 14781596 -184848554 - MLT1A1 LTR MaLR -209 156 2 19555 166 14 14 chr5 14781780 14784448 -184845702 - L1PA11 LINE L1 0 6825 4140 2172 122 24 29 chr5 14784448 14784825 -184845325 + THE1C LTR MaLR 1 375 0 19555 166 14 14 chr5 14784825 14786835 -184843315 - L1PA11 LINE L1 -2685 4140 2133 298 183 17 17 chr5 14786877 14786937 -184843213 - THE1C-int LTR MaLR -1589 62 3 1859 137 76 25 chr5 14786939 14787296 -184842854 - THE1C LTR MaLR 0 375 1 1094 194 35 9 chr5 14787296 14787528 -184842622 - THE1C LTR MaLR -137 238 1 280 267 12 12 chr5 14787558 14787644 -184842506 + LTR37B LTR ERV1 222 307 -161 24 0 0 0 chr5 14788751 14788775 -184841375 + AT_rich Low_complexity Low_complexity 1 24 0 808 222 27 53 chr5 14789368 14789593 -184840557 - MER20 DNA MER1_type 0 219 1 244 214 0 0 chr5 14789786 14789828 -184840322 + MLT1K LTR MaLR 201 242 -346 1375 192 75 153 chr5 14790449 14790487 -184839663 - MER67D LTR ERV1 0 514 475 2358 124 14 8 chr5 14790487 14790849 -184839301 + THE1B LTR MaLR 1 364 0 1375 192 75 153 chr5 14790849 14791367 -184838783 - MER67D LTR ERV1 -39 475 1 21 0 0 0 chr5 14791440 14791461 -184838689 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 14791499 14791534 -184838616 + AT_rich Low_complexity Low_complexity 1 35 0 2551 91 14 0 chr5 14792612 14792962 -184837188 - THE1A LTR MaLR 0 355 1 6215 151 65 7 chr5 14792962 14793556 -184836594 - THE1A-int LTR MaLR 0 1651 1093 1968 135 0 33 chr5 14793556 14793860 -184836290 - AluSq SINE Alu -19 294 1 6215 151 65 7 chr5 14793860 14794690 -184835460 - THE1A-int LTR MaLR -558 1093 3 1876 116 8 0 chr5 14794692 14794960 -184835190 - THE1A LTR MaLR 0 355 86 2386 158 31 12 chr5 14794966 14795384 -184834766 + MSTB LTR MaLR 1 426 0 352 275 0 0 chr5 14795484 14795575 -184834575 - MER3 DNA MER1_type -111 98 8 2231 160 28 28 chr5 14796121 14796553 -184833597 + MSTB1 LTR MaLR 1 432 0 938 338 51 20 chr5 14796774 14797365 -184832785 - L2 LINE L2 -906 2408 1800 30 0 0 0 chr5 14797803 14797833 -184832317 + AT_rich Low_complexity Low_complexity 1 30 0 21 89 0 0 chr5 14798160 14798216 -184831934 + AT_rich Low_complexity Low_complexity 1 56 0 2878 217 133 60 chr5 14798455 14798971 -184831179 - L1MC3 LINE L1 -60 7725 7248 2668 48 6 0 chr5 14798971 14799304 -184830846 + L1PA4 LINE L1 5821 6155 0 2878 217 133 60 chr5 14799304 14799783 -184830367 - L1MC3 LINE L1 -537 7248 6657 2220 198 14 14 chr5 14799866 14800286 -184829864 - MSTC LTR MaLR -6 422 3 2989 283 43 31 chr5 14800287 14801427 -184828723 - L1MCb LINE L1 -4889 1156 3 1280 160 0 5 chr5 14802117 14802330 -184827820 - L1PA15 LINE L1 0 6165 5954 352 286 121 57 chr5 14803314 14803594 -184826556 - L2 LINE L2 -4 3309 3012 * 490 295 0 0 chr5 14803587 14803726 -184826424 - MIR SINE MIR -38 224 86 212 186 17 0 chr5 14803961 14804020 -184826130 + (TA)n Simple_repeat Simple_repeat 2 61 0 329 277 36 9 chr5 14804210 14804322 -184825828 - MIR SINE MIR 0 262 148 26 0 0 0 chr5 14804448 14804474 -184825676 + AT_rich Low_complexity Low_complexity 1 26 0 1045 246 62 60 chr5 14805320 14805849 -184824301 - L1M4 LINE L1 -967 5179 4650 665 279 116 22 chr5 14805911 14806420 -184823730 - L1MEc LINE L1 -4153 2243 1687 13215 252 24 26 chr5 14806455 14808321 -184821829 + L1PB4 LINE L1 1 1868 -4939 2120 100 3 14 chr5 14808321 14808610 -184821540 - AluSx SINE Alu -13 299 14 13215 252 24 26 chr5 14808610 14809076 -184821074 + L1PB4 LINE L1 1868 2333 -4474 5550 28 0 0 chr5 14809076 14809725 -184820425 + L1PA3 LINE L1 5507 6155 0 13215 252 24 26 chr5 14809725 14809837 -184820313 + L1PB4 LINE L1 2333 2444 -4363 2357 157 23 23 chr5 14809837 14810193 -184819957 + MSTA LTR MaLR 1 359 -69 1629 188 17 3 chr5 14810193 14810480 -184819670 - AluJb SINE Alu -16 296 6 2357 157 23 23 chr5 14810480 14810551 -184819599 + MSTA LTR MaLR 358 428 0 13215 252 24 26 chr5 14810551 14811079 -184819071 + L1PB4 LINE L1 2444 2971 -3836 3069 139 12 10 chr5 14811079 14811591 -184818559 + MER75 DNA T2_type 1 513 -1 13215 252 24 26 chr5 14811591 14814881 -184815269 + L1PB4 LINE L1 2971 6807 0 25 75 0 0 chr5 14814885 14814938 -184815212 + AT_rich Low_complexity Low_complexity 1 53 0 439 349 68 42 chr5 14815043 14815153 -184814997 + L1ME3A LINE L1 5282 5388 -782 761 167 0 0 chr5 14815153 14815273 -184814877 + L1PB4 LINE L1 6022 6141 -15 439 349 68 42 chr5 14815273 14815804 -184814346 + L1ME3A LINE L1 5388 5940 -230 26 64 0 0 chr5 14815864 14815911 -184814239 + AT_rich Low_complexity Low_complexity 1 47 0 445 341 55 18 chr5 14816655 14816875 -184813275 + MIR SINE MIR 1 228 -34 1793 90 25 4 chr5 14817169 14817520 -184812630 + AluSc SINE Alu 35 390 0 212 231 15 31 chr5 14818108 14818173 -184811977 + (TATG)n Simple_repeat Simple_repeat 3 66 0 2377 114 0 11 chr5 14818739 14819090 -184811060 - THE1B LTR MaLR -17 347 1 1838 125 25 4 chr5 14819573 14819853 -184810297 - AluSg SINE Alu -24 286 1 25 51 0 0 chr5 14819853 14819892 -184810258 + AT_rich Low_complexity Low_complexity 1 39 0 265 130 0 56 chr5 14819897 14819951 -184810199 - AluSg/x SINE Alu -132 170 120 21 36 0 0 chr5 14819951 14819979 -184810171 + AT_rich Low_complexity Low_complexity 1 28 0 490 40 14 14 chr5 14821291 14821365 -184808785 + (TA)n Simple_repeat Simple_repeat 2 75 0 499 299 61 50 chr5 14821816 14822260 -184807890 + HAL1b LINE L1 149 597 -751 267 238 76 121 chr5 14822498 14822622 -184807528 - L2 LINE L2 -12 3301 3190 2043 162 12 0 chr5 14822622 14822955 -184807195 + MER1B DNA MER1_type 1 337 0 267 238 76 121 chr5 14822955 14823053 -184807097 - L2 LINE L2 -123 3190 3089 514 270 0 43 chr5 14823155 14823340 -184806810 - HERVL40 LTR ERVL -4256 1274 1098 1226 105 61 53 chr5 14823492 14823720 -184806430 - MER30 DNA MER1_type 0 230 1 1271 235 16 50 chr5 14823820 14824198 -184805952 - MLT1A1 LTR MaLR 0 365 1 237 330 27 9 chr5 14824273 14824385 -184805765 + LTR16C LTR ERVL 378 491 0 212 162 0 0 chr5 14824779 14824816 -184805334 + (CAA)n Simple_repeat Simple_repeat 2 38 0 683 236 17 28 chr5 14824851 14825029 -184805121 - FRAM SINE Alu 0 176 1 23 33 0 0 chr5 14825187 14825217 -184804933 + AT_rich Low_complexity Low_complexity 1 30 0 32 57 0 0 chr5 14827087 14827140 -184803010 + AT_rich Low_complexity Low_complexity 1 53 0 1799 168 3 0 chr5 14827576 14827861 -184802289 + AluJb SINE Alu 6 291 -21 24 0 0 0 chr5 14828020 14828044 -184802106 + AT_rich Low_complexity Low_complexity 1 24 0 2261 60 42 0 chr5 14828319 14828604 -184801546 + AluY SINE Alu 1 297 -14 27 49 0 0 chr5 14828816 14828857 -184801293 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 14829708 14829731 -184800419 + AT_rich Low_complexity Low_complexity 1 23 0 2213 105 3 0 chr5 14830050 14830355 -184799795 + AluSg1 SINE Alu 1 306 -3 30 0 0 0 chr5 14830645 14830675 -184799475 + AT_rich Low_complexity Low_complexity 1 30 0 2111 124 0 3 chr5 14830832 14831138 -184799012 - AluSx SINE Alu -7 305 1 2592 192 98 32 chr5 14831969 14832663 -184797487 - MER45R DNA AcHobo -1 1580 828 2084 187 57 9 chr5 14832663 14833069 -184797081 - LOR1b LTR ERV1 -2 459 29 257 50 0 25 chr5 14833069 14833109 -184797041 + (CAA)n Simple_repeat Simple_repeat 1 39 0 2084 187 57 9 chr5 14833109 14833140 -184797010 - LOR1b LTR ERV1 -432 29 1 2592 192 98 32 chr5 14833140 14833220 -184796930 - MER45R DNA AcHobo -753 828 755 22 0 0 0 chr5 14833408 14833430 -184796720 + AT_rich Low_complexity Low_complexity 1 22 0 1308 207 17 20 chr5 14833446 14833741 -184796409 - AluJo SINE Alu -18 294 1 296 346 0 44 chr5 14834418 14834554 -184795596 + LTR33 LTR ERVL 17 146 -375 2792 235 88 17 chr5 14834672 14834748 -184795402 - L1M4 LINE L1 -869 5277 5208 1684 181 25 0 chr5 14834748 14835062 -184795088 - L1PA16 LINE L1 0 6166 5845 2792 235 88 17 chr5 14835062 14835968 -184794182 - L1M4 LINE L1 -938 5208 4226 186 133 0 0 chr5 14835995 14836025 -184794125 + (TATG)n Simple_repeat Simple_repeat 1 30 0 241 221 0 35 chr5 14836494 14836580 -184793570 - L1ME3A LINE L1 -194 5976 5894 1986 142 64 6 chr5 14836656 14837000 -184793150 - THE1B LTR MaLR 0 364 1 11349 104 1 2 chr5 14837000 14838581 -184791569 - THE1B-int LTR MaLR 0 1580 1 2214 122 48 20 chr5 14838581 14838935 -184791215 - THE1B LTR MaLR 0 364 1 326 349 34 7 chr5 14839071 14839217 -184790933 + LTR16A LTR ERVL 1 150 -300 624 349 49 0 chr5 14839406 14839690 -184790460 + MERVL LTR ERVL 8 305 -4691 412 333 50 5 chr5 14839697 14839895 -184790255 + MERVL LTR ERVL 1693 1899 -3097 280 390 29 10 chr5 14840118 14840323 -184789827 + MERVL LTR ERVL 4738 4946 -539 439 278 71 50 chr5 14840849 14841410 -184788740 - L1M4 LINE L1 -1319 4827 4255 701 138 9 0 chr5 14841412 14841521 -184788629 - THE1C LTR MaLR 0 375 266 905 192 78 0 chr5 14841652 14841819 -184788331 + AluJo SINE Alu 1 180 -132 486 287 33 0 chr5 14841919 14842041 -184788109 - L1M4 LINE L1 -2022 4124 3999 680 187 0 8 chr5 14842071 14842194 -184787956 - L1PA16 LINE L1 -3 6163 6042 242 183 0 61 chr5 14843362 14843444 -184786706 + (TA)n Simple_repeat Simple_repeat 2 78 0 25 75 0 0 chr5 14943516 14943569 -184686581 + AT_rich Low_complexity Low_complexity 1 53 0 913 62 62 0 chr5 14943693 14943822 -184686328 - L1PA13 LINE L1 0 6163 6027 186 103 0 0 chr5 14944089 14944118 -184686032 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 29 0 0 chr5 14944118 14944153 -184685997 + AT_rich Low_complexity Low_complexity 1 35 0 522 83 24 0 chr5 14944846 14944930 -184685220 - L1PA13 LINE L1 -147 6016 5931 857 286 22 41 chr5 14944958 14945498 -184684652 - L1M4 LINE L1 -2369 3777 3254 350 246 51 51 chr5 14945646 14945764 -184684386 + L2 LINE L2 2102 2219 -1095 222 37 0 0 chr5 14946166 14946193 -184683957 + (TG)n Simple_repeat Simple_repeat 2 28 0 220 218 18 0 chr5 14947496 14947551 -184682599 + (CATATA)n Simple_repeat Simple_repeat 6 61 0 338 178 11 33 chr5 14948247 14948337 -184681813 + L1MA8 LINE L1 6200 6287 -4 267 271 67 51 chr5 14948343 14948598 -184681552 + L1M4 LINE L1 4349 4607 -1539 954 101 25 0 chr5 14948870 14949028 -184681122 - HERVL LTR ERVL -147 5507 5346 182 316 40 13 chr5 14949136 14949212 -184680938 - L2 LINE L2 -780 2534 2457 699 210 7 45 chr5 14949274 14949562 -184680588 - MLT1A1 LTR MaLR 0 374 1 31 26 0 0 chr5 14949589 14949627 -184680523 + AT_rich Low_complexity Low_complexity 1 38 0 280 383 93 35 chr5 14949627 14950197 -184679953 - L2 LINE L2 -962 2352 1750 342 143 0 0 chr5 14950309 14950365 -184679785 - MLT2A2 LTR ERVL 0 515 460 265 344 0 0 chr5 14950367 14950492 -184679658 + (CATA)n Simple_repeat Simple_repeat 4 128 0 2987 91 20 2 chr5 14950493 14950899 -184679251 - MLT2A2 LTR ERVL -40 413 1 450 322 142 24 chr5 14951420 14951879 -184678271 - L1M4 LINE L1 -3417 2729 2217 37 62 0 0 chr5 14951999 14952064 -184678086 + AT_rich Low_complexity Low_complexity 1 65 0 247 258 16 0 chr5 14952635 14952697 -184677453 + (TG)n Simple_repeat Simple_repeat 2 64 0 342 0 0 0 chr5 14953475 14953513 -184676637 + (CA)n Simple_repeat Simple_repeat 2 39 0 303 49 0 0 chr5 14953512 14953553 -184676597 + (TC)n Simple_repeat Simple_repeat 1 41 0 * 12905 159 44 8 chr5 14953553 14955878 -184674272 - Tigger1 DNA MER2_type -9 2409 1 486 290 50 35 chr5 14955878 14956161 -184673989 - L1MC4 LINE L1 -134 7908 7622 674 236 72 29 chr5 14957011 14957358 -184672792 - L1M4 LINE L1 -2598 4967 4606 1097 229 103 0 chr5 14957419 14957690 -184672460 + L1MC3 LINE L1 7027 7325 -460 649 249 5 11 chr5 14957689 14957878 -184672272 + L1MC3 LINE L1 7594 7781 -4 * 2318 124 21 0 chr5 14957915 14958293 -184671857 - L1PA13 LINE L1 -1 6162 5777 959 135 12 5 chr5 14958293 14958453 -184671697 + L1PA13 LINE L1 5607 5754 -409 208 367 65 43 chr5 14959353 14959492 -184670658 + MIR SINE MIR 8 149 -113 22 0 0 0 chr5 14959694 14959716 -184670434 + AT_rich Low_complexity Low_complexity 1 22 0 306 345 42 0 chr5 14959788 14959956 -184670194 - MLT1-int LTR MaLR -912 459 285 1567 174 36 0 chr5 14960309 14960584 -184669566 - AluJb SINE Alu -17 295 11 4893 235 49 10 chr5 14961396 14962745 -184667405 - L1M4 LINE L1 -5750 1815 22 306 0 0 0 chr5 14962784 14962818 -184667332 + (TA)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr5 14962819 14962843 -184667307 + (GA)n Simple_repeat Simple_repeat 1 24 0 297 277 118 30 chr5 14962843 14963139 -184667011 - L1MCc LINE L1 -4620 2502 2181 35 24 0 0 chr5 14963147 14963189 -184666961 + AT_rich Low_complexity Low_complexity 1 42 0 240 122 49 0 chr5 14963198 14963239 -184666911 - L1MA3 LINE L1 -23 6282 6240 1359 278 61 80 chr5 14963251 14964923 -184665227 - L1MCc LINE L1 -4897 1526 365 304 328 87 21 chr5 14965369 14965656 -184664494 - L1MCc LINE L1 -6100 323 18 204 40 0 0 chr5 14965878 14965903 -184664247 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5272 191 49 23 chr5 14966470 14967873 -184662277 - L1MCa LINE L1 -4413 2013 483 261 49 0 0 chr5 14967945 14967986 -184662164 + L1MA3 LINE L1 6265 6305 0 1647 245 55 39 chr5 14968004 14968493 -184661657 - L1MCa LINE L1 -5929 497 1 1094 277 19 60 chr5 14968584 14969014 -184661136 + MER92A LTR ERV1 1 412 0 280 377 29 0 chr5 14969259 14969397 -184660753 - MIR SINE MIR -115 147 6 403 240 10 0 chr5 14969957 14970053 -184660097 - FLAM_C SINE Alu -6 127 31 2267 133 55 38 chr5 14970056 14970279 -184659871 - MSTA LTR MaLR 0 428 193 2184 112 3 13 chr5 14970279 14970591 -184659559 - AluSx SINE Alu -3 309 1 2267 133 55 38 chr5 14970591 14970788 -184659362 - MSTA LTR MaLR -235 193 1 622 183 26 0 chr5 14971876 14971991 -184658159 - L1MC3 LINE L1 -1645 6140 6023 * 1157 215 102 50 chr5 14971984 14972762 -184657388 - L1MC3 LINE L1 -743 5403 4746 285 289 18 0 chr5 14972757 14972871 -184657279 - L1MC3 LINE L1 -1798 4348 4233 * 2128 232 40 8 chr5 14972881 14973540 -184656610 - L1 LINE L1 -2650 3496 2817 1630 161 3 31 chr5 14973558 14973876 -184656274 - AluSx SINE Alu 0 310 1 3509 249 44 46 chr5 14973876 14975071 -184655079 - L1M4 LINE L1 -1489 4657 3461 7579 27 3 7 chr5 14975071 14976417 -184653733 - L1PA4 LINE L1 0 6155 4810 3509 249 44 46 chr5 14976417 14976464 -184653686 - L1M4 LINE L1 -2685 3461 3415 2353 98 0 0 chr5 14976464 14976769 -184653381 + AluSc SINE Alu 3 307 -2 3509 249 44 46 chr5 14976769 14977163 -184652987 - L1M4 LINE L1 -2731 3415 3024 749 320 119 8 chr5 14977156 14977525 -184652625 - L1MCb LINE L1 -5430 615 206 * 5401 136 37 0 chr5 14977530 14978359 -184651791 - HERVL18 LTR ERVL -790 5257 4398 5571 173 1 2 chr5 14978365 14979228 -184650922 - HERVL18 LTR ERVL -2468 3579 2718 1418 137 11 2 chr5 14979225 14979496 -184650654 - HERVL18 LTR ERVL -3595 2452 2119 * 1133 188 17 10 chr5 14979495 14979852 -184650298 - HERVL18 LTR ERVL -4237 1810 1388 * 472 209 0 0 chr5 14979840 14979931 -184650219 - HERVL18 LTR ERVL -5086 961 871 * 3892 219 22 3 chr5 14979929 14980684 -184649466 - HERVL18 LTR ERVL -5277 770 1 681 254 136 55 chr5 14980690 14981020 -184649130 - LTR18A LTR ERVL 0 357 1 1027 269 86 35 chr5 14981159 14981587 -184648563 - MLT1D LTR MaLR -5 500 51 1568 179 152 16 chr5 14982237 14982611 -184647539 - MSTA LTR MaLR -3 425 1 283 313 16 55 chr5 14983452 14983580 -184646570 + L2 LINE L2 2737 2859 -455 566 268 98 16 chr5 14983580 14983774 -184646376 - MER63A DNA MER1_type 0 210 1 393 261 107 102 chr5 14983784 14983950 -184646200 + L2 LINE L2 2928 3092 -221 192 77 0 0 chr5 14983950 14983976 -184646174 + (CA)n Simple_repeat Simple_repeat 2 27 0 393 261 107 102 chr5 14983976 14984192 -184645958 + L2 LINE L2 3092 3312 -1 233 143 0 0 chr5 14985697 14985732 -184644418 - MSTB LTR MaLR -59 367 333 528 245 75 82 chr5 14985925 14986151 -184643999 + MLT1E2 LTR MaLR 1 199 -306 2482 56 3 3 chr5 14986308 14986627 -184643523 - L1PA7 LINE L1 -1 6153 5835 780 294 163 11 chr5 14986648 14986924 -184643226 + MLT1E2 LTR MaLR 302 619 -7 182 224 86 17 chr5 14987010 14987068 -184643082 - L2 LINE L2 -60 3253 3192 428 144 29 10 chr5 14988945 14989049 -184641101 + (TA)n Simple_repeat Simple_repeat 2 107 0 772 216 0 0 chr5 14990000 14990167 -184639983 + L1P LINE L1 3349 3515 -2631 2591 164 38 10 chr5 14990186 14990693 -184639457 + L1PA16 LINE L1 5646 6166 0 36670 95 10 3 chr5 14991548 14996537 -184633613 + HERVL LTR ERVL 626 5652 -2 2302 60 7 0 chr5 14997826 14998108 -184632042 - AluY SINE Alu -27 284 1 27 62 0 0 chr5 14998115 14998163 -184631987 + AT_rich Low_complexity Low_complexity 1 48 0 190 385 101 0 chr5 14998551 14998660 -184631490 - L3 LINE CR1 -417 1160 1041 852 234 155 33 chr5 14999173 14999625 -184630525 + Charlie4a DNA MER1_type 1 507 -1 2184 86 16 13 chr5 14999631 14999935 -184630215 + AluY SINE Alu 1 305 -6 4991 186 16 0 chr5 15000141 15001069 -184629081 - L1MC1 LINE L1 -5 6328 5386 263 189 0 0 chr5 15001082 15001135 -184629015 + Tigger1 DNA MER2_type 7 59 -2359 5648 91 23 9 chr5 15001135 15001428 -184628722 - L1PA10 LINE L1 -15 6153 5861 1419 228 48 70 chr5 15001428 15002329 -184627821 - L1MC3 LINE L1 -757 5389 4978 2123 115 3 3 chr5 15002626 15002921 -184627229 - AluSx SINE Alu -17 295 1 352 356 79 50 chr5 15004431 15005074 -184625076 + HERVL LTR ERVL 1454 2115 -3539 699 252 45 36 chr5 15005141 15005470 -184624680 - L1MC3 LINE L1 -1503 4643 4307 382 292 121 38 chr5 15005480 15005795 -184624355 - L1MC3 LINE L1 -2003 4143 3803 894 76 61 0 chr5 15006202 15006333 -184623817 - MER85 DNA T2_type 0 139 1 495 255 26 57 chr5 15006835 15007027 -184623123 + Ricksha DNA DNA 9 194 -1060 * 931 186 89 13 chr5 15006886 15007123 -184623027 - Ricksha DNA DNA -14 3237 2983 2489 154 39 25 chr5 15007123 15007558 -184622592 - Ricksha DNA DNA -1116 2130 1690 871 186 42 7 chr5 15007550 15007749 -184622401 - Ricksha DNA DNA -1107 147 1 * 1012 203 188 32 chr5 15008002 15008406 -184621744 + MLT1C LTR MaLR 1 467 0 306 125 0 0 chr5 15009003 15009051 -184621099 + (A)n Simple_repeat Simple_repeat 1 48 0 22 80 0 0 chr5 15009404 15009454 -184620696 + AT_rich Low_complexity Low_complexity 1 50 0 185 305 0 73 chr5 15011653 15011735 -184618415 + L3 LINE CR1 885 960 -617 1948 151 26 32 chr5 15012490 15012867 -184617283 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr5 15012878 15012899 -184617251 + AT_rich Low_complexity Low_complexity 1 21 0 1835 207 16 8 chr5 15013363 15013750 -184616400 + MLT1B LTR MaLR 1 390 0 24 53 0 0 chr5 15013811 15013849 -184616301 + AT_rich Low_complexity Low_complexity 1 38 0 425 238 50 38 chr5 15013915 15014075 -184616075 - MER46C DNA MER2_type -74 264 103 295 239 34 60 chr5 15015040 15015157 -184614993 - MER104 DNA Tc2 -47 133 20 1024 242 0 9 chr5 15016059 15016282 -184613868 - MER58A DNA MER1_type -1 223 3 21 36 0 0 chr5 15016722 15016750 -184613400 + AT_rich Low_complexity Low_complexity 1 28 0 2470 59 0 0 chr5 15016995 15017300 -184612850 - AluY SINE Alu -6 305 1 312 270 117 55 chr5 15017396 15017559 -184612591 - MIR SINE MIR -50 212 40 33 25 0 0 chr5 15017662 15017702 -184612448 + AT_rich Low_complexity Low_complexity 1 40 0 6226 137 36 3 chr5 15017953 15018960 -184611190 + Tigger2 DNA MER2_type 1676 2715 -3 1407 237 106 3 chr5 15022630 15022988 -184607162 - MSTD LTR MaLR 0 396 2 1408 160 109 37 chr5 15023314 15023664 -184606486 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr5 15023775 15023796 -184606354 + AT_rich Low_complexity Low_complexity 1 21 0 387 313 61 30 chr5 15024155 15024353 -184605797 + MLT1H LTR MaLR 5 208 -341 410 284 15 8 chr5 15025223 15025279 -184604871 - MLT1E3 LTR MaLR 0 624 570 1561 101 4 40 chr5 15025279 15025543 -184604607 + AluSp SINE Alu 65 320 0 410 284 15 8 chr5 15025543 15025619 -184604531 - MLT1E3 LTR MaLR -54 570 490 5485 90 19 3 chr5 15025619 15026365 -184603785 - HERVL LTR ERVL -3248 2406 1649 833 184 74 23 chr5 15026755 15026972 -184603178 - L1ME LINE L1 -614 5548 5321 1732 282 52 16 chr5 15026988 15027817 -184602333 - L1ME LINE L1 -907 5239 4381 332 281 116 14 chr5 15028078 15028224 -184601926 + MLT1H LTR MaLR 382 542 -7 21 0 0 0 chr5 15028555 15028576 -184601574 + AT_rich Low_complexity Low_complexity 1 21 0 185 371 126 0 chr5 15028784 15028951 -184601199 - L2 LINE L2 -672 2642 2455 1884 114 53 23 chr5 15030034 15030333 -184599817 - AluSg SINE Alu 0 310 3 185 196 18 0 chr5 15030663 15030719 -184599431 + CT-rich Low_complexity Low_complexity 2 58 0 23 33 0 0 chr5 15031074 15031104 -184599046 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr5 15032314 15032345 -184597805 + AT_rich Low_complexity Low_complexity 1 31 0 587 313 100 42 chr5 15032604 15033013 -184597137 - L2 LINE L2 0 3313 2881 48 67 0 0 chr5 15033302 15033392 -184596758 + AT_rich Low_complexity Low_complexity 1 90 0 302 115 19 0 chr5 15033558 15033610 -184596540 + GA-rich Low_complexity Low_complexity 4 56 0 856 259 87 54 chr5 15034404 15034851 -184595299 - MLT1C LTR MaLR 0 467 6 360 260 16 16 chr5 15036632 15036755 -184593395 + LTR33 LTR ERVL 392 514 -7 1411 172 23 23 chr5 15037427 15037729 -184592421 + L1PA12 LINE L1 5858 6159 -9 31 0 0 0 chr5 15038469 15038500 -184591650 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 15038576 15038597 -184591553 + AT_rich Low_complexity Low_complexity 1 21 0 273 146 0 0 chr5 15038647 15038695 -184591455 + (CA)n Simple_repeat Simple_repeat 1 48 0 229 239 37 18 chr5 15038737 15038846 -184591304 + (TA)n Simple_repeat Simple_repeat 1 111 0 1204 184 31 0 chr5 15039293 15039516 -184590634 + AluJb SINE Alu 1 230 -82 22 56 0 0 chr5 15040538 15040574 -184589576 + AT_rich Low_complexity Low_complexity 1 36 0 1775 275 65 27 chr5 15042067 15042623 -184587527 + MLT1E LTR MaLR 10 586 -7 1059 293 48 6 chr5 15042628 15043095 -184587055 + MLT1E-int LTR MaLR 1 606 -765 324 310 47 35 chr5 15043342 15043513 -184586637 + MLT1E-int LTR MaLR 711 883 -488 394 284 97 94 chr5 15043650 15043992 -184586158 + MLT1E-int LTR MaLR 985 1327 -44 381 284 28 37 chr5 15044119 15044228 -184585922 + MLT1E LTR MaLR 45 152 -441 297 197 0 0 chr5 15046647 15046718 -184583432 + GA-rich Low_complexity Low_complexity 1 71 0 1507 186 68 22 chr5 15046728 15047050 -184583100 - MER1B DNA MER1_type 0 337 1 297 0 0 0 chr5 15047157 15047190 -184582960 + (CA)n Simple_repeat Simple_repeat 1 33 0 381 58 0 0 chr5 15047420 15047472 -184582678 + (TG)n Simple_repeat Simple_repeat 2 53 0 278 270 95 16 chr5 15048179 15048305 -184581845 + MIR SINE MIR 75 210 -52 1883 27 0 0 chr5 15048453 15048673 -184581477 - L1PA3 LINE L1 -1949 4197 3978 9789 28 8 0 chr5 15048674 15050612 -184579538 + L1PA3 LINE L1 4211 6155 0 3322 156 52 17 chr5 15050612 15051240 -184578910 + L1PB4 LINE L1 5484 6140 -16 1209 283 120 25 chr5 15051349 15052184 -184577966 - L1ME3A LINE L1 -86 6084 5173 860 272 16 10 chr5 15052399 15052711 -184577439 - L1ME3A LINE L1 -1367 4779 4466 22 35 0 0 chr5 15052745 15052774 -184577376 + AT_rich Low_complexity Low_complexity 1 29 0 1042 207 82 28 chr5 15052789 15053085 -184577065 - L1MB8 LINE L1 -12 6166 5848 271 344 48 0 chr5 15053788 15053913 -184576237 + L2 LINE L2 3179 3309 -4 22 0 0 0 chr5 15054279 15054301 -184575849 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 15054796 15054821 -184575329 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 15055593 15055614 -184574536 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr5 15055853 15055876 -184574274 + (A)n Simple_repeat Simple_repeat 1 23 0 362 341 114 26 chr5 15056610 15056918 -184573232 + MLT1I LTR MaLR 1 335 -74 25 0 0 0 chr5 15057064 15057089 -184573061 + AT_rich Low_complexity Low_complexity 1 25 0 528 190 72 138 chr5 15057404 15057532 -184572618 + MER20 DNA MER1_type 38 150 -69 477 0 0 0 chr5 15057532 15057585 -184572565 + (CA)n Simple_repeat Simple_repeat 1 53 0 528 190 72 138 chr5 15057585 15057651 -184572499 + MER20 DNA MER1_type 150 219 0 1868 112 42 14 chr5 15057942 15058229 -184571921 + AluSx SINE Alu 1 295 -17 305 375 33 25 chr5 15058653 15058896 -184571254 - L2 LINE L2 -869 2445 2201 * 707 284 28 14 chr5 15058888 15059106 -184571044 - MIR SINE MIR -2 260 40 1484 242 14 16 chr5 15059672 15060036 -184570114 - MLT1A1 LTR MaLR -2 363 1 21 36 0 0 chr5 15060084 15060112 -184570038 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr5 15060793 15060840 -184569310 + (CA)n Simple_repeat Simple_repeat 2 48 0 218 284 204 0 chr5 15063112 15063200 -184566950 - L2 LINE L2 0 3313 3208 245 167 15 76 chr5 15063392 15063458 -184566692 - L1MCa LINE L1 -5720 844 783 204 231 19 0 chr5 15063541 15063593 -184566557 + T-rich Low_complexity Low_complexity 2 54 0 1244 264 82 23 chr5 15063596 15064111 -184566039 - L1MCa LINE L1 -5493 552 8 7547 202 41 5 chr5 15065563 15068185 -184561965 + L1PA16 LINE L1 3437 6153 -13 51 0 0 0 chr5 15068185 15068236 -184561914 + AT_rich Low_complexity Low_complexity 1 51 0 221 270 10 0 chr5 15068576 15068676 -184561474 + GA-rich Low_complexity Low_complexity 4 104 0 1983 261 83 26 chr5 15068709 15069564 -184560586 - L1M4 LINE L1 -5034 1821 908 231 205 154 0 chr5 15069576 15069654 -184560496 - L1M4 LINE L1 -6664 195 106 584 282 143 18 chr5 15069763 15070331 -184559819 + L1ME1 LINE L1 3898 4536 -1610 5317 118 2 2 chr5 15070336 15071941 -184558209 - L1PA13 LINE L1 -4 6159 4533 1786 258 105 37 chr5 15072186 15072202 -184557948 + L1ME1 LINE L1 4979 4992 -1172 198 118 0 0 chr5 15072202 15072236 -184557914 + (CA)n Simple_repeat Simple_repeat 2 35 0 1786 258 105 37 chr5 15072236 15073304 -184556846 + L1ME1 LINE L1 4992 6152 -12 2048 122 0 34 chr5 15073435 15073756 -184556394 - AluSg SINE Alu 0 310 1 322 262 0 47 chr5 15073955 15074045 -184556105 + T-rich Low_complexity Low_complexity 3 85 -59 1567 112 23 11 chr5 15074045 15074305 -184555845 - L1MA1 LINE L1 0 6302 6040 322 262 0 47 chr5 15074305 15074363 -184555787 + T-rich Low_complexity Low_complexity 85 144 0 1460 196 31 78 chr5 15074508 15074891 -184555259 - MLT1A1 LTR MaLR 0 365 1 2272 70 0 7 chr5 15075907 15076206 -184553944 + AluY SINE Alu 1 297 -14 34 55 0 0 chr5 15077655 15077710 -184552440 + AT_rich Low_complexity Low_complexity 1 55 0 11755 161 41 47 chr5 15080265 15081819 -184548331 + Tigger1 DNA MER2_type 1 1535 -883 2291 93 3 0 chr5 15081819 15082121 -184548029 + AluSx SINE Alu 1 303 -9 11755 161 41 47 chr5 15082121 15083000 -184547150 + Tigger1 DNA MER2_type 1535 2418 0 282 286 148 39 chr5 15083352 15083555 -184546595 - MLT1F LTR MaLR -298 244 20 1712 126 43 22 chr5 15085008 15085285 -184544865 + AluSq SINE Alu 1 283 -30 314 109 36 0 chr5 15085285 15085340 -184544810 + GA-rich Low_complexity Low_complexity 2 58 0 271 289 0 0 chr5 15085349 15085438 -184544712 + (CTGGGG)n Simple_repeat Simple_repeat 1 89 0 24 75 0 0 chr5 15085601 15085641 -184544509 + GC_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 15088341 15088362 -184541788 + AT_rich Low_complexity Low_complexity 1 21 0 213 152 43 0 chr5 15088780 15088826 -184541324 + (CA)n Simple_repeat Simple_repeat 1 48 0 2076 117 10 0 chr5 15089321 15089620 -184540530 - AluSp SINE Alu -11 302 1 21 0 0 0 chr5 15089673 15089694 -184540456 + AT_rich Low_complexity Low_complexity 1 21 0 3767 234 84 17 chr5 15090905 15092286 -184537864 + L1MC3 LINE L1 4385 5024 -1122 306 0 0 0 chr5 15092286 15092320 -184537830 + (TG)n Simple_repeat Simple_repeat 2 35 0 3767 234 84 17 chr5 15092320 15092723 -184537427 + L1MC3 LINE L1 5024 5398 -748 4030 236 43 27 chr5 15092740 15093854 -184536296 + L1MC3 LINE L1 6452 7546 -239 2374 81 7 0 chr5 15093854 15094163 -184535987 + AluY SINE Alu 1 311 0 4030 236 43 27 chr5 15094163 15094227 -184535923 + L1MC3 LINE L1 7546 7607 -178 1220 163 42 102 chr5 15094227 15094588 -184535562 - MER44D DNA MER2_type 0 609 1 4030 236 43 27 chr5 15094588 15094663 -184535487 + L1MC3 LINE L1 7607 7733 -52 632 208 0 11 chr5 15094663 15094799 -184535351 + MLT1A1 LTR MaLR 8 126 -239 11398 208 44 23 chr5 15094989 15098250 -184531900 + L1M1 LINE L1 2233 5562 -743 487 133 89 0 chr5 15098410 15098500 -184531650 + MER4A LTR ERV1 1 98 -566 1624 134 22 76 chr5 15098500 15098865 -184531285 + MER4A LTR ERV1 261 664 0 241 156 22 0 chr5 15099050 15099095 -184531055 - MLT2B1 LTR ERVL 0 464 419 1389 213 94 2 chr5 15099176 15099549 -184530601 - MLT2B1 LTR ERVL -56 459 1 1582 188 0 17 chr5 15099656 15099954 -184530196 - MER4A LTR ERV1 0 664 372 439 125 42 31 chr5 15100003 15100099 -184530051 - MER4A LTR ERV1 -567 97 1 354 293 78 53 chr5 15100176 15100459 -184529691 + L1M4 LINE L1 3086 3375 -2771 278 280 223 24 chr5 15100815 15101026 -184529124 - LTR16A1 LTR ERVL -7 450 198 1766 135 55 50 chr5 15101706 15102068 -184528082 - THE1B LTR MaLR 0 364 1 11744 102 4 0 chr5 15102068 15103642 -184526508 - THE1B-int LTR MaLR 0 1580 1 1742 138 92 43 chr5 15103642 15103989 -184526161 - THE1B LTR MaLR 0 364 1 2011 248 68 22 chr5 15104164 15104850 -184525300 + MER50 LTR ERV1 11 728 -6 2514 156 2 5 chr5 15155022 15155427 -184474723 + MSTB-int LTR MaLR 1248 1651 0 943 219 55 48 chr5 15155427 15155719 -184474431 + MSTB LTR MaLR 1 294 -132 319 372 11 27 chr5 15156001 15156184 -184473966 + MER5A DNA MER1_type 7 186 -3 287 276 98 57 chr5 15156596 15156773 -184473377 - MIR3 SINE MIR -62 200 14 29 28 0 0 chr5 15156976 15157012 -184473138 + AT_rich Low_complexity Low_complexity 1 36 0 5028 67 6 0 chr5 15157113 15157767 -184472383 + L1PA7 LINE L1 5497 6154 0 297 219 0 0 chr5 15158178 15158242 -184471908 + MLT1A2 LTR MaLR 309 372 -2 315 0 0 0 chr5 15158405 15158440 -184471710 + (TG)n Simple_repeat Simple_repeat 2 36 0 2657 113 0 3 chr5 15159304 15159676 -184470474 + THE1C LTR MaLR 5 375 0 21 36 0 0 chr5 15160274 15160302 -184469848 + AT_rich Low_complexity Low_complexity 1 28 0 249 172 0 0 chr5 15161151 15161215 -184468935 + (TA)n Simple_repeat Simple_repeat 1 64 0 685 258 31 0 chr5 15162011 15162174 -184467976 - MER5A DNA MER1_type -6 183 16 399 138 11 32 chr5 15162681 15162775 -184467375 + GA-rich Low_complexity Low_complexity 2 93 0 673 282 7 0 chr5 15162866 15163015 -184467135 + MER45A DNA AcHobo 1 150 -28 1760 174 7 0 chr5 15164096 15164390 -184465760 - AluSx SINE Alu -14 298 3 376 347 67 0 chr5 15164519 15164712 -184465438 + MIR SINE MIR 31 236 -26 234 375 42 0 chr5 15165058 15165202 -184464948 - MIR3 SINE MIR -18 190 41 319 309 0 0 chr5 15165758 15165852 -184464298 + (TA)n Simple_repeat Simple_repeat 2 95 0 35 41 0 0 chr5 15165890 15165939 -184464211 + AT_rich Low_complexity Low_complexity 1 49 0 319 351 34 55 chr5 15166705 15166998 -184463152 + L2 LINE L2 2665 2950 -363 665 273 126 14 chr5 15167901 15168194 -184461956 + L1MC4a LINE L1 5591 5916 -1892 25 51 0 0 chr5 15168272 15168311 -184461839 + AT_rich Low_complexity Low_complexity 1 39 0 6584 79 14 0 chr5 15168459 15169771 -184460379 + L1PA8 LINE L1 4838 6169 -3 2848 202 66 28 chr5 15169895 15171416 -184458734 - L1MA9 LINE L1 -10 6302 4548 393 291 10 15 chr5 15171396 15171602 -184458548 + L1 LINE L1 3024 3228 -4337 * 5079 188 15 19 chr5 15171604 15172320 -184457830 + L1 LINE L1 4873 5585 -1980 2301 101 0 3 chr5 15172320 15172628 -184457522 + AluY SINE Alu 1 307 -4 5079 188 15 19 chr5 15172628 15173031 -184457119 + L1 LINE L1 5585 5988 -1577 2010 143 3 3 chr5 15173039 15173340 -184456810 - AluSq SINE Alu -12 301 1 4998 71 27 1 chr5 15174292 15174969 -184455181 + L1PA8 LINE L1 5465 6158 -14 2925 227 72 38 chr5 15175144 15176050 -184454100 - Charlie1 DNA MER1_type -199 2562 1626 2126 131 3 10 chr5 15176621 15176935 -184453215 - AluSx SINE Alu 0 312 1 25 31 0 0 chr5 15178451 15178483 -184451667 + AT_rich Low_complexity Low_complexity 1 32 0 202 203 43 14 chr5 15178947 15179016 -184451134 + (AAATG)n Simple_repeat Simple_repeat 4 74 0 832 221 169 66 chr5 15179296 15179654 -184450496 + MER50 LTR ERV1 10 439 -295 3223 111 47 12 chr5 15179654 15180148 -184450002 - MER9 LTR ERVK 0 511 1 832 221 169 66 chr5 15180148 15180305 -184449845 + MER50 LTR ERV1 439 578 -156 4352 31 4 0 chr5 15180346 15180864 -184449286 - L1PA3 LINE L1 0 6155 5636 4750 18 0 5 chr5 15180864 15181650 -184448500 + L1PA3 LINE L1 4825 5608 -547 856 204 0 0 chr5 15181651 15181813 -184448337 + MER50 LTR ERV1 573 734 0 2350 178 18 7 chr5 15182015 15182471 -184447679 + LOR1b LTR ERV1 1 461 0 22 56 0 0 chr5 15182581 15182617 -184447533 + AT_rich Low_complexity Low_complexity 1 36 0 307 336 18 0 chr5 15183143 15183256 -184446894 + (TG)n Simple_repeat Simple_repeat 2 116 0 1981 193 49 27 chr5 15183369 15183719 -184446431 - LOR1b LTR ERV1 -1 460 96 1989 140 3 0 chr5 15183719 15184012 -184446138 + AluSx SINE Alu 17 310 -2 1981 193 49 27 chr5 15184012 15184111 -184446039 - LOR1b LTR ERV1 -365 96 1 3404 21 9 17 chr5 15184450 15184869 -184445281 - L1PA3 LINE L1 -3 6152 5737 184 339 0 0 chr5 15186697 15186756 -184443394 + L2 LINE L2 3180 3238 -75 1873 202 77 7 chr5 15186879 15187294 -184442856 + MSTB2 LTR MaLR 14 457 0 207 0 0 0 chr5 15188516 15188539 -184441611 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 225 0 0 0 chr5 15188812 15188837 -184441313 + (TG)n Simple_repeat Simple_repeat 2 26 0 350 327 119 0 chr5 15189871 15190030 -184440120 - MIR SINE MIR 0 262 85 252 376 12 0 chr5 15190233 15190318 -184439832 + MLT1I LTR MaLR 223 308 -101 524 261 94 108 chr5 15190424 15190861 -184439289 - LTR16A LTR ERVL -3 447 17 528 338 40 15 chr5 15191186 15191387 -184438763 - LTR16A LTR ERVL -162 288 83 13900 74 6 3 chr5 15191470 15193251 -184436899 - HERVL-A1 LTR ERVL -3867 1787 1 2848 101 47 7 chr5 15193251 15193291 -184436859 - MLT2A1 LTR ERVL 0 444 407 486 88 0 0 chr5 15193291 15193359 -184436791 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 2848 101 47 7 chr5 15193359 15193745 -184436405 - MLT2A1 LTR ERVL -37 407 1 225 0 0 0 chr5 15194441 15194466 -184435684 + (TG)n Simple_repeat Simple_repeat 2 26 0 213 269 0 11 chr5 15194996 15195089 -184435061 + T-rich Low_complexity Low_complexity 5 96 0 8319 121 12 7 chr5 15195210 15196516 -184433634 - L1PA8A LINE L1 -1205 4941 3629 6174 95 3 1 chr5 15196516 15197696 -184432454 + L1PA8A LINE L1 4949 6127 -4 215 227 34 11 chr5 15197699 15197787 -184432363 + (TA)n Simple_repeat Simple_repeat 2 91 0 306 0 0 0 chr5 15197804 15197838 -184432312 + (TA)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr5 15198528 15198556 -184431594 + AT_rich Low_complexity Low_complexity 1 28 0 2332 92 7 0 chr5 15199404 15199710 -184430440 - AluSq SINE Alu -5 308 1 254 254 0 0 chr5 15199946 15200001 -184430149 + MLT1J LTR MaLR 110 164 -347 2021 97 0 71 chr5 15200120 15200431 -184429719 + AluSx SINE Alu 1 289 -23 262 239 28 0 chr5 15200656 15200727 -184429423 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 322 342 10 1 chr5 15200742 15200865 -184429285 + MIR SINE MIR 21 143 -65 2098 134 7 0 chr5 15201965 15202271 -184427879 - AluSc SINE Alu -1 308 1 2416 75 0 0 chr5 15202352 15202644 -184427506 + AluY SINE Alu 1 292 -19 339 150 0 0 chr5 15203187 15203247 -184426903 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 1223 212 43 11 chr5 15203506 15203784 -184426366 + MER90 LTR ERV1 328 614 0 2906 248 57 79 chr5 15204642 15205526 -184424624 - L1M4 LINE L1 -1328 4818 3991 314 22 0 65 chr5 15205526 15205572 -184424578 - L1PA12 LINE L1 -10 6158 6116 2906 248 57 79 chr5 15205572 15206441 -184423709 - L1M4 LINE L1 -2155 3991 3104 182 318 11 80 chr5 15207987 15208075 -184422075 + L2 LINE L2 3181 3262 -10 22 0 0 0 chr5 15208176 15208198 -184421952 + AT_rich Low_complexity Low_complexity 1 22 0 220 286 32 0 chr5 15209059 15209122 -184421028 - L2 LINE L2 -7 3306 3242 369 0 0 0 chr5 15209211 15209226 -184420924 + (TG)n Simple_repeat Simple_repeat 1 56 0 369 0 0 0 chr5 15209226 15209267 -184420883 + (TG)n Simple_repeat Simple_repeat 2 42 0 2413 160 2 5 chr5 15209373 15209773 -184420377 - Tigger2 DNA MER2_type -53 2665 2267 355 246 0 0 chr5 15209757 15209826 -184420324 - Tigger2 DNA MER2_type -2649 69 1 * 362 338 113 42 chr5 15209862 15210241 -184419909 - L2 LINE L2 -2071 1243 838 1530 179 71 15 chr5 15211947 15212271 -184417879 - L1M3 LINE L1 -524 5810 5469 * 1630 182 119 7 chr5 15212269 15212682 -184417468 + L1MA10 LINE L1 5873 6331 -3 685 295 48 0 chr5 15212730 15212937 -184417213 + MIR SINE MIR 15 231 -31 844 251 4 39 chr5 15213152 15213383 -184416767 - MER58A DNA MER1_type -1 223 1 225 263 0 0 chr5 15214948 15215005 -184415145 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 529 287 113 12 chr5 15215880 15216082 -184414068 + MER5C DNA MER1_type 1 234 -90 3731 171 24 19 chr5 15216082 15216837 -184413313 - L1MA9 LINE L1 -13 6299 5541 529 287 113 12 chr5 15216837 15216881 -184413269 + MER5C DNA MER1_type 234 272 -52 318 67 0 0 chr5 15216885 15216930 -184413220 + (CA)n Simple_repeat Simple_repeat 1 45 0 366 42 0 0 chr5 15217741 15217789 -184412361 + (CA)n Simple_repeat Simple_repeat 1 48 0 22 0 0 0 chr5 15218052 15218074 -184412076 + AT_rich Low_complexity Low_complexity 1 22 0 582 78 0 0 chr5 15218590 15218667 -184411483 + MADE1 DNA Mariner 1 77 -3 180 77 0 0 chr5 15219462 15219488 -184410662 + (CACCAT)n Simple_repeat Simple_repeat 2 27 0 25 90 0 0 chr5 15220061 15220128 -184410022 + AT_rich Low_complexity Low_complexity 1 67 0 589 302 94 47 chr5 15220937 15221321 -184408829 + MLT1I LTR MaLR 8 409 0 335 195 0 58 chr5 15223108 15223195 -184406955 - MER53 DNA DNA -85 104 23 * 402 178 0 56 chr5 15223117 15223207 -184406943 + MER53 DNA DNA 105 189 0 250 320 88 7 chr5 15224703 15224850 -184405300 - MIR SINE MIR -57 205 47 881 232 45 114 chr5 15225026 15225123 -184405027 + MLT1A1 LTR MaLR 3 105 -321 3136 166 103 3 chr5 15225123 15225775 -184404375 + LTR62 LTR ERVK 1 717 -2 881 232 45 114 chr5 15225775 15226070 -184404080 + MLT1A1 LTR MaLR 105 426 0 300 371 53 50 chr5 15226096 15226433 -184403717 + L2 LINE L2 2480 2817 -497 304 77 39 0 chr5 15226517 15226569 -184403581 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 205 148 19 19 chr5 15226712 15226766 -184403384 + CT-rich Low_complexity Low_complexity 4 57 0 1679 171 52 3 chr5 15227064 15227392 -184402758 - L1PB4 LINE L1 0 6156 5813 514 292 67 54 chr5 15227519 15227817 -184402333 - MLT1I LTR MaLR -29 380 79 285 272 37 12 chr5 15227970 15228051 -184402099 + L2 LINE L2 3186 3268 -4 288 91 0 0 chr5 15230147 15230191 -184399959 + (CA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr5 15230265 15230286 -184399864 + AT_rich Low_complexity Low_complexity 1 21 0 403 301 82 0 chr5 15232597 15232743 -184397407 + LTR16C LTR ERVL 108 265 -226 849 260 18 18 chr5 15232747 15232974 -184397176 - AluJo SINE Alu -16 296 70 2230 148 41 24 chr5 15235388 15235807 -184394343 - MSTA LTR MaLR -2 426 1 628 316 92 25 chr5 15236428 15236786 -184393364 - MLT1K LTR MaLR -27 561 180 288 0 0 0 chr5 15236786 15236818 -184393332 + (T)n Simple_repeat Simple_repeat 1 32 0 930 247 37 15 chr5 15237444 15237772 -184392378 - LTR37A LTR ERV1 -3 423 89 308 268 76 0 chr5 15239238 15239404 -184390746 + L1P LINE L1 3739 3920 -2226 376 61 0 0 chr5 15239514 15239563 -184390587 + MLT2A1 LTR ERVL 1 49 -404 1550 104 0 9 chr5 15239564 15239785 -184390365 + MLT2A1 LTR ERVL 219 437 -7 41269 84 23 7 chr5 15239786 15245348 -184384802 + HERVL-A1-A1 LTR ERVL 1 5654 0 2918 90 0 5 chr5 15245348 15245736 -184384414 + MLT2A1 LTR ERVL 1 386 -58 1616 143 122 31 chr5 15245736 15246057 -184384093 - THE1B LTR MaLR 0 364 15 10768 103 13 2 chr5 15246059 15247622 -184382528 - THE1B-int LTR MaLR 0 1580 1 504 109 0 87 chr5 15247622 15247714 -184382436 - THE1B LTR MaLR 0 355 272 257 121 61 91 chr5 15247712 15247778 -184382372 + MLT2B1 LTR ERVL 390 520 0 * 239 288 194 22 chr5 15247860 15248277 -184381873 - L1M4 LINE L1 -1544 4602 4114 456 174 37 9 chr5 15248315 15248424 -184381726 - L1MB7 LINE L1 0 6184 6073 462 275 66 60 chr5 15248431 15248575 -184381575 + L1ME LINE L1 5129 5271 -899 1905 153 27 0 chr5 15248575 15248870 -184381280 + AluSx SINE Alu 1 303 -9 462 275 66 60 chr5 15248870 15249073 -184381077 + L1ME LINE L1 5271 5481 -689 262 188 145 42 chr5 15249248 15249379 -184380771 + L1ME LINE L1 5725 5865 -305 206 345 25 50 chr5 15249673 15249792 -184380358 - MIR3 SINE MIR -84 124 9 237 254 0 14 chr5 15250773 15250844 -184379306 + L1MC4 LINE L1 7960 8029 -13 581 292 135 22 chr5 15250946 15251436 -184378714 - L1MC4 LINE L1 -424 7618 7074 26 50 0 0 chr5 15251826 15251866 -184378284 + AT_rich Low_complexity Low_complexity 1 40 0 2418 161 25 0 chr5 15252259 15252705 -184377445 + L1MA4 LINE L1 5838 6294 -6 247 318 123 53 chr5 15252875 15253045 -184377105 - MIR SINE MIR -47 215 34 4546 19 0 2 chr5 15254088 15254665 -184375485 + L1PA2 LINE L1 5619 6194 0 21 0 0 0 chr5 15255868 15255889 -184374261 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 15256081 15256109 -184374041 + AT_rich Low_complexity Low_complexity 1 28 0 270 371 62 65 chr5 15257444 15257797 -184372353 - L2 LINE L2 -5 3267 2916 220 321 101 34 chr5 15257844 15258081 -184372069 + L2 LINE L2 1472 1724 -1590 258 370 47 30 chr5 15258086 15258321 -184371829 - L2 LINE L2 -527 2787 2549 219 69 0 0 chr5 15258910 15258939 -184371211 + (CA)n Simple_repeat Simple_repeat 2 30 0 180 299 143 48 chr5 15259052 15259199 -184370951 + MIR3 SINE MIR 48 208 0 553 286 132 12 chr5 15259351 15259725 -184370425 - LTR16C LTR ERVL -10 481 33 249 196 0 0 chr5 15260850 15260901 -184369249 + (TG)n Simple_repeat Simple_repeat 1 51 0 304 326 0 22 chr5 15260901 15260993 -184369157 - L1MC4 LINE L1 -1340 6702 6613 305 143 111 0 chr5 15260916 15260979 -184369171 + L1MCa LINE L1 1995 2064 -4362 1299 238 79 9 chr5 15261037 15261378 -184368772 + MLT1A1 LTR MaLR 1 365 0 6456 210 83 34 chr5 15261378 15263033 -184367117 + MLT1A1-int LTR MaLR 1 1735 0 1118 261 64 3 chr5 15263033 15263327 -184366823 + MLT1A1 LTR MaLR 1 312 -53 2809 134 7 0 chr5 15263327 15263753 -184366397 + MER57B LTR ERV1 1 429 -5 359 158 0 0 chr5 15263758 15263815 -184366335 + MLT1A1 LTR MaLR 309 365 0 284 257 43 0 chr5 15263815 15263884 -184366266 + MLT1C LTR MaLR 84 155 -350 568 262 41 7 chr5 15263943 15264088 -184366062 + MLT1C LTR MaLR 318 467 0 1175 222 56 56 chr5 15264425 15264799 -184365351 - MLT1A2 LTR MaLR 0 374 1 26 30 0 0 chr5 15265592 15265625 -184364525 + AT_rich Low_complexity Low_complexity 1 33 0 366 168 69 59 chr5 15265735 15265836 -184364314 + MLT1A1 LTR MaLR 27 128 -377 * 1218 207 16 43 chr5 15265816 15266121 -184364029 + MLT1D LTR MaLR 209 505 0 891 178 35 11 chr5 15266271 15266445 -184363705 + L1MA2 LINE L1 16 193 -7372 * 11767 177 51 9 chr5 15266429 15269046 -184361104 + L1MA2 LINE L1 4025 6819 -904 262 67 44 0 chr5 15269046 15269091 -184361059 + (CTAAT)n Simple_repeat Simple_repeat 3 49 0 11767 177 51 9 chr5 15269091 15270033 -184360117 + L1MA2 LINE L1 6819 7720 -3 2253 109 0 0 chr5 15270054 15270357 -184359793 + AluSg SINE Alu 1 303 -7 242 164 18 0 chr5 15272364 15272419 -184357731 + (TA)n Simple_repeat Simple_repeat 1 56 0 1985 152 3 0 chr5 15273707 15274004 -184356146 + AluJb SINE Alu 1 298 -14 451 294 78 65 chr5 15274441 15274615 -184355535 + HAL1 LINE L1 1810 1980 -527 1908 224 32 60 chr5 15274615 15275182 -184354968 - MLT2B3 LTR ERVL 0 554 4 451 294 78 65 chr5 15275182 15275391 -184354759 + HAL1 LINE L1 1980 2198 -309 1986 321 37 11 chr5 15275920 15276668 -184353482 - ERVL LTR ERVL -2956 2808 2041 1763 237 63 83 chr5 15276891 15277866 -184352284 - L1M LINE L1 -749 5397 4460 190 342 13 25 chr5 15277996 15278075 -184352075 - MIR3 SINE MIR -32 176 99 397 276 152 69 chr5 15278382 15279052 -184351098 - LTR41 LTR ERVL -47 726 1 201 292 83 0 chr5 15279360 15279432 -184350718 + L2 LINE L2 1561 1638 -1676 2510 309 78 40 chr5 15279444 15280486 -184349664 + L2 LINE L2 1772 2864 -449 1726 246 52 6 chr5 15280486 15280969 -184349181 - MLT1D LTR MaLR 0 505 1 2510 309 78 40 chr5 15280969 15281099 -184349051 + L2 LINE L2 2864 2988 -325 21 0 0 0 chr5 15331388 15331409 -184298741 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 15331542 15331577 -184298573 + AT_rich Low_complexity Low_complexity 1 35 0 1865 87 48 84 chr5 15331709 15332018 -184298132 + AluSx SINE Alu 1 298 -14 3394 183 77 8 chr5 15332948 15333737 -184296413 - L1 LINE L1 -1293 5915 5072 1115 279 16 32 chr5 15333736 15334175 -184295975 - L1 LINE L1 -5146 2063 1621 * 3982 233 41 11 chr5 15334177 15335365 -184294785 - L1 LINE L1 -813 5569 4346 740 223 28 107 chr5 15335500 15335597 -184294553 - L1 LINE L1 -4283 2100 1997 2602 105 0 21 chr5 15335597 15335969 -184294181 + THE1B LTR MaLR 1 364 0 740 223 28 107 chr5 15335969 15336227 -184293923 - L1 LINE L1 -4386 1997 1371 312 155 0 0 chr5 15336280 15336351 -184293799 + GA-rich Low_complexity Low_complexity 2 72 0 207 0 0 0 chr5 15336381 15336404 -184293746 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 657 333 46 11 chr5 15337195 15337567 -184292583 + MLT1I LTR MaLR 15 399 -10 22 35 0 0 chr5 15337571 15337600 -184292550 + AT_rich Low_complexity Low_complexity 1 29 0 243 103 0 0 chr5 15337607 15337646 -184292504 + (T)n Simple_repeat Simple_repeat 1 39 0 5778 84 12 24 chr5 15337646 15338468 -184291682 - L1PA11 LINE L1 0 6174 5363 1914 186 63 32 chr5 15338494 15338957 -184291193 - L1MC2 LINE L1 -10 6334 5858 216 97 0 0 chr5 15339106 15339137 -184291013 + (TAGA)n Simple_repeat Simple_repeat 2 32 0 3097 145 30 0 chr5 15339143 15339720 -184290430 - L1P5 LINE L1 -381 5773 5184 1980 139 3 15 chr5 15339721 15340058 -184290092 - L1PA13 LINE L1 0 6163 5831 2001 172 5 3 chr5 15340059 15340432 -184289718 + L1P LINE L1 4795 5168 -978 1102 221 31 3 chr5 15340428 15340754 -184289396 - L1P5 LINE L1 -953 5193 4844 * 277 200 0 0 chr5 15340754 15340809 -184289341 + MSTD LTR MaLR 329 383 -13 21 0 0 0 chr5 15340850 15340871 -184289279 + AT_rich Low_complexity Low_complexity 1 21 0 220 349 173 34 chr5 15341273 15341806 -184288344 - L2 LINE L2 -1066 2248 1642 2266 235 113 33 chr5 15342041 15342825 -184287325 - L1ME1 LINE L1 -5 6161 5315 287 262 134 55 chr5 15342860 15343024 -184287126 - L1MD2 LINE L1 -172 6187 6011 299 294 28 14 chr5 15343080 15343223 -184286927 - L1ME1 LINE L1 -1022 5124 4980 989 264 56 56 chr5 15343382 15343845 -184286305 + MLT1C LTR MaLR 1 463 -4 1023 193 14 41 chr5 15343930 15344148 -184286002 - AluJo SINE Alu -12 300 89 7601 204 29 16 chr5 15344459 15345155 -184284995 + L1PB4 LINE L1 3632 4317 -1839 1455 97 0 5 chr5 15345155 15345362 -184284788 + AluY SINE Alu 106 311 0 7601 204 29 16 chr5 15345362 15347159 -184282991 + L1PB4 LINE L1 4317 6156 0 2711 120 0 0 chr5 15347173 15347574 -184282576 + L1MA1 LINE L1 5428 5828 -474 328 62 0 0 chr5 15347574 15347622 -184282528 + Alu SINE Alu 253 300 0 3082 97 43 7 chr5 15347649 15348111 -184282039 + L1MA1 LINE L1 5819 6297 -5 2222 185 21 19 chr5 15348633 15349098 -184281052 + L1MC1 LINE L1 5458 5923 -410 1405 189 81 39 chr5 15349098 15349130 -184281020 - MER7A DNA MER2_type -2692 346 317 2272 122 18 52 chr5 15349130 15349516 -184280634 - THE1C LTR MaLR -2 373 1 1405 189 81 39 chr5 15349516 15349816 -184280334 - MER7A DNA MER2_type -2721 317 2 1305 132 4 33 chr5 15349820 15350062 -184280088 + L1MC1 LINE L1 5925 6159 -174 1618 176 0 17 chr5 15350081 15350371 -184279779 - AluSx SINE Alu -26 286 2 1986 145 3 0 chr5 15350381 15350677 -184279473 - AluSx SINE Alu -15 297 1 756 210 11 54 chr5 15350677 15350863 -184279287 + L1MC1 LINE L1 6155 6332 -1 444 285 133 67 chr5 15351207 15351568 -184278582 - L2 LINE L2 -9 3304 2920 522 298 123 52 chr5 15351610 15351936 -184278214 - L2 LINE L2 -528 2786 2438 1448 249 78 42 chr5 15352009 15352508 -184277642 + LTR40a LTR ERVL 3 519 0 180 321 25 37 chr5 15352875 15352956 -184277194 + MIR SINE MIR 37 116 -92 2096 182 50 66 chr5 15352959 15353229 -184276921 - MER67D LTR ERV1 0 514 254 2054 106 48 10 chr5 15353229 15353521 -184276629 - AluSx SINE Alu -9 303 1 2096 182 50 66 chr5 15353521 15353767 -184276383 - MER67D LTR ERV1 -260 254 6 274 130 338 13 chr5 15354587 15354664 -184275486 - MER41A-int LTR ERV1 -5844 102 1 3846 71 29 20 chr5 15354664 15355213 -184274937 - MER41A LTR ERV1 0 554 1 226 265 20 0 chr5 15355999 15356048 -184274102 + MLT1E2 LTR MaLR 1 50 -574 1713 245 62 29 chr5 15356086 15356571 -184273579 + MLT1E2 LTR MaLR 117 617 -9 1011 268 56 20 chr5 15357317 15357732 -184272418 + MLT2F LTR ERVL 67 541 -122 276 179 64 0 chr5 15358077 15358155 -184271995 + (TA)n Simple_repeat Simple_repeat 2 84 0 235 289 44 0 chr5 15358155 15358245 -184271905 + L1MC4 LINE L1 6609 6702 -1340 320 341 7 22 chr5 15358333 15358471 -184271679 + MLT1I LTR MaLR 97 232 -177 333 245 0 43 chr5 15358915 15359009 -184271141 - L1MC4 LINE L1 -1339 6703 6614 228 239 28 0 chr5 15359019 15359090 -184271060 - L1MC3 LINE L1 -1139 6646 6574 321 270 0 73 chr5 15359144 15359281 -184270869 - L1MC4 LINE L1 -1333 6709 6583 320 289 0 11 chr5 15359322 15359412 -184270738 + L1MC4 LINE L1 6615 6703 -1339 315 0 0 0 chr5 15359412 15359447 -184270703 + (TA)n Simple_repeat Simple_repeat 2 36 0 338 346 6 19 chr5 15359900 15360056 -184270094 - MLT1I LTR MaLR -177 232 79 225 0 0 0 chr5 15360212 15360237 -184269913 + (TAGG)n Simple_repeat Simple_repeat 3 27 0 2580 190 91 12 chr5 15360238 15360733 -184269417 - MLT2B3 LTR ERVL -19 535 2 23 33 0 0 chr5 15360962 15360992 -184269158 + AT_rich Low_complexity Low_complexity 1 30 0 521 219 16 8 chr5 15361497 15361625 -184268525 - L1MB7 LINE L1 -23 6161 6033 6444 106 19 11 chr5 15362348 15362688 -184267462 + L1PA8 LINE L1 4360 4696 -1450 315 0 0 0 chr5 15362688 15362723 -184267427 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6444 106 19 11 chr5 15362723 15363406 -184266744 + L1PA8 LINE L1 4696 5391 -755 4946 67 6 21 chr5 15363409 15363611 -184266539 + L1PA8 LINE L1 5509 5712 -460 1891 146 45 0 chr5 15363611 15363898 -184266252 - AluSx SINE Alu -12 300 1 4946 67 6 21 chr5 15363898 15364365 -184265785 + L1PA8 LINE L1 5712 6168 -4 601 305 110 64 chr5 15364554 15365248 -184264902 + L2 LINE L2 2360 3086 -227 1568 229 24 41 chr5 15365261 15365676 -184264474 - LTR52 LTR ERVL -13 408 1 336 304 41 50 chr5 15365676 15365896 -184264254 + L2 LINE L2 3096 3313 0 21 36 0 0 chr5 15366088 15366116 -184264034 + AT_rich Low_complexity Low_complexity 1 28 0 407 207 47 98 chr5 15366451 15366644 -184263506 + LTR37B LTR ERV1 80 262 -206 492 231 32 26 chr5 15366758 15366914 -184263236 + LTR37B LTR ERV1 311 467 -1 5609 163 20 21 chr5 15367995 15369182 -184260968 - L1MA5 LINE L1 -6 6294 5108 1845 122 0 0 chr5 15369182 15369436 -184260714 - AluSg SINE Alu -10 300 47 5609 163 20 21 chr5 15369436 15369862 -184260288 - L1MA5 LINE L1 -1192 5108 4683 22 99 0 0 chr5 15370630 15370701 -184259449 + AT_rich Low_complexity Low_complexity 1 71 0 2026 175 39 3 chr5 15371388 15371770 -184258380 + MSTD LTR MaLR 1 396 0 23 0 0 0 chr5 15371936 15371959 -184258191 + AT_rich Low_complexity Low_complexity 1 23 0 552 256 142 21 chr5 15372041 15372322 -184257828 + MER46C DNA MER2_type 18 332 -6 23 54 0 0 chr5 15372342 15372379 -184257771 + AT_rich Low_complexity Low_complexity 1 37 0 302 328 118 20 chr5 15372718 15372913 -184257237 + L1ME LINE L1 12 225 -5845 314 289 6 96 chr5 15373365 15373531 -184256619 + L1ME LINE L1 328 478 -5592 933 261 89 66 chr5 15373682 15374716 -184255434 + L1ME LINE L1 482 1655 -4425 242 89 63 25 chr5 15374716 15374795 -184255355 + (TA)n Simple_repeat Simple_repeat 1 82 0 334 132 66 32 chr5 15374895 15375317 -184254833 + (CATATA)n Simple_repeat Simple_repeat 1 436 0 323 122 92 6 chr5 15375317 15375481 -184254669 + (TA)n Simple_repeat Simple_repeat 2 179 0 914 249 100 39 chr5 15375555 15375965 -184254185 + L1ME LINE L1 3269 3703 -2377 219 69 0 0 chr5 15375965 15375994 -184254156 + (CA)n Simple_repeat Simple_repeat 2 30 0 917 247 75 25 chr5 15376960 15377239 -184252911 + MLT1H LTR MaLR 238 530 -19 745 235 94 0 chr5 15377859 15378072 -184252078 + MER33 DNA MER1_type 1 233 -91 302 259 38 84 chr5 15378624 15378755 -184251395 + L2 LINE L2 3179 3303 -10 251 294 49 0 chr5 15379435 15379537 -184250613 - L1MC4 LINE L1 -175 7867 7761 996 194 108 108 chr5 15379542 15379617 -184250533 - MLT1E2 LTR MaLR 0 626 552 5663 114 45 0 chr5 15379617 15380647 -184249503 - L1PA15 LINE L1 0 6165 5128 996 194 108 108 chr5 15380647 15381061 -184249089 - MLT1E2 LTR MaLR -73 553 137 372 272 80 34 chr5 15381199 15381438 -184248712 - L1MC5 LINE L1 -389 7572 7323 427 286 18 41 chr5 15381636 15381856 -184248294 - L1MC5 LINE L1 -784 7177 6963 2549 69 0 0 chr5 15381872 15382176 -184247974 - AluY SINE Alu -7 304 1 335 321 177 9 chr5 15382754 15382969 -184247181 - HAL1b LINE L1 -620 728 478 1120 170 25 23 chr5 15382977 15383297 -184246853 - THE1C LTR MaLR 0 375 1 342 301 109 60 chr5 15383354 15383784 -184246366 - HAL1b LINE L1 -954 1343 12 1676 166 16 29 chr5 15384166 15384479 -184245671 - AluJb SINE Alu -3 309 1 189 0 0 0 chr5 15384486 15384507 -184245643 + (T)n Simple_repeat Simple_repeat 1 21 0 1126 269 52 3 chr5 15385098 15385571 -184244579 + MLT1H1 LTR MaLR 1 555 0 289 267 29 9 chr5 15385574 15385679 -184244471 + MLT1H1-int LTR MaLR 4 110 -1261 * 331 293 0 28 chr5 15385660 15385766 -184244384 + MLT1H1-int LTR MaLR 413 515 -856 5214 117 22 16 chr5 15385851 15386665 -184243485 - L1PA11 LINE L1 0 6174 5356 5056 134 29 1 chr5 15386666 15387516 -184242634 + L1PA11 LINE L1 4469 5342 -804 573 266 32 48 chr5 15387563 15387688 -184242462 - MER20 DNA MER1_type 0 219 96 2705 165 18 8 chr5 15387688 15388178 -184241972 + LOR1a LTR ERV1 1 495 -2 573 266 32 48 chr5 15388178 15388240 -184241910 - MER20 DNA MER1_type -123 96 35 661 128 0 0 chr5 15388504 15388598 -184241552 + L1P LINE L1 4508 4601 -1545 2268 95 0 3 chr5 15388610 15388904 -184241246 + AluSg SINE Alu 17 309 -1 238 268 78 56 chr5 15389438 15389580 -184240570 + MLT1H1-int LTR MaLR 1197 1341 -30 1028 296 71 21 chr5 15389608 15390131 -184240019 + MLT1H1 LTR MaLR 1 555 0 187 364 0 0 chr5 15390299 15390365 -184239785 + L3 LINE CR1 649 714 -863 245 392 31 31 chr5 15390657 15390884 -184239266 - MIR SINE MIR -30 232 6 2743 16 7 0 chr5 15392091 15392399 -184237751 + AluY SINE Alu 1 310 -1 276 301 62 9 chr5 15393201 15393314 -184236836 + MIR SINE MIR 78 196 -66 1665 192 34 3 chr5 15393921 15394264 -184235886 + MLT2C1 LTR ERVL 1 425 -39 696 24 0 0 chr5 15394489 15394571 -184235579 + (CA)n Simple_repeat Simple_repeat 1 82 0 910 193 10 40 chr5 15394596 15394798 -184235352 - MSTC LTR MaLR -202 226 31 225 245 20 0 chr5 15394990 15395039 -184235111 + L2 LINE L2 3241 3290 -23 186 189 0 0 chr5 15396253 15396290 -184233860 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 228 159 87 58 chr5 15397016 15397085 -184233065 + L2 LINE L2 3242 3312 -1 726 271 143 31 chr5 15397860 15398412 -184231738 + MLT1G LTR MaLR 13 583 -7 184 250 0 67 chr5 15398551 15398611 -184231539 - MER5B DNA MER1_type -120 58 3 833 143 0 71 chr5 15399581 15399749 -184230401 - MSTB2 LTR MaLR -43 414 259 294 171 55 0 chr5 15399856 15399926 -184230224 - MSTB2 LTR MaLR -350 85 3 704 269 122 0 chr5 15399928 15400125 -184230025 + MER58A DNA MER1_type 1 221 -3 1563 252 78 52 chr5 15400730 15401330 -184228820 + MLT1E2 LTR MaLR 1 618 -8 441 188 26 60 chr5 15401345 15401462 -184228688 + MIR SINE MIR 106 218 -44 2264 168 2 10 chr5 15401888 15402063 -184228087 + MLT1B LTR MaLR 1 176 -214 2041 113 14 3 chr5 15402063 15402347 -184227803 + AluSx SINE Alu 1 287 -25 901 29 50 7 chr5 15402348 15402487 -184227663 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 2264 168 2 10 chr5 15402487 15402702 -184227448 + MLT1B LTR MaLR 175 390 0 1641 211 63 41 chr5 15404599 15405091 -184225059 - MLT1D LTR MaLR 0 505 3 23 0 0 0 chr5 15407184 15407207 -184222943 + AT_rich Low_complexity Low_complexity 1 23 0 490 297 44 29 chr5 15407349 15407696 -184222454 + L1ME3A LINE L1 2932 3305 -2841 2167 186 29 66 chr5 15407701 15408228 -184221922 - MLT2B2 LTR ERVL -8 507 1 393 211 108 58 chr5 15408484 15408707 -184221443 + L1ME3A LINE L1 3599 3832 -2314 4369 241 58 72 chr5 15408830 15411163 -184218987 + L1PA16 LINE L1 3287 5575 -591 2637 146 81 6 chr5 15411172 15411665 -184218485 + L1PA16 LINE L1 5637 6166 0 1614 196 17 8 chr5 15411665 15412020 -184218130 + L1MB4 LINE L1 5815 6179 -1 349 300 141 7 chr5 15412185 15412462 -184217688 + L1ME3A LINE L1 4514 4827 -1319 495 0 0 0 chr5 15412520 15412575 -184217575 + (CA)n Simple_repeat Simple_repeat 2 56 0 429 313 72 16 chr5 15412603 15412855 -184217295 + L1ME3A LINE L1 5039 5298 -848 2610 105 8 0 chr5 15413021 15413382 -184216768 + THE1B LTR MaLR 1 364 0 332 249 100 53 chr5 15413420 15413621 -184216529 + L1ME3A LINE L1 5591 5810 -360 378 315 11 11 chr5 15413621 15413799 -184216351 - MER5B DNA MER1_type 0 178 1 332 249 100 53 chr5 15413799 15413878 -184216272 + L1ME3A LINE L1 5810 5884 -286 729 191 33 16 chr5 15414142 15414325 -184215825 - L1MA6 LINE L1 -3 6297 6112 387 0 0 0 chr5 15414660 15414703 -184215447 + (CA)n Simple_repeat Simple_repeat 1 43 0 212 282 35 12 chr5 15415295 15415380 -184214770 + (TATG)n Simple_repeat Simple_repeat 4 90 0 240 143 0 0 chr5 15418313 15418355 -184211795 + (TG)n Simple_repeat Simple_repeat 1 42 0 189 74 0 0 chr5 15418358 15418385 -184211765 + (GA)n Simple_repeat Simple_repeat 2 28 0 4118 164 73 32 chr5 15418385 15419257 -184210893 + MER21A LTR ERV1 24 931 0 212 339 139 17 chr5 15419336 15419451 -184210699 - MIR3 SINE MIR -21 187 59 190 356 30 20 chr5 15419649 15419750 -184210400 + L2 LINE L2 2872 2973 -340 755 288 29 34 chr5 15420531 15420948 -184209202 + L1PA16 LINE L1 1 415 -7166 252 287 22 29 chr5 15421763 15421899 -184208251 + L1M2b LINE L1 1279 1413 -5796 7088 224 88 12 chr5 15422327 15423750 -184206400 + L1PA16 LINE L1 2096 3409 -4175 2381 91 3 0 chr5 15423750 15424057 -184206093 + AluY SINE Alu 1 308 -3 7088 224 88 12 chr5 15424057 15426002 -184204148 + L1PA16 LINE L1 3409 5748 -1836 1499 155 99 40 chr5 15426002 15426356 -184203794 + THE1C LTR MaLR 1 375 0 9494 131 16 37 chr5 15426358 15427971 -184202179 + THE1C-int LTR MaLR 3 1580 0 792 174 85 57 chr5 15427971 15428183 -184201967 + THE1C LTR MaLR 1 218 -146 4230 162 53 30 chr5 15428183 15428592 -184201558 + L1PA16 LINE L1 6265 6663 -941 2398 140 57 2 chr5 15428592 15428998 -184201152 - MSTA LTR MaLR 0 428 1 4230 162 53 30 chr5 15428998 15429907 -184200243 + L1PA16 LINE L1 6663 7604 0 832 274 93 17 chr5 15430866 15431286 -184198864 + HsTC2 DNA Tc2 40 491 -1407 409 206 58 26 chr5 15431356 15431511 -184198639 + HsTC2 DNA Tc2 1736 1895 -3 478 234 72 9 chr5 15433384 15433495 -184196655 + MER5C DNA MER1_type 2 119 -205 200 233 183 0 chr5 15433614 15433674 -184196476 + MER5C DNA MER1_type 247 317 -7 189 0 0 0 chr5 15434275 15434296 -184195854 + (CA)n Simple_repeat Simple_repeat 1 21 0 282 116 0 0 chr5 15434350 15434393 -184195757 + (CA)n Simple_repeat Simple_repeat 1 43 0 201 121 0 0 chr5 15434449 15434482 -184195668 + (CA)n Simple_repeat Simple_repeat 1 33 0 204 97 0 0 chr5 15434554 15434585 -184195565 + (CA)n Simple_repeat Simple_repeat 1 31 0 468 314 103 0 chr5 15434838 15435013 -184195137 + MIR SINE MIR 40 232 -30 200 35 35 0 chr5 15435535 15435564 -184194586 + (GA)n Simple_repeat Simple_repeat 2 31 0 1701 166 51 7 chr5 15436169 15436464 -184193686 - AluJb SINE Alu -4 308 1 1530 195 35 27 chr5 15436883 15437063 -184193087 + L1MB8 LINE L1 5462 5639 -527 2161 130 18 50 chr5 15437063 15437462 -184192688 + MLT1B LTR MaLR 5 390 0 1530 195 35 27 chr5 15437462 15437834 -184192316 + L1MB8 LINE L1 5639 6121 -45 699 86 0 0 chr5 15437871 15437964 -184192186 - AluS SINE Alu -212 101 9 1352 134 19 0 chr5 15437964 15438173 -184191977 + AluSg/x SINE Alu 97 309 -3 235 372 28 0 chr5 15440959 15441092 -184189058 - MIR3 SINE MIR -15 193 53 2670 178 46 48 chr5 15441175 15441194 -184188956 + L1MC3 LINE L1 6603 6621 -1164 449 141 26 0 chr5 15441194 15441272 -184188878 + MADE1 DNA Mariner 1 80 0 2670 178 46 48 chr5 15441272 15441966 -184188184 + L1MC3 LINE L1 6621 7315 -470 461 296 0 40 chr5 15441967 15442119 -184188031 + MLT1G1 LTR MaLR 167 312 -283 593 219 18 43 chr5 15442139 15442303 -184187847 - MLT1G1 LTR MaLR -435 160 1 522 325 181 42 chr5 15442303 15443218 -184186932 - L2 LINE L2 -1568 1746 704 276 239 86 129 chr5 15444019 15444274 -184185876 - L2 LINE L2 -57 3256 3013 722 250 128 76 chr5 15444713 15445245 -184184905 - MLT1F1 LTR MaLR -4 563 10 2286 128 5 16 chr5 15446885 15447253 -184182897 - THE1B LTR MaLR 0 364 1 1367 159 29 40 chr5 15447253 15447530 -184182620 - MER50 LTR ERV1 -28 706 433 1237 129 36 18 chr5 15447524 15447749 -184182401 - MER50 LTR ERV1 -505 229 1 * 386 244 79 55 chr5 15447836 15448000 -184182150 - MLT1H LTR MaLR 0 549 382 744 212 139 124 chr5 15448040 15448516 -184181634 + MER21B LTR ERV1 9 491 -372 3538 268 33 32 chr5 15448538 15450615 -184179535 + L1M4c LINE L1 48 1976 -5192 1921 163 78 3 chr5 15450926 15451287 -184178863 + MLT1B LTR MaLR 1 388 -2 1199 94 49 67 chr5 15451381 15451605 -184178545 + MER50 LTR ERV1 1 220 -514 1078 103 62 36 chr5 15451721 15451915 -184178235 + MER50 LTR ERV1 22 220 -514 1428 124 3 78 chr5 15451917 15452199 -184177951 + MER50 LTR ERV1 437 697 -37 1144 266 43 26 chr5 15452984 15453405 -184176745 - LTR16A LTR ERVL -9 441 14 258 353 37 20 chr5 15453872 15454172 -184175978 - HERV16 LTR ERVL -764 5000 4696 1261 365 51 29 chr5 15454265 15455801 -184174349 - HERV16 LTR ERVL -1206 4558 2988 41122 30 22 1 chr5 15456046 15462075 -184168075 + L1HS LINE L1 1 6154 -1 306 292 110 38 chr5 15462078 15462287 -184167863 + L1M4c LINE L1 3006 3229 -3940 1971 296 69 36 chr5 15462479 15463538 -184166612 - HERV16 LTR ERVL -3710 1286 193 263 301 69 45 chr5 15463585 15463837 -184166313 - LTR16A LTR ERVL -139 311 61 22 35 0 0 chr5 15464178 15464207 -184165943 + AT_rich Low_complexity Low_complexity 1 29 0 241 356 69 20 chr5 15464432 15464533 -184165617 + L2 LINE L2 3161 3266 -6 572 244 199 42 chr5 15465026 15465382 -184164768 + MLT1J LTR MaLR 53 464 -47 1625 223 61 51 chr5 15466283 15466790 -184163360 - LTR40a LTR ERVL -7 512 1 2321 56 0 11 chr5 15466834 15467205 -184162945 + AluY SINE Alu 1 368 0 727 204 50 0 chr5 15467205 15467386 -184162764 + MER3 DNA MER1_type 19 208 -1 1614 215 33 62 chr5 15467700 15468220 -184161930 - MLT1D LTR MaLR 0 505 1 754 328 67 51 chr5 15468275 15468807 -184161343 - L2 LINE L2 -82 3231 2709 1896 155 0 13 chr5 15468807 15469111 -184161039 - AluSx SINE Alu -7 305 6 754 328 67 51 chr5 15469111 15469564 -184160586 - L2 LINE L2 -604 2709 2210 300 53 0 0 chr5 15469564 15469602 -184160548 + (TA)n Simple_repeat Simple_repeat 2 39 0 754 328 67 51 chr5 15469602 15469780 -184160370 - L2 LINE L2 -1103 2210 2036 1548 129 14 7 chr5 15469780 15470059 -184160091 + L1MA7 LINE L1 6011 6291 0 3777 170 7 3 chr5 15470064 15470783 -184159367 - L1PA15 LINE L1 -2026 4120 3399 5440 162 20 11 chr5 15470785 15471272 -184158878 + L1PA15 LINE L1 4153 4634 -1531 1598 188 67 0 chr5 15471272 15471554 -184158596 + AluSx SINE Alu 1 301 -11 5440 162 20 11 chr5 15471554 15472935 -184157215 + L1PA15 LINE L1 4634 6034 -131 1824 126 22 7 chr5 15472939 15473210 -184156940 + AluSx SINE Alu 1 275 -37 417 103 0 15 chr5 15473210 15473278 -184156872 + L1PA15 LINE L1 6092 6158 -7 216 216 0 0 chr5 15473402 15473453 -184156697 + (TA)n Simple_repeat Simple_repeat 1 51 0 717 308 152 38 chr5 15473470 15474055 -184156095 - L2 LINE L2 -1268 2046 1395 457 298 62 19 chr5 15474398 15474559 -184155591 - MIR SINE MIR -74 188 21 1889 155 15 48 chr5 15476535 15476843 -184153307 - MLT1B LTR MaLR 0 390 96 2140 109 0 0 chr5 15476843 15477127 -184153023 + AluSg SINE Alu 7 290 -20 1889 155 15 48 chr5 15477127 15477212 -184152938 - MLT1B LTR MaLR -294 96 10 3430 25 5 0 chr5 15477216 15477617 -184152533 + L1PA3 LINE L1 5743 6145 -10 188 308 154 0 chr5 15477889 15478006 -184152144 - L2 LINE L2 -242 3030 2896 25 0 0 0 chr5 15479056 15479081 -184151069 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 15479297 15479325 -184150825 + AT_rich Low_complexity Low_complexity 1 28 0 28 48 0 0 chr5 15480264 15480306 -184149844 + AT_rich Low_complexity Low_complexity 1 42 0 182 171 98 0 chr5 15480498 15480539 -184149611 - L2 LINE L2 -5 3267 3223 25 65 0 0 chr5 15481330 15481376 -184148774 + AT_rich Low_complexity Low_complexity 1 46 0 208 182 15 45 chr5 15481564 15481630 -184148520 + A-rich Low_complexity Low_complexity 1 64 0 218 240 219 0 chr5 15482547 15482643 -184147507 - MIR SINE MIR -24 238 122 331 319 83 13 chr5 15482922 15483111 -184147039 + MIR SINE MIR 13 214 -48 338 265 0 13 chr5 15483935 15484086 -184146064 + (CATATA)n Simple_repeat Simple_repeat 6 154 0 32 0 0 0 chr5 15484302 15484334 -184145816 + AT_rich Low_complexity Low_complexity 1 32 0 1338 41 18 0 chr5 15485916 15486085 -184144065 + L1PA4 LINE L1 5984 6155 0 1581 292 143 8 chr5 15486170 15486938 -184143212 + L2 LINE L2 35 906 -2408 766 149 6 48 chr5 15486954 15486986 -184143164 + MLT1A2 LTR MaLR 2 34 -340 2367 137 18 0 chr5 15486986 15487372 -184142778 - L1PA11 LINE L1 -5 6169 5777 766 149 6 48 chr5 15487372 15487507 -184142643 + MLT1A2 LTR MaLR 34 162 -212 339 25 0 0 chr5 15487525 15487565 -184142585 + (TC)n Simple_repeat Simple_repeat 2 41 0 1734 194 38 29 chr5 15487710 15488258 -184141892 - MLT2A2 LTR ERVL 0 554 1 377 197 0 0 chr5 15488258 15488329 -184141821 + MLT1A2 LTR MaLR 302 372 -2 354 298 33 13 chr5 15488334 15488485 -184141665 + L2 LINE L2 920 1073 -2241 1517 272 103 28 chr5 15488561 15488629 -184141521 + L2 LINE L2 1833 1895 -1419 213 39 0 0 chr5 15488629 15488655 -184141495 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1517 272 103 28 chr5 15488655 15489219 -184140931 + L2 LINE L2 1895 2512 -802 234 0 0 0 chr5 15490077 15490103 -184140047 + (A)n Simple_repeat Simple_repeat 1 26 0 306 73 0 0 chr5 15490253 15490294 -184139856 + (TG)n Simple_repeat Simple_repeat 1 41 0 196 231 83 37 chr5 15490506 15490614 -184139536 + L2 LINE L2 2975 3087 -226 1327 220 52 65 chr5 15490620 15491084 -184139066 + MLT2C2 LTR ERVL 7 464 0 287 159 0 0 chr5 15491353 15491411 -184138739 + MLT2C1 LTR ERVL 350 397 0 499 288 35 53 chr5 15491574 15491800 -184138350 - MIR SINE MIR -36 226 5 215 171 0 0 chr5 15493805 15493840 -184136310 + L3 LINE CR1 932 966 -611 407 284 32 13 chr5 15494077 15494232 -184135918 + MER90 LTR ERV1 404 561 -14 425 257 151 0 chr5 15494294 15494446 -184135704 - MER5A DNA MER1_type -6 183 9 189 336 217 14 chr5 15494462 15494605 -184135545 + MER5B DNA MER1_type 1 172 -6 404 308 60 33 chr5 15496768 15497067 -184133083 + L1ME4a LINE L1 5078 5384 -762 607 317 35 16 chr5 15497152 15497524 -184132626 + L1ME4a LINE L1 5483 5861 -260 729 197 58 24 chr5 15498026 15498313 -184131837 - MLT1A2 LTR MaLR -1 373 43 1718 172 35 3 chr5 15498411 15498696 -184131454 + AluJb SINE Alu 1 294 -18 342 0 0 0 chr5 15498703 15498741 -184131409 + (TA)n Simple_repeat Simple_repeat 2 39 0 206 317 79 10 chr5 15499454 15499555 -184130595 + MIR SINE MIR 42 149 -59 344 214 0 24 chr5 15499594 15499678 -184130472 + L1ME4a LINE L1 5960 6041 -80 24 67 0 0 chr5 15499793 15499838 -184130312 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 15499998 15500019 -184130131 + AT_rich Low_complexity Low_complexity 1 21 0 1622 194 56 31 chr5 15500445 15500801 -184129349 + MLT1A1 LTR MaLR 1 365 0 2087 178 34 15 chr5 15501113 15501509 -184128641 - L1MA8 LINE L1 0 6291 5904 2601 145 9 23 chr5 15501509 15501943 -184128207 + MSTC LTR MaLR 1 428 0 2087 178 34 15 chr5 15501943 15502000 -184128150 - L1MA8 LINE L1 -387 5904 5826 216 0 0 0 chr5 15502000 15502024 -184128126 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2087 178 34 15 chr5 15502024 15502035 -184128115 - L1MA8 LINE L1 -465 5826 5817 * 5277 141 23 18 chr5 15502029 15502711 -184127439 - L1PA15 LINE L1 -5 6811 6134 2192 112 36 7 chr5 15502711 15503015 -184127135 - AluSq SINE Alu 0 313 1 5277 141 23 18 chr5 15503015 15504322 -184125828 - L1PA15 LINE L1 -682 6134 4829 5638 217 11 60 chr5 15504333 15505402 -184124748 - L1PA15 LINE L1 -3078 3719 2599 2282 87 3 0 chr5 15505402 15505689 -184124461 + AluY SINE Alu 1 288 -23 5638 217 11 60 chr5 15505689 15507123 -184123027 - L1PA15 LINE L1 -4198 2599 1332 2111 291 19 26 chr5 15507200 15507929 -184122221 - L1PA15 LINE L1 -6063 724 1 9852 174 24 66 chr5 15507945 15508453 -184121697 - L1MA8 LINE L1 -478 5822 5294 2468 104 14 14 chr5 15508453 15508808 -184121342 - THE1A LTR MaLR 0 355 1 9852 174 24 66 chr5 15508808 15510603 -184119547 - L1MA8 LINE L1 -1006 5294 3518 1188 65 19 0 chr5 15510603 15510801 -184119349 - AluY SINE Alu 0 327 127 9852 174 24 66 chr5 15510801 15511402 -184118748 - L1MA8 LINE L1 -2782 3518 2893 2115 212 38 26 chr5 15511403 15511983 -184118167 + MER49 LTR ERV1 180 766 -157 680 255 0 5 chr5 15512122 15512306 -184117844 - L1MA8 LINE L1 -3251 2895 2713 1044 230 119 28 chr5 15512523 15512704 -184117446 + MSTD LTR MaLR 1 164 -232 2009 130 29 35 chr5 15512704 15513080 -184117070 - THE1C LTR MaLR 0 375 2 1044 230 119 28 chr5 15513080 15513259 -184116891 + MSTD LTR MaLR 164 394 -2 6404 228 62 35 chr5 15513261 15514833 -184115317 + MSTD-int LTR MaLR 2 1623 -112 2310 98 0 7 chr5 15514833 15515140 -184115010 - AluSq SINE Alu -8 305 1 6404 228 62 35 chr5 15515140 15515257 -184114893 + MSTD-int LTR MaLR 1623 1735 0 910 210 55 53 chr5 15515257 15515599 -184114551 + MLT1A1 LTR MaLR 1 429 -3 280 319 203 12 chr5 15516159 15516322 -184113828 + MIR SINE MIR 37 230 -32 931 234 152 34 chr5 15516676 15517294 -184112856 + LTR50 LTR ERVL 4 791 -4 334 197 0 0 chr5 15517370 15517431 -184112719 - MER81 DNA DNA -1 113 53 1305 176 119 62 chr5 15517696 15518065 -184112085 - MLT1B LTR MaLR 0 390 1 26 0 0 0 chr5 15518118 15518144 -184112006 + AT_rich Low_complexity Low_complexity 1 26 0 1006 302 40 3 chr5 15519244 15519644 -184110506 + L2 LINE L2 2646 3061 -252 200 280 27 40 chr5 15520136 15520211 -184109939 + L2 LINE L2 2719 2792 -522 278 294 20 0 chr5 15522006 15522108 -184108042 + (TA)n Simple_repeat Simple_repeat 1 104 0 1522 17 0 0 chr5 15522419 15522592 -184107558 - L1PA3 LINE L1 -4 6151 5979 249 295 95 42 chr5 15522898 15523088 -184107062 - L2 LINE L2 -64 3249 3050 222 150 0 0 chr5 15524417 15524457 -184105693 + (TG)n Simple_repeat Simple_repeat 2 41 0 359 280 99 74 chr5 15525336 15525442 -184104708 + MIR SINE MIR 14 116 -146 1989 149 7 0 chr5 15525442 15525738 -184104412 - AluSx SINE Alu -14 298 1 359 280 99 74 chr5 15525738 15525874 -184104276 + MIR SINE MIR 116 262 0 281 306 127 8 chr5 15526998 15527132 -184103018 + LTR16A LTR ERVL 1 150 -300 304 333 175 0 chr5 15527133 15527253 -184102897 + L2 LINE L2 2449 2589 -725 715 207 36 72 chr5 15527254 15527476 -184102674 + MER20 DNA MER1_type 1 214 -5 1051 261 157 28 chr5 15527478 15528111 -184102039 + L2 LINE L2 2580 3313 0 701 235 104 0 chr5 15528551 15528734 -184101416 - MER67D LTR ERV1 -3 511 310 1215 176 19 85 chr5 15528788 15529107 -184101043 - MER67D LTR ERV1 -203 311 14 1413 208 30 30 chr5 15529323 15529684 -184100466 + MLT1A1 LTR MaLR 5 365 0 194 62 31 0 chr5 15530461 15530493 -184099657 + (TA)n Simple_repeat Simple_repeat 2 34 0 201 147 0 0 chr5 15531384 15531418 -184098732 + (TA)n Simple_repeat Simple_repeat 1 34 0 249 295 16 33 chr5 15532324 15532446 -184097704 - MLT1H LTR MaLR -19 530 411 1278 315 116 34 chr5 15533183 15534391 -184095759 - L2 LINE L2 -588 2726 1420 2607 224 43 87 chr5 15534690 15535657 -184094493 + L1M4 LINE L1 5 929 -5613 468 106 8 3 chr5 15535667 15535903 -184094247 + AluY SINE Alu 1 300 -11 2207 220 56 58 chr5 15536010 15536241 -184093909 + L1M4 LINE L1 975 1205 -5441 4353 63 4 0 chr5 15536241 15536798 -184093352 - L1PA8 LINE L1 -8 6164 5606 2207 220 56 58 chr5 15536798 15537537 -184092613 + L1M4 LINE L1 1205 1943 -4703 1265 303 38 28 chr5 15537537 15537939 -184092211 + ERVL LTR ERVL 1726 2135 -2861 2028 118 55 30 chr5 15537939 15538305 -184091845 - THE1C LTR MaLR 0 375 1 1265 303 38 28 chr5 15538305 15538403 -184091747 + ERVL LTR ERVL 2135 2231 -2765 541 329 52 49 chr5 15538404 15539176 -184090974 + ERVL LTR ERVL 4603 5376 -388 635 259 99 12 chr5 15539196 15539439 -184090711 + LTR16B LTR ERVL 189 452 -12 329 310 108 8 chr5 15540927 15541056 -184089094 - MIR SINE MIR -74 188 47 2602 141 30 2 chr5 15541685 15542154 -184087996 + L1MB2 LINE L1 5688 6169 -2 2139 126 51 28 chr5 15543296 15543652 -184086498 + THE1B LTR MaLR 1 364 0 11193 90 37 3 chr5 15543652 15545180 -184084970 + THE1B-int LTR MaLR 1 1580 0 2260 103 60 20 chr5 15545180 15545530 -184084620 + THE1B LTR MaLR 1 364 0 243 0 0 0 chr5 15546222 15546249 -184083901 + (A)n Simple_repeat Simple_repeat 1 27 0 360 64 0 0 chr5 15546399 15546446 -184083704 + (TG)n Simple_repeat Simple_repeat 1 47 0 196 231 83 37 chr5 15546658 15546766 -184083384 + L2 LINE L2 2975 3087 -226 1327 220 52 65 chr5 15546772 15547236 -184082914 + MLT2C2 LTR ERVL 7 464 0 287 159 0 0 chr5 15547505 15547563 -184082587 + MLT2C1 LTR ERVL 350 397 0 499 288 35 53 chr5 15547726 15547952 -184082198 - MIR SINE MIR -36 226 5 215 171 0 0 chr5 15549957 15549992 -184080158 + L3 LINE CR1 932 966 -611 407 284 32 13 chr5 15550229 15550384 -184079766 + MER90 LTR ERV1 404 561 -14 425 257 151 0 chr5 15550446 15550598 -184079552 - MER5A DNA MER1_type -6 183 9 189 336 217 14 chr5 15550614 15550757 -184079393 + MER5B DNA MER1_type 1 172 -6 404 308 60 33 chr5 15552918 15553217 -184076933 + L1ME4a LINE L1 5078 5384 -762 607 317 35 16 chr5 15553302 15553674 -184076476 + L1ME4a LINE L1 5483 5861 -260 769 190 58 24 chr5 15554172 15554459 -184075691 - MLT1A2 LTR MaLR -1 373 43 1727 171 35 3 chr5 15554557 15554843 -184075307 + AluJb SINE Alu 1 295 -17 270 0 0 0 chr5 15554850 15554880 -184075270 + (TA)n Simple_repeat Simple_repeat 2 31 0 205 307 79 10 chr5 15555593 15555694 -184074456 + MIR SINE MIR 42 149 -59 344 214 0 24 chr5 15555733 15555817 -184074333 + L1ME4a LINE L1 5960 6041 -80 24 67 0 0 chr5 15555932 15555977 -184074173 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 15556137 15556158 -184073992 + AT_rich Low_complexity Low_complexity 1 21 0 1638 191 56 31 chr5 15556584 15556940 -184073210 + MLT1A1 LTR MaLR 1 365 0 2106 180 32 15 chr5 15557252 15557649 -184072501 - L1MA8 LINE L1 0 6291 5902 2564 150 9 23 chr5 15557649 15558083 -184072067 + MSTC LTR MaLR 1 428 0 2106 180 32 15 chr5 15558083 15558140 -184072010 - L1MA8 LINE L1 -389 5902 5826 216 0 0 0 chr5 15558140 15558164 -184071986 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2106 180 32 15 chr5 15558164 15558175 -184071975 - L1MA8 LINE L1 -465 5826 5817 * 5346 136 23 18 chr5 15558169 15558851 -184071299 - L1PA15 LINE L1 -5 6811 6134 2192 112 36 7 chr5 15558851 15559155 -184070995 - AluSq SINE Alu 0 313 1 5346 136 23 18 chr5 15559155 15560462 -184069688 - L1PA15 LINE L1 -682 6134 4829 5554 225 12 37 chr5 15560473 15561542 -184068608 - L1PA15 LINE L1 -3078 3719 2625 2282 87 3 0 chr5 15561542 15561829 -184068321 + AluY SINE Alu 1 288 -23 5554 225 12 37 chr5 15561829 15563213 -184066937 - L1PA15 LINE L1 -4172 2625 1332 2184 291 24 19 chr5 15563290 15564011 -184066139 - L1PA15 LINE L1 -6063 724 1 8898 175 24 16 chr5 15564027 15564535 -184065615 - L1MA8 LINE L1 -478 5822 5320 2484 101 14 14 chr5 15564535 15564890 -184065260 - THE1A LTR MaLR 0 355 1 8898 175 24 16 chr5 15564890 15566685 -184063465 - L1MA8 LINE L1 -980 5320 3494 1188 65 19 0 chr5 15566685 15566883 -184063267 - AluY SINE Alu 0 327 127 2050 222 28 8 chr5 15566883 15567486 -184062664 - L1MA8 LINE L1 -2639 3507 2893 2110 209 40 28 chr5 15567487 15568067 -184062083 + MER49 LTR ERV1 180 766 -157 717 245 0 5 chr5 15568206 15568390 -184061760 - L1MA8 LINE L1 -3251 2895 2713 1057 227 119 28 chr5 15568607 15568788 -184061362 + MSTD LTR MaLR 1 164 -232 1996 133 29 35 chr5 15568788 15569164 -184060986 - THE1C LTR MaLR 0 375 2 1057 227 119 28 chr5 15569164 15569343 -184060807 + MSTD LTR MaLR 164 394 -2 6356 233 57 33 chr5 15569345 15570921 -184059229 + MSTD-int LTR MaLR 2 1622 -113 2380 95 0 6 chr5 15570921 15571236 -184058914 - AluSq SINE Alu 0 313 1 6356 233 57 33 chr5 15571236 15571353 -184058797 + MSTD-int LTR MaLR 1622 1735 0 895 212 55 53 chr5 15571353 15571695 -184058455 + MLT1A1 LTR MaLR 1 429 -3 280 319 203 12 chr5 15572255 15572418 -184057732 + MIR SINE MIR 37 230 -32 935 233 152 34 chr5 15572772 15573390 -184056760 + LTR50 LTR ERVL 4 791 -4 334 197 0 0 chr5 15573466 15573527 -184056623 - MER81 DNA DNA -1 113 53 1305 176 119 62 chr5 15573792 15574161 -184055989 - MLT1B LTR MaLR 0 390 1 26 0 0 0 chr5 15574214 15574240 -184055910 + AT_rich Low_complexity Low_complexity 1 26 0 184 382 0 0 chr5 15575388 15575456 -184054694 + L2 LINE L2 2976 3043 -229 1712 296 131 23 chr5 15575635 15576638 -184053512 - L2 LINE L2 0 3313 2158 828 222 27 40 chr5 15576638 15576863 -184053287 + MER58A DNA MER1_type 3 224 0 1712 296 131 23 chr5 15576863 15576993 -184053157 - L2 LINE L2 -1155 2158 2043 234 250 29 15 chr5 15576996 15577064 -184053086 + L2 LINE L2 3229 3297 -16 2200 97 23 19 chr5 15577120 15577430 -184052720 + AluY SINE Alu 1 311 0 245 319 64 14 chr5 15578218 15578359 -184051791 - MIR SINE MIR -54 208 61 1551 183 134 78 chr5 15579555 15580031 -184050119 + MLT1D LTR MaLR 3 505 0 2394 125 37 0 chr5 15581445 15581821 -184048329 - MLT1B LTR MaLR 0 390 1 381 260 52 26 chr5 15582154 15582308 -184047842 - MER103 DNA DNA -2 164 7 1235 239 66 68 chr5 15582557 15582581 -184047569 + MLT1D LTR MaLR 4 27 -599 450 36 0 0 chr5 15582581 15582637 -184047513 + (CA)n Simple_repeat Simple_repeat 1 56 0 1235 239 66 68 chr5 15582637 15582913 -184047237 + MLT1D LTR MaLR 27 302 -324 1903 124 69 36 chr5 15582913 15583276 -184046874 + THE1C LTR MaLR 1 375 0 10304 117 15 30 chr5 15583276 15584880 -184045270 + THE1C-int LTR MaLR 1 1580 0 2283 127 16 21 chr5 15584880 15585257 -184044893 + THE1C LTR MaLR 1 375 0 1235 239 66 68 chr5 15585257 15585468 -184044682 + MLT1D LTR MaLR 299 626 0 463 223 76 76 chr5 15585861 15586018 -184044132 - L2 LINE L2 -4 3309 3153 1505 206 90 30 chr5 15586058 15586460 -184043690 - MLT1C LTR MaLR -41 426 1 2491 76 19 93 chr5 15586606 15586995 -184043155 + MLT2A1 LTR ERVL 8 357 -87 315 0 0 0 chr5 15586995 15587030 -184043120 + (TG)n Simple_repeat Simple_repeat 2 36 0 2491 76 19 93 chr5 15587030 15587112 -184043038 + MLT2A1 LTR ERVL 357 444 0 324 314 66 15 chr5 15587463 15587600 -184042550 - MIR SINE MIR -72 190 47 227 365 31 0 chr5 15589089 15589185 -184040965 - MIR SINE MIR -108 154 56 238 279 293 7 chr5 15589277 15589424 -184040726 + L2 LINE L2 2203 2391 -923 2225 172 203 20 chr5 15589690 15589926 -184040224 - L1MC3 LINE L1 -26 7759 7568 2430 71 3 0 chr5 15589926 15590223 -184039927 + AluSc SINE Alu 1 298 -11 2225 172 203 20 chr5 15590223 15590596 -184039554 - L1MC3 LINE L1 -217 7568 7038 472 161 54 0 chr5 15590596 15590689 -184039461 + MER4A LTR ERV1 1 98 -566 1648 131 3 77 chr5 15590689 15591062 -184039088 + MER4A LTR ERV1 261 664 0 779 129 29 0 chr5 15591068 15591207 -184038943 - L1MC3 LINE L1 -738 7047 6905 283 263 10 30 chr5 15591451 15591550 -184038600 - MIR SINE MIR -77 185 89 201 39 0 0 chr5 15591590 15591616 -184038534 + (CAGCC)n Simple_repeat Simple_repeat 1 26 0 367 328 63 11 chr5 15592043 15592217 -184037933 + MIR3 SINE MIR 7 189 -19 248 231 77 0 chr5 15592248 15592326 -184037824 + MER112 DNA MER1_type 74 157 -103 475 158 110 24 chr5 15592342 15592469 -184037681 - L1MA8 LINE L1 -6 6285 6148 3737 128 62 3 chr5 15592590 15593058 -184037092 + LTR9 LTR ERV1 1 511 -101 185 0 0 39 chr5 15593058 15593084 -184037066 + (TTCTC)n Simple_repeat Simple_repeat 2 26 0 3737 128 62 3 chr5 15593084 15593193 -184036957 + LTR9 LTR ERV1 511 612 0 297 279 85 0 chr5 15593337 15593442 -184036708 + MIR SINE MIR 47 146 -62 2436 132 108 32 chr5 15593790 15594291 -184035859 + LTR8A LTR ERV1 1 539 -188 1710 165 18 127 chr5 15594347 15594899 -184035251 - LTR22B LTR ERVK 0 492 1 759 149 39 72 chr5 15594899 15595078 -184035072 + LTR8A LTR ERV1 555 727 0 603 204 62 0 chr5 15595402 15595564 -184034586 + MER67C LTR ERV1 1 172 -538 744 176 8 0 chr5 15595564 15595689 -184034461 + AluJo SINE Alu 1 126 -186 2566 158 36 50 chr5 15595704 15596226 -184033924 + MER67C LTR ERV1 160 675 -35 1612 199 38 30 chr5 15596226 15596597 -184033553 - MLT1A2 LTR MaLR 0 374 1 2566 158 36 50 chr5 15596597 15596632 -184033518 + MER67C LTR ERV1 675 709 -1 1605 161 77 51 chr5 15597052 15597405 -184032745 + MSTA LTR MaLR 67 428 0 597 326 59 7 chr5 15597405 15597678 -184032472 - LTR16A1 LTR ERVL -122 335 49 388 268 84 21 chr5 15598103 15598245 -184031905 - MIR SINE MIR -82 180 30 209 255 79 26 chr5 15598282 15598393 -184031757 + MIR SINE MIR 56 144 -64 191 341 35 0 chr5 15599350 15599435 -184030715 - L3 LINE CR1 0 1577 1490 3675 152 6 13 chr5 15599657 15600289 -184029861 - LTR48B LTR ERV1 -16 628 1 186 43 0 0 chr5 15601103 15601126 -184029024 + (TG)n Simple_repeat Simple_repeat 2 24 0 412 272 177 7 chr5 15601160 15601307 -184028843 - MER5A DNA MER1_type -1 188 17 2374 83 0 13 chr5 15601307 15601607 -184028543 - AluY SINE Alu -15 296 1 25 31 0 0 chr5 15602712 15602744 -184027406 + AT_rich Low_complexity Low_complexity 1 32 0 667 275 66 30 chr5 15603490 15603795 -184026355 + MLT1J2 LTR MaLR 6 321 -129 1379 245 58 41 chr5 15604074 15604540 -184025610 + MLT1E2 LTR MaLR 151 624 -2 580 234 71 50 chr5 15604706 15604906 -184025244 + L1MDa LINE L1 449 776 -5764 21 0 0 0 chr5 15605118 15605139 -184025011 + AT_rich Low_complexity Low_complexity 1 21 0 1036 168 0 6 chr5 15606112 15606279 -184023871 + AluJo SINE Alu 125 290 -22 207 0 0 0 chr5 15606692 15606715 -184023435 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1789 216 39 28 chr5 15607133 15607595 -184022555 + MLT1C LTR MaLR 1 467 0 522 218 21 28 chr5 15607637 15607779 -184022371 + L2 LINE L2 2472 2612 -702 780 179 50 0 chr5 15608090 15608256 -184021894 + MER58B DNA MER1_type 157 333 -8 * 1072 311 73 31 chr5 15608255 15608691 -184021459 + MER115 DNA AcHobo 164 623 -70 1927 138 31 56 chr5 15608691 15609047 -184021103 + MER7A DNA MER2_type 2 346 0 1072 311 73 31 chr5 15609047 15609092 -184021058 + MER115 DNA AcHobo 623 665 -28 420 276 120 100 chr5 15609789 15610279 -184019871 - L2 LINE L2 -3 3310 2811 2150 186 94 34 chr5 15610303 15610888 -184019262 - Cheshire DNA MER1_type -19 2401 1782 1051 233 101 3 chr5 15611653 15611941 -184018209 - MLT1E2 LTR MaLR -8 618 303 238 314 0 0 chr5 15612058 15612128 -184018022 - MLT1E1 LTR MaLR -584 70 1 685 176 154 147 chr5 15612750 15613029 -184017121 + LTR8 LTR ERV1 1 281 -446 957 193 65 103 chr5 15613067 15613512 -184016638 + LTR8A LTR ERV1 287 714 -13 24 0 0 0 chr5 15613794 15613818 -184016332 + AT_rich Low_complexity Low_complexity 1 24 0 684 245 77 10 chr5 15614314 15614522 -184015628 - MLT1G LTR MaLR 0 590 369 346 295 0 19 chr5 15615622 15615727 -184014423 + L2 LINE L2 3162 3264 -8 27 0 0 0 chr5 15616475 15616502 -184013648 + AT_rich Low_complexity Low_complexity 1 27 0 538 274 142 47 chr5 15616658 15616997 -184013153 + MLT1J2 LTR MaLR 72 442 -8 227 279 87 19 chr5 15617026 15617130 -184013020 + MIR SINE MIR 117 227 -35 25 51 0 0 chr5 15617236 15617275 -184012875 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr5 15618462 15618487 -184011663 + AT_rich Low_complexity Low_complexity 1 25 0 1352 175 119 26 chr5 15619021 15619409 -184010741 - MLT1C LTR MaLR 0 467 44 1488 236 110 70 chr5 15620520 15621121 -184009029 + MLT1E1 LTR MaLR 1 625 -29 704 276 6 0 chr5 15622077 15622233 -184007917 - MER5A DNA MER1_type -31 158 2 449 269 102 12 chr5 15622468 15622635 -184007515 + MLT1L LTR MaLR 430 611 -4 709 108 0 17 chr5 15623973 15624093 -184006057 + (TTCC)n Simple_repeat Simple_repeat 3 120 0 853 151 0 8 chr5 15624152 15624278 -184005872 + FLAM_C SINE Alu 1 125 -18 1622 118 7 0 chr5 15624522 15624794 -184005356 + L1MA2 LINE L1 6031 6304 0 2168 83 14 3 chr5 15625387 15625675 -184004475 - AluY SINE Alu -20 291 1 207 0 0 0 chr5 15626142 15626165 -184003985 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 2056 189 30 69 chr5 15627107 15627415 -184002735 - MLT1D LTR MaLR 0 505 224 2003 172 12 10 chr5 15627415 15627816 -184002334 - L1MA4 LINE L1 -6 6294 5893 2056 189 30 69 chr5 15627816 15628032 -184002118 - MLT1D LTR MaLR -281 224 1 267 54 0 0 chr5 15629418 15629455 -184000695 + (TG)n Simple_repeat Simple_repeat 2 38 0 216 97 0 0 chr5 15629945 15629976 -184000174 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2422 248 65 16 chr5 15630159 15631064 -183999086 + L1MC3 LINE L1 3884 4833 -1313 1541 130 0 0 chr5 15631044 15631282 -183998868 - L1P4 LINE L1 -452 5716 5479 * 2197 75 0 3 chr5 15631282 15631577 -183998573 + L1PA10 LINE L1 5861 6154 -14 6672 196 54 14 chr5 15631589 15633530 -183996620 + L1MC3 LINE L1 4815 5403 -743 283 191 0 0 chr5 15633530 15633598 -183996552 - LTR66 LTR ERVL -148 462 395 225 116 0 0 chr5 15633561 15633604 -183996546 + LTR66 LTR ERVL 394 436 -174 * 426 145 48 0 chr5 15633619 15633702 -183996448 + L1MC3 LINE L1 6918 7004 -781 * 2014 189 18 73 chr5 15633699 15633970 -183996180 + L1MC3 LINE L1 7220 7442 -343 2035 151 19 24 chr5 15633970 15634347 -183995803 + THE1C LTR MaLR 1 375 0 2014 189 18 73 chr5 15634347 15634674 -183995476 + L1MC3 LINE L1 7442 7785 0 2140 132 48 28 chr5 15634725 15635082 -183995068 + THE1B LTR MaLR 1 364 0 1992 143 6 34 chr5 15635412 15635733 -183994417 + AluSx SINE Alu 1 312 0 817 202 67 29 chr5 15636576 15636784 -183993366 - MER58A DNA MER1_type 0 224 9 200 361 8 54 chr5 15636829 15636959 -183993191 + L2 LINE L2 2938 3061 -211 1398 256 62 22 chr5 15637355 15637904 -183992246 + MLT1F1 LTR MaLR 1 567 0 285 337 43 43 chr5 15637910 15637986 -183992164 - MIR SINE MIR -49 213 138 1700 161 67 78 chr5 15637986 15638422 -183991728 + MSTB1 LTR MaLR 1 431 -1 285 337 43 43 chr5 15638422 15638508 -183991642 - MIR SINE MIR -123 139 51 216 326 134 44 chr5 15640301 15640911 -183989239 - L2 LINE L2 -1291 2023 1359 1906 140 31 0 chr5 15644543 15644835 -183985315 + AluSx SINE Alu 1 301 -11 24 0 0 0 chr5 15645611 15645635 -183984515 + AT_rich Low_complexity Low_complexity 1 24 0 40 21 0 0 chr5 15647386 15647433 -183982717 + AT_rich Low_complexity Low_complexity 1 47 0 3646 98 217 116 chr5 15647837 15649239 -183980911 + pTR5 LTR ERV1 743 2438 0 1540 184 146 82 chr5 15649423 15649944 -183980206 + MLT2B3 LTR ERVL 1 554 0 25 0 0 0 chr5 15650597 15650622 -183979528 + AT_rich Low_complexity Low_complexity 1 25 0 456 279 188 26 chr5 15650970 15651278 -183978872 - L2 LINE L2 0 3313 2956 2917 200 3 2 chr5 15653386 15654021 -183976129 - L1 LINE L1 -1117 5029 4394 364 170 27 125 chr5 15654018 15654130 -183976020 + L1PA16 LINE L1 6057 6157 -9 * 1132 198 46 73 chr5 15654181 15654549 -183975601 + LTR47B LTR ERVL 1 358 -85 2368 97 3 0 chr5 15654586 15654895 -183975255 + AluSx SINE Alu 1 310 -2 362 255 9 19 chr5 15654974 15655080 -183975070 + MIR SINE MIR 31 135 -127 1033 191 84 82 chr5 15656041 15656268 -183973882 + LTR52 LTR ERVL 1 231 -190 1518 64 5 20 chr5 15656268 15656472 -183973678 - L1PA10 LINE L1 -4 6164 5964 1033 191 84 82 chr5 15656472 15656658 -183973492 + LTR52 LTR ERVL 231 415 -6 360 0 0 0 chr5 15656708 15656748 -183973402 + (TTA)n Simple_repeat Simple_repeat 3 42 0 576 62 62 0 chr5 15656748 15656829 -183973321 - L1PA5 LINE L1 -18 6136 6051 641 285 113 88 chr5 15656885 15657947 -183972203 - L1ME LINE L1 -560 5561 4479 24 32 0 0 chr5 15658274 15658305 -183971845 + AT_rich Low_complexity Low_complexity 1 31 0 2318 110 0 0 chr5 15658992 15659293 -183970857 + AluSx SINE Alu 1 301 -11 225 373 60 7 chr5 15659621 15659771 -183970379 - L2 LINE L2 -5 3308 3151 270 0 0 0 chr5 15661554 15661584 -183968566 + (CA)n Simple_repeat Simple_repeat 2 31 0 1534 132 0 0 chr5 15661648 15661868 -183968282 - AluSg/x SINE Alu -10 302 83 488 315 84 60 chr5 15662297 15662748 -183967402 - L2 LINE L2 0 3272 2811 490 272 117 10 chr5 15664976 15665182 -183964968 + MIR SINE MIR 16 243 -19 534 230 105 52 chr5 15665339 15665587 -183964563 + L1MC4a LINE L1 5925 6185 -1623 622 272 24 70 chr5 15665735 15665917 -183964233 - L1MDa LINE L1 -6123 417 259 2323 101 48 31 chr5 15665917 15666275 -183963875 - THE1B LTR MaLR 0 364 1 622 272 24 70 chr5 15666275 15666463 -183963687 - L1MDa LINE L1 -6281 259 64 644 261 55 100 chr5 15666642 15667022 -183963128 - L1MC5 LINE L1 -770 7191 6842 1507 187 21 28 chr5 15667022 15667306 -183962844 - AluJb SINE Alu -26 286 5 644 261 55 100 chr5 15667306 15667474 -183962676 - L1MC5 LINE L1 -1119 6842 6668 1045 269 37 50 chr5 15668108 15668650 -183961500 - L1MC5 LINE L1 -2019 5789 5255 412 271 42 42 chr5 15670137 15670480 -183959670 - MLT1J1 LTR MaLR 0 446 63 1141 212 58 69 chr5 15670979 15671441 -183958709 + LTR16A1 LTR ERVL 1 457 0 210 301 150 9 chr5 15673058 15673171 -183956979 + L2 LINE L2 3185 3313 0 22 0 0 0 chr5 15673227 15673249 -183956901 + AT_rich Low_complexity Low_complexity 1 22 0 210 71 0 0 chr5 15673398 15673426 -183956724 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 1996 118 50 68 chr5 15673727 15674109 -183956041 + THE1C LTR MaLR 1 375 0 189 317 8 98 chr5 15674556 15674632 -183955518 - MIR SINE MIR -41 221 159 1657 170 60 7 chr5 15674632 15674914 -183955236 - AluJo SINE Alu -7 305 9 189 317 8 98 chr5 15674914 15674960 -183955190 - MIR SINE MIR -103 159 110 262 408 0 0 chr5 15675208 15675311 -183954839 - L2 LINE L2 -25 3247 3145 657 191 77 10 chr5 15675335 15675544 -183954606 - MER69 DNA AcHobo -10 2516 2294 1324 166 40 68 chr5 15675854 15676150 -183954000 + AluJb SINE Alu 18 305 -7 5463 96 13 6 chr5 15676594 15677257 -183952893 + L1MA3 LINE L1 5260 6285 -20 5463 117 15 9 chr5 15677257 15678128 -183952022 + L1MA3 LINE L1 5421 6297 -8 5463 96 13 6 chr5 15678128 15678142 -183952008 + L1MA3 LINE L1 6285 6297 -8 241 253 182 0 chr5 15678216 15678386 -183951764 + HAL1 LINE L1 1249 1449 -1058 307 280 84 21 chr5 15678433 15678576 -183951574 + HAL1 LINE L1 1523 1674 -833 515 281 8 48 chr5 15678577 15678826 -183951324 + HAL1 LINE L1 2252 2490 -17 183 374 24 0 chr5 15681233 15681316 -183948834 - MIR SINE MIR -176 86 2 364 307 93 0 chr5 15681625 15681765 -183948385 - MIR3 SINE MIR -12 196 44 2209 111 7 3 chr5 15681773 15682070 -183948080 - AluSx SINE Alu -14 298 1 1550 182 69 21 chr5 15682619 15682910 -183947240 + AluJb SINE Alu 1 305 -7 853 116 0 0 chr5 15683097 15683218 -183946932 + L1PA8 LINE L1 11 131 -6330 * 6884 120 12 17 chr5 15683211 15688850 -183941300 + L1PA8 LINE L1 768 6472 -15 211 353 0 14 chr5 15689105 15689191 -183940959 - MIR SINE MIR -46 162 77 266 280 0 21 chr5 15689923 15690016 -183940134 + L2 LINE L2 1928 2018 -1296 240 330 52 21 chr5 15690024 15690121 -183940029 + L2 LINE L2 2439 2538 -776 200 209 0 0 chr5 15690144 15690187 -183939963 + (CTAGT)n Simple_repeat Simple_repeat 5 47 0 374 354 38 14 chr5 15690191 15690403 -183939747 + L2 LINE L2 2544 2760 -554 3259 173 74 28 chr5 15691193 15691920 -183938230 + LTR48 LTR ERV1 27 787 0 204 200 18 18 chr5 15692935 15692990 -183937160 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 2088 181 36 90 chr5 15695299 15695885 -183934265 - MLT2B3 LTR ERVL 0 554 1 1033 104 38 47 chr5 15695908 15696165 -183933985 + L1PB4 LINE L1 5163 5419 -762 3328 166 48 21 chr5 15696287 15696997 -183933153 + L1PB4 LINE L1 5427 6155 -1 1461 181 0 19 chr5 15697004 15697264 -183932886 + AluJo SINE Alu 42 296 -16 2174 113 0 0 chr5 15697765 15698041 -183932109 + AluSc SINE Alu 1 279 -30 207 0 0 0 chr5 15698041 15698064 -183932086 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2174 113 0 0 chr5 15698064 15698079 -183932071 + AluSc SINE Alu 278 292 -17 2167 137 0 0 chr5 15698334 15698640 -183931510 + AluSx SINE Alu 1 306 -6 290 278 56 0 chr5 15698868 15698940 -183931210 - L2 LINE L2 -46 3226 3151 1881 180 8 8 chr5 15698989 15699350 -183930800 - MLT1A1 LTR MaLR -3 362 2 228 343 59 62 chr5 15699457 15699778 -183930372 - L2 LINE L2 -919 2395 2076 4661 165 30 25 chr5 15699783 15701402 -183928748 + L1PA15 LINE L1 4532 6165 0 319 340 93 15 chr5 15701403 15701662 -183928488 - L2 LINE L2 -1246 2068 1790 891 270 102 47 chr5 15701988 15702480 -183927670 + LTR33A LTR ERVL 1 519 -4 248 68 0 23 chr5 15702548 15702592 -183927558 + (TG)n Simple_repeat Simple_repeat 2 44 0 774 271 0 0 chr5 15702593 15702770 -183927380 + MER8 DNA MER2_type 1 177 -62 375 185 0 0 chr5 15702805 15702870 -183927280 - Tigger2 DNA MER2_type -2649 69 5 21 36 0 0 chr5 15702944 15702972 -183927178 + AT_rich Low_complexity Low_complexity 1 28 0 191 320 24 40 chr5 15703483 15703608 -183926542 + MER5A DNA MER1_type 63 185 -4 2076 125 42 33 chr5 15703851 15704212 -183925938 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr5 15704452 15704473 -183925677 + AT_rich Low_complexity Low_complexity 1 21 0 212 83 0 28 chr5 15704525 15704561 -183925589 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 314 141 0 16 chr5 15704862 15704926 -183925224 + (TTCC)n Simple_repeat Simple_repeat 2 64 0 248 216 21 93 chr5 15704940 15705037 -183925113 - L2 LINE L2 -66 3247 3158 234 281 16 0 chr5 15705105 15705169 -183924981 - L2 LINE L2 -970 2344 2280 1586 138 11 0 chr5 15705191 15705466 -183924684 + L1MA8 LINE L1 5528 5805 -486 27 0 0 0 chr5 15705470 15705497 -183924653 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr5 15705522 15705545 -183924605 + AT_rich Low_complexity Low_complexity 1 23 0 1573 46 0 0 chr5 15705526 15705720 -183924430 - L1PA4 LINE L1 0 6155 5962 2255 172 28 15 chr5 15705722 15706188 -183923962 + L1MA8 LINE L1 5815 6286 -5 360 70 35 0 chr5 15706838 15706895 -183923255 + MADE1 DNA Mariner 22 80 0 1929 128 11 4 chr5 15707868 15708149 -183922001 - AluSx SINE Alu -27 285 3 371 258 11 0 chr5 15708871 15708960 -183921190 - MIR SINE MIR -172 90 1 27 29 0 0 chr5 15709700 15709734 -183920416 + AT_rich Low_complexity Low_complexity 1 34 0 26 98 0 0 chr5 15710156 15710238 -183919912 + AT_rich Low_complexity Low_complexity 1 82 0 2708 118 7 41 chr5 15710387 15710829 -183919321 + MSTA LTR MaLR 1 427 -1 762 305 34 17 chr5 15711731 15711970 -183918180 - MIR SINE MIR -17 245 3 904 298 127 26 chr5 15713122 15713622 -183916528 - L2 LINE L2 0 3313 2764 405 271 69 78 chr5 15713651 15713869 -183916281 - MLT1J LTR MaLR -40 471 256 297 344 60 33 chr5 15715770 15715953 -183914197 + MIR SINE MIR 22 209 -53 1986 157 31 9 chr5 15715955 15716305 -183913845 + THE1B LTR MaLR 5 362 -2 2418 204 32 6 chr5 15716334 15716833 -183913317 - MLT2B1 LTR ERVL -8 512 1 573 289 124 30 chr5 15717076 15717277 -183912873 + MIR SINE MIR 25 244 -18 621 219 7 7 chr5 15717315 15717466 -183912684 - MLT2E LTR ERVL -6 622 472 469 236 172 6 chr5 15717547 15717704 -183912446 - MLT2E LTR ERVL -415 213 31 747 250 37 14 chr5 15717755 15717971 -183912179 - LTR16C LTR ERVL 0 491 271 429 344 69 45 chr5 15718252 15718543 -183911607 + L2 LINE L2 2970 3267 -5 234 265 0 0 chr5 15718543 15718592 -183911558 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 350 317 49 75 chr5 15718755 15719020 -183911130 - MIR SINE MIR 0 262 5 2177 133 8 37 chr5 15719718 15720093 -183910057 + THE1B LTR MaLR 1 364 0 11454 92 17 3 chr5 15720093 15721650 -183908500 + THE1B-int LTR MaLR 1 1580 0 2189 134 8 35 chr5 15721650 15722024 -183908126 + THE1B LTR MaLR 1 364 0 1022 247 30 13 chr5 15722104 15722339 -183907811 + MIR SINE MIR 23 261 -1 25 0 0 0 chr5 15723161 15723186 -183906964 + AT_rich Low_complexity Low_complexity 1 25 0 517 312 177 48 chr5 15723500 15723606 -183906544 - L2 LINE L2 -353 2961 2870 1925 164 0 10 chr5 15723606 15723904 -183906246 + AluSx SINE Alu 1 295 -17 517 312 177 48 chr5 15723904 15724663 -183905487 - L2 LINE L2 -444 2870 1985 284 48 24 0 chr5 15725559 15725601 -183904549 + (CA)n Simple_repeat Simple_repeat 2 44 0 262 256 207 0 chr5 15725666 15725748 -183904402 + L2 LINE L2 3157 3255 -17 207 293 19 47 chr5 15725954 15726060 -183904090 + MIR SINE MIR 31 133 -129 21 36 0 0 chr5 15726251 15726279 -183903871 + AT_rich Low_complexity Low_complexity 1 28 0 216 298 0 0 chr5 15726375 15726422 -183903728 - MIR SINE MIR -168 94 48 417 205 34 29 chr5 15726464 15726489 -183903661 + L1ME3A LINE L1 5343 5366 -765 2134 101 3 7 chr5 15726489 15726787 -183903363 + AluY SINE Alu 1 297 -14 417 205 34 29 chr5 15726787 15726924 -183903226 + L1ME3A LINE L1 5366 5495 -636 446 313 8 8 chr5 15727400 15727531 -183902619 - MER5B DNA MER1_type 0 178 48 1509 234 87 15 chr5 15727532 15728074 -183902076 + L1ME3A LINE L1 5505 6085 -85 399 281 33 0 chr5 15728080 15728201 -183901949 - MER90 LTR ERV1 0 575 451 43 0 0 0 chr5 15729612 15729655 -183900495 + AT_rich Low_complexity Low_complexity 1 43 0 231 190 0 0 chr5 15729681 15729739 -183900411 + T-rich Low_complexity Low_complexity 1 58 0 2035 216 29 86 chr5 15730432 15731057 -183899093 - MLT1E LTR MaLR 0 593 5 1720 38 0 0 chr5 15731208 15731418 -183898732 + L1PA4 LINE L1 5946 6155 0 402 267 67 0 chr5 15732107 15732212 -183897938 - MIR SINE MIR -70 192 81 288 0 0 0 chr5 15733712 15733744 -183896406 + (CA)n Simple_repeat Simple_repeat 1 32 0 262 235 29 39 chr5 15734082 15734184 -183895966 + GA-rich Low_complexity Low_complexity 1 101 0 22 0 0 0 chr5 15734768 15734790 -183895360 + AT_rich Low_complexity Low_complexity 1 22 0 455 299 118 16 chr5 15735721 15735908 -183894242 + MIR SINE MIR 34 239 -23 209 348 116 34 chr5 15736543 15736750 -183893400 + L2 LINE L2 3025 3248 -24 1536 298 58 12 chr5 15737085 15737676 -183892474 + L1M4b LINE L1 -302 315 -6231 513 288 33 66 chr5 15737677 15737951 -183892199 + L1M4b LINE L1 368 632 -5914 1157 204 21 71 chr5 15738564 15738942 -183891208 + L1M4b LINE L1 892 1250 -5296 2345 164 36 4 chr5 15738944 15739247 -183890903 - L1P4 LINE L1 -557 5604 5312 1987 42 23 8 chr5 15739247 15739509 -183890641 - L1PA4 LINE L1 -3 6152 5887 2345 164 36 4 chr5 15739509 15739939 -183890211 - L1P4 LINE L1 -849 5312 4851 1377 111 0 18 chr5 15739939 15740162 -183889988 + L1PA13 LINE L1 5943 6163 0 446 158 55 24 chr5 15740162 15740289 -183889861 + L1M4b LINE L1 1237 1367 -5179 2186 197 22 9 chr5 15740295 15740575 -183889575 - MLT1C LTR MaLR 0 467 177 3353 80 18 7 chr5 15740575 15741023 -183889127 - MLT2A2 LTR ERVL 0 453 1 2186 197 22 9 chr5 15741023 15741203 -183888947 - MLT1C LTR MaLR -290 177 1 332 213 0 54 chr5 15741209 15741324 -183888826 + L1M4b LINE L1 1366 1582 -5062 405 258 55 20 chr5 15741331 15741347 -183888803 + L1M4b LINE L1 1408 1422 -5143 1782 157 67 14 chr5 15741347 15741703 -183888447 - THE1C LTR MaLR 0 375 1 405 258 55 20 chr5 15741703 15741882 -183888268 + L1M4b LINE L1 1422 2002 -4563 2356 49 0 7 chr5 15742125 15742461 -183887689 + AluY SINE Alu 1 334 0 297 267 103 26 chr5 15743684 15743800 -183886350 + MIR SINE MIR 68 192 -70 1285 190 16 71 chr5 15744035 15744330 -183885820 - AluJo SINE Alu -19 293 14 2300 98 47 36 chr5 15744330 15744689 -183885461 + THE1B LTR MaLR 2 364 0 1285 190 16 71 chr5 15744689 15744703 -183885447 - AluJo SINE Alu -298 14 1 512 234 120 33 chr5 15745547 15745731 -183884419 + MIR SINE MIR 13 212 -50 377 319 0 0 chr5 15745782 15745876 -183884274 - MER5A DNA MER1_type -84 105 12 414 39 0 0 chr5 15745940 15745992 -183884158 + (ATG)n Simple_repeat Simple_repeat 1 52 0 1568 206 124 16 chr5 15746140 15746591 -183883559 + MLT1D LTR MaLR 6 505 0 769 188 0 8 chr5 15746783 15746916 -183883234 + MER2 DNA MER2_type 1 132 -213 409 224 0 0 chr5 15746969 15747045 -183883105 + MER2 DNA MER2_type 267 342 -3 2039 235 87 17 chr5 15747457 15747901 -183882249 + L1M4b LINE L1 2008 2420 -4224 2171 186 104 8 chr5 15747901 15748370 -183881780 - MER67D LTR ERV1 0 514 1 2039 235 87 17 chr5 15748370 15748889 -183881261 + L1M4b LINE L1 2420 2988 -3656 436 296 66 13 chr5 15748904 15749056 -183881094 + MER5A DNA MER1_type 30 189 0 1548 117 17 176 chr5 15749389 15749792 -183880358 - MER44D DNA MER2_type 0 609 1 414 237 178 13 chr5 15749801 15749953 -183880197 - MER5B DNA MER1_type 0 178 2 1871 168 31 11 chr5 15750412 15750770 -183879380 - MLT1A1 LTR MaLR 0 365 1 457 292 46 29 chr5 15750898 15751110 -183879040 - MIR SINE MIR -44 218 2 1775 82 50 14 chr5 15754929 15755210 -183874940 - L1MA3 LINE L1 0 6305 6015 225 313 72 0 chr5 15755635 15755718 -183874432 + L2 LINE L2 2996 3084 -229 975 154 0 0 chr5 15756132 15756294 -183873856 + L1MA6 LINE L1 6134 6295 -5 599 165 23 23 chr5 15756309 15756442 -183873708 + L1MA7 LINE L1 6156 6288 -3 1645 155 120 29 chr5 15756656 15756998 -183873152 + THE1C LTR MaLR 1 373 -2 9762 131 47 36 chr5 15757002 15758563 -183871587 + THE1C-int LTR MaLR 3 1580 0 1925 131 57 41 chr5 15758565 15758932 -183871218 + THE1C LTR MaLR 3 375 0 276 284 52 52 chr5 15758982 15759098 -183871052 + L2 LINE L2 3157 3272 0 244 314 57 0 chr5 15760448 15760553 -183869597 - L1ME LINE L1 -498 5623 5513 23 78 0 0 chr5 15760584 15760635 -183869515 + AT_rich Low_complexity Low_complexity 1 51 0 684 205 60 7 chr5 15762105 15762256 -183867894 - MER69A DNA AcHobo 0 177 19 1004 196 37 28 chr5 15762773 15762987 -183867163 + MER20 DNA MER1_type 3 218 -1 460 275 60 30 chr5 15764118 15764318 -183865832 - MIR SINE MIR -54 208 3 581 302 53 26 chr5 15764815 15765004 -183865146 + MIR SINE MIR 51 244 -18 192 158 0 0 chr5 15765044 15765082 -183865068 + (CA)n Simple_repeat Simple_repeat 1 38 0 265 167 0 0 chr5 15765085 15765133 -183865017 - MER4-int LTR ERV1 -5442 1156 1109 202 220 17 51 chr5 15766562 15766621 -183863529 - L2 LINE L2 -2 3311 3255 1850 216 36 13 chr5 15767134 15767518 -183862632 + MSTD LTR MaLR 4 396 0 3207 208 40 3 chr5 15767577 15768198 -183861952 + MER82 DNA MER2_type 2 645 -8 328 326 57 14 chr5 15768206 15768347 -183861803 + L2 LINE L2 3161 3307 -6 399 361 116 20 chr5 15768359 15768661 -183861489 + L2 LINE L2 2942 3272 0 2228 116 0 7 chr5 15768667 15768968 -183861182 + AluSg SINE Alu 1 299 -11 183 309 56 71 chr5 15771903 15772029 -183858121 - L2 LINE L2 -811 2503 2380 348 307 58 117 chr5 15772271 15772515 -183857635 + L2 LINE L2 237 494 -2820 787 255 57 9 chr5 15772515 15772727 -183857423 - MIR SINE MIR -34 228 7 348 307 58 117 chr5 15772727 15772906 -183857244 + L2 LINE L2 494 834 -2480 270 293 73 37 chr5 15773086 15773320 -183856830 + MLT1J2 LTR MaLR 66 313 -133 2253 131 25 68 chr5 15773990 15774244 -183855906 + L1MA8 LINE L1 5865 6093 -198 2267 87 3 10 chr5 15774244 15774543 -183855607 - AluY SINE Alu -14 297 1 2253 131 25 68 chr5 15774543 15774732 -183855418 + L1MA8 LINE L1 6093 6289 -2 1442 208 46 74 chr5 15774847 15775308 -183854842 + MLT1C LTR MaLR 4 451 -16 3931 163 32 60 chr5 15776108 15776914 -183853236 + LTR1 LTR ERV1 1 784 -1 406 313 30 8 chr5 15777006 15777137 -183853013 + MIR SINE MIR 25 158 -104 207 139 0 0 chr5 15777721 15777757 -183852393 + (A)n Simple_repeat Simple_repeat 1 36 0 288 210 0 32 chr5 15778055 15778117 -183852033 - L2 LINE L2 0 3313 3254 40 21 0 0 chr5 15778618 15778665 -183851485 + AT_rich Low_complexity Low_complexity 1 47 0 258 57 0 0 chr5 15778676 15778711 -183851439 + L1MA1 LINE L1 6148 6182 -120 897 263 11 4 chr5 15778782 15779044 -183851106 + L1P5 LINE L1 7 270 -6593 * 1940 184 25 5 chr5 15779043 15779649 -183850501 + L1P5 LINE L1 901 1701 -5162 10022 186 26 14 chr5 15779658 15782357 -183847793 + L1P5 LINE L1 3774 6506 -361 261 214 0 82 chr5 15782371 15782469 -183847681 + L1MC4 LINE L1 6614 6703 -1339 348 248 0 0 chr5 15782479 15782628 -183847522 + (TA)n Simple_repeat Simple_repeat 2 150 0 305 287 0 21 chr5 15782630 15782724 -183847426 - L1MC4 LINE L1 -1336 6706 6615 * 323 241 23 23 chr5 15782649 15782736 -183847414 + L1MC4 LINE L1 6616 6702 -1340 2527 126 11 0 chr5 15782736 15783100 -183847050 + L1PB1 LINE L1 5782 6149 -2 316 265 29 0 chr5 15784328 15784430 -183845720 + (CAGAGA)n Simple_repeat Simple_repeat 1 105 0 1292 158 48 0 chr5 15785034 15785243 -183844907 + MER20 DNA MER1_type 1 219 0 26 30 0 0 chr5 15787258 15787291 -183842859 + AT_rich Low_complexity Low_complexity 1 33 0 277 267 118 30 chr5 15787474 15787609 -183842541 - MIR3 SINE MIR -41 167 21 539 282 20 0 chr5 15788628 15788777 -183841373 + HAL1 LINE L1 1 152 -2355 340 225 12 25 chr5 15788782 15788862 -183841288 + HAL1 LINE L1 195 273 -2234 721 282 89 4 chr5 15788867 15789115 -183841035 + HAL1 LINE L1 425 693 -1814 1469 171 87 7 chr5 15789636 15789922 -183840228 - AluJb SINE Alu -1 311 3 1353 228 54 0 chr5 15792796 15793094 -183837056 - MER58B DNA MER1_type -27 314 1 2389 147 39 0 chr5 15793443 15793832 -183836318 + MSTB-int LTR MaLR 1248 1651 0 2857 129 55 0 chr5 15793832 15794234 -183835916 + MSTB LTR MaLR 1 424 -2 382 300 36 122 chr5 15794248 15794641 -183835509 - L2 LINE L2 0 3272 2914 2098 122 7 0 chr5 15794914 15795202 -183834948 - AluSg SINE Alu -20 290 1 253 311 126 38 chr5 15795479 15795662 -183834488 - L2 LINE L2 -510 2804 2606 28 61 0 0 chr5 15796675 15796724 -183833426 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr5 15797028 15797050 -183833100 + AT_rich Low_complexity Low_complexity 1 22 0 221 265 0 0 chr5 15798249 15798298 -183831852 + GA-rich Low_complexity Low_complexity 3 51 0 23 0 0 0 chr5 15798812 15798835 -183831315 + AT_rich Low_complexity Low_complexity 1 23 0 219 325 197 21 chr5 15799017 15799205 -183830945 + MIR SINE MIR 30 250 -12 2054 80 0 0 chr5 15799680 15799953 -183830197 - AluY SINE Alu 0 304 32 2159 97 13 13 chr5 15799956 15800254 -183829896 - AluSp SINE Alu -15 298 1 215 195 39 65 chr5 15800996 15801073 -183829077 - MIR3 SINE MIR -4 204 130 1589 192 49 3 chr5 15801102 15801389 -183828761 + AluJo SINE Alu 1 300 -12 1456 188 19 58 chr5 15801420 15801626 -183828524 - MLT1A1 LTR MaLR -17 348 160 2180 100 3 10 chr5 15801626 15801917 -183828233 - AluSx SINE Alu -21 291 3 1456 188 19 58 chr5 15801917 15802072 -183828078 - MLT1A1 LTR MaLR -205 160 1 382 308 178 0 chr5 15802326 15802495 -183827655 - MIR SINE MIR -1 261 63 216 238 0 0 chr5 15802950 15803013 -183827137 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 1629 186 34 40 chr5 15803232 15803610 -183826540 + MLT1A2 LTR MaLR 1 467 0 499 304 54 87 chr5 15803781 15804229 -183825921 + L2 LINE L2 2868 3300 -13 24 0 0 0 chr5 15805331 15805355 -183824795 + AT_rich Low_complexity Low_complexity 1 24 0 1957 96 0 99 chr5 15805655 15805977 -183824173 - AluSq SINE Alu -23 290 1 986 114 8 0 chr5 15806893 15807025 -183823125 + AluSq/x SINE Alu 1 133 -179 2002 148 0 16 chr5 15807030 15807347 -183822803 + AluSx SINE Alu 1 312 0 28 0 0 0 chr5 15807483 15807511 -183822639 + AT_rich Low_complexity Low_complexity 1 28 0 2102 137 16 26 chr5 15808430 15808809 -183821341 + THE1C LTR MaLR 1 375 0 1907 252 96 17 chr5 15809122 15809758 -183820392 + L2 LINE L2 2203 2888 -426 503 200 350 0 chr5 15809770 15809910 -183820240 - MER5A DNA MER1_type 0 189 1 * 852 271 121 31 chr5 15809910 15810291 -183819859 + L2 LINE L2 2898 3313 0 319 311 110 26 chr5 15811020 15811240 -183818910 + MIR SINE MIR 16 251 -11 287 96 19 0 chr5 15812426 15812478 -183817672 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 6471 109 23 21 chr5 15812580 15813887 -183816263 + L1MA5A LINE L1 4993 6297 0 21 57 0 0 chr5 15815085 15815120 -183815030 + AT_rich Low_complexity Low_complexity 1 35 0 10136 35 8 1 chr5 15816146 15818154 -183811996 - L1PA5 LINE L1 -8 6146 4128 204 97 0 0 chr5 15818763 15818794 -183811356 + (TTG)n Simple_repeat Simple_repeat 3 33 0 226 278 19 0 chr5 15819223 15819277 -183810873 + L3 LINE CR1 1519 1573 -4 211 292 0 0 chr5 15819304 15819352 -183810798 + polypurine Low_complexity Low_complexity 6 53 0 21 57 0 0 chr5 15820511 15820546 -183809604 + AT_rich Low_complexity Low_complexity 1 35 0 222 195 0 0 chr5 15820672 15820713 -183809437 + GA-rich Low_complexity Low_complexity 4 44 0 1620 179 50 52 chr5 15820767 15821187 -183808963 - LTR52 LTR ERVL -2 419 1 1640 115 70 25 chr5 15821658 15821972 -183808178 + MER46B DNA MER2_type 33 235 -1 397 138 0 106 chr5 15823270 15823364 -183806786 - L1PA10 LINE L1 0 6168 6085 2083 117 4 4 chr5 15823807 15824088 -183806062 - AluSp SINE Alu -32 281 1 304 239 54 15 chr5 15824365 15824495 -183805655 + L1ME4a LINE L1 5741 5875 -246 5529 94 5 4 chr5 15825783 15826608 -183803542 - L1PA13 LINE L1 0 6163 5338 1039 165 30 9 chr5 15826614 15826844 -183803306 + L1PA13 LINE L1 5122 5356 -790 235 257 0 40 chr5 15827102 15827176 -183802974 - MER69 DNA AcHobo 0 2526 2456 1785 150 34 0 chr5 15827312 15827579 -183802571 + AluJb SINE Alu 5 280 -32 216 0 0 0 chr5 15827579 15827603 -183802547 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 556 246 126 6 chr5 15828281 15828464 -183801686 - MER58C DNA MER1_type -2 213 9 31 0 0 0 chr5 15829300 15829331 -183800819 + AT_rich Low_complexity Low_complexity 1 31 0 532 291 59 25 chr5 15829361 15829564 -183800586 + MIR SINE MIR 53 262 0 1201 101 9 85 chr5 15830399 15830715 -183799435 + AluY SINE Alu 1 292 -19 785 258 155 15 chr5 15833332 15834027 -183796123 + L1ME3 LINE L1 5004 5787 -383 1539 204 45 47 chr5 15834040 15834462 -183795688 - MER63B DNA MER1_type -10 426 6 923 247 57 22 chr5 15834468 15834837 -183795313 + L1ME3 LINE L1 5781 6162 0 2237 115 0 3 chr5 15836315 15836620 -183793530 - AluSx SINE Alu -8 304 1 226 324 65 14 chr5 15836647 15836786 -183793364 - L2 LINE L2 -1455 1859 1714 1927 140 70 22 chr5 15837317 15837675 -183792475 + THE1C LTR MaLR 1 375 0 463 336 7 7 chr5 15837783 15837929 -183792221 - MIR3 SINE MIR -36 172 27 808 59 0 0 chr5 15838435 15838537 -183791613 - AluY SINE Alu -4 307 206 801 201 41 55 chr5 15839687 15839906 -183790244 - MER20 DNA MER1_type -1 218 3 187 283 22 0 chr5 15842991 15843037 -183787113 - L2 LINE L2 -252 3061 3015 385 296 228 29 chr5 15843152 15843744 -183786406 - L2 LINE L2 -448 2866 2157 457 124 41 28 chr5 15844574 15844719 -183785431 + (TAGA)n Simple_repeat Simple_repeat 3 149 0 281 316 53 23 chr5 15844719 15844852 -183785298 + MIR3 SINE MIR 21 157 -51 190 303 71 30 chr5 15845048 15845147 -183785003 - MER5B DNA MER1_type -45 133 31 897 135 11 17 chr5 15847641 15847819 -183782331 + GA-rich Low_complexity Low_complexity 4 180 0 329 265 112 39 chr5 15848139 15848338 -183781812 + MIR SINE MIR 2 216 -46 305 314 126 42 chr5 15849185 15849446 -183780704 + L2 LINE L2 2808 3090 -182 198 182 30 121 chr5 15849587 15849653 -183780497 + L2 LINE L2 3253 3312 -1 2340 114 14 3 chr5 15850636 15850987 -183779163 + THE1A LTR MaLR 1 355 0 228 274 53 32 chr5 15853737 15853832 -183776318 + L3 LINE CR1 1478 1574 -3 2432 111 28 8 chr5 15854107 15854579 -183775571 - MER1A DNA MER1_type 0 529 2 1517 188 21 3 chr5 15854685 15855010 -183775140 - L1MB3 LINE L1 -2 6181 5851 1576 123 68 0 chr5 15856170 15856406 -183773744 + AluSx SINE Alu 43 294 -18 189 250 0 0 chr5 15857650 15857698 -183772452 - L2 LINE L2 0 3313 3266 4029 81 9 4 chr5 15858985 15859570 -183770580 + L1PA14 LINE L1 5327 5913 -248 2099 119 19 25 chr5 15859571 15859933 -183770217 + THE1C LTR MaLR 15 374 -1 1884 86 0 0 chr5 15859933 15860189 -183769961 + L1PA14 LINE L1 5906 6161 0 22 0 0 0 chr5 15860194 15860216 -183769934 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr5 15860665 15860709 -183769441 + AT_rich Low_complexity Low_complexity 1 44 0 22 70 0 0 chr5 15861014 15861057 -183769093 + AT_rich Low_complexity Low_complexity 1 43 0 2329 60 0 7 chr5 15863785 15864092 -183766058 + AluY SINE Alu 1 305 0 18712 55 1 7 chr5 15864133 15867319 -183762831 + L1PA6 LINE L1 2970 6153 -1 2009 117 33 0 chr5 15867832 15868166 -183761984 - AluSx SINE Alu 0 343 1 1025 160 0 11 chr5 15868782 15868969 -183761181 - Tigger4(Zombi) DNA MER2_type 0 2731 2547 33 0 0 0 chr5 15869023 15869056 -183761094 + AT_rich Low_complexity Low_complexity 1 33 0 254 149 0 0 chr5 15869060 15869107 -183761043 - Tigger4(Zombi) DNA MER2_type -191 2540 2494 1280 165 41 0 chr5 15869113 15869355 -183760795 - Tigger4(Zombi) DNA MER2_type -2479 252 1 417 253 63 76 chr5 15869962 15870120 -183760030 + L2 LINE L2 3158 3313 0 365 293 66 82 chr5 15870121 15870184 -183759966 + L2 LINE L2 2444 2506 -808 2310 128 103 5 chr5 15870184 15870574 -183759576 + MSTA LTR MaLR 1 428 0 365 293 66 82 chr5 15870574 15870827 -183759323 + L2 LINE L2 2506 2755 -559 22 0 0 0 chr5 15871162 15871184 -183758966 + AT_rich Low_complexity Low_complexity 1 22 0 236 317 98 32 chr5 15871760 15871883 -183758267 - MER91C DNA MER1_type -9 131 1 203 432 0 0 chr5 15871887 15871975 -183758175 + MIR SINE MIR 31 118 -90 221 258 22 22 chr5 15871999 15872088 -183758062 + (TA)n Simple_repeat Simple_repeat 1 89 0 24 0 0 0 chr5 15872265 15872289 -183757861 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 15873187 15873209 -183756941 + AT_rich Low_complexity Low_complexity 1 22 0 312 229 110 18 chr5 15873273 15873382 -183756768 + MER94 DNA DNA 3 121 -13 249 265 1 27 chr5 15874099 15874174 -183755976 + MER21B LTR ERV1 24 125 -480 2183 119 0 0 chr5 15874318 15874611 -183755539 + AluSc SINE Alu 1 293 -16 1025 271 53 46 chr5 15874625 15875056 -183755094 + MER21B LTR ERV1 254 687 -176 1853 181 16 5 chr5 15876873 15877051 -183753099 + MLT1B LTR MaLR 1 176 -214 2321 114 13 0 chr5 15877051 15877359 -183752791 + AluSx SINE Alu 1 312 0 1853 181 16 5 chr5 15877359 15877561 -183752589 + MLT1B LTR MaLR 176 385 -5 2404 46 0 3 chr5 15877781 15878064 -183752086 + AluY SINE Alu 1 282 -29 22 0 0 0 chr5 15878517 15878539 -183751611 + AT_rich Low_complexity Low_complexity 1 22 0 2312 68 0 43 chr5 15879562 15879884 -183750266 + AluY SINE Alu 1 308 -3 3327 113 91 4 chr5 15879888 15880448 -183749702 + L1MA3 LINE L1 5697 6305 0 945 272 41 0 chr5 15881023 15881269 -183748881 - MIR SINE MIR -1 261 6 1936 177 0 0 chr5 15881409 15881708 -183748442 - AluJb SINE Alu -13 299 1 277 349 23 16 chr5 15882568 15882697 -183747453 - MER5B DNA MER1_type -48 130 1 21 0 0 0 chr5 15883132 15883153 -183746997 + AT_rich Low_complexity Low_complexity 1 21 0 181 222 0 44 chr5 15883746 15883791 -183746359 - L2 LINE L2 -2894 420 378 722 250 282 0 chr5 15884164 15884480 -183745670 - L2 LINE L2 -1 3312 2908 830 205 21 7 chr5 15884486 15884732 -183745418 + MLT1A1 LTR MaLR 5 334 -31 791 286 99 40 chr5 15884865 15885362 -183744788 - L2 LINE L2 -986 2328 1803 1150 95 0 0 chr5 15887419 15887567 -183742583 + AluSg SINE Alu 1 148 -162 477 299 120 0 chr5 15889079 15889263 -183740887 + MIR SINE MIR 47 252 -10 2388 83 0 7 chr5 15889645 15889947 -183740203 + AluSg SINE Alu 1 300 -10 798 112 112 22 chr5 15890002 15890180 -183739970 + L1MB3 LINE L1 5988 6181 -2 633 316 30 30 chr5 15890506 15890740 -183739410 - MIR SINE MIR -26 236 3 22 35 0 0 chr5 15890765 15890794 -183739356 + AT_rich Low_complexity Low_complexity 1 29 0 1457 205 47 10 chr5 15890887 15891184 -183738966 - AluJo SINE Alu -4 308 1 1984 157 3 3 chr5 15891341 15891653 -183738497 - AluJb SINE Alu 0 312 1 24 0 0 0 chr5 15892638 15892662 -183737488 + AT_rich Low_complexity Low_complexity 1 24 0 25 65 0 0 chr5 15892768 15892814 -183737336 + AT_rich Low_complexity Low_complexity 1 46 0 3331 142 13 31 chr5 15894065 15894164 -183735986 + L1MB2 LINE L1 5569 5668 -503 1903 150 7 7 chr5 15894164 15894444 -183735706 + AluSx SINE Alu 2 281 -31 270 0 0 0 chr5 15894450 15894480 -183735670 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3331 142 13 31 chr5 15894480 15894987 -183735163 + L1MB2 LINE L1 5673 6171 0 2626 102 11 5 chr5 15895467 15895838 -183734312 + THE1C LTR MaLR 1 373 -2 3875 108 65 76 chr5 15895838 15896589 -183733561 + THE1C-int LTR MaLR 4 746 -834 1512 88 5 5 chr5 15896589 15896806 -183733344 + THE1C-int LTR MaLR 1364 1580 0 2621 102 16 5 chr5 15896806 15897177 -183732973 + THE1C LTR MaLR 1 375 0 1908 250 37 47 chr5 15897536 15898107 -183732043 + MLT1E LTR MaLR 29 593 0 21 0 0 0 chr5 15898416 15898437 -183731713 + AT_rich Low_complexity Low_complexity 1 21 0 392 229 83 14 chr5 15900074 15900218 -183729932 + MER103 DNA DNA 4 157 -9 343 264 101 27 chr5 15900929 15901099 -183729051 - MIR SINE MIR -52 210 30 946 92 0 14 chr5 15901124 15901266 -183728884 + L1PA13 LINE L1 6023 6162 -1 269 321 75 0 chr5 15901739 15901845 -183728305 + L2 LINE L2 3197 3310 -3 2249 107 0 13 chr5 15902262 15902561 -183727589 + AluSg SINE Alu 1 295 -15 266 254 105 27 chr5 15902662 15902786 -183727364 - MIR3 SINE MIR -49 159 25 21 0 0 0 chr5 15903330 15903351 -183726799 + AT_rich Low_complexity Low_complexity 1 21 0 241 232 18 0 chr5 15903594 15903650 -183726500 - L2 LINE L2 -1 3312 3256 717 279 135 22 chr5 15903673 15904119 -183726031 - L2 LINE L2 -219 3094 2590 1937 112 22 0 chr5 15904127 15904394 -183725756 + AluSx SINE Alu 22 294 -18 3247 153 44 10 chr5 15904396 15905015 -183725135 + LTR9B LTR ERV1 5 644 0 185 325 26 34 chr5 15905023 15905140 -183725010 - L2 LINE L2 -749 2565 2450 372 208 0 0 chr5 15905161 15905233 -183724917 - MLT1D LTR MaLR -433 72 1 1241 285 148 4 chr5 15905248 15905760 -183724390 - L2 LINE L2 -881 2433 1848 1436 244 99 38 chr5 15905766 15906340 -183723810 + MLT1E2 LTR MaLR 13 621 -5 308 270 246 9 chr5 15906343 15906554 -183723596 - L2 LINE L2 -1457 1857 1597 2087 123 7 13 chr5 15906921 15907231 -183722919 - AluY SINE Alu -3 308 1 452 194 0 0 chr5 15907248 15907351 -183722799 - L1MA7 LINE L1 -2 6289 6187 315 301 30 38 chr5 15907429 15907478 -183722672 - MIR3 SINE MIR -9 199 151 3234 108 16 85 chr5 15907478 15908041 -183722109 + MER1A DNA MER1_type 4 527 0 315 301 30 38 chr5 15908041 15908124 -183722026 - MIR3 SINE MIR -57 151 68 2120 113 0 0 chr5 15911325 15911747 -183718403 + AluSq SINE Alu 1 422 0 535 196 0 10 chr5 15911903 15912005 -183718145 + MER69A DNA AcHobo 4 104 -73 412 334 88 34 chr5 15912307 15912660 -183717490 + L2 LINE L2 2475 2846 -468 577 180 16 8 chr5 15912661 15912783 -183717367 + MLT1C LTR MaLR 1 123 -344 368 80 293 13 chr5 15912782 15912857 -183717293 + MLT1C LTR MaLR 372 467 0 * 250 322 53 13 chr5 15912910 15913062 -183717088 + L2 LINE L2 2921 3078 -194 252 315 0 0 chr5 15913377 15913431 -183716719 + L2 LINE L2 3202 3255 -17 28 0 0 0 chr5 15914983 15915011 -183715139 + AT_rich Low_complexity Low_complexity 1 28 0 1951 149 0 38 chr5 15915050 15915366 -183714784 - AluSx SINE Alu -8 304 1 1355 99 25 0 chr5 15915372 15915573 -183714577 - L1PA15 LINE L1 -16 6149 5944 1992 140 16 13 chr5 15916670 15916978 -183713172 + AluSx SINE Alu 1 309 -3 180 97 0 0 chr5 15916996 15917027 -183713123 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 3075 123 25 82 chr5 15917588 15918147 -183712003 - MER1A DNA MER1_type 0 527 1 454 32 63 0 chr5 15918286 15918349 -183711801 - L1PA4 LINE L1 -2 6153 6087 21 57 0 0 chr5 15920427 15920462 -183709688 + AT_rich Low_complexity Low_complexity 1 35 0 1953 154 3 7 chr5 15920539 15920837 -183709313 - AluJb SINE Alu -15 297 1 24545 103 26 67 chr5 15921008 15921392 -183708758 + L1PA7 LINE L1 8 406 -6055 2372 89 3 0 chr5 15921392 15921695 -183708455 - AluSp SINE Alu -9 304 1 24545 103 26 67 chr5 15921695 15924433 -183705717 + L1PA7 LINE L1 406 2850 -3611 2831 0 0 0 chr5 15924433 15924736 -183705414 - AluYa5 SINE Alu -8 303 1 24545 103 26 67 chr5 15924736 15927230 -183702920 + L1PA7 LINE L1 2850 5446 -1015 4454 67 3 0 chr5 15927230 15927807 -183702343 + L1PA7 LINE L1 5887 6469 0 253 186 0 127 chr5 15929472 15929572 -183700578 + MLT1J LTR MaLR 41 126 -320 708 235 24 24 chr5 15929600 15929770 -183700380 - MER5B DNA MER1_type -7 171 2 446 303 15 20 chr5 15929827 15930022 -183700128 + MLT1J LTR MaLR 315 508 -3 398 252 41 32 chr5 15930197 15930320 -183699830 + L2 LINE L2 3186 3309 -4 2207 113 13 0 chr5 15930903 15931205 -183698945 + AluSx SINE Alu 1 306 -6 29 28 0 0 chr5 15932070 15932106 -183698044 + AT_rich Low_complexity Low_complexity 1 36 0 630 300 166 54 chr5 15932391 15933202 -183696948 + L2 LINE L2 2072 2973 -341 2186 98 49 0 chr5 15934236 15934522 -183695628 - AluSc SINE Alu -9 300 1 353 311 34 0 chr5 15936166 15936285 -183693865 + L2 LINE L2 3149 3271 -1 2121 113 26 47 chr5 15936441 15936821 -183693329 + THE1C LTR MaLR 2 373 -2 232 271 29 0 chr5 15937395 15937465 -183692685 + MIR SINE MIR 117 188 -74 345 258 108 42 chr5 15938866 15939033 -183691117 + L1ME4a LINE L1 5944 6121 0 216 0 0 0 chr5 15939035 15939059 -183691091 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 249 255 255 0 chr5 15939333 15939431 -183690719 + MIR SINE MIR 82 204 -58 536 240 134 9 chr5 15939433 15939799 -183690351 + LTR16A1 LTR ERVL 8 442 -15 367 323 55 30 chr5 15941537 15941772 -183688378 - L1M4 LINE L1 -1535 4611 4371 845 210 10 68 chr5 15942079 15942364 -183687786 + L1PB4 LINE L1 5903 6296 -2 201 208 21 0 chr5 15942559 15942607 -183687543 + (TTA)n Simple_repeat Simple_repeat 1 49 0 215 79 26 0 chr5 15942871 15942909 -183687241 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 830 174 0 0 chr5 15942909 15943030 -183687120 - FLAM_C SINE Alu -22 121 1 1792 199 3 0 chr5 15943754 15944046 -183686104 - AluSx SINE Alu -19 293 1 2301 103 10 0 chr5 15944415 15944716 -183685434 + AluSq SINE Alu 1 304 -9 1899 251 30 48 chr5 15946125 15946961 -183683189 + L1M3de LINE L1 938 1867 -5619 6275 237 13 13 chr5 15946975 15948523 -183681627 + L1M3de LINE L1 1199 2535 -4951 506 165 11 0 chr5 15948523 15948614 -183681536 - Tigger5 DNA MER2_type 0 2323 2232 271 217 0 17 chr5 15948663 15948723 -183681427 - Tigger5 DNA MER2_type 0 2323 2265 267 175 0 35 chr5 15948705 15948762 -183681388 - Tigger5 DNA MER2_type -2268 55 1 * 5490 223 52 33 chr5 15948762 15951779 -183678371 + L1M3de LINE L1 2259 5293 -2272 25 0 0 0 chr5 15953178 15953203 -183676947 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 15953558 15953582 -183676568 + AT_rich Low_complexity Low_complexity 1 24 0 414 212 53 44 chr5 15953637 15953750 -183676400 + MIR SINE MIR 90 203 -59 2044 116 7 13 chr5 15953788 15954091 -183676059 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr5 15954095 15954120 -183676030 + AT_rich Low_complexity Low_complexity 1 25 0 195 129 0 0 chr5 15954140 15954171 -183675979 + (CA)n Simple_repeat Simple_repeat 1 31 0 327 104 0 0 chr5 15954499 15954547 -183675603 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 185 315 28 77 chr5 15954749 15954892 -183675258 + MIR3 SINE MIR 46 181 -27 537 259 157 5 chr5 15956017 15956202 -183673948 + MIR SINE MIR 50 262 0 419 330 146 40 chr5 15956701 15957510 -183672640 + L2 LINE L2 748 1642 -1672 441 283 101 25 chr5 15957562 15957760 -183672390 + L2 LINE L2 2916 3128 -185 560 296 45 42 chr5 15957928 15958330 -183671820 + L1ME4a LINE L1 5530 5932 -189 24 67 0 0 chr5 15958393 15958438 -183671712 + AT_rich Low_complexity Low_complexity 1 45 0 1696 200 140 18 chr5 15958659 15959160 -183670990 + MER68 LTR ERV1 1 562 0 2153 111 3 3 chr5 15959357 15959654 -183670496 + AluSx SINE Alu 1 297 -15 183 315 69 23 chr5 15960697 15960827 -183669323 + L2 LINE L2 2947 3082 -190 646 167 65 14 chr5 15961507 15961645 -183668505 + MLT1D LTR MaLR 1 145 -360 228 306 62 42 chr5 15961907 15962051 -183668099 - L3b LINE CR1 -133 1450 1304 238 229 0 0 chr5 15962719 15962780 -183667370 + L1MA7 LINE L1 6197 6257 -34 24 67 0 0 chr5 15962825 15962870 -183667280 + AT_rich Low_complexity Low_complexity 1 45 0 334 252 37 0 chr5 15963279 15963386 -183666764 - MER103 DNA DNA -45 121 11 2671 3 0 3 chr5 15964216 15964510 -183665640 + AluYa5 SINE Alu 1 293 -18 1654 265 122 53 chr5 15964873 15965920 -183664230 + L2 LINE L2 2183 3305 -8 323 145 72 123 chr5 15966236 15966374 -183663776 - MER103 DNA DNA -14 152 22 234 347 57 32 chr5 15966636 15966760 -183663390 - MIR3 SINE MIR -67 141 15 1304 301 44 9 chr5 15967016 15967475 -183662675 + MLT1H1 LTR MaLR 26 500 -55 471 303 55 55 chr5 15967739 15967977 -183662173 + MIR SINE MIR 3 240 -22 1462 293 54 71 chr5 15968019 15968153 -183661997 + L2 LINE L2 1894 2029 -1285 2320 107 7 0 chr5 15968153 15968463 -183661687 - AluSx SINE Alu 0 312 1 1462 293 54 71 chr5 15968463 15969367 -183660783 + L2 LINE L2 2029 2914 -400 27 87 0 0 chr5 15970843 15970912 -183659238 + AT_rich Low_complexity Low_complexity 1 69 0 446 326 160 39 chr5 15971428 15971815 -183658335 + L1MEd LINE L1 29 462 -5657 323 250 12 0 chr5 15971828 15971912 -183658238 - MER58 DNA MER1_type -60 281 197 357 300 80 52 chr5 15972032 15972722 -183657428 + L1MEd LINE L1 544 1252 -4867 25 51 0 0 chr5 15972785 15972824 -183657326 + AT_rich Low_complexity Low_complexity 1 39 0 463 344 41 36 chr5 15972831 15973194 -183656956 + L1MEd LINE L1 1321 1685 -4444 340 281 154 19 chr5 15973280 15973540 -183656610 + L1MEd LINE L1 1877 2171 -3958 197 199 60 0 chr5 15973554 15973720 -183656430 + (TA)n Simple_repeat Simple_repeat 1 176 0 243 266 10 80 chr5 15973803 15973861 -183656289 + L1MEd LINE L1 2196 2257 -3872 1991 167 0 0 chr5 15973861 15974172 -183655978 + AluJb SINE Alu 1 311 -1 243 266 10 80 chr5 15974172 15974312 -183655838 + L1MEd LINE L1 2257 2380 -3749 1587 198 125 3 chr5 15974425 15974778 -183655372 + MSTD LTR MaLR 1 396 0 4821 143 37 18 chr5 15974784 15975676 -183654474 + L1MC1 LINE L1 5425 6333 0 471 302 55 23 chr5 15975755 15976318 -183653832 + L1MEd LINE L1 2658 3238 -2891 2238 82 7 0 chr5 15976381 15976661 -183653489 + AluSx SINE Alu 1 282 -30 1633 136 55 16 chr5 15978387 15978695 -183651455 - MER44D DNA MER2_type 0 609 20 276 351 97 9 chr5 15979009 15979123 -183651027 + L2 LINE L2 3137 3260 -12 956 259 8 29 chr5 15979405 15979648 -183650502 + MIR SINE MIR 4 241 -21 239 270 40 10 chr5 15981638 15981738 -183648412 + (TA)n Simple_repeat Simple_repeat 1 103 0 239 257 28 37 chr5 15981800 15981909 -183648241 + (TA)n Simple_repeat Simple_repeat 1 108 0 212 250 0 0 chr5 15982100 15982144 -183648006 - L2 LINE L2 -2 3311 3268 180 200 40 20 chr5 15982624 15982674 -183647476 + L2 LINE L2 3263 3313 0 388 230 20 0 chr5 15984479 15984579 -183645571 + L1MC5 LINE L1 7797 7898 -63 37 0 0 0 chr5 15985341 15985378 -183644772 + AT_rich Low_complexity Low_complexity 1 37 0 30 0 0 0 chr5 15985828 15985858 -183644292 + AT_rich Low_complexity Low_complexity 1 30 0 237 197 33 0 chr5 15986179 15986240 -183643910 + L1MC4 LINE L1 6641 6703 -1339 233 342 13 0 chr5 15986873 15986952 -183643198 - L2 LINE L2 0 3313 3234 1536 201 102 56 chr5 15987214 15987698 -183642452 + MLT1F1 LTR MaLR 7 513 -54 2190 99 13 7 chr5 15987698 15988000 -183642150 - AluSg SINE Alu -6 304 1 1536 201 102 56 chr5 15988000 15988058 -183642092 + MLT1F1 LTR MaLR 513 567 0 1181 125 31 18 chr5 15988866 15989032 -183641118 - L1MA4A LINE L1 0 6303 6132 522 42 111 0 chr5 15989032 15989104 -183641046 - MADE1 DNA Mariner 0 80 1 1181 125 31 18 chr5 15989104 15989161 -183640989 - L1MA4A LINE L1 -171 6132 6077 572 27 0 0 chr5 15990248 15990321 -183639829 + L1PA4 LINE L1 6080 6152 -3 426 79 0 0 chr5 15990645 15990708 -183639442 + (TC)n Simple_repeat Simple_repeat 2 64 0 396 0 0 0 chr5 15990708 15990752 -183639398 + (CA)n Simple_repeat Simple_repeat 1 44 0 2294 99 0 3 chr5 15991678 15991981 -183638169 + AluSx SINE Alu 2 303 -9 2263 85 3 7 chr5 15992994 15993289 -183636861 + AluSq SINE Alu 1 294 -19 238 273 0 136 chr5 15993305 15993415 -183636735 - MIR SINE MIR -104 104 10 564 275 60 64 chr5 15993481 15993626 -183636524 + MIR SINE MIR 12 157 -105 2400 90 3 0 chr5 15993626 15993927 -183636223 + AluSp SINE Alu 1 302 -11 564 275 60 64 chr5 15993927 15994032 -183636118 + MIR SINE MIR 157 261 -1 2188 127 5 42 chr5 15994647 15995024 -183635126 - THE1B LTR MaLR -1 363 1 381 203 0 0 chr5 15995087 15995161 -183634989 + MER81 DNA DNA 10 83 -31 30 27 0 0 chr5 15996303 15996340 -183633810 + AT_rich Low_complexity Low_complexity 1 37 0 2130 90 3 72 chr5 15996445 15996777 -183633373 + AluSc SINE Alu 1 309 0 3923 135 33 19 chr5 15998041 15998743 -183631407 + L1MB2 LINE L1 5457 6168 -3 378 266 53 9 chr5 15999175 15999288 -183630862 + MIR SINE MIR 141 258 -4 578 267 9 59 chr5 15999434 15999655 -183630495 - MER63A DNA MER1_type 0 210 1 292 269 145 0 chr5 16000639 16000784 -183629366 - L1ME4a LINE L1 -1 6120 5955 262 269 76 19 chr5 16001078 16001249 -183628901 - L1ME4a LINE L1 -206 5915 5728 231 200 20 0 chr5 16001329 16001379 -183628771 - L2 LINE L2 -1 3312 3262 192 390 88 48 chr5 16001679 16001974 -183628176 - L2 LINE L2 -367 2947 2641 232 321 124 22 chr5 16002017 16002154 -183627996 - L2 LINE L2 -926 2388 2238 804 221 38 9 chr5 16002160 16002373 -183627777 - MER20 DNA MER1_type 0 219 1 277 256 64 13 chr5 16002460 16002538 -183627612 - MER91B DNA MER1_type -107 83 2 225 188 0 42 chr5 16002543 16002591 -183627559 + L2 LINE L2 3268 3313 0 2269 113 7 0 chr5 16002740 16003040 -183627110 + AluSx SINE Alu 1 302 -10 766 292 144 14 chr5 16003165 16003678 -183626472 + MLT1G1 LTR MaLR 8 587 -8 275 331 47 24 chr5 16003738 16003865 -183626285 - L2 LINE L2 -1480 1834 1705 560 298 36 6 chr5 16005347 16005515 -183624635 + MIR3 SINE MIR 18 190 -18 355 270 88 15 chr5 16006245 16006382 -183623768 - MIR SINE MIR -74 188 42 3349 167 12 78 chr5 16007176 16007920 -183622230 + MER44D DNA MER2_type 10 704 -1 258 348 25 8 chr5 16008328 16008446 -183621704 + L2 LINE L2 3188 3307 -6 22 0 0 0 chr5 16009636 16009658 -183620492 + AT_rich Low_complexity Low_complexity 1 22 0 748 191 23 23 chr5 16009729 16009902 -183620248 - MER5B DNA MER1_type -5 173 1 261 286 78 0 chr5 16010111 16010188 -183619962 + L2 LINE L2 3231 3313 0 1809 158 7 17 chr5 16010306 16010603 -183619547 + AluJo SINE Alu 6 299 -13 2849 117 33 35 chr5 16011679 16012165 -183617985 + MER31A LTR ERV1 1 485 0 233 305 84 130 chr5 16012437 16012745 -183617405 - L2 LINE L2 0 3272 2979 23 0 0 0 chr5 16013425 16013448 -183616702 + AT_rich Low_complexity Low_complexity 1 23 0 1798 160 7 10 chr5 16014831 16015131 -183615019 - AluJb SINE Alu -13 299 1 281 281 11 22 chr5 16016052 16016141 -183614009 - L2 LINE L2 -1 3312 3225 565 204 68 20 chr5 16016164 16016311 -183613839 - MER104 DNA Tc2 -26 154 1 212 313 45 15 chr5 16016560 16016627 -183613523 + MIR SINE MIR 5 73 -189 959 291 10 14 chr5 16017165 16017454 -183612696 + HsTC2b DNA Tc2 64 351 -564 630 243 200 4 chr5 16017450 16017685 -183612465 + HsTC2b DNA Tc2 640 920 0 * 2202 88 32 3 chr5 16019517 16019802 -183610348 - AluSp SINE Alu -20 293 1 2058 148 0 10 chr5 16020435 16020746 -183609404 - AluJo SINE Alu -4 308 1 938 114 0 23 chr5 16022018 16022149 -183608001 - FRAM SINE Alu -24 152 25 21 0 0 0 chr5 16022276 16022297 -183607853 + AT_rich Low_complexity Low_complexity 1 21 0 2281 115 0 6 chr5 16022920 16023234 -183606916 - AluSx SINE Alu 0 312 1 2442 131 91 10 chr5 16024240 16024636 -183605514 + MSTA LTR MaLR 1 428 0 306 218 0 0 chr5 16025531 16025586 -183604564 + L2 LINE L2 3211 3265 -7 36 0 0 0 chr5 16026786 16026822 -183603328 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr5 16027035 16027077 -183603073 + AT_rich Low_complexity Low_complexity 1 42 0 524 292 54 8 chr5 16027195 16027435 -183602715 - L1ME4a LINE L1 -213 5908 5658 274 231 38 127 chr5 16027517 16027729 -183602421 - L1ME4a LINE L1 -2337 5471 5279 1915 120 45 0 chr5 16028183 16028471 -183601679 - AluSx SINE Alu 0 302 3 2286 89 3 3 chr5 16028913 16029205 -183600945 + AluSq SINE Alu 1 292 -21 1015 239 42 5 chr5 16029640 16029853 -183600297 + MER58A DNA MER1_type 4 224 0 27 49 0 0 chr5 16030400 16030441 -183599709 + AT_rich Low_complexity Low_complexity 1 41 0 272 185 0 0 chr5 16030446 16030500 -183599650 - MIR SINE MIR -108 154 101 234 217 0 0 chr5 16030541 16030587 -183599563 - MIR SINE MIR -114 148 103 2344 112 0 0 chr5 16030589 16030901 -183599249 + AluSx SINE Alu 1 312 0 22 35 0 0 chr5 16031128 16031157 -183598993 + AT_rich Low_complexity Low_complexity 1 29 0 1081 129 12 6 chr5 16031235 16031405 -183598745 - L1MA10 LINE L1 -8 6326 6156 21 0 0 0 chr5 16031494 16031515 -183598635 + AT_rich Low_complexity Low_complexity 1 21 0 830 183 102 42 chr5 16031715 16032084 -183598066 - MER31B LTR ERV1 0 466 1 1667 146 25 14 chr5 16032336 16032523 -183597627 + LTR64 LTR ERVK 1 194 -364 2240 85 3 3 chr5 16032523 16032832 -183597318 + AluSx SINE Alu 1 309 0 1667 146 25 14 chr5 16032832 16032924 -183597226 + LTR64 LTR ERVK 194 284 -274 596 121 224 9 chr5 16033025 16033141 -183597009 - AluJo SINE Alu -161 151 11 869 211 211 0 chr5 16033155 16033382 -183596768 + LTR64 LTR ERVK 284 558 0 262 56 0 0 chr5 16034994 16035030 -183595120 - L1PB1 LINE L1 -1 6150 6115 18060 140 62 26 chr5 16035092 16035387 -183594763 - L1PB1 LINE L1 -39 6831 6548 210 71 0 0 chr5 16035387 16035415 -183594735 + (TG)n Simple_repeat Simple_repeat 2 29 0 18060 140 62 26 chr5 16035415 16035982 -183594168 - L1PB1 LINE L1 -322 6548 6003 2080 134 6 13 chr5 16035982 16036296 -183593854 - AluSx SINE Alu 0 312 1 18060 140 62 26 chr5 16036296 16036756 -183593394 - L1PB1 LINE L1 -867 6003 5561 210 37 0 0 chr5 16036756 16036783 -183593367 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 18060 140 62 26 chr5 16036783 16042002 -183588148 - L1PB1 LINE L1 -1309 5561 4 283 95 0 0 chr5 16042051 16042093 -183588057 + FLAM_A SINE Alu 88 129 -4 1884 225 83 7 chr5 16042101 16042545 -183587605 + MLT1D LTR MaLR 28 505 0 291 118 168 27 chr5 16042616 16042712 -183587438 + MIR SINE MIR 40 149 -59 2238 159 21 45 chr5 16042819 16043241 -183586909 + MER65A LTR ERV1 1 412 -33 1831 148 40 3 chr5 16043263 16043560 -183586590 - AluJb SINE Alu -3 309 2 259 204 0 0 chr5 16043560 16043609 -183586541 + MER65A LTR ERV1 397 445 0 1935 145 75 23 chr5 16044207 16044552 -183585598 - THE1B LTR MaLR 0 364 2 242 264 27 109 chr5 16044907 16045017 -183585133 + LTR67 LTR ERVL 100 200 -357 790 231 48 0 chr5 16045026 16045173 -183584977 + FRAM SINE Alu 1 154 -22 2292 197 67 45 chr5 16045368 16045826 -183584324 + MER44D DNA MER2_type 1 447 -2040 198 0 0 0 chr5 16045826 16045848 -183584302 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 294 29 0 0 chr5 16045847 16045882 -183584268 + (CA)n Simple_repeat Simple_repeat 2 36 0 2292 197 67 45 chr5 16045848 16045961 -183584189 + MER44D DNA MER2_type 447 605 0 21 36 0 0 chr5 16046094 16046122 -183584028 + AT_rich Low_complexity Low_complexity 1 28 0 595 185 35 17 chr5 16046513 16046649 -183583501 - MLT1A1 LTR MaLR -2 570 260 1677 190 78 13 chr5 16047343 16047657 -183582493 + MLT2D LTR ERVL 6 351 -63 2123 159 45 0 chr5 16047657 16047990 -183582160 + MER7A DNA MER2_type 1 346 0 1677 190 78 13 chr5 16047990 16048059 -183582091 + MLT2D LTR ERVL 351 414 0 705 307 49 40 chr5 16048103 16048657 -183581493 + L2 LINE L2 2725 3312 -1 * 1346 252 165 57 chr5 16048646 16048969 -183581181 + L2 LINE L2 1700 1987 -1326 2174 108 3 16 chr5 16048969 16049274 -183580876 - AluSc SINE Alu -8 301 1 1346 252 165 57 chr5 16049274 16050383 -183579767 + L2 LINE L2 1987 3308 -5 288 260 78 0 chr5 16050438 16050515 -183579635 + L2 LINE L2 3149 3231 -41 2388 141 16 33 chr5 16050942 16051369 -183578781 + MER95 LTR ERV 7 426 -5 202 401 0 0 chr5 16051608 16051785 -183578365 + (TGAA)n Simple_repeat Simple_repeat 1 177 0 302 360 27 0 chr5 16052125 16052275 -183577875 + MER5B DNA MER1_type 1 154 -24 782 184 7 0 chr5 16052480 16052621 -183577529 - Charlie1 DNA MER1_type 0 2761 2620 427 223 291 0 chr5 16052615 16052790 -183577360 - Charlie1 DNA MER1_type -2534 227 2 * 756 211 94 55 chr5 16053045 16053353 -183576797 + MLT1D LTR MaLR 9 328 -177 5066 41 0 2 chr5 16053353 16053963 -183576187 - L1P LINE L1 -1679 4467 3859 5566 36 0 0 chr5 16053963 16054569 -183575581 + L1PA5 LINE L1 5528 6143 -11 333 0 0 0 chr5 16054570 16054607 -183575543 + (TA)n Simple_repeat Simple_repeat 2 38 0 754 164 26 77 chr5 16054607 16054802 -183575348 + MLT1D LTR MaLR 320 504 -1 357 255 50 56 chr5 16056257 16056418 -183573732 + LTR16C LTR ERVL 332 491 0 2104 92 50 3 chr5 16056711 16056993 -183573157 + AluSx SINE Alu 2 296 -16 2243 108 0 16 chr5 16057556 16057862 -183572288 - AluSx SINE Alu -11 301 1 2216 97 0 23 chr5 16057868 16058167 -183571983 - AluSg SINE Alu -18 292 1 348 219 91 91 chr5 16058436 16058623 -183571527 + L1ME4a LINE L1 5787 5976 -145 2538 63 0 0 chr5 16058623 16058923 -183571227 - AluY SINE Alu -11 300 1 348 219 91 91 chr5 16058923 16059022 -183571128 + L1ME4a LINE L1 5975 6073 -48 1156 211 9 5 chr5 16059033 16059251 -183570899 - MIR SINE MIR -26 236 18 195 139 0 0 chr5 16059293 16059329 -183570821 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 2368 87 0 3 chr5 16059411 16059722 -183570428 + AluY SINE Alu 1 310 -1 2202 122 3 0 chr5 16059726 16060030 -183570120 + AluSq SINE Alu 1 305 -8 738 119 22 0 chr5 16060626 16060760 -183569390 + GA-rich Low_complexity Low_complexity 3 139 0 1887 223 57 94 chr5 16064641 16065382 -183564768 - MER69B DNA AcHobo -9 1217 505 392 145 36 36 chr5 16065401 16065484 -183564666 - MLT1A1 LTR MaLR -282 83 1 4045 196 63 20 chr5 16065492 16066304 -183563846 - MLT1A1-int LTR MaLR -2 1733 887 3382 118 58 74 chr5 16066308 16066670 -183563480 - MLT1A1-int LTR MaLR -1107 628 243 280 0 28 0 chr5 16066670 16066706 -183563444 - tRNA-Cys-TGC tRNA tRNA -38 37 1 3382 118 58 74 chr5 16066706 16066946 -183563204 - MLT1A1-int LTR MaLR -1492 243 1 1635 206 13 68 chr5 16066946 16067031 -183563119 - MLT1A1 LTR MaLR 0 365 277 2380 101 0 0 chr5 16067031 16067327 -183562823 - AluSx SINE Alu -16 296 1 1635 206 13 68 chr5 16067327 16067625 -183562525 - MLT1A1 LTR MaLR -88 277 3 518 162 179 0 chr5 16067629 16067746 -183562404 - MER69B DNA AcHobo -1087 139 2 2209 119 0 0 chr5 16068061 16068355 -183561795 - AluSx SINE Alu -18 294 1 3841 169 34 18 chr5 16068382 16069120 -183561030 - L1MB1 LINE L1 -1 6167 5418 1513 201 87 47 chr5 16069207 16069654 -183560496 + MLT1C LTR MaLR 1 465 -2 703 102 17 17 chr5 16069656 16069774 -183560376 - L1P LINE L1 -747 5419 5302 4585 129 17 8 chr5 16069774 16070496 -183559654 + L1PA16 LINE L1 5438 6166 0 2339 96 3 19 chr5 16070532 16070845 -183559305 - AluY SINE Alu -3 308 1 192 77 0 0 chr5 16070848 16070874 -183559276 + (T)n Simple_repeat Simple_repeat 1 26 0 2209 116 0 0 chr5 16071087 16071379 -183558771 - AluSc SINE Alu -17 292 1 27 0 0 0 chr5 16072006 16072033 -183558117 + AT_rich Low_complexity Low_complexity 1 27 0 883 211 161 70 chr5 16072724 16073269 -183556881 + MLT1G1 LTR MaLR 1 595 0 328 254 91 0 chr5 16073721 16073831 -183556319 + MIR SINE MIR 25 144 -64 374 300 33 0 chr5 16073936 16074056 -183556094 + MIR3 SINE MIR 54 177 -31 323 308 8 38 chr5 16075308 16075441 -183554709 + MIR SINE MIR 13 141 -121 1882 179 54 14 chr5 16075518 16075887 -183554263 - MLT1B LTR MaLR -6 384 1 271 244 24 12 chr5 16076245 16076327 -183553823 + L2 LINE L2 3197 3279 -34 2282 119 3 0 chr5 16077073 16077384 -183552766 + AluSx SINE Alu 1 312 0 225 239 25 25 chr5 16077421 16077522 -183552628 + GA-rich Low_complexity Low_complexity 2 105 -55 1874 115 28 65 chr5 16077522 16077843 -183552307 + AluSx SINE Alu 1 309 -3 225 239 25 25 chr5 16077843 16077900 -183552250 + GA-rich Low_complexity Low_complexity 104 160 0 229 229 0 43 chr5 16077909 16077979 -183552171 + L2 LINE L2 3246 3312 -1 524 245 123 19 chr5 16079095 16079356 -183550794 - L1ME4a LINE L1 -2 6119 5832 195 69 0 0 chr5 16081036 16081065 -183549085 + (CGCGG)n Simple_repeat Simple_repeat 3 31 0 1593 115 24 77 chr5 16081588 16081926 -183548224 - MER33 DNA MER1_type 0 324 5 3342 131 10 4 chr5 16081939 16082429 -183547721 - MER1A DNA MER1_type 0 529 37 2245 94 3 7 chr5 16082540 16082837 -183547313 - AluSq SINE Alu -17 296 1 2045 118 20 10 chr5 16082837 16083134 -183547016 - AluSx SINE Alu -12 300 1 302 264 65 52 chr5 16083593 16083748 -183546402 - MIR SINE MIR -47 215 59 2204 125 0 0 chr5 16084491 16084780 -183545370 - AluSx SINE Alu -23 289 1 209 241 69 0 chr5 16084848 16084906 -183545244 + L2 LINE L2 3244 3305 -8 2368 108 10 0 chr5 16085059 16085366 -183544784 + AluSg SINE Alu 1 310 0 244 306 0 0 chr5 16085407 16085469 -183544681 - MIR SINE MIR -105 103 42 826 292 58 65 chr5 16087022 16087574 -183542576 + LTR67 LTR ERVL 2 549 -8 5603 125 2 6 chr5 16087579 16088443 -183541707 - L1P LINE L1 -1033 5113 4253 2195 108 35 20 chr5 16088443 16088772 -183541378 + L1PA10 LINE L1 5817 6164 -4 237 214 0 18 chr5 16089062 16089118 -183541032 - MLT2C1 LTR ERVL -2 518 464 420 20 0 0 chr5 16089134 16089183 -183540967 + (CA)n Simple_repeat Simple_repeat 1 49 0 739 229 78 0 chr5 16089209 16089375 -183540775 - MLT2C1 LTR ERVL -40 357 179 778 163 23 8 chr5 16089863 16089992 -183540158 + AluJ SINE Alu 5 135 -177 7143 23 0 1 chr5 16089992 16090807 -183539343 - L1PA4 LINE L1 -4 6151 5338 914 216 0 0 chr5 16090808 16090975 -183539175 + AluJ SINE Alu 134 300 -12 693 248 40 0 chr5 16091308 16091510 -183538640 + LTR37B LTR ERV1 4 213 -255 438 204 0 45 chr5 16091574 16091662 -183538488 + FLAM_A SINE Alu 36 119 -23 186 133 0 0 chr5 16091675 16091705 -183538445 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 239 22 43 chr5 16091706 16091798 -183538352 + L1MC4 LINE L1 6614 6703 -1339 253 278 0 0 chr5 16091798 16091870 -183538280 + LTR37B LTR ERV1 217 288 -180 329 204 54 0 chr5 16091916 16092009 -183538141 + LTR37B LTR ERV1 368 465 -3 1319 218 35 58 chr5 16092963 16093362 -183536788 - MLT1B LTR MaLR 0 390 1 198 316 231 0 chr5 16093464 16093581 -183536569 - L2 LINE L2 0 3272 3129 2153 122 3 7 chr5 16094101 16094396 -183535754 - AluSx SINE Alu -18 294 1 32 43 0 0 chr5 16094457 16094503 -183535647 + AT_rich Low_complexity Low_complexity 1 46 0 208 158 0 26 chr5 16095104 16095142 -183535008 + (TG)n Simple_repeat Simple_repeat 2 38 0 2307 116 0 0 chr5 16095891 16096192 -183533958 - AluSx SINE Alu -11 301 1 3759 164 13 80 chr5 16097083 16097801 -183532349 + L1MB8 LINE L1 5382 6036 -142 1874 148 32 3 chr5 16097801 16098085 -183532065 + AluJb SINE Alu 1 292 -20 3759 164 13 80 chr5 16098085 16098219 -183531931 + L1MB8 LINE L1 6036 6177 -1 208 327 69 40 chr5 16099498 16099700 -183530450 + L2 LINE L2 1168 1375 -1939 598 256 63 5 chr5 16099906 16100097 -183530053 + MIR SINE MIR 51 252 -10 200 203 62 16 chr5 16100114 16100178 -183529972 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 1420 120 0 0 chr5 16100212 16100396 -183529754 - AluSg SINE Alu -126 184 1 269 290 206 0 chr5 16100984 16101091 -183529059 - MER94 DNA DNA -4 130 2 243 319 33 44 chr5 16101326 16101508 -183528642 + L2 LINE L2 2221 2400 -914 228 320 70 33 chr5 16101756 16102000 -183528150 + L2 LINE L2 1789 2041 -1273 218 277 89 0 chr5 16102000 16102112 -183528038 - L2 LINE L2 -917 2397 2276 528 156 11 0 chr5 16102117 16102207 -183527943 - MER3 DNA MER1_type 0 209 119 387 206 0 0 chr5 16102650 16102723 -183527427 + L2 LINE L2 3240 3312 -1 257 109 22 0 chr5 16102724 16102770 -183527380 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 291 280 127 38 chr5 16103505 16103564 -183526586 - MIR SINE MIR -67 195 143 2247 108 76 15 chr5 16103564 16103907 -183526243 - THE1B LTR MaLR 0 364 1 291 280 127 38 chr5 16103907 16104004 -183526146 - MIR SINE MIR -119 143 25 1399 228 13 0 chr5 16104270 16104568 -183525582 + MLT1H1 LTR MaLR 254 555 0 249 338 45 15 chr5 16105513 16105646 -183524504 - L3b LINE CR1 -8 1575 1439 227 167 48 0 chr5 16105770 16105812 -183524338 - MER91 DNA MER1_type -11 185 142 1183 183 19 60 chr5 16106870 16107098 -183523052 + L1MB5 LINE L1 5912 6129 -45 2281 99 3 0 chr5 16107098 16107392 -183522758 + AluSx SINE Alu 1 295 -17 1183 183 19 60 chr5 16107392 16107431 -183522719 + L1MB5 LINE L1 6129 6168 -6 293 103 0 0 chr5 16107480 16107519 -183522631 + Charlie8 DNA MER1_type 123 161 -2256 1405 205 88 57 chr5 16107907 16108360 -183521790 - MLT1C LTR MaLR 0 467 1 354 233 35 0 chr5 16108401 16108487 -183521663 + L2 LINE L2 3206 3294 -19 325 274 26 26 chr5 16108895 16109008 -183521142 + MER5A DNA MER1_type 2 114 -75 749 297 40 11 chr5 16109257 16109533 -183520617 + MLT1L LTR MaLR 7 290 -325 2277 170 60 44 chr5 16109660 16110159 -183519991 - LTR53 LTR ERVL -2 517 11 262 111 0 0 chr5 16110514 16110550 -183519600 + LTR16C LTR ERVL 456 491 0 2121 121 46 35 chr5 16111478 16111849 -183518301 + THE1C LTR MaLR 1 375 0 264 206 44 15 chr5 16112131 16112199 -183517951 + MIR SINE MIR 79 148 -114 735 199 18 47 chr5 16112205 16112376 -183517774 + MER45A DNA AcHobo 6 171 -7 2104 139 0 0 chr5 16112473 16112761 -183517389 + AluJb SINE Alu 1 317 0 189 35 35 0 chr5 16112761 16112790 -183517360 + (TAAA)n Simple_repeat Simple_repeat 1 180 0 414 256 62 23 chr5 16113259 16113388 -183516762 + MER46C DNA MER2_type 4 137 -201 1701 186 0 4 chr5 16113461 16113741 -183516409 + AluJb SINE Alu 1 279 -33 1058 99 0 8 chr5 16113742 16114009 -183516141 + (GAAA)n Simple_repeat Simple_repeat 1 264 0 292 213 33 0 chr5 16114009 16114070 -183516080 + MER46C DNA MER2_type 275 337 -1 2105 122 3 16 chr5 16114143 16114455 -183515695 + AluSq SINE Alu 1 308 -5 2673 144 32 18 chr5 16114461 16114960 -183515190 + L1MB3 LINE L1 5668 6173 -10 2175 114 0 10 chr5 16114960 16115266 -183514884 - AluSc SINE Alu -6 303 1 2011 195 54 40 chr5 16115685 16116183 -183513967 - MLT1D LTR MaLR 0 505 1 2358 81 14 0 chr5 16116223 16116392 -183513758 - AluY SINE Alu -11 300 124 252 0 0 0 chr5 16116392 16116420 -183513730 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2358 81 14 0 chr5 16116420 16116546 -183513604 - AluY SINE Alu -187 124 1 1257 285 101 41 chr5 16116713 16117250 -183512900 + L1ME2 LINE L1 1 569 -5550 917 216 33 29 chr5 16118020 16118293 -183511857 + L1ME2 LINE L1 4388 4661 -1468 602 174 36 151 chr5 16118302 16118392 -183511758 - LTR16B LTR ERVL 0 464 412 2266 115 0 0 chr5 16118392 16118687 -183511463 + AluSq SINE Alu 1 295 -18 602 174 36 151 chr5 16118687 16118815 -183511335 - LTR16B LTR ERVL -52 412 271 387 228 48 120 chr5 16118861 16119028 -183511122 - LTR16B LTR ERVL -307 157 3 3144 225 77 28 chr5 16119028 16119454 -183510696 + L1ME2 LINE L1 4665 5069 -1078 1690 66 5 5 chr5 16119454 16119665 -183510485 + AluY SINE Alu 92 302 -9 3144 225 77 28 chr5 16119665 16120636 -183509514 + L1ME2 LINE L1 5069 6138 -9 987 164 7 0 chr5 16120675 16120827 -183509323 + AluJb SINE Alu 137 289 -23 2310 92 16 7 chr5 16121028 16121333 -183508817 - AluSq SINE Alu -5 308 1 1984 255 73 43 chr5 16121446 16122229 -183507921 - L2 LINE L2 -3 3310 2473 2198 117 3 32 chr5 16122229 16122545 -183507605 + AluSx SINE Alu 6 312 0 1984 255 73 43 chr5 16122545 16122735 -183507415 - L2 LINE L2 -840 2473 2290 5001 113 54 22 chr5 16122735 16122912 -183507238 + Tigger3(Golem) DNA MER2_type 2188 2358 -670 2376 78 3 3 chr5 16122912 16123207 -183506943 + AluSq SINE Alu 1 295 -18 5001 113 54 22 chr5 16123207 16123844 -183506306 + Tigger3(Golem) DNA MER2_type 2358 3028 0 285 61 61 61 chr5 16123844 16123893 -183506257 + MLT2B1 LTR ERVL 472 520 0 300 242 161 32 chr5 16123894 16124080 -183506070 - L2 LINE L2 -2208 1106 897 1160 194 24 0 chr5 16125095 16125306 -183504844 + MER20 DNA MER1_type 2 217 -2 2081 149 28 3 chr5 16125398 16125761 -183504389 + L1PA16 LINE L1 5794 6165 -1 184 255 117 43 chr5 16125770 16125864 -183504286 - MIR SINE MIR -157 105 5 2526 49 0 0 chr5 16125891 16126179 -183503971 + AluY SINE Alu 19 306 -5 736 211 31 6 chr5 16126416 16126577 -183503573 + MIR SINE MIR 76 240 -22 2900 173 59 2 chr5 16127299 16127876 -183502274 - L1MB5 LINE L1 -13 6161 5552 376 316 153 4 chr5 16127985 16128213 -183501937 + MIR SINE MIR 1 262 0 347 253 0 0 chr5 16128463 16128558 -183501592 - L2 LINE L2 0 3313 3219 542 182 0 10 chr5 16128558 16128657 -183501493 + MER4A LTR ERV1 1 98 -566 1551 145 155 97 chr5 16128657 16129037 -183501113 + MER4A LTR ERV1 263 664 0 224 224 69 0 chr5 16129038 16129096 -183501054 - L2 LINE L2 -92 3221 3160 452 297 109 17 chr5 16129097 16129150 -183501000 - MIR SINE MIR 0 262 215 1107 237 0 18 chr5 16129150 16129378 -183500772 + MER58A DNA MER1_type 1 224 0 452 297 109 17 chr5 16129378 16129563 -183500587 - MIR SINE MIR -47 215 2 457 317 145 25 chr5 16129710 16130186 -183499964 - L2 LINE L2 -347 2967 2435 334 158 0 18 chr5 16130480 16130537 -183499613 - LTR67 LTR ERVL -388 169 114 284 125 0 94 chr5 16130496 16130560 -183499590 - MLT1J LTR MaLR -363 148 91 * 2224 92 0 10 chr5 16130627 16130921 -183499229 + AluSx SINE Alu 1 291 -21 245 327 36 0 chr5 16131012 16131122 -183499028 - L2 LINE L2 -893 2421 2308 26 64 0 0 chr5 16131328 16131375 -183498775 + AT_rich Low_complexity Low_complexity 1 47 0 2552 205 58 45 chr5 16131672 16132879 -183497271 + L1ME1 LINE L1 4603 5869 -309 413 218 0 0 chr5 16132883 16132970 -183497180 - MER119 DNA MER1_type -36 547 461 * 454 296 114 0 chr5 16132964 16133096 -183497054 - MER119 DNA MER1_type -436 147 1 641 196 120 48 chr5 16133096 16133305 -183496845 + L1ME1 LINE L1 5938 6161 -5 1510 139 4 24 chr5 16133318 16133569 -183496581 + AluJo SINE Alu 31 276 -36 2191 121 3 3 chr5 16133570 16133875 -183496275 + AluSp SINE Alu 1 305 -8 206 108 54 0 chr5 16133890 16133927 -183496223 + A-rich Low_complexity Low_complexity 2 40 0 466 272 58 5 chr5 16134439 16134630 -183495520 - MIR SINE MIR -5 257 57 463 216 32 32 chr5 16135488 16135613 -183494537 - MER94 DNA DNA -9 125 1 764 228 19 0 chr5 16135723 16135885 -183494265 + MER33 DNA MER1_type 1 165 -159 1116 136 0 0 chr5 16135885 16136039 -183494111 + AluJb SINE Alu 133 286 -26 2021 127 3 10 chr5 16136108 16136399 -183493751 - AluSx SINE Alu -19 293 5 1722 159 3 28 chr5 16136405 16136688 -183493462 - AluJo SINE Alu -21 291 16 467 180 150 0 chr5 16136757 16136857 -183493293 + MER33 DNA MER1_type 210 324 0 2311 109 0 0 chr5 16136978 16137281 -183492869 + AluSg SINE Alu 1 303 -7 301 250 25 0 chr5 16137292 16137372 -183492778 + GA-rich Low_complexity Low_complexity 2 83 0 458 232 10 10 chr5 16138537 16138636 -183491514 + MER99 DNA DNA 3 101 -727 988 195 0 0 chr5 16138643 16138807 -183491343 - AluJb SINE Alu -11 301 138 2226 114 3 0 chr5 16138891 16139188 -183490962 - AluSx SINE Alu -14 298 1 2766 199 41 30 chr5 16139193 16139609 -183490541 + MER99 DNA DNA 158 585 -243 1946 200 15 10 chr5 16139609 16139999 -183490151 - MSTD LTR MaLR -2 394 3 2766 199 41 30 chr5 16139999 16140241 -183489909 + MER99 DNA DNA 585 823 -5 192 317 99 76 chr5 16140404 16140666 -183489484 - L2 LINE L2 0 3272 3005 244 68 23 23 chr5 16141310 16141354 -183488796 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 379 264 60 36 chr5 16141738 16141905 -183488245 + L1ME2 LINE L1 5404 5574 -592 747 294 54 59 chr5 16141922 16141980 -183488170 - LTR16A LTR ERVL -10 440 383 2309 111 0 0 chr5 16141980 16142278 -183487872 + AluSx SINE Alu 1 298 -14 747 294 54 59 chr5 16142278 16142573 -183487577 - LTR16A LTR ERVL -67 383 89 334 314 64 50 chr5 16142577 16142860 -183487290 + L1ME2 LINE L1 5591 5877 -287 207 100 0 0 chr5 16143306 16143336 -183486814 + (CA)n Simple_repeat Simple_repeat 1 30 0 1521 208 0 40 chr5 16143919 16144222 -183485928 + AluJo SINE Alu 1 291 -21 325 301 0 11 chr5 16144363 16144456 -183485694 - MLT1I LTR MaLR 0 409 318 1025 231 98 11 chr5 16144501 16144787 -183485363 - MLT1C LTR MaLR -141 326 16 382 274 52 7 chr5 16144814 16144949 -183485201 - MLT1J2 LTR MaLR -236 214 74 619 42 0 0 chr5 16146109 16146180 -183483970 + MER30 DNA MER1_type 12 82 -148 1859 136 7 23 chr5 16146183 16146485 -183483665 + AluSx SINE Alu 1 297 -15 968 155 19 0 chr5 16146510 16146671 -183483479 + MER30 DNA MER1_type 66 229 -1 1727 136 48 22 chr5 16147228 16147501 -183482649 + AluJo SINE Alu 11 290 -22 2237 105 3 0 chr5 16147661 16147955 -183482195 + AluSx SINE Alu 5 299 -13 249 146 0 42 chr5 16148007 16148055 -183482095 + Alu SINE Alu 234 274 -29 250 192 24 40 chr5 16148078 16148203 -183481947 + (TAAA)n Simple_repeat Simple_repeat 1 123 0 1131 167 51 0 chr5 16148203 16148418 -183481732 + L1PB4 LINE L1 5922 6147 -9 2248 91 3 3 chr5 16148418 16148703 -183481447 - AluY SINE Alu -21 290 6 740 215 0 6 chr5 16149275 16149447 -183480703 - Charlie1 DNA MER1_type 0 2761 2591 848 141 78 0 chr5 16149455 16149597 -183480553 - AluJb SINE Alu -22 290 138 1805 141 0 59 chr5 16149619 16149925 -183480225 - AluJb SINE Alu -24 288 1 189 86 99 12 chr5 16149984 16150065 -183480085 + (TATAA)n Simple_repeat Simple_repeat 3 90 0 1054 239 62 7 chr5 16150084 16150393 -183479757 - Charlie1 DNA MER1_type -147 2614 2289 1219 107 6 0 chr5 16150493 16150652 -183479498 - AluSx SINE Alu -148 164 5 1678 161 7 28 chr5 16150658 16150943 -183479207 - AluJo SINE Alu -21 291 13 467 180 150 0 chr5 16150991 16151091 -183479059 + Charlie5 DNA MER1_type 2510 2624 0 2327 108 0 0 chr5 16151212 16151517 -183478633 + AluSg SINE Alu 1 305 -5 301 250 25 0 chr5 16151529 16151609 -183478541 + GA-rich Low_complexity Low_complexity 2 83 0 470 222 10 10 chr5 16152774 16152873 -183477277 + MER99 DNA DNA 3 101 -727 952 200 0 0 chr5 16152880 16153040 -183477110 - AluJb SINE Alu -15 297 138 2226 114 3 0 chr5 16153124 16153421 -183476729 - AluSx SINE Alu -14 298 1 2766 199 41 30 chr5 16153426 16153842 -183476308 + MER99 DNA DNA 158 585 -243 1946 200 15 10 chr5 16153842 16154232 -183475918 - MSTD LTR MaLR -2 394 3 2766 199 41 30 chr5 16154232 16154474 -183475676 + MER99 DNA DNA 585 823 -5 192 317 99 76 chr5 16154637 16154899 -183475251 - L2 LINE L2 0 3272 3005 244 68 23 23 chr5 16155543 16155587 -183474563 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 379 264 60 36 chr5 16155971 16156138 -183474012 + L1ME2 LINE L1 5404 5574 -592 747 294 54 59 chr5 16156155 16156213 -183473937 - LTR16A LTR ERVL -10 440 383 2309 111 0 0 chr5 16156213 16156511 -183473639 + AluSx SINE Alu 1 298 -14 747 294 54 59 chr5 16156511 16156806 -183473344 - LTR16A LTR ERVL -67 383 89 334 314 64 50 chr5 16156810 16157093 -183473057 + L1ME2 LINE L1 5591 5877 -287 207 100 0 0 chr5 16157540 16157570 -183472580 + (CA)n Simple_repeat Simple_repeat 1 30 0 1527 209 0 36 chr5 16158150 16158452 -183471698 + AluJo SINE Alu 1 291 -21 325 301 0 11 chr5 16158592 16158685 -183471465 - MLT1I LTR MaLR 0 409 318 1007 234 98 11 chr5 16158730 16159016 -183471134 - MLT1C LTR MaLR -141 326 16 379 263 45 8 chr5 16159045 16159178 -183470972 - MLT1J2 LTR MaLR -239 211 74 1362 99 12 115 chr5 16160338 16160411 -183469739 + MER30 DNA MER1_type 12 91 -139 2062 146 3 0 chr5 16160411 16160720 -183469430 + AluSx SINE Alu 1 310 -2 1362 99 12 115 chr5 16160720 16160889 -183469261 + MER30 DNA MER1_type 91 229 -1 1696 139 48 22 chr5 16161446 16161719 -183468431 + AluJo SINE Alu 11 290 -22 2237 105 3 0 chr5 16161879 16162173 -183467977 + AluSx SINE Alu 5 299 -13 234 171 0 0 chr5 16162232 16162273 -183467877 + Alu SINE Alu 234 274 -29 250 192 24 40 chr5 16162296 16162421 -183467729 + (TAAA)n Simple_repeat Simple_repeat 1 123 0 1207 166 42 0 chr5 16162421 16162638 -183467512 + L1PB4 LINE L1 5922 6147 -9 2248 91 3 3 chr5 16162638 16162923 -183467227 - AluY SINE Alu -21 290 6 750 209 0 6 chr5 16163495 16163667 -183466483 - Charlie1a DNA MER1_type 0 1455 1285 848 141 78 0 chr5 16163675 16163817 -183466333 - AluJb SINE Alu -22 290 138 1762 141 3 59 chr5 16163839 16164144 -183466006 - AluJb SINE Alu -24 288 1 189 86 99 12 chr5 16164203 16164284 -183465866 + (TATAA)n Simple_repeat Simple_repeat 3 90 0 4897 206 64 25 chr5 16164303 16164836 -183465314 - Charlie1a DNA MER1_type -1453 1308 797 2414 66 7 3 chr5 16164836 16165137 -183465013 - AluSp SINE Alu -11 302 1 4897 206 64 25 chr5 16165137 16165860 -183464290 - Charlie1a DNA MER1_type -1964 797 3 1081 252 52 14 chr5 16165915 16166205 -183463945 - LTR16C LTR ERVL -4 487 187 429 316 47 57 chr5 16166242 16166625 -183463525 + L2 LINE L2 2935 3313 0 207 0 0 0 chr5 16167179 16167202 -183462948 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 566 284 14 32 chr5 16168937 16169155 -183460995 - MIR SINE MIR -22 240 27 2464 42 0 11 chr5 16169373 16169696 -183460454 + AluY SINE Alu 1 320 0 1777 158 9 29 chr5 16170041 16170357 -183459793 + AluJo SINE Alu 1 310 -2 2346 89 7 0 chr5 16171075 16171366 -183458784 + AluSq SINE Alu 1 293 -20 2593 208 66 36 chr5 16172009 16172210 -183457940 + L1MC4 LINE L1 6812 7005 -1037 2276 98 7 0 chr5 16172210 16172506 -183457644 + AluSx SINE Alu 1 298 -14 2593 208 66 36 chr5 16172506 16172998 -183457152 + L1MC4 LINE L1 7005 7526 -516 2340 82 0 14 chr5 16173098 16173392 -183456758 + AluSx SINE Alu 23 312 0 1168 224 98 90 chr5 16173392 16173901 -183456249 + L1MC4 LINE L1 7518 8030 -12 241 277 96 21 chr5 16174390 16174484 -183455666 + MLT1H LTR MaLR 432 532 -17 2211 95 0 7 chr5 16174496 16174812 -183455338 + AluSq SINE Alu 1 314 0 1992 130 3 14 chr5 16174892 16175184 -183454966 + AluJo SINE Alu 9 297 -15 2524 73 0 3 chr5 16175911 16176214 -183453936 + AluSq SINE Alu 1 302 -11 229 291 23 35 chr5 16177935 16178021 -183452129 - MIR SINE MIR -163 99 15 2265 110 10 3 chr5 16179128 16179438 -183450712 - AluSx SINE Alu 0 312 1 6200 192 49 20 chr5 16179592 16181057 -183449093 + L1MB7 LINE L1 3960 5516 -668 2360 115 0 0 chr5 16181057 16181369 -183448781 + AluSx SINE Alu 1 312 0 6200 192 49 20 chr5 16181369 16182059 -183448091 + L1MB7 LINE L1 5516 6184 0 1965 161 0 0 chr5 16182122 16182414 -183447736 - AluJb SINE Alu -20 292 1 587 273 113 30 chr5 16182442 16182673 -183447477 + MLT1L LTR MaLR 1 250 -365 681 212 8 8 chr5 16182724 16182856 -183447294 + FRAM SINE Alu 1 132 -44 1015 123 0 11 chr5 16182859 16183038 -183447112 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 2220 136 3 0 chr5 16183583 16183892 -183446258 - AluSx SINE Alu -2 310 1 2160 81 33 0 chr5 16184438 16184709 -183445441 + AluSc SINE Alu 8 287 -22 1395 177 52 30 chr5 16184726 16184997 -183445153 + AluJo SINE Alu 1 277 -35 2431 100 0 0 chr5 16184998 16185309 -183444841 - AluSx SINE Alu -1 311 1 5609 208 52 16 chr5 16185356 16186577 -183443573 + L1M4b LINE L1 90 1353 -5506 1014 224 66 68 chr5 16186600 16187081 -183443069 + LTR10B LTR ERV1 17 542 -4 869 198 5 11 chr5 16187099 16187286 -183442864 + L1M4b LINE L1 1349 1534 -5325 2359 96 0 0 chr5 16187286 16187587 -183442563 + AluY SINE Alu 1 301 -10 246 266 21 21 chr5 16187612 16187706 -183442444 + L1M4b LINE L1 2630 2723 -4415 316 255 6 89 chr5 16187723 16187880 -183442270 + L1MEc LINE L1 1762 1905 -4491 2001 147 3 0 chr5 16187971 16188263 -183441887 - AluSx SINE Alu -19 293 1 2338 86 3 49 chr5 16188888 16189215 -183440935 + AluSp SINE Alu 1 312 -1 2051 141 0 26 chr5 16190039 16190351 -183439799 - AluSx SINE Alu -8 304 1 314 216 0 108 chr5 16190605 16190744 -183439406 - L1MEd LINE L1 -4865 1254 1131 1005 213 126 48 chr5 16190965 16191322 -183438828 - L1ME2 LINE L1 -16 6148 5764 189 404 27 14 chr5 16191579 16191725 -183438425 + L2 LINE L2 3102 3249 -23 345 305 0 11 chr5 16192837 16192932 -183437218 - MIR SINE MIR -66 142 49 625 269 13 118 chr5 16194250 16194555 -183435595 + MLT1J LTR MaLR 156 428 -83 218 274 0 0 chr5 16195055 16195106 -183435044 + GA-rich Low_complexity Low_complexity 4 54 0 189 0 0 0 chr5 16195117 16195138 -183435012 + (AATAG)n Simple_repeat Simple_repeat 2 22 0 2192 121 3 16 chr5 16195330 16195644 -183434506 + MER1B DNA MER1_type 30 339 0 663 224 12 47 chr5 16195644 16195814 -183434336 - MIR SINE MIR -64 198 35 427 254 25 25 chr5 16195912 16196034 -183434116 + L2 LINE L2 3191 3312 -1 248 198 136 25 chr5 16196255 16196336 -183433814 - MIR SINE MIR -50 212 123 756 248 135 56 chr5 16196558 16197084 -183433066 - MLT1G1 LTR MaLR -38 529 1 2111 103 11 0 chr5 16197548 16197867 -183432283 - AluSc SINE Alu 0 327 6 3179 153 9 22 chr5 16198697 16199234 -183430916 - LTR26B LTR ERV1 0 531 2 1874 227 74 16 chr5 16199370 16199779 -183430371 - MLT2B2 LTR ERVL -2 513 70 2614 62 0 0 chr5 16199779 16200087 -183430063 - AluY SINE Alu -3 308 1 1874 227 74 16 chr5 16200087 16200162 -183429988 - MLT2B2 LTR ERVL -445 70 1 320 318 26 0 chr5 16200223 16200374 -183429776 + MIR SINE MIR 98 252 -10 2258 105 0 0 chr5 16200405 16200712 -183429438 + AluSq SINE Alu 1 307 0 389 229 28 28 chr5 16201101 16201210 -183428940 - L2 LINE L2 -1 3312 3204 323 257 176 20 chr5 16201210 16201358 -183428792 - MARNA DNA Mariner -208 378 208 245 253 44 66 chr5 16201487 16201578 -183428572 - L1ME4a LINE L1 -73 6048 5960 426 309 16 0 chr5 16201774 16201897 -183428253 - MARNA DNA Mariner -393 193 69 1941 157 3 10 chr5 16203981 16204280 -183425870 + AluSx SINE Alu 3 299 -13 1118 194 144 19 chr5 16204771 16204926 -183425224 - AluJo SINE Alu -10 302 168 297 0 0 0 chr5 16204926 16204959 -183425191 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1118 194 144 19 chr5 16204959 16205066 -183425084 - AluJo SINE Alu -144 168 7 640 236 176 5 chr5 16205570 16205769 -183424381 - LTR16A LTR ERVL -193 257 25 2068 130 0 13 chr5 16206049 16206185 -183423965 + AluSx SINE Alu 1 137 -175 2252 112 3 0 chr5 16206185 16206481 -183423669 + AluSq SINE Alu 1 297 -16 2068 130 0 13 chr5 16206481 16206645 -183423505 + AluSx SINE Alu 137 297 -15 275 341 134 29 chr5 16206812 16207372 -183422778 - L2 LINE L2 -692 2622 2004 203 244 12 24 chr5 16207880 16207962 -183422188 - L2 LINE L2 -1442 1872 1792 2352 89 7 0 chr5 16208293 16208586 -183421564 + AluSp SINE Alu 1 295 -18 411 207 189 9 chr5 16208677 16208794 -183421356 - MLT1I LTR MaLR 0 446 277 398 194 61 31 chr5 16208889 16208987 -183421163 - MLT1J2 LTR MaLR -331 119 19 2434 89 0 6 chr5 16209192 16209506 -183420644 - AluSq SINE Alu 0 313 2 191 209 93 0 chr5 16209590 16209633 -183420517 + L2 LINE L2 3257 3303 -10 2034 106 40 0 chr5 16210684 16210987 -183419163 - AluSq SINE Alu 0 314 1 459 291 115 0 chr5 16211329 16211511 -183418639 - MIR SINE MIR -56 206 4 582 104 0 0 chr5 16211673 16211769 -183418381 + (TCCA)n Simple_repeat Simple_repeat 3 98 0 732 226 58 5 chr5 16214347 16214541 -183415609 - MIR SINE MIR -56 206 3 1701 201 0 0 chr5 16214576 16214878 -183415272 - AluJo SINE Alu -13 299 1 2084 113 31 7 chr5 16214941 16215232 -183414918 - AluSx SINE Alu -14 298 1 700 290 34 0 chr5 16215661 16215868 -183414282 + LTR33 LTR ERVL 1 214 -307 3986 171 23 32 chr5 16216470 16216581 -183413569 - L1MB7 LINE L1 -11 6173 6063 2156 96 0 0 chr5 16216581 16216861 -183413289 - AluSx SINE Alu -24 288 9 3986 171 23 32 chr5 16216861 16217233 -183412917 - L1MB7 LINE L1 -121 6063 5697 1621 161 12 43 chr5 16217233 16217555 -183412595 + AluJo SINE Alu 1 312 0 3986 171 23 32 chr5 16217555 16217890 -183412260 - L1MB7 LINE L1 -487 5697 5361 252 297 0 0 chr5 16217900 16217964 -183412186 - MER46C DNA MER2_type -3 335 272 2383 121 19 16 chr5 16219031 16219404 -183410746 + THE1C LTR MaLR 1 374 -1 335 217 0 0 chr5 16219684 16219744 -183410406 - MIR SINE MIR -107 101 42 818 293 111 40 chr5 16220413 16220614 -183409536 + L2 LINE L2 2771 2956 -357 2178 112 0 0 chr5 16220614 16220909 -183409241 - AluSx SINE Alu -16 296 2 818 293 111 40 chr5 16220909 16221207 -183408943 + L2 LINE L2 2956 3313 0 860 196 33 0 chr5 16221411 16221564 -183408586 - FRAM SINE Alu -5 161 4 231 167 0 0 chr5 16222119 16222161 -183407989 + (CA)n Simple_repeat Simple_repeat 2 43 0 2214 87 0 3 chr5 16223319 16223628 -183406522 - AluY SINE Alu -3 308 1 2253 62 31 0 chr5 16223630 16223920 -183406230 - AluSc SINE Alu -10 299 1 6530 168 28 54 chr5 16224492 16225923 -183404227 - L1MC3 LINE L1 -2 7783 6390 32 0 0 0 chr5 16227009 16227041 -183403109 + GC_rich Low_complexity Low_complexity 1 32 0 203 157 61 43 chr5 16227050 16227165 -183402985 + (CGCGG)n Simple_repeat Simple_repeat 5 121 0 * 234 296 0 0 chr5 16227144 16227242 -183402908 + (CCG)n Simple_repeat Simple_repeat 1 98 0 25 51 0 0 chr5 16228022 16228061 -183402089 + GC_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr5 16228349 16228370 -183401780 + (CGG)n Simple_repeat Simple_repeat 2 22 0 387 283 99 81 chr5 16229926 16230209 -183399941 + L3 LINE CR1 1286 1573 -4 279 352 62 25 chr5 16230609 16230771 -183399379 - MIR3 SINE MIR -31 177 10 710 219 113 42 chr5 16233623 16233861 -183396289 + L1ME1 LINE L1 5862 6116 -50 301 257 183 15 chr5 16233923 16234125 -183396025 + L1ME LINE L1 5197 5437 -684 381 75 0 0 chr5 16234813 16234866 -183395284 + (TG)n Simple_repeat Simple_repeat 2 54 0 186 43 0 0 chr5 16235746 16235769 -183394381 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2123 82 0 7 chr5 16235800 16236111 -183394039 - AluSg1 SINE Alu 0 312 4 5871 202 71 44 chr5 16238636 16240172 -183389978 - L1MC4 LINE L1 -76 7966 6390 915 164 0 4 chr5 16240825 16241070 -183389080 + CT-rich Low_complexity Low_complexity 1 244 0 1632 176 17 10 chr5 16241082 16241378 -183388772 - AluJb SINE Alu -14 298 1 2171 96 0 0 chr5 16241635 16241928 -183388222 + AluSc SINE Alu 1 293 -16 248 204 23 102 chr5 16241952 16242040 -183388110 + L1MB7 LINE L1 5996 6076 -108 1667 167 3 22 chr5 16242040 16242358 -183387792 + AluJo SINE Alu 1 312 0 299 272 99 7 chr5 16242409 16242546 -183387604 - MIR SINE MIR -49 213 64 2129 87 20 13 chr5 16243057 16243356 -183386794 - AluSc SINE Alu -8 301 1 1908 124 21 0 chr5 16244406 16244697 -183385453 - AluSx SINE Alu -15 297 1 319 258 96 107 chr5 16245095 16245229 -183384921 - MER5B DNA MER1_type -2 176 43 1352 216 28 0 chr5 16245229 16245511 -183384639 - AluJo SINE Alu -22 290 1 319 258 96 107 chr5 16245511 16245554 -183384596 - MER5B DNA MER1_type -135 43 1 1690 114 51 89 chr5 16246293 16246492 -183383658 - AluSg SINE Alu -6 304 120 2675 87 5 23 chr5 16246492 16246881 -183383269 - L1PA8 LINE L1 -3 6169 5788 1690 114 51 89 chr5 16246881 16246997 -183383153 - AluSg SINE Alu -190 120 1 2622 142 47 2 chr5 16248612 16249055 -183381095 - L1PA16 LINE L1 0 6166 5704 202 229 0 0 chr5 16250098 16250133 -183380017 + MIR SINE MIR 218 252 -10 183 129 0 0 chr5 16252718 16252749 -183377401 + (T)n Simple_repeat Simple_repeat 1 31 0 201 74 0 0 chr5 16253529 16253556 -183376594 + (GGGAGA)n Simple_repeat Simple_repeat 1 27 0 236 255 0 0 chr5 16253956 16254003 -183376147 - L2 LINE L2 -2 3270 3224 1902 125 16 0 chr5 16254020 16254325 -183375825 - AluSx SINE Alu -2 310 1 2383 121 19 16 chr5 16255474 16255847 -183374303 - THE1C LTR MaLR -1 374 1 252 297 0 0 chr5 16256914 16256978 -183373172 + MER46C DNA MER2_type 272 335 -3 3986 171 23 32 chr5 16256988 16257323 -183372827 + L1MB7 LINE L1 5361 5697 -487 1589 171 12 40 chr5 16257323 16257644 -183372506 - AluJo SINE Alu 0 312 1 3986 171 23 32 chr5 16257644 16258016 -183372134 + L1MB7 LINE L1 5697 6063 -121 2156 96 0 0 chr5 16258016 16258296 -183371854 + AluSx SINE Alu 9 288 -24 3986 171 23 32 chr5 16258296 16258407 -183371743 + L1MB7 LINE L1 6063 6173 -11 700 290 34 0 chr5 16259009 16259216 -183370934 - LTR33 LTR ERVL -307 214 1 1952 124 31 0 chr5 16259645 16259936 -183370214 + AluSx SINE Alu 1 300 -12 1596 202 0 0 chr5 16259999 16260301 -183369849 + AluJo SINE Alu 1 302 -10 820 258 50 50 chr5 16260336 16260596 -183369554 + MIR SINE MIR 3 262 0 582 104 0 0 chr5 16263108 16263204 -183366946 + (TGGA)n Simple_repeat Simple_repeat 3 98 0 554 295 109 0 chr5 16263366 16263549 -183366601 + MIR SINE MIR 4 206 -56 2225 69 31 0 chr5 16263892 16264182 -183365968 + AluSc SINE Alu 1 299 -10 2214 87 0 3 chr5 16264184 16264493 -183365657 + AluY SINE Alu 1 308 -3 231 167 0 0 chr5 16265653 16265695 -183364455 + (TG)n Simple_repeat Simple_repeat 2 43 0 885 196 33 0 chr5 16266250 16266403 -183363747 + FRAM SINE Alu 4 161 -5 830 293 111 40 chr5 16266607 16266905 -183363245 - L2 LINE L2 0 3313 2956 2327 112 0 0 chr5 16266905 16267200 -183362950 + AluSx SINE Alu 2 296 -16 830 293 111 40 chr5 16267200 16267401 -183362749 - L2 LINE L2 -357 2956 2771 245 234 0 0 chr5 16268070 16268117 -183362033 + MIR SINE MIR 42 88 -120 180 77 0 0 chr5 16268805 16268831 -183361319 + (TTG)n Simple_repeat Simple_repeat 2 27 0 255 303 11 22 chr5 16269082 16269171 -183360979 + C-rich Low_complexity Low_complexity 5 92 0 22 35 0 0 chr5 16269793 16269822 -183360328 + AT_rich Low_complexity Low_complexity 1 29 0 1646 143 6 99 chr5 16270044 16270358 -183359792 + AluJo SINE Alu 13 297 -15 475 254 25 25 chr5 16271142 16271264 -183358886 + L2 LINE L2 3191 3312 -1 278 198 136 25 chr5 16271484 16271565 -183358585 - MIR SINE MIR -50 212 123 692 252 135 58 chr5 16271787 16272314 -183357836 - MLT1G1 LTR MaLR -38 529 1 2136 118 10 0 chr5 16272762 16273097 -183357053 - AluSc SINE Alu 0 309 6 2912 150 13 42 chr5 16273929 16274475 -183355675 - LTR26B LTR ERV1 0 531 2 1391 223 62 101 chr5 16274611 16275069 -183355081 - MLT2B2 LTR ERVL -2 513 77 2404 70 0 0 chr5 16275069 16275354 -183354796 - AluY SINE Alu -26 285 1 1391 223 62 101 chr5 16275354 16275429 -183354721 - MLT2B2 LTR ERVL -438 77 1 399 318 26 0 chr5 16275490 16275641 -183354509 + MIR SINE MIR 98 252 -10 2275 105 0 0 chr5 16275672 16275979 -183354171 + AluSq SINE Alu 1 307 0 437 229 28 28 chr5 16276368 16276477 -183353673 - L2 LINE L2 -1 3312 3204 288 257 176 20 chr5 16276477 16276625 -183353525 - MARNA DNA Mariner -208 378 208 264 231 44 66 chr5 16276754 16276845 -183353305 - L1ME4a LINE L1 -73 6048 5960 407 303 15 8 chr5 16277041 16277173 -183352977 - MARNA DNA Mariner -393 193 61 1971 157 3 10 chr5 16279249 16279548 -183350602 + AluSx SINE Alu 3 299 -13 1146 194 144 19 chr5 16280038 16280193 -183349957 - AluJo SINE Alu -10 302 168 378 0 0 0 chr5 16280193 16280235 -183349915 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1146 194 144 19 chr5 16280235 16280342 -183349808 - AluJo SINE Alu -144 168 7 582 261 171 0 chr5 16280845 16281044 -183349106 - LTR16A LTR ERVL -193 257 25 2092 130 0 13 chr5 16281324 16281460 -183348690 + AluSx SINE Alu 1 137 -175 2297 108 3 0 chr5 16281460 16281757 -183348393 + AluSq SINE Alu 1 298 -15 2092 130 0 13 chr5 16281757 16281921 -183348229 + AluSx SINE Alu 137 297 -15 451 340 134 28 chr5 16282042 16282648 -183347502 - L2 LINE L2 -641 2673 2004 237 244 12 24 chr5 16283156 16283238 -183346912 - L2 LINE L2 -1442 1872 1792 2353 100 7 0 chr5 16283569 16283869 -183346281 + AluSp SINE Alu 1 302 -11 376 191 99 13 chr5 16283953 16284070 -183346080 - MLT1I LTR MaLR 0 446 277 374 194 61 31 chr5 16284165 16284263 -183345887 - MLT1J2 LTR MaLR -331 119 19 2422 93 0 6 chr5 16284468 16284781 -183345369 - AluSq SINE Alu -1 312 2 212 209 93 0 chr5 16284865 16284908 -183345242 + L2 LINE L2 3257 3303 -10 193 289 87 87 chr5 16285423 16285527 -183344623 - L2 LINE L2 -9 3304 3201 2046 106 40 0 chr5 16285959 16286267 -183343883 - AluSq SINE Alu 0 319 1 561 304 99 10 chr5 16286592 16286793 -183343357 - MIR SINE MIR -40 222 4 546 109 0 0 chr5 16286955 16287047 -183343103 + (TCCA)n Simple_repeat Simple_repeat 3 94 0 819 258 50 50 chr5 16289559 16289819 -183340331 - MIR SINE MIR 0 262 3 1691 209 0 0 chr5 16289854 16290156 -183339994 - AluJo SINE Alu -10 302 1 2114 120 31 0 chr5 16290219 16290510 -183339640 - AluSx SINE Alu -12 300 1 652 290 34 0 chr5 16290939 16291146 -183339004 + LTR33 LTR ERVL 1 214 -307 3732 171 23 35 chr5 16291748 16291859 -183338291 - L1MB7 LINE L1 -11 6173 6062 2281 100 0 0 chr5 16291859 16292139 -183338011 - AluSx SINE Alu -24 288 9 3732 171 23 35 chr5 16292139 16292511 -183337639 - L1MB7 LINE L1 -122 6062 5702 1765 166 12 44 chr5 16292511 16292831 -183337319 + AluJo SINE Alu 1 310 -2 3732 171 23 35 chr5 16292831 16293169 -183336981 - L1MB7 LINE L1 -482 5702 5361 239 297 0 0 chr5 16293179 16293243 -183336907 - MER46C DNA MER2_type -3 335 272 2403 121 19 16 chr5 16294310 16294683 -183335467 + THE1C LTR MaLR 1 374 -1 337 217 0 0 chr5 16294963 16295023 -183335127 - MIR SINE MIR -107 101 42 825 293 111 40 chr5 16295692 16295893 -183334257 + L2 LINE L2 2771 2956 -357 2327 112 0 0 chr5 16295893 16296188 -183333962 - AluSx SINE Alu -16 296 2 825 293 111 40 chr5 16296188 16296486 -183333664 + L2 LINE L2 2956 3313 0 870 199 33 0 chr5 16296690 16296841 -183333309 - FRAM SINE Alu -7 159 4 231 167 0 0 chr5 16297396 16297438 -183332712 + (CA)n Simple_repeat Simple_repeat 2 43 0 181 264 28 69 chr5 16297640 16297712 -183332438 - L2 LINE L2 -209 3063 2995 2332 91 0 3 chr5 16298596 16298905 -183331245 - AluY SINE Alu -3 308 1 2483 60 30 0 chr5 16298913 16299213 -183330937 - AluSc SINE Alu 0 309 1 6146 168 28 54 chr5 16299785 16301216 -183328934 - L1MC3 LINE L1 -2 7783 6390 32 0 0 0 chr5 16302302 16302334 -183327816 + GC_rich Low_complexity Low_complexity 1 32 0 203 157 61 43 chr5 16302343 16302458 -183327692 + (CGCGG)n Simple_repeat Simple_repeat 5 121 0 * 234 296 0 0 chr5 16302437 16302535 -183327615 + (CCG)n Simple_repeat Simple_repeat 1 98 0 25 51 0 0 chr5 16303314 16303353 -183326797 + GC_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr5 16303641 16303662 -183326488 + (CGG)n Simple_repeat Simple_repeat 2 22 0 398 283 99 81 chr5 16305218 16305501 -183324649 + L3 LINE CR1 1286 1573 -4 288 352 62 25 chr5 16305901 16306063 -183324087 - MIR3 SINE MIR -31 177 10 660 235 101 29 chr5 16308916 16309154 -183320996 + L1ME1 LINE L1 5862 6116 -50 225 149 64 0 chr5 16309371 16309418 -183320732 + L1ME LINE L1 5388 5437 -684 363 78 0 0 chr5 16310106 16310157 -183319993 + (TG)n Simple_repeat Simple_repeat 2 52 0 186 43 0 0 chr5 16311037 16311060 -183319090 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2257 82 0 7 chr5 16311091 16311402 -183318748 - AluSg1 SINE Alu 0 312 4 5298 203 77 43 chr5 16313910 16315434 -183314716 - L1MC4 LINE L1 -76 7966 6390 537 185 0 0 chr5 16316087 16316206 -183313944 + CT-rich Low_complexity Low_complexity 2 120 0 954 144 0 0 chr5 16316207 16316387 -183313763 + (TC)n Simple_repeat Simple_repeat 1 180 0 1769 170 17 10 chr5 16316387 16316675 -183313475 - AluJb SINE Alu -22 290 1 2310 96 0 0 chr5 16316929 16317222 -183312928 + AluSc SINE Alu 1 293 -16 256 204 23 102 chr5 16317246 16317334 -183312816 + L1MB7 LINE L1 5996 6076 -108 1844 168 3 16 chr5 16317334 16317650 -183312500 + AluJo SINE Alu 1 312 0 275 279 99 7 chr5 16317701 16317838 -183312312 - MIR SINE MIR -49 213 64 2218 90 20 13 chr5 16318349 16318648 -183311502 - AluSc SINE Alu -8 301 1 2017 124 21 0 chr5 16319697 16319988 -183310162 - AluSx SINE Alu -15 297 1 312 258 96 107 chr5 16320386 16320520 -183309630 - MER5A DNA MER1_type -2 187 43 1424 216 28 0 chr5 16320520 16320802 -183309348 - AluJo SINE Alu -22 290 1 312 258 96 107 chr5 16320802 16320845 -183309305 - MER5A DNA MER1_type -146 43 1 1904 114 53 37 chr5 16321583 16321759 -183308391 - AluSg SINE Alu -6 304 132 197 33 33 0 chr5 16321759 16321789 -183308361 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2939 88 0 13 chr5 16321794 16322171 -183307979 - L1PA8 LINE L1 -13 6159 5788 1904 114 53 37 chr5 16322171 16322287 -183307863 - AluSg SINE Alu -181 129 1 2778 142 47 2 chr5 16323902 16324345 -183305805 - L1PA16 LINE L1 0 6166 5704 196 229 0 0 chr5 16325386 16325421 -183304729 + MIR SINE MIR 218 252 -10 201 74 0 0 chr5 16328791 16328818 -183301332 + (GGGAGA)n Simple_repeat Simple_repeat 1 27 0 195 204 114 0 chr5 16329218 16329262 -183300888 - L2 LINE L2 0 3272 3224 1986 125 16 0 chr5 16329279 16329582 -183300568 - AluSx SINE Alu -4 308 1 2041 97 38 60 chr5 16331970 16332289 -183297861 - AluSx SINE Alu 0 312 1 1106 216 151 26 chr5 16333542 16333927 -183296223 + Charlie4a DNA MER1_type 39 471 -37 476 92 0 40 chr5 16334010 16334086 -183296064 - L1PA8 LINE L1 -6 6166 6094 708 156 0 74 chr5 16334800 16334935 -183295215 + FLAM_C SINE Alu 2 126 -7 2391 65 3 0 chr5 16334967 16335257 -183294893 + AluY SINE Alu 1 291 -20 1372 161 88 19 chr5 16335259 16335520 -183294630 - AluJb SINE Alu -33 279 1 420 320 31 0 chr5 16337279 16337407 -183292743 + MER94 DNA DNA 1 132 -2 22 0 0 0 chr5 16338195 16338217 -183291933 + AT_rich Low_complexity Low_complexity 1 22 0 1246 154 133 87 chr5 16338226 16338512 -183291638 - AluJb SINE Alu -3 299 1 2275 91 0 28 chr5 16338588 16338907 -183291243 + AluSx SINE Alu 3 312 0 1735 164 15 0 chr5 16339333 16339601 -183290549 + AluJo SINE Alu 1 272 -40 409 312 59 15 chr5 16340765 16340967 -183289183 - L3 LINE CR1 -700 877 667 2135 138 0 0 chr5 16345350 16345654 -183284496 - AluSx SINE Alu -8 304 1 549 211 99 14 chr5 16347091 16347233 -183282917 - MIR SINE MIR -108 154 1 1734 151 31 17 chr5 16348505 16348797 -183281353 - AluJo SINE Alu -15 297 2 407 165 12 27 chr5 16350087 16350330 -183279820 + AluJo SINE Alu 1 301 -11 1501 152 0 69 chr5 16351020 16351309 -183278841 - AluJb SINE Alu -4 308 40 3125 224 87 50 chr5 16353557 16354626 -183275524 - L1MC4 LINE L1 0 8042 6935 2366 92 0 7 chr5 16354912 16355217 -183274933 + AluSx SINE Alu 1 303 -9 309 191 174 61 chr5 16355423 16355538 -183274612 - MIR SINE MIR -116 146 19 181 282 14 14 chr5 16356082 16356153 -183273997 + L2 LINE L2 3182 3252 -20 265 246 0 18 chr5 16356278 16356335 -183273815 - LTR67 LTR ERVL -3 554 499 2420 202 58 22 chr5 16356362 16356863 -183273287 - LTR40a LTR ERVL 0 519 1 279 257 134 37 chr5 16356882 16357069 -183273081 - L1ME4a LINE L1 -67 6054 5850 222 243 27 40 chr5 16357167 16357241 -183272909 - MIR3 SINE MIR -1 207 135 1700 124 158 0 chr5 16357729 16357994 -183272156 + AluSx SINE Alu 1 307 -5 341 288 97 45 chr5 16359050 16359338 -183270812 + L2 LINE L2 3011 3313 0 2452 77 3 6 chr5 16359751 16360064 -183270086 + AluSp SINE Alu 1 312 -1 2189 53 15 0 chr5 16360639 16360904 -183269246 + L1PA4 LINE L1 5887 6155 0 1229 67 6 39 chr5 16361017 16361195 -183268955 - MER30 DNA MER1_type -58 172 1 1809 142 14 142 chr5 16361264 16361681 -183268469 + THE1B LTR MaLR 1 364 0 26 50 0 0 chr5 16361692 16361732 -183268418 + AT_rich Low_complexity Low_complexity 1 40 0 269 232 53 53 chr5 16361742 16361837 -183268313 + MLT1H LTR MaLR 454 548 -1 443 307 98 16 chr5 16361843 16362087 -183268063 + MARNA DNA Mariner 228 491 -95 606 212 35 24 chr5 16363533 16363703 -183266447 + MIR SINE MIR 86 257 -5 2037 134 3 7 chr5 16364496 16364795 -183265355 - AluSx SINE Alu -14 298 1 1552 189 10 7 chr5 16364820 16365122 -183265028 - AluJb SINE Alu -9 303 1 585 232 138 6 chr5 16365728 16365909 -183264241 + L1ME1 LINE L1 4992 5196 -950 782 147 17 0 chr5 16365911 16366027 -183264123 + FLAM_C SINE Alu 3 120 -23 418 129 12 59 chr5 16366027 16366197 -183263953 + (CA)n Simple_repeat Simple_repeat 1 162 0 335 122 10 31 chr5 16366225 16366323 -183263827 + (CA)n Simple_repeat Simple_repeat 2 97 0 866 178 0 33 chr5 16366325 16366477 -183263673 + FRAM SINE Alu 1 146 -30 180 0 0 0 chr5 16366477 16366497 -183263653 + (GA)n Simple_repeat Simple_repeat 2 21 0 3295 194 57 16 chr5 16366497 16367324 -183262826 + L1ME1 LINE L1 5195 6044 -122 1126 214 148 28 chr5 16367325 16367684 -183262466 + MER57B LTR ERV1 1 402 -32 262 221 151 0 chr5 16367852 16367938 -183262212 - MIR SINE MIR -92 170 72 180 77 0 0 chr5 16369368 16369394 -183260756 + (TTG)n Simple_repeat Simple_repeat 2 27 0 255 303 11 22 chr5 16369645 16369734 -183260416 + C-rich Low_complexity Low_complexity 5 92 0 21 36 0 0 chr5 16370356 16370384 -183259766 + AT_rich Low_complexity Low_complexity 1 28 0 1598 156 6 95 chr5 16370594 16370920 -183259230 + AluJo SINE Alu 1 297 -15 213 193 18 35 chr5 16371970 16372027 -183258123 + CT-rich Low_complexity Low_complexity 5 60 0 259 192 10 40 chr5 16372057 16372156 -183257994 + (TA)n Simple_repeat Simple_repeat 2 97 0 246 333 56 0 chr5 16374287 16374377 -183255773 + MIR3 SINE MIR 108 202 -6 788 262 104 9 chr5 16374671 16374892 -183255258 + MIR SINE MIR 12 253 -9 305 247 75 0 chr5 16375635 16375728 -183254422 - MIR SINE MIR -156 106 7 260 290 97 11 chr5 16378410 16378503 -183251647 + MER5A DNA MER1_type 26 126 -63 269 212 68 76 chr5 16378597 16378715 -183251435 - MER112 DNA MER1_type -65 195 79 210 143 0 0 chr5 16378787 16378822 -183251328 + (TTC)n Simple_repeat Simple_repeat 2 36 0 14371 116 50 25 chr5 16378823 16381111 -183249039 + Tigger1 DNA MER2_type 55 2399 -19 334 203 0 0 chr5 16381114 16381178 -183248972 - MER112 DNA MER1_type -193 67 4 246 308 128 15 chr5 16381326 16381459 -183248691 + MER5A DNA MER1_type 40 187 -2 * 330 286 34 25 chr5 16381354 16381473 -183248677 - MER5A DNA MER1_type -67 122 3 187 238 0 0 chr5 16381944 16381986 -183248164 + MIR3 SINE MIR 162 203 -5 25 0 0 0 chr5 16382930 16382955 -183247195 + AT_rich Low_complexity Low_complexity 1 25 0 36 23 0 0 chr5 16383048 16383091 -183247059 + AT_rich Low_complexity Low_complexity 1 43 0 204 236 67 34 chr5 16383688 16383777 -183246373 + MIR3 SINE MIR 81 172 -36 1436 185 114 81 chr5 16384077 16384651 -183245499 - MLT1E1 LTR MaLR -13 641 2 1021 78 0 0 chr5 16387553 16387681 -183242469 + AluSg/x SINE Alu 179 306 -6 24 32 0 0 chr5 16387873 16387904 -183242246 + AT_rich Low_complexity Low_complexity 1 31 0 482 222 141 65 chr5 16388015 16388200 -183241950 - MER58A DNA MER1_type -17 207 9 607 256 43 6 chr5 16388882 16389046 -183241104 - MER20B DNA MER1_type -326 457 288 318 26 0 0 chr5 16389123 16389162 -183240988 + (TG)n Simple_repeat Simple_repeat 2 40 0 260 156 0 0 chr5 16389199 16389244 -183240906 - MER20B DNA MER1_type -696 87 43 254 247 34 45 chr5 16389716 16389805 -183240345 + MIR SINE MIR 139 226 -36 383 237 86 20 chr5 16390810 16390962 -183239188 - MIR SINE MIR -36 226 65 237 231 333 8 chr5 16391266 16391383 -183238767 + L2 LINE L2 3159 3313 0 1779 163 0 30 chr5 16391989 16392290 -183237860 + AluJb SINE Alu 5 296 -16 603 150 42 58 chr5 16392420 16392540 -183237610 - AluJo SINE Alu -108 204 87 1455 186 39 39 chr5 16392566 16392878 -183237272 - AluJo SINE Alu 0 312 1 28 86 0 0 chr5 16393694 16393764 -183236386 + AT_rich Low_complexity Low_complexity 1 70 0 193 371 63 25 chr5 16394154 16394313 -183235837 + MIR SINE MIR 34 198 -64 24 0 0 0 chr5 16394596 16394620 -183235530 + AT_rich Low_complexity Low_complexity 1 24 0 842 143 0 16 chr5 16394620 16394746 -183235404 - FLAM_C SINE Alu -5 128 5 835 200 126 33 chr5 16395480 16395695 -183234455 - L1MB8 LINE L1 -5 6173 5939 1214 176 8 64 chr5 16395885 16396135 -183234015 - MER46A DNA MER2_type 0 236 1 261 295 50 58 chr5 16397598 16397737 -183232413 + MIR SINE MIR 36 173 -89 277 289 134 43 chr5 16398303 16398490 -183231660 - MIR SINE MIR -48 214 11 22 0 0 0 chr5 16400433 16400455 -183229695 + AT_rich Low_complexity Low_complexity 1 22 0 731 283 68 0 chr5 16400776 16400995 -183229155 - MIR SINE MIR -22 240 7 1038 186 10 29 chr5 16401372 16401576 -183228574 - AluJo SINE Alu -26 286 87 2357 96 0 0 chr5 16406569 16406870 -183223280 + AluSg SINE Alu 1 301 -9 203 323 62 8 chr5 16407530 16407660 -183222490 - MIR SINE MIR -30 232 96 291 274 69 10 chr5 16407740 16407842 -183222308 - L2 LINE L2 -10 3262 3155 304 303 138 0 chr5 16409630 16409739 -183220411 - MIR SINE MIR -49 213 90 1469 152 65 14 chr5 16412149 16412426 -183217724 - AluJb SINE Alu -21 291 1 1514 229 98 10 chr5 16412474 16412872 -183217278 + Charlie1b DNA MER1_type 1 433 -90 291 200 46 15 chr5 16412902 16412967 -183217183 + Charlie1b DNA MER1_type 411 477 -46 1556 81 61 0 chr5 16412984 16413182 -183216968 - AluSg/x SINE Alu -29 281 72 538 262 74 37 chr5 16414121 16414322 -183215828 + L1ME3 LINE L1 5696 5909 -261 2187 143 37 8 chr5 16414322 16414673 -183215477 - MER46B DNA MER2_type 0 236 1 538 262 74 37 chr5 16414673 16414715 -183215435 + L1ME3 LINE L1 5909 5948 -222 2278 163 60 8 chr5 16414792 16415192 -183214958 - MSTB LTR MaLR -5 421 1 259 250 56 69 chr5 16415193 16415337 -183214813 + L1ME3 LINE L1 5955 6096 -66 250 306 20 10 chr5 16416767 16416865 -183213285 - MIR SINE MIR -119 143 45 212 260 0 0 chr5 16422514 16422564 -183207586 + (TATG)n Simple_repeat Simple_repeat 3 52 0 21 57 0 0 chr5 16422938 16422973 -183207177 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 16423297 16423325 -183206825 + AT_rich Low_complexity Low_complexity 1 28 0 21 82 0 0 chr5 16424193 16424242 -183205908 + AT_rich Low_complexity Low_complexity 1 49 0 192 135 0 0 chr5 16424802 16424839 -183205311 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 1522 158 19 15 chr5 16424840 16425106 -183205044 - AluSx SINE Alu -5 307 41 250 303 53 0 chr5 16425130 16425206 -183204944 - L2 LINE L2 -11 3302 3223 478 223 10 114 chr5 16428108 16428301 -183201849 - L1ME LINE L1 -5460 610 438 299 239 145 8 chr5 16428346 16428463 -183201687 - L1ME LINE L1 -5853 217 85 813 176 149 0 chr5 16431730 16431918 -183198232 - L1MB7 LINE L1 -16 6168 5953 721 176 171 9 chr5 16432267 16432475 -183197675 + MLT1A1 LTR MaLR 1 249 -125 2512 241 143 51 chr5 16432636 16433941 -183196209 - L1MC5 LINE L1 -36 7925 6512 268 262 70 66 chr5 16434345 16434589 -183195561 - L1MC4a LINE L1 -1778 6030 5786 267 157 0 0 chr5 16434643 16434694 -183195456 + (TA)n Simple_repeat Simple_repeat 2 52 0 235 125 54 0 chr5 16434699 16434755 -183195395 + L1MCa LINE L1 2006 2064 -4362 219 186 0 0 chr5 16434756 16434799 -183195351 + (TA)n Simple_repeat Simple_repeat 1 43 0 416 262 35 28 chr5 16435919 16436060 -183194090 - L2 LINE L2 -73 3240 3099 189 0 0 0 chr5 16436115 16436136 -183194014 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 238 314 85 8 chr5 16437755 16437873 -183192277 + MIR SINE MIR 100 226 -36 2032 133 151 34 chr5 16439935 16440318 -183189832 - MSTA LTR MaLR 0 428 1 612 217 76 14 chr5 16441345 16441552 -183188598 - L1MD3 LINE L1 -2 7993 7720 271 307 109 0 chr5 16442182 16442319 -183187831 + MIR SINE MIR 84 235 -27 198 0 0 0 chr5 16442546 16442568 -183187582 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 285 225 167 51 chr5 16444862 16445000 -183185150 - Charlie1 DNA MER1_type -1189 1572 1419 2480 58 3 0 chr5 16447169 16447461 -183182689 + AluY SINE Alu 1 293 -18 1105 187 53 78 chr5 16447741 16447887 -183182263 + AluJo SINE Alu 1 138 -174 2209 103 10 0 chr5 16447887 16448187 -183181963 + AluSq SINE Alu 1 303 -10 1105 187 53 78 chr5 16448187 16448324 -183181826 + AluJo SINE Alu 138 277 -35 24 0 0 29 chr5 16448332 16448347 -183181803 + AT_rich Low_complexity Low_complexity 1 15 -19 2117 120 3 7 chr5 16448347 16448639 -183181511 + AluSx SINE Alu 1 291 -21 24 0 0 29 chr5 16448639 16448658 -183181492 + AT_rich Low_complexity Low_complexity 15 34 0 1977 181 36 0 chr5 16449902 16450238 -183179912 - MER7A DNA MER2_type 0 346 1 184 274 39 0 chr5 16450437 16450488 -183179662 - L2 LINE L2 -15 3298 3246 21 36 0 0 chr5 16451322 16451350 -183178800 + AT_rich Low_complexity Low_complexity 1 28 0 189 307 46 46 chr5 16451883 16452101 -183178049 - L2 LINE L2 -221 3051 2834 2857 107 0 3 chr5 16452430 16452795 -183177355 + THE1B LTR MaLR 1 364 0 205 200 200 63 chr5 16452840 16452935 -183177215 + L2 LINE L2 3165 3272 0 605 261 113 15 chr5 16454200 16454403 -183175747 - MIR SINE MIR -12 250 28 659 287 143 0 chr5 16456935 16457158 -183172992 - MIR SINE MIR -2 260 6 235 307 160 20 chr5 16458751 16458901 -183171249 - MIR3 SINE MIR -21 187 17 2397 73 0 0 chr5 16459779 16460065 -183170085 - AluSx SINE Alu -12 300 15 2291 272 123 26 chr5 16461190 16462314 -183167836 - L1MC4 LINE L1 0 7808 6613 750 200 7 5 chr5 16462318 16462887 -183167263 + (TCCA)n Simple_repeat Simple_repeat 1 570 0 349 251 6 12 chr5 16462961 16463124 -183167026 + (CCCA)n Simple_repeat Simple_repeat 2 163 0 599 244 80 24 chr5 16463124 16463337 -183166813 - L1MC4 LINE L1 -1355 6687 6463 199 273 0 0 chr5 16463751 16463795 -183166355 - L2 LINE L2 -22 3250 3207 319 269 9 19 chr5 16463828 16463936 -183166214 + T-rich Low_complexity Low_complexity 3 109 0 2141 116 0 10 chr5 16464727 16465021 -183165129 - AluSx SINE Alu -21 291 1 22 0 0 0 chr5 16466622 16466644 -183163506 + AT_rich Low_complexity Low_complexity 1 22 0 299 218 85 128 chr5 16467760 16467948 -183162202 - MER3 DNA MER1_type 0 209 30 277 274 66 28 chr5 16471804 16471910 -183158240 + MER5A DNA MER1_type 23 132 -57 657 271 92 75 chr5 16474440 16474894 -183155256 - MLT1J LTR MaLR -49 462 1 1194 295 45 22 chr5 16475018 16475526 -183154624 - MER20B DNA MER1_type 0 783 264 2396 67 0 10 chr5 16476144 16476443 -183153707 - AluSc SINE Alu -13 296 1 22 35 0 0 chr5 16477002 16477031 -183153119 + AT_rich Low_complexity Low_complexity 1 29 0 232 250 15 15 chr5 16477249 16477317 -183152833 + (TG)n Simple_repeat Simple_repeat 1 68 0 2154 100 50 13 chr5 16478602 16478737 -183151413 + AluSx SINE Alu 1 130 -182 2256 107 0 3 chr5 16478737 16479037 -183151113 + AluSx SINE Alu 1 299 -13 2154 100 50 13 chr5 16479037 16479202 -183150948 + AluSx SINE Alu 130 312 0 1208 131 0 0 chr5 16479202 16479370 -183150780 + AluSg/x SINE Alu 132 299 -13 1510 214 14 103 chr5 16540267 16540860 -183089290 + L1M4 LINE L1 2314 2853 -3293 649 178 78 0 chr5 16543669 16543798 -183086352 - FLAM_A SINE Alu -3 139 1 283 308 22 22 chr5 16543851 16543942 -183086208 + L2 LINE L2 3198 3288 -25 998 192 9 57 chr5 16544136 16544365 -183085785 - MER20B DNA MER1_type 0 219 2 1228 182 40 121 chr5 16544632 16545028 -183085122 + MLT1A1 LTR MaLR 1 364 -1 1301 67 0 0 chr5 16546499 16546663 -183083487 + L1PA4 LINE L1 5989 6152 -3 5148 94 42 7 chr5 16546666 16547398 -183082752 + L1PA7 LINE L1 5384 6141 -13 207 0 0 0 chr5 16547960 16547983 -183082167 + (TA)n Simple_repeat Simple_repeat 1 23 0 393 212 25 76 chr5 16549613 16549731 -183080419 - MIR3 SINE MIR -31 177 66 2009 121 10 0 chr5 16552994 16553291 -183076859 - AluSx SINE Alu -12 300 1 242 306 22 72 chr5 16553292 16553472 -183076678 + MIR3 SINE MIR 36 206 -2 2065 157 48 45 chr5 16554754 16555195 -183074955 - MER65A LTR ERV1 0 445 4 708 218 0 0 chr5 16555665 16555798 -183074352 + FLAM_A SINE Alu 1 133 0 280 250 33 94 chr5 16556097 16556277 -183073873 - L2 LINE L2 0 3313 3145 2583 178 36 4 chr5 16557719 16558214 -183071936 + L1MB5 LINE L1 5656 6166 -8 545 132 28 0 chr5 16558231 16558337 -183071813 + L1MA8 LINE L1 6183 6291 0 474 242 11 0 chr5 16558396 16558491 -183071659 - MIR SINE MIR -86 176 81 426 286 140 12 chr5 16558497 16558668 -183071482 - MIR3 SINE MIR 0 208 16 253 351 36 56 chr5 16559569 16559820 -183070330 - L2 LINE L2 -189 3083 2838 2298 81 3 0 chr5 16560104 16560411 -183069739 + AluSx SINE Alu 1 308 -4 2524 159 28 30 chr5 16561843 16562316 -183067834 + MER70A LTR ERVL 1 472 0 3077 191 46 3 chr5 16562316 16563389 -183066761 + MER70A-int LTR ERVL 1 1191 -3832 1864 186 40 40 chr5 16563410 16563835 -183066315 + MER70A-int LTR ERVL 2387 2811 -2212 * 5461 164 31 41 chr5 16563820 16564552 -183065598 + MER70A-int LTR ERVL 2947 3685 -1338 1996 174 88 8 chr5 16564552 16564948 -183065202 + MSTA LTR MaLR 1 428 0 5461 164 31 41 chr5 16564948 16565150 -183065000 + MER70A-int LTR ERVL 3685 3888 -1135 2173 119 3 0 chr5 16565150 16565461 -183064689 - AluSx SINE Alu 0 312 1 5461 164 31 41 chr5 16565461 16565917 -183064233 + MER70A-int LTR ERVL 3888 4347 -676 963 51 7 15 chr5 16565917 16566054 -183064096 - L1PA4 LINE L1 0 6155 6020 5461 164 31 41 chr5 16566054 16566525 -183063625 + MER70A-int LTR ERVL 4347 4882 -141 2208 209 15 0 chr5 16566525 16566937 -183063213 + MER70A LTR ERVL 55 472 0 2060 92 3 38 chr5 16567383 16567699 -183062451 + AluSp SINE Alu 3 307 -6 217 253 76 38 chr5 16568114 16568193 -183061957 + L2 LINE L2 2412 2493 -821 1053 137 22 22 chr5 16570624 16570806 -183059344 + AluJb SINE Alu 116 297 -15 2541 65 0 10 chr5 16571667 16571976 -183058174 + AluY SINE Alu 1 306 -5 249 400 39 0 chr5 16572962 16573092 -183057058 + L2 LINE L2 3136 3270 -2 300 156 26 91 chr5 16574448 16574525 -183055625 - Tigger5 DNA MER2_type 0 2323 2252 284 222 19 0 chr5 16574496 16574550 -183055600 - Tigger5 DNA MER2_type -2268 55 1 * 3404 192 30 66 chr5 16574604 16575477 -183054673 - L1MD2 LINE L1 -14 6345 5505 195 212 136 45 chr5 16576003 16576069 -183054081 + MIR SINE MIR 80 151 -111 1933 119 78 0 chr5 16577126 16577395 -183052755 - AluSx SINE Alu -22 290 1 210 237 34 51 chr5 16578269 16578328 -183051822 + L3 LINE CR1 445 502 -1075 205 387 6 12 chr5 16580031 16580199 -183049951 + (TATG)n Simple_repeat Simple_repeat 4 170 0 355 331 0 22 chr5 16580213 16580394 -183049756 + (TG)n Simple_repeat Simple_repeat 2 178 0 368 333 6 17 chr5 16580492 16580672 -183049478 + (TG)n Simple_repeat Simple_repeat 1 178 0 419 311 0 22 chr5 16580698 16580881 -183049269 + (TG)n Simple_repeat Simple_repeat 1 179 0 2413 114 11 3 chr5 16581276 16581636 -183048514 - L1PA15 LINE L1 -4 6161 5799 1916 153 0 54 chr5 16582375 16582708 -183047442 - MER1B DNA MER1_type -24 315 1 2058 103 45 7 chr5 16584826 16585118 -183045032 - AluSx SINE Alu -9 303 1 506 310 51 0 chr5 16585121 16585279 -183044871 - MIR SINE MIR -86 176 11 226 294 87 76 chr5 16586974 16587158 -183042992 - MIR SINE MIR -71 191 6 245 298 12 12 chr5 16587432 16587516 -183042634 + MIR3 SINE MIR 92 175 -33 2560 234 69 21 chr5 16587890 16588674 -183041476 + L1ME2 LINE L1 5356 6332 -2 204 150 50 0 chr5 16590058 16590098 -183040052 + CT-rich Low_complexity Low_complexity 5 46 0 21 0 0 0 chr5 16590150 16590171 -183039979 + AT_rich Low_complexity Low_complexity 1 21 0 200 267 6 19 chr5 16591485 16591646 -183038504 + CT-rich Low_complexity Low_complexity 1 159 0 28 29 0 0 chr5 16592772 16592807 -183037343 + AT_rich Low_complexity Low_complexity 1 35 0 2050 122 14 0 chr5 16593391 16593670 -183036480 + AluSq SINE Alu 1 283 -30 2177 121 7 3 chr5 16594557 16594855 -183035295 - AluSx SINE Alu -13 299 1 234 182 0 0 chr5 16595051 16595095 -183035055 - L1MC3 LINE L1 -857 6928 6885 243 254 0 0 chr5 16595119 16595174 -183034976 - L1MB7 LINE L1 -10 6174 6120 401 238 67 72 chr5 16597367 16597590 -183032560 - MLT1J LTR MaLR -193 318 97 922 143 0 43 chr5 16601662 16601823 -183028327 - FRAM SINE Alu -1 175 22 1573 162 96 35 chr5 16602490 16602835 -183027315 + MER47A DNA MER2_type 1 366 0 623 231 130 47 chr5 16603016 16603197 -183026953 - L1MC5 LINE L1 -171 7790 7625 1952 161 0 3 chr5 16603197 16603496 -183026654 - AluJo SINE Alu -14 298 1 623 231 130 47 chr5 16603496 16603760 -183026390 - L1MC5 LINE L1 -336 7625 7308 207 0 0 0 chr5 16603808 16603831 -183026319 + (GA)n Simple_repeat Simple_repeat 1 23 0 854 215 125 81 chr5 16604009 16604418 -183025732 - L1MC5 LINE L1 -728 7233 6807 2014 148 16 47 chr5 16604420 16604806 -183025344 - THE1C LTR MaLR -1 374 1 672 268 0 0 chr5 16604887 16605044 -183025106 + L1MC5 LINE L1 6636 6792 -1169 287 267 38 61 chr5 16605262 16605393 -183024757 + MER58B DNA MER1_type 197 324 -17 252 259 106 41 chr5 16605388 16605617 -183024533 - MLT1F1 LTR MaLR -91 502 188 * 196 175 105 18 chr5 16606484 16606541 -183023609 - MIR SINE MIR -129 133 72 362 269 115 54 chr5 16608049 16608328 -183021822 - L1MC5 LINE L1 -1878 5930 5635 2273 112 0 13 chr5 16608791 16609104 -183021046 - AluSx SINE Alu -3 309 1 2366 116 0 0 chr5 16610103 16610414 -183019736 - AluSq SINE Alu -2 311 1 343 252 0 41 chr5 16611806 16611929 -183018221 + C-rich Low_complexity Low_complexity 3 120 0 1961 62 39 0 chr5 16612177 16612434 -183017716 + L1P3 LINE L1 5538 5804 -350 395 276 74 28 chr5 16613586 16613803 -183016347 - MARNA DNA Mariner -182 404 178 245 241 0 37 chr5 16614322 16614376 -183015774 - FAM SINE Alu -17 158 107 254 174 0 45 chr5 16614420 16614476 -183015674 - Alu SINE Alu -19 283 245 183 42 0 0 chr5 16614497 16614521 -183015629 + (TG)n Simple_repeat Simple_repeat 2 25 0 520 217 38 0 chr5 16614523 16614629 -183015521 - FRAM SINE Alu -30 146 37 678 137 29 79 chr5 16614634 16614773 -183015377 + AluJo SINE Alu 41 172 -140 260 361 17 0 chr5 16615656 16615775 -183014375 + MER5A DNA MER1_type 69 189 0 480 260 96 14 chr5 16616449 16616668 -183013482 + L1MC4 LINE L1 5270 5506 -2302 309 266 82 49 chr5 16616946 16617130 -183013020 + L1MC4 LINE L1 5781 5970 -1838 353 286 122 31 chr5 16617540 16617834 -183012316 - L2 LINE L2 -82 3231 2911 629 177 194 16 chr5 16619766 16619952 -183010198 + MER20 DNA MER1_type 1 219 0 6954 51 15 12 chr5 16623669 16624318 -183005832 + L1PA7 LINE L1 5171 5822 -332 2447 78 3 7 chr5 16624318 16624625 -183005525 + AluY SINE Alu 1 306 -5 6954 51 15 12 chr5 16624625 16624939 -183005211 + L1PA7 LINE L1 5822 6134 -20 215 231 48 115 chr5 16625121 16625225 -183004925 - L2 LINE L2 -12 3260 3164 23 0 0 0 chr5 16626396 16626419 -183003731 + AT_rich Low_complexity Low_complexity 1 23 0 2319 60 0 3 chr5 16627339 16627621 -183002529 + AluY SINE Alu 23 303 -8 26 50 0 0 chr5 16627973 16628013 -183002137 + AT_rich Low_complexity Low_complexity 1 40 0 2375 112 0 0 chr5 16628013 16628325 -183001825 - AluSx SINE Alu 0 312 1 193 261 109 22 chr5 16629030 16629122 -183001028 + L2 LINE L2 3145 3244 -28 373 309 148 27 chr5 16629328 16629694 -183000456 - MLT1J LTR MaLR -15 496 87 339 282 28 7 chr5 16634027 16634169 -182995981 + (TGG)n Simple_repeat Simple_repeat 1 145 0 1090 143 22 22 chr5 16634374 16634556 -182995594 - AluJb SINE Alu -15 297 116 193 373 0 0 chr5 16635362 16635437 -182994713 - L2 LINE L2 -562 2752 2678 21 0 0 0 chr5 16636246 16636267 -182993883 + AT_rich Low_complexity Low_complexity 1 21 0 1842 159 6 25 chr5 16637628 16637942 -182992208 - AluJo SINE Alu -4 308 1 592 261 5 59 chr5 16638396 16638582 -182991568 + L1MC4 LINE L1 6457 6633 -1409 180 0 0 0 chr5 16638582 16638602 -182991548 + (CA)n Simple_repeat Simple_repeat 2 21 0 592 261 5 59 chr5 16638602 16638618 -182991532 + L1MC4 LINE L1 6633 6648 -1394 363 222 94 17 chr5 16639453 16639570 -182990580 - MIR SINE MIR -80 182 57 291 280 200 7 chr5 16640757 16640907 -182989243 - MIR SINE MIR -21 241 63 265 293 28 0 chr5 16642188 16642283 -182987867 - MIR SINE MIR -63 145 76 309 215 77 0 chr5 16643573 16643638 -182986512 + Tigger2 DNA MER2_type 2 71 -2647 245 224 103 0 chr5 16643642 16643700 -182986450 - MER2 DNA MER2_type 0 345 282 * 352 246 0 0 chr5 16643677 16643742 -182986408 - MER8 DNA MER2_type -62 177 113 1586 182 75 3 chr5 16644004 16644339 -182985811 - MLT1A1 LTR MaLR -2 363 5 259 282 0 0 chr5 16644826 16644904 -182985246 + MIR SINE MIR 78 155 -107 25 0 0 0 chr5 16645942 16645967 -182984183 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 16646131 16646153 -182983997 + AT_rich Low_complexity Low_complexity 1 22 0 2351 106 3 0 chr5 16646159 16646471 -182983679 + AluSq SINE Alu 1 313 0 23 0 0 0 chr5 16646675 16646698 -182983452 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr5 16647946 16647969 -182982181 + (TC)n Simple_repeat Simple_repeat 2 24 0 2294 145 51 12 chr5 16647969 16648382 -182981768 + MSTB1 LTR MaLR 2 430 -2 638 260 92 36 chr5 16648624 16648874 -182981276 + MER46C DNA MER2_type 36 299 -39 182 222 185 0 chr5 16648909 16648963 -182981187 - MIR SINE MIR -109 153 90 184 345 0 0 chr5 16650309 16650364 -182979786 + MIR SINE MIR 97 151 -57 2743 107 0 0 chr5 16651572 16651936 -182978214 - THE1B LTR MaLR 0 364 1 21 36 0 0 chr5 16653014 16653042 -182977108 + AT_rich Low_complexity Low_complexity 1 28 0 1291 185 3 83 chr5 16655151 16655476 -182974674 - AluSx SINE Alu -13 299 1 2273 107 0 3 chr5 16655478 16655778 -182974372 - AluSx SINE Alu -13 299 1 1016 105 8 0 chr5 16655780 16655913 -182974237 - AluSq/x SINE Alu -179 134 1 232 250 15 15 chr5 16657198 16657266 -182972884 + (CA)n Simple_repeat Simple_repeat 1 68 0 22 35 0 0 chr5 16657484 16657513 -182972637 + AT_rich Low_complexity Low_complexity 1 29 0 2444 63 0 10 chr5 16658072 16658371 -182971779 + AluSc SINE Alu 1 296 -13 1082 296 54 22 chr5 16658989 16659493 -182970657 + MER20B DNA MER1_type 264 783 0 639 283 91 71 chr5 16659617 16660070 -182970080 + MLT1J LTR MaLR 1 462 -49 2159 116 0 10 chr5 16662637 16662931 -182967219 + AluSx SINE Alu 1 291 -21 319 269 9 19 chr5 16663723 16663831 -182966319 + A-rich Low_complexity Low_complexity 3 109 0 183 273 0 0 chr5 16663864 16663908 -182966242 + L2 LINE L2 3207 3250 -22 588 249 80 24 chr5 16664322 16664535 -182965615 + L1MC4 LINE L1 6463 6687 -1355 349 251 6 12 chr5 16664535 16664698 -182965452 + (TGGG)n Simple_repeat Simple_repeat 2 163 0 820 222 26 6 chr5 16664701 16665019 -182965131 + (TGGA)n Simple_repeat Simple_repeat 1 324 0 601 198 6 16 chr5 16665041 16665223 -182964927 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 697 278 48 39 chr5 16665344 16665789 -182964361 + L1MC4 LINE L1 7386 7808 0 1856 184 36 0 chr5 16666756 16667092 -182963058 - MER7A DNA MER2_type 0 346 1 305 247 236 6 chr5 16667621 16667799 -182962351 + MIR SINE MIR 12 230 -32 250 264 66 28 chr5 16668575 16668681 -182961469 - MER5A DNA MER1_type -57 132 23 292 218 85 128 chr5 16672393 16672581 -182957569 + MER3 DNA MER1_type 30 209 0 22 0 0 0 chr5 16673697 16673719 -182956431 + AT_rich Low_complexity Low_complexity 1 22 0 542 261 113 15 chr5 16675298 16675501 -182954649 - MIR SINE MIR -12 250 28 608 283 143 0 chr5 16678034 16678257 -182951893 - MIR SINE MIR -2 260 6 1402 130 4 48 chr5 16678673 16678903 -182951247 - AluJo SINE Alu -9 303 84 190 312 167 22 chr5 16680047 16680185 -182949965 - MIR3 SINE MIR -34 174 17 2480 74 0 0 chr5 16681063 16681359 -182948791 - AluSx SINE Alu -2 310 15 24 0 0 29 chr5 16683003 16683022 -182947128 + AT_rich Low_complexity Low_complexity 1 20 -14 2167 116 3 7 chr5 16683022 16683314 -182946836 - AluSx SINE Alu -21 291 1 24 0 0 29 chr5 16683314 16683329 -182946821 + AT_rich Low_complexity Low_complexity 20 34 0 1117 187 53 78 chr5 16683337 16683474 -182946676 - AluJo SINE Alu -35 277 149 2227 103 10 0 chr5 16683474 16683774 -182946376 - AluSq SINE Alu -10 303 1 1117 187 53 78 chr5 16683774 16683920 -182946230 - AluJo SINE Alu -163 149 1 2506 61 3 0 chr5 16684200 16684493 -182945657 - AluY SINE Alu -17 294 1 287 232 167 51 chr5 16686662 16686800 -182943350 + Charlie1 DNA MER1_type 1419 1572 -1189 198 0 0 0 chr5 16689094 16689116 -182941034 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 236 307 109 0 chr5 16689343 16689480 -182940670 - MIR SINE MIR -27 235 84 600 213 89 6 chr5 16690111 16690280 -182939870 + L1MC5 LINE L1 7720 7902 -59 1883 135 151 39 chr5 16691345 16691730 -182938420 + MSTA LTR MaLR 1 428 0 208 314 85 8 chr5 16693789 16693907 -182936243 - MIR SINE MIR -36 226 100 189 0 0 0 chr5 16695529 16695550 -182934600 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 397 242 40 16 chr5 16695622 16695746 -182934404 + L2 LINE L2 3114 3240 -73 219 186 0 0 chr5 16696866 16696909 -182933241 + (TA)n Simple_repeat Simple_repeat 2 44 0 226 125 54 0 chr5 16696910 16696966 -182933184 - L1MCa LINE L1 -4362 2064 2006 251 140 20 0 chr5 16696971 16697021 -182933129 + (TA)n Simple_repeat Simple_repeat 1 51 0 253 288 27 18 chr5 16697075 16697186 -182932964 + L1MB7 LINE L1 5786 5897 -1911 2449 240 143 51 chr5 16697724 16699029 -182931121 + L1MC5 LINE L1 6512 7925 -36 713 182 171 9 chr5 16699190 16699398 -182930752 - MLT1A1 LTR MaLR -125 249 1 811 176 149 0 chr5 16699747 16699935 -182930215 + L1MB7 LINE L1 5953 6168 -16 300 239 145 8 chr5 16703203 16703320 -182926830 + L1ME LINE L1 85 217 -5853 476 223 10 114 chr5 16703365 16703558 -182926592 + L1ME LINE L1 438 610 -5460 227 303 53 0 chr5 16706529 16706605 -182923545 + L2 LINE L2 3223 3302 -11 1540 158 19 15 chr5 16706629 16706895 -182923255 + AluSx SINE Alu 41 307 -5 192 135 0 0 chr5 16706896 16706933 -182923217 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 21 82 0 0 chr5 16707493 16707542 -182922608 + AT_rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr5 16708410 16708438 -182921712 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 16708762 16708797 -182921353 + AT_rich Low_complexity Low_complexity 1 35 0 212 260 0 0 chr5 16709171 16709221 -182920929 + (CATA)n Simple_repeat Simple_repeat 3 52 0 227 306 20 10 chr5 16714863 16714961 -182915189 + MIR SINE MIR 45 143 -119 240 257 56 69 chr5 16716391 16716535 -182913615 - L1ME3 LINE L1 -66 6096 5955 2286 163 60 8 chr5 16716536 16716936 -182913214 + MSTB LTR MaLR 1 421 -5 238 150 0 0 chr5 16717013 16717053 -182913097 - L1ME3 LINE L1 -222 5948 5909 2106 137 38 9 chr5 16717055 16717399 -182912751 + MER46B DNA MER2_type 1 229 -7 399 279 23 35 chr5 16717435 16717607 -182912543 - L1ME3 LINE L1 -305 5865 5696 202 231 0 19 chr5 16722219 16722271 -182907879 + MIR SINE MIR 94 144 -118 487 282 79 0 chr5 16722388 16722590 -182907560 - MIR SINE MIR -10 252 35 337 188 82 0 chr5 16723372 16723457 -182906693 - MER69A DNA AcHobo -54 123 32 442 233 137 9 chr5 16725257 16725476 -182904674 + MLT1H LTR MaLR 73 319 -230 292 301 70 6 chr5 16726015 16726171 -182903979 - MER105 DNA DNA -37 167 2 904 237 68 23 chr5 16726495 16726803 -182903347 + MER33 DNA MER1_type 3 324 0 22 0 0 0 chr5 16727788 16727810 -182902340 + AT_rich Low_complexity Low_complexity 1 22 0 235 200 0 0 chr5 16727942 16727992 -182902158 - L1ME3A LINE L1 -8 6162 6113 1745 145 23 13 chr5 16728090 16728394 -182901756 - AluJb SINE Alu -5 307 1 2202 87 3 3 chr5 16728934 16729234 -182900916 - AluY SINE Alu -11 300 1 1345 229 33 68 chr5 16732352 16732713 -182897437 + MLT2D LTR ERVL 1 373 -41 10092 148 77 92 chr5 16732713 16733027 -182897123 - Tigger1 DNA MER2_type 0 2418 2101 2082 96 7 7 chr5 16733027 16733319 -182896831 - AluY SINE Alu -19 292 1 10092 148 77 92 chr5 16733319 16734090 -182896060 - Tigger1 DNA MER2_type -317 2101 1320 1973 141 0 0 chr5 16734090 16734389 -182895761 - AluSx SINE Alu -13 299 1 10092 148 77 92 chr5 16734389 16735756 -182894394 - Tigger1 DNA MER2_type -1098 1320 1 1345 229 33 68 chr5 16735756 16735821 -182894329 + MLT2D LTR ERVL 373 412 -2 234 0 0 0 chr5 16735883 16735909 -182894241 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1792 101 42 49 chr5 16738723 16739010 -182891140 - AluSg SINE Alu -25 285 1 27 73 0 0 chr5 16741188 16741243 -182888907 + GC_rich Low_complexity Low_complexity 1 55 0 405 205 0 0 chr5 16741392 16741509 -182888641 + (CCG)n Simple_repeat Simple_repeat 3 119 0 2263 87 0 7 chr5 16743007 16743305 -182886845 - AluSp SINE Alu -17 296 1 719 307 24 5 chr5 16743440 16743652 -182886498 + MIR SINE MIR 6 221 -41 2108 177 55 13 chr5 16743954 16744411 -182885739 + L1MB3 LINE L1 5706 6181 -2 27 29 0 0 chr5 16744777 16744811 -182885339 + AT_rich Low_complexity Low_complexity 1 34 0 218 326 57 46 chr5 16745674 16745849 -182884301 + L2 LINE L2 3098 3274 -39 262 84 42 141 chr5 16746702 16746773 -182883377 + MER5A DNA MER1_type 1 64 -125 222 91 0 0 chr5 16747214 16747247 -182882903 + (A)n Simple_repeat Simple_repeat 1 33 0 773 142 0 0 chr5 16747831 16747944 -182882206 - FLAM_A SINE Alu -9 133 21 997 176 0 6 chr5 16748027 16748197 -182881953 - FAM SINE Alu -4 171 3 29 28 0 0 chr5 16749322 16749358 -182880792 + AT_rich Low_complexity Low_complexity 1 36 0 1440 182 13 48 chr5 16750025 16750338 -182879812 - AluJo SINE Alu -10 302 1 4690 210 96 9 chr5 16750499 16751654 -182878496 + Charlie1a DNA MER1_type 1 1255 -200 2172 112 6 6 chr5 16752187 16752499 -182877651 - AluSx SINE Alu 0 312 1 23 33 0 0 chr5 16753080 16753110 -182877040 + AT_rich Low_complexity Low_complexity 1 30 0 1695 158 3 38 chr5 16754035 16754351 -182875799 + AluJo SINE Alu 1 305 -7 316 255 32 21 chr5 16754436 16754530 -182875620 - MIR SINE MIR -18 244 150 28 48 0 0 chr5 16756069 16756111 -182874039 + AT_rich Low_complexity Low_complexity 1 42 0 435 268 27 0 chr5 16756966 16757078 -182873072 - L2 LINE L2 -2 3270 3156 358 305 74 47 chr5 16759542 16759732 -182870418 - L1 LINE L1 -2696 3450 3256 246 250 107 6 chr5 16759755 16759923 -182870227 - L1 LINE L1 -2933 3213 3029 1792 140 17 3 chr5 16761190 16761483 -182868667 - AluJo SINE Alu -15 297 1 21 0 0 0 chr5 16761888 16761909 -182868241 + AT_rich Low_complexity Low_complexity 1 21 0 801 196 82 26 chr5 16761913 16762107 -182868043 + MIR SINE MIR 57 261 -1 241 273 11 34 chr5 16762113 16762201 -182867949 + L1MC/D LINE L1 5783 5868 -1940 1615 209 191 9 chr5 16762809 16763253 -182866897 + MER77 LTR ERV1 77 601 -4 2346 84 0 3 chr5 16768801 16769112 -182861038 + AluY SINE Alu 1 310 -1 1092 147 11 0 chr5 16769259 16769436 -182860714 - AluSg/x SINE Alu -10 302 124 206 306 14 56 chr5 16770165 16770237 -182859913 - L2 LINE L2 -42 3230 3162 367 280 40 0 chr5 16770642 16770742 -182859408 + L2 LINE L2 3194 3297 -16 24 0 0 0 chr5 16771617 16771641 -182858509 + GC_rich Low_complexity Low_complexity 1 24 0 6633 122 144 125 chr5 16772590 16774267 -182855883 + pTR5 LTR ERV1 375 2438 0 267 296 31 31 chr5 16774316 16774414 -182855736 + L2 LINE L2 3173 3270 -2 1996 118 17 0 chr5 16774786 16775074 -182855076 + AluSx SINE Alu 1 293 -19 201 191 24 0 chr5 16775931 16775973 -182854177 + A-rich Low_complexity Low_complexity 4 46 0 248 311 47 0 chr5 16776355 16776461 -182853689 + L2 LINE L2 3189 3299 -14 251 295 21 0 chr5 16776505 16776600 -182853550 + MIR SINE MIR 46 142 -120 207 0 0 0 chr5 16780877 16780900 -182849250 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 27 0 0 0 chr5 16781555 16781582 -182848568 + AT_rich Low_complexity Low_complexity 1 27 0 2094 122 10 7 chr5 16781762 16782066 -182848084 - AluSx SINE Alu -7 305 1 207 69 0 0 chr5 16782850 16782879 -182847271 + (GGGA)n Simple_repeat Simple_repeat 3 31 0 207 200 33 33 chr5 16784433 16784493 -182845657 - MIR SINE MIR -126 136 77 309 300 11 0 chr5 16786107 16786197 -182843953 - MIR SINE MIR -107 155 65 192 238 139 30 chr5 16786279 16786380 -182843770 - L3 LINE CR1 -42 1535 1424 2223 123 20 0 chr5 16789700 16790001 -182840149 + AluSg SINE Alu 1 307 -3 1532 190 104 20 chr5 16791193 16791540 -182838610 + MLT1B LTR MaLR 3 378 -12 694 202 87 149 chr5 16791579 16791994 -182838156 + L1MC4a LINE L1 6194 6582 -1226 4204 80 25 6 chr5 16792021 16792571 -182837579 + THE1B-int LTR MaLR 1020 1580 0 2118 114 93 32 chr5 16792571 16792914 -182837236 + THE1B LTR MaLR 1 364 0 3788 226 92 29 chr5 16793003 16793598 -182836552 + L1MC4a LINE L1 6631 7187 -621 1676 164 80 22 chr5 16793598 16793922 -182836228 + MER61A LTR ERV1 1 343 0 3788 226 92 29 chr5 16793922 16794201 -182835949 + L1MC4a LINE L1 7187 7447 -361 516 118 53 0 chr5 16794201 16794277 -182835873 - MADE1 DNA Mariner 0 80 1 3788 226 92 29 chr5 16794277 16794504 -182835646 + L1MC4a LINE L1 7447 7803 -5 21 0 0 0 chr5 16794506 16794527 -182835623 + AT_rich Low_complexity Low_complexity 1 21 0 311 281 53 18 chr5 16796537 16796651 -182833499 + MIR3 SINE MIR 14 131 -77 219 281 209 13 chr5 16796687 16796840 -182833310 + MIR SINE MIR 2 184 -78 1838 181 65 11 chr5 16796947 16797317 -182832833 + MLT1B LTR MaLR 1 390 0 2003 125 17 0 chr5 16798000 16798332 -182831818 + AluSx SINE Alu 1 337 0 21 0 0 0 chr5 16798773 16798794 -182831356 + AT_rich Low_complexity Low_complexity 1 21 0 2280 90 3 3 chr5 16801243 16801532 -182828618 + AluSp SINE Alu 19 307 -6 5617 147 16 20 chr5 16801605 16802618 -182827532 - L1PB4 LINE L1 0 6156 5150 2299 118 0 0 chr5 16802618 16802923 -182827227 - AluSq SINE Alu -8 305 1 5617 147 16 20 chr5 16802923 16803323 -182826827 - L1PB4 LINE L1 -1006 5150 4750 2025 139 20 73 chr5 16804078 16804133 -182826017 - THE1C LTR MaLR 0 375 319 2225 54 58 4 chr5 16804133 16804453 -182825697 - AluY SINE Alu 0 311 1 1620 104 5 0 chr5 16804456 16804668 -182825482 - AluSp SINE Alu -17 296 84 2025 139 20 73 chr5 16804668 16805004 -182825146 - THE1C LTR MaLR -58 317 1 3739 117 9 0 chr5 16805014 16805542 -182824608 + LTR39 LTR ERV1 1 533 -250 666 135 85 35 chr5 16805655 16805796 -182824354 - MLT1C LTR MaLR -314 153 6 339 319 110 11 chr5 16805810 16806073 -182824077 + L1ME4a LINE L1 5830 6118 -3 1934 164 6 6 chr5 16806119 16806430 -182823720 + AluJo SINE Alu 1 311 -1 2052 125 16 29 chr5 16806660 16806971 -182823179 - AluJb SINE Alu -5 307 1 2316 100 3 0 chr5 16807082 16807372 -182822778 - AluSc SINE Alu -18 291 1 279 221 0 71 chr5 16807738 16807851 -182822299 + L1MA7 LINE L1 6164 6268 -23 270 0 0 0 chr5 16808296 16808326 -182821824 + (TC)n Simple_repeat Simple_repeat 1 30 0 306 332 0 27 chr5 16808750 16808937 -182821213 + L1MC5 LINE L1 7730 7911 -50 1993 106 4 7 chr5 16809479 16809752 -182820398 + AluSx SINE Alu 2 273 -39 600 264 197 23 chr5 16810118 16810690 -182819460 - L2 LINE L2 -75 3238 2579 1622 169 36 7 chr5 16811502 16811781 -182818369 - AluJb SINE Alu -25 287 1 549 243 93 9 chr5 16812173 16812373 -182817777 - L2 LINE L2 -1364 1950 1729 180 0 0 0 chr5 16812373 16812393 -182817757 + (GGGTG)n Simple_repeat Simple_repeat 5 24 0 549 243 93 9 chr5 16812393 16812406 -182817744 - L2 LINE L2 -1585 1729 1719 214 293 13 27 chr5 16812630 16812705 -182817445 - MER5B DNA MER1_type -88 90 17 844 104 30 37 chr5 16812789 16812923 -182817227 - AluSq/x SINE Alu -179 133 1 2375 86 3 0 chr5 16813073 16813364 -182816786 + AluSc SINE Alu 1 292 -17 1252 213 46 46 chr5 16813375 16813764 -182816386 + LTR37A LTR ERV1 38 426 0 2291 108 0 0 chr5 16814020 16814326 -182815824 + AluSx SINE Alu 1 306 -6 832 259 72 53 chr5 16814344 16814607 -182815543 - MLT1J LTR MaLR -136 375 108 2472 81 3 0 chr5 16815209 16815519 -182814631 - AluSp SINE Alu -2 311 1 1028 243 186 22 chr5 16816041 16816622 -182813528 - L2 LINE L2 0 3313 2635 241 325 105 10 chr5 16816871 16817071 -182813079 + L2 LINE L2 2931 3149 -164 585 307 76 4 chr5 16817746 16817971 -182812179 - MIR SINE MIR -5 257 17 633 243 38 34 chr5 16818604 16818625 -182811525 - MER20B DNA MER1_type -36 747 728 2190 87 24 0 chr5 16818625 16818913 -182811237 + AluSx SINE Alu 1 295 -17 633 243 38 34 chr5 16818913 16819130 -182811020 - MER20B DNA MER1_type -55 728 508 380 127 42 119 chr5 16819363 16819481 -182810669 + MER31-int LTR ERV1 707 815 -6722 2280 115 0 7 chr5 16819541 16819846 -182810304 + AluSc SINE Alu 1 303 -6 483 177 53 25 chr5 16819915 16820049 -182810101 + MER31-int LTR ERV1 858 2644 -3687 325 222 0 0 chr5 16820049 16820109 -182810041 + MER31A LTR ERV1 26 85 -400 1749 192 26 0 chr5 16820109 16820491 -182809659 - MER54A LTR ERVL 0 793 1 268 191 0 0 chr5 16820510 16820552 -182809598 + MER31-int LTR ERV1 772 813 -4123 2341 86 0 0 chr5 16820645 16820948 -182809202 + AluY SINE Alu 1 303 -8 2068 162 71 27 chr5 16821001 16821408 -182808742 - MER61B LTR ERV1 0 425 1 275 87 0 0 chr5 16821449 16821495 -182808655 - AluSc SINE Alu 0 299 254 1808 60 60 4 chr5 16821600 16821832 -182808318 - AluY SINE Alu -66 245 1 288 226 16 0 chr5 16822002 16822064 -182808086 + MIR SINE MIR 89 151 -111 392 228 24 82 chr5 16822336 16822430 -182807720 + MER87 LTR ERV1 311 409 -147 2444 74 10 0 chr5 16822430 16822726 -182807424 + AluSp SINE Alu 1 299 -14 392 228 24 82 chr5 16822726 16822763 -182807387 + MER87 LTR ERV1 409 447 -109 2303 98 0 0 chr5 16822763 16823105 -182807045 + AluSx SINE Alu 1 342 0 392 228 24 82 chr5 16823105 16823199 -182806951 + MER87 LTR ERV1 447 516 -40 1226 124 0 0 chr5 16823251 16823428 -182806722 - AluSg/x SINE Alu -4 306 130 335 236 50 87 chr5 16823428 16823589 -182806561 + MER20B DNA MER1_type 57 211 -572 2217 116 7 3 chr5 16823880 16824181 -182805969 - AluSp SINE Alu -11 302 1 2309 102 0 10 chr5 16824410 16824723 -182805427 - AluSq SINE Alu -1 312 3 2379 120 7 62 chr5 16824818 16825234 -182804916 - MER57A LTR ERV1 -10 393 1 277 326 62 16 chr5 16826321 16826450 -182803700 - MLT1I LTR MaLR -175 234 100 1666 124 65 46 chr5 16827067 16827373 -182802777 + AluJo SINE Alu 1 312 0 871 280 8 15 chr5 16827382 16827643 -182802507 - MIR SINE MIR 0 262 4 3106 124 11 2 chr5 16827912 16828364 -182801786 - MER1A DNA MER1_type -73 456 1 319 348 49 57 chr5 16830525 16830769 -182799381 - L2 LINE L2 -1 3271 3030 653 218 78 5 chr5 16830885 16831078 -182799072 + L1M4 LINE L1 4969 5175 -971 975 172 15 15 chr5 16831186 16831384 -182798766 - AluSc SINE Alu -111 198 1 321 193 35 0 chr5 16831409 16831466 -182798684 - L1MC4 LINE L1 -1338 6704 6646 316 290 47 75 chr5 16832583 16832797 -182797353 - MIR SINE MIR -10 252 45 21 36 0 0 chr5 16833206 16833234 -182796916 + AT_rich Low_complexity Low_complexity 1 28 0 232 363 75 7 chr5 16833675 16833821 -182796329 - MIR SINE MIR -75 187 32 183 214 95 0 chr5 16834569 16834611 -182795539 + MIR SINE MIR 122 167 -95 358 173 53 40 chr5 16835742 16835817 -182794333 - L2 LINE L2 -39 3274 3199 470 179 257 14 chr5 16835983 16836123 -182794027 - MER5A DNA MER1_type -6 183 10 426 314 57 48 chr5 16836588 16836817 -182793333 - MIR SINE MIR -12 250 20 2334 70 0 3 chr5 16837732 16838030 -182792120 - AluSp SINE Alu -16 297 1 1502 152 81 60 chr5 16838604 16838876 -182791274 + MER2 DNA MER2_type 3 285 -59 2284 41 41 7 chr5 16838876 16839170 -182790980 + AluY SINE Alu 1 304 -7 1502 152 81 60 chr5 16839170 16839232 -182790918 + MER2 DNA MER2_type 285 344 0 38 0 0 0 chr5 16839647 16839685 -182790465 + AT_rich Low_complexity Low_complexity 1 38 0 1785 137 20 10 chr5 16839685 16839985 -182790165 - AluSx SINE Alu -9 303 1 358 287 23 0 chr5 16840038 16840125 -182790025 + MIR SINE MIR 44 132 -76 397 272 34 20 chr5 16840940 16841087 -182789063 + L2 LINE L2 3165 3313 0 2109 101 3 3 chr5 16841127 16841425 -182788725 - AluSx SINE Alu -14 298 1 418 257 51 8 chr5 16841530 16841663 -182788487 + MIR SINE MIR 4 142 -66 3582 135 20 58 chr5 16841931 16842417 -182787733 - L1MB3 LINE L1 -2 6181 5725 2036 118 0 0 chr5 16842417 16842704 -182787446 + AluSq SINE Alu 1 287 -26 3582 135 20 58 chr5 16842704 16842877 -182787273 - L1MB3 LINE L1 -458 5725 5547 556 295 29 17 chr5 16843347 16843520 -182786630 + MIR SINE MIR 71 245 -17 2186 109 0 0 chr5 16843574 16843877 -182786273 + AluY SINE Alu 1 303 -8 506 271 59 56 chr5 16843880 16844186 -182785964 + L1MC4a LINE L1 5600 5906 -1902 1411 156 52 42 chr5 16844364 16844672 -182785478 - AluJo SINE Alu -1 311 1 595 240 65 0 chr5 16845093 16845247 -182784903 + MIR SINE MIR 29 192 -70 492 311 36 6 chr5 16845452 16845619 -182784531 - MER5B DNA MER1_type 0 178 7 2785 50 3 0 chr5 16846549 16846890 -182783260 + L1PA6 LINE L1 5812 6153 -1 526 293 66 0 chr5 16846920 16847087 -182783063 - MIR SINE MIR -31 231 54 185 279 50 71 chr5 16847096 16847236 -182782914 + L2 LINE L2 2725 2861 -453 436 221 154 5 chr5 16848107 16848302 -182781848 - L1ME4a LINE L1 -4 6117 5894 416 238 0 55 chr5 16848629 16848793 -182781357 - LTR23-int LTR ERV1 -3250 1873 1719 1065 186 0 19 chr5 16848892 16849102 -182781048 - AluJ SINE Alu -1 311 106 1885 217 156 25 chr5 16849102 16849742 -182780408 - MER50 LTR ERV1 -1 733 10 674 180 9 0 chr5 16849745 16849856 -182780294 - AluJ SINE Alu -199 113 2 560 184 74 134 chr5 16849920 16850020 -182780130 - LTR23-int LTR ERV1 -3448 1629 1525 2260 93 3 3 chr5 16850020 16850333 -182779817 - AluSq SINE Alu 0 313 1 560 184 74 134 chr5 16850333 16850540 -182779610 - LTR23-int LTR ERV1 -3552 1525 1307 3697 131 22 90 chr5 16850540 16851282 -182778868 + LTR8 LTR ERV1 1 691 0 560 184 74 134 chr5 16851282 16851315 -182778835 - LTR23-int LTR ERV1 -3770 1307 1274 1953 90 3 47 chr5 16851315 16851666 -182778484 + AluSc SINE Alu 1 309 0 560 184 74 134 chr5 16851666 16851794 -182778356 - LTR23-int LTR ERV1 -3803 1274 1095 1476 134 55 8 chr5 16851812 16852066 -182778084 - AluJb SINE Alu -25 287 22 235 103 26 0 chr5 16852172 16852211 -182777939 - THE1A LTR MaLR -315 40 1 225 303 22 22 chr5 16852285 16852374 -182777776 - L2 LINE L2 0 3313 3225 277 366 23 7 chr5 16852955 16853139 -182777011 + MIR SINE MIR 20 201 -61 678 329 35 24 chr5 16853235 16853490 -182776660 - MIR SINE MIR -3 259 2 282 279 220 56 chr5 16853644 16853907 -182776243 - L2 LINE L2 -379 2935 2602 904 119 4 187 chr5 16853907 16854142 -182776008 + 7SK RNA RNA 1 192 -1 282 279 220 56 chr5 16854142 16854219 -182775931 - L2 LINE L2 -712 2602 2539 330 300 82 29 chr5 16854351 16854521 -182775629 + MIR SINE MIR 10 188 -74 585 281 70 66 chr5 16854571 16854773 -182775377 - MIR SINE MIR -13 249 44 1989 88 30 14 chr5 16854773 16855070 -182775080 + AluY SINE Alu 1 302 -9 585 281 70 66 chr5 16855070 16855109 -182775041 - MIR SINE MIR -218 44 7 610 272 169 54 chr5 16855109 16855517 -182774633 - MLT1L LTR MaLR -3 612 158 255 236 73 0 chr5 16855572 16855627 -182774523 + MLT1H1 LTR MaLR 72 130 -425 349 256 101 79 chr5 16855820 16856047 -182774103 + L2 LINE L2 3075 3306 -7 385 265 66 22 chr5 16856284 16856420 -182773730 - MIR SINE MIR -32 230 89 211 256 0 0 chr5 16856532 16856571 -182773579 - L3 LINE CR1 -107 1470 1432 180 227 0 23 chr5 16857355 16857399 -182772751 + MIR SINE MIR 164 206 -56 234 275 123 118 chr5 16857598 16857809 -182772341 - L2 LINE L2 -6 3266 3055 2470 181 9 5 chr5 16857883 16858315 -182771835 - Tigger2a DNA MER2_type 0 434 1 242 303 57 16 chr5 16858818 16858940 -182771210 + LTR24 LTR ERV1 198 324 -143 2054 127 0 10 chr5 16859071 16859379 -182770771 + AluSx SINE Alu 1 305 -7 240 217 17 0 chr5 16860324 16860384 -182769766 + L1MC5 LINE L1 7179 7239 -722 739 238 45 49 chr5 16860410 16860675 -182769475 + L1MC5 LINE L1 7299 7562 -399 688 188 4 90 chr5 16860684 16860939 -182769211 + MER106A DNA MER1_type 1 233 -3 523 152 76 23 chr5 16861021 16861153 -182768997 + L1MC5 LINE L1 7609 7747 -214 568 257 61 0 chr5 16861299 16861447 -182768703 + Charlie8 DNA MER1_type 5 161 -2256 2880 198 23 61 chr5 16861582 16862284 -182767866 - LTR8 LTR ERV1 -16 675 1 1846 115 0 35 chr5 16862346 16862660 -182767490 + AluSq SINE Alu 1 303 -10 579 298 111 5 chr5 16862669 16862877 -182767273 - MIR SINE MIR -8 254 25 23 54 0 0 chr5 16863096 16863133 -182767017 + AT_rich Low_complexity Low_complexity 1 37 0 2477 201 26 78 chr5 16863147 16863520 -182766630 - MER97b DNA MER1_type? -367 686 362 1995 139 3 0 chr5 16863520 16863815 -182766335 + AluSx SINE Alu 1 296 -16 2477 201 26 78 chr5 16863815 16864123 -182766027 - MER97b DNA MER1_type? -691 362 40 298 177 292 44 chr5 16864272 16864385 -182765765 + MIR3 SINE MIR 6 146 -62 686 210 145 47 chr5 16864525 16864739 -182765411 - MIR SINE MIR 0 262 28 355 269 37 30 chr5 16865150 16865284 -182764866 - MIR SINE MIR -115 147 13 230 162 176 27 chr5 16866557 16866631 -182763519 + MLT1I LTR MaLR 281 365 -44 548 243 14 0 chr5 16866679 16866819 -182763331 - L3 LINE CR1 -42 1535 1394 415 278 11 28 chr5 16867052 16867232 -182762918 + (TGG)n Simple_repeat Simple_repeat 3 179 0 215 302 75 9 chr5 16868288 16868394 -182761756 + MIR SINE MIR 79 191 -71 377 376 18 0 chr5 16869318 16869483 -182760667 + MIR SINE MIR 86 253 -9 1392 254 13 11 chr5 16870185 16870572 -182759578 + MER54A LTR ERVL 472 896 -5 28 48 0 0 chr5 16871658 16871700 -182758450 + AT_rich Low_complexity Low_complexity 1 42 0 190 335 98 69 chr5 16871768 16871941 -182758209 + L3 LINE CR1 35 212 -1365 2353 64 0 3 chr5 16872606 16872904 -182757246 + AluY SINE Alu 8 304 -7 1398 197 10 27 chr5 16874656 16874955 -182755195 - AluJo SINE Alu -18 294 1 2204 119 0 0 chr5 16875022 16875334 -182754816 - AluSx SINE Alu 0 312 1 478 242 22 24 chr5 16875879 16876071 -182754079 + MIR SINE MIR 19 252 -10 335 297 27 18 chr5 16876442 16876553 -182753597 - L2 LINE L2 -1 3312 3201 293 156 0 47 chr5 16877657 16877721 -182752429 - L1MB2 LINE L1 0 6171 6111 211 258 48 32 chr5 16880877 16880939 -182749211 - L2 LINE L2 -5 3267 3205 477 0 0 0 chr5 16884274 16884327 -182745823 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 2061 114 3 3 chr5 16884363 16884662 -182745488 + AluSx SINE Alu 1 299 -13 712 177 0 16 chr5 16885885 16886009 -182744141 + FLAM_A SINE Alu 1 122 -11 207 0 0 0 chr5 16886966 16886989 -182743161 + (T)n Simple_repeat Simple_repeat 1 23 0 603 170 0 0 chr5 16887007 16887113 -182743037 + FRAM SINE Alu 70 175 -1 2730 173 44 23 chr5 16888099 16888639 -182741511 - L1MB3 LINE L1 -12 6171 5617 1976 181 34 0 chr5 16888639 16888992 -182741158 + MLT1A1 LTR MaLR 1 365 0 2730 173 44 23 chr5 16888992 16889022 -182741128 - L1MB3 LINE L1 -566 5617 5589 254 304 59 20 chr5 16889146 16889248 -182740902 + L2 LINE L2 2701 2806 -508 213 286 0 0 chr5 16889254 16889303 -182740847 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 0 0 0 chr5 16893256 16893276 -182736874 + (A)n Simple_repeat Simple_repeat 1 20 0 1932 125 14 0 chr5 16893719 16894062 -182736088 - AluSx SINE Alu 0 347 1 1862 178 65 11 chr5 16894745 16895115 -182735035 - MLT1B LTR MaLR 0 390 1 296 291 187 25 chr5 16895173 16895376 -182734774 - MIR SINE MIR -25 237 2 362 272 53 18 chr5 16895412 16895526 -182734624 - MIR3 SINE MIR -77 131 14 21 0 0 0 chr5 16897535 16897556 -182732594 + AT_rich Low_complexity Low_complexity 1 21 0 3806 226 92 29 chr5 16897558 16897785 -182732365 - L1MC4a LINE L1 -5 7803 7592 512 118 53 0 chr5 16897785 16897861 -182732289 + MADE1 DNA Mariner 1 80 0 3806 226 92 29 chr5 16897861 16898140 -182732010 - L1MC4a LINE L1 -216 7592 7332 1684 167 80 22 chr5 16898140 16898464 -182731686 - MER61A LTR ERV1 0 343 1 3806 226 92 29 chr5 16898464 16899059 -182731091 - L1MC4a LINE L1 -476 7332 6631 2123 114 93 32 chr5 16899148 16899491 -182730659 - THE1B LTR MaLR 0 364 1 4222 80 25 6 chr5 16899491 16900041 -182730109 - THE1B-int LTR MaLR 0 1580 1020 659 207 80 142 chr5 16900068 16900483 -182729667 - L1MC4a LINE L1 -1226 6582 6194 1546 192 103 26 chr5 16900522 16900871 -182729279 - MLT1B LTR MaLR -12 378 3 2112 120 20 0 chr5 16902063 16902364 -182727786 - AluSg SINE Alu -3 307 1 234 238 139 30 chr5 16905684 16905785 -182724365 + L3 LINE CR1 1424 1535 -42 344 300 11 0 chr5 16905867 16905957 -182724193 + MIR SINE MIR 65 155 -107 263 216 160 48 chr5 16907513 16907638 -182722512 + MIR SINE MIR 2 140 -122 207 69 0 0 chr5 16909186 16909215 -182720935 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1971 122 10 7 chr5 16909999 16910303 -182719847 + AluSx SINE Alu 1 305 -7 27 0 0 0 chr5 16910483 16910510 -182719640 + AT_rich Low_complexity Low_complexity 1 27 0 207 0 0 0 chr5 16911165 16911188 -182718962 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 293 295 21 0 chr5 16915465 16915560 -182714590 - MIR SINE MIR -120 142 46 294 311 47 0 chr5 16915604 16915710 -182714440 - L2 LINE L2 -14 3299 3189 201 191 24 0 chr5 16916092 16916134 -182714016 + T-rich Low_complexity Low_complexity 4 46 0 1996 118 17 0 chr5 16916991 16917279 -182712871 - AluSx SINE Alu -19 293 1 267 296 31 31 chr5 16917651 16917749 -182712401 - L2 LINE L2 -2 3270 3173 6649 122 144 125 chr5 16917798 16919475 -182710675 - pTR5 LTR ERV1 0 2438 375 28 0 0 0 chr5 16920424 16920452 -182709698 + GC_rich Low_complexity Low_complexity 1 28 0 367 280 40 0 chr5 16921325 16921425 -182708725 - L2 LINE L2 -16 3297 3194 206 306 14 56 chr5 16921830 16921902 -182708248 + L2 LINE L2 3162 3230 -42 1092 147 11 0 chr5 16922631 16922808 -182707342 + AluSg/x SINE Alu 124 302 -10 2313 87 0 3 chr5 16922955 16923266 -182706884 - AluY SINE Alu -1 310 1 1615 209 191 9 chr5 16928814 16929258 -182700892 - MER77 LTR ERV1 -4 601 77 241 273 11 34 chr5 16929866 16929954 -182700196 - L1MC/D LINE L1 -1940 5868 5783 801 196 82 26 chr5 16929960 16930154 -182699996 - MIR SINE MIR -1 261 57 21 0 0 0 chr5 16930158 16930179 -182699971 + AT_rich Low_complexity Low_complexity 1 21 0 1792 140 17 3 chr5 16930584 16930877 -182699273 + AluJo SINE Alu 1 297 -15 246 250 107 6 chr5 16932140 16932308 -182697842 + L1 LINE L1 3029 3213 -2933 358 305 74 47 chr5 16932331 16932521 -182697629 + L1 LINE L1 3256 3450 -2696 439 261 27 0 chr5 16934982 16935093 -182695057 + L2 LINE L2 3157 3270 -2 28 48 0 0 chr5 16935950 16935992 -182694158 + AT_rich Low_complexity Low_complexity 1 42 0 316 255 32 21 chr5 16937530 16937624 -182692526 + MIR SINE MIR 150 244 -18 1695 158 3 38 chr5 16937709 16938025 -182692125 - AluJo SINE Alu -7 305 1 23 33 0 0 chr5 16938949 16938979 -182691171 + AT_rich Low_complexity Low_complexity 1 30 0 2172 112 6 6 chr5 16939560 16939872 -182690278 + AluSx SINE Alu 1 312 0 4706 209 96 9 chr5 16940405 16941560 -182688590 - Charlie1a DNA MER1_type -200 1255 1 1471 176 13 48 chr5 16941721 16942034 -182688116 + AluJo SINE Alu 1 302 -10 29 28 0 0 chr5 16942701 16942737 -182687413 + AT_rich Low_complexity Low_complexity 1 36 0 997 176 0 6 chr5 16943862 16944032 -182686118 + FAM SINE Alu 3 171 -4 773 142 0 0 chr5 16944115 16944228 -182685922 + FLAM_A SINE Alu 21 133 -9 222 91 0 0 chr5 16944812 16944845 -182685305 + (T)n Simple_repeat Simple_repeat 1 33 0 262 84 42 141 chr5 16945286 16945357 -182684793 - MER5A DNA MER1_type -125 64 1 218 326 57 46 chr5 16946210 16946385 -182683765 - L2 LINE L2 -39 3274 3098 27 29 0 0 chr5 16947248 16947282 -182682868 + AT_rich Low_complexity Low_complexity 1 34 0 2108 177 55 13 chr5 16947648 16948105 -182682045 - L1MB3 LINE L1 -2 6181 5706 719 307 24 5 chr5 16948407 16948619 -182681531 - MIR SINE MIR -41 221 6 2263 87 0 7 chr5 16948754 16949052 -182681098 + AluSp SINE Alu 1 296 -17 405 205 0 0 chr5 16950550 16950667 -182679483 + (CGG)n Simple_repeat Simple_repeat 3 119 0 27 73 0 0 chr5 16950816 16950871 -182679279 + GC_rich Low_complexity Low_complexity 1 55 0 1792 101 42 49 chr5 16953047 16953334 -182676816 + AluSg SINE Alu 1 285 -25 234 0 0 0 chr5 16956149 16956175 -182673975 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1345 229 33 68 chr5 16956237 16956302 -182673848 - MLT2D LTR ERVL -2 412 346 10174 148 78 91 chr5 16956302 16957667 -182672483 + Tigger1 DNA MER2_type 1 1383 -1035 1959 144 0 0 chr5 16957667 16957966 -182672184 + AluSx SINE Alu 1 299 -13 10174 148 78 91 chr5 16957966 16958737 -182671413 + Tigger1 DNA MER2_type 1383 2101 -317 2082 96 7 7 chr5 16958737 16959029 -182671121 + AluY SINE Alu 1 292 -19 10174 148 78 91 chr5 16959029 16959343 -182670807 + Tigger1 DNA MER2_type 2101 2418 0 1345 229 33 68 chr5 16959343 16959704 -182670446 - MLT2D LTR ERVL -68 346 1 2202 87 3 3 chr5 16962820 16963120 -182667030 + AluY SINE Alu 1 300 -11 1745 145 23 13 chr5 16963660 16963964 -182666186 + AluJb SINE Alu 1 307 -5 235 200 0 0 chr5 16964062 16964112 -182666038 + L1ME3A LINE L1 6113 6162 -8 22 0 0 0 chr5 16964244 16964266 -182665884 + AT_rich Low_complexity Low_complexity 1 22 0 904 237 68 23 chr5 16965251 16965559 -182664591 - MER33 DNA MER1_type 0 324 3 292 301 70 6 chr5 16965883 16966039 -182664111 + MER105 DNA DNA 2 167 -37 442 233 137 9 chr5 16966578 16966797 -182663353 - MLT1H LTR MaLR -230 319 73 346 188 82 0 chr5 16968597 16968682 -182661468 + MER69A DNA AcHobo 32 123 -54 579 282 79 0 chr5 16969464 16969666 -182660484 + MIR SINE MIR 35 252 -10 225 231 0 19 chr5 16969783 16969835 -182660315 - MIR SINE MIR -118 144 94 454 221 60 20 chr5 16974441 16974590 -182655560 - L1M4 LINE L1 -1383 4763 4609 477 0 0 0 chr5 16974676 16974729 -182655421 + (TC)n Simple_repeat Simple_repeat 2 54 0 477 0 0 0 chr5 16974728 16974781 -182655369 + (TA)n Simple_repeat Simple_repeat 2 54 0 2096 70 11 21 chr5 16974781 16975068 -182655082 - AluY SINE Alu -27 284 1 619 223 74 75 chr5 16975075 16975325 -182654825 - L1ME3 LINE L1 -19 6147 5894 * 4412 205 54 24 chr5 16975320 16975395 -182654755 - L1MD1 LINE L1 0 6636 6565 2277 101 0 3 chr5 16975395 16975703 -182654447 + AluSp SINE Alu 1 307 -6 4412 205 54 24 chr5 16975703 16976271 -182653879 - L1MD1 LINE L1 -71 6565 6016 1786 103 10 164 chr5 16976271 16976667 -182653483 - MER1B DNA MER1_type -2 335 1 4412 205 54 24 chr5 16976667 16977338 -182652812 - L1MD1 LINE L1 -620 6016 5367 2138 108 0 0 chr5 16977338 16977635 -182652515 + AluY SINE Alu 1 297 -14 4412 205 54 24 chr5 16977635 16978263 -182651887 - L1MD1 LINE L1 -1269 5367 4628 2126 105 6 10 chr5 16978279 16978592 -182651558 - AluSx SINE Alu 0 312 1 497 182 23 0 chr5 16978627 16978715 -182651435 + Tigger5 DNA MER2_type 2234 2323 0 1530 171 51 9 chr5 16978715 16979031 -182651119 - L1MD1 LINE L1 -4332 2208 1880 437 266 42 91 chr5 16979036 16979277 -182650873 - MER34 LTR ERV1 0 542 314 1108 212 17 9 chr5 16979297 16979528 -182650622 + AluJo SINE Alu 1 233 -79 480 163 12 0 chr5 16979528 16979608 -182650542 - AluS SINE Alu -229 83 3 450 122 14 0 chr5 16979610 16979684 -182650466 - AluS SINE Alu -7 303 229 532 145 0 0 chr5 16979685 16979761 -182650389 + AluJo SINE Alu 217 292 -20 2423 224 43 8 chr5 16980021 16980571 -182649579 - L1MD1 LINE L1 -5638 902 18 5804 109 9 56 chr5 16981538 16982230 -182647920 - L1PA14 LINE L1 -3 6158 5557 2444 87 0 0 chr5 16982230 16982529 -182647621 - AluSx SINE Alu -11 301 3 5804 109 9 56 chr5 16982529 16983260 -182646890 - L1PA14 LINE L1 -604 5557 4793 2384 98 7 0 chr5 16983640 16983947 -182646203 + AluSx SINE Alu 1 309 -3 1124 251 98 24 chr5 16984117 16984567 -182645583 - MLT1D LTR MaLR 0 505 23 293 282 39 0 chr5 16985295 16985373 -182644777 + L2 LINE L2 3136 3216 -56 2300 106 0 0 chr5 16985434 16985735 -182644415 - AluSx SINE Alu -1 311 11 292 200 70 30 chr5 16986320 16986420 -182643730 - LTR33 LTR ERVL -2 519 416 508 232 86 7 chr5 16986470 16986621 -182643529 - LTR33 LTR ERVL -338 183 21 4745 139 39 44 chr5 16986658 16987041 -182643109 + L1MC1 LINE L1 5452 5836 -497 2157 128 0 0 chr5 16987041 16987339 -182642811 + AluSx SINE Alu 3 300 -12 4745 139 39 44 chr5 16987339 16987833 -182642317 + L1MC1 LINE L1 5836 6324 -9 2223 104 0 0 chr5 16987836 16988157 -182641993 + AluSx SINE Alu 3 323 0 2416 98 0 0 chr5 16989136 16989443 -182640707 - AluSx SINE Alu -5 307 1 22 0 0 0 chr5 16989572 16989594 -182640556 + AT_rich Low_complexity Low_complexity 1 22 0 2364 78 3 3 chr5 16990184 16990479 -182639671 - AluSc SINE Alu -14 295 1 1186 233 64 39 chr5 16990738 16990848 -182639302 + L1ME LINE L1 4367 4473 -1673 2317 99 0 3 chr5 16990848 16991142 -182639008 - AluSg SINE Alu -17 293 1 1186 233 64 39 chr5 16991142 16991469 -182638681 + L1ME LINE L1 4473 4815 -1331 2140 114 14 3 chr5 16991503 16991800 -182638350 - AluSx SINE Alu -12 300 1 242 296 0 0 chr5 16992262 16992343 -182637807 + L1ME LINE L1 5727 5807 -314 22 0 0 0 chr5 16992401 16992423 -182637727 + AT_rich Low_complexity Low_complexity 1 22 0 329 143 16 16 chr5 16992695 16992758 -182637392 + MER5A DNA MER1_type 9 71 -118 1866 98 4 0 chr5 16992835 16993081 -182637069 - AluSx SINE Alu -10 302 56 263 234 290 0 chr5 16993353 16993460 -182636690 + MER5A DNA MER1_type 46 183 -6 2183 115 13 0 chr5 16993604 16993908 -182636242 + AluSp SINE Alu 2 309 -4 358 253 152 0 chr5 16994722 16994821 -182635329 - MER81 DNA DNA 0 114 1 2481 57 3 29 chr5 16996144 16996459 -182633691 - AluY SINE Alu -4 307 1 2074 113 46 65 chr5 16996550 16996878 -182633272 + THE1B LTR MaLR 1 323 -41 2603 64 0 6 chr5 16996878 16997189 -182632961 - AluY SINE Alu -2 309 1 2074 113 46 65 chr5 16997189 16997231 -182632919 + THE1B LTR MaLR 323 364 0 2379 95 3 9 chr5 16998241 16998556 -182631594 - AluSq SINE Alu 0 313 1 719 208 8 0 chr5 16998603 16998728 -182631422 + FLAM_A SINE Alu 2 127 -6 825 197 26 0 chr5 16999171 16999323 -182630827 + FRAM SINE Alu 1 156 -20 1248 174 4 37 chr5 16999386 16999628 -182630522 - L1MD3 LINE L1 -1022 6973 6740 2021 113 3 7 chr5 16999629 16999935 -182630215 + AluSx SINE Alu 1 305 0 2535 53 0 10 chr5 17000033 17000332 -182629818 - AluY SINE Alu -15 296 1 8263 166 23 88 chr5 17000333 17001426 -182628724 - L1M2 LINE L1 -1765 5443 4280 2188 122 20 0 chr5 17001426 17001729 -182628421 - AluSx SINE Alu 0 312 4 8263 166 23 88 chr5 17001729 17002224 -182627926 - L1M2 LINE L1 -2928 4280 3754 2311 118 0 6 chr5 17002224 17002538 -182627612 - AluSx SINE Alu 0 312 1 8263 166 23 88 chr5 17002538 17002857 -182627293 - L1M2 LINE L1 -3454 3754 3686 1734 114 0 0 chr5 17002857 17003084 -182627066 - AluSg/x SINE Alu -8 302 76 8263 166 23 88 chr5 17003084 17003303 -182626847 - L1M2 LINE L1 -3522 3686 3454 2259 127 99 23 chr5 17003306 17003699 -182626451 - MSTA LTR MaLR 0 428 6 5048 198 89 41 chr5 17003755 17005193 -182624957 - L1M2 LINE L1 -3788 3420 1920 327 260 53 77 chr5 17005193 17005362 -182624788 - MLT1K LTR MaLR -19 569 405 466 245 76 54 chr5 17005363 17005706 -182624444 - L1M2 LINE L1 -5297 1912 1539 * 2097 253 137 30 chr5 17005682 17006381 -182623769 - L1M2 LINE L1 -6399 810 37 1167 134 21 0 chr5 17006381 17006567 -182623583 - AluSg/x SINE Alu -2 310 121 278 213 0 0 chr5 17006569 17006616 -182623534 - L1 LINE L1 -6790 59 13 232 261 0 31 chr5 17006770 17006835 -182623315 + MLT1K LTR MaLR 1 63 -525 411 259 85 110 chr5 17006884 17007320 -182622830 + MLT1K LTR MaLR 164 588 0 355 241 7 7 chr5 17008553 17008690 -182621460 + CT-rich Low_complexity Low_complexity 2 138 0 453 321 18 87 chr5 17009258 17009292 -182620858 - L2 LINE L2 -1 3312 3277 294 29 0 0 chr5 17009292 17009327 -182620823 + (TG)n Simple_repeat Simple_repeat 1 35 0 453 321 18 87 chr5 17009327 17009458 -182620692 - L2 LINE L2 -36 3277 3139 2224 135 15 42 chr5 17009458 17009859 -182620291 + MLT1B LTR MaLR 1 390 0 453 321 18 87 chr5 17009859 17010072 -182620078 - L2 LINE L2 -174 3139 2959 14481 118 32 53 chr5 17010297 17010474 -182619676 - Tigger1 DNA MER2_type 0 2418 2239 2179 121 7 0 chr5 17010474 17010771 -182619379 + AluSc SINE Alu 1 299 -10 14481 118 32 53 chr5 17010771 17011196 -182618954 - Tigger1 DNA MER2_type -179 2239 1807 2432 91 0 0 chr5 17011196 17011505 -182618645 + AluSg SINE Alu 1 309 -1 14481 118 32 53 chr5 17011505 17013370 -182616780 - Tigger1 DNA MER2_type -611 1807 1 2068 238 24 24 chr5 17014278 17014736 -182615414 + LTR40a LTR ERVL 62 519 0 22 56 0 0 chr5 17014754 17014790 -182615360 + AT_rich Low_complexity Low_complexity 1 36 0 1896 88 0 0 chr5 17014848 17015076 -182615074 - AluSc SINE Alu -21 288 61 555 329 32 5 chr5 17015116 17015332 -182614818 - MIR SINE MIR -4 258 37 2011 178 20 0 chr5 17015478 17015826 -182614324 + MLT1A1 LTR MaLR 11 365 0 1885 117 50 18 chr5 17016285 17016567 -182613583 + AluSq SINE Alu 1 291 -22 2190 133 33 28 chr5 17017341 17017703 -182612447 + THE1B LTR MaLR 1 364 0 2504 78 0 0 chr5 17018269 17018575 -182611575 - AluY SINE Alu -5 306 1 236 307 58 58 chr5 17018601 17018738 -182611412 + MER5B DNA MER1_type 20 156 -22 2791 135 57 60 chr5 17018920 17019521 -182610629 - MER4D LTR ERV1 -1 865 307 2285 117 0 0 chr5 17019521 17019820 -182610330 + AluSx SINE Alu 1 299 -13 4031 145 45 24 chr5 17019829 17020110 -182610040 + MER50 LTR ERV1 1 275 -459 1934 108 0 7 chr5 17020110 17020388 -182609762 - AluSc SINE Alu 0 309 34 4031 145 45 24 chr5 17020388 17020803 -182609347 + MER50 LTR ERV1 275 711 -23 4583 119 26 45 chr5 17020804 17021489 -182608661 + MER49 LTR ERV1 196 892 -31 2081 130 0 26 chr5 17021489 17021796 -182608354 + AluSx SINE Alu 1 299 -13 222 37 0 0 chr5 17021796 17021823 -182608327 + (GA)n Simple_repeat Simple_repeat 2 28 0 4583 119 26 45 chr5 17021823 17021878 -182608272 + MER49 LTR ERV1 890 923 0 2368 99 0 7 chr5 17022282 17022584 -182607566 + AluSx SINE Alu 2 301 -11 2227 105 3 0 chr5 17023829 17024125 -182606025 + AluSp SINE Alu 1 297 -16 316 229 160 38 chr5 17024602 17024733 -182605417 - MIR SINE MIR 0 262 116 946 188 17 6 chr5 17024740 17024916 -182605234 - MLT1A1 LTR MaLR -185 180 3 954 248 58 69 chr5 17024921 17025312 -182604838 - MLT1G LTR MaLR -217 338 16 429 54 0 0 chr5 17026026 17026082 -182604068 + (TG)n Simple_repeat Simple_repeat 1 56 0 451 276 0 24 chr5 17026223 17026350 -182603800 + MLT1K LTR MaLR 437 560 -28 703 276 112 53 chr5 17027316 17027402 -182602748 - HAL1 LINE L1 -127 2380 2300 2056 126 10 7 chr5 17027402 17027711 -182602439 - AluSx SINE Alu -2 310 1 703 276 112 53 chr5 17027711 17028168 -182601982 - HAL1 LINE L1 -207 2300 1805 1440 124 179 19 chr5 17028310 17028425 -182601725 - AluSg1 SINE Alu -11 298 203 2487 99 8 6 chr5 17028425 17028779 -182601371 - THE1A LTR MaLR 0 355 1 11621 105 5 1 chr5 17028779 17030352 -182599798 - THE1A-int LTR MaLR 0 1580 1 2485 107 8 8 chr5 17030352 17030707 -182599443 - THE1A LTR MaLR 0 355 1 1440 124 179 19 chr5 17030707 17030846 -182599304 - AluSg1 SINE Alu -105 204 1 259 301 21 11 chr5 17031095 17031188 -182598962 + MIR SINE MIR 31 124 -138 181 261 23 68 chr5 17031429 17031517 -182598633 - MIR SINE MIR -1 261 178 2072 140 10 0 chr5 17031531 17031962 -182598188 - AluSx SINE Alu 0 434 1 454 222 90 35 chr5 17032008 17032152 -182597998 + MIR SINE MIR 111 262 0 196 261 0 0 chr5 17032519 17032565 -182597585 + L2 LINE L2 3256 3301 -12 1489 78 74 18 chr5 17032787 17033004 -182597146 - MER30 DNA MER1_type -1 229 1 296 198 209 11 chr5 17033213 17033304 -182596846 - L2 LINE L2 0 3313 3205 1987 159 0 3 chr5 17033767 17034068 -182596082 + AluJb SINE Alu 1 300 -12 707 228 7 0 chr5 17034641 17034790 -182595360 + MER58B DNA MER1_type 7 156 -185 1019 168 0 6 chr5 17034792 17034953 -182595197 + FRAM SINE Alu 1 155 -21 715 207 14 21 chr5 17035028 17035173 -182594977 + MER58B DNA MER1_type 196 339 -2 316 268 109 7 chr5 17035369 17035507 -182594643 - L1ME4a LINE L1 -39 6082 5931 455 274 91 32 chr5 17035560 17035746 -182594404 - MLT1K LTR MaLR -111 477 281 1857 190 16 38 chr5 17035780 17036153 -182593997 - MLT1A1 LTR MaLR 0 365 1 345 329 20 13 chr5 17036259 17036408 -182593742 - MIR3 SINE MIR -2 206 57 650 229 0 0 chr5 17036542 17036673 -182593477 + FLAM_A SINE Alu 2 132 -1 2449 91 3 0 chr5 17036675 17036984 -182593166 + AluY SINE Alu 1 310 -1 193 308 145 38 chr5 17037463 17037578 -182592572 - L2 LINE L2 -2 3270 3132 2203 117 0 13 chr5 17037578 17037887 -182592263 - AluSx SINE Alu -7 305 1 193 308 145 38 chr5 17037887 17037930 -182592220 - L2 LINE L2 -140 3132 3095 21 0 0 0 chr5 17038499 17038520 -182591630 + AT_rich Low_complexity Low_complexity 1 21 0 349 125 0 0 chr5 17038533 17038589 -182591561 - Alu SINE Alu -1 299 244 1340 160 38 52 chr5 17038591 17038878 -182591272 - L1M3 LINE L1 -557 5623 5341 1244 184 5 9 chr5 17038881 17039104 -182591046 - AluJo SINE Alu -5 307 86 963 262 0 5 chr5 17039161 17039382 -182590768 - AluJo SINE Alu -92 220 1 458 252 31 25 chr5 17039655 17039814 -182590336 - MIR SINE MIR -55 207 48 1317 123 238 12 chr5 17039871 17040115 -182590035 - AluSg1 SINE Alu -10 299 1 6741 167 123 38 chr5 17040144 17041709 -182588441 + pTR5 LTR ERV1 741 2438 0 238 156 0 0 chr5 17042067 17042103 -182588047 + L1MB3 LINE L1 6107 6145 -38 2090 119 7 14 chr5 17042103 17042396 -182587754 + AluSx SINE Alu 1 291 -21 632 261 101 5 chr5 17042978 17043166 -182586984 - MIR SINE MIR -30 232 27 464 225 46 40 chr5 17043705 17043856 -182586294 + MIR SINE MIR 109 260 -2 23 0 0 0 chr5 17044857 17044880 -182585270 + GC_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr5 17045017 17045041 -182585109 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 2058 92 3 68 chr5 17045564 17045890 -182584260 + AluSg SINE Alu 1 305 -5 1200 231 132 21 chr5 17051607 17052059 -182578091 - MLT1J LTR MaLR -4 482 7 412 272 185 30 chr5 17052101 17052539 -182577611 - L2 LINE L2 -1 3312 2807 684 154 9 0 chr5 17052554 17052664 -182577486 + MER81 DNA DNA 3 113 -1 1926 130 35 3 chr5 17052719 17053003 -182577147 + AluSx SINE Alu 1 293 -19 217 232 147 32 chr5 17053297 17053392 -182576758 + MER5B DNA MER1_type 7 112 -66 268 247 78 0 chr5 17053434 17053511 -182576639 - MER5A DNA MER1_type -106 83 1 270 288 62 0 chr5 17054194 17054274 -182575876 + L3 LINE CR1 762 846 -731 431 327 82 67 chr5 17054742 17054851 -182575299 + L3 LINE CR1 911 1017 -560 1519 219 60 0 chr5 17054851 17055170 -182574980 + MER58B DNA MER1_type 4 341 0 431 327 82 67 chr5 17055170 17055390 -182574760 + L3 LINE CR1 1017 1245 -332 224 298 0 0 chr5 17055742 17055799 -182574351 + L3 LINE CR1 1254 1310 -267 240 306 114 42 chr5 17055862 17056222 -182573928 + L2 LINE L2 2885 3270 -2 199 295 98 0 chr5 17056232 17056354 -182573796 + L3 LINE CR1 1363 1496 -81 243 0 0 0 chr5 17058691 17058718 -182571432 + (T)n Simple_repeat Simple_repeat 1 27 0 855 185 107 56 chr5 17059721 17060080 -182570070 - MSTC LTR MaLR 0 428 1 261 255 51 20 chr5 17060092 17060190 -182569960 + MIR SINE MIR 47 147 -115 260 324 28 19 chr5 17060211 17060319 -182569831 - MIR SINE MIR 0 262 154 247 298 48 24 chr5 17060396 17060520 -182569630 - MIR SINE MIR -105 157 31 312 297 11 0 chr5 17060526 17060617 -182569533 + MIR SINE MIR 153 244 -18 375 335 65 6 chr5 17061479 17061649 -182568501 + L1MC/D LINE L1 5578 5757 -2051 685 136 0 59 chr5 17061657 17061775 -182568375 + FRAM SINE Alu 43 153 -23 228 268 14 0 chr5 17061800 17061871 -182568279 + L1MC/D LINE L1 5788 5859 -1949 2109 125 3 3 chr5 17062257 17062554 -182567596 + AluSp SINE Alu 1 297 -16 2757 77 30 6 chr5 17063090 17063456 -182566694 + THE1C LTR MaLR 1 375 0 245 289 132 35 chr5 17063650 17063764 -182566386 - MIR SINE MIR -118 144 20 23 86 0 0 chr5 17063832 17063890 -182566260 + AT_rich Low_complexity Low_complexity 1 58 0 1745 180 10 3 chr5 17065490 17065785 -182564365 - AluJb SINE Alu -15 297 1 3597 180 85 12 chr5 17065937 17066832 -182563318 - L1ME1 LINE L1 -29 6137 5180 203 161 0 0 chr5 17066934 17066965 -182563185 + (TG)n Simple_repeat Simple_repeat 2 32 0 1443 206 4 11 chr5 17067099 17067371 -182562779 + AluJo SINE Alu 1 270 -42 291 57 0 0 chr5 17067371 17067406 -182562744 - THE1A LTR MaLR 0 355 321 * 332 80 22 0 chr5 17067394 17067448 -182562702 - THE1B LTR MaLR -300 55 1 10897 97 12 46 chr5 17067448 17069083 -182561067 - THE1B-int LTR MaLR 0 1580 1 2156 116 53 44 chr5 17069083 17069444 -182560706 - THE1B LTR MaLR 0 364 1 296 219 68 68 chr5 17069562 17069708 -182560442 - MIR SINE MIR -57 205 60 2285 102 0 3 chr5 17069996 17070291 -182559859 + AluSx SINE Alu 1 294 -18 432 330 97 0 chr5 17070909 17071115 -182559035 + MIR SINE MIR 19 244 -18 1585 197 39 28 chr5 17071266 17071622 -182558528 - MLT1A1 LTR MaLR -5 360 1 2532 30 40 0 chr5 17072671 17072967 -182557183 - AluY SINE Alu -3 308 1 261 238 0 0 chr5 17073880 17073960 -182556190 + (TA)n Simple_repeat Simple_repeat 1 80 0 2017 184 25 70 chr5 17074167 17074694 -182555456 + MLT1D LTR MaLR 1 503 -2 656 122 47 61 chr5 17075931 17075978 -182554172 - L1MB3 LINE L1 -4 6179 6133 2241 96 7 3 chr5 17075978 17076271 -182553879 - AluSq SINE Alu -19 294 1 656 122 47 61 chr5 17076271 17076371 -182553779 - L1MB3 LINE L1 -50 6133 6034 277 247 112 0 chr5 17079035 17079124 -182551026 - MER5C DNA MER1_type 0 324 226 257 164 104 15 chr5 17079136 17079203 -182550947 - MER5C DNA MER1_type -202 122 50 2143 109 6 16 chr5 17080167 17080478 -182549672 + AluSx SINE Alu 1 308 -4 2393 93 0 13 chr5 17081115 17081427 -182548723 + AluSq SINE Alu 3 310 -3 300 212 0 0 chr5 17081427 17081493 -182548657 + (TA)n Simple_repeat Simple_repeat 1 66 0 1095 106 0 0 chr5 17081562 17081704 -182548446 + AluSg/x SINE Alu 155 296 -14 2352 228 101 136 chr5 17084303 17084980 -182545170 + L1MEc LINE L1 588 1287 -5109 1841 164 13 7 chr5 17084980 17085284 -182544866 + AluJo SINE Alu 1 306 -6 2352 228 101 136 chr5 17085284 17085640 -182544510 + L1MEc LINE L1 1287 1654 -4742 841 195 0 0 chr5 17085640 17085768 -182544382 + FAM SINE Alu 41 168 -17 2352 228 101 136 chr5 17085768 17085798 -182544352 + L1MEc LINE L1 1654 1684 -4712 2041 138 6 10 chr5 17085798 17086109 -182544041 + AluSx SINE Alu 1 310 -2 2352 228 101 136 chr5 17086109 17086309 -182543841 + L1MEc LINE L1 1684 1889 -4507 2336 95 0 0 chr5 17086309 17086604 -182543546 + AluSx SINE Alu 1 295 -17 2352 228 101 136 chr5 17086604 17086699 -182543451 + L1MEc LINE L1 1889 1986 -4410 2287 101 0 23 chr5 17086699 17087005 -182543145 + AluSc SINE Alu 1 299 -10 2352 228 101 136 chr5 17087005 17087277 -182542873 + L1MEc LINE L1 1986 2288 -4108 264 200 0 0 chr5 17087416 17087476 -182542674 + (TA)n Simple_repeat Simple_repeat 1 60 0 27 29 0 0 chr5 17087784 17087818 -182542332 + AT_rich Low_complexity Low_complexity 1 34 0 243 192 104 104 chr5 17088056 17088181 -182541969 - MLT1K LTR MaLR 0 588 464 1954 167 24 0 chr5 17089995 17090324 -182539826 + L1MA9 LINE L1 5376 5712 -600 506 143 62 27 chr5 17090357 17090469 -182539681 - L1MA9 LINE L1 -30 6282 6167 2065 172 154 44 chr5 17090516 17090608 -182539542 + L1MA9 LINE L1 5681 5762 -550 345 24 0 0 chr5 17090608 17090650 -182539500 + (CA)n Simple_repeat Simple_repeat 1 42 0 2065 172 154 44 chr5 17090650 17091104 -182539046 + L1MA9 LINE L1 5762 6287 -25 4841 141 19 70 chr5 17091769 17092156 -182537994 - L1MB8 LINE L1 -6 6172 5767 1575 191 32 0 chr5 17092156 17092438 -182537712 - AluJb SINE Alu -17 295 5 4841 141 19 70 chr5 17092438 17092917 -182537233 - L1MB8 LINE L1 -411 5767 5265 2246 133 36 30 chr5 17092917 17093278 -182536872 - THE1B LTR MaLR 0 364 2 2058 117 7 7 chr5 17093278 17093559 -182536591 - AluSx SINE Alu -31 281 1 4841 141 19 70 chr5 17093559 17093713 -182536437 - L1MB8 LINE L1 -911 5267 5180 21 0 0 0 chr5 17094170 17094191 -182535959 + AT_rich Low_complexity Low_complexity 1 21 0 2012 141 7 7 chr5 17094471 17094776 -182535374 - AluJb SINE Alu -7 305 1 186 235 0 0 chr5 17095056 17095090 -182535060 + MIR SINE MIR 25 58 -150 2410 97 3 0 chr5 17095130 17095438 -182534712 - AluSx SINE Alu -3 309 1 2241 111 7 0 chr5 17095980 17096287 -182533863 + AluSc SINE Alu 1 309 0 261 342 63 9 chr5 17096346 17096457 -182533693 - L2 LINE L2 -12 3260 3144 1967 122 3 18 chr5 17096582 17096868 -182533282 + AluSx SINE Alu 30 311 -1 504 179 75 0 chr5 17097098 17097204 -182532946 + L1PA8A LINE L1 5990 6103 -28 393 226 11 21 chr5 17098207 17098300 -182531850 + L1PA8A LINE L1 6038 6150 -4 222 37 0 0 chr5 17098358 17098385 -182531765 + (CA)n Simple_repeat Simple_repeat 2 28 0 448 163 50 0 chr5 17098386 17098466 -182531684 + L2 LINE L2 3175 3258 -55 853 181 0 0 chr5 17099886 17100019 -182530131 - FLAM_C SINE Alu -10 133 1 2609 62 3 0 chr5 17100637 17100944 -182529206 - AluSp SINE Alu -5 308 1 5010 131 26 33 chr5 17100966 17101805 -182528345 - L1PB4 LINE L1 -7 6149 5317 5787 167 16 104 chr5 17103782 17104146 -182526004 - L1PB4 LINE L1 -1069 5077 4682 237 90 28 0 chr5 17104146 17104185 -182525965 - Alu SINE Alu -11 288 253 5787 167 16 104 chr5 17104185 17104203 -182525947 - L1PB4 LINE L1 -1464 4682 4664 1224 157 104 74 chr5 17104203 17104502 -182525648 - AluSg SINE Alu 0 310 3 5787 167 16 104 chr5 17104502 17104685 -182525465 - L1PB4 LINE L1 -1482 4664 4466 1761 92 4 0 chr5 17104685 17104913 -182525237 - AluY SINE Alu -1 310 82 5787 167 16 104 chr5 17104913 17105259 -182524891 - L1PB4 LINE L1 -1680 4466 4091 2297 113 3 0 chr5 17105259 17105568 -182524582 + AluSx SINE Alu 1 310 -2 5787 167 16 104 chr5 17105568 17106427 -182523723 - L1PB4 LINE L1 -2055 4091 3465 1368 54 12 6 chr5 17106427 17106595 -182523555 - L1MA1 LINE L1 -4 6298 6130 5787 167 16 104 chr5 17106595 17106663 -182523487 - L1PB4 LINE L1 -2681 3465 3393 2251 105 10 3 chr5 17106672 17106968 -182523182 - AluSq SINE Alu -15 298 1 1842 187 56 37 chr5 17106996 17107389 -182522761 + Charlie1b DNA MER1_type 50 455 -2306 2831 178 30 44 chr5 17107389 17107955 -182522195 - MER74A LTR ERVL 0 558 1 1842 187 56 37 chr5 17107955 17108026 -182522124 + Charlie1b DNA MER1_type 455 523 0 348 189 14 27 chr5 17108026 17108098 -182522052 - MLT1I LTR MaLR -16 393 323 336 233 41 0 chr5 17108870 17108943 -182521207 + MIR SINE MIR 3 78 -184 1272 122 0 94 chr5 17110236 17110491 -182519659 - AluSg/x SINE Alu -5 307 77 439 105 0 79 chr5 17110491 17110513 -182519637 - AluSg/x SINE Alu -166 144 122 189 0 0 0 chr5 17110513 17110534 -182519616 + (TA)n Simple_repeat Simple_repeat 1 21 0 439 105 0 79 chr5 17110534 17110587 -182519563 - AluSg/x SINE Alu -188 122 75 1066 57 0 0 chr5 17110625 17110747 -182519403 - AluSg SINE Alu -188 122 1 2588 48 0 16 chr5 17110770 17111083 -182519067 - AluY SINE Alu -3 308 1 442 250 110 22 chr5 17111871 17112007 -182518143 - MIR SINE MIR -37 225 78 760 204 0 58 chr5 17112144 17112295 -182517855 + MLT1A2 LTR MaLR 1 142 -232 1519 170 110 28 chr5 17112295 17112613 -182517537 - MER2 DNA MER2_type 0 344 1 760 204 0 58 chr5 17112613 17112633 -182517517 + MLT1A2 LTR MaLR 142 162 -212 1552 199 33 16 chr5 17112637 17112943 -182517207 + AluJo SINE Alu 1 311 -1 2732 161 14 6 chr5 17112946 17113438 -182516712 + L1MA4 LINE L1 4701 5196 -950 1011 153 153 5 chr5 17113438 17113686 -182516464 + AluJo SINE Alu 73 350 0 2547 139 83 14 chr5 17113689 17114185 -182515965 + L1MA4 LINE L1 5769 6298 -2 1156 209 304 9 chr5 17116090 17116322 -182513828 - Charlie2 DNA MER1_type -290 2572 2410 1621 169 24 0 chr5 17116322 17116570 -182513580 + AluJo SINE Alu 1 254 -58 1156 209 304 9 chr5 17116570 17116910 -182513240 - Charlie2 DNA MER1_type -452 2410 1831 641 245 121 109 chr5 17116952 17117361 -182512789 - Charlie2b DNA MER1_type -2099 683 265 1216 181 67 38 chr5 17117361 17117524 -182512626 - MER33 DNA MER1_type -2261 324 167 1973 149 7 0 chr5 17117524 17117812 -182512338 + AluJb SINE Alu 1 290 -22 1216 181 67 38 chr5 17117812 17117963 -182512187 - MER33 DNA MER1_type -2418 167 1 641 245 121 109 chr5 17117963 17118092 -182512058 - Charlie2b DNA MER1_type -2517 265 139 3311 84 8 61 chr5 17118429 17118907 -182511243 - MLT2A2 LTR ERVL 0 453 1 1415 165 59 87 chr5 17119198 17119555 -182510595 - MLT1A2 LTR MaLR -27 347 1 1026 57 0 0 chr5 17119983 17120106 -182510044 + L1PA8 LINE L1 6050 6172 0 2197 115 0 34 chr5 17120855 17121176 -182508974 + AluSx SINE Alu 1 310 -2 326 186 302 25 chr5 17121255 17121390 -182508760 - Charlie7 DNA MER1_type -35 2577 2481 2200 109 0 7 chr5 17121390 17121684 -182508466 - AluSx SINE Alu -14 298 7 326 186 302 25 chr5 17121684 17121790 -182508360 - Charlie7 DNA MER1_type -131 2481 2269 1783 172 10 0 chr5 17121791 17122082 -182508068 - AluSx SINE Alu -14 298 5 2584 140 45 51 chr5 17122109 17122243 -182507907 - L1MC3 LINE L1 -6 7779 7646 1969 131 10 10 chr5 17122243 17122533 -182507617 - AluJb SINE Alu -11 301 12 2584 140 45 51 chr5 17122533 17122911 -182507239 - L1MC3 LINE L1 -139 7646 7270 1469 203 25 69 chr5 17122911 17123105 -182507045 - ERVL LTR ERVL -2346 3418 3242 1294 176 80 83 chr5 17123105 17123394 -182506756 - AluJo SINE Alu -14 288 1 1469 203 25 69 chr5 17123394 17123519 -182506631 - ERVL LTR ERVL -2522 3242 3113 6072 223 64 12 chr5 17123548 17124331 -182505819 - ERVL LTR ERVL -2769 2995 2254 2177 91 0 49 chr5 17124331 17124639 -182505511 - AluSg SINE Alu -17 293 1 6072 223 64 12 chr5 17124639 17125496 -182504654 - ERVL LTR ERVL -3510 2254 1205 792 158 16 8 chr5 17125501 17125628 -182504522 + ERVL LTR ERVL 2065 2192 -3572 443 252 39 31 chr5 17125625 17125752 -182504398 - ERVL LTR ERVL -4509 1171 1018 * 1710 234 55 7 chr5 17125752 17126192 -182503958 - MLT1C LTR MaLR 0 467 7 295 271 181 65 chr5 17126346 17126671 -182503479 + L2 LINE L2 2599 2961 -353 23 97 0 0 chr5 17127583 17127655 -182502495 + GC_rich Low_complexity Low_complexity 1 72 0 30 27 0 0 chr5 17127683 17127720 -182502430 + GC_rich Low_complexity Low_complexity 1 37 0 329 135 19 0 chr5 17128652 17128704 -182501446 - MSTB LTR MaLR -373 53 1 1781 163 7 7 chr5 17130078 17130372 -182499778 - AluJo SINE Alu -16 296 3 2254 101 0 3 chr5 17131781 17132077 -182498073 + AluSq SINE Alu 1 295 -18 1716 181 7 3 chr5 17132189 17132476 -182497674 + AluJo SINE Alu 1 288 -24 1497 103 48 44 chr5 17132514 17132766 -182497384 - L1MA5A LINE L1 -24 6273 6021 22 35 0 0 chr5 17133070 17133099 -182497051 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr5 17133120 17133148 -182497002 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 17133286 17133309 -182496841 + AT_rich Low_complexity Low_complexity 1 23 0 1202 192 4 4 chr5 17133313 17133542 -182496608 - AluJo SINE Alu -21 291 63 317 212 40 71 chr5 17134017 17134116 -182496034 - MIR3 SINE MIR -23 185 90 335 318 52 57 chr5 17134562 17134773 -182495377 - MIR SINE MIR -45 217 8 313 262 124 34 chr5 17135245 17135512 -182494638 - HAL1 LINE L1 -2060 447 157 2017 102 56 22 chr5 17137127 17137173 -182492977 - HSMAR2 DNA Mariner -2 1300 1257 1927 159 10 0 chr5 17137173 17137475 -182492675 + AluJo SINE Alu 1 305 -7 2017 102 56 22 chr5 17137475 17137752 -182492398 - HSMAR2 DNA Mariner -45 1257 966 1511 101 5 0 chr5 17137745 17137963 -182492187 - HSMAR2 DNA Mariner -1081 221 3 * 873 232 71 5 chr5 17138567 17138765 -182491385 + MER58A DNA MER1_type 4 214 -10 317 304 18 9 chr5 17138789 17138901 -182491249 - L1MEd LINE L1 -5771 348 236 242 235 136 25 chr5 17139032 17139113 -182491037 + L2 LINE L2 3151 3240 -32 22 0 0 0 chr5 17139825 17139847 -182490303 + AT_rich Low_complexity Low_complexity 1 22 0 444 283 66 33 chr5 17139847 17140059 -182490091 + L2 LINE L2 3046 3264 -8 342 283 143 59 chr5 17140611 17141254 -182488896 - L2 LINE L2 -5 3308 2566 219 238 16 0 chr5 17142047 17142110 -182488040 + L2 LINE L2 2484 2547 -767 23 33 0 0 chr5 17142326 17142356 -182487794 + AT_rich Low_complexity Low_complexity 1 30 0 2257 99 0 3 chr5 17143476 17143770 -182486380 + AluSq SINE Alu 1 293 -20 442 81 0 54 chr5 17144965 17145039 -182485111 + L1PA16 LINE L1 6097 6166 0 1100 90 6 6 chr5 17145039 17145195 -182484955 + Tigger1 DNA MER2_type 2083 2238 -180 293 315 38 56 chr5 17145199 17145412 -182484738 + L3 LINE CR1 787 995 -582 191 0 103 0 chr5 17145412 17145441 -182484709 + T-rich Low_complexity Low_complexity 2 33 0 310 254 169 14 chr5 17145615 17145757 -182484393 + L3 LINE CR1 1181 1344 -233 649 137 36 86 chr5 17145836 17145975 -182484175 + FLAM_A SINE Alu 1 132 -1 228 225 0 0 chr5 17146281 17146321 -182483829 + Alu SINE Alu 145 184 -119 25 31 0 0 chr5 17148949 17148981 -182481169 + AT_rich Low_complexity Low_complexity 1 32 0 1186 176 0 38 chr5 17149004 17149214 -182480936 - AluJo SINE Alu -18 294 93 348 278 95 16 chr5 17151130 17151256 -182478894 + L2 LINE L2 3136 3271 -1 375 249 120 49 chr5 17151667 17151892 -182478258 - MIR SINE MIR 0 262 22 2619 189 51 2 chr5 17153031 17153543 -182476607 - MLT1F1 LTR MaLR -29 538 2 3066 158 58 75 chr5 17154369 17155361 -182474789 - L1MB8 LINE L1 -81 6089 5234 23 0 0 0 chr5 17155379 17155402 -182474748 + AT_rich Low_complexity Low_complexity 1 23 0 327 167 0 0 chr5 17156188 17156242 -182473908 - tRNA-Met-e tRNA tRNA -21 54 1 24 0 0 0 chr5 17157957 17157981 -182472169 + AT_rich Low_complexity Low_complexity 1 24 0 219 139 0 0 chr5 17159746 17159782 -182470368 + (TG)n Simple_repeat Simple_repeat 2 37 0 2194 115 3 0 chr5 17159889 17160176 -182469974 - AluSx SINE Alu -24 288 1 182 298 32 53 chr5 17161587 17161681 -182468469 + MIR SINE MIR 46 137 -125 283 252 184 27 chr5 17162717 17162864 -182467286 - L1MC/D LINE L1 -2322 5486 5317 288 294 0 33 chr5 17163219 17163399 -182466751 + C-rich Low_complexity Low_complexity 4 177 0 241 286 14 0 chr5 17164623 17164693 -182465457 - MER91 DNA MER1_type -3 137 67 191 256 22 89 chr5 17165008 17165098 -182465052 - L2 LINE L2 -1005 2309 2226 351 0 0 0 chr5 17166024 17166063 -182464087 + (A)n Simple_repeat Simple_repeat 1 39 0 2485 75 0 3 chr5 17166749 17167055 -182463095 + AluSc SINE Alu 1 305 -4 835 160 0 0 chr5 17167727 17167858 -182462292 - FLAM_A SINE Alu -2 131 1 314 215 37 37 chr5 17168081 17168188 -182461962 - MIR3 SINE MIR -1 207 101 2243 117 0 3 chr5 17171595 17171893 -182458257 - AluSq SINE Alu -16 297 1 27 29 0 0 chr5 17172596 17172630 -182457520 + AT_rich Low_complexity Low_complexity 1 34 0 622 302 253 12 chr5 17174307 17175472 -182454678 + L2 LINE L2 463 1908 -1406 2304 99 7 3 chr5 17177828 17178130 -182452020 - AluSq SINE Alu -10 303 1 312 316 37 15 chr5 17178725 17178861 -182451289 - L1ME1 LINE L1 -18 6148 6010 1907 122 37 0 chr5 17178920 17179218 -182450932 + AluSx SINE Alu 2 309 0 2847 245 165 76 chr5 17180050 17180409 -182449741 + HAL1 LINE L1 117 443 -2064 1437 158 8 0 chr5 17180409 17180643 -182449507 - MER46A DNA MER2_type 0 236 1 2847 245 165 76 chr5 17180643 17181229 -182448921 + HAL1 LINE L1 443 975 -1532 2032 104 3 31 chr5 17181229 17181517 -182448633 + AluSp SINE Alu 2 281 -32 2847 245 165 76 chr5 17181517 17182384 -182447766 + HAL1 LINE L1 975 2092 -415 2469 56 3 0 chr5 17184349 17184654 -182445496 + AluY SINE Alu 1 306 -5 3804 216 92 20 chr5 17185071 17186071 -182444079 + L1MC3 LINE L1 6702 7773 -12 1371 166 109 7 chr5 17186082 17186365 -182443785 + AluJo SINE Alu 1 312 0 2047 130 3 0 chr5 17186737 17187038 -182443112 + AluSp SINE Alu 3 304 -9 245 310 82 6 chr5 17187833 17187991 -182442159 + MIR SINE MIR 16 185 -77 181 244 67 0 chr5 17188002 17188047 -182442103 + MER5C DNA MER1_type 31 78 -246 337 191 148 26 chr5 17188333 17188448 -182441702 + L1ME4a LINE L1 5990 6118 -3 1516 91 0 0 chr5 17188450 17188648 -182441502 - AluSc SINE Alu -16 293 96 290 287 30 0 chr5 17189016 17189117 -182441033 - L2 LINE L2 -491 2823 2720 561 204 116 33 chr5 17190400 17190581 -182439569 + L1MB2 LINE L1 5976 6171 0 389 255 161 21 chr5 17190850 17191042 -182439108 - MIR SINE MIR -23 239 21 2140 89 10 0 chr5 17191755 17192048 -182438102 - AluSx SINE Alu -12 300 5 991 81 7 0 chr5 17192050 17192186 -182437964 - AluSq/x SINE Alu -175 137 1 480 363 11 6 chr5 17195371 17195553 -182434597 - MIR SINE MIR -74 188 6 1782 154 173 23 chr5 17196784 17197210 -182432940 + LTR10A LTR ERV1 13 548 -61 458 100 0 0 chr5 17197891 17197961 -182432189 + L1MA3 LINE L1 6236 6305 0 1549 195 160 15 chr5 17198196 17198602 -182431548 - MLT1C LTR MaLR -2 465 1 288 0 0 0 chr5 17198706 17198738 -182431412 + (T)n Simple_repeat Simple_repeat 1 32 0 205 228 11 54 chr5 17199323 17199415 -182430735 + CT-rich Low_complexity Low_complexity 2 89 0 272 254 0 0 chr5 17199439 17199494 -182430656 + MER91A DNA MER1_type 1 55 -141 531 132 211 44 chr5 17201346 17201460 -182428690 + FLAM_C SINE Alu 1 133 0 215 360 81 0 chr5 17201639 17201750 -182428400 - L2 LINE L2 -21 3251 3132 2223 112 0 0 chr5 17201834 17202139 -182428011 + AluSx SINE Alu 1 305 -7 301 222 148 64 chr5 17202370 17202555 -182427595 + MIR3 SINE MIR 14 202 -6 180 176 0 0 chr5 17208986 17209020 -182421130 + CT-rich Low_complexity Low_complexity 2 35 0 3654 63 21 7 chr5 17209027 17209541 -182420609 - LTR8 LTR ERV1 -104 587 1 570 79 40 0 chr5 17209541 17209617 -182420533 - HUERS-P1 LTR ERV1 0 6263 6185 204 238 32 32 chr5 17209620 17209683 -182420467 - MIR SINE MIR -196 66 4 1506 147 77 25 chr5 17209997 17210282 -182419868 + AluJo SINE Alu 1 300 -12 286 337 151 35 chr5 17210514 17210713 -182419437 + MIR SINE MIR 34 255 -7 406 310 70 0 chr5 17211532 17211661 -182418489 + MIR3 SINE MIR 24 161 -47 182 234 43 0 chr5 17213063 17213110 -182417040 + L2 LINE L2 2995 3043 -229 1543 190 7 7 chr5 17214725 17215015 -182415135 + AluJo SINE Alu 1 290 -22 549 336 184 16 chr5 17215452 17215958 -182414192 - L2 LINE L2 -1366 1948 1358 216 0 0 0 chr5 17216495 17216519 -182413631 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2014 109 53 0 chr5 17217493 17217778 -182412372 + AluSq SINE Alu 1 300 -13 234 271 57 0 chr5 17217789 17217859 -182412291 - L3 LINE CR1 -23 1554 1481 226 79 53 0 chr5 17218390 17218428 -182411722 - L2 LINE L2 -2 3311 3272 35 0 0 0 chr5 17220113 17220148 -182410002 + AT_rich Low_complexity Low_complexity 1 35 0 3169 186 55 2 chr5 17220513 17221146 -182409004 + L1MB3 LINE L1 5517 6183 0 286 331 8 8 chr5 17221670 17221803 -182408347 - L1ME LINE L1 -355 5766 5634 184 245 61 0 chr5 17221968 17222017 -182408133 + L2 LINE L2 3221 3272 0 1807 164 3 22 chr5 17222167 17222479 -182407671 + AluJo SINE Alu 1 306 -6 540 176 0 0 chr5 17222480 17222582 -182407568 + GA-rich Low_complexity Low_complexity 5 106 0 2646 172 15 13 chr5 17223555 17224021 -182406129 + MLT1C LTR MaLR 1 467 0 773 238 144 61 chr5 17224181 17224462 -182405688 + LTR56 LTR ERV1 1 328 -117 2188 100 3 7 chr5 17224462 17224763 -182405387 - AluSx SINE Alu -12 300 1 773 238 144 61 chr5 17224763 17224892 -182405258 + LTR56 LTR ERV1 328 445 0 193 343 82 0 chr5 17226078 17226151 -182403999 - L2 LINE L2 -9 3263 3185 1947 120 40 0 chr5 17226507 17226807 -182403343 + AluSx SINE Alu 1 312 0 1743 249 55 38 chr5 17226812 17227339 -182402811 + MLT1H LTR MaLR 1 536 -13 1740 170 0 14 chr5 17228810 17229122 -182401028 + AluJo SINE Alu 1 308 0 29 28 0 0 chr5 17230187 17230223 -182399927 + AT_rich Low_complexity Low_complexity 1 36 0 186 103 0 0 chr5 17232325 17232354 -182397796 + (TG)n Simple_repeat Simple_repeat 1 29 0 1097 138 20 26 chr5 17232836 17233031 -182397119 - L1MC1 LINE L1 0 6333 6140 1691 90 65 29 chr5 17233033 17233312 -182396838 - Tigger7 DNA MER2_type 0 2487 2199 996 207 6 0 chr5 17233301 17233475 -182396675 - Tigger7 DNA MER2_type -530 175 1 * 481 130 0 26 chr5 17233480 17233557 -182396593 - L1MC1 LINE L1 -194 6139 6065 610 91 0 0 chr5 17233982 17234059 -182396091 + LTR32 LTR ERVL 12 88 -383 272 170 0 57 chr5 17234039 17234092 -182396058 + LTR32 LTR ERVL 15 64 -407 * 1153 132 21 32 chr5 17234106 17234295 -182395855 + LTR32 LTR ERVL 285 471 0 2195 125 23 0 chr5 17234339 17234644 -182395506 + AluSx SINE Alu 1 312 0 377 186 35 71 chr5 17234661 17234774 -182395376 - MER104 DNA Tc2 -66 114 6 929 246 56 59 chr5 17235427 17235818 -182394332 + LTR16A1 LTR ERVL 1 390 -67 231 36 0 0 chr5 17236051 17236079 -182394071 + (T)n Simple_repeat Simple_repeat 1 28 0 273 316 11 11 chr5 17236271 17236366 -182393784 + MIR SINE MIR 20 114 -148 291 226 69 29 chr5 17236441 17236543 -182393607 + L2 LINE L2 3208 3313 0 1166 118 0 0 chr5 17237145 17237306 -182392844 - AluSg/x SINE Alu -19 291 131 434 210 67 80 chr5 17237348 17237572 -182392578 + L2 LINE L2 3092 3312 -1 1755 108 82 38 chr5 17237643 17237758 -182392392 - MER44D DNA MER2_type -1891 600 492 1543 144 4 61 chr5 17237758 17238036 -182392114 - AluJo SINE Alu -14 298 37 1755 108 82 38 chr5 17238036 17238235 -182391915 - MER44D DNA MER2_type -1999 492 2 298 238 245 0 chr5 17238275 17238418 -182391732 - L2 LINE L2 -254 3059 2882 828 310 28 22 chr5 17238830 17239194 -182390956 - L2 LINE L2 -825 2489 2124 2238 112 0 10 chr5 17239700 17240012 -182390138 + AluSq SINE Alu 1 309 -4 280 324 120 13 chr5 17241106 17241489 -182388661 + L2 LINE L2 685 1108 -2206 228 371 21 14 chr5 17242172 17242315 -182387835 + L2 LINE L2 3122 3265 -7 2202 125 7 0 chr5 17242961 17243264 -182386886 + AluSx SINE Alu 1 305 -7 482 272 161 27 chr5 17244943 17245167 -182384983 - MIR SINE MIR -6 256 3 392 0 21 0 chr5 17245990 17246038 -182384112 + (CA)n Simple_repeat Simple_repeat 2 50 0 203 333 23 0 chr5 17246916 17247003 -182383147 - MIR SINE MIR -86 176 88 2479 139 45 17 chr5 17247923 17248327 -182381823 + MSTB LTR MaLR 1 415 -11 2198 98 30 7 chr5 17248473 17248769 -182381381 + AluSg SINE Alu 1 303 -7 334 340 6 19 chr5 17248947 17249109 -182381041 + L1ME4a LINE L1 4456 4615 -1531 501 293 84 73 chr5 17249274 17249732 -182380418 + L1ME4a LINE L1 5374 5844 -277 2438 93 0 0 chr5 17249732 17250033 -182380117 + AluSx SINE Alu 1 301 -11 501 293 84 73 chr5 17250033 17250221 -182379929 + L1ME4a LINE L1 5844 6028 -93 2227 101 3 3 chr5 17251646 17251934 -182378216 + AluSx SINE Alu 1 288 -24 1921 133 7 0 chr5 17252431 17252709 -182377441 - AluSx SINE Alu -32 280 1 1880 148 0 7 chr5 17253331 17253609 -182376541 - AluSx SINE Alu -36 276 1 229 356 28 34 chr5 17253639 17253816 -182376334 - MIR SINE MIR -30 232 57 191 244 0 0 chr5 17254571 17254612 -182375538 - L2 LINE L2 -19 3253 3213 2228 95 0 7 chr5 17255392 17255675 -182374475 + AluSq SINE Alu 1 281 -32 742 106 7 7 chr5 17255675 17255826 -182374324 + (TA)n Simple_repeat Simple_repeat 2 152 0 2012 128 3 33 chr5 17258266 17258571 -182371579 + AluSx SINE Alu 1 296 -16 15377 121 22 10 chr5 17261204 17263418 -182366732 + Tigger1 DNA MER2_type 58 2302 -116 1938 166 7 3 chr5 17263418 17263725 -182366425 - AluJo SINE Alu -4 308 1 15377 121 22 10 chr5 17263725 17263843 -182366307 + Tigger1 DNA MER2_type 2302 2417 -1 242 299 174 12 chr5 17264521 17264688 -182365462 - MER112 DNA MER1_type -35 225 32 319 349 105 33 chr5 17264779 17265330 -182364820 + L2 LINE L2 2242 2832 -482 258 143 0 0 chr5 17265572 17265614 -182364536 + L2 LINE L2 3265 3306 -7 299 235 53 46 chr5 17265717 17265894 -182364256 - MER112 DNA MER1_type 0 260 2 2133 144 0 6 chr5 17265966 17266279 -182363871 - AluSx SINE Alu -1 311 1 2318 96 0 0 chr5 17266602 17266895 -182363255 - AluSq SINE Alu -20 293 1 232 219 14 41 chr5 17266898 17266971 -182363179 - MIR SINE MIR -116 146 76 1326 77 6 0 chr5 17267687 17267856 -182362294 + MLT2A1 LTR ERVL 1 170 -274 203 333 23 0 chr5 17268469 17268556 -182361594 - MIR SINE MIR -86 176 88 2479 139 45 17 chr5 17269476 17269880 -182360270 + MSTB LTR MaLR 1 415 -11 2198 98 30 7 chr5 17270026 17270322 -182359828 + AluSg SINE Alu 1 303 -7 334 340 6 19 chr5 17270500 17270662 -182359488 + L1ME4a LINE L1 4456 4615 -1531 504 293 84 73 chr5 17270828 17271286 -182358864 + L1ME4a LINE L1 5374 5844 -277 2427 96 0 0 chr5 17271286 17271587 -182358563 + AluSx SINE Alu 1 301 -11 504 293 84 73 chr5 17271587 17271775 -182358375 + L1ME4a LINE L1 5844 6028 -93 2082 113 17 7 chr5 17273202 17273502 -182356648 + AluSx SINE Alu 1 303 -9 2049 113 14 0 chr5 17274341 17274616 -182355534 + AluSx SINE Alu 1 279 -33 391 0 0 0 chr5 17274616 17274658 -182355492 + LTR17 LTR ERV1 1 42 -738 2040 98 4 4 chr5 17274819 17275083 -182355067 - AluSq SINE Alu -49 264 1 329 193 211 26 chr5 17275452 17275566 -182354584 - AluJo SINE Alu -163 139 5 258 213 7 37 chr5 17275956 17276092 -182354058 + CT-rich Low_complexity Low_complexity 1 132 0 398 136 53 24 chr5 17276114 17276283 -182353867 + CT-rich Low_complexity Low_complexity 2 175 0 193 232 33 20 chr5 17276259 17276410 -182353740 + T-rich Low_complexity Low_complexity 5 157 0 * 372 73 0 18 chr5 17276474 17276529 -182353621 + MLT2A2 LTR ERVL 400 453 0 2194 132 0 0 chr5 17278055 17278358 -182351792 - AluSx SINE Alu -7 305 3 382 196 131 65 chr5 17279046 17279199 -182350951 - L1ME4a LINE L1 -3 6118 5956 900 97 0 0 chr5 17279428 17279542 -182350608 + AluJb SINE Alu 1 114 -198 6771 11 0 1 chr5 17279544 17280294 -182349856 + L1HS LINE L1 5407 6155 0 207 188 0 0 chr5 17280294 17280342 -182349808 + A-rich Low_complexity Low_complexity 1 48 0 892 170 31 6 chr5 17280343 17280502 -182349648 + AluJb SINE Alu 122 284 -28 2261 97 3 7 chr5 17281106 17281404 -182348746 - AluSq SINE Alu -16 297 1 216 67 0 0 chr5 17283063 17283093 -182347057 + (A)n Simple_repeat Simple_repeat 1 30 0 1020 113 113 87 chr5 17283463 17283693 -182346457 + MER31B LTR ERV1 1 236 -230 349 130 0 43 chr5 17283678 17283747 -182346403 + MER31B LTR ERV1 401 466 0 * 1593 187 0 4 chr5 17283936 17284198 -182345952 + AluJo SINE Alu 33 293 -19 217 245 235 20 chr5 17285161 17285259 -182344891 + L2 LINE L2 3137 3255 -17 1801 150 14 31 chr5 17285264 17285557 -182344593 + AluJo SINE Alu 1 288 -24 202 260 91 26 chr5 17287192 17287269 -182342881 + MIR3 SINE MIR 89 170 -38 21 0 0 0 chr5 17287916 17287937 -182342213 + AT_rich Low_complexity Low_complexity 1 21 0 1380 142 0 39 chr5 17288813 17289046 -182341104 + AluSg/x SINE Alu 86 309 0 2442 90 0 10 chr5 17289310 17289621 -182340529 + AluSq SINE Alu 1 308 -5 1736 181 0 0 chr5 17290535 17290846 -182339304 + AluJb SINE Alu 1 311 0 351 0 0 0 chr5 17290852 17290891 -182339259 + (CA)n Simple_repeat Simple_repeat 2 40 0 1788 156 125 51 chr5 17291304 17291735 -182338415 - MER31B LTR ERV1 -3 463 1 1790 158 10 10 chr5 17291767 17292064 -182338086 + AluJb SINE Alu 1 297 -15 1232 160 78 3 chr5 17293052 17293346 -182336804 + MER33 DNA MER1_type 5 320 -4 2324 60 42 0 chr5 17293715 17293998 -182336152 + AluY SINE Alu 1 295 -16 2189 124 0 10 chr5 17294595 17294902 -182335248 + AluSx SINE Alu 1 304 -8 2146 144 0 3 chr5 17296298 17296604 -182333546 - AluJb SINE Alu -7 305 1 328 242 11 22 chr5 17297420 17297511 -182332639 + MIR SINE MIR 108 197 -65 665 217 104 64 chr5 17297775 17298024 -182332126 + MLT1J2 LTR MaLR 21 279 -171 445 284 83 54 chr5 17298178 17298382 -182331768 - MIR SINE MIR -41 221 12 1251 163 75 3 chr5 17299556 17299851 -182330299 + MER33 DNA MER1_type 5 320 -4 2284 63 42 3 chr5 17300220 17300506 -182329644 + AluY SINE Alu 1 297 -14 411 38 0 0 chr5 17301807 17301860 -182328290 + (TG)n Simple_repeat Simple_repeat 1 53 0 437 213 46 0 chr5 17302142 17302250 -182327900 - MER81 DNA DNA -1 113 1 483 279 82 0 chr5 17305436 17305583 -182324567 + MIR SINE MIR 13 171 -91 2217 107 7 7 chr5 17305800 17306098 -182324052 + AluSx SINE Alu 1 298 -14 452 250 14 21 chr5 17306121 17306265 -182323885 + MIR SINE MIR 114 256 -6 15320 39 12 0 chr5 17306979 17309573 -182320577 + L1PA5 LINE L1 3552 6151 -3 947 55 0 23 chr5 17309574 17309702 -182320448 + L1PA4 LINE L1 6031 6155 0 29 28 0 0 chr5 17309702 17309738 -182320412 + AT_rich Low_complexity Low_complexity 1 36 0 1782 175 14 20 chr5 17312553 17312596 -182317554 - L1MB3 LINE L1 0 6183 6141 2178 137 0 0 chr5 17312596 17312896 -182317254 - AluSx SINE Alu -11 301 2 1782 175 14 20 chr5 17312896 17313207 -182316943 - L1MB3 LINE L1 -42 6141 5831 2092 151 3 0 chr5 17314471 17314776 -182315374 - AluSx SINE Alu -6 306 1 180 0 0 0 chr5 17314850 17314870 -182315280 + (A)n Simple_repeat Simple_repeat 1 20 0 30 0 0 0 chr5 17316649 17316679 -182313471 + AT_rich Low_complexity Low_complexity 1 30 0 2447 89 0 10 chr5 17317144 17317457 -182312693 - AluSq SINE Alu -3 310 1 1894 144 6 51 chr5 17318010 17318323 -182311827 + AluSx SINE Alu 1 299 -13 2035 116 14 0 chr5 17319161 17319436 -182310714 + AluSx SINE Alu 1 279 -33 4971 92 10 34 chr5 17319436 17320162 -182309988 + LTR17 LTR ERV1 1 708 -72 1285 77 0 12 chr5 17320244 17320414 -182309736 - LTR17 LTR ERV1 -612 168 1 1930 168 7 0 chr5 17323300 17323598 -182306552 + AluJo SINE Alu 1 300 -12 577 109 0 20 chr5 17323818 17323919 -182306231 - L1PA13 LINE L1 -5 6158 6060 1953 163 0 3 chr5 17324594 17324889 -182305261 + AluJb SINE Alu 1 294 -18 435 110 0 0 chr5 17324958 17325031 -182305119 - AluSp/q SINE Alu -6 307 235 1665 131 55 70 chr5 17325698 17326010 -182304140 + AluJo SINE Alu 1 307 -5 206 360 93 22 chr5 17326099 17326421 -182303729 + L2 LINE L2 2560 2904 -410 288 310 108 8 chr5 17326597 17326726 -182303424 + L2 LINE L2 3172 3313 0 228 67 0 0 chr5 17327131 17327161 -182302989 + (A)n Simple_repeat Simple_repeat 1 30 0 607 128 4 25 chr5 17327333 17327570 -182302580 + AluJ SINE Alu 1 312 0 263 247 104 0 chr5 17327712 17327789 -182302361 - MIR SINE MIR -113 149 65 2266 105 16 10 chr5 17328673 17328977 -182301173 + AluSq SINE Alu 2 307 -6 390 245 93 0 chr5 17329257 17329396 -182300754 + L1ME2 LINE L1 5648 5799 -322 1200 108 154 0 chr5 17329445 17329640 -182300510 - L1PB2 LINE L1 -2 6149 5925 2052 123 0 3 chr5 17329735 17330072 -182300078 + AluSg SINE Alu 2 310 0 1928 177 67 10 chr5 17330310 17330700 -182299450 - L1MB4 LINE L1 0 6180 5769 604 181 78 42 chr5 17330944 17331110 -182299040 + L1ME2 LINE L1 5963 6134 -30 2018 102 15 74 chr5 17332052 17332377 -182297773 - AluSx SINE Alu -6 306 1 2203 120 7 0 chr5 17333253 17333553 -182296597 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr5 17334513 17334534 -182295616 + AT_rich Low_complexity Low_complexity 1 21 0 1744 177 10 0 chr5 17335232 17335531 -182294619 + AluJo SINE Alu 1 302 -10 209 316 10 20 chr5 17336148 17336246 -182293904 + (CATA)n Simple_repeat Simple_repeat 4 100 0 * 363 252 114 76 chr5 17336235 17336278 -182293872 + L1ME4a LINE L1 5902 5942 -179 2317 87 3 0 chr5 17336278 17336566 -182293584 + AluSp SINE Alu 1 289 -24 31 26 0 0 chr5 17336566 17336604 -182293546 + AT_rich Low_complexity Low_complexity 1 38 0 363 252 114 76 chr5 17336604 17336732 -182293418 + L1ME4a LINE L1 5941 6119 -2 1809 84 4 0 chr5 17337365 17337604 -182292546 - AluSq SINE Alu -72 241 2 1801 132 55 0 chr5 17338189 17338478 -182291672 + AluJb SINE Alu 1 305 -7 331 240 0 37 chr5 17338571 17338717 -182291433 + MIR SINE MIR 49 260 -2 2384 15 0 0 chr5 17338854 17339122 -182291028 - AluYb8 SINE Alu -14 304 37 1830 124 3 58 chr5 17339678 17340008 -182290142 - AluSx SINE Alu 0 312 1 651 79 0 264 chr5 17340008 17340186 -182289964 - AluJo/FLAM SINE Alu -171 131 1 336 175 0 0 chr5 17342058 17342121 -182288029 + A-rich Low_complexity Low_complexity 1 63 0 33 80 0 0 chr5 17342818 17342893 -182287257 + GC_rich Low_complexity Low_complexity 1 75 0 198 0 0 0 chr5 17343200 17343222 -182286928 + (CCG)n Simple_repeat Simple_repeat 2 23 0 203 213 27 40 chr5 17343232 17343307 -182286843 + G-rich Low_complexity Low_complexity 1 74 0 31 107 0 0 chr5 17343344 17343466 -182286684 + GC_rich Low_complexity Low_complexity 1 122 0 705 179 179 0 chr5 17344270 17344421 -182285729 + MER45A DNA AcHobo 1 178 0 837 132 62 7 chr5 17344645 17344810 -182285340 + AluY SINE Alu 136 308 0 26 30 0 0 chr5 17345625 17345658 -182284492 + AT_rich Low_complexity Low_complexity 1 33 0 182 36 0 36 chr5 17346138 17346166 -182283984 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1964 118 0 20 chr5 17346168 17346465 -182283685 - AluSq SINE Alu -20 293 3 313 232 99 49 chr5 17346699 17346841 -182283309 + L1ME4a LINE L1 5956 6104 -17 23 33 0 0 chr5 17346841 17346871 -182283279 + AT_rich Low_complexity Low_complexity 1 30 0 660 237 147 30 chr5 17347907 17348055 -182282095 + L1MC4a LINE L1 5807 5936 -1872 315 0 0 0 chr5 17348055 17348090 -182282060 + (TG)n Simple_repeat Simple_repeat 1 35 0 660 237 147 30 chr5 17348090 17348274 -182281876 + L1MC4a LINE L1 5936 6178 -1630 21 0 0 0 chr5 17348875 17348896 -182281254 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr5 17349383 17349407 -182280743 + (A)n Simple_repeat Simple_repeat 1 24 0 3568 134 13 19 chr5 17349643 17349825 -182280325 + MER1A DNA MER1_type 2 184 -2516 2345 80 0 0 chr5 17349825 17350125 -182280025 - AluSc SINE Alu -9 300 1 3568 134 13 19 chr5 17350125 17350471 -182279679 + MER1A DNA MER1_type 184 527 0 192 40 0 0 chr5 17350584 17350609 -182279541 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 894 141 0 0 chr5 17350612 17350754 -182279396 - AluSg/x SINE Alu -39 273 132 841 147 0 37 chr5 17350970 17351106 -182279044 + AluJo SINE Alu 1 131 -171 368 269 90 22 chr5 17351194 17351328 -182278822 - MIR SINE MIR -17 245 103 264 313 0 0 chr5 17351347 17351414 -182278736 - L3 LINE CR1 -3 1574 1508 839 220 0 0 chr5 17351439 17351607 -182278543 + AluJo SINE Alu 137 304 -8 267 182 30 15 chr5 17352219 17352285 -182277865 - MLT1K LTR MaLR -339 249 183 298 274 36 0 chr5 17352595 17352679 -182277471 - MLT1D LTR MaLR -418 87 1 821 129 41 18 chr5 17352679 17352705 -182277445 - Charlie5 DNA MER1_type -55 2569 2545 2270 97 0 0 chr5 17352705 17353014 -182277136 + AluSg SINE Alu 1 309 -1 821 129 41 18 chr5 17353014 17353157 -182276993 - Charlie5 DNA MER1_type -79 2545 2396 284 200 147 0 chr5 17353889 17353964 -182276186 - MLT1K LTR MaLR -320 268 183 2430 98 48 25 chr5 17354747 17355103 -182275047 + THE1B LTR MaLR 1 364 0 192 273 36 0 chr5 17355830 17355885 -182274265 - MIR SINE MIR -27 235 179 * 716 226 177 16 chr5 17355872 17356115 -182274035 - L2 LINE L2 -2 3311 3030 1578 287 136 19 chr5 17356215 17356993 -182273157 - L2 LINE L2 -550 2764 1896 181 209 23 0 chr5 17356992 17357035 -182273115 - MIR SINE MIR -82 180 137 * 2125 101 9 22 chr5 17357045 17357361 -182272789 - AluSx SINE Alu 0 312 1 359 309 0 137 chr5 17357361 17357422 -182272728 - MIR SINE MIR -62 146 78 3746 149 17 46 chr5 17357422 17357975 -182272175 + L1MA8 LINE L1 5568 6135 -156 2083 102 7 7 chr5 17357975 17358270 -182271880 + AluY SINE Alu 1 295 -16 3746 149 17 46 chr5 17358270 17358335 -182271815 + L1MA8 LINE L1 6135 6200 -91 1934 144 0 0 chr5 17358335 17358626 -182271524 - AluSx SINE Alu -21 291 1 3746 149 17 46 chr5 17358626 17358712 -182271438 + L1MA8 LINE L1 6200 6253 -38 2282 72 0 3 chr5 17358712 17359004 -182271146 - AluY SINE Alu -20 291 1 3746 149 17 46 chr5 17359004 17359042 -182271108 + L1MA8 LINE L1 6253 6291 0 359 309 0 137 chr5 17359042 17359150 -182271000 - MIR SINE MIR -130 78 5 1457 171 61 11 chr5 17359901 17360181 -182269969 - AluJb SINE Alu -15 297 4 1121 261 68 30 chr5 17360205 17360631 -182269519 - MLT1C LTR MaLR -3 464 23 285 256 143 57 chr5 17360908 17361138 -182269012 + MIR SINE MIR 6 255 -7 198 0 0 0 chr5 17361871 17361893 -182268257 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 503 291 146 0 chr5 17362208 17362366 -182267784 - MER5A DNA MER1_type 0 189 9 2125 124 13 0 chr5 17362488 17362794 -182267356 - AluSx SINE Alu -2 310 1 1883 154 55 19 chr5 17363135 17363460 -182266690 + MER1B DNA MER1_type 1 337 0 300 316 92 40 chr5 17363697 17363871 -182266279 - MIR SINE MIR -70 192 10 2079 106 0 0 chr5 17364070 17364383 -182265767 + AluSx SINE Alu 1 313 0 1625 86 5 5 chr5 17364494 17364747 -182265403 + AluSq SINE Alu 64 316 0 1768 190 16 25 chr5 17365203 17365414 -182264736 - MLT1A1 LTR MaLR 0 365 157 2139 110 3 0 chr5 17365414 17365714 -182264436 - AluSq SINE Alu -12 301 1 1768 190 16 25 chr5 17365714 17365870 -182264280 - MLT1A1 LTR MaLR -208 157 1 1953 131 10 0 chr5 17366478 17366769 -182263381 + AluSq SINE Alu 1 294 -19 384 77 0 0 chr5 17367240 17367292 -182262858 + (TA)n Simple_repeat Simple_repeat 2 53 0 1858 117 43 0 chr5 17367292 17367573 -182262577 - AluSg SINE Alu -17 293 1 246 148 37 19 chr5 17367574 17367628 -182262522 - Alu SINE Alu 0 308 254 949 246 86 0 chr5 17367696 17367928 -182262222 + MIR SINE MIR 8 259 -3 819 198 113 35 chr5 17368039 17368296 -182261854 - LTR19C LTR ERV1 -13 766 490 * 1464 199 24 95 chr5 17368278 17368410 -182261740 - LTR9 LTR ERV1 -221 391 251 2028 95 3 3 chr5 17368410 17368706 -182261444 - AluSx SINE Alu -16 296 1 1464 199 24 95 chr5 17368706 17368925 -182261225 - LTR9 LTR ERV1 -361 251 72 1941 96 10 14 chr5 17368925 17369218 -182260932 + AluSx SINE Alu 1 292 -20 1464 199 24 95 chr5 17369218 17369286 -182260864 - LTR9 LTR ERV1 -540 72 1 425 276 5 95 chr5 17369518 17369728 -182260422 + L1ME3A LINE L1 5704 5894 -276 1981 118 14 0 chr5 17369823 17370111 -182260039 + AluSx SINE Alu 3 294 -18 524 268 196 30 chr5 17370292 17370337 -182259813 - L1ME4a LINE L1 -11 6110 6074 2070 96 7 16 chr5 17370337 17370640 -182259510 - AluY SINE Alu -3 308 9 3525 62 0 17 chr5 17370648 17371112 -182259038 - L1PA7 LINE L1 -1 6153 5698 2118 115 0 31 chr5 17371120 17371443 -182258707 + AluSq SINE Alu 1 313 0 524 268 196 30 chr5 17371443 17371782 -182258368 - L1ME4a LINE L1 -57 6064 5641 192 125 47 0 chr5 17371805 17371869 -182258281 + (TA)n Simple_repeat Simple_repeat 1 67 0 413 214 14 93 chr5 17371870 17372010 -182258140 - L1ME LINE L1 -446 5675 5547 412 280 28 156 chr5 17372850 17373311 -182256839 + L2 LINE L2 2871 3272 0 26 0 0 0 chr5 17373382 17373408 -182256742 + AT_rich Low_complexity Low_complexity 1 26 0 2287 79 3 0 chr5 17373462 17373753 -182256397 - AluSg1 SINE Alu -17 292 1 190 156 250 0 chr5 17373775 17373839 -182256311 + MIR SINE MIR 72 151 -111 189 296 0 0 chr5 17375411 17375455 -182254695 + L2 LINE L2 3191 3234 -79 2308 86 3 6 chr5 17375591 17375905 -182254245 - AluSp SINE Alu 0 313 1 2907 132 5 2 chr5 17378313 17378739 -182251411 + MSTA LTR MaLR 2 428 0 2126 93 0 4 chr5 17378771 17379050 -182251100 + AluSq SINE Alu 19 296 -17 198 0 0 0 chr5 17379513 17379535 -182250615 + (TA)n Simple_repeat Simple_repeat 2 23 0 2000 119 7 0 chr5 17379551 17379845 -182250305 - AluSg SINE Alu -14 296 1 263 189 38 0 chr5 17380478 17380531 -182249619 + Tigger5 DNA MER2_type 1 55 -2268 293 165 0 165 chr5 17380541 17380644 -182249506 + Tigger5 DNA MER2_type 2237 2322 -1 366 183 0 0 chr5 17380659 17380730 -182249420 + (TG)n Simple_repeat Simple_repeat 2 72 0 1097 228 57 15 chr5 17380743 17381006 -182249144 - MLT2D LTR ERVL -50 364 91 577 185 20 80 chr5 17381078 17381229 -182248921 - MER103 DNA DNA -22 144 3 1984 76 0 0 chr5 17381724 17381974 -182248176 - AluY SINE Alu -12 299 50 597 75 0 12 chr5 17382140 17382220 -182247930 - MADE1 DNA Mariner -1 79 1 1986 147 39 52 chr5 17382668 17382711 -182247439 - MER57A LTR ERV1 0 403 361 1874 121 4 4 chr5 17382711 17382991 -182247159 + AluJb SINE Alu 1 280 -32 180 0 0 0 chr5 17382992 17383012 -182247138 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1986 147 39 52 chr5 17383012 17383374 -182246776 - MER57A LTR ERV1 -41 362 1 1984 115 11 0 chr5 17384407 17384694 -182245456 - AluSx SINE Alu -22 290 1 554 267 16 37 chr5 17385155 17385346 -182244804 + LTR33 LTR ERVL 1 187 -334 198 0 0 0 chr5 17385354 17385376 -182244774 + (T)n Simple_repeat Simple_repeat 1 22 0 1922 85 4 0 chr5 17385466 17385725 -182244425 - AluSp SINE Alu -53 260 1 4148 117 13 13 chr5 17385780 17386413 -182243737 + MER51A LTR ERV1 1 633 -1 680 286 65 13 chr5 17386928 17387159 -182242991 - MIR SINE MIR 0 262 20 653 273 157 0 chr5 17387912 17388128 -182242022 + MIR SINE MIR 13 262 0 194 254 0 84 chr5 17388149 17388175 -182241975 - MIR SINE MIR -86 122 95 2207 158 30 25 chr5 17388175 17388537 -182241613 + THE1B LTR MaLR 1 364 0 194 254 0 84 chr5 17388537 17388581 -182241569 - MIR SINE MIR -113 95 58 236 299 11 58 chr5 17388897 17388984 -182241166 + L2 LINE L2 3230 3312 -1 234 357 49 21 chr5 17389386 17389529 -182240621 - L2 LINE L2 -671 2643 2497 180 77 0 0 chr5 17389823 17389849 -182240301 + (TC)n Simple_repeat Simple_repeat 1 26 0 1094 33 22 44 chr5 17390798 17390981 -182239169 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 862 219 0 0 chr5 17391003 17391149 -182239001 - FRAM SINE Alu -30 146 1 737 236 64 55 chr5 17391265 17391581 -182238569 + MER39 LTR ERV1 1 533 -174 1348 136 84 1 chr5 17391604 17392009 -182238141 - LTR54 LTR ERV1 -5 505 10 700 189 8 0 chr5 17392029 17392161 -182237989 + MER39 LTR ERV1 553 685 -22 3637 149 18 43 chr5 17392237 17392577 -182237573 + MER39B LTR ERV1 1 317 -336 2038 143 10 0 chr5 17392577 17392884 -182237266 + AluSx SINE Alu 1 310 -2 3637 149 18 43 chr5 17392884 17393209 -182236941 + MER39B LTR ERV1 317 649 -4 2274 90 7 0 chr5 17393293 17393592 -182236558 + AluSx SINE Alu 12 312 0 2099 137 0 0 chr5 17394697 17394989 -182235161 - AluSx SINE Alu -8 304 13 302 365 34 17 chr5 17395245 17395423 -182234727 - L1MC4a LINE L1 -1836 5972 5792 1219 176 70 19 chr5 17395603 17395916 -182234234 + L1MC4a LINE L1 6163 6491 -1317 1500 183 3 24 chr5 17396007 17396431 -182233719 - AluJo SINE Alu 0 418 1 288 280 43 11 chr5 17397902 17397995 -182232155 - MIR3 SINE MIR -3 205 110 2020 110 0 18 chr5 17398054 17398335 -182231815 - AluSx SINE Alu -36 276 1 1977 141 0 3 chr5 17399340 17399631 -182230519 - AluSx SINE Alu -18 294 5 2149 90 38 3 chr5 17399772 17400061 -182230089 + AluSc SINE Alu 1 299 -10 1743 163 3 29 chr5 17400091 17400397 -182229753 + AluJo SINE Alu 1 298 -14 207 0 0 0 chr5 17400604 17400627 -182229523 + (TA)n Simple_repeat Simple_repeat 1 23 0 2488 161 91 106 chr5 17400629 17401585 -182228565 + MER21A LTR ERV1 26 924 -7 2306 92 0 3 chr5 17401719 17402012 -182228138 - AluSx SINE Alu -20 292 1 1693 101 20 2 chr5 17402261 17402575 -182227575 + MER51B LTR ERV1 1 377 0 234 326 93 88 chr5 17402577 17402636 -182227514 + MIR SINE MIR 69 126 -136 2237 118 0 13 chr5 17402636 17402950 -182227200 - AluSx SINE Alu 0 312 3 234 326 93 88 chr5 17402950 17403083 -182227067 + MIR SINE MIR 126 262 0 2415 48 3 29 chr5 17403205 17403516 -182226634 + AluY SINE Alu 1 303 -8 2424 97 0 0 chr5 17403546 17403854 -182226296 - AluSq SINE Alu -5 308 1 1504 172 24 31 chr5 17403935 17404225 -182225925 + AluJo SINE Alu 5 292 -20 2309 107 0 0 chr5 17404284 17404584 -182225566 - AluSg1 SINE Alu -9 300 1 300 300 0 0 chr5 17404671 17404751 -182225399 - L1MC/D LINE L1 -2024 5784 5705 2924 186 36 42 chr5 17404852 17405491 -182224659 + L1MB5 LINE L1 5527 6161 -13 1641 141 116 0 chr5 17406158 17406435 -182223715 + AluJb SINE Alu 1 309 -3 3784 185 24 10 chr5 17406616 17407331 -182222819 - L1MB5 LINE L1 -8 6166 5442 4251 209 44 59 chr5 17407339 17408652 -182221498 - L1MB5 LINE L1 -755 5391 4099 252 246 33 0 chr5 17408651 17408712 -182221438 + L1MB5 LINE L1 4068 4130 -2016 * 2267 120 0 0 chr5 17409602 17409903 -182220247 + AluSx SINE Alu 1 301 -11 618 219 39 16 chr5 17410091 17410219 -182219931 + MER94 DNA DNA 4 134 0 2210 96 7 0 chr5 17410244 17410537 -182219613 - AluSq SINE Alu -16 297 3 213 289 122 33 chr5 17411582 17411769 -182218381 + MIR SINE MIR 41 241 -21 2353 88 3 0 chr5 17411967 17412263 -182217887 - AluSq SINE Alu -16 297 1 262 301 43 11 chr5 17412634 17412727 -182217423 - MLT1L LTR MaLR -366 249 154 934 122 27 7 chr5 17413712 17413859 -182216291 - L1MA9 LINE L1 -377 5935 5786 1508 134 30 0 chr5 17413859 17414090 -182216060 - Tigger3(Golem) DNA MER2_type -1 3028 2791 2274 100 7 3 chr5 17414360 17414660 -182215490 - AluSx SINE Alu -11 301 1 23 0 0 0 chr5 17414801 17414824 -182215326 + AT_rich Low_complexity Low_complexity 1 23 0 304 272 19 58 chr5 17416806 17416909 -182213241 + L2 LINE L2 3191 3289 -24 229 386 35 7 chr5 17417614 17417759 -182212391 - MIR3 SINE MIR -2 206 58 2894 239 72 27 chr5 17418446 17419374 -182210776 - L1ME3A LINE L1 -5 6234 5265 369 109 0 0 chr5 17419375 17419430 -182210720 + (TCCCC)n Simple_repeat Simple_repeat 4 58 0 1824 175 7 0 chr5 17419457 17419760 -182210390 - AluJb SINE Alu -7 305 1 756 273 75 47 chr5 17419760 17420254 -182209896 - L1ME3A LINE L1 -948 5267 4760 653 256 80 64 chr5 17420458 17420770 -182209380 - L1ME3A LINE L1 -1980 4235 3919 914 173 0 84 chr5 17420787 17420989 -182209161 - MLT1A1 LTR MaLR -46 319 135 316 288 16 40 chr5 17420997 17421122 -182209028 - L1ME3A LINE L1 -2301 3914 3793 2579 189 53 4 chr5 17421122 17421634 -182208516 - MER90 LTR ERV1 0 614 78 2092 142 9 15 chr5 17421626 17421951 -182208199 + MER1B DNA MER1_type 17 339 0 * 1130 169 25 158 chr5 17421994 17422356 -182207794 + MER31B LTR ERV1 1 314 -152 318 286 139 61 chr5 17422359 17422653 -182207497 - L1ME3A LINE L1 -4205 2191 1875 2246 120 3 0 chr5 17423111 17423411 -182206739 - AluSx SINE Alu -11 301 1 1779 153 133 36 chr5 17425212 17425572 -182204578 - MLT2C1 LTR ERVL -1 396 2 32 0 0 0 chr5 17426087 17426119 -182204031 + AT_rich Low_complexity Low_complexity 1 32 0 1711 154 7 18 chr5 17426126 17426405 -182203745 - AluJo SINE Alu -36 276 1 2589 148 54 5 chr5 17427542 17427947 -182202203 - MSTB LTR MaLR -1 425 1 2226 122 3 0 chr5 17428162 17428466 -182201684 - AluSg SINE Alu -5 305 1 379 209 23 17 chr5 17428638 17428815 -182201335 + (CCTAT)n Simple_repeat Simple_repeat 3 180 0 342 0 0 0 chr5 17429077 17429115 -182201035 + (TG)n Simple_repeat Simple_repeat 2 39 0 993 169 47 0 chr5 17432780 17432952 -182197198 - MER5A DNA MER1_type -7 182 3 249 325 189 18 chr5 17432952 17433577 -182196573 + L2 LINE L2 1777 2509 -805 2179 89 7 20 chr5 17433735 17434039 -182196111 - AluY SINE Alu -11 300 1 1051 167 0 0 chr5 17434153 17434315 -182195835 - AluJ SINE Alu -10 302 141 842 149 6 50 chr5 17434416 17434577 -182195573 - AluJ SINE Alu -158 154 1 218 222 32 16 chr5 17434605 17434668 -182195482 - MIR SINE MIR -95 167 104 656 207 76 0 chr5 17434977 17435122 -182195028 - L1MD2 LINE L1 -10 6349 6194 1320 185 63 15 chr5 17435128 17435398 -182194752 - L1MD2 LINE L1 -218 6141 5859 277 123 35 18 chr5 17435397 17435454 -182194696 - L1MDa LINE L1 -3918 2622 2565 * 6064 209 76 36 chr5 17435450 17435477 -182194673 - L1MDa LINE L1 -4781 1759 1735 2104 119 0 13 chr5 17435477 17435495 -182194655 - AluSx SINE Alu -6 306 289 210 71 0 0 chr5 17435495 17435523 -182194627 + (TATG)n Simple_repeat Simple_repeat 2 29 0 2104 119 0 13 chr5 17435523 17435814 -182194336 - AluSx SINE Alu -23 289 1 6064 209 76 36 chr5 17435814 17436116 -182194034 - L1MDa LINE L1 -4805 1735 1447 1462 122 0 0 chr5 17436116 17436312 -182193838 - AluSx SINE Alu -116 196 1 6064 209 76 36 chr5 17436312 17437345 -182192805 - L1MDa LINE L1 -5093 1447 318 2315 109 0 6 chr5 17437345 17437658 -182192492 - AluSx SINE Alu -1 311 1 6064 209 76 36 chr5 17437658 17437916 -182192234 - L1MDa LINE L1 -6222 318 72 257 292 14 0 chr5 17438286 17438358 -182191792 + L2 LINE L2 2588 2660 -654 224 374 71 24 chr5 17438487 17438698 -182191452 + L2 LINE L2 2829 3049 -223 645 283 150 4 chr5 17438819 17439045 -182191105 + MIR SINE MIR 3 261 -1 1219 206 42 8 chr5 17439646 17439907 -182190243 - MLT1A1 LTR MaLR -2 363 94 1576 136 68 106 chr5 17439907 17440190 -182189960 + MER47A DNA MER2_type 1 268 -2055 1841 151 0 7 chr5 17440190 17440462 -182189688 - AluSx SINE Alu -22 290 21 1576 136 68 106 chr5 17440462 17440545 -182189605 + MER47A DNA MER2_type 268 353 -13 445 141 54 43 chr5 17440555 17440647 -182189503 - MLT1A1 LTR MaLR -279 95 3 917 176 7 0 chr5 17440689 17440842 -182189308 - L1PB4 LINE L1 -5 6151 5998 1574 132 143 0 chr5 17441236 17441487 -182188663 - AluSx SINE Alu -24 288 2 236 116 47 0 chr5 17441730 17441773 -182188377 + L2 LINE L2 2935 2979 -334 217 254 60 15 chr5 17441770 17441837 -182188313 - L2 LINE L2 -370 2944 2875 * 1872 163 6 10 chr5 17442075 17442388 -182187762 + AluJo SINE Alu 1 312 0 798 221 60 45 chr5 17442635 17442935 -182187215 + MLT1J2 LTR MaLR 64 367 -42 489 283 177 0 chr5 17443022 17443220 -182186930 + MIR SINE MIR 7 239 -23 423 221 66 37 chr5 17443500 17443636 -182186514 + MLT1G LTR MaLR 56 195 -372 1686 187 7 14 chr5 17443671 17443955 -182186195 - AluJo SINE Alu -30 282 1 833 248 0 0 chr5 17443963 17444120 -182186030 - FRAM SINE Alu -18 158 2 588 264 203 5 chr5 17444174 17444386 -182185764 + MLT1G LTR MaLR 251 504 -86 1590 247 84 40 chr5 17444386 17444909 -182185241 + L1ME3A LINE L1 5391 5936 -234 674 259 32 48 chr5 17445015 17445266 -182184884 + L1ME3A LINE L1 5924 6170 0 366 263 21 0 chr5 17445334 17445429 -182184721 + MLT1G LTR MaLR 499 595 0 277 324 45 36 chr5 17445541 17445652 -182184498 + L2 LINE L2 3155 3266 -6 2351 94 3 0 chr5 17446047 17446344 -182183806 - AluSx SINE Alu -14 298 1 431 319 64 43 chr5 17446515 17446703 -182183447 + MIR3 SINE MIR 14 205 -3 1956 143 14 3 chr5 17446763 17447057 -182183093 - AluSq SINE Alu -16 297 1 2471 154 73 0 chr5 17448991 17449387 -182180763 - MSTB LTR MaLR 0 426 2 289 265 12 12 chr5 17449459 17449542 -182180608 + MIR SINE MIR 172 254 -8 260 226 54 54 chr5 17449633 17449726 -182180424 - MLT1H LTR MaLR 0 549 457 241 218 18 0 chr5 17449911 17449966 -182180184 - MLT1H LTR MaLR -199 350 295 465 244 148 0 chr5 17450028 17450163 -182179987 - MLT1H LTR MaLR -394 155 1 1213 254 81 73 chr5 17450570 17451074 -182179076 + MLT1K LTR MaLR 67 574 -14 298 311 175 39 chr5 17451915 17452224 -182177926 + L2 LINE L2 2921 3271 -1 2232 124 16 59 chr5 17452350 17452703 -182177447 - MER4D LTR ERV1 0 872 536 1685 112 16 8 chr5 17452703 17452961 -182177189 + AluSq SINE Alu 54 313 0 2232 124 16 59 chr5 17452961 17452995 -182177155 - MER4D LTR ERV1 -336 536 502 2124 88 56 7 chr5 17452994 17453300 -182176850 - MER4D LTR ERV1 -551 321 1 * 5072 135 58 15 chr5 17453552 17454410 -182175740 + MER4D LTR ERV1 1 895 -8 583 110 9 46 chr5 17455305 17455414 -182174736 + L1MA4 LINE L1 6196 6300 0 1111 224 56 14 chr5 17455777 17456063 -182174087 - LTR16C LTR ERVL 0 491 194 3101 227 19 9 chr5 17456267 17456914 -182173236 + MER82 DNA MER2_type 1 653 0 2398 88 3 0 chr5 17456916 17457213 -182172937 - AluSq SINE Alu -13 300 3 1861 98 0 0 chr5 17457741 17457985 -182172165 + AluSq SINE Alu 52 295 -18 1906 128 17 27 chr5 17458148 17458482 -182171668 + AluSx SINE Alu 1 312 0 764 243 23 18 chr5 17458764 17458982 -182171168 - L2 LINE L2 -1 3312 3094 265 313 98 40 chr5 17459179 17459527 -182170623 + LTR16C LTR ERVL 122 489 -2 1623 141 0 104 chr5 17459578 17459925 -182170225 + AluY SINE Alu 1 311 0 291 281 83 8 chr5 17460055 17460176 -182169974 - L2 LINE L2 -428 2886 2757 185 195 24 0 chr5 17460439 17460480 -182169670 - L2 LINE L2 -1 3312 3271 1099 120 29 17 chr5 17460541 17460716 -182169434 - L1MB4 LINE L1 0 6180 6004 1655 196 62 57 chr5 17460729 17461148 -182169002 + MER31B LTR ERV1 1 421 -45 3739 172 32 15 chr5 17461187 17461254 -182168896 - L1MB4 LINE L1 -190 5990 5926 1930 199 37 0 chr5 17461254 17461606 -182168544 - MLT1A1 LTR MaLR 0 365 1 3739 172 32 15 chr5 17461606 17462279 -182167871 - L1MB4 LINE L1 -254 5926 5240 1513 223 105 50 chr5 17462296 17462781 -182167369 + MLT2B1 LTR ERVL 1 512 -8 1693 145 0 0 chr5 17463068 17463310 -182166840 - AluSq SINE Alu -71 242 1 371 186 356 17 chr5 17463527 17463645 -182166505 + MER5A DNA MER1_type 32 189 0 4084 120 62 74 chr5 17463669 17465060 -182165090 - pTR5 LTR ERV1 0 2438 66 334 336 25 17 chr5 17465093 17465212 -182164938 - MIR3 SINE MIR -5 203 84 266 255 112 20 chr5 17465306 17465404 -182164746 - MIR3 SINE MIR -11 197 91 780 281 33 83 chr5 17465421 17465483 -182164667 - MLT1I LTR MaLR -3 406 342 2154 105 3 11 chr5 17465483 17465796 -182164354 - AluSx SINE Alu 0 311 1 780 281 33 83 chr5 17465796 17466091 -182164059 - MLT1I LTR MaLR -67 342 66 569 217 169 63 chr5 17466091 17466280 -182163870 + MER63A DNA MER1_type 1 209 -1 2139 114 20 0 chr5 17466344 17466642 -182163508 + AluSx SINE Alu 3 306 -6 25 0 0 0 chr5 17467222 17467247 -182162903 + AT_rich Low_complexity Low_complexity 1 25 0 1917 169 0 3 chr5 17467247 17467555 -182162595 - AluJo SINE Alu -5 307 1 893 260 31 35 chr5 17468090 17468344 -182161806 - MIR SINE MIR -2 260 8 240 305 61 53 chr5 17468696 17468827 -182161323 - L3 LINE CR1 -251 1326 1195 526 244 15 37 chr5 17469793 17469928 -182160222 - MER94 DNA DNA -2 132 1 468 328 101 4 chr5 17470660 17470898 -182159252 + MIR SINE MIR 2 262 0 1590 90 11 93 chr5 17471127 17471395 -182158755 + L1MA5 LINE L1 6053 6298 -2 283 95 0 0 chr5 17471438 17471480 -182158670 - AluSx SINE Alu -4 304 263 1688 96 0 0 chr5 17471481 17471690 -182158460 - AluSx SINE Alu -93 219 11 264 351 23 15 chr5 17472294 17472425 -182157725 - MIR SINE MIR -128 134 3 272 75 25 0 chr5 17472893 17472933 -182157217 + MADE1 DNA Mariner 40 80 0 371 268 62 39 chr5 17474554 17474733 -182155417 - MIR SINE MIR -14 248 66 568 298 19 29 chr5 17474860 17475068 -182155082 + MIR SINE MIR 2 207 -55 25 83 0 0 chr5 17475097 17475157 -182154993 + AT_rich Low_complexity Low_complexity 1 60 0 2083 135 7 0 chr5 17475744 17476040 -182154110 - AluSx SINE Alu -14 298 1 256 324 18 36 chr5 17476115 17476226 -182153924 + L2 LINE L2 2660 2768 -546 322 316 86 48 chr5 17476261 17476470 -182153680 + L2 LINE L2 2757 2973 -341 786 218 12 18 chr5 17476506 17476676 -182153474 + MER5B DNA MER1_type 7 175 -3 618 344 39 23 chr5 17476676 17476933 -182153217 + L2 LINE L2 3011 3271 -1 222 88 18 35 chr5 17480165 17480222 -182149928 + (TA)n Simple_repeat Simple_repeat 1 56 0 470 300 64 55 chr5 17480228 17480448 -182149702 - MIR SINE MIR -28 234 13 201 74 0 0 chr5 17480593 17480620 -182149530 + (TAA)n Simple_repeat Simple_repeat 3 29 0 1624 194 105 25 chr5 17481273 17481462 -182148688 - MLT1B LTR MaLR 0 390 218 2095 141 0 3 chr5 17481462 17481766 -182148384 - AluSx SINE Alu -9 303 1 1624 194 105 25 chr5 17481766 17481937 -182148213 - MLT1B LTR MaLR -172 218 1 235 313 113 9 chr5 17482300 17482415 -182147735 - L2 LINE L2 -9 3263 3137 2820 158 41 6 chr5 17482807 17483275 -182146875 - MER31A LTR ERV1 0 485 2 2188 99 0 40 chr5 17483322 17483644 -182146506 + AluSc SINE Alu 1 309 0 318 411 8 0 chr5 17483748 17483872 -182146278 - L2 LINE L2 -3 3269 3145 25 31 0 0 chr5 17484611 17484643 -182145507 + AT_rich Low_complexity Low_complexity 1 32 0 734 168 0 9 chr5 17484810 17484923 -182145227 + FLAM_A SINE Alu 6 117 -25 449 268 89 56 chr5 17485064 17485277 -182144873 + MIR SINE MIR 4 223 -39 2312 91 3 10 chr5 17485772 17486081 -182144069 - AluSq SINE Alu -6 307 1 432 329 13 0 chr5 17486305 17486460 -182143690 - MLT1K LTR MaLR -8 580 424 613 143 0 38 chr5 17486670 17486775 -182143375 - MER45C DNA AcHobo 0 953 853 1180 78 0 0 chr5 17486778 17486919 -182143231 + AluSp/q SINE Alu 156 296 -17 1735 254 88 70 chr5 17486919 17486945 -182143205 - MER45C DNA AcHobo -716 865 841 345 47 0 0 chr5 17486945 17486988 -182143162 + (TA)n Simple_repeat Simple_repeat 2 44 0 1735 254 88 70 chr5 17486988 17487269 -182142881 - MER45C DNA AcHobo -740 841 566 2534 128 26 0 chr5 17487269 17487621 -182142529 - THE1B LTR MaLR -3 361 1 1735 254 88 70 chr5 17487621 17488110 -182142040 - MER45C DNA AcHobo -1015 566 54 2144 109 0 34 chr5 17488596 17488916 -182141234 - AluSc SINE Alu 0 309 1 27 0 0 0 chr5 17489270 17489297 -182140853 + AT_rich Low_complexity Low_complexity 1 27 0 927 113 0 0 chr5 17489297 17489421 -182140729 - AluJb SINE Alu -187 125 2 2208 110 3 0 chr5 17490539 17490830 -182139320 + AluSx SINE Alu 1 292 -20 709 235 12 0 chr5 17491957 17492119 -182138031 + MER20 DNA MER1_type 56 219 0 2192 126 0 3 chr5 17492856 17493165 -182136985 + AluSx SINE Alu 1 308 -4 1569 259 92 36 chr5 17493193 17493777 -182136373 - HERVL LTR ERVL -1575 4079 3463 1444 216 276 28 chr5 17493777 17494306 -182135844 - MLT2F LTR ERVL 0 663 4 709 265 25 10 chr5 17494309 17494505 -182135645 - HERVL LTR ERVL -2258 3506 3308 4434 58 0 2 chr5 17494560 17495082 -182135068 - L1PA8 LINE L1 -6 6166 5646 310 350 73 32 chr5 17495186 17495500 -182134650 - L1MEd LINE L1 -5044 1075 749 2983 149 60 9 chr5 17498019 17498549 -182131601 + MER89 LTR ERV1 2 558 -1 2236 114 68 52 chr5 17498844 17499213 -182130937 - THE1C LTR MaLR 0 375 1 228 329 0 0 chr5 17499244 17499317 -182130833 - L2 LINE L2 -15 3298 3226 273 57 0 0 chr5 17499490 17499525 -182130625 + (TG)n Simple_repeat Simple_repeat 2 36 0 231 333 22 11 chr5 17499536 17499626 -182130524 + MIR SINE MIR 84 174 -88 369 294 196 0 chr5 17500100 17500263 -182129887 + L2 LINE L2 2563 2757 -557 23 33 0 0 chr5 17500966 17500996 -182129154 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr5 17501219 17501248 -182128902 + AT_rich Low_complexity Low_complexity 1 29 0 430 327 96 56 chr5 17501282 17501836 -182128314 + L2 LINE L2 2736 3311 -2 325 303 97 7 chr5 17501841 17501996 -182128154 - L1ME4a LINE L1 -176 5945 5777 261 116 0 0 chr5 17502006 17502049 -182128101 - L1M4 LINE L1 -971 5175 5133 300 287 87 20 chr5 17502655 17502805 -182127345 + HAL1b LINE L1 424 583 -765 189 0 0 0 chr5 17503148 17503169 -182126981 + (T)n Simple_repeat Simple_repeat 1 21 0 2310 102 0 0 chr5 17503451 17503745 -182126405 + AluSc SINE Alu 1 294 -15 1500 242 142 11 chr5 17503818 17504367 -182125783 + L2 LINE L2 1591 2211 -1103 490 205 70 16 chr5 17504372 17504503 -182125647 - MLT1C LTR MaLR 0 467 345 1898 150 72 85 chr5 17504841 17505177 -182124973 - MSTD LTR MaLR 0 396 64 790 183 15 0 chr5 17505177 17505308 -182124842 + FLAM_C SINE Alu 1 133 0 1898 150 72 85 chr5 17505308 17505372 -182124778 - MSTD LTR MaLR -332 64 1 302 310 84 35 chr5 17506054 17506196 -182123954 + MIR SINE MIR 12 160 -102 1751 109 4 0 chr5 17506407 17506637 -182123513 - AluSx SINE Alu -81 231 1 2887 171 62 10 chr5 17508384 17508864 -182121286 - MLT1D LTR MaLR 0 505 1 258 358 29 15 chr5 17509027 17509164 -182120986 - ERVL LTR ERVL -499 5265 5127 844 265 81 58 chr5 17509373 17510202 -182119948 - L1MEd LINE L1 -4863 1256 520 400 363 126 27 chr5 17510731 17511216 -182118934 - ERVL LTR ERVL -1148 4616 4084 212 162 0 0 chr5 17511585 17511622 -182118528 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2878 157 32 52 chr5 17511661 17512174 -182117976 - L1MA9 LINE L1 -33 6279 5758 6566 138 84 12 chr5 17512174 17512611 -182117539 - Tigger3b DNA MER2_type -1797 1231 827 2233 116 0 0 chr5 17512611 17512903 -182117247 + AluSg SINE Alu 1 292 -18 6566 138 84 12 chr5 17512903 17513614 -182116536 - Tigger3b DNA MER2_type -2201 827 1 264 30 0 0 chr5 17513614 17513647 -182116503 + (TA)n Simple_repeat Simple_repeat 1 33 0 2878 157 32 52 chr5 17513647 17513749 -182116401 - L1MA9 LINE L1 -552 5760 5675 222 296 91 11 chr5 17515659 17515747 -182114403 - L2 LINE L2 -1 3312 3218 237 65 0 0 chr5 17515815 17515846 -182114304 + (GA)n Simple_repeat Simple_repeat 2 32 0 1131 288 81 22 chr5 17515882 17516491 -182113659 - L2 LINE L2 0 3313 2661 3174 116 30 25 chr5 17516765 17517295 -182112855 + MLT2A2 LTR ERVL 1 520 0 348 313 31 25 chr5 17517881 17518041 -182112109 + L3 LINE CR1 1412 1572 -5 743 243 29 33 chr5 17518330 17518540 -182111610 + MER3 DNA MER1_type 1 209 0 623 163 20 7 chr5 17518720 17518873 -182111277 + (TCTA)n Simple_repeat Simple_repeat 4 158 0 28 48 0 0 chr5 17520475 17520517 -182109633 + AT_rich Low_complexity Low_complexity 1 42 0 14920 204 32 32 chr5 17520517 17525394 -182104756 - L1MA5 LINE L1 -6 7315 2455 6815 130 17 247 chr5 17525375 17527970 -182102180 - L1MA5 LINE L1 -5167 2001 5 * 309 308 15 31 chr5 17528012 17528142 -182102008 - LTR16B LTR ERVL -298 166 39 2506 60 7 0 chr5 17528233 17528534 -182101616 + MLT2A1 LTR ERVL 8 310 -134 45505 65 9 1 chr5 17528534 17534134 -182096016 + HERVL-A1-A1 LTR ERVL 13 5654 0 3736 65 0 9 chr5 17534134 17534582 -182095568 + MLT2A1 LTR ERVL 1 444 0 499 313 71 6 chr5 17534583 17534765 -182095385 - ERVL LTR ERVL -1487 4277 4084 1240 146 58 120 chr5 17536097 17536406 -182093744 - L1MC/D LINE L1 -2008 5777 5488 * 1433 165 189 3 chr5 17536403 17536773 -182093377 + L1MCa LINE L1 1830 2268 -4158 1757 232 5 19 chr5 17536960 17537339 -182092811 + MLT1A2 LTR MaLR 1 374 0 797 245 195 14 chr5 17537370 17537734 -182092416 + MLT1C LTR MaLR 27 466 -1 244 255 0 0 chr5 17538225 17538272 -182091878 + polypurine Low_complexity Low_complexity 4 50 0 521 252 7 28 chr5 17538362 17538505 -182091645 - MLT1D LTR MaLR -365 140 1 4148 153 140 7 chr5 17538712 17539440 -182090710 + LTR1B LTR ERV1 2 826 0 203 301 55 0 chr5 17539500 17539573 -182090577 + MIR SINE MIR 71 147 -115 633 272 72 38 chr5 17539959 17540194 -182089956 - MIR SINE MIR -16 246 4 365 149 149 37 chr5 17542193 17542300 -182087850 - L1MB7 LINE L1 -19 6165 6047 22 0 0 0 chr5 17543142 17543164 -182086986 + AT_rich Low_complexity Low_complexity 1 22 0 288 303 53 53 chr5 17543194 17543346 -182086804 + MIR SINE MIR 79 230 -32 1595 152 114 20 chr5 17544320 17544662 -182085488 + THE1C LTR MaLR 2 375 0 288 179 51 51 chr5 17544837 17544915 -182085235 + MLT1L LTR MaLR 231 390 -203 1651 192 36 9 chr5 17547307 17547640 -182082510 - L1PA16 LINE L1 -22 6144 5803 612 363 49 14 chr5 17547869 17548235 -182081915 - LTR16C LTR ERVL 0 491 113 242 210 0 60 chr5 17548827 17548994 -182081156 + (TA)n Simple_repeat Simple_repeat 2 158 0 2227 147 0 16 chr5 17549037 17549411 -182080739 + L1PB1 LINE L1 5776 6143 -8 24 32 0 0 chr5 17549417 17549448 -182080702 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr5 17551109 17551134 -182079016 + AT_rich Low_complexity Low_complexity 1 25 0 356 390 52 0 chr5 17551993 17552338 -182077812 - ERVL LTR ERVL -3700 2064 1656 1162 119 0 0 chr5 17553016 17553204 -182076946 - AluSg/x SINE Alu 0 321 134 1770 96 118 11 chr5 17553204 17553475 -182076675 - AluSg1 SINE Alu -9 300 1 2300 112 48 31 chr5 17554316 17554674 -182075476 + THE1B LTR MaLR 1 364 0 258 62 0 0 chr5 17554674 17554706 -182075444 + THE1B-int LTR MaLR 1 32 -1548 * 3421 111 62 0 chr5 17554704 17555201 -182074949 + THE1B-int LTR MaLR 1053 1580 0 2094 133 48 25 chr5 17555203 17555557 -182074593 + THE1B LTR MaLR 3 364 0 2266 113 0 0 chr5 17556265 17556566 -182073584 - AluSx SINE Alu -11 301 1 303 291 43 10 chr5 17556594 17556713 -182073437 + MIR3 SINE MIR 78 202 -6 2528 74 17 14 chr5 17557006 17557358 -182072792 - L1PA2 LINE L1 -146 6009 5657 778 69 0 0 chr5 17557278 17557379 -182072771 + L1P1 LINE L1 5641 5741 -414 * 1179 133 5 0 chr5 17557436 17557632 -182072518 + L1MA2 LINE L1 6108 6304 0 941 235 110 25 chr5 17557826 17558229 -182071921 - L1M4 LINE L1 -2866 3280 2824 2286 108 0 9 chr5 17558229 17558544 -182071606 - AluSq SINE Alu -1 312 1 941 235 110 25 chr5 17558544 17558650 -182071500 - L1M4 LINE L1 -3322 2824 2728 282 341 157 18 chr5 17558950 17559167 -182070983 + L2 LINE L2 2183 2429 -885 353 361 5 25 chr5 17559186 17559388 -182070762 + L2 LINE L2 3113 3310 -3 3014 127 82 24 chr5 17559453 17559951 -182070199 - MER1A DNA MER1_type 0 527 1 2311 105 0 3 chr5 17560030 17560336 -182069814 - AluSx SINE Alu -7 305 1 304 281 107 8 chr5 17560597 17560718 -182069432 - MLT1H1 LTR MaLR -1 554 422 2128 104 22 32 chr5 17561225 17561541 -182068609 + AluSq SINE Alu 1 313 0 805 216 38 56 chr5 17561934 17562147 -182068003 - MER58A DNA MER1_type -15 209 1 717 185 143 37 chr5 17562326 17562515 -182067635 - MER3 DNA MER1_type 0 209 1 184 70 47 47 chr5 17562545 17562588 -182067562 + A-rich Low_complexity Low_complexity 2 44 0 853 51 8 17 chr5 17562956 17563073 -182067077 - L1PA8 LINE L1 0 6172 6057 180 0 0 0 chr5 17563073 17563093 -182067057 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1685 101 0 0 chr5 17563148 17563385 -182066765 - L1PA8 LINE L1 -11 6161 5925 2150 130 0 0 chr5 17566083 17566391 -182063759 - AluSx SINE Alu -2 310 3 194 300 56 56 chr5 17566563 17566653 -182063497 - L3b LINE CR1 -94 1489 1400 2193 121 0 0 chr5 17566988 17567285 -182062865 - AluSx SINE Alu -13 299 3 188 253 147 27 chr5 17567581 17567656 -182062494 - MIR SINE MIR -69 139 56 233 312 11 21 chr5 17568579 17568672 -182061478 - MIR SINE MIR -81 127 36 339 328 90 25 chr5 17569003 17569204 -182060946 + MIR SINE MIR 20 233 -29 237 65 0 0 chr5 17570114 17570145 -182060005 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 3495 219 55 32 chr5 17570696 17570794 -182059356 - L1MD1 LINE L1 -3 6633 6539 1291 261 19 11 chr5 17570794 17571165 -182058985 - MLT1A2 LTR MaLR 0 374 1 3495 219 55 32 chr5 17571165 17572967 -182057183 - L1MD1 LINE L1 -97 6539 4654 1750 164 31 65 chr5 17572966 17573303 -182056847 - L1MD1 LINE L1 -4582 1958 1638 * 997 69 0 0 chr5 17573303 17573434 -182056716 - L1PB1 LINE L1 -1 6150 6020 1750 164 31 65 chr5 17573434 17573542 -182056608 - L1MD1 LINE L1 -4902 1638 1528 1682 194 66 17 chr5 17573544 17573908 -182056242 - MLT2D LTR ERVL -40 480 1 3841 243 56 21 chr5 17573908 17575189 -182054961 - L1MD1 LINE L1 -5038 1502 19 35 24 0 0 chr5 17575761 17575803 -182054347 + AT_rich Low_complexity Low_complexity 1 42 0 32 0 0 0 chr5 17575832 17575864 -182054286 + AT_rich Low_complexity Low_complexity 1 32 0 278 249 27 141 chr5 17575988 17576173 -182053977 - MIR SINE MIR -79 183 20 4264 277 87 27 chr5 17576439 17578255 -182051895 + L1MEc LINE L1 82 1788 -4427 2256 96 13 10 chr5 17578255 17578557 -182051593 + AluSc SINE Alu 1 303 -6 4264 277 87 27 chr5 17578557 17579614 -182050536 + L1MEc LINE L1 1788 3127 -3088 2235 153 11 0 chr5 17579614 17579974 -182050176 + MER47A DNA MER2_type 1 364 -2 4264 277 87 27 chr5 17579974 17580520 -182049630 + L1MEc LINE L1 3127 3639 -2576 1665 226 79 47 chr5 17581193 17581509 -182048641 - L1ME1 LINE L1 -5 6161 5820 476 32 16 0 chr5 17581509 17581571 -182048579 + (TG)n Simple_repeat Simple_repeat 2 64 0 1665 226 79 47 chr5 17581571 17581786 -182048364 - L1ME1 LINE L1 -346 5820 5613 212 220 20 0 chr5 17581786 17581836 -182048314 + (TA)n Simple_repeat Simple_repeat 2 52 0 306 337 0 0 chr5 17581837 17581926 -182048224 + L1MC4 LINE L1 6614 6702 -1340 * 310 268 0 62 chr5 17581869 17581966 -182048184 - L1MC4 LINE L1 -1337 6705 6615 468 245 0 33 chr5 17581990 17582174 -182047976 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 416 247 16 36 chr5 17582193 17582808 -182047342 + (CATATA)n Simple_repeat Simple_repeat 1 602 0 1336 226 35 15 chr5 17582808 17583313 -182046837 - L1ME1 LINE L1 -560 5606 5088 910 193 0 0 chr5 17583308 17583505 -182046645 + L1MEc LINE L1 4302 4498 -1717 * 15533 57 3 5 chr5 17583505 17585463 -182044687 + L1PA3 LINE L1 1 1955 -4191 26018 31 0 0 chr5 17585463 17589384 -182040766 + L1PA3 LINE L1 2233 6152 -3 2946 207 39 12 chr5 17589386 17590134 -182040016 + L1MEc LINE L1 4467 5234 -981 1359 273 99 13 chr5 17590154 17590620 -182039530 - L1MEc LINE L1 -5658 738 233 679 200 0 13 chr5 17590635 17590790 -182039360 - L1MB8 LINE L1 -1 6177 6025 565 248 81 68 chr5 17590885 17591208 -182038942 - L1ME1 LINE L1 -1296 4850 4524 1138 305 76 8 chr5 17591317 17592045 -182038105 - L1ME1 LINE L1 -1828 4318 3528 386 20 0 0 chr5 17592044 17592095 -182038055 - L1PA2 LINE L1 -2 6153 6103 * 2968 225 54 53 chr5 17592199 17593430 -182036720 + L1ME1 LINE L1 4021 5253 -913 3684 142 18 5 chr5 17593430 17594055 -182036095 + L1PB4 LINE L1 5510 6142 -14 2968 225 54 53 chr5 17594055 17594966 -182035184 + L1ME1 LINE L1 5253 6161 -5 565 207 49 0 chr5 17594976 17595140 -182035010 + L1 LINE L1 2269 2440 -3706 45 75 0 0 chr5 17595515 17595609 -182034541 + AT_rich Low_complexity Low_complexity 1 94 0 1616 154 49 10 chr5 17597023 17597329 -182032821 - MER46B DNA MER2_type 0 236 44 210 37 0 0 chr5 17597696 17597723 -182032427 + (TG)n Simple_repeat Simple_repeat 2 28 0 1335 256 62 41 chr5 17598742 17598881 -182031269 + MER74B LTR ERVL 58 193 -429 2325 95 0 0 chr5 17598881 17599176 -182030974 + AluSc SINE Alu 1 295 -14 1335 256 62 41 chr5 17599176 17599524 -182030626 + MER74B LTR ERVL 193 555 -67 1844 214 36 42 chr5 17599623 17599753 -182030397 + MLT1D LTR MaLR 1 130 -375 1823 146 93 74 chr5 17599753 17600101 -182030049 + MSTB LTR MaLR 1 360 -66 2096 142 0 0 chr5 17600101 17600397 -182029753 + AluSq SINE Alu 1 296 -17 1823 146 93 74 chr5 17600397 17600466 -182029684 + MSTB LTR MaLR 360 426 0 1844 214 36 42 chr5 17600466 17600830 -182029320 + MLT1D LTR MaLR 130 492 -13 389 268 32 24 chr5 17602421 17602544 -182027606 + MIR3 SINE MIR 67 190 -18 2154 176 5 17 chr5 17604060 17604417 -182025733 - L1PB4 LINE L1 -7 6149 5796 225 0 0 0 chr5 17604417 17604442 -182025708 + (TG)n Simple_repeat Simple_repeat 2 26 0 2154 176 5 17 chr5 17604442 17604494 -182025656 - L1PB4 LINE L1 -360 5796 5745 3148 191 13 7 chr5 17604495 17605207 -182024943 + L1 LINE L1 4328 5043 -1103 633 199 0 0 chr5 17605284 17605415 -182024735 + (CA)n Simple_repeat Simple_repeat 2 132 0 2335 185 41 11 chr5 17605416 17605875 -182024275 - MLT2B2 LTR ERVL -40 475 3 729 134 17 0 chr5 17606344 17606463 -182023687 + MLT1E LTR MaLR 40 160 -433 2415 226 68 15 chr5 17606604 17607119 -182023031 + L1M4 LINE L1 4682 5243 -903 1784 172 33 7 chr5 17607119 17607421 -182022729 + AluJo SINE Alu 1 310 -2 2415 226 68 15 chr5 17607421 17607583 -182022567 + L1M4 LINE L1 5243 5395 -751 10688 204 38 10 chr5 17607592 17612919 -182017231 + L1M2 LINE L1 4 5525 -803 2016 172 36 33 chr5 17612919 17613469 -182016681 - MLT2A2 LTR ERVL 0 554 1 657 123 0 0 chr5 17613469 17613575 -182016575 + L1M2 LINE L1 5521 5626 -856 * 10347 162 20 7 chr5 17613570 17614382 -182015768 + L1MA1 LINE L1 3122 3922 -2380 2833 92 0 12 chr5 17614382 17614785 -182015365 + L1PA10 LINE L1 5771 6168 0 10347 162 20 7 chr5 17614785 17617029 -182013121 + L1MA1 LINE L1 3922 6220 -82 2657 151 22 0 chr5 17617029 17617484 -182012666 + L1PA16 LINE L1 5685 6157 -9 26 64 0 0 chr5 17617484 17617531 -182012619 + AT_rich Low_complexity Low_complexity 1 47 0 2102 134 0 6 chr5 17617968 17618282 -182011868 - AluSx SINE Alu 0 312 1 492 296 26 16 chr5 17618718 17618907 -182011243 + LTR16C LTR ERVL 301 491 0 477 280 0 0 chr5 17619286 17619386 -182010764 - L2 LINE L2 -15 3298 3199 23 0 0 0 chr5 17619403 17619426 -182010724 + AT_rich Low_complexity Low_complexity 1 23 0 2486 65 0 3 chr5 17619528 17619837 -182010313 - AluY SINE Alu -3 308 1 2266 81 3 0 chr5 17622318 17622624 -182007526 + AluSp SINE Alu 1 307 0 1263 238 59 0 chr5 17623857 17624177 -182005973 + MER58B DNA MER1_type 1 339 -2 2293 169 24 10 chr5 17624501 17624916 -182005234 + MSTB LTR MaLR 1 421 -5 568 314 207 5 chr5 17624922 17625308 -182004842 + L2 LINE L2 2199 2662 -652 2251 185 114 67 chr5 17626472 17627261 -182002889 + LTR1B LTR ERV1 1 826 0 366 264 32 0 chr5 17628257 17628382 -182001768 + GA-rich Low_complexity Low_complexity 1 129 0 310 270 133 60 chr5 17628385 17628618 -182001532 + L1MCa LINE L1 2229 2478 -3948 323 186 76 25 chr5 17628813 17628931 -182001219 - Charlie1 DNA MER1_type 0 2761 2638 * 1508 209 103 2 chr5 17628930 17629329 -182000821 - Charlie1 DNA MER1_type -1746 1015 576 836 233 30 34 chr5 17629329 17629655 -182000495 - MER92B LTR ERV1 -2 634 94 254 188 16 16 chr5 17629659 17629723 -182000427 + MER58B DNA MER1_type 278 341 0 339 271 17 25 chr5 17630450 17630568 -181999582 - L2 LINE L2 -5 3308 3192 22 0 0 0 chr5 17630700 17630722 -181999428 + AT_rich Low_complexity Low_complexity 1 22 0 2139 151 64 25 chr5 17631307 17631711 -181998439 - MSTA LTR MaLR -4 424 5 1405 152 12 4 chr5 17632257 17632514 -181997636 - L1M2 LINE L1 -718 5573 5315 923 145 6 0 chr5 17632517 17632689 -181997461 + CT-rich Low_complexity Low_complexity 4 176 0 336 328 21 21 chr5 17632913 17633102 -181997048 - MLT1J LTR MaLR -92 419 231 1117 256 0 6 chr5 17634185 17634521 -181995629 - L1PB1 LINE L1 -1017 5129 4796 * 5577 109 5 0 chr5 17634514 17635467 -181994683 + L1PB1 LINE L1 5147 6104 -47 180 111 0 0 chr5 17635910 17635937 -181994213 + (GA)n Simple_repeat Simple_repeat 2 28 0 263 298 215 22 chr5 17635962 17636278 -181993872 - L2 LINE L2 -635 2679 2303 237 258 113 0 chr5 17636331 17636393 -181993757 - L2 LINE L2 0 3313 3245 304 343 87 18 chr5 17636706 17636925 -181993225 + MIR SINE MIR 2 235 -27 565 336 97 25 chr5 17636960 17637484 -181992666 - L2 LINE L2 -1225 2089 1528 350 237 21 10 chr5 17639553 17639650 -181990500 - MER103 DNA DNA -64 102 5 2032 113 4 0 chr5 17641148 17641413 -181988737 - AluSp SINE Alu -47 266 1 308 269 78 14 chr5 17641627 17641768 -181988382 + MLT1J2 LTR MaLR 34 183 -267 263 255 137 65 chr5 17641769 17641922 -181988228 + MLT1J2 LTR MaLR 285 448 -2 296 341 10 73 chr5 17642614 17642819 -181987331 + MIR SINE MIR 23 214 -48 241 280 0 0 chr5 17643899 17643949 -181986201 + (CGTG)n Simple_repeat Simple_repeat 4 53 0 343 279 27 23 chr5 17644025 17644219 -181985931 + L1M4b LINE L1 -533 4294967217 -6359 730 164 62 69 chr5 17644295 17644464 -181985686 - MLT1A1 LTR MaLR 0 365 212 416 271 5 145 chr5 17644936 17645150 -181985000 + MER5A DNA MER1_type 3 186 -3 1280 232 42 10 chr5 17645892 17646275 -181983875 + MER114 LTR ERV 7 401 -247 892 311 37 63 chr5 17646342 17646805 -181983345 + L1M4b LINE L1 175 625 -5688 272 271 59 12 chr5 17646789 17646874 -181983276 + L1M4b LINE L1 985 1073 -5240 * 3193 219 34 7 chr5 17647083 17647916 -181982234 + L1M4b LINE L1 777 1783 -4530 64 50 0 0 chr5 17647965 17648064 -181982086 + AT_rich Low_complexity Low_complexity 1 99 0 238 303 0 0 chr5 17648065 17648154 -181981996 - L1MC4 LINE L1 -1339 6703 6615 311 182 0 0 chr5 17648159 17648214 -181981936 - L1MC4 LINE L1 -1339 6703 6649 955 219 120 61 chr5 17648519 17648887 -181981263 + MLT1G1 LTR MaLR 1 357 -185 786 196 5 43 chr5 17649338 17649522 -181980628 - MER5B DNA MER1_type 0 178 2 2651 158 22 16 chr5 17649644 17650092 -181980058 + LTR32 LTR ERVL 21 471 0 519 301 108 29 chr5 17650156 17650535 -181979615 + MLT1I LTR MaLR 1 409 0 1893 226 73 28 chr5 17651635 17652167 -181977983 - MER74A LTR ERVL -2 556 1 1431 261 68 25 chr5 17652243 17652746 -181977404 - MLT1F1 LTR MaLR 0 567 43 295 209 236 18 chr5 17653019 17653067 -181977083 + MER94 DNA DNA 1 37 -97 2579 104 6 11 chr5 17653067 17653433 -181976717 + THE1B LTR MaLR 1 364 0 295 209 236 18 chr5 17653433 17653494 -181976656 + MER94 DNA DNA 37 134 0 42324 36 22 2 chr5 17654117 17660171 -181969979 + L1PA3 LINE L1 13 6192 0 319 305 21 0 chr5 17660340 17660481 -181969669 - L1ME4a LINE L1 -229 5892 5749 181 363 62 0 chr5 17660537 17660617 -181969533 - MIR SINE MIR -40 222 138 2037 114 0 11 chr5 17661081 17661362 -181968788 + AluSx SINE Alu 22 299 -13 271 296 52 37 chr5 17662009 17662144 -181968006 + MER117 DNA MER1_type 3 139 -58 1795 251 48 39 chr5 17662768 17663588 -181966562 - Charlie2 DNA MER1_type -11 2851 2025 2527 66 3 0 chr5 17663754 17664057 -181966093 + AluSp SINE Alu 2 305 -8 25 0 0 0 chr5 17664412 17664437 -181965713 + AT_rich Low_complexity Low_complexity 1 25 0 2105 152 8 14 chr5 17664520 17664883 -181965267 + MLT1A1 LTR MaLR 5 365 0 317 159 0 14 chr5 17665445 17665514 -181964636 + (TG)n Simple_repeat Simple_repeat 2 69 0 656 328 50 55 chr5 17665756 17666341 -181963809 + ERVL LTR ERVL 3617 4405 -798 334 354 137 15 chr5 17666353 17666616 -181963534 - L2 LINE L2 -566 2748 2454 5920 212 10 6 chr5 17667729 17668072 -181962078 - L1PA16 LINE L1 -1 6165 5825 189 74 0 0 chr5 17668072 17668099 -181962051 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2002 109 22 0 chr5 17668099 17668375 -181961775 - AluSc SINE Alu -27 282 1 5920 212 10 6 chr5 17668375 17670157 -181959993 - L1PA16 LINE L1 -340 5826 4043 243 376 40 10 chr5 17670205 17670306 -181959844 - L2 LINE L2 -2 3311 3208 620 150 9 0 chr5 17671541 17671654 -181958496 + GA-rich Low_complexity Low_complexity 1 114 0 435 252 118 0 chr5 17671764 17671883 -181958267 + MLT1J2 LTR MaLR 72 204 -246 267 308 98 7 chr5 17673718 17673861 -181956289 - MIR SINE MIR -44 218 63 1098 345 71 43 chr5 17675018 17676023 -181954127 + ERVL LTR ERVL 791 1823 -3941 6159 97 21 1 chr5 17676035 17676994 -181953156 - L1PB1 LINE L1 -1 6150 5174 7697 202 21 47 chr5 17676994 17677035 -181953115 + L1 LINE L1 3234 3275 -2871 2587 42 3 0 chr5 17677035 17677342 -181952808 + AluY SINE Alu 1 308 -3 7697 202 21 47 chr5 17677342 17678546 -181951604 + L1 LINE L1 3275 4412 -1734 201 39 0 0 chr5 17678546 17678572 -181951578 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 7697 202 21 47 chr5 17678572 17679304 -181950846 + L1 LINE L1 4412 5161 -985 1524 325 100 36 chr5 17679307 17681118 -181949032 + ERVL LTR ERVL 1775 3708 -1777 1300 313 18 20 chr5 17681405 17681849 -181948301 + ERVL LTR ERVL 4109 4551 -1213 921 312 57 3 chr5 17681953 17682270 -181947880 + ERVL LTR ERVL 4745 5078 -686 438 69 0 0 chr5 17682563 17682621 -181947529 + (TA)n Simple_repeat Simple_repeat 1 58 0 1627 177 62 6 chr5 17683533 17683855 -181946295 + MER2 DNA MER2_type 6 345 0 24 32 0 0 chr5 17684102 17684133 -181946017 + AT_rich Low_complexity Low_complexity 1 31 0 198 244 165 55 chr5 17684757 17684884 -181945266 + L2 LINE L2 3173 3313 0 240 278 113 17 chr5 17684951 17685066 -181945084 - MIR SINE MIR -67 141 16 2212 231 68 49 chr5 17685359 17686261 -181943889 - L1M4 LINE L1 -838 6119 5201 1685 233 36 10 chr5 17687470 17687856 -181942294 - L1M4 LINE L1 -6460 399 4 563 327 48 56 chr5 17687868 17688922 -181941228 - L1MEc LINE L1 -5312 1084 39 24 67 0 0 chr5 17688943 17688988 -181941162 + AT_rich Low_complexity Low_complexity 1 45 0 2045 144 3 0 chr5 17690083 17690382 -181939768 + AluSx SINE Alu 1 300 -12 299 122 0 0 chr5 17690581 17690644 -181939506 + Alu SINE Alu 239 301 0 345 24 0 0 chr5 17690935 17690977 -181939173 + (TG)n Simple_repeat Simple_repeat 1 42 0 367 311 49 18 chr5 17691108 17691272 -181938878 + MIR SINE MIR 5 173 -89 205 328 17 0 chr5 17691803 17691861 -181938289 + L2 LINE L2 3012 3070 -243 23 86 0 0 chr5 17692363 17692421 -181937729 + AT_rich Low_complexity Low_complexity 1 58 0 239 313 0 36 chr5 17692615 17692727 -181937423 + MLT1H LTR MaLR 66 173 -376 4266 170 11 12 chr5 17692842 17693576 -181936574 - MER44D DNA MER2_type 0 605 1 22 56 0 0 chr5 17693703 17693739 -181936411 + AT_rich Low_complexity Low_complexity 1 36 0 442 326 75 27 chr5 17693868 17694162 -181935988 + L1ME4a LINE L1 5576 5883 -238 2882 124 17 2 chr5 17694295 17694867 -181935283 - L1PA16 LINE L1 0 6166 5486 2976 217 11 11 chr5 17694874 17695659 -181934491 + L1 LINE L1 3103 3887 -2259 322 316 83 23 chr5 17696003 17696136 -181934014 - MLT1K LTR MaLR -408 180 40 1981 157 0 20 chr5 17697198 17697504 -181932646 - AluSx SINE Alu -12 300 1 193 344 58 63 chr5 17697674 17697863 -181932287 + MIR3 SINE MIR 16 203 -5 532 218 18 0 chr5 17697962 17698072 -181932078 + HERVL40 LTR ERVL 2794 2905 -2625 729 301 53 61 chr5 17698244 17698620 -181931530 - L2 LINE L2 -682 2632 2260 244 246 14 0 chr5 17698629 17698698 -181931452 - L2 LINE L2 -1320 1994 1925 387 377 52 0 chr5 17698704 17698895 -181931255 - L2 LINE L2 -2070 1244 1044 1532 304 23 4 chr5 17698907 17699426 -181930724 + HERVL40 LTR ERVL 2641 3169 -2595 370 171 40 0 chr5 17699451 17699527 -181930623 - LTR40a LTR ERVL -416 103 25 1211 257 66 12 chr5 17699545 17699864 -181930286 + LTR40a LTR ERVL 175 510 -9 329 269 19 9 chr5 17699879 17699987 -181930163 + HERVL40 LTR ERVL 8 116 -5414 331 254 87 22 chr5 17700289 17700427 -181929723 + HERVL40 LTR ERVL 1077 1223 -4307 320 208 0 26 chr5 17700517 17700594 -181929556 + HERVL40 LTR ERVL 1455 1529 -4001 2747 253 78 16 chr5 17700658 17701464 -181928686 + HERVL40 LTR ERVL 2050 2905 -2625 242 150 0 0 chr5 17701467 17701507 -181928643 + LTR40b LTR ERVL 423 462 0 572 241 19 6 chr5 17701518 17701676 -181928474 - LTR40a LTR ERVL -359 160 1 2597 250 60 23 chr5 17701715 17702065 -181928085 + HERVL40 LTR ERVL 3765 4101 -1663 1849 175 32 48 chr5 17702065 17702465 -181927685 - MSTD LTR MaLR 0 396 3 2597 250 60 23 chr5 17702465 17702901 -181927249 + HERVL40 LTR ERVL 4101 4580 -1184 404 231 28 7 chr5 17702907 17703050 -181927100 - L1M LINE L1 -763 5401 5256 1823 130 75 132 chr5 17703170 17703624 -181926526 - MSTA LTR MaLR 0 428 1 822 274 128 34 chr5 17704115 17704509 -181925641 + MLT1H LTR MaLR 1 488 -61 2274 71 34 0 chr5 17704509 17704805 -181925345 - AluY SINE Alu -5 306 1 822 274 128 34 chr5 17704805 17704869 -181925281 + MLT1H LTR MaLR 488 545 -4 1196 68 0 0 chr5 17705293 17705441 -181924709 + AluY SINE Alu 155 302 -9 2069 109 40 7 chr5 17705458 17705760 -181924390 - AluSx SINE Alu 0 312 1 371 264 210 12 chr5 17705904 17706071 -181924079 + MIR SINE MIR 53 252 -10 201 286 29 14 chr5 17706428 17706498 -181923652 - MIR SINE MIR -110 152 82 252 234 143 26 chr5 17707407 17707484 -181922666 - MIR SINE MIR -85 123 38 3828 143 27 15 chr5 17707625 17708169 -181921981 + L1PA16 LINE L1 5485 6040 -126 2428 50 3 3 chr5 17708169 17708471 -181921679 + AluY SINE Alu 1 302 -9 3828 143 27 15 chr5 17708471 17708590 -181921560 + L1PA16 LINE L1 6040 6156 -10 336 154 0 0 chr5 17708813 17708865 -181921285 + tRNA-Arg-CGC tRNA tRNA 2 53 -23 24 0 0 0 chr5 17709414 17709438 -181920712 + AT_rich Low_complexity Low_complexity 1 24 0 787 247 50 77 chr5 17709620 17710021 -181920129 + MLT1C LTR MaLR 35 424 -43 27 49 0 0 chr5 17711305 17711346 -181918804 + AT_rich Low_complexity Low_complexity 1 41 0 1145 204 47 52 chr5 17712594 17712976 -181917174 + LTR37A LTR ERV1 1 380 -46 738 308 25 8 chr5 17713014 17713254 -181916896 - MIR SINE MIR -1 261 18 1276 207 118 5 chr5 17714140 17714522 -181915628 - L1M4 LINE L1 -876 5270 4846 1110 253 38 40 chr5 17714731 17715102 -181915048 - MLT1A2 LTR MaLR -4 370 1 371 287 55 44 chr5 17715206 17715387 -181914763 - MIR3 SINE MIR -6 202 20 1728 138 70 48 chr5 17717523 17717879 -181912271 - THE1B LTR MaLR 0 364 1 34839 91 11 12 chr5 17718129 17724286 -181905864 + L1PA6 LINE L1 11 6153 -1 191 370 9 44 chr5 17724785 17725012 -181905138 - L2 LINE L2 -2652 662 444 182 234 156 62 chr5 17728433 17728497 -181901653 + MER5B DNA MER1_type 35 104 -74 1899 119 36 103 chr5 17729642 17730030 -181900120 + THE1B LTR MaLR 1 362 -2 878 167 111 12 chr5 17730095 17730451 -181899699 + MLT1D LTR MaLR 85 505 0 3062 161 19 9 chr5 17731688 17732267 -181897883 + L1MA9 LINE L1 5728 6312 0 195 42 0 0 chr5 17733642 17733666 -181896484 + (CA)n Simple_repeat Simple_repeat 1 24 0 221 313 0 15 chr5 17733919 17733986 -181896164 - L2 LINE L2 -9 3263 3198 2027 135 10 3 chr5 17734046 17734334 -181895816 + AluSx SINE Alu 1 290 -22 1126 248 148 19 chr5 17734376 17734886 -181895264 + MER52A LTR ERV1 1 656 -1099 594 222 37 7 chr5 17734883 17735018 -181895132 + MER52A LTR ERV1 1616 1754 -1 * 917 214 99 60 chr5 17735433 17735835 -181894315 - MLT1C LTR MaLR -4 463 46 323 302 19 19 chr5 17737626 17737732 -181892418 + MIR3 SINE MIR 98 203 -5 1509 159 23 13 chr5 17739632 17739933 -181890217 - L1MA7 LINE L1 0 6291 5988 1874 181 38 30 chr5 17739945 17740485 -181889665 - MLT2A2 LTR ERVL -8 546 1 1859 185 30 5 chr5 17740488 17740861 -181889289 - L1MA7 LINE L1 -304 5987 5606 * 1879 178 30 25 chr5 17740859 17741291 -181888859 + L1 LINE L1 4869 5302 -844 319 24 0 0 chr5 17741296 17741337 -181888813 - L1PB1 LINE L1 -254 5897 5857 1707 73 30 0 chr5 17741337 17741560 -181888590 + L1PB1 LINE L1 5911 6151 0 376 111 69 0 chr5 17741566 17741638 -181888512 + L1M4 LINE L1 5177 5253 -893 6175 186 9 11 chr5 17741783 17743468 -181886682 + L1P5 LINE L1 3885 5564 -587 707 218 64 5 chr5 17743609 17743845 -181886305 + L1MEc LINE L1 2055 2269 -4157 285 259 19 19 chr5 17743857 17743965 -181886185 + (TA)n Simple_repeat Simple_repeat 1 108 0 189 281 0 85 chr5 17743976 17744027 -181886123 - MIR SINE MIR -147 115 72 2571 108 3 13 chr5 17744027 17744406 -181885744 - THE1C LTR MaLR 0 375 1 189 281 0 85 chr5 17744406 17744436 -181885714 - MIR SINE MIR -190 72 41 2189 146 66 32 chr5 17745588 17746104 -181884046 - MLT2A2 LTR ERVL 0 554 1 1987 166 26 55 chr5 17746249 17746634 -181883516 - MLT1B LTR MaLR -16 374 1 195 191 71 0 chr5 17746769 17746811 -181883339 - L2 LINE L2 -230 3042 2998 993 308 45 23 chr5 17746830 17747075 -181883075 - L2 LINE L2 -10 3303 3065 2222 142 95 12 chr5 17747075 17747484 -181882666 - MER65A LTR ERV1 0 445 3 993 308 45 23 chr5 17747484 17747819 -181882331 - L2 LINE L2 -248 3065 2712 972 180 115 0 chr5 17747826 17748009 -181882141 + MER3 DNA MER1_type 6 209 0 377 304 149 5 chr5 17748017 17748218 -181881932 - L2 LINE L2 -617 2697 2468 324 278 0 21 chr5 17748619 17748716 -181881434 - L1ME LINE L1 -463 5707 5613 1872 199 5 39 chr5 17748718 17749102 -181881048 + MLT2D LTR ERVL 1 372 -42 450 0 0 0 chr5 17749102 17749152 -181880998 + (CA)n Simple_repeat Simple_repeat 2 51 0 1872 199 5 39 chr5 17749152 17749179 -181880971 + MLT2D LTR ERVL 372 398 -16 299 364 19 6 chr5 17749226 17749388 -181880762 - L1ME LINE L1 -641 5525 5362 453 337 105 32 chr5 17749640 17750260 -181879890 - L1ME LINE L1 -1098 5048 4384 237 121 0 0 chr5 17750550 17750583 -181879567 - MLT1I LTR MaLR -8 401 369 296 278 56 16 chr5 17750823 17750949 -181879201 - MLT1J2 LTR MaLR -319 131 1 355 231 152 63 chr5 17750954 17751257 -181878893 - L1ME LINE L1 -2154 3992 3663 328 330 155 10 chr5 17751344 17751544 -181878606 - L1ME LINE L1 -2717 3429 3201 274 343 43 36 chr5 17751785 17751925 -181878225 + MIR3 SINE MIR 55 195 -13 307 252 67 17 chr5 17751952 17752071 -181878079 + MLT1I LTR MaLR 20 144 -265 1379 179 67 22 chr5 17752965 17753277 -181876873 + L1MB8 LINE L1 5853 6178 0 2236 179 20 20 chr5 17753572 17753968 -181876182 + MSTD LTR MaLR 1 396 0 7843 232 29 21 chr5 17753970 17755690 -181874460 + MSTD-int LTR MaLR 2 1735 0 2276 178 18 25 chr5 17755690 17756088 -181874062 + MSTD LTR MaLR 1 395 -1 2232 106 3 3 chr5 17756366 17756667 -181873483 + AluSg SINE Alu 1 301 -9 462 278 80 6 chr5 17757496 17757672 -181872478 + MIR3 SINE MIR 20 208 0 1856 160 65 9 chr5 17758520 17758845 -181871305 - MER61A LTR ERV1 0 343 1 752 248 96 26 chr5 17758941 17759026 -181871124 - MIR SINE MIR -7 255 177 2094 211 54 66 chr5 17759026 17759600 -181870550 + MLT1F1 LTR MaLR 1 567 0 752 248 96 26 chr5 17759600 17759744 -181870406 - MIR SINE MIR -85 177 10 1446 189 3 40 chr5 17761015 17761316 -181868834 + AluJb SINE Alu 3 292 -20 646 221 41 67 chr5 17762038 17762233 -181867917 - MLT1E2 LTR MaLR -377 249 60 267 280 153 25 chr5 17762602 17762720 -181867430 + MIR SINE MIR 129 261 -1 325 358 37 30 chr5 17762780 17762914 -181867236 + L2 LINE L2 3138 3272 0 360 279 23 0 chr5 17762936 17763022 -181867128 - Charlie8 DNA MER1_type -2329 88 1 270 226 71 24 chr5 17764469 17764553 -181865597 + MLT1G LTR MaLR 33 120 -435 470 300 3 6 chr5 17764843 17765001 -181865149 + MLT1G LTR MaLR 109 274 -314 751 333 110 25 chr5 17765024 17765586 -181864564 + L2 LINE L2 2225 2834 -480 248 286 0 0 chr5 17765686 17765770 -181864380 + L1MC4 LINE L1 6619 6702 -1340 489 321 0 21 chr5 17765875 17766015 -181864135 + L2 LINE L2 3136 3272 0 2393 87 7 0 chr5 17766644 17766944 -181863206 - AluSc SINE Alu -7 302 1 277 283 121 42 chr5 17766945 17767111 -181863039 - L2 LINE L2 -987 2327 2149 295 270 111 32 chr5 17768037 17768163 -181861987 - MER5B DNA MER1_type 0 178 43 741 65 0 0 chr5 17768513 17768621 -181861529 + (TC)n Simple_repeat Simple_repeat 2 109 0 1619 179 8 0 chr5 17768621 17768878 -181861272 - AluJb SINE Alu -48 264 6 273 89 0 0 chr5 17770348 17770393 -181859757 + (A)n Simple_repeat Simple_repeat 1 45 0 353 331 0 6 chr5 17770718 17770896 -181859254 + (TA)n Simple_repeat Simple_repeat 2 178 0 2146 89 0 0 chr5 17770982 17771251 -181858899 + AluSg SINE Alu 36 304 -6 2169 118 0 26 chr5 17771670 17771975 -181858175 - AluSx SINE Alu -15 297 1 2622 134 11 30 chr5 17772603 17773044 -181857106 - L1MB3 LINE L1 -7 6176 5744 4834 157 36 33 chr5 17773079 17773795 -181856355 - pTR5 LTR ERV1 -238 2200 1488 203 77 0 26 chr5 17773795 17773834 -181856316 + (CGGG)n Simple_repeat Simple_repeat 3 40 0 4834 157 36 33 chr5 17773834 17774308 -181855842 - pTR5 LTR ERV1 -950 1488 281 268 232 18 0 chr5 17774312 17774368 -181855782 - U6 snRNA snRNA -49 58 2 716 168 6 0 chr5 17774837 17775010 -181855140 + (ATG)n Simple_repeat Simple_repeat 1 174 0 402 253 0 0 chr5 17775018 17775113 -181855037 - MIR SINE MIR -16 246 152 7688 48 0 0 chr5 17775113 17776471 -181853679 - L1PA6 LINE L1 0 6154 4804 17535 49 2 1 chr5 17776471 17778639 -181851511 + L1PA6 LINE L1 2631 4802 -1344 316 286 67 19 chr5 17778639 17778744 -181851406 - MIR SINE MIR -103 159 50 684 294 68 0 chr5 17779984 17780205 -181849945 + MIR SINE MIR 1 236 -26 216 0 0 0 chr5 17780654 17780678 -181849472 + (GA)n Simple_repeat Simple_repeat 1 24 0 461 269 90 6 chr5 17781124 17781291 -181848859 - MIR SINE MIR -53 209 29 433 252 37 55 chr5 17782355 17782769 -181847381 + L1MC4 LINE L1 7411 8042 0 194 244 0 0 chr5 17783008 17783053 -181847097 + MIR SINE MIR 68 112 -150 1986 130 3 3 chr5 17784521 17784806 -181845344 - AluSx SINE Alu -24 288 4 1942 167 3 0 chr5 17785676 17785982 -181844168 - AluJo SINE Alu -5 307 1 1705 139 53 47 chr5 17786273 17786612 -181843538 + MER4A LTR ERV1 1 341 -323 2176 98 17 7 chr5 17786614 17786909 -181843241 + AluSg SINE Alu 1 298 -12 607 163 195 65 chr5 17786927 17787187 -181842963 + MER4C LTR ERV1 157 457 -8 915 146 0 7 chr5 17787973 17788110 -181842040 - U8 snRNA snRNA 0 136 1 649 304 5 27 chr5 17789209 17789433 -181840717 - MIR SINE MIR -4 258 40 22 0 0 0 chr5 17789520 17789542 -181840608 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr5 17790724 17790746 -181839404 + (TG)n Simple_repeat Simple_repeat 1 22 0 372 211 167 26 chr5 17790805 17790919 -181839231 + MER96 DNA MER1_type? 32 161 -14 3556 94 2 13 chr5 17791469 17791927 -181838223 - MLT2A2 LTR ERVL 0 453 1 580 253 36 24 chr5 17792101 17792267 -181837883 + MER5B DNA MER1_type 1 168 -10 298 253 48 0 chr5 17793454 17793537 -181836613 + MIR SINE MIR 176 262 0 358 305 13 20 chr5 17793641 17793792 -181836358 - MIR SINE MIR -24 238 89 207 0 0 0 chr5 17794623 17794646 -181835504 + (TG)n Simple_repeat Simple_repeat 2 24 0 480 111 0 0 chr5 17796428 17796500 -181833650 + (TA)n Simple_repeat Simple_repeat 2 73 0 231 224 0 0 chr5 17796571 17796620 -181833530 - L1ME4a LINE L1 -106 6015 5967 3791 184 49 26 chr5 17798028 17798752 -181831398 - L1MB2 LINE L1 -4 6167 5461 2102 131 60 23 chr5 17798752 17799103 -181831047 - THE1B LTR MaLR 0 364 1 3791 184 49 26 chr5 17799103 17799233 -181830917 - L1MB2 LINE L1 -710 5461 5335 279 0 0 0 chr5 17799233 17799264 -181830886 + (TG)n Simple_repeat Simple_repeat 2 32 0 3791 184 49 26 chr5 17799264 17799862 -181830288 - L1MB2 LINE L1 -836 5335 4677 336 379 17 34 chr5 17800059 17800236 -181829914 + MIR3 SINE MIR 32 205 -3 367 137 27 0 chr5 17800349 17800422 -181829728 + (TA)n Simple_repeat Simple_repeat 1 75 0 299 223 6 3 chr5 17801323 17801450 -181828700 + MER5A DNA MER1_type 4 188 -1 396 0 0 0 chr5 17802035 17802079 -181828071 + (TG)n Simple_repeat Simple_repeat 2 45 0 1989 197 69 17 chr5 17802660 17802806 -181827344 - L1MD3 LINE L1 -8 7987 7850 2727 155 7 0 chr5 17802806 17803231 -181826919 + MSTC LTR MaLR 1 428 0 1989 197 69 17 chr5 17803231 17803608 -181826542 - L1MD3 LINE L1 -145 7850 7437 16073 208 29 18 chr5 17803745 17810461 -181819689 - L1PA15 LINE L1 -3 6813 6 783 295 115 25 chr5 17811358 17811524 -181818626 + LTR16C LTR ERVL 91 241 -250 1165 161 19 5 chr5 17811524 17811729 -181818421 + MER3 DNA MER1_type 1 208 -1 783 295 115 25 chr5 17811729 17811928 -181818222 + LTR16C LTR ERVL 241 489 -2 2479 55 14 0 chr5 17812409 17812702 -181817448 - AluSp SINE Alu -16 297 1 1020 276 77 8 chr5 17813247 17813754 -181816396 + L1ME3A LINE L1 4177 4718 -1428 1386 248 31 26 chr5 17813909 17814181 -181815969 + L1ME3A LINE L1 4923 5192 -978 2258 121 98 3 chr5 17814181 17814570 -181815580 - MSTA LTR MaLR -2 426 1 1386 248 31 26 chr5 17814570 17815046 -181815104 + L1ME3A LINE L1 5192 5672 -498 186 43 0 0 chr5 17815133 17815156 -181814994 + (TG)n Simple_repeat Simple_repeat 2 24 0 307 209 60 0 chr5 17815205 17815339 -181814811 + (TA)n Simple_repeat Simple_repeat 2 143 0 1351 203 161 5 chr5 17815340 17815745 -181814405 + L1ME3A LINE L1 5660 6127 -43 324 321 7 15 chr5 17816712 17816849 -181813301 + L1M3c LINE L1 1 136 -6005 * 559 343 40 17 chr5 17816818 17817220 -181812930 + L1M3c LINE L1 13 423 -5718 328 254 55 0 chr5 17817377 17817487 -181812663 + L1M3c LINE L1 814 929 -5212 3747 144 80 38 chr5 17817488 17818313 -181811837 + L1MA10 LINE L1 5472 6331 -3 1858 181 13 10 chr5 17821498 17821807 -181808343 - AluJo SINE Alu -2 310 1 1311 172 65 8 chr5 17822011 17822336 -181807814 - Tigger4(Zombi) DNA MER2_type 0 2731 12 757 138 60 0 chr5 17822634 17822750 -181807400 + FLAM_C SINE Alu 2 124 -9 339 143 0 0 chr5 17822788 17822851 -181807299 + L1MA5A LINE L1 4408 4470 -1676 6401 140 12 15 chr5 17822851 17824717 -181805433 + L1MA5A LINE L1 4435 6291 -6 852 313 60 13 chr5 17825740 17826194 -181803956 - LTR33 LTR ERVL -8 513 39 205 238 95 16 chr5 17828042 17828105 -181802045 + L2 LINE L2 3155 3222 -50 258 267 22 11 chr5 17828418 17828508 -181801642 + MER117 DNA MER1_type 1 91 -106 1140 176 63 4 chr5 17830148 17830386 -181799764 - L1MA4 LINE L1 -11 6289 6038 1356 153 18 0 chr5 17830405 17830627 -181799523 - L1PA16 LINE L1 -9 6157 5932 417 161 86 0 chr5 17830627 17830720 -181799430 - L1MA4 LINE L1 -255 6045 5945 * 1681 181 27 6 chr5 17830718 17831083 -181799067 + L1 LINE L1 4616 4988 -1158 1665 211 48 4 chr5 17831084 17831539 -181798611 - Charlie4a DNA MER1_type 0 508 34 2453 81 0 3 chr5 17831539 17831848 -181798302 - AluSx SINE Alu -4 308 1 2278 118 16 16 chr5 17831874 17832247 -181797903 - THE1C LTR MaLR 0 375 3 394 270 100 91 chr5 17832585 17832826 -181797324 - L2 LINE L2 0 3272 3030 319 368 59 30 chr5 17832910 17833350 -181796800 - L2 LINE L2 -421 2893 2441 449 332 111 9 chr5 17833424 17833767 -181796383 - L2 LINE L2 -1209 2105 1728 1374 239 116 64 chr5 17834154 17834747 -181795403 - MLT1E3 LTR MaLR 0 624 1 912 284 61 19 chr5 17834947 17835306 -181794844 - LTR16B LTR ERVL -81 383 10 593 14 0 0 chr5 17835868 17835940 -181794210 - L1P LINE L1 -3665 2481 2410 290 263 13 0 chr5 17836236 17836312 -181793838 + Charlie8 DNA MER1_type 2341 2417 0 254 340 70 49 chr5 17836440 17836625 -181793525 - L2 LINE L2 -130 3183 2995 318 223 58 29 chr5 17837879 17837966 -181792184 + L1PB4 LINE L1 6046 6138 -28 185 0 40 0 chr5 17837966 17837991 -181792159 + (TA)n Simple_repeat Simple_repeat 2 27 0 318 223 58 29 chr5 17837991 17838006 -181792144 + L1PB4 LINE L1 6138 6151 -15 382 193 211 0 chr5 17838058 17838172 -181791978 - LTR16C LTR ERVL -1 490 353 408 265 66 13 chr5 17838271 17838422 -181791728 - L2 LINE L2 0 3313 3155 1061 202 27 62 chr5 17838434 17838770 -181791380 + MER33 DNA MER1_type 1 324 0 397 224 31 20 chr5 17838796 17838894 -181791256 + MER5A DNA MER1_type 14 112 -77 3648 287 83 68 chr5 17839083 17840187 -181789963 - L2 LINE L2 -262 3051 1914 2204 126 96 18 chr5 17840187 17840584 -181789566 - MSTA LTR MaLR 0 428 1 3648 287 83 68 chr5 17840584 17841281 -181788869 - L2 LINE L2 -1399 1914 1229 249 303 83 7 chr5 17841283 17841428 -181788722 + MLT1J LTR MaLR 1 156 -355 387 0 0 0 chr5 17841545 17841588 -181788562 + (TA)n Simple_repeat Simple_repeat 2 44 0 225 204 20 10 chr5 17841669 17841767 -181788383 + (TA)n Simple_repeat Simple_repeat 2 100 0 755 277 103 5 chr5 17841823 17842270 -181787880 + MLT1G1 LTR MaLR 84 595 0 273 302 108 35 chr5 17842421 17842709 -181787441 + MLT1G1-int LTR MaLR 255 563 -808 364 263 30 126 chr5 17843280 17843586 -181786564 + MLT1G1-int LTR MaLR 1032 1297 -74 2941 160 0 16 chr5 17843586 17844079 -181786071 + MER66B LTR ERV1 1 485 -1 364 263 30 126 chr5 17844079 17844144 -181786006 + MLT1G1-int LTR MaLR 1297 1367 -4 1097 250 44 14 chr5 17844144 17844440 -181785710 + MLT1G1 LTR MaLR 1 305 -290 458 289 7 14 chr5 17844501 17844643 -181785507 + MLT1G1 LTR MaLR 453 593 -2 489 312 69 14 chr5 17844656 17844932 -181785218 - L1MEc LINE L1 -4831 1479 1189 262 154 108 0 chr5 17844993 17845058 -181785092 + L1M4c LINE L1 1266 1337 -5047 249 216 102 0 chr5 17845085 17845173 -181784977 - L1MEc LINE L1 -5123 996 900 304 324 9 0 chr5 17845297 17845408 -181784742 - L1MEc LINE L1 -5448 671 560 464 317 94 64 chr5 17845505 17845940 -181784210 - L1MEc LINE L1 -5663 456 9 185 0 40 0 chr5 17846871 17846896 -181783254 + (TAA)n Simple_repeat Simple_repeat 2 27 0 946 49 16 44 chr5 17847453 17847487 -181782663 + (TTTC)n Simple_repeat Simple_repeat 1 211 0 946 49 16 44 chr5 17847487 17847670 -181782480 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 659 204 0 0 chr5 17847755 17847868 -181782282 - FLAM_A SINE Alu -29 113 1 378 0 0 0 chr5 17848047 17848089 -181782061 + (TA)n Simple_repeat Simple_repeat 1 42 0 1750 161 0 0 chr5 17848142 17848416 -181781734 + AluSx SINE Alu 38 311 -1 827 189 6 47 chr5 17848881 17849073 -181781077 + MLT2C2 LTR ERVL 214 464 0 216 0 0 0 chr5 17849105 17849129 -181781021 + (CA)n Simple_repeat Simple_repeat 2 25 0 204 259 9 17 chr5 17850468 17850584 -181779566 + GA-rich Low_complexity Low_complexity 1 115 0 19437 156 105 14 chr5 17850653 17856145 -181774005 + L1M1 LINE L1 13 6028 -1537 2104 94 0 4 chr5 17856145 17856420 -181773730 + AluSq SINE Alu 40 313 0 2639 171 63 4 chr5 17856425 17856887 -181773263 + MER41D LTR ERV1 63 551 -6 1233 285 93 2 chr5 17856910 17857327 -181772823 - L2 LINE L2 -730 2584 2130 216 322 76 8 chr5 17857320 17857438 -181772712 - MIR SINE MIR -89 173 48 * 279 317 110 37 chr5 17858049 17858213 -181771937 - MIR3 SINE MIR -1 207 32 476 284 85 0 chr5 17858454 17858595 -181771555 + MIR SINE MIR 110 262 0 202 321 51 51 chr5 17858613 17858750 -181771400 + MIR SINE MIR 40 143 -65 24 77 0 0 chr5 17860388 17860440 -181769710 + AT_rich Low_complexity Low_complexity 1 52 0 638 106 10 0 chr5 17860441 17860545 -181769605 - L1PA13 LINE L1 -5 6158 6054 1820 250 88 20 chr5 17861438 17862619 -181767531 + L1MEc LINE L1 1846 3066 -3149 1128 266 155 12 chr5 17862803 17863408 -181766742 + L1MEc LINE L1 3333 4024 -2191 33 0 0 23 chr5 17863428 17863448 -181766702 + AT_rich Low_complexity Low_complexity 1 20 -23 1738 176 0 37 chr5 17863448 17863772 -181766378 - AluSx SINE Alu 0 312 1 33 0 0 23 chr5 17863772 17863795 -181766355 + AT_rich Low_complexity Low_complexity 20 43 0 1355 258 74 27 chr5 17863830 17864384 -181765766 + L1MEc LINE L1 4608 5187 -1028 2025 156 106 14 chr5 17864637 17865054 -181765096 - MLT1D LTR MaLR -10 495 41 1944 136 3 20 chr5 17867178 17867479 -181762671 - AluSq SINE Alu -17 296 1 546 284 124 63 chr5 17867979 17868310 -181761840 + L2 LINE L2 2963 3313 0 314 222 19 28 chr5 17868892 17869000 -181761150 + (TA)n Simple_repeat Simple_repeat 2 108 0 3587 26 0 0 chr5 17869794 17870217 -181759933 - L1PA2 LINE L1 0 6155 5733 408 71 0 0 chr5 17870294 17870350 -181759800 + (TG)n Simple_repeat Simple_repeat 2 57 0 1677 167 70 19 chr5 17870687 17871058 -181759092 + MLT1B LTR MaLR 1 390 0 232 220 20 0 chr5 17871147 17871197 -181758953 + MLT1H LTR MaLR 73 123 -426 * 598 314 29 41 chr5 17871191 17871522 -181758628 + LTR33 LTR ERVL 5 357 -164 2042 122 74 14 chr5 17871522 17871875 -181758275 + THE1C LTR MaLR 2 375 0 598 314 29 41 chr5 17871875 17871987 -181758163 + LTR33 LTR ERVL 357 469 -52 180 0 0 0 chr5 17872100 17872120 -181758030 + (TGG)n Simple_repeat Simple_repeat 3 22 0 830 235 181 91 chr5 17872489 17872548 -181757602 + MLT1H LTR MaLR 1 53 -496 2371 116 11 30 chr5 17872548 17872919 -181757231 - THE1B LTR MaLR 0 364 1 830 235 181 91 chr5 17872919 17873312 -181756838 + MLT1H LTR MaLR 53 534 -15 353 324 7 21 chr5 17873333 17873478 -181756672 - MLT1J LTR MaLR -141 370 228 3593 71 9 4 chr5 17873847 17874314 -181755836 - MER41A LTR ERV1 -85 469 1 13170 86 23 4 chr5 17874314 17876132 -181754018 - MER41A-int LTR ERV1 -2 5944 4092 * 14110 124 84 42 chr5 17876114 17879660 -181750490 - MER41A-int LTR ERV1 -2189 3757 1 21 0 0 0 chr5 17879789 17879810 -181750340 + AT_rich Low_complexity Low_complexity 1 21 0 390 237 52 10 chr5 17880173 17880270 -181749880 - MER5C DNA MER1_type -204 120 20 683 279 66 61 chr5 17880393 17880770 -181749380 - LTR16C LTR ERVL -15 476 98 22 0 0 0 chr5 17881349 17881371 -181748779 + AT_rich Low_complexity Low_complexity 1 22 0 1820 130 61 66 chr5 17881703 17882080 -181748070 + THE1C LTR MaLR 1 375 0 244 217 174 0 chr5 17882355 17882424 -181747726 - MIR SINE MIR -76 186 106 312 294 81 36 chr5 17882961 17883458 -181746692 - L1M4 LINE L1 -1527 4619 4101 757 129 0 0 chr5 17885026 17885142 -181745008 + AluY SINE Alu 194 309 -2 2434 90 0 0 chr5 17885291 17885601 -181744549 - AluSx SINE Alu -2 310 1 248 292 136 58 chr5 17886591 17886899 -181743251 + MLT1K LTR MaLR 210 541 -47 24 0 0 0 chr5 17886921 17886945 -181743205 + AT_rich Low_complexity Low_complexity 1 24 0 249 174 0 0 chr5 17886971 17887017 -181743133 + L2 LINE L2 2998 3043 -229 238 255 0 0 chr5 17887780 17887831 -181742319 + (CA)n Simple_repeat Simple_repeat 2 52 0 593 314 74 35 chr5 17888086 17888369 -181741781 - L2 LINE L2 -1074 2240 1947 3970 221 46 25 chr5 17888375 17889787 -181740363 + L1M4 LINE L1 3119 4574 -2991 2312 111 19 6 chr5 17889818 17890177 -181739973 + L1PB1 LINE L1 5788 6151 0 1577 329 86 32 chr5 17890196 17891338 -181738812 - L2 LINE L2 -1362 1952 750 396 269 186 84 chr5 17891338 17891672 -181738478 - L2 LINE L2 -2825 489 122 364 337 151 12 chr5 17892763 17892929 -181737221 + MIR3 SINE MIR 9 197 -11 309 293 84 19 chr5 17892987 17893202 -181736948 + L1ME LINE L1 5383 5611 -510 395 91 0 15 chr5 17893288 17893354 -181736796 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 21 0 0 0 chr5 17893509 17893530 -181736620 + AT_rich Low_complexity Low_complexity 1 21 0 193 330 50 20 chr5 17893546 17893646 -181736504 - L2 LINE L2 0 3313 3211 243 0 0 0 chr5 17893721 17893748 -181736402 + (T)n Simple_repeat Simple_repeat 1 27 0 564 332 19 5 chr5 17893748 17893953 -181736197 - L2 LINE L2 -251 3062 2855 1044 267 26 114 chr5 17894067 17894708 -181735442 - L2 LINE L2 -458 2856 2272 1210 281 53 41 chr5 17895683 17896171 -181733979 - MLT1K LTR MaLR -4 584 91 1439 187 79 50 chr5 17896174 17896553 -181733597 - MLT1B LTR MaLR 0 390 1 446 318 46 0 chr5 17897178 17897351 -181732799 + LTR16A LTR ERVL 1 181 -269 248 212 91 15 chr5 17897368 17897500 -181732650 + L1M4 LINE L1 5651 5792 -1773 2951 312 44 21 chr5 17897860 17899636 -181730514 - HERV16 LTR ERVL -3085 1911 1 1050 312 122 15 chr5 17899642 17900043 -181730107 - LTR16A LTR ERVL -6 444 1 1098 120 0 13 chr5 17900081 17900239 -181729911 - AluSg/x SINE Alu -1 311 156 338 308 68 27 chr5 17900282 17900574 -181729576 - L1M4 LINE L1 -5128 1414 1111 27 0 0 0 chr5 17900959 17900986 -181729164 + AT_rich Low_complexity Low_complexity 1 27 0 1456 124 42 0 chr5 17900990 17901231 -181728919 - L1MA5A LINE L1 -9 6288 6038 417 312 108 19 chr5 17901343 17901500 -181728650 + MER91A DNA MER1_type 1 171 -25 523 347 134 48 chr5 17902297 17902654 -181727496 + L2 LINE L2 2877 3264 -8 1266 163 30 72 chr5 17902746 17903010 -181727140 + AluJo SINE Alu 1 253 -59 7697 204 60 6 chr5 17903236 17906097 -181724053 - L1MB4 LINE L1 -2 6676 3659 1999 161 3 0 chr5 17906136 17906447 -181723703 - AluJb SINE Alu 0 312 1 4806 226 99 20 chr5 17906454 17908321 -181721829 - L1MB4 LINE L1 -3773 2871 802 381 282 69 42 chr5 17908667 17908883 -181721267 - L1MB4 LINE L1 -6320 222 1 198 0 0 0 chr5 17908890 17908912 -181721238 + (T)n Simple_repeat Simple_repeat 1 22 0 1186 171 60 51 chr5 17910092 17910400 -181719750 - L1PB4 LINE L1 -7 6149 5841 21 71 0 0 chr5 17913021 17913063 -181717087 + AT_rich Low_complexity Low_complexity 1 42 0 1606 171 193 11 chr5 17916460 17916822 -181713328 + MSTA LTR MaLR 1 428 0 8401 146 10 41 chr5 17916825 17918265 -181711885 + MSTA-int LTR MaLR 4 1399 -181 563 206 0 0 chr5 17918440 17918537 -181711613 - Tigger7 DNA MER2_type -1 2486 2390 1526 201 15 0 chr5 17918538 17918801 -181711349 - Tigger7 DNA MER2_type -466 267 1 187 250 132 29 chr5 17918859 17918927 -181711223 + L2 LINE L2 3194 3268 -4 992 227 9 14 chr5 17918996 17919216 -181710934 + MER20 DNA MER1_type 1 219 0 1256 158 35 0 chr5 17921668 17921922 -181708228 - L1MA9 LINE L1 -6 6306 6044 25 90 0 0 chr5 17922050 17922117 -181708033 + AT_rich Low_complexity Low_complexity 1 67 0 223 250 0 0 chr5 17922914 17922958 -181707192 + polypurine Low_complexity Low_complexity 1 44 0 904 296 96 39 chr5 17923486 17924011 -181706139 + L2 LINE L2 2757 3311 -2 772 256 55 0 chr5 17924117 17924316 -181705834 - MER63A DNA MER1_type 0 210 1 374 345 9 0 chr5 17924338 17924451 -181705699 + MIR SINE MIR 36 149 -59 364 329 48 17 chr5 17924717 17925009 -181705141 - L1MEc LINE L1 -2469 3746 3446 207 162 0 0 chr5 17925638 17925675 -181704475 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 301 196 0 0 chr5 17925679 17925735 -181704415 - L1MC4 LINE L1 -1339 6703 6648 378 215 81 13 chr5 17925800 17925949 -181704201 - L1MEc LINE L1 -3784 2431 2273 330 280 82 48 chr5 17926241 17926448 -181703702 - L1MEc LINE L1 -4567 1829 1616 302 376 8 8 chr5 17926741 17926858 -181703292 - L2 LINE L2 -5 3308 3192 235 219 16 47 chr5 17927131 17927195 -181702955 - L1P LINE L1 -3276 2870 2809 497 271 54 50 chr5 17927361 17927641 -181702509 - MLT1J LTR MaLR 0 511 231 236 279 15 0 chr5 17927688 17927756 -181702394 - MLT1L LTR MaLR -342 273 205 1214 256 0 6 chr5 17928627 17928963 -181701187 - L1PB1 LINE L1 -1017 5129 4796 * 5882 107 9 0 chr5 17928956 17929907 -181700243 + L1PB1 LINE L1 5147 6104 -47 202 106 43 21 chr5 17930341 17930388 -181699762 + GA-rich Low_complexity Low_complexity 2 49 0 241 301 215 22 chr5 17930402 17930718 -181699432 - L2 LINE L2 -635 2679 2303 236 258 113 0 chr5 17930771 17930833 -181699317 - L2 LINE L2 0 3313 3245 304 343 87 18 chr5 17931145 17931364 -181698786 + MIR SINE MIR 2 235 -27 547 338 97 25 chr5 17931399 17931923 -181698227 - L2 LINE L2 -1225 2089 1528 383 242 20 10 chr5 17933995 17934094 -181696056 - MER103 DNA DNA -64 102 3 1996 118 4 0 chr5 17935590 17935853 -181694297 - AluSp SINE Alu -47 266 3 345 267 109 43 chr5 17936043 17936368 -181693782 + MLT1J2 LTR MaLR 1 448 -2 296 341 10 73 chr5 17937060 17937265 -181692885 + MIR SINE MIR 23 214 -48 241 280 0 0 chr5 17938345 17938395 -181691755 + (CGTG)n Simple_repeat Simple_repeat 4 53 0 343 279 27 23 chr5 17938471 17938665 -181691485 + L1M4b LINE L1 -533 4294967217 -6359 730 164 62 69 chr5 17938741 17938910 -181691240 - MLT1A1 LTR MaLR 0 365 212 416 271 5 145 chr5 17939382 17939596 -181690554 + MER5A DNA MER1_type 3 186 -3 1280 232 42 10 chr5 17940338 17940721 -181689429 + MER114 LTR ERV 7 401 -247 895 311 37 63 chr5 17940789 17941252 -181688898 + L1M4b LINE L1 175 625 -5688 272 271 59 12 chr5 17941236 17941321 -181688829 + L1M4b LINE L1 985 1073 -5240 * 3229 219 33 7 chr5 17941530 17942364 -181687786 + L1M4b LINE L1 777 1783 -4530 42 20 0 0 chr5 17942413 17942462 -181687688 + AT_rich Low_complexity Low_complexity 1 49 0 417 188 0 0 chr5 17942462 17942547 -181687603 + (TA)n Simple_repeat Simple_repeat 2 86 0 246 276 23 0 chr5 17942548 17942635 -181687515 - L1MC4 LINE L1 -1339 6703 6615 307 173 0 0 chr5 17942640 17942692 -181687458 - L1MC4 LINE L1 -1339 6703 6652 957 218 120 61 chr5 17943000 17943368 -181686782 + MLT1G1 LTR MaLR 1 357 -185 786 196 5 43 chr5 17943823 17944007 -181686143 - MER5B DNA MER1_type 0 178 2 2647 158 22 16 chr5 17944129 17944577 -181685573 + LTR32 LTR ERVL 21 471 0 525 302 108 26 chr5 17944641 17945019 -181685131 + MLT1I LTR MaLR 1 409 0 1883 214 77 36 chr5 17946119 17946653 -181683497 - MER74A LTR ERVL -2 556 1 1423 257 70 23 chr5 17946729 17947204 -181682946 - MLT1F1 LTR MaLR 0 567 71 292 209 236 18 chr5 17947505 17947553 -181682597 + MER94 DNA DNA 1 37 -97 2566 107 6 11 chr5 17947553 17947919 -181682231 + THE1B LTR MaLR 1 364 0 292 209 236 18 chr5 17947919 17947980 -181682170 + MER94 DNA DNA 37 134 0 43353 37 24 2 chr5 17948603 17954159 -181675991 + L1P1 LINE L1 13 5697 -458 1184 107 42 56 chr5 17954666 17954881 -181675269 + L1PA2 LINE L1 5944 6155 0 2383 94 0 0 chr5 17955317 17955614 -181674536 - AluY SINE Alu -14 297 1 264 231 22 22 chr5 17956422 17956513 -181673637 + MLT1H LTR MaLR 68 137 -272 1212 221 71 69 chr5 17956535 17956928 -181673222 + MSTD LTR MaLR 3 396 0 291 214 32 117 chr5 17957054 17957208 -181672942 + MLT1H LTR MaLR 405 545 -4 1622 210 25 33 chr5 17957354 17957716 -181672434 + MLT1A1 LTR MaLR 2 360 -5 5651 88 12 7 chr5 17958341 17959092 -181671058 + L1PA13 LINE L1 5408 6162 -1 324 358 127 19 chr5 17959405 17959721 -181670429 - L2 LINE L2 -461 2853 2504 330 26 0 0 chr5 17960889 17960928 -181669222 + (TG)n Simple_repeat Simple_repeat 2 40 0 627 206 0 79 chr5 17961285 17961332 -181668818 + MER96B DNA MER1_type? 1 50 -367 1480 213 62 58 chr5 17961332 17961797 -181668353 + MLT1C LTR MaLR 1 467 0 627 206 0 79 chr5 17961797 17961938 -181668212 + MER96B DNA MER1_type? 50 174 -243 225 0 0 0 chr5 17965419 17965444 -181664706 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1820 166 57 38 chr5 17966565 17966932 -181663218 - MLT1A2 LTR MaLR 0 374 1 259 83 0 0 chr5 17966955 17966991 -181663159 + L2 LINE L2 3025 3060 -212 1934 155 8 20 chr5 17967296 17967678 -181662472 - Tigger3(Golem) DNA MER2_type 0 3029 4 21 0 0 0 chr5 17967709 17967730 -181662420 + AT_rich Low_complexity Low_complexity 1 21 0 450 196 122 14 chr5 17968242 17968390 -181661760 + MER5C DNA MER1_type 127 290 -34 1093 170 100 5 chr5 17968807 17969007 -181661143 - MER20 DNA MER1_type 0 219 1 306 287 49 25 chr5 17969032 17969154 -181660996 - MIR SINE MIR -93 169 45 45053 36 0 3 chr5 17969371 17975578 -181654572 + L1PA3 LINE L1 1 6191 0 343 305 21 0 chr5 17975747 17975888 -181654262 - L1ME4a LINE L1 -229 5892 5749 186 222 111 0 chr5 17975944 17975989 -181654161 - MIR SINE MIR -40 222 173 2044 114 0 11 chr5 17976490 17976771 -181653379 + AluSx SINE Alu 22 299 -13 273 296 52 37 chr5 17977418 17977553 -181652597 + MER117 DNA MER1_type 3 139 -58 1927 248 48 39 chr5 17978176 17978996 -181651154 - Charlie2 DNA MER1_type -11 2851 2025 2509 61 3 0 chr5 17979177 17979473 -181650677 + AluSp SINE Alu 7 303 -10 25 0 0 0 chr5 17979828 17979853 -181650297 + AT_rich Low_complexity Low_complexity 1 25 0 2230 160 8 14 chr5 17979936 17980299 -181649851 + MLT1A1 LTR MaLR 5 365 0 317 159 0 14 chr5 17980861 17980930 -181649220 + (TG)n Simple_repeat Simple_repeat 2 69 0 654 332 50 55 chr5 17981172 17981757 -181648393 + MERVL LTR ERVL 3617 4405 -798 322 354 137 15 chr5 17981769 17982032 -181648118 - L2 LINE L2 -566 2748 2454 30 0 0 0 chr5 17983127 17983157 -181646993 + AT_rich Low_complexity Low_complexity 1 30 0 315 305 138 20 chr5 17983665 17983868 -181646282 + L1ME LINE L1 5352 5525 -641 1872 199 5 39 chr5 17983882 17983909 -181646241 - MLT2D LTR ERVL -16 398 372 504 0 0 0 chr5 17983909 17983965 -181646185 + (TG)n Simple_repeat Simple_repeat 2 57 0 1872 199 5 39 chr5 17983965 17984349 -181645801 - MLT2D LTR ERVL -42 372 1 324 278 0 21 chr5 17984351 17984448 -181645702 + L1ME LINE L1 5613 5707 -463 377 304 149 5 chr5 17984849 17985050 -181645100 + L2 LINE L2 2468 2697 -617 972 180 115 0 chr5 17985058 17985241 -181644909 - MER3 DNA MER1_type 0 209 6 799 295 41 62 chr5 17985248 17985583 -181644567 + L2 LINE L2 2712 3027 -286 2074 136 88 31 chr5 17985583 17986002 -181644148 + MER65A LTR ERV1 3 445 0 799 295 41 62 chr5 17986002 17986274 -181643876 + L2 LINE L2 3027 3303 -10 201 293 82 48 chr5 17986599 17986807 -181643343 - L2 LINE L2 -1284 2030 1816 2250 109 0 0 chr5 17986850 17987143 -181643007 + AluSx SINE Alu 1 293 -19 2279 193 24 74 chr5 17987223 17987517 -181642633 - MER21B LTR ERV1 -3 860 553 1730 145 19 0 chr5 17987517 17987779 -181642371 + AluJb SINE Alu 2 268 -44 2279 193 24 74 chr5 17987779 17987794 -181642356 - MER21B LTR ERV1 -310 553 539 207 0 0 0 chr5 17987794 17987817 -181642333 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2279 193 24 74 chr5 17987817 17988060 -181642090 - MER21B LTR ERV1 -324 539 335 6561 91 2 0 chr5 17988060 17988902 -181641248 + THE1B-int LTR MaLR 737 1580 0 2272 141 30 25 chr5 17988902 17989264 -181640886 + THE1B LTR MaLR 1 364 0 261 337 0 12 chr5 17989755 17989841 -181640309 + L2 LINE L2 3186 3270 -2 1588 218 22 14 chr5 17989983 17990341 -181639809 - MLT1H1 LTR MaLR 0 555 195 639 229 6 60 chr5 17990341 17990524 -181639626 + MER20 DNA MER1_type 3 175 -44 277 228 129 30 chr5 17990545 17990646 -181639504 - MLT1H1 LTR MaLR -351 204 95 277 277 128 14 chr5 17990649 17990790 -181639360 - MLT1G1 LTR MaLR -438 157 1 453 276 32 19 chr5 17991422 17991578 -181638572 + Charlie8 DNA MER1_type 62 219 -2198 249 119 0 0 chr5 17991683 17991725 -181638425 + (TAA)n Simple_repeat Simple_repeat 2 43 0 383 297 77 46 chr5 17991966 17992161 -181637989 + MLT1H LTR MaLR 119 319 -230 353 244 8 32 chr5 17992293 17992416 -181637734 - L1MC5 LINE L1 -36 7925 7806 1765 169 7 0 chr5 17992931 17993221 -181636929 - AluSx SINE Alu -20 292 1 1178 239 84 22 chr5 17993293 17993698 -181636452 - L1MC/D LINE L1 -2000 5808 5379 294 183 37 0 chr5 17993698 17993780 -181636370 + (TA)n Simple_repeat Simple_repeat 2 86 0 198 71 0 0 chr5 17993781 17993809 -181636341 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 648 222 86 56 chr5 17993813 17993975 -181636175 - AluJb SINE Alu -23 289 123 1272 285 87 25 chr5 17994079 17994563 -181635587 - MER34 LTR ERV1 0 542 29 600 247 0 20 chr5 17995476 17995622 -181634528 - LTR67 LTR ERVL -5 552 410 1325 262 91 29 chr5 17995914 17996398 -181633752 + MLT1E LTR MaLR 75 588 -5 189 121 0 0 chr5 17996479 17996512 -181633638 + (A)n Simple_repeat Simple_repeat 1 33 0 417 110 55 0 chr5 17997148 17997221 -181632929 - L1M4 LINE L1 -3172 2974 2898 448 276 97 21 chr5 17997454 17997599 -181632551 - MIR SINE MIR -70 192 37 2199 107 48 46 chr5 17998306 17998679 -181631471 - THE1C LTR MaLR -1 374 1 21 82 0 0 chr5 17998771 17998820 -181631330 + AT_rich Low_complexity Low_complexity 1 49 0 34 55 0 0 chr5 17998909 17998964 -181631186 + AT_rich Low_complexity Low_complexity 1 55 0 20793 151 8 9 chr5 17999552 18004483 -181625667 - L1PA11 LINE L1 -2 7610 2680 1785 122 131 24 chr5 18004483 18004812 -181625338 + THE1B LTR MaLR 1 364 0 11315 89 4 0 chr5 18004812 18006368 -181623782 + THE1B-int LTR MaLR 1 1562 -18 4434 210 15 41 chr5 18006375 18007405 -181622745 - L1PA11 LINE L1 -6576 1005 3 432 217 42 28 chr5 18007440 18007583 -181622567 - L1MA9 LINE L1 -25 6287 6143 1028 148 0 13 chr5 18007589 18007744 -181622406 + AluJb SINE Alu 142 294 -18 1256 172 96 98 chr5 18008047 18008413 -181621737 + MLT1A1 LTR MaLR 1 365 0 1512 190 133 12 chr5 18008419 18008819 -181621331 + MER39 LTR ERV1 260 707 0 419 307 101 51 chr5 18008829 18009204 -181620946 + L1ME LINE L1 5394 5665 -456 737 236 39 0 chr5 18009205 18009387 -181620763 + AluJo SINE Alu 120 308 -4 1060 125 20 50 chr5 18010200 18010400 -181619750 - MER31A LTR ERV1 -291 194 1 708 139 23 8 chr5 18011125 18011254 -181618896 - MER20 DNA MER1_type -59 160 30 477 165 72 0 chr5 18011863 18011960 -181618190 - MER58C DNA MER1_type 0 215 112 233 174 0 0 chr5 18012128 18012174 -181617976 + MER39 LTR ERV1 1 46 -661 290 291 39 0 chr5 18012201 18012333 -181617817 + MER39 LTR ERV1 115 387 -320 3271 28 0 3 chr5 18012348 18012736 -181617414 - L1PA5 LINE L1 -12 6142 5756 2194 95 3 10 chr5 18013494 18013790 -181616360 - AluSx SINE Alu -14 298 5 226 211 28 70 chr5 18014220 18014291 -181615859 - L2 LINE L2 -4 3268 3201 628 109 10 0 chr5 18014716 18014817 -181615333 - L1MB4 LINE L1 -2 6178 6077 619 273 66 0 chr5 18014934 18015176 -181614974 + MIR SINE MIR 5 262 0 297 319 7 44 chr5 18015267 18015402 -181614748 - L2 LINE L2 -1 3312 3183 1195 171 0 5 chr5 18016178 18016377 -181613773 - AluJb SINE Alu -8 304 107 228 290 32 0 chr5 18016441 18016503 -181613647 + L2 LINE L2 2985 3048 -224 217 380 36 36 chr5 18017613 18017750 -181612400 - L2 LINE L2 0 3272 3136 2209 97 0 35 chr5 18018693 18019003 -181611147 - AluSq SINE Alu -14 299 1 921 289 81 41 chr5 18019067 18019556 -181610594 - L2 LINE L2 -345 2927 2421 221 313 30 0 chr5 18020780 18020847 -181609303 + MIR SINE MIR 74 142 -120 329 313 104 65 chr5 18021498 18022088 -181608062 + L1M2 LINE L1 790 1254 -5595 210 37 0 0 chr5 18022278 18022305 -181607845 + (CCG)n Simple_repeat Simple_repeat 1 27 0 305 271 170 90 chr5 18022308 18022812 -181607338 - L1M2 LINE L1 -5827 1022 525 861 254 37 18 chr5 18026116 18026333 -181603817 - MIR SINE MIR -34 228 8 790 275 140 25 chr5 18026470 18026914 -181603236 - MLT1G1 LTR MaLR -11 584 90 594 331 6 0 chr5 18027823 18027995 -181602155 + MIR SINE MIR 84 256 -6 1010 227 106 11 chr5 18030042 18030324 -181599826 - MER58B DNA MER1_type -1 340 32 1328 13 0 0 chr5 18030503 18030676 -181599474 + L1PA2 LINE L1 5992 6164 0 348 285 66 40 chr5 18033893 18034044 -181596106 - L2 LINE L2 -1 3312 3158 1122 232 37 92 chr5 18034099 18034587 -181595563 + MLT2B1 LTR ERVL 1 461 -59 198 0 0 0 chr5 18034587 18034609 -181595541 + (CA)n Simple_repeat Simple_repeat 2 23 0 503 177 0 0 chr5 18034618 18034697 -181595453 + Tigger5 DNA MER2_type 1 79 -2244 236 244 0 0 chr5 18034789 18034834 -181595316 + (CA)n Simple_repeat Simple_repeat 1 45 0 291 146 0 0 chr5 18034834 18034882 -181595268 + MLT2D LTR ERVL 367 414 0 270 294 0 0 chr5 18034885 18034970 -181595180 + L1MC3 LINE L1 6487 6571 -1214 208 283 12 24 chr5 18034979 18035145 -181595005 + (TA)n Simple_repeat Simple_repeat 1 164 0 2350 181 145 124 chr5 18035397 18035854 -181594296 + L1MC3 LINE L1 6583 7029 -756 284 56 0 0 chr5 18035854 18035890 -181594260 + tRNA-Gly-GGG tRNA tRNA 1 36 -38 2350 181 145 124 chr5 18035890 18035904 -181594246 + L1MC3 LINE L1 7029 7041 -744 246 219 151 0 chr5 18035904 18035977 -181594173 + MLT1F1 LTR MaLR 36 119 -448 2350 181 145 124 chr5 18035977 18036559 -181593591 + L1MC3 LINE L1 7041 7768 -17 537 313 156 8 chr5 18036602 18037078 -181593072 - L2 LINE L2 -248 3065 2508 700 204 20 70 chr5 18037327 18037528 -181592622 - MLT1A1 LTR MaLR -174 191 1 582 220 24 6 chr5 18037528 18037696 -181592454 - L1M4 LINE L1 -3763 2383 2213 268 308 117 25 chr5 18038201 18038321 -181591829 + MIR SINE MIR 2 132 -130 434 284 101 51 chr5 18038475 18038732 -181591418 - L2 LINE L2 0 3313 3044 21 0 0 0 chr5 18039095 18039116 -181591034 + AT_rich Low_complexity Low_complexity 1 21 0 1238 56 0 12 chr5 18040041 18040203 -181589947 + L1PA5 LINE L1 5989 6148 -6 23 33 0 0 chr5 18040786 18040816 -181589334 + AT_rich Low_complexity Low_complexity 1 30 0 267 187 58 23 chr5 18040816 18041037 -181589113 + (TA)n Simple_repeat Simple_repeat 1 228 0 21 57 0 0 chr5 18042033 18042068 -181588082 + AT_rich Low_complexity Low_complexity 1 35 0 268 207 0 0 chr5 18042068 18042126 -181588024 + Charlie1 DNA MER1_type 2180 2237 -524 984 164 11 5 chr5 18042141 18042330 -181587820 - L1MA8 LINE L1 -6 6285 6096 1546 72 36 18 chr5 18042330 18042551 -181587599 + L1PA10 LINE L1 5942 6167 -1 4954 176 80 3 chr5 18042553 18044185 -181585965 - L1MA4 LINE L1 -180 6120 4349 1827 162 55 0 chr5 18044278 18044606 -181585544 + MER7A DNA MER2_type 1 344 -2 197 273 55 0 chr5 18045456 18045511 -181584639 - MIR SINE MIR 0 262 205 28 0 0 0 chr5 18045805 18045833 -181584317 + AT_rich Low_complexity Low_complexity 1 28 0 398 277 73 55 chr5 18046315 18046589 -181583561 - L1MC/D LINE L1 -2213 5595 5317 310 280 84 38 chr5 18046772 18047011 -181583139 - L1MC/D LINE L1 -3314 2832 2583 966 240 68 84 chr5 18047086 18047599 -181582551 - MLT1J LTR MaLR -2 509 5 515 85 12 0 chr5 18048069 18048151 -181581999 + (CA)n Simple_repeat Simple_repeat 2 84 0 438 282 26 48 chr5 18048343 18048570 -181581580 + L1MC/D LINE L1 5602 5823 -298 1257 264 49 3 chr5 18049584 18049951 -181580199 - L1ME3 LINE L1 -1 6161 5778 501 290 0 26 chr5 18050073 18050228 -181579922 - MLT1H LTR MaLR -377 172 22 634 255 31 0 chr5 18050245 18050406 -181579744 - L1ME3 LINE L1 -545 5625 5460 232 232 0 0 chr5 18050934 18050990 -181579160 + (TCTCTG)n Simple_repeat Simple_repeat 2 57 0 619 265 55 38 chr5 18052266 18052504 -181577646 + MIR SINE MIR 15 256 -6 212 143 0 0 chr5 18052789 18052824 -181577326 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 186 222 22 0 chr5 18053152 18053197 -181576953 - L3 LINE CR1 -16 1561 1516 184 264 139 14 chr5 18053193 18053265 -181576885 - MIR SINE MIR -112 96 16 * 1180 176 106 100 chr5 18054202 18054561 -181575589 - MLT1A1 LTR MaLR -4 361 1 505 246 8 25 chr5 18054562 18054684 -181575466 - L1MC3 LINE L1 -535 7250 7131 328 312 71 24 chr5 18055555 18055725 -181574425 - MIR SINE MIR 0 262 85 2139 76 0 129 chr5 18056730 18057086 -181573064 + AluSp SINE Alu 1 310 -3 216 0 0 0 chr5 18057986 18058010 -181572140 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 318 232 121 10 chr5 18058418 18058517 -181571633 + L2 LINE L2 3190 3299 -14 215 163 82 0 chr5 18058801 18058850 -181571300 + MIR SINE MIR 209 261 -1 228 273 82 59 chr5 18059033 18059253 -181570897 - L1 LINE L1 -2379 3767 3543 445 289 88 63 chr5 18059447 18059845 -181570305 - L1 LINE L1 -2999 3147 2740 308 345 49 30 chr5 18060020 18060287 -181569863 - L1 LINE L1 -3653 2493 2222 2691 120 3 8 chr5 18060287 18060653 -181569497 - THE1B LTR MaLR 0 364 1 10996 120 25 26 chr5 18060653 18062231 -181567919 - THE1B-int LTR MaLR 0 1580 5 2189 145 14 19 chr5 18062234 18062600 -181567550 - THE1B LTR MaLR 0 364 1 25 51 0 0 chr5 18062713 18062752 -181567398 + AT_rich Low_complexity Low_complexity 1 39 0 318 87 0 0 chr5 18063274 18063320 -181566830 + (TG)n Simple_repeat Simple_repeat 1 46 0 198 0 0 0 chr5 18063319 18063341 -181566809 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 454 249 142 31 chr5 18063341 18063602 -181566548 - L1ME4a LINE L1 -84 6037 5748 806 210 160 70 chr5 18063768 18064095 -181566055 - MSTD LTR MaLR -10 386 1 400 274 55 33 chr5 18064119 18064387 -181565763 - L1ME4a LINE L1 -775 5569 5290 1356 139 86 0 chr5 18064405 18064614 -181565536 - MER30 DNA MER1_type 0 230 4 234 91 0 0 chr5 18064652 18064685 -181565465 + (TG)n Simple_repeat Simple_repeat 2 34 0 1364 230 168 59 chr5 18064728 18065223 -181564927 - MLT1H LTR MaLR 0 549 1 502 307 68 6 chr5 18066684 18066860 -181563290 - MIR3 SINE MIR -15 193 7 294 29 0 0 chr5 18068131 18068166 -181561984 + (TG)n Simple_repeat Simple_repeat 2 36 0 201 133 0 0 chr5 18069638 18069668 -181560482 + (CA)n Simple_repeat Simple_repeat 1 30 0 341 362 7 7 chr5 18070439 18070580 -181559570 - LTR33 LTR ERVL -270 251 111 379 0 0 38 chr5 18072777 18072830 -181557320 + (CA)n Simple_repeat Simple_repeat 2 52 0 1117 276 59 10 chr5 18073224 18073630 -181556520 + Charlie7 DNA MER1_type 261 686 -1926 1898 168 32 69 chr5 18074912 18075317 -181554833 - MLT1B LTR MaLR 0 390 1 850 326 84 26 chr5 18075481 18075910 -181554240 - L2 LINE L2 -5 3308 2855 1271 205 266 7 chr5 18075912 18076314 -181553836 - MLT1H LTR MaLR 0 549 1 520 268 102 61 chr5 18076314 18076609 -181553541 - L2 LINE L2 -456 2858 2552 366 286 64 36 chr5 18076639 18076779 -181553371 + L2 LINE L2 3168 3311 -2 1762 112 14 22 chr5 18077540 18077818 -181552332 - AluSx SINE Alu 0 312 37 380 348 43 19 chr5 18078092 18078302 -181551848 + L2 LINE L2 2270 2484 -830 269 329 172 20 chr5 18078315 18078716 -181551434 + L2 LINE L2 2619 3069 -203 785 188 0 0 chr5 18078963 18079096 -181551054 - FLAM_A SINE Alu 0 133 1 2375 88 3 0 chr5 18080780 18081074 -181549076 + AluSq SINE Alu 3 297 -16 950 147 0 0 chr5 18081915 18082044 -181548106 + FLAM_C SINE Alu 1 129 -4 3078 112 73 36 chr5 18082490 18083051 -181547099 + L1MA4 LINE L1 5713 6294 -6 1532 169 156 29 chr5 18083663 18083977 -181546173 - THE1A LTR MaLR -1 354 1 10467 91 7 94 chr5 18083977 18085707 -181544443 - THE1B-int LTR MaLR 0 1580 1 2072 122 96 35 chr5 18085707 18086050 -181544100 - THE1B LTR MaLR 0 364 1 343 193 121 0 chr5 18086205 18086288 -181543862 + MIR3 SINE MIR 77 169 -39 30 45 0 0 chr5 18086601 18086645 -181543505 + AT_rich Low_complexity Low_complexity 1 44 0 3337 212 87 16 chr5 18086943 18087713 -181542437 - MER21B LTR ERV1 -17 846 22 342 0 0 0 chr5 18087714 18087752 -181542398 + (TG)n Simple_repeat Simple_repeat 2 39 0 361 234 114 0 chr5 18087784 18087920 -181542230 - MIR SINE MIR -62 146 27 4975 126 34 68 chr5 18088455 18089310 -181540840 - LTR1B LTR ERV1 0 826 1 1202 205 23 5 chr5 18090011 18090197 -181539953 - MER20 DNA MER1_type 0 219 27 180 0 0 0 chr5 18090197 18090217 -181539933 + (TAGGG)n Simple_repeat Simple_repeat 1 20 0 1202 205 23 5 chr5 18090217 18090245 -181539905 - MER20 DNA MER1_type -192 27 1 205 349 63 0 chr5 18090401 18090464 -181539686 - L2 LINE L2 -85 3187 3121 426 251 184 39 chr5 18091861 18091910 -181538240 - MIR SINE MIR -11 251 210 261 0 0 0 chr5 18091910 18091939 -181538211 + (TG)n Simple_repeat Simple_repeat 2 30 0 426 251 184 39 chr5 18091939 18092096 -181538054 - MIR SINE MIR -52 210 15 208 139 0 0 chr5 18092117 18092153 -181537997 + (A)n Simple_repeat Simple_repeat 1 36 0 729 129 22 29 chr5 18092360 18092499 -181537651 - L1MB8 LINE L1 -6 6172 6035 276 227 15 0 chr5 18092639 18092705 -181537445 - MIR3 SINE MIR -16 192 126 573 258 92 37 chr5 18092812 18093298 -181536852 - MLT1G1 LTR MaLR -40 515 1 518 279 29 0 chr5 18093896 18094036 -181536114 - LTR1B LTR ERV1 -8 818 675 1798 208 129 15 chr5 18094084 18094555 -181535595 - LTR1B LTR ERV1 -301 525 1 1178 57 0 0 chr5 18095469 18095609 -181534541 - AluY SINE Alu -20 291 152 2742 267 75 29 chr5 18097895 18098065 -181532085 - L1M4 LINE L1 -1646 4500 4339 2227 115 0 3 chr5 18098065 18098369 -181531781 - AluSx SINE Alu -9 303 1 2742 267 75 29 chr5 18098369 18099353 -181530797 - L1M4 LINE L1 -1807 4339 3292 210 316 77 48 chr5 18101114 18101282 -181528868 - L2 LINE L2 -175 3097 2925 1109 217 4 17 chr5 18101720 18101950 -181528200 + MIR SINE MIR 1 227 -35 27 49 0 0 chr5 18101977 18102018 -181528132 + AT_rich Low_complexity Low_complexity 1 41 0 312 120 0 0 chr5 18102259 18102309 -181527841 + (CA)n Simple_repeat Simple_repeat 2 51 0 195 42 0 0 chr5 18104049 18104073 -181526077 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1541 68 41 0 chr5 18104073 18104294 -181525856 - L1PA8 LINE L1 -22 6150 5921 180 163 0 0 chr5 18104591 18104634 -181525516 + GA-rich Low_complexity Low_complexity 1 43 0 572 179 86 0 chr5 18106713 18106830 -181523320 + MER5A DNA MER1_type 61 187 -2 274 227 231 28 chr5 18106854 18106959 -181523191 + MIR SINE MIR 31 141 -67 204 216 0 0 chr5 18107190 18107227 -181522923 + CT-rich Low_complexity Low_complexity 4 40 0 275 394 117 0 chr5 18108397 18108534 -181521616 - L2 LINE L2 -9 3263 3111 719 216 122 0 chr5 18109149 18109330 -181520820 + MER3 DNA MER1_type 1 203 -6 237 143 71 0 chr5 18109293 18109335 -181520815 - MER3 DNA MER1_type -119 90 46 * 229 305 8 31 chr5 18110672 18110800 -181519350 - L1ME LINE L1 -334 5787 5663 2451 57 40 0 chr5 18110838 18111136 -181519014 - AluY SINE Alu 0 311 2 22 35 0 0 chr5 18111375 18111404 -181518746 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr5 18111589 18111619 -181518531 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5 18112023 18112051 -181518099 + AT_rich Low_complexity Low_complexity 1 28 0 2254 118 0 0 chr5 18112142 18112447 -181517703 - AluSx SINE Alu -7 305 1 1169 231 111 0 chr5 18115245 18115552 -181514598 + MER58B DNA MER1_type 1 341 0 685 293 67 9 chr5 18118419 18118644 -181511506 - MIR SINE MIR 0 262 25 405 303 43 32 chr5 18119980 18120168 -181509982 + MIR3 SINE MIR 2 191 -17 203 349 75 0 chr5 18121640 18121746 -181508404 - L2 LINE L2 -827 2487 2374 2563 220 9 5 chr5 18122344 18122986 -181507164 - L1 LINE L1 -2890 3256 2612 233 226 38 9 chr5 18123223 18123329 -181506821 + (TA)n Simple_repeat Simple_repeat 1 109 0 977 190 7 108 chr5 18124214 18124312 -181505838 - MLT1A2 LTR MaLR -109 265 159 333 0 0 0 chr5 18124312 18124349 -181505801 + (CA)n Simple_repeat Simple_repeat 2 38 0 977 190 7 108 chr5 18124349 18124545 -181505605 - MLT1A2 LTR MaLR -215 159 1 226 300 120 0 chr5 18124648 18124748 -181505402 + MIR SINE MIR 49 160 -102 1197 80 0 0 chr5 18124760 18124910 -181505240 + AluY SINE Alu 160 309 -2 292 287 21 21 chr5 18124921 18125015 -181505135 + MIR SINE MIR 153 246 -16 380 381 44 15 chr5 18127664 18127934 -181502216 - L1ME3A LINE L1 -299 5871 5594 659 305 5 15 chr5 18128317 18128520 -181501630 + MIR SINE MIR 11 211 -51 247 290 16 0 chr5 18128570 18128632 -181501518 - L2 LINE L2 -12 3301 3239 245 270 16 16 chr5 18128697 18128760 -181501390 + L2 LINE L2 3210 3272 0 180 0 0 0 chr5 18131325 18131345 -181498805 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 222 37 0 0 chr5 18131344 18131371 -181498779 + (CA)n Simple_repeat Simple_repeat 1 27 0 1859 138 76 3 chr5 18131459 18131750 -181498400 + AluSx SINE Alu 1 312 0 2158 123 0 3 chr5 18132681 18132983 -181497167 - AluSx SINE Alu -7 305 5 204 118 29 0 chr5 18133230 18133264 -181496886 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 1838 130 7 43 chr5 18133265 18133565 -181496585 - AluSx SINE Alu -23 289 1 204 172 31 31 chr5 18133739 18133803 -181496347 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 2302 105 0 7 chr5 18134138 18134443 -181495707 + AluSg SINE Alu 1 303 -7 1836 121 37 7 chr5 18134557 18134829 -181495321 - AluSq SINE Alu -6 307 28 185 292 104 97 chr5 18135693 18135981 -181494169 - L2 LINE L2 -56 3216 2927 2269 99 79 15 chr5 18136008 18136350 -181493800 + THE1B LTR MaLR 1 364 0 254 333 0 0 chr5 18136506 18136584 -181493566 - L2 LINE L2 -990 2324 2247 514 256 78 57 chr5 18136647 18136877 -181493273 - L2 LINE L2 -1240 2074 1840 240 318 88 31 chr5 18137043 18137235 -181492915 - L2 LINE L2 -1723 1591 1389 701 309 82 10 chr5 18137237 18137528 -181492622 + L2 LINE L2 2326 2637 -677 1308 231 99 12 chr5 18137536 18137961 -181492189 + MLT1C LTR MaLR 6 467 0 775 266 171 37 chr5 18137964 18138552 -181491598 + L2 LINE L2 2650 3313 0 197 296 0 0 chr5 18138909 18138953 -181491197 + MIR3 SINE MIR 148 191 -17 252 213 0 0 chr5 18138977 18139038 -181491112 + CT-rich Low_complexity Low_complexity 1 61 0 2055 212 48 6 chr5 18140177 18140659 -181489491 - MLT1D LTR MaLR -1 504 3 303 305 0 0 chr5 18141282 18141364 -181488786 + L1MC4 LINE L1 6622 6703 -1339 1859 108 114 6 chr5 18141371 18141705 -181488445 + MSTA LTR MaLR 59 428 0 663 351 130 11 chr5 18141739 18142201 -181487949 + L2 LINE L2 2371 2887 -427 1264 231 14 67 chr5 18142987 18143317 -181486833 - L1ME2 LINE L1 -70 6094 5791 2477 58 0 0 chr5 18143317 18143612 -181486538 + AluY SINE Alu 1 295 -16 1264 231 14 67 chr5 18143612 18143713 -181486437 - L1ME2 LINE L1 -373 5791 5686 390 215 51 0 chr5 18143880 18144038 -181486112 - L1ME2 LINE L1 -1679 4467 4302 1007 243 33 52 chr5 18144145 18144196 -181485954 - L1ME2 LINE L1 -3015 3131 3081 2366 97 0 3 chr5 18144196 18144506 -181485644 - AluSq SINE Alu -4 309 1 1007 243 33 52 chr5 18144506 18144554 -181485596 - L1ME2 LINE L1 -3065 3081 3034 2096 114 7 16 chr5 18144554 18144861 -181485289 - AluJb SINE Alu -8 304 1 1007 243 33 52 chr5 18144861 18145184 -181484966 - L1ME2 LINE L1 -3112 3034 2716 843 246 189 15 chr5 18145186 18145610 -181484540 - MLT1H LTR MaLR -1 548 14 435 251 31 25 chr5 18145760 18145923 -181484227 - L1ME2 LINE L1 -3607 2539 2376 391 169 0 0 chr5 18146011 18146082 -181484068 - MER93b LTR ERV1 -111 262 192 865 198 6 0 chr5 18146116 18146273 -181483877 + MER93b LTR ERV1 1 158 -215 481 174 0 11 chr5 18146278 18146370 -181483780 + MER93b LTR ERV1 270 360 -13 2103 137 0 3 chr5 18146459 18146766 -181483384 - AluSx SINE Alu -6 306 1 440 220 0 0 chr5 18146836 18146927 -181483223 - MLT1D LTR MaLR -414 91 1 1259 109 139 0 chr5 18147234 18147436 -181482714 + MER30 DNA MER1_type 1 230 0 926 278 57 44 chr5 18148785 18149122 -181481028 + MER115 DNA AcHobo 1 332 -361 2509 108 17 8 chr5 18149122 18149483 -181480667 - THE1B LTR MaLR 0 364 1 926 278 57 44 chr5 18149483 18149776 -181480374 + MER115 DNA AcHobo 332 693 0 266 270 16 0 chr5 18149885 18149948 -181480202 + MIR SINE MIR 40 103 -159 1722 274 82 9 chr5 18150036 18150583 -181479567 - MLT1G1 LTR MaLR -2 593 7 318 265 99 26 chr5 18151231 18151382 -181478768 + MIR SINE MIR 101 262 0 2068 129 7 7 chr5 18154859 18155154 -181474996 + AluSx SINE Alu 3 297 -15 281 276 67 19 chr5 18155160 18155265 -181474885 - L2 LINE L2 0 3313 3204 684 309 39 4 chr5 18155566 18155796 -181474354 + MIR SINE MIR 20 257 -5 3237 110 20 22 chr5 18155854 18156353 -181473797 + L1MA4 LINE L1 5411 5908 -395 348 24 0 0 chr5 18156781 18156822 -181473328 + (CA)n Simple_repeat Simple_repeat 1 41 0 2252 151 29 0 chr5 18156822 18157199 -181472951 + L1MA4 LINE L1 5913 6300 0 294 189 18 41 chr5 18158009 18158178 -181471972 + (TCTA)n Simple_repeat Simple_repeat 4 168 0 458 319 83 6 chr5 18158338 18158507 -181471643 - MIR SINE MIR -15 247 66 24 53 0 0 chr5 18158557 18158595 -181471555 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr5 18158985 18159010 -181471140 + AT_rich Low_complexity Low_complexity 1 25 0 250 125 100 113 chr5 18159240 18159320 -181470830 + MIR SINE MIR 67 145 -63 21 36 0 0 chr5 18159397 18159425 -181470725 + AT_rich Low_complexity Low_complexity 1 28 0 275 273 71 30 chr5 18159738 18159837 -181470313 - L2 LINE L2 -3 3269 3167 219 362 38 0 chr5 18160260 18160365 -181469785 + MIR SINE MIR 102 210 -52 236 329 12 12 chr5 18161571 18161653 -181468497 + MIR3 SINE MIR 75 156 -52 474 352 6 6 chr5 18161663 18161842 -181468308 - MER117 DNA MER1_type -18 179 1 1951 146 42 74 chr5 18162922 18163325 -181466825 - MLT1B LTR MaLR 0 390 1 328 207 155 78 chr5 18163350 18163466 -181466684 - MIR SINE MIR -46 216 92 614 159 0 0 chr5 18163524 18163612 -181466538 + 5S rRNA rRNA 2 89 -32 2282 109 0 6 chr5 18163793 18164105 -181466045 - AluSq SINE Alu -3 310 1 949 230 82 62 chr5 18165967 18166196 -181463954 - MLT1A1 LTR MaLR -2 363 123 2380 107 41 39 chr5 18166196 18166559 -181463591 + THE1B LTR MaLR 1 364 0 949 230 82 62 chr5 18166559 18166685 -181463465 - MLT1A1 LTR MaLR -242 123 1 197 290 20 70 chr5 18166773 18166873 -181463277 - MIR SINE MIR -6 256 162 259 200 0 18 chr5 18168330 18168385 -181461765 + MIR SINE MIR 20 73 -189 2290 88 0 7 chr5 18168862 18169156 -181460994 - AluSc SINE Alu -17 292 1 731 224 141 21 chr5 18169239 18169431 -181460719 - MIR SINE MIR -43 219 5 2604 170 73 20 chr5 18170274 18170768 -181459382 + MLT2B1 LTR ERVL 1 520 0 207 266 0 47 chr5 18171490 18171554 -181458596 - L3 LINE CR1 -7 1570 1510 262 128 0 0 chr5 18171944 18171983 -181458167 - MSTB LTR MaLR 0 428 390 2333 104 3 0 chr5 18171983 18172314 -181457836 + AluSg SINE Alu 1 332 0 1928 168 29 70 chr5 18172314 18172730 -181457420 - MSTB LTR MaLR -27 399 1 564 310 27 11 chr5 18174444 18174631 -181455519 - MIR SINE MIR -50 212 23 382 244 49 0 chr5 18175365 18175488 -181454662 + MLT1D-int LTR MaLR 1243 1371 0 1612 249 70 33 chr5 18175488 18175975 -181454175 + MLT1D LTR MaLR 1 505 0 545 275 154 20 chr5 18175975 18176280 -181453870 + MLT1J1 LTR MaLR 101 446 0 614 104 10 0 chr5 18176589 18176685 -181453465 + (TCCA)n Simple_repeat Simple_repeat 1 97 0 241 231 0 0 chr5 18176685 18176737 -181453413 + (CCTA)n Simple_repeat Simple_repeat 1 52 0 229 204 0 0 chr5 18176778 18176827 -181453323 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 282 335 48 18 chr5 18177015 18177182 -181452968 - L2 LINE L2 -289 2983 2812 25 0 0 0 chr5 18177259 18177284 -181452866 + AT_rich Low_complexity Low_complexity 1 25 0 715 258 108 104 chr5 18179961 18180468 -181449682 - LTR67 LTR ERVL -26 531 23 279 0 0 0 chr5 18180469 18180500 -181449650 + (GA)n Simple_repeat Simple_repeat 2 32 0 645 305 26 26 chr5 18182118 18182387 -181447763 + MARNA DNA Mariner 299 567 -19 217 347 104 7 chr5 18182391 18182535 -181447615 - L3b LINE CR1 -118 1465 1308 393 296 85 40 chr5 18182549 18182725 -181447425 - MIR SINE MIR -71 191 8 14706 148 48 6 chr5 18183077 18185279 -181444871 + Tigger1 DNA MER2_type 1 2306 -112 2289 96 7 0 chr5 18185279 18185580 -181444570 - AluY SINE Alu -8 303 1 14706 148 48 6 chr5 18185580 18185698 -181444452 + Tigger1 DNA MER2_type 2306 2418 0 2426 203 52 74 chr5 18186278 18186910 -181443240 - MLT1E2 LTR MaLR -8 618 1 271 228 13 148 chr5 18187125 18187274 -181442876 + MLT1H LTR MaLR 421 549 0 333 356 42 6 chr5 18187398 18187579 -181442571 + MIR SINE MIR 17 204 -58 264 350 50 0 chr5 18187604 18187724 -181442426 - L2 LINE L2 -6 3307 3182 384 178 0 0 chr5 18187799 18187872 -181442278 + CT-rich Low_complexity Low_complexity 2 74 0 259 216 0 0 chr5 18189880 18189931 -181440219 + L2 LINE L2 3262 3312 -1 1764 181 3 0 chr5 18189993 18190291 -181439859 + AluSx SINE Alu 1 299 -13 451 355 42 21 chr5 18190773 18190962 -181439188 - MER91A DNA MER1_type -3 193 1 433 293 80 42 chr5 18191636 18191875 -181438275 + MIR SINE MIR 15 262 0 771 292 138 6 chr5 18193362 18193416 -181436734 - LTR16A LTR ERVL 0 450 404 216 23 0 68 chr5 18193416 18193460 -181436690 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 771 292 138 6 chr5 18193460 18193717 -181436433 - LTR16A LTR ERVL -46 404 98 5147 167 41 4 chr5 18194190 18195111 -181435039 + L1MA4 LINE L1 5345 6299 -1 1412 244 6 9 chr5 18195099 18195444 -181434706 + L1MA9 LINE L1 5931 6274 -38 * 2165 128 0 0 chr5 18195455 18195752 -181434398 - AluSc SINE Alu -12 297 1 601 274 42 12 chr5 18195768 18195936 -181434214 + MLT1A2 LTR MaLR 156 328 -46 494 299 0 17 chr5 18196643 18196820 -181433330 - MIR SINE MIR 0 262 89 209 346 45 45 chr5 18197171 18197327 -181432823 + L3 LINE CR1 137 292 -1285 315 326 131 18 chr5 18197597 18197879 -181432271 + L2 LINE L2 2995 3308 -5 182 263 229 8 chr5 18197848 18197966 -181432184 + L3 LINE CR1 957 1100 -477 * 190 321 15 73 chr5 18198207 18198344 -181431806 + L3 LINE CR1 1301 1429 -148 211 308 103 13 chr5 18199975 18200053 -181430097 + L2 LINE L2 3188 3272 0 21 0 0 0 chr5 18200878 18200899 -181429251 + AT_rich Low_complexity Low_complexity 1 21 0 1071 186 64 0 chr5 18200965 18201169 -181428981 - MER20 DNA MER1_type 0 219 3 186 233 0 0 chr5 18202252 18202295 -181427855 - L2 LINE L2 0 3313 3271 279 260 73 31 chr5 18202601 18202697 -181427453 - MER5B DNA MER1_type -78 100 1 601 195 9 9 chr5 18202705 18202818 -181427332 - MER5B DNA MER1_type 0 178 66 526 261 28 28 chr5 18202847 18202989 -181427161 + MER5B DNA MER1_type 1 142 -36 185 277 134 45 chr5 18203398 18203510 -181426640 + MIR3 SINE MIR 1 122 -86 326 261 104 0 chr5 18204253 18204368 -181425782 - MER63 DNA MER1_type -309 753 1 9422 217 48 27 chr5 18204446 18208241 -181421909 + L1MA9 LINE L1 971 4687 -1861 1775 116 4 0 chr5 18208241 18208483 -181421667 + AluSx SINE Alu 37 279 -33 9422 217 48 27 chr5 18208483 18209549 -181420601 + L1MA9 LINE L1 4687 6059 -489 261 0 0 0 chr5 18209549 18209578 -181420572 + (CA)n Simple_repeat Simple_repeat 2 30 0 9422 217 48 27 chr5 18209578 18210074 -181420076 + L1MA9 LINE L1 6059 6543 -5 2242 78 51 3 chr5 18210986 18211282 -181418868 + AluY SINE Alu 1 310 -1 226 216 0 0 chr5 18212268 18212319 -181417831 - L1ME4a LINE L1 -69 6052 6002 258 239 15 112 chr5 18212341 18212475 -181417675 - MLT1H LTR MaLR -1 548 428 201 204 0 20 chr5 18212779 18212828 -181417322 + (TA)n Simple_repeat Simple_repeat 1 48 0 314 222 33 22 chr5 18212829 18212919 -181417231 + L1MC4 LINE L1 6613 6703 -1339 300 289 52 0 chr5 18212930 18213027 -181417123 + MIR SINE MIR 151 252 -10 1614 176 35 26 chr5 18213033 18213373 -181416777 + MLT1A2 LTR MaLR 1 343 -31 444 264 111 57 chr5 18213408 18213652 -181416498 - L1ME4a LINE L1 -248 5873 5600 575 250 9 0 chr5 18213937 18214053 -181416097 - FLAM_A SINE Alu -16 117 1 243 281 75 38 chr5 18214525 18214685 -181415465 - HAL1 LINE L1 -715 1792 1627 210 250 21 0 chr5 18214932 18214980 -181415170 + CT-rich Low_complexity Low_complexity 4 52 0 289 304 29 74 chr5 18215086 18215329 -181414821 - MLT1J LTR MaLR -52 459 228 23 0 0 0 chr5 18216225 18216248 -181413902 + AT_rich Low_complexity Low_complexity 1 23 0 189 213 0 0 chr5 18216889 18216936 -181413214 + GA-rich Low_complexity Low_complexity 2 48 0 2238 239 33 26 chr5 18217199 18217846 -181412304 - L1MC4a LINE L1 -146 7653 6992 180 0 0 0 chr5 18217846 18217866 -181412284 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 2238 239 33 26 chr5 18217866 18218201 -181411949 - L1MC4a LINE L1 -807 6992 6661 1004 217 8 16 chr5 18218215 18218468 -181411682 - L1M4 LINE L1 -1366 5016 4766 2782 190 9 57 chr5 18219486 18219981 -181410169 - L1MB3 LINE L1 -2 6181 5728 2240 112 0 0 chr5 18219981 18220284 -181409866 + AluSx SINE Alu 6 308 -4 2782 190 9 57 chr5 18220284 18220489 -181409661 - L1MB3 LINE L1 -455 5728 5515 * 6025 159 30 30 chr5 18220487 18222104 -181408046 - L1M4 LINE L1 -3427 2955 1332 842 243 28 0 chr5 18222095 18222309 -181407841 + L1ME LINE L1 5496 5715 -451 * 233 213 0 43 chr5 18222452 18222499 -181407651 - L2 LINE L2 -82 3190 3146 228 260 55 27 chr5 18222672 18222745 -181407405 + MER5C DNA MER1_type 20 94 -230 23 33 0 0 chr5 18222811 18222841 -181407309 + AT_rich Low_complexity Low_complexity 1 30 0 452 156 67 22 chr5 18222850 18222985 -181407165 + L1MC4 LINE L1 7902 8042 0 21 0 0 0 chr5 18223032 18223053 -181407097 + AT_rich Low_complexity Low_complexity 1 21 0 1586 248 42 48 chr5 18223108 18223608 -181406542 - MLT1D LTR MaLR -5 500 4 232 404 57 10 chr5 18223646 18223943 -181406207 - L2 LINE L2 -452 2862 2552 314 198 49 35 chr5 18224098 18224226 -181405924 - MLT2F LTR ERVL -9 654 336 484 126 76 0 chr5 18224342 18224449 -181405701 - MLT1E3 LTR MaLR -446 208 46 376 272 0 76 chr5 18224448 18224606 -181405544 - MLT2F LTR ERVL -517 146 1 * 356 186 14 14 chr5 18226453 18226593 -181403557 + GA-rich Low_complexity Low_complexity 1 140 0 417 318 19 0 chr5 18227475 18227629 -181402521 + MLT2E LTR ERVL 3 159 -469 357 189 24 94 chr5 18227731 18227807 -181402343 + MLT2E LTR ERVL 504 570 -58 1990 127 3 0 chr5 18227807 18228120 -181402030 + AluSx SINE Alu 1 314 0 357 189 24 94 chr5 18228120 18228169 -181401981 + MLT2E LTR ERVL 570 621 -7 213 284 45 0 chr5 18228341 18228408 -181401742 - L2 LINE L2 -1 3312 3243 430 269 8 0 chr5 18228422 18228541 -181401609 + MER94 DNA DNA 2 121 -13 455 233 127 57 chr5 18229064 18229292 -181400858 + MIR SINE MIR 18 261 -1 1954 102 44 4 chr5 18230912 18231219 -181398931 - AluSx SINE Alu 0 318 1 549 270 138 50 chr5 18231718 18232005 -181398145 + LTR33 LTR ERVL 100 419 -102 1300 181 33 109 chr5 18232005 18232398 -181397752 - MLT1A1 LTR MaLR 0 365 3 549 270 138 50 chr5 18232398 18232428 -181397722 + LTR33 LTR ERVL 419 445 -76 7325 156 15 12 chr5 18232428 18233456 -181396694 - Tigger1 DNA MER2_type 0 2418 1395 2248 111 3 3 chr5 18233456 18233754 -181396396 + AluSq SINE Alu 1 298 -15 180 0 0 0 chr5 18233757 18233777 -181396373 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7325 156 15 12 chr5 18233777 18235099 -181395051 - Tigger1 DNA MER2_type -1024 1394 1 1306 168 54 19 chr5 18235123 18235451 -181394699 + MLT2C1 LTR ERVL 4 424 -37 311 287 17 17 chr5 18235451 18235566 -181394584 + (TATATG)n Simple_repeat Simple_repeat 3 117 0 2047 233 25 18 chr5 18235567 18236077 -181394073 - MLT2B3 LTR ERVL -40 514 1 790 210 74 0 chr5 18237720 18237896 -181392254 + MER5A DNA MER1_type 1 189 0 234 239 156 18 chr5 18238042 18238151 -181391999 - MIR SINE MIR -99 163 40 1240 200 42 93 chr5 18238660 18239045 -181391105 + MLT1A1 LTR MaLR 1 365 0 192 77 0 0 chr5 18239712 18239738 -181390412 + (CAGAA)n Simple_repeat Simple_repeat 1 26 0 423 230 52 63 chr5 18240771 18240945 -181389205 - MER34B LTR ERV1 0 565 394 354 194 0 0 chr5 18241216 18241283 -181388867 - MER34 LTR ERV1 -473 69 3 306 268 12 20 chr5 18241294 18241410 -181388740 - MIR SINE MIR -78 130 19 2107 173 10 18 chr5 18242793 18243186 -181386964 - MLT1B LTR MaLR 0 390 1 285 75 0 0 chr5 18243351 18243391 -181386759 + (ATG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 18243653 18243674 -181386476 + AT_rich Low_complexity Low_complexity 1 21 0 2161 108 0 26 chr5 18243907 18244212 -181385938 - AluSq SINE Alu -16 297 1 268 243 14 27 chr5 18244504 18244578 -181385572 + CT-rich Low_complexity Low_complexity 6 78 0 574 224 17 103 chr5 18244674 18244906 -181385244 + MLT1F1 LTR MaLR 7 218 -324 * 855 219 85 0 chr5 18244893 18245117 -181385033 + MLT1F1 LTR MaLR 323 565 -2 681 311 55 21 chr5 18245169 18245458 -181384692 + L2 LINE L2 3014 3312 -1 1666 245 66 32 chr5 18245977 18246500 -181383650 + L2 LINE L2 2451 3000 -313 2821 74 3 11 chr5 18246500 18246877 -181383273 + THE1C LTR MaLR 2 375 0 1666 245 66 32 chr5 18246877 18247040 -181383110 + L2 LINE L2 3000 3156 -157 213 244 0 0 chr5 18247066 18247111 -181383039 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 259 111 0 0 chr5 18247218 18247254 -181382896 - MER5A DNA MER1_type -150 39 4 914 176 11 11 chr5 18247265 18247452 -181382698 - MER3 DNA MER1_type -5 204 18 1021 166 0 6 chr5 18247467 18247648 -181382502 - MER3 DNA MER1_type -24 185 6 384 233 42 33 chr5 18247662 18247782 -181382368 + L2 LINE L2 3192 3312 -1 264 341 159 16 chr5 18247786 18247912 -181382238 + L2 LINE L2 3126 3269 -3 299 65 22 0 chr5 18249035 18249081 -181381069 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 2148 131 3 0 chr5 18251171 18251476 -181378674 + AluSx SINE Alu 1 306 -6 2132 137 0 13 chr5 18251563 18251878 -181378272 + AluSx SINE Alu 1 311 -1 1466 208 0 14 chr5 18253596 18253885 -181376265 + AluJb SINE Alu 2 286 -26 504 0 0 0 chr5 18253885 18253941 -181376209 + (TA)n Simple_repeat Simple_repeat 2 57 0 280 309 24 0 chr5 18254255 18254339 -181375811 + L2 LINE L2 3228 3313 0 192 296 182 0 chr5 18254412 18254500 -181375650 + L2 LINE L2 3201 3304 -9 2290 97 3 3 chr5 18254502 18254801 -181375349 - AluSc SINE Alu -9 300 2 488 79 53 0 chr5 18256346 18256422 -181373728 - MADE1 DNA Mariner 0 80 1 746 253 18 27 chr5 18256535 18256756 -181373394 + MER46C DNA MER2_type 19 237 -101 272 191 95 0 chr5 18258994 18259057 -181371093 - MIR SINE MIR -79 129 61 191 326 59 30 chr5 18261182 18261317 -181368833 + L2 LINE L2 2603 2741 -573 2777 152 57 50 chr5 18261542 18262162 -181367988 + L1MB2 LINE L1 5544 6167 -4 250 224 0 0 chr5 18263620 18263669 -181366481 + L1ME4a LINE L1 5967 6015 -106 296 175 16 0 chr5 18263740 18263803 -181366347 + (TA)n Simple_repeat Simple_repeat 2 65 0 341 24 0 0 chr5 18314448 18314489 -181315661 - L1PB1 LINE L1 -254 5897 5857 1830 73 30 0 chr5 18314489 18314712 -181315438 + L1PB1 LINE L1 5911 6151 0 1533 173 23 29 chr5 18314718 18314839 -181315311 + L1M2 LINE L1 5177 5297 -994 1059 139 0 0 chr5 18314839 18315019 -181315131 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1533 173 23 29 chr5 18315019 18315302 -181314848 + L1M2 LINE L1 5297 5573 -718 2323 151 64 25 chr5 18315848 18316252 -181313898 + MSTA LTR MaLR 5 424 -4 22 0 0 0 chr5 18316837 18316859 -181313291 + AT_rich Low_complexity Low_complexity 1 22 0 329 271 17 25 chr5 18316991 18317109 -181313041 + L2 LINE L2 3192 3308 -5 283 188 16 16 chr5 18317836 18317900 -181312250 - MER58B DNA MER1_type 0 341 278 937 231 25 59 chr5 18317910 18318230 -181311920 + MER92B LTR ERV1 326 634 -2 * 1708 210 103 2 chr5 18318230 18318629 -181311521 + Charlie1 DNA MER1_type 576 1015 -1746 369 186 76 25 chr5 18318628 18318746 -181311404 + Charlie1 DNA MER1_type 2638 2761 0 * 242 232 0 0 chr5 18318960 18319021 -181311129 + (TTA)n Simple_repeat Simple_repeat 1 61 0 395 267 0 27 chr5 18319155 18319301 -181310849 + T-rich Low_complexity Low_complexity 4 145 0 1952 191 127 54 chr5 18320298 18320943 -181309207 - LTR1B LTR ERV1 0 826 135 412 289 14 16 chr5 18321057 18321214 -181308936 + L1ME1 LINE L1 5452 5606 -560 416 284 0 18 chr5 18321214 18321543 -181308607 + (TATATG)n Simple_repeat Simple_repeat 1 322 0 225 267 23 23 chr5 18321568 18321654 -181308496 + L1MC4 LINE L1 6615 6700 -1342 229 157 47 93 chr5 18321657 18321829 -181308321 + (TATATG)n Simple_repeat Simple_repeat 6 169 0 468 245 0 33 chr5 18321848 18322032 -181308118 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 305 268 0 62 chr5 18322056 18322153 -181307997 + L1MC4 LINE L1 6615 6705 -1337 300 337 0 0 chr5 18322096 18322185 -181307965 - L1MC4 LINE L1 -1340 6702 6614 * 23 0 0 0 chr5 18322191 18322214 -181307936 + AT_rich Low_complexity Low_complexity 1 23 0 1710 227 79 48 chr5 18322227 18322452 -181307698 + L1ME1 LINE L1 5603 5819 -347 476 32 16 0 chr5 18322452 18322514 -181307636 + (CA)n Simple_repeat Simple_repeat 2 64 0 1710 227 79 48 chr5 18322514 18322830 -181307320 + L1ME1 LINE L1 5819 6161 -5 467 280 0 0 chr5 18323548 18323648 -181306502 - L2 LINE L2 -15 3298 3199 23 0 0 0 chr5 18323665 18323688 -181306462 + AT_rich Low_complexity Low_complexity 1 23 0 2505 65 0 3 chr5 18323790 18324099 -181306051 - AluY SINE Alu -3 308 1 2276 81 3 0 chr5 18326580 18326886 -181303264 + AluSp SINE Alu 1 307 0 1412 238 59 0 chr5 18328119 18328439 -181301711 + MER58B DNA MER1_type 1 339 -2 2475 169 24 10 chr5 18328763 18329178 -181300972 + MSTB LTR MaLR 1 421 -5 564 321 205 3 chr5 18329184 18329570 -181300580 + L2 LINE L2 2199 2662 -652 1322 154 9 9 chr5 18330734 18330967 -181299183 + LTR1 LTR ERV1 1 233 -552 393 22 0 0 chr5 18331316 18331362 -181298788 + (CA)n Simple_repeat Simple_repeat 2 47 0 1863 163 3 3 chr5 18332245 18332534 -181297616 - AluSx SINE Alu -23 289 1 1766 170 35 84 chr5 18332753 18333006 -181297144 - MSTB1 LTR MaLR 0 432 209 3468 116 8 25 chr5 18333006 18333524 -181296626 - MER75 DNA T2_type -2 512 4 1766 170 35 84 chr5 18333524 18333724 -181296426 - MSTB1 LTR MaLR -223 209 1 2218 124 0 0 chr5 18334901 18335199 -181294951 + AluSx SINE Alu 2 299 -13 3130 37 3 0 chr5 18335256 18335610 -181294540 + L1PA5 LINE L1 5792 6146 -8 182 62 31 0 chr5 18335624 18335656 -181294494 + (TAAAAA)n Simple_repeat Simple_repeat 4 36 0 193 247 65 39 chr5 18335699 18335776 -181294374 - L2 LINE L2 -1 3312 3234 2315 97 0 25 chr5 18337356 18337677 -181292473 + AluSq SINE Alu 1 313 0 557 245 0 0 chr5 18337740 18337879 -181292271 - L1MB7 LINE L1 -52 6132 5994 1571 231 118 60 chr5 18338458 18339143 -181291007 + MER50 LTR ERV1 10 734 0 1772 110 91 19 chr5 18340157 18340465 -181289685 + AluSq SINE Alu 1 327 0 1222 184 14 5 chr5 18342425 18342642 -181287508 + MER20 DNA MER1_type 1 219 0 1196 201 94 6 chr5 18342796 18343311 -181286839 + MLT1E1 LTR MaLR 1 649 -5 2254 124 0 0 chr5 18343320 18343626 -181286524 + AluSx SINE Alu 5 310 -2 2194 138 58 6 chr5 18343765 18344112 -181286038 + MLT1A1 LTR MaLR 1 365 0 284 277 119 34 chr5 18344522 18344699 -181285451 + MIR3 SINE MIR 17 208 0 21 0 0 0 chr5 18344786 18344807 -181285343 + AT_rich Low_complexity Low_complexity 1 21 0 593 209 13 20 chr5 18345597 18345750 -181284400 - MER106B DNA MER1_type 0 1059 908 1922 156 13 7 chr5 18345879 18346186 -181283964 - AluJo SINE Alu -3 309 1 2816 222 52 21 chr5 18346190 18346821 -181283329 + MER82 DNA MER2_type 1 651 -2 550 252 50 71 chr5 18346889 18347127 -181283023 + MIR SINE MIR 23 255 -7 2252 108 44 36 chr5 18347659 18348019 -181282131 + THE1B LTR MaLR 2 364 0 478 171 12 0 chr5 18348477 18348559 -181281591 + MLT1F1 LTR MaLR 1 83 -484 277 197 155 0 chr5 18348563 18348634 -181281516 + MER5A DNA MER1_type 105 186 -3 223 336 43 29 chr5 18348809 18348949 -181281201 + MIR SINE MIR 11 152 -110 2126 130 19 82 chr5 18348997 18349421 -181280729 - MLT2C1 LTR ERVL 0 397 1 34 55 0 0 chr5 18349741 18349796 -181280354 + AT_rich Low_complexity Low_complexity 1 55 0 241 264 46 35 chr5 18351441 18351528 -181278622 - MER97b DNA MER1_type? -965 88 1 204 179 0 0 chr5 18351579 18351618 -181278532 + (TG)n Simple_repeat Simple_repeat 2 40 0 306 173 49 12 chr5 18351859 18351940 -181278210 - L1MA9 LINE L1 -22 6290 6207 2483 186 19 11 chr5 18352123 18352601 -181277549 - L1MB4 LINE L1 0 6180 5699 238 75 50 0 chr5 18353233 18353273 -181276877 + Alu SINE Alu 2 43 -90 303 216 0 0 chr5 18353373 18353449 -181276701 + AluS SINE Alu 228 303 0 588 169 0 0 chr5 18353617 18353706 -181276444 - AluSg/x SINE Alu -17 295 207 1538 169 4 0 chr5 18353706 18353942 -181276208 - AluSx SINE Alu -75 237 1 562 269 57 57 chr5 18354257 18354469 -181275681 + MIR SINE MIR 21 232 -30 1732 159 10 24 chr5 18354665 18354960 -181275190 + AluJo SINE Alu 9 299 -13 254 346 0 0 chr5 18355223 18355301 -181274849 + L2 LINE L2 3133 3210 -62 1620 224 35 13 chr5 18355563 18355938 -181274212 - MLT1C LTR MaLR -34 433 51 4764 143 22 7 chr5 18357285 18357996 -181272154 + MER72 LTR ERV1 1 722 0 195 330 74 74 chr5 18358032 18358208 -181271942 + MIR3 SINE MIR 10 185 -23 233 194 111 120 chr5 18359226 18359334 -181270816 + MLT1L LTR MaLR 427 533 -82 216 0 0 0 chr5 18360330 18360354 -181269796 + (T)n Simple_repeat Simple_repeat 1 24 0 3458 162 38 38 chr5 18360549 18361177 -181268973 - MER21B LTR ERV1 -24 839 212 635 167 0 10 chr5 18361345 18361447 -181268703 - FLAM_C SINE Alu -19 124 24 202 318 36 45 chr5 18361738 18361848 -181268302 + MIR3 SINE MIR 74 182 -26 543 284 175 0 chr5 18362058 18362269 -181267881 + MIR SINE MIR 5 252 -10 420 160 13 0 chr5 18363842 18363917 -181266233 - MER116 DNA Mariner -4 76 1 2093 127 0 0 chr5 18364316 18364608 -181265542 - AluSx SINE Alu -20 292 1 346 287 115 32 chr5 18365356 18365513 -181264637 - MIR SINE MIR -33 229 60 209 220 242 22 chr5 18365613 18365704 -181264446 + MIR SINE MIR 21 131 -131 2305 92 0 3 chr5 18365843 18366137 -181264013 + AluSc SINE Alu 4 296 -13 2509 68 0 0 chr5 18366406 18366702 -181263448 - AluY SINE Alu -15 296 1 247 378 140 7 chr5 18367248 18367555 -181262595 - L2 LINE L2 -375 2939 2592 2184 148 135 5 chr5 18368243 18368622 -181261528 - MSTA LTR MaLR 0 428 1 2424 83 0 3 chr5 18369163 18369465 -181260685 + AluSq SINE Alu 1 301 -12 393 295 0 0 chr5 18370151 18370256 -181259894 + MIR SINE MIR 73 177 -85 391 337 105 30 chr5 18370267 18370599 -181259551 - L2 LINE L2 -29 3284 2928 357 330 86 31 chr5 18370632 18370923 -181259227 - L2 LINE L2 -481 2833 2527 36 40 0 0 chr5 18372743 18372793 -181257357 + AT_rich Low_complexity Low_complexity 1 50 0 1066 126 82 6 chr5 18372898 18373081 -181257069 + THE1C LTR MaLR 179 375 0 8393 141 113 8 chr5 18373081 18374512 -181255638 + THE1C-int LTR MaLR 1 1580 0 2204 144 65 8 chr5 18374512 18374867 -181255283 + THE1C LTR MaLR 1 375 0 2032 146 0 3 chr5 18375589 18375883 -181254267 + AluSx SINE Alu 1 293 -19 1723 200 35 9 chr5 18377486 18377826 -181252324 - MLT1A2 LTR MaLR -20 354 6 556 246 74 29 chr5 18377830 18378005 -181252145 + MLT1G LTR MaLR 108 290 -300 387 0 0 0 chr5 18380223 18380266 -181249884 + (CA)n Simple_repeat Simple_repeat 2 44 0 287 320 109 39 chr5 18380898 18381026 -181249124 - L2 LINE L2 -33 3239 3103 2373 102 0 3 chr5 18381477 18381791 -181248359 + AluSp SINE Alu 1 313 0 1010 151 19 73 chr5 18382704 18382909 -181247241 - MER20 DNA MER1_type -25 194 1 207 0 0 0 chr5 18385450 18385473 -181244677 + (T)n Simple_repeat Simple_repeat 1 23 0 238 321 63 31 chr5 18385596 18385755 -181244395 - MIR SINE MIR -70 192 29 250 274 126 91 chr5 18385816 18386046 -181244104 + MER102a DNA MER1_type 88 325 -5 2257 103 7 0 chr5 18386738 18387038 -181243112 - AluSp SINE Alu 0 313 12 19085 27 6 0 chr5 18387348 18390260 -181239890 + L1PA4 LINE L1 3240 6148 -7 331 271 47 9 chr5 18390565 18390672 -181239478 - MIR3 SINE MIR -6 202 92 196 189 170 19 chr5 18391418 18391471 -181238679 + L2 LINE L2 3253 3313 0 1183 256 105 20 chr5 18391916 18392315 -181237835 + MLT2B1 LTR ERVL 1 433 -87 34 42 0 0 chr5 18392371 18392419 -181237731 + AT_rich Low_complexity Low_complexity 1 48 0 294 94 48 0 chr5 18392454 18392510 -181237640 + MLT2C2 LTR ERVL 417 464 0 26 30 0 0 chr5 18392997 18393030 -181237120 + AT_rich Low_complexity Low_complexity 1 33 0 203 321 74 12 chr5 18394210 18394291 -181235859 - L2 LINE L2 -1 3312 3227 428 274 105 13 chr5 18394326 18394479 -181235671 + L1ME3A LINE L1 5621 5787 -383 590 287 29 55 chr5 18394479 18394751 -181235399 + L2 LINE L2 3047 3311 -2 345 257 20 20 chr5 18394751 18394852 -181235298 + GA-rich Low_complexity Low_complexity 1 101 0 328 293 0 10 chr5 18394868 18394967 -181235183 + L1ME3A LINE L1 5808 5905 -265 2389 214 44 40 chr5 18394969 18395712 -181234438 - L1MA9 LINE L1 -743 5403 4658 * 3680 162 46 70 chr5 18395710 18396618 -181233532 + L1MA9 LINE L1 5410 6300 0 186 222 67 22 chr5 18397993 18398038 -181232112 + MIR SINE MIR 94 140 -68 326 303 0 20 chr5 18398470 18398569 -181231581 - MIR SINE MIR -11 251 155 1089 195 63 17 chr5 18399329 18399640 -181230510 - L1MB4 LINE L1 0 6174 5866 23 33 0 0 chr5 18400121 18400151 -181229999 + AT_rich Low_complexity Low_complexity 1 30 0 2236 70 7 7 chr5 18400269 18400554 -181229596 + AluY SINE Alu 2 286 -25 1950 181 123 23 chr5 18400948 18401379 -181228771 + MLT2B1 LTR ERVL 1 474 -46 847 57 51 23 chr5 18401392 18401567 -181228583 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 368 71 18 0 chr5 18401665 18401721 -181228429 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 213 65 0 0 chr5 18402288 18402319 -181227831 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 279 316 173 0 chr5 18402776 18402909 -181227241 - MER5A DNA MER1_type 0 189 34 284 284 45 58 chr5 18402947 18403102 -181227048 + MIR SINE MIR 91 243 -19 236 214 0 0 chr5 18403854 18403896 -181226254 + MIR SINE MIR 106 147 -115 370 354 62 85 chr5 18403898 18404406 -181225744 - L2 LINE L2 0 3272 2792 2369 96 0 0 chr5 18404406 18404707 -181225443 - AluSc SINE Alu -8 301 1 370 354 62 85 chr5 18404707 18404890 -181225260 - L2 LINE L2 -480 2792 2606 230 291 133 86 chr5 18404908 18405337 -181224813 - L2 LINE L2 -939 2375 1927 1517 179 65 17 chr5 18407733 18408085 -181222065 - MER58D DNA MER1_type -11 375 7 226 255 0 0 chr5 18408236 18408287 -181221863 - MIR SINE MIR -3 259 209 1410 148 63 77 chr5 18408332 18408683 -181221467 + MER4A LTR ERV1 1 346 -318 594 92 242 25 chr5 18408778 18408898 -181221252 + MER4C LTR ERV1 300 445 -20 435 258 13 5 chr5 18408928 18409069 -181221081 - MIR SINE MIR -62 146 33 470 252 34 20 chr5 18409122 18409269 -181220881 + MARNA DNA Mariner 12 160 -426 2416 205 42 7 chr5 18409630 18410083 -181220067 + MER70A LTR ERVL 4 472 0 261 309 31 80 chr5 18410422 18410584 -181219566 + L2 LINE L2 2231 2384 -930 1103 194 63 63 chr5 18410688 18410759 -181219391 - MER33 DNA MER1_type -2266 319 249 2124 131 0 16 chr5 18410759 18410927 -181219223 - AluSx SINE Alu -11 301 139 2294 98 0 0 chr5 18410927 18411224 -181218926 - AluSx SINE Alu -15 297 1 2124 131 0 16 chr5 18411224 18411361 -181218789 - AluSx SINE Alu -173 139 1 1103 194 63 63 chr5 18411361 18411608 -181218542 - MER33 DNA MER1_type -2335 250 1 240 155 138 0 chr5 18412041 18412099 -181218051 + L2 LINE L2 3188 3253 -60 231 278 0 0 chr5 18412222 18412276 -181217874 + L2 LINE L2 3215 3268 -4 1870 121 0 4 chr5 18413210 18413482 -181216668 - MER66B LTR ERV1 0 486 216 479 222 0 26 chr5 18413484 18413601 -181216549 - MER66B LTR ERV1 -372 114 1 2327 153 31 0 chr5 18414042 18414395 -181215755 + THE1B LTR MaLR 1 364 0 519 231 75 81 chr5 18415433 18415664 -181214486 + L1MC4a LINE L1 5822 6052 -1756 2284 116 0 0 chr5 18415664 18415965 -181214185 + AluSx SINE Alu 1 301 -11 519 231 75 81 chr5 18415965 18416028 -181214122 + L1MC4a LINE L1 6052 6114 -1694 229 65 0 0 chr5 18416030 18416076 -181214074 - LTR66 LTR ERVL -171 439 394 233 232 0 37 chr5 18416078 18416160 -181213990 - L1MC4 LINE L1 -1347 6695 6617 * 259 160 187 0 chr5 18416088 18416163 -181213987 + L1MC4 LINE L1 6617 6705 -1337 428 296 8 0 chr5 18416293 18416418 -181213732 + L1MC4 LINE L1 7793 7918 -124 186 133 0 0 chr5 18416432 18416462 -181213688 + (CA)n Simple_repeat Simple_repeat 1 30 0 1693 202 8 60 chr5 18416551 18416932 -181213218 + MLT1A1 LTR MaLR 5 365 0 5889 135 26 14 chr5 18420200 18420300 -181209850 + L1MC1 LINE L1 5351 5448 -885 1888 143 77 44 chr5 18420300 18420663 -181209487 - THE1C LTR MaLR 0 375 1 10368 120 26 42 chr5 18420664 18422268 -181207882 - MSTA-int LTR MaLR -1 1579 3 1923 143 172 21 chr5 18422270 18422642 -181207508 - MSTA LTR MaLR 0 428 1 5889 135 26 14 chr5 18422642 18423506 -181206644 + L1MC1 LINE L1 5448 6331 -2 545 285 98 32 chr5 18424320 18424636 -181205514 + L2 LINE L2 2174 2510 -804 347 323 36 12 chr5 18425410 18425577 -181204573 - MIR SINE MIR -10 252 82 279 122 0 0 chr5 18426291 18426340 -181203810 + (CTATA)n Simple_repeat Simple_repeat 4 52 0 1727 211 62 57 chr5 18426537 18426974 -181203176 + MER77 LTR ERV1 167 605 0 306 250 0 13 chr5 18427170 18427246 -181202904 + L3 LINE CR1 1096 1170 -407 271 258 61 74 chr5 18427281 18427444 -181202706 - MLT1J LTR MaLR -49 462 302 2426 57 0 10 chr5 18427823 18428123 -181202027 + AluY SINE Alu 1 297 -14 3449 139 43 0 chr5 18428146 18428699 -181201451 + L1MA8 LINE L1 5708 6284 -7 23 0 0 0 chr5 18428702 18428725 -181201425 + AT_rich Low_complexity Low_complexity 1 23 0 2195 148 33 33 chr5 18428761 18429125 -181201025 + THE1B LTR MaLR 1 364 0 279 284 45 23 chr5 18429675 18429763 -181200387 + L3 LINE CR1 1481 1570 -7 373 288 34 0 chr5 18429820 18429938 -181200212 + L1ME4a LINE L1 5973 6094 -27 209 196 0 39 chr5 18431835 18431886 -181198264 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 220 289 53 13 chr5 18431974 18432050 -181198100 + MIR SINE MIR 63 141 -67 641 266 48 19 chr5 18432280 18432487 -181197663 - MIR SINE MIR 0 262 50 392 292 112 29 chr5 18433571 18433899 -181196251 + MLT1J LTR MaLR 9 328 -122 2436 74 0 3 chr5 18433937 18434234 -181195916 - AluY SINE Alu -15 296 1 630 211 105 37 chr5 18434371 18434561 -181195589 + MER3 DNA MER1_type 1 203 -6 237 164 91 0 chr5 18436156 18436211 -181193939 + HsTC2 DNA Tc2 1233 1292 -606 809 252 57 9 chr5 18436254 18436484 -181193666 - MIR SINE MIR -21 241 1 4427 78 7 4 chr5 18437145 18437697 -181192453 + MER41A LTR ERV1 1 554 0 180 97 0 0 chr5 18438034 18438065 -181192085 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2157 103 3 0 chr5 18438159 18438449 -181191701 - AluSx SINE Alu -21 291 1 274 310 78 47 chr5 18438510 18438639 -181191511 + L2 LINE L2 3126 3258 -14 238 227 18 100 chr5 18438842 18438952 -181191198 + L2 LINE L2 2430 2530 -784 1900 128 83 0 chr5 18439244 18439532 -181190618 + AluSx SINE Alu 1 312 0 1932 59 0 0 chr5 18440259 18440496 -181189654 + AluY SINE Alu 75 311 0 2433 104 28 43 chr5 18440523 18440952 -181189198 - THE1C LTR MaLR 0 375 1 181 387 44 29 chr5 18441157 18441361 -181188789 - L2 LINE L2 -213 3059 2853 377 382 7 13 chr5 18442113 18442265 -181187885 + MIR3 SINE MIR 10 160 -48 881 256 100 14 chr5 18442422 18442765 -181187385 - LTR16A LTR ERVL 0 457 60 218 250 243 40 chr5 18442899 18443047 -181187103 + MIR SINE MIR 25 202 -6 21 0 0 0 chr5 18443609 18443630 -181186520 + AT_rich Low_complexity Low_complexity 1 21 0 266 235 39 29 chr5 18445733 18445857 -181184293 + MIR SINE MIR 96 216 -46 419 256 103 54 chr5 18446492 18446734 -181183416 + MIR SINE MIR 9 262 0 200 263 0 40 chr5 18446914 18446990 -181183160 + CT-rich Low_complexity Low_complexity 2 74 0 584 266 168 12 chr5 18448905 18449149 -181181001 - L3 LINE CR1 -40 1537 1256 1851 158 6 29 chr5 18449175 18449462 -181180688 + MER47A DNA MER2_type 27 306 -2017 2086 116 3 0 chr5 18449462 18449746 -181180404 - AluSq SINE Alu -24 289 5 1851 158 6 29 chr5 18449746 18449806 -181180344 + MER47A DNA MER2_type 306 366 0 1679 203 14 28 chr5 18450634 18450994 -181179156 + MLT1A1 LTR MaLR 11 365 0 3369 195 82 1 chr5 18451007 18451678 -181178472 + MER44D DNA MER2_type 1 597 -8 307 294 24 141 chr5 18451739 18452116 -181178034 + L2 LINE L2 2981 3313 0 694 288 18 9 chr5 18452119 18452345 -181177805 + MIR SINE MIR 29 256 -6 305 224 0 0 chr5 18453440 18453498 -181176652 - MER5A DNA MER1_type -118 71 14 2769 118 30 23 chr5 18453758 18454055 -181176095 - MER57B LTR ERV1 0 434 131 2100 120 0 0 chr5 18454055 18454373 -181175777 - AluSx SINE Alu 0 318 1 2769 118 30 23 chr5 18454373 18454505 -181175645 - MER57B LTR ERV1 -303 131 1 288 77 0 0 chr5 18455618 18455657 -181174493 + (CA)n Simple_repeat Simple_repeat 2 40 0 358 282 90 115 chr5 18456788 18457430 -181172720 + L1M2 LINE L1 530 1155 -5694 182 175 0 35 chr5 18458233 18458290 -181171860 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2391 116 79 20 chr5 18458820 18459224 -181170926 - MSTC LTR MaLR 0 428 1 213 255 61 133 chr5 18459399 18459497 -181170653 - MIR3 SINE MIR -51 157 67 352 293 47 0 chr5 18460034 18460140 -181170010 + L2 LINE L2 3162 3272 0 3029 202 116 33 chr5 18460461 18461366 -181168784 + L1MDa LINE L1 617 1596 -4944 1414 141 101 4 chr5 18461366 18461642 -181168508 + L1MD1 LINE L1 5930 6232 -10 356 299 77 1 chr5 18462965 18463107 -181167043 - MIR SINE MIR -49 213 63 310 160 28 57 chr5 18463432 18463538 -181166612 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 2448 125 77 10 chr5 18464056 18464457 -181165693 - MSTA LTR MaLR 0 428 1 384 283 37 64 chr5 18464462 18464649 -181165501 - MLT1J2 LTR MaLR -4 446 265 407 230 20 0 chr5 18464706 18464806 -181165344 - MLT1J LTR MaLR -325 186 85 871 320 46 38 chr5 18464918 18465312 -181164838 - L2 LINE L2 -37 3276 2880 1276 321 158 45 chr5 18465755 18466163 -181163987 - L2 LINE L2 -426 2888 2527 1477 173 70 11 chr5 18466163 18466447 -181163703 + AluJo SINE Alu 7 307 -5 1276 321 158 45 chr5 18466447 18467345 -181162805 - L2 LINE L2 -787 2527 1435 364 329 71 52 chr5 18467903 18468009 -181162141 + LTR16A LTR ERVL 130 233 -217 884 257 23 0 chr5 18468009 18468223 -181161927 - MER20 DNA MER1_type 0 219 1 364 329 71 52 chr5 18468223 18468326 -181161824 + LTR16A LTR ERVL 233 343 -107 460 300 94 23 chr5 18468392 18468699 -181161451 + HERV16 LTR ERVL 13 341 -4655 461 349 37 0 chr5 18468783 18469001 -181161149 + LTR16A LTR ERVL 172 397 -53 382 328 102 4 chr5 18469058 18469293 -181160857 + L2 LINE L2 1705 1962 -1352 1313 256 152 72 chr5 18469323 18469533 -181160617 + L2 LINE L2 639 831 -2483 2493 158 9 21 chr5 18469533 18469964 -181160186 + MSTC LTR MaLR 3 428 0 1313 256 152 72 chr5 18469964 18470677 -181159473 + L2 LINE L2 831 1635 -1679 976 291 77 31 chr5 18470718 18471134 -181159016 + LTR16C LTR ERVL 57 491 0 2238 298 65 48 chr5 18471200 18471674 -181158476 + L2 LINE L2 1765 2230 -1084 1062 119 24 0 chr5 18471674 18471842 -181158308 - L1MA3 LINE L1 0 6305 6134 2238 298 65 48 chr5 18471842 18472381 -181157769 + L2 LINE L2 2230 2795 -519 1841 177 0 13 chr5 18473031 18473341 -181156809 + AluJb SINE Alu 1 306 -6 2163 188 65 62 chr5 18474214 18474842 -181155308 + LTR8A LTR ERV1 45 674 -53 299 291 43 10 chr5 18477280 18477399 -181152751 - MIR3 SINE MIR -6 202 78 2289 113 0 0 chr5 18477427 18477728 -181152422 + AluSx SINE Alu 1 301 -11 2098 133 48 25 chr5 18478436 18478790 -181151360 - THE1B LTR MaLR 0 364 3 3231 111 62 0 chr5 18478792 18479289 -181150861 - THE1B-int LTR MaLR 0 1580 1053 246 62 0 0 chr5 18479287 18479319 -181150831 - THE1B-int LTR MaLR -1548 32 1 * 2306 112 48 31 chr5 18479319 18479677 -181150473 - THE1B LTR MaLR 0 364 1 850 51 8 17 chr5 18480791 18480908 -181149242 - L1PA8 LINE L1 0 6172 6057 180 0 0 0 chr5 18480908 18480928 -181149222 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1695 101 0 0 chr5 18480982 18481219 -181148931 - L1PA8 LINE L1 -11 6161 5925 2166 130 0 0 chr5 18483917 18484225 -181145925 - AluSx SINE Alu -2 310 3 192 300 56 56 chr5 18484397 18484487 -181145663 - L3b LINE CR1 -94 1489 1400 2208 124 0 0 chr5 18484822 18485121 -181145029 - AluSx SINE Alu -13 299 1 189 253 147 27 chr5 18485415 18485490 -181144660 - MIR SINE MIR -69 139 56 1926 144 27 3 chr5 18486267 18486559 -181143591 - AluSx SINE Alu -12 300 2 2479 68 10 0 chr5 18486642 18486949 -181143201 + AluY SINE Alu 1 310 -1 3846 146 140 7 chr5 18487228 18487956 -181142194 + LTR1B LTR ERV1 2 826 0 209 301 55 0 chr5 18488016 18488089 -181142061 + MIR SINE MIR 71 147 -115 643 272 72 38 chr5 18488475 18488710 -181141440 - MIR SINE MIR -16 246 4 2154 176 5 17 chr5 18489999 18490356 -181139794 - L1PB4 LINE L1 -7 6149 5796 225 0 0 0 chr5 18490356 18490381 -181139769 + (TG)n Simple_repeat Simple_repeat 2 26 0 2154 176 5 17 chr5 18490381 18490433 -181139717 - L1PB4 LINE L1 -360 5796 5745 3148 191 13 7 chr5 18490434 18491146 -181139004 + L1 LINE L1 4328 5043 -1103 633 199 0 0 chr5 18491224 18491355 -181138795 + (CA)n Simple_repeat Simple_repeat 2 132 0 2335 185 41 11 chr5 18491356 18491815 -181138335 - MLT2B2 LTR ERVL -40 475 3 729 134 17 0 chr5 18492284 18492403 -181137747 + MLT1E LTR MaLR 40 160 -433 2415 226 68 15 chr5 18492544 18493059 -181137091 + L1M4 LINE L1 4682 5243 -903 1784 172 33 7 chr5 18493059 18493361 -181136789 + AluJo SINE Alu 1 310 -2 2415 226 68 15 chr5 18493361 18493523 -181136627 + L1M4 LINE L1 5243 5395 -751 10688 204 38 10 chr5 18493532 18498858 -181131292 + L1M3f LINE L1 4 5525 -803 2016 172 36 33 chr5 18498858 18499408 -181130742 - MLT2A2 LTR ERVL 0 554 1 657 123 0 0 chr5 18499408 18499514 -181130636 + L1PA16 LINE L1 5339 5444 -856 * 10347 162 20 7 chr5 18499509 18500321 -181129829 + L1MA1 LINE L1 3122 3922 -2380 2833 92 0 12 chr5 18500321 18500724 -181129426 + L1PA10 LINE L1 5771 6168 0 10347 162 20 7 chr5 18500724 18502968 -181127182 + L1MA1 LINE L1 3922 6220 -82 2657 151 22 0 chr5 18502968 18503423 -181126727 + L1PA16 LINE L1 5685 6157 -9 26 64 0 0 chr5 18503423 18503470 -181126680 + AT_rich Low_complexity Low_complexity 1 47 0 2102 134 0 6 chr5 18503907 18504221 -181125929 - AluSx SINE Alu 0 312 1 513 286 26 16 chr5 18504657 18504846 -181125304 + LTR16C LTR ERVL 301 491 0 1539 192 36 9 chr5 18507354 18507687 -181122463 - L1PA16 LINE L1 -22 6144 5803 495 355 52 16 chr5 18507916 18508282 -181121868 - LTR16C LTR ERVL 0 491 113 271 109 0 78 chr5 18508750 18508814 -181121336 - Alu SINE Alu -1 301 243 393 268 32 24 chr5 18510255 18510378 -181119772 - MIR3 SINE MIR -18 190 67 2001 214 36 42 chr5 18511969 18512333 -181117817 - MLT1D LTR MaLR -13 492 130 1813 146 93 74 chr5 18512333 18512402 -181117748 - MSTB LTR MaLR 0 426 360 2048 145 0 0 chr5 18512402 18512698 -181117452 - AluSq SINE Alu -17 296 1 1813 146 93 74 chr5 18512698 18513046 -181117104 - MSTB LTR MaLR -66 360 1 2001 214 36 42 chr5 18513046 18513176 -181116974 - MLT1D LTR MaLR -375 130 1 1478 254 60 44 chr5 18513264 18513623 -181116527 - MER74B LTR ERVL -58 564 193 2307 95 0 0 chr5 18513623 18513918 -181116232 - AluSc SINE Alu -14 295 1 1478 254 60 44 chr5 18513918 18514057 -181116093 - MER74B LTR ERVL -429 193 58 192 40 0 0 chr5 18515076 18515101 -181115049 + (CA)n Simple_repeat Simple_repeat 2 26 0 1715 154 49 10 chr5 18515464 18515770 -181114380 + MER46B DNA MER2_type 44 236 0 45 75 0 0 chr5 18517185 18517279 -181112871 + AT_rich Low_complexity Low_complexity 1 94 0 606 207 49 0 chr5 18517654 18517818 -181112332 - L1M4 LINE L1 -3706 2440 2269 4141 268 75 36 chr5 18517828 18518739 -181111411 - L1ME1 LINE L1 -5 6230 5356 3713 142 18 5 chr5 18518739 18519364 -181110786 - L1PB4 LINE L1 -14 6142 5510 4141 268 75 36 chr5 18519364 18521531 -181108619 - L1ME1 LINE L1 -879 5356 3275 2252 150 11 0 chr5 18521531 18521891 -181108259 - MER47A DNA MER2_type -2 364 1 4141 268 75 36 chr5 18521891 18522948 -181107202 - L1ME1 LINE L1 -2960 3275 2260 2217 100 13 10 chr5 18522948 18523247 -181106903 - AluSc SINE Alu -9 300 1 4141 268 75 36 chr5 18523247 18525063 -181105087 - L1ME1 LINE L1 -3975 2260 82 278 249 27 141 chr5 18525328 18525513 -181104637 + MIR SINE MIR 20 183 -79 32 0 0 0 chr5 18525637 18525669 -181104481 + AT_rich Low_complexity Low_complexity 1 32 0 35 24 0 0 chr5 18525698 18525740 -181104410 + AT_rich Low_complexity Low_complexity 1 42 0 3780 242 88 18 chr5 18526312 18527589 -181102561 + L1MD1 LINE L1 19 1502 -5038 1683 194 66 17 chr5 18527589 18527953 -181102197 + MLT2D LTR ERVL 1 480 -40 1750 164 31 65 chr5 18527955 18528063 -181102087 + L1MD1 LINE L1 1528 1638 -4902 997 69 0 0 chr5 18528063 18528194 -181101956 + L1PB1 LINE L1 6020 6150 -1 1750 164 31 65 chr5 18528194 18528531 -181101619 + L1MD1 LINE L1 1638 1958 -4582 * 3495 218 57 32 chr5 18528530 18530328 -181099822 + L1MD1 LINE L1 4654 6539 -97 1310 259 19 11 chr5 18530328 18530699 -181099451 + MLT1A2 LTR MaLR 1 374 0 3495 218 57 32 chr5 18530699 18530797 -181099353 + L1MD1 LINE L1 6539 6633 -3 417 39 0 0 chr5 18531347 18531398 -181098752 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 339 328 90 25 chr5 18532308 18532509 -181097641 - MIR SINE MIR -29 233 20 252 313 10 21 chr5 18532839 18532957 -181097193 + MIR SINE MIR 35 127 -81 396 264 124 35 chr5 18532965 18533223 -181096927 - MLT1J LTR MaLR 0 511 231 1595 152 114 20 chr5 18533398 18533740 -181096410 - THE1C LTR MaLR 0 375 2 288 303 53 53 chr5 18534714 18534866 -181095284 - MIR SINE MIR -32 230 79 21 0 0 0 chr5 18534896 18534917 -181095233 + AT_rich Low_complexity Low_complexity 1 21 0 365 149 149 37 chr5 18535756 18535863 -181094287 + L1MB7 LINE L1 6047 6165 -19 219 320 165 0 chr5 18536640 18536743 -181093407 + L2 LINE L2 3150 3269 -3 316 321 142 5 chr5 18536765 18536977 -181093173 + L2 LINE L2 3002 3242 -71 1726 96 122 11 chr5 18537961 18538231 -181091919 + AluSg1 SINE Alu 1 300 -9 1163 119 0 0 chr5 18538231 18538419 -181091731 + AluSg/x SINE Alu 134 321 0 356 390 52 0 chr5 18539094 18539439 -181090711 + ERVL LTR ERVL 1656 2064 -3700 25 0 0 0 chr5 18540298 18540323 -181089827 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 18541985 18542016 -181088134 + AT_rich Low_complexity Low_complexity 1 31 0 2227 147 0 16 chr5 18542022 18542396 -181087754 - L1PB1 LINE L1 -8 6143 5776 305 192 0 60 chr5 18542439 18542606 -181087544 + (TA)n Simple_repeat Simple_repeat 1 157 0 343 209 22 52 chr5 18542628 18542762 -181087388 + (TATATG)n Simple_repeat Simple_repeat 4 133 0 7694 177 8 7 chr5 18542779 18544855 -181085295 - L1PB1 LINE L1 -371 5780 3706 1684 228 5 16 chr5 18545114 18545492 -181084658 + MLT1A2 LTR MaLR 1 374 0 794 255 205 11 chr5 18545496 18545886 -181084264 + MLT1C LTR MaLR 1 466 -1 184 280 20 20 chr5 18546133 18546183 -181083967 + L2 LINE L2 3223 3272 0 244 255 0 0 chr5 18546377 18546424 -181083726 + polypurine Low_complexity Low_complexity 4 50 0 630 60 0 0 chr5 18546628 18546711 -181083439 + (TCCCC)n Simple_repeat Simple_repeat 2 84 0 2017 140 3 0 chr5 18546711 18547004 -181083146 - AluSg SINE Alu -14 296 3 184 70 47 47 chr5 18547241 18547284 -181082866 + T-rich Low_complexity Low_complexity 2 44 0 717 185 143 37 chr5 18547314 18547503 -181082647 + MER3 DNA MER1_type 1 209 0 820 215 33 56 chr5 18547682 18547896 -181082254 + MER58A DNA MER1_type 1 209 -15 2134 105 22 29 chr5 18548289 18548604 -181081546 - AluSq SINE Alu 0 313 1 319 273 107 8 chr5 18549111 18549232 -181080918 + MLT1H1 LTR MaLR 422 554 -1 2321 99 0 3 chr5 18549493 18549797 -181080353 + AluSx SINE Alu 1 303 -9 3027 127 82 24 chr5 18549876 18550374 -181079776 + MER1A DNA MER1_type 1 527 0 353 361 5 25 chr5 18550439 18550641 -181079509 - L2 LINE L2 -3 3310 3113 282 341 157 18 chr5 18550660 18550877 -181079273 - L2 LINE L2 -885 2429 2183 972 239 131 33 chr5 18551177 18551283 -181078867 + L1M4 LINE L1 2728 2822 -3324 2261 111 0 9 chr5 18551283 18551598 -181078552 + AluSq SINE Alu 1 312 -1 972 239 131 33 chr5 18551598 18552180 -181077970 + L1M4 LINE L1 2822 3488 -2658 1179 133 5 0 chr5 18552200 18552396 -181077754 - L1MA2 LINE L1 0 6304 6108 778 69 0 0 chr5 18552453 18552554 -181077596 - L1P1 LINE L1 -414 5741 5641 * 3766 58 12 10 chr5 18552474 18552971 -181077179 + L1PA2 LINE L1 5657 6154 -1 1521 281 164 23 chr5 18552970 18554130 -181076020 + L1M4 LINE L1 3528 4850 -1296 * 679 200 0 13 chr5 18554225 18554380 -181075770 + L1MB8 LINE L1 6025 6177 -1 1359 273 99 13 chr5 18554395 18554861 -181075289 + L1MEc LINE L1 233 738 -5658 2946 207 39 12 chr5 18554881 18555629 -181074521 - L1M4 LINE L1 -981 5165 4398 26018 31 0 0 chr5 18555631 18559552 -181070598 - L1PA3 LINE L1 -3 6152 2233 12688 55 2 5 chr5 18559552 18561501 -181068649 - L1PA3 LINE L1 -4191 1955 9 906 195 0 0 chr5 18561510 18561710 -181068440 - L1M4 LINE L1 -1717 4429 4230 * 987 236 71 3 chr5 18561702 18561998 -181068152 + L1M4 LINE L1 5088 5403 -743 939 18 9 0 chr5 18662432 18662541 -180967609 + L1HS LINE L1 6044 6153 -2 23 54 0 0 chr5 18662541 18662578 -180967572 + AT_rich Low_complexity Low_complexity 1 37 0 43885 29 21 2 chr5 18663260 18669297 -180960853 + L1HS LINE L1 2 6155 0 22 0 0 0 chr5 18669355 18669377 -180960773 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 18671070 18671094 -180959056 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 18672032 18672053 -180958097 + (TTTAA)n Simple_repeat Simple_repeat 5 25 0 732 104 0 9 chr5 18672058 18672164 -180957986 - L1MA5A LINE L1 -5 6292 6188 2145 177 11 16 chr5 18674312 18674679 -180955471 + MLT1A1 LTR MaLR 1 365 0 2367 69 3 3 chr5 18676445 18676734 -180953416 + AluSp SINE Alu 1 289 -24 207 261 36 9 chr5 18676734 18676845 -180953305 + (TA)n Simple_repeat Simple_repeat 1 114 0 318 305 23 38 chr5 18678364 18678495 -180951655 + L2 LINE L2 3185 3313 0 1889 157 4 0 chr5 18678679 18678960 -180951190 - AluSx SINE Alu -30 282 1 1886 108 0 4 chr5 18679533 18679783 -180950367 + AluSx SINE Alu 48 296 -16 2492 58 3 10 chr5 18679869 18680178 -180949972 + AluY SINE Alu 1 307 -4 317 276 79 8 chr5 18680493 18680620 -180949530 - L1ME4a LINE L1 -11 6110 5975 467 121 0 0 chr5 18680629 18680695 -180949455 + MADE1 DNA Mariner 15 80 0 203 0 0 36 chr5 18681515 18681543 -180948607 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1677 111 103 0 chr5 18681545 18681806 -180948344 - AluSp SINE Alu -25 288 1 425 250 72 72 chr5 18682569 18682676 -180947474 + MIR SINE MIR 9 118 -144 2542 50 3 0 chr5 18682676 18682976 -180947174 - AluY SINE Alu -10 301 1 425 250 72 72 chr5 18682976 18683048 -180947102 + MIR SINE MIR 117 188 -74 228 213 0 0 chr5 18683145 18683192 -180946958 + L2 LINE L2 3265 3311 -2 513 292 167 33 chr5 18683264 18683654 -180946496 + L2 LINE L2 2547 2998 -315 1057 230 164 39 chr5 18683693 18684101 -180946049 + LTR33 LTR ERVL 58 516 -5 736 249 106 26 chr5 18684102 18684375 -180945775 + L2 LINE L2 3019 3313 0 2116 144 0 45 chr5 18685063 18685271 -180944879 - MER1B DNA MER1_type -2373 337 150 2156 92 44 0 chr5 18685271 18685566 -180944584 + AluSp SINE Alu 1 308 -5 2116 144 0 45 chr5 18685566 18685710 -180944440 - MER1B DNA MER1_type -2560 150 1 712 238 23 23 chr5 18686072 18686244 -180943906 - MER5B DNA MER1_type -6 172 1 2120 106 0 4 chr5 18687295 18687615 -180942535 + AluSx SINE Alu 13 331 0 263 188 16 31 chr5 18689518 18689582 -180940568 - MER4-int LTR ERV1 -5433 1165 1103 1648 160 16 39 chr5 18689791 18690097 -180940053 + AluJb SINE Alu 1 299 -13 1498 289 66 38 chr5 18690291 18690868 -180939282 + MLT1E LTR MaLR 1 593 0 1007 232 79 92 chr5 18691196 18691328 -180938822 + MLT1B LTR MaLR 1 133 -257 1820 79 0 0 chr5 18691328 18691555 -180938595 + AluY SINE Alu 83 309 -2 1007 232 79 92 chr5 18691555 18691801 -180938349 + MLT1B LTR MaLR 133 374 -16 3034 129 9 5 chr5 18693572 18693998 -180936152 + MSTA LTR MaLR 1 428 0 4676 82 28 3 chr5 18694144 18694763 -180935387 + L1PB1 LINE L1 5515 6148 -3 24 0 0 0 chr5 18694767 18694791 -180935359 + AT_rich Low_complexity Low_complexity 1 24 0 322 240 44 115 chr5 18694816 18694999 -180935151 + MIR SINE MIR 90 259 -3 240 0 49 24 chr5 18695072 18695113 -180935037 + (TA)n Simple_repeat Simple_repeat 1 42 0 631 194 304 28 chr5 18695121 18695374 -180934776 - MER5C DNA MER1_type -1 323 1 327 254 55 65 chr5 18695705 18695906 -180934244 + LTR67 LTR ERVL 359 557 0 344 246 71 48 chr5 18696765 18696891 -180933259 - MER5B DNA MER1_type -49 129 1 180 333 0 0 chr5 18698711 18698762 -180931388 + MIR SINE MIR 66 116 -92 29958 114 18 20 chr5 18699400 18705157 -180924993 - L1PA7 LINE L1 0 6469 691 1764 187 0 0 chr5 18705741 18706025 -180924125 - AluJb SINE Alu -28 284 1 258 229 47 153 chr5 18706183 18706353 -180923797 - L2 LINE L2 -48 3265 3114 720 230 42 21 chr5 18706509 18706700 -180923450 + MLT1E LTR MaLR 1 195 -398 622 217 7 35 chr5 18706806 18706949 -180923201 + MLT1B LTR MaLR 423 561 -6 448 239 20 70 chr5 18706966 18707167 -180922983 - L2 LINE L2 -172 3141 2951 205 266 138 27 chr5 18707202 18707390 -180922760 - MIR SINE MIR -30 232 24 1975 251 65 45 chr5 18707403 18707728 -180922422 - MLT1E2 LTR MaLR -4 622 278 2433 86 0 0 chr5 18707728 18708029 -180922121 - AluSc SINE Alu -8 301 1 1975 251 65 45 chr5 18708029 18708301 -180921849 - MLT1E2 LTR MaLR -348 278 13 232 355 79 7 chr5 18708468 18708620 -180921530 - L2 LINE L2 -218 3054 2892 2931 88 5 8 chr5 18708939 18709316 -180920834 + L1PA8A LINE L1 5753 6128 -3 233 346 0 12 chr5 18710125 18710206 -180919944 + GA-rich Low_complexity Low_complexity 6 85 0 422 333 22 30 chr5 18710778 18711009 -180919141 + MLT1K LTR MaLR 350 578 -10 387 191 63 35 chr5 18711381 18711500 -180918650 - MSTB1 LTR MaLR 0 432 246 465 165 23 11 chr5 18711548 18711653 -180918497 - MSTB1 LTR MaLR 0 432 346 286 27 27 0 chr5 18711717 18711754 -180918396 - MSTB1 LTR MaLR 0 432 395 1591 165 32 51 chr5 18711920 18712273 -180917877 - MSTB1 LTR MaLR -72 324 4 341 320 135 17 chr5 18713239 18713408 -180916742 + MIR SINE MIR 61 253 -9 2356 138 30 25 chr5 18713408 18713770 -180916380 - THE1B LTR MaLR 0 364 1 208 227 0 0 chr5 18713870 18713914 -180916236 + L2 LINE L2 3265 3308 -5 516 345 21 21 chr5 18714866 18715060 -180915090 + MIR3 SINE MIR 6 199 -9 403 305 47 8 chr5 18715886 18716014 -180914136 + MIR SINE MIR 12 144 -118 2337 138 8 3 chr5 18716054 18716416 -180913734 + THE1B LTR MaLR 1 364 0 521 207 43 0 chr5 18716428 18716544 -180913606 - MER20 DNA MER1_type -98 121 1 187 89 89 0 chr5 18717598 18717654 -180912496 + (TA)n Simple_repeat Simple_repeat 1 61 0 857 216 64 23 chr5 18718336 18718554 -180911596 + MIR SINE MIR 3 229 -33 254 258 90 0 chr5 18718637 18718726 -180911424 + MIR3 SINE MIR 84 180 -28 388 311 124 48 chr5 18718765 18719108 -180911042 + L1ME4a LINE L1 5539 5933 -188 198 0 0 0 chr5 18719108 18719130 -180911020 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 388 311 124 48 chr5 18719130 18719285 -180910865 + L1ME4a LINE L1 5933 6075 -46 1259 117 4 60 chr5 18719286 18719535 -180910615 - L1PA13 LINE L1 -1 6162 5928 1949 99 10 17 chr5 18719536 18719838 -180910312 + THE1A LTR MaLR 56 355 0 561 306 52 22 chr5 18719908 18720140 -180910010 + MIR SINE MIR 18 256 -6 660 282 86 21 chr5 18722662 18722896 -180907254 + MIR SINE MIR 2 250 -12 324 0 0 0 chr5 18724000 18724036 -180906114 + (TG)n Simple_repeat Simple_repeat 2 37 0 25 0 0 0 chr5 18724204 18724229 -180905921 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 18725706 18725731 -180904419 + AT_rich Low_complexity Low_complexity 1 25 0 520 275 105 16 chr5 18725792 18725996 -180904154 + MIR SINE MIR 3 219 -43 2257 135 34 8 chr5 18726132 18726487 -180903663 - THE1B LTR MaLR 0 364 1 2226 107 0 3 chr5 18727167 18727466 -180902684 + AluSg SINE Alu 1 298 -12 1887 224 75 47 chr5 18727737 18728331 -180901819 - MLT1E1 LTR MaLR -12 642 28 2773 85 11 11 chr5 18728331 18728706 -180901444 + THE1C LTR MaLR 1 375 0 1887 224 75 47 chr5 18728706 18728735 -180901415 - MLT1E1 LTR MaLR -626 28 1 405 332 129 11 chr5 18728775 18729061 -180901089 - L1MC/D LINE L1 -2457 5585 5266 927 233 12 27 chr5 18729183 18729441 -180900709 + MER93b LTR ERV1 108 361 -12 2487 60 0 3 chr5 18729858 18730158 -180899992 - AluY SINE Alu -12 299 1 245 203 8 55 chr5 18731901 18732029 -180898121 + (TA)n Simple_repeat Simple_repeat 1 122 0 337 298 142 19 chr5 18732385 18732590 -180897560 - L2 LINE L2 -1 3312 3083 1905 152 45 22 chr5 18732919 18733275 -180896875 - THE1B LTR MaLR 0 364 1 6011 121 16 3 chr5 18733275 18734201 -180895949 - THE1B-int LTR MaLR 0 1580 643 408 268 93 103 chr5 18734257 18734980 -180895170 + L1M4 LINE L1 3782 4492 -1654 2257 95 20 0 chr5 18734980 18735274 -180894876 - AluSc SINE Alu -9 300 1 408 268 93 103 chr5 18735274 18735608 -180894542 + L1M4 LINE L1 4492 4828 -1318 206 256 13 0 chr5 18736032 18736110 -180894040 + GA-rich Low_complexity Low_complexity 1 79 0 318 299 57 32 chr5 18736343 18736814 -180893336 + L1M4 LINE L1 4878 5360 -786 1783 166 47 36 chr5 18737313 18737674 -180892476 + MLT1A1 LTR MaLR 1 365 0 1089 298 55 70 chr5 18739139 18739653 -180890497 + L2 LINE L2 2806 3311 -2 246 259 37 49 chr5 18739691 18739772 -180890378 + L2 LINE L2 3192 3271 -42 218 281 151 60 chr5 18740136 18740321 -180889829 + MIR SINE MIR 13 214 -48 256 219 37 24 chr5 18741075 18741157 -180888993 - MIR SINE MIR -128 134 52 695 236 37 11 chr5 18741330 18741727 -180888423 - LTR37B LTR ERV1 0 468 6 1677 159 49 62 chr5 18742355 18742669 -180887481 + MLT1A1 LTR MaLR 1 311 -54 2368 128 28 17 chr5 18742669 18743029 -180887121 - THE1B LTR MaLR 0 364 1 1677 159 49 62 chr5 18743029 18743084 -180887066 + MLT1A1 LTR MaLR 311 365 0 345 196 93 162 chr5 18745250 18745321 -180884829 - MER69 DNA AcHobo -1036 190 116 450 0 0 0 chr5 18745321 18745371 -180884779 + (TG)n Simple_repeat Simple_repeat 2 51 0 2191 107 0 0 chr5 18745372 18745653 -180884497 - AluSx SINE Alu -31 281 1 345 196 93 162 chr5 18745653 18745783 -180884367 - MER69 DNA AcHobo -1109 117 1 180 0 0 0 chr5 18746585 18746605 -180883545 + (CCA)n Simple_repeat Simple_repeat 3 22 0 665 243 22 5 chr5 18747407 18747592 -180882558 - MER53 DNA DNA -1 188 1 341 239 123 71 chr5 18747609 18747764 -180882386 - MIR SINE MIR 0 262 100 1187 236 121 11 chr5 18748074 18748430 -180881720 + MSTD LTR MaLR 2 396 0 181 400 19 0 chr5 18748742 18748847 -180881303 - L2 LINE L2 -221 3051 2945 2068 142 0 0 chr5 18749137 18749440 -180880710 + AluSx SINE Alu 1 303 -9 180 359 127 21 chr5 18749893 18750035 -180880115 + MIR3 SINE MIR 15 171 -37 235 331 129 8 chr5 18750900 18751024 -180879126 + MIR3 SINE MIR 62 200 -8 2441 62 0 56 chr5 18751537 18751861 -180878289 - AluSx SINE Alu -6 306 1 261 326 170 36 chr5 18751931 18752348 -180877802 + L3 LINE CR1 1064 1536 -41 227 343 0 0 chr5 18752797 18752867 -180877283 + MIR SINE MIR 42 111 -151 * 776 208 33 44 chr5 18752863 18753046 -180877104 + MER5A DNA MER1_type 8 188 -1 373 233 167 17 chr5 18753046 18753165 -180876985 + MIR SINE MIR 102 238 -24 2028 126 0 38 chr5 18753470 18753787 -180876363 - AluSc SINE Alu -4 305 1 365 288 23 23 chr5 18754305 18754437 -180875713 - MIR SINE MIR -122 140 9 33 43 0 0 chr5 18754571 18754618 -180875532 + AT_rich Low_complexity Low_complexity 1 47 0 205 299 75 59 chr5 18754727 18754914 -180875236 - L2 LINE L2 -8 3264 3075 194 163 70 23 chr5 18754911 18754954 -180875196 + MER5B DNA MER1_type 102 146 -32 * 585 206 7 35 chr5 18756642 18756783 -180873367 + MER58B DNA MER1_type 204 340 -1 369 0 0 0 chr5 18757113 18757154 -180872996 + (CA)n Simple_repeat Simple_repeat 1 41 0 248 188 16 0 chr5 18757701 18757765 -180872385 + (CA)n Simple_repeat Simple_repeat 2 66 0 2359 138 8 6 chr5 18757991 18758354 -180871796 - THE1B LTR MaLR 0 364 1 266 308 125 10 chr5 18758713 18758817 -180871333 - MIR SINE MIR -63 145 30 2925 123 32 20 chr5 18759204 18759570 -180870580 - L1PB3 LINE L1 0 6154 5779 267 103 0 0 chr5 18759570 18759609 -180870541 + (TA)n Simple_repeat Simple_repeat 2 40 0 2925 123 32 20 chr5 18759609 18759739 -180870411 - L1PB3 LINE L1 -375 5779 5652 255 240 260 0 chr5 18761092 18761188 -180868962 - MER103 DNA DNA -44 122 2 6918 62 3 3 chr5 18761269 18762654 -180867496 - L1PA7 LINE L1 0 6154 4768 4802 75 3 0 chr5 18762654 18763332 -180866818 + L1PA7 LINE L1 4080 4759 -1387 6311 79 5 5 chr5 18763341 18764230 -180865920 - L1PA8 LINE L1 -6 6166 5278 2314 149 21 21 chr5 18764240 18764628 -180865522 + MLT1B LTR MaLR 1 388 -2 258 327 55 35 chr5 18764947 18765146 -180865004 - L2 LINE L2 -2 3311 3109 2219 119 0 0 chr5 18765281 18765575 -180864575 - AluSq SINE Alu -16 297 4 246 277 34 67 chr5 18766296 18766415 -180863735 - MIR SINE MIR 0 262 148 185 265 0 20 chr5 18766472 18766521 -180863629 - MIR SINE MIR -201 61 14 225 290 16 0 chr5 18767065 18767127 -180863023 - L2 LINE L2 -24 3248 3186 2044 128 33 3 chr5 18768615 18768919 -180861231 + AluSq SINE Alu 1 313 0 274 299 55 8 chr5 18769188 18769315 -180860835 - MER94 DNA DNA -1 133 1 243 327 37 9 chr5 18769735 18769842 -180860308 + MIR3 SINE MIR 98 207 -1 2033 164 5 44 chr5 18770590 18770938 -180859212 + MLT1B LTR MaLR 1 334 -56 2290 135 12 24 chr5 18770938 18771279 -180858871 - MER1B DNA MER1_type 0 337 1 2033 164 5 44 chr5 18771279 18771314 -180858836 + MLT1B LTR MaLR 334 369 -21 209 33 33 0 chr5 18771356 18771386 -180858764 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1615 191 0 3 chr5 18771388 18771671 -180858479 - AluJo SINE Alu -30 282 1 269 341 0 11 chr5 18772245 18772336 -180857814 + GA-rich Low_complexity Low_complexity 2 91 0 645 307 115 48 chr5 18772718 18772904 -180857246 - L2 LINE L2 -10 3303 3131 2201 118 3 0 chr5 18772904 18773200 -180856950 + AluSx SINE Alu 1 297 -15 645 307 115 48 chr5 18773200 18773826 -180856324 - L2 LINE L2 -182 3131 2440 420 97 0 0 chr5 18774160 18774222 -180855928 + (CA)n Simple_repeat Simple_repeat 2 63 0 1840 214 36 13 chr5 18774585 18774973 -180855177 + MLT2C1 LTR ERVL 1 397 0 289 307 143 7 chr5 18775205 18775345 -180854805 + MIR SINE MIR 104 262 0 2291 98 3 3 chr5 18776195 18776500 -180853650 + AluSp SINE Alu 1 305 -8 206 303 90 11 chr5 18776703 18776792 -180853358 + L2 LINE L2 3138 3233 -39 247 359 53 23 chr5 18778262 18778393 -180851757 + MER91A DNA MER1_type 26 160 -36 213 280 0 0 chr5 18778399 18778449 -180851701 + MER91A DNA MER1_type 137 186 -10 255 318 23 8 chr5 18778508 18778640 -180851510 - MER94 DNA DNA 0 134 1 1154 214 10 0 chr5 18779373 18779579 -180850571 - MER58A DNA MER1_type -15 209 2 189 0 0 0 chr5 18780891 18780912 -180849238 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 296 283 71 0 chr5 18782036 18782135 -180848015 + L2 LINE L2 3207 3312 -1 1045 233 97 44 chr5 18782266 18782678 -180847472 + MLT1C LTR MaLR 34 467 0 267 247 27 130 chr5 18783295 18783441 -180846709 + Tigger8 DNA MER2_type 527 657 -9 420 271 30 98 chr5 18783910 18784113 -180846037 + LTR33 LTR ERVL 13 201 -320 382 243 179 7 chr5 18784207 18784347 -180845803 + LTR33 LTR ERVL 328 491 -30 230 336 65 43 chr5 18784622 18784854 -180845296 - MIR SINE MIR -5 257 21 490 284 110 5 chr5 18785363 18785581 -180844569 - MIR SINE MIR 0 262 22 297 304 52 52 chr5 18785679 18785873 -180844277 + L3 LINE CR1 771 964 -613 200 270 16 32 chr5 18786441 18786504 -180843646 + L3 LINE CR1 1220 1281 -296 2218 103 10 0 chr5 18786708 18787010 -180843140 + AluY SINE Alu 1 305 -6 998 124 65 0 chr5 18787011 18787164 -180842986 + AluSc SINE Alu 132 294 -15 1783 213 63 16 chr5 18787565 18788006 -180842144 + MLT1C LTR MaLR 6 467 0 224 322 123 20 chr5 18788396 18788542 -180841608 + L2 LINE L2 2944 3104 -209 1073 252 139 23 chr5 18788622 18789055 -180841095 - MLT1D LTR MaLR -2 503 21 28 29 0 0 chr5 18789134 18789169 -180840981 + AT_rich Low_complexity Low_complexity 1 35 0 195 162 0 0 chr5 18789564 18789601 -180840549 + GA-rich Low_complexity Low_complexity 2 38 0 2213 163 78 8 chr5 18790981 18791379 -180838771 - MSTB LTR MaLR 0 426 1 209 290 129 16 chr5 18791550 18791674 -180838476 - MIR3 SINE MIR -3 205 68 1201 303 197 49 chr5 18791883 18793253 -180836897 + L2 LINE L2 87 1707 -1607 6254 66 8 1 chr5 18793253 18794015 -180836135 + L1PA7 LINE L1 5373 6139 -15 1201 303 197 49 chr5 18794015 18794169 -180835981 + L2 LINE L2 1707 1837 -1477 507 254 115 90 chr5 18794224 18794755 -180835395 - HAL1 LINE L1 -100 2407 1864 1839 151 37 14 chr5 18796378 18796728 -180833422 - L1MA4 LINE L1 -7 6293 5936 322 252 103 47 chr5 18797348 18797455 -180832695 + MER5B DNA MER1_type 63 175 -3 183 318 114 0 chr5 18797534 18797622 -180832528 - L2 LINE L2 -1900 1414 1317 252 0 0 0 chr5 18798113 18798141 -180832009 + (T)n Simple_repeat Simple_repeat 1 28 0 395 327 47 0 chr5 18798635 18798785 -180831365 + MIR SINE MIR 50 206 -56 22 56 0 0 chr5 18799759 18799795 -180830355 + AT_rich Low_complexity Low_complexity 1 36 0 885 228 73 23 chr5 18801453 18801876 -180828274 + MLT1D LTR MaLR 22 503 -2 1565 160 49 45 chr5 18802212 18802500 -180827650 - AluJo SINE Alu -23 289 1 21 0 0 0 chr5 18802509 18802530 -180827620 + AT_rich Low_complexity Low_complexity 1 21 0 1467 199 10 23 chr5 18802663 18802964 -180827186 + AluJo SINE Alu 1 297 -15 375 261 164 29 chr5 18803149 18803356 -180826794 - MIR SINE MIR -8 254 20 2143 111 27 10 chr5 18803793 18804090 -180826060 + AluSq SINE Alu 3 304 -9 193 225 25 0 chr5 18804245 18804285 -180825865 - MIR SINE MIR -137 71 31 219 333 0 35 chr5 18804673 18804760 -180825390 + MIR SINE MIR 30 113 -95 371 302 107 18 chr5 18805000 18805197 -180824953 + MIR SINE MIR 3 215 -47 297 341 9 67 chr5 18805350 18805573 -180824577 - MLT1J LTR MaLR -193 318 109 899 285 10 24 chr5 18805907 18806195 -180823955 - L1MC4a LINE L1 0 7808 7525 2300 106 0 0 chr5 18807310 18807612 -180822538 - AluY SINE Alu -9 302 1 1709 142 11 4 chr5 18808601 18808869 -180821281 + L1PA11 LINE L1 5905 6174 0 294 29 0 0 chr5 18809783 18809818 -180820332 + (TAGG)n Simple_repeat Simple_repeat 1 35 0 216 0 0 0 chr5 18809819 18809843 -180820307 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 252 321 28 9 chr5 18810023 18810129 -180820021 - L2 LINE L2 -948 2366 2259 1736 200 26 29 chr5 18810628 18811013 -180819137 + MER58D DNA MER1_type 3 386 0 526 313 32 36 chr5 18811051 18811285 -180818865 - MIR SINE MIR -26 236 6 474 165 35 0 chr5 18811696 18811781 -180818369 + MLT2B3 LTR ERVL 1 88 -466 1191 226 19 70 chr5 18811788 18812102 -180818048 + MLT2B3 LTR ERVL 257 554 0 247 228 94 134 chr5 18812574 18812723 -180817427 - MIR SINE MIR -118 144 2 435 234 6 126 chr5 18813177 18813344 -180816806 - MIR SINE MIR -68 194 48 1611 228 129 9 chr5 18813494 18813920 -180816230 + MLT1E LTR MaLR 111 587 -6 1591 185 27 10 chr5 18814020 18814312 -180815838 + AluJb SINE Alu 1 297 -15 184 245 0 20 chr5 18815812 18815861 -180814289 + MIR3 SINE MIR 157 204 -4 401 210 0 37 chr5 18816038 18816119 -180814031 + L2 LINE L2 3189 3266 -47 180 77 0 0 chr5 18816140 18816166 -180813984 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 22 0 0 0 chr5 18816282 18816304 -180813846 + AT_rich Low_complexity Low_complexity 1 22 0 245 222 0 0 chr5 18817366 18817411 -180812739 - MER20 DNA MER1_type 0 219 175 651 156 78 0 chr5 18817419 18817547 -180812603 + L1PA16 LINE L1 6029 6166 0 207 100 0 0 chr5 18820475 18820505 -180809645 + (CA)n Simple_repeat Simple_repeat 1 30 0 388 354 15 56 chr5 18821678 18821731 -180808419 - MIR3 SINE MIR -4 204 150 512 212 258 7 chr5 18821731 18821882 -180808268 + MER5A DNA MER1_type 1 189 0 388 354 15 56 chr5 18821882 18822026 -180808124 - MIR3 SINE MIR -58 150 15 180 0 0 0 chr5 18823374 18823394 -180806756 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 661 74 279 0 chr5 18823616 18823738 -180806412 - L1PA7 LINE L1 0 6154 5999 283 302 113 9 chr5 18825714 18825820 -180804330 + L2 LINE L2 3196 3312 -1 372 303 59 17 chr5 18825877 18825996 -180804154 + MER91A DNA MER1_type 20 143 -53 2427 61 0 3 chr5 18826256 18826552 -180803598 - AluY SINE Alu -16 295 1 2358 108 0 0 chr5 18826628 18826935 -180803215 - AluSx SINE Alu -5 307 1 1087 204 195 0 chr5 18826969 18827200 -180802950 + AluJo SINE Alu 32 307 -5 2062 122 59 6 chr5 18827208 18827545 -180802605 - THE1B LTR MaLR 0 364 10 1077 204 23 9 chr5 18827615 18827831 -180802319 - MER20 DNA MER1_type 0 219 1 658 289 29 49 chr5 18929036 18929282 -180700868 - MIR SINE MIR -13 249 9 289 342 9 18 chr5 18932611 18932722 -180697428 - L2 LINE L2 -23 3290 3181 329 332 57 16 chr5 18933025 18933218 -180696932 - L2 LINE L2 -490 2824 2624 193 326 20 31 chr5 18933219 18933317 -180696833 + MIR SINE MIR 164 260 -2 271 295 213 21 chr5 18934538 18934955 -180695195 - L2 LINE L2 -23 3290 2743 219 36 0 0 chr5 18936323 18936351 -180693799 + (TG)n Simple_repeat Simple_repeat 2 29 0 218 310 0 0 chr5 18937810 18937897 -180692253 + C-rich Low_complexity Low_complexity 1 87 0 209 277 0 50 chr5 18938000 18938101 -180692049 + C-rich Low_complexity Low_complexity 4 99 0 210 37 0 0 chr5 18938239 18938266 -180691884 + (CCG)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr5 18938271 18938299 -180691851 + GC_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr5 18938526 18938565 -180691585 + GC_rich Low_complexity Low_complexity 1 39 0 229 188 14 29 chr5 18938591 18938660 -180691490 + (CAG)n Simple_repeat Simple_repeat 3 70 0 851 254 37 18 chr5 18942077 18942294 -180687856 - MIR SINE MIR -34 228 8 966 260 146 31 chr5 18942429 18942875 -180687275 - MLT1G1 LTR MaLR -9 586 90 581 331 6 0 chr5 18943784 18943956 -180686194 + MIR SINE MIR 84 256 -6 1141 227 106 11 chr5 18946004 18946286 -180683864 - MER58B DNA MER1_type -1 340 32 1410 13 0 0 chr5 18946465 18946638 -180683512 + L1PA2 LINE L1 5992 6164 0 337 285 66 40 chr5 18949856 18950007 -180680143 - L2 LINE L2 -1 3312 3158 1291 232 37 92 chr5 18950062 18950550 -180679600 + MLT2B1 LTR ERVL 1 461 -59 234 0 0 0 chr5 18950550 18950576 -180679574 + (CA)n Simple_repeat Simple_repeat 2 27 0 539 177 0 0 chr5 18950585 18950664 -180679486 + Tigger5 DNA MER2_type 1 79 -2244 282 116 0 0 chr5 18950799 18950842 -180679308 + (CA)n Simple_repeat Simple_repeat 2 44 0 261 163 0 0 chr5 18950842 18950883 -180679267 + MLT2B1 LTR ERVL 477 520 0 297 294 0 0 chr5 18950886 18950971 -180679179 + L1MC3 LINE L1 6487 6571 -1214 296 297 56 146 chr5 18951970 18952239 -180677911 - L2 LINE L2 -2 3270 3065 2080 116 7 7 chr5 18952239 18952542 -180677608 - AluSc SINE Alu -6 303 1 296 297 56 146 chr5 18952542 18952773 -180677377 - L2 LINE L2 -207 3065 2815 186 280 152 45 chr5 18953327 18953591 -180676559 - L2 LINE L2 -1207 2107 1816 2218 113 0 0 chr5 18953634 18953926 -180676224 + AluSx SINE Alu 1 292 -20 2304 194 24 72 chr5 18954004 18954298 -180675852 - MER21B LTR ERV1 -3 860 553 1730 145 19 0 chr5 18954298 18954560 -180675590 + AluJb SINE Alu 2 268 -44 2304 194 24 72 chr5 18954560 18954575 -180675575 - MER21B LTR ERV1 -310 553 539 255 31 0 0 chr5 18954575 18954607 -180675543 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2304 194 24 72 chr5 18954607 18954849 -180675301 - MER21B LTR ERV1 -324 539 335 6551 93 2 0 chr5 18954849 18955691 -180674459 + THE1B-int LTR MaLR 737 1580 0 2272 141 30 25 chr5 18955691 18956053 -180674097 + THE1B LTR MaLR 1 364 0 261 337 0 12 chr5 18956544 18956630 -180673520 + L2 LINE L2 3186 3270 -2 1573 221 22 14 chr5 18956772 18957130 -180673020 - MLT1H1 LTR MaLR 0 555 195 663 224 6 60 chr5 18957130 18957313 -180672837 + MER20 DNA MER1_type 3 175 -44 277 228 129 30 chr5 18957334 18957435 -180672715 - MLT1H1 LTR MaLR -351 204 95 277 277 128 14 chr5 18957438 18957579 -180672571 - MLT1G1 LTR MaLR -438 157 1 453 276 32 19 chr5 18958211 18958367 -180671783 + Charlie8 DNA MER1_type 62 219 -2198 276 111 0 0 chr5 18958472 18958517 -180671633 + (TAA)n Simple_repeat Simple_repeat 2 46 0 383 297 77 46 chr5 18958758 18958953 -180671197 + MLT1H LTR MaLR 119 319 -230 353 244 8 32 chr5 18959085 18959208 -180670942 - L1MC5 LINE L1 -36 7925 7806 1778 166 7 0 chr5 18959723 18960013 -180670137 - AluSx SINE Alu -20 292 1 1178 239 84 22 chr5 18960085 18960490 -180669660 - L1MC/D LINE L1 -2000 5808 5379 292 175 25 12 chr5 18960490 18960570 -180669580 + (TA)n Simple_repeat Simple_repeat 2 82 0 198 71 0 0 chr5 18960571 18960599 -180669551 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 648 222 86 56 chr5 18960603 18960765 -180669385 - AluJb SINE Alu -23 289 123 1272 285 87 25 chr5 18960869 18961353 -180668797 - MER34 LTR ERV1 0 542 29 600 247 0 20 chr5 18962266 18962412 -180667738 - LTR67 LTR ERVL -5 552 410 1349 260 91 29 chr5 18962704 18963188 -180666962 + MLT1E LTR MaLR 75 588 -5 189 121 0 0 chr5 18963269 18963302 -180666848 + (A)n Simple_repeat Simple_repeat 1 33 0 417 110 55 0 chr5 18963938 18964011 -180666139 - L1M4 LINE L1 -3172 2974 2898 448 276 97 21 chr5 18964244 18964389 -180665761 - MIR SINE MIR -70 192 37 2199 107 48 46 chr5 18965096 18965469 -180664681 - THE1C LTR MaLR -1 374 1 21 82 0 0 chr5 18965561 18965610 -180664540 + AT_rich Low_complexity Low_complexity 1 49 0 34 55 0 0 chr5 18965699 18965754 -180664396 + AT_rich Low_complexity Low_complexity 1 55 0 226 287 9 9 chr5 18966187 18966295 -180663855 + (TA)n Simple_repeat Simple_repeat 1 108 0 2634 175 161 141 chr5 18966410 18966878 -180663272 + L1MC3 LINE L1 6572 7029 -756 302 56 0 0 chr5 18966878 18966914 -180663236 + tRNA-Gly-GGG tRNA tRNA 1 36 -38 2634 175 161 141 chr5 18966914 18966928 -180663222 + L1MC3 LINE L1 7029 7041 -744 291 219 115 62 chr5 18966928 18967024 -180663126 + MLT1F1 LTR MaLR 36 136 -431 2634 175 161 141 chr5 18967024 18967583 -180662567 + L1MC3 LINE L1 7041 7768 -17 503 322 156 8 chr5 18967626 18968102 -180662048 - L2 LINE L2 -248 3065 2508 819 223 53 49 chr5 18968124 18968371 -180661779 + MER46C DNA MER2_type 86 333 -5 946 199 65 79 chr5 18968394 18968686 -180661464 - L1M4 LINE L1 -3480 2666 2379 766 191 41 114 chr5 18968686 18969131 -180661019 - MLT1A1 LTR MaLR 0 365 1 582 220 24 6 chr5 18969131 18969299 -180660851 - L1M4 LINE L1 -3763 2383 2213 268 308 117 25 chr5 18969803 18969923 -180660227 + MIR SINE MIR 2 132 -130 434 284 101 51 chr5 18970077 18970334 -180659816 - L2 LINE L2 0 3313 3044 21 0 0 0 chr5 18970696 18970717 -180659433 + AT_rich Low_complexity Low_complexity 1 21 0 1238 56 0 12 chr5 18971642 18971804 -180658346 + L1PA5 LINE L1 5989 6148 -6 23 33 0 0 chr5 18972388 18972418 -180657732 + AT_rich Low_complexity Low_complexity 1 30 0 361 153 86 0 chr5 18972418 18972581 -180657569 + (TA)n Simple_repeat Simple_repeat 1 177 0 33 43 0 0 chr5 18972581 18972628 -180657522 + AT_rich Low_complexity Low_complexity 1 47 0 21 57 0 0 chr5 18973627 18973662 -180656488 + AT_rich Low_complexity Low_complexity 1 35 0 268 207 0 0 chr5 18973662 18973720 -180656430 + Charlie1 DNA MER1_type 2180 2237 -524 984 164 11 5 chr5 18973735 18973924 -180656226 - L1MA8 LINE L1 -6 6285 6096 1546 72 36 18 chr5 18973924 18974145 -180656005 + L1PA10 LINE L1 5942 6167 -1 4928 177 83 1 chr5 18974147 18975772 -180654378 - L1MA4 LINE L1 -180 6120 4349 1853 158 55 0 chr5 18975865 18976193 -180653957 + MER7A DNA MER2_type 1 344 -2 197 273 55 0 chr5 18977043 18977098 -180653052 - MIR SINE MIR 0 262 205 28 0 0 0 chr5 18977392 18977420 -180652730 + AT_rich Low_complexity Low_complexity 1 28 0 398 277 73 55 chr5 18977902 18978176 -180651974 - L1MC/D LINE L1 -2213 5595 5317 310 280 84 38 chr5 18978359 18978598 -180651552 - L1MC/D LINE L1 -3314 2832 2583 958 242 68 84 chr5 18978673 18979186 -180650964 - MLT1J LTR MaLR -2 509 5 362 335 85 6 chr5 18980645 18980895 -180649255 + L1MC/D LINE L1 3889 4173 -1973 461 92 13 0 chr5 18981152 18981228 -180648922 + (CA)n Simple_repeat Simple_repeat 2 78 0 438 282 26 48 chr5 18981420 18981647 -180648503 + L1MC/D LINE L1 5602 5823 -298 1257 264 49 3 chr5 18982660 18983027 -180647123 - L1ME3 LINE L1 -1 6161 5778 447 290 0 26 chr5 18983149 18983304 -180646846 - MLT1H LTR MaLR -377 172 22 571 241 11 0 chr5 18983321 18983482 -180646668 - L1ME3 LINE L1 -537 5625 5460 232 232 0 0 chr5 18984010 18984066 -180646084 + (TCTCTG)n Simple_repeat Simple_repeat 2 57 0 627 269 55 38 chr5 18985341 18985579 -180644571 + MIR SINE MIR 15 256 -6 189 222 22 0 chr5 18986227 18986272 -180643878 - L3 LINE CR1 -16 1561 1516 747 185 109 112 chr5 18987344 18987657 -180642493 - MLT1A1 LTR MaLR -53 312 1 457 246 8 25 chr5 18987658 18987780 -180642370 - L1MC3 LINE L1 -535 7250 7131 343 312 71 24 chr5 18988651 18988821 -180641329 - MIR SINE MIR 0 262 85 2116 76 0 134 chr5 18989826 18990183 -180639967 + AluSp SINE Alu 1 309 -4 216 0 0 0 chr5 18991083 18991107 -180639043 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 308 242 121 10 chr5 18991513 18991612 -180638538 + L2 LINE L2 3190 3299 -14 220 163 82 0 chr5 18991896 18991945 -180638205 + MIR SINE MIR 209 261 -1 366 288 83 49 chr5 18992127 18992332 -180637818 - L1 LINE L1 -2375 3771 3560 930 276 91 52 chr5 18993316 18993777 -180636373 + L2 LINE L2 2421 2899 -415 2158 107 0 35 chr5 18993869 18994179 -180635971 + AluSq SINE Alu 1 299 -14 218 380 36 36 chr5 18995122 18995259 -180634891 + L2 LINE L2 3136 3272 0 228 290 32 0 chr5 18996369 18996431 -180633719 - L2 LINE L2 -224 3048 2985 1213 171 0 5 chr5 18996495 18996694 -180633456 + AluJb SINE Alu 107 304 -8 297 319 7 44 chr5 18997470 18997605 -180632545 + L2 LINE L2 3183 3312 -1 642 269 66 0 chr5 18997696 18997938 -180632212 - MIR SINE MIR 0 262 5 628 109 10 0 chr5 18998055 18998156 -180631994 + L1MB4 LINE L1 6077 6178 -2 226 211 28 70 chr5 18998581 18998652 -180631498 + L2 LINE L2 3201 3268 -4 2233 91 3 10 chr5 18999076 18999373 -180630777 + AluSx SINE Alu 5 299 -13 21 0 0 0 chr5 19000085 19000106 -180630044 + AT_rich Low_complexity Low_complexity 1 21 0 1237 214 40 3 chr5 19000136 19000440 -180629710 - MER39 LTR ERV1 0 707 393 3544 33 0 0 chr5 19000484 19000903 -180629247 + L1PA5 LINE L1 5724 6142 -12 290 291 39 0 chr5 19000918 19001050 -180629100 - MER39 LTR ERV1 -320 387 115 233 174 0 0 chr5 19001077 19001123 -180629027 - MER39 LTR ERV1 -661 46 1 477 165 72 0 chr5 19001291 19001388 -180628762 + MER58C DNA MER1_type 112 215 0 708 139 23 8 chr5 19001997 19002126 -180628024 + MER20 DNA MER1_type 30 160 -59 1072 125 20 50 chr5 19002858 19003058 -180627092 + MER31A LTR ERV1 1 194 -291 807 239 27 0 chr5 19003870 19004054 -180626096 - AluJo SINE Alu -4 308 120 419 307 101 51 chr5 19004056 19004431 -180625719 - L1MC/D LINE L1 -456 5665 5394 1512 190 133 12 chr5 19004441 19004841 -180625309 - MER39 LTR ERV1 0 707 260 1256 172 96 98 chr5 19004847 19005213 -180624937 - MLT1A1 LTR MaLR 0 365 1 1028 148 0 13 chr5 19005515 19005670 -180624480 - AluJb SINE Alu -18 294 142 432 217 42 28 chr5 19005676 19005819 -180624331 + L1MA9 LINE L1 6143 6287 -25 4454 209 15 41 chr5 19005854 19006884 -180623266 + L1PA11 LINE L1 3 1005 -6576 11401 88 2 1 chr5 19006891 19008451 -180621699 - THE1B-int LTR MaLR -18 1562 1 1785 122 131 24 chr5 19008451 19008780 -180621370 - THE1B LTR MaLR 0 364 1 20685 155 8 10 chr5 19008780 19013651 -180616499 + L1PA11 LINE L1 2680 7551 -61 218 32 32 0 chr5 19013934 19013965 -180616185 + (TC)n Simple_repeat Simple_repeat 1 32 0 517 297 36 12 chr5 19014344 19014509 -180615641 - MIR SINE MIR -59 203 35 2435 118 30 57 chr5 19014526 19014966 -180615184 + MSTA LTR MaLR 1 428 0 2138 143 31 8 chr5 19014982 19015338 -180614812 + THE1B LTR MaLR 1 364 0 387 351 30 71 chr5 19015634 19015973 -180614177 + L1MEd LINE L1 244 568 -5551 2657 168 48 5 chr5 19016296 19016856 -180613294 + L1PB4 LINE L1 5573 6156 0 791 234 15 10 chr5 19017199 19017400 -180612750 - MER45C DNA AcHobo -751 202 1 284 179 77 6 chr5 19017400 19017477 -180612673 - MER90 LTR ERV1 -526 88 1 553 278 115 86 chr5 19017478 19017849 -180612301 - HAL1 LINE L1 -1873 634 233 507 119 24 0 chr5 19017849 19017977 -180612173 + L1PB1 LINE L1 6053 6182 0 553 278 115 86 chr5 19017977 19018218 -180611932 - HAL1 LINE L1 -2274 233 1 659 264 68 0 chr5 19018862 19019010 -180611140 - MER63A DNA MER1_type 0 210 53 3289 326 130 26 chr5 19021077 19023197 -180606953 - L2 LINE L2 0 3313 863 2039 116 71 14 chr5 19023197 19023550 -180606600 + THE1C LTR MaLR 1 373 -2 3289 326 130 26 chr5 19023550 19024197 -180605953 - L2 LINE L2 -2450 863 285 394 232 101 43 chr5 19024209 19024347 -180605803 - L2 LINE L2 -1 3312 3167 1832 200 42 26 chr5 19024628 19025083 -180605067 - MLT1C LTR MaLR 0 467 6 1468 174 82 55 chr5 19025339 19025719 -180604431 + MLT1B LTR MaLR 1 390 0 216 217 0 0 chr5 19025844 19025890 -180604260 - L2 LINE L2 -5 3308 3263 637 244 167 9 chr5 19026982 19027203 -180602947 + MIR SINE MIR 2 257 -5 207 0 0 0 chr5 19027672 19027695 -180602455 + (A)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 19028446 19028468 -180601682 + AT_rich Low_complexity Low_complexity 1 22 0 386 340 20 7 chr5 19030262 19030409 -180599741 + MER5A DNA MER1_type 40 188 -1 659 315 37 42 chr5 19030525 19030928 -180599222 + L2 LINE L2 2544 2944 -370 565 286 172 54 chr5 19032170 19032655 -180597495 - MLT1H1 LTR MaLR 0 555 16 413 289 78 94 chr5 19032665 19033038 -180597112 + L2 LINE L2 2946 3312 -1 180 333 14 0 chr5 19033474 19033546 -180596604 - MIR SINE MIR -1 261 189 27 73 0 0 chr5 19034818 19034873 -180595277 + AT_rich Low_complexity Low_complexity 1 55 0 5858 149 13 24 chr5 19035146 19036287 -180593863 + L1MA4 LINE L1 5160 6296 -4 23 33 0 0 chr5 19036287 19036317 -180593833 + AT_rich Low_complexity Low_complexity 1 30 0 1042 186 11 0 chr5 19037625 19037808 -180592342 - MER58A DNA MER1_type 0 224 40 5064 158 12 63 chr5 19037808 19038633 -180591517 + L1MA9 LINE L1 5117 5873 -439 2616 146 14 9 chr5 19038633 19039059 -180591091 + MSTA LTR MaLR 1 428 0 5064 158 12 63 chr5 19039059 19039454 -180590696 + L1MA9 LINE L1 5873 6287 -25 1839 164 37 11 chr5 19040222 19040576 -180589574 + L1MC1 LINE L1 5968 6330 -3 1191 251 152 15 chr5 19040778 19041294 -180588856 + MLT1G1 LTR MaLR 5 557 -10 22 0 0 0 chr5 19041580 19041602 -180588548 + AT_rich Low_complexity Low_complexity 1 22 0 273 145 14 29 chr5 19042563 19042632 -180587518 + CT-rich Low_complexity Low_complexity 1 68 0 423 309 104 31 chr5 19042708 19042996 -180587154 - MLT1L LTR MaLR -157 458 150 270 394 32 36 chr5 19043112 19043642 -180586508 + L2 LINE L2 2048 2575 -739 321 298 41 8 chr5 19043741 19043862 -180586288 + L2 LINE L2 3159 3283 -30 181 365 14 0 chr5 19044199 19044273 -180585877 + MIR3 SINE MIR 133 207 -1 308 281 243 29 chr5 19044920 19045083 -180585067 - MIR3 SINE MIR -66 142 7 534 316 73 66 chr5 19045393 19046243 -180583907 + L1MEc LINE L1 22 877 -5519 591 284 64 56 chr5 19046353 19046726 -180583424 + L1MEc LINE L1 1438 1813 -4583 201 154 0 0 chr5 19046788 19046827 -180583323 + T-rich Low_complexity Low_complexity 2 40 0 1769 251 139 9 chr5 19046854 19047772 -180582378 + L1MEc LINE L1 2623 3660 -2555 2258 126 0 3 chr5 19047825 19048134 -180582016 - AluSc SINE Alu -1 308 1 819 236 219 0 chr5 19048416 19048726 -180581424 + L2 LINE L2 1735 2112 -1202 317 212 64 136 chr5 19048736 19048874 -180581276 + MER112 DNA MER1_type 40 156 -104 5201 146 19 36 chr5 19048874 19049793 -180580357 - MER4D LTR ERV1 0 903 1 317 212 64 136 chr5 19049793 19049890 -180580260 + MER112 DNA MER1_type 156 258 -2 1726 315 134 10 chr5 19049894 19050949 -180579201 + L2 LINE L2 2118 3311 -2 2827 97 2 15 chr5 19050966 19051368 -180578782 + MSTA-int LTR MaLR 1184 1580 0 1473 153 216 46 chr5 19051368 19051734 -180578416 + MSTA LTR MaLR 1 428 0 314 310 138 76 chr5 19052114 19052511 -180577639 - L2 LINE L2 -1 3271 2850 315 335 102 42 chr5 19052636 19053117 -180577033 - L2 LINE L2 -665 2649 2140 303 206 55 0 chr5 19053670 19053743 -180576407 + MER69 DNA AcHobo 2450 2526 0 21 82 0 0 chr5 19053780 19053829 -180576321 + AT_rich Low_complexity Low_complexity 1 49 0 2059 120 0 0 chr5 19054267 19054558 -180575592 - AluSx SINE Alu -9 303 13 498 99 0 0 chr5 19054810 19054881 -180575269 + Alu SINE Alu 233 303 -6 320 286 122 0 chr5 19055136 19055234 -180574916 + MIR SINE MIR 37 146 -62 370 283 101 44 chr5 19055779 19055938 -180574212 - MIR3 SINE MIR -20 188 21 309 265 82 41 chr5 19056840 19056938 -180573212 + MIR SINE MIR 42 143 -65 267 191 103 0 chr5 19057588 19057656 -180572494 + L2 LINE L2 3221 3295 -18 200 246 88 35 chr5 19058364 19058421 -180571729 + MIR SINE MIR 84 143 -65 554 175 103 0 chr5 19058726 19058852 -180571298 - MER69 DNA AcHobo -5 2521 2383 290 279 174 75 chr5 19058964 19059125 -180571025 - MER5A DNA MER1_type 0 189 13 1998 233 100 50 chr5 19059275 19059446 -180570704 + Charlie2 DNA MER1_type 1858 2019 -843 1588 181 28 21 chr5 19059446 19059733 -180570417 + AluJo SINE Alu 1 289 -23 1998 233 100 50 chr5 19059733 19059830 -180570320 + Charlie2 DNA MER1_type 2019 2110 -752 1903 86 12 0 chr5 19059830 19060086 -180570064 - L1PA11 LINE L1 -5 6169 5911 1998 233 100 50 chr5 19060086 19060773 -180569377 + Charlie2 DNA MER1_type 2110 2862 0 1523 185 52 37 chr5 19060954 19061354 -180568796 - MLT1C LTR MaLR -2 388 1 537 305 80 25 chr5 19061370 19061882 -180568268 + L2 LINE L2 2005 2611 -703 191 278 37 0 chr5 19061884 19061938 -180568212 + L2 LINE L2 2756 2811 -503 1147 254 27 19 chr5 19061939 19062313 -180567837 + LTR37B LTR ERV1 77 453 -15 2027 125 3 22 chr5 19062456 19062811 -180567339 - AluSx SINE Alu 0 349 1 223 209 0 0 chr5 19062474 19062828 -180567322 + CT-rich Low_complexity Low_complexity 2 44 0 1424 126 22 37 chr5 19063556 19063827 -180566323 + L1MA8 LINE L1 6020 6286 -5 269 203 16 16 chr5 19064320 19064384 -180565766 + MER31-int LTR ERV1 3400 3463 -1473 915 229 30 60 chr5 19064700 19064832 -180565318 + MER99 DNA DNA 569 691 -137 2045 141 7 0 chr5 19064832 19065130 -180565020 - AluSx SINE Alu -11 301 2 915 229 30 60 chr5 19065130 19065264 -180564886 + MER99 DNA DNA 691 827 -1 1416 191 47 42 chr5 19065265 19065668 -180564482 + LTR37B LTR ERV1 57 461 -7 193 337 50 30 chr5 19065759 19065860 -180564290 + L2 LINE L2 3151 3253 -19 7462 86 16 6 chr5 19066068 19067220 -180562930 + L1MA1 LINE L1 5141 6302 0 365 244 144 82 chr5 19067542 19067910 -180562240 + MER110 LTR ERV1 80 440 -51 1031 233 0 0 chr5 19068836 19069042 -180561108 - MER58A DNA MER1_type 0 224 19 26 0 0 0 chr5 19069547 19069573 -180560577 + AT_rich Low_complexity Low_complexity 1 26 0 862 132 0 7 chr5 19070518 19070654 -180559496 + MLT2B2 LTR ERVL 5 139 -376 611 229 0 0 chr5 19070657 19070762 -180559388 + FLAM_A SINE Alu 12 116 -26 1029 202 19 38 chr5 19070769 19071048 -180559102 + MLT2B1 LTR ERVL 132 457 -63 1808 177 32 6 chr5 19071048 19071387 -180558763 + MER7A DNA MER2_type 1 346 0 1029 202 19 38 chr5 19071387 19071449 -180558701 + MLT2B1 LTR ERVL 457 519 -1 9541 26 10 206 chr5 19071803 19073528 -180556622 - SVA Other Other 0 1386 1 4128 55 19 21 chr5 19073736 19074303 -180555847 - SVA Other Other -820 566 1 33 0 0 0 chr5 19074463 19074496 -180555654 + AT_rich Low_complexity Low_complexity 1 33 0 1178 222 62 19 chr5 19074591 19074734 -180555416 + MLT1C LTR MaLR 87 222 -245 3265 179 136 22 chr5 19074734 19075475 -180554675 + LTR1B LTR ERV1 1 826 0 1178 222 62 19 chr5 19075475 19075701 -180554449 + MLT1C LTR MaLR 222 467 0 263 278 19 9 chr5 19075701 19075808 -180554342 - MER97c DNA MER1_type? -221 869 762 1862 203 150 61 chr5 19076100 19076838 -180553312 - LTR1B LTR ERV1 -13 813 10 1916 252 39 22 chr5 19076917 19077512 -180552638 - MER97c DNA MER1_type? -485 605 1 1429 161 61 21 chr5 19077543 19077924 -180552226 - MLT1C LTR MaLR 0 390 1 284 274 43 12 chr5 19078809 19078914 -180551236 - MIR SINE MIR -90 118 9 265 269 10 58 chr5 19081053 19081157 -180548993 + MLT1J LTR MaLR 35 133 -378 478 125 0 12 chr5 19081169 19081249 -180548901 - MSTA LTR MaLR 0 428 350 717 118 0 10 chr5 19081250 19081352 -180548798 - AluSg SINE Alu -209 101 1 1691 84 0 0 chr5 19081353 19081580 -180548570 - THE1A LTR MaLR -118 237 11 981 158 0 12 chr5 19081749 19081913 -180548237 + FRAM SINE Alu 3 164 -2 375 237 114 38 chr5 19082223 19082434 -180547716 - L1MC5 LINE L1 -35 7926 7700 1528 96 9 32 chr5 19082438 19082656 -180547494 + AluSp SINE Alu 90 302 -11 706 296 108 76 chr5 19083073 19083622 -180546528 - L2 LINE L2 0 3313 2738 1739 284 100 101 chr5 19083633 19085428 -180544722 - L2 LINE L2 -729 2585 793 509 270 8 0 chr5 19085437 19085563 -180544587 + MER33 DNA MER1_type 1 127 -197 998 304 44 44 chr5 19086460 19086911 -180543239 - L2 LINE L2 0 3313 2863 1105 208 38 58 chr5 19086944 19086985 -180543165 + MER96B DNA MER1_type? 25 65 -352 7532 32 0 1 chr5 19086985 19087886 -180542264 + L1PA4 LINE L1 5254 6153 -2 1105 208 38 58 chr5 19087886 19088244 -180541906 + MER96B DNA MER1_type? 65 416 -1 4649 188 54 20 chr5 19088282 19089357 -180540793 - L1MC3 LINE L1 0 7785 6675 27 29 0 0 chr5 19089468 19089502 -180540648 + AT_rich Low_complexity Low_complexity 1 34 0 201 196 0 0 chr5 19089766 19089812 -180540338 + CT-rich Low_complexity Low_complexity 4 49 0 977 180 41 8 chr5 19089931 19090175 -180539975 + MER65A-int LTR ERV1 5429 5680 -651 1338 256 50 27 chr5 19090182 19090662 -180539488 + MER65A-int LTR ERV1 4381 4871 0 1382 209 85 40 chr5 19090662 19091084 -180539066 + MER65A LTR ERV1 1 441 -4 933 333 85 9 chr5 19091120 19091669 -180538481 + L2 LINE L2 2714 3301 -12 372 43 0 0 chr5 19091800 19091846 -180538304 + (CA)n Simple_repeat Simple_repeat 2 47 0 206 192 19 0 chr5 19091851 19091903 -180538247 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 6636 206 10 11 chr5 19092304 19093856 -180536294 - L1P LINE L1 -2583 3563 2013 8178 172 13 21 chr5 19093859 19096358 -180533792 + L1PA13 LINE L1 3620 6159 -4 230 79 0 26 chr5 19096388 19096426 -180533724 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 273 330 146 0 chr5 19097581 19097684 -180532466 - L2 LINE L2 -5 3308 3191 1057 224 149 17 chr5 19098022 19098424 -180531726 + L1MC4 LINE L1 7438 7892 -150 1797 173 35 3 chr5 19098469 19098811 -180531339 - MLT2C2 LTR ERVL -111 353 1 283 311 74 7 chr5 19098857 19098992 -180531158 - L2 LINE L2 -924 2390 2247 313 278 20 80 chr5 19099311 19099397 -180530753 + MIR SINE MIR 65 140 -122 2428 103 0 0 chr5 19099397 19099709 -180530441 + AluSq SINE Alu 1 312 -1 313 278 20 80 chr5 19099709 19099773 -180530377 + MIR SINE MIR 140 206 -56 2494 64 0 0 chr5 19099837 19100134 -180530016 + AluY SINE Alu 1 297 -14 509 182 101 0 chr5 19100835 19100934 -180529216 - L2 LINE L2 -4 3309 3201 180 371 57 0 chr5 19100943 19101013 -180529137 - L2 LINE L2 -10 3262 3189 3371 169 13 2 chr5 19101143 19101746 -180528404 - MER72 LTR ERV1 -22 700 91 25 0 0 0 chr5 19102130 19102155 -180527995 + AT_rich Low_complexity Low_complexity 1 25 0 180 77 0 0 chr5 19102293 19102319 -180527831 + (CA)n Simple_repeat Simple_repeat 2 27 0 328 410 87 3 chr5 19102349 19102659 -180527491 - L2 LINE L2 -512 2802 2467 197 274 53 95 chr5 19103770 19103865 -180526285 - MER5A DNA MER1_type -7 182 92 182 271 51 34 chr5 19104990 19105049 -180525101 + MIR3 SINE MIR 118 177 -31 24 0 0 0 chr5 19105111 19105135 -180525015 + AT_rich Low_complexity Low_complexity 1 24 0 3583 134 4 11 chr5 19105563 19106094 -180524056 - MER1A DNA MER1_type 0 527 1 210 301 68 80 chr5 19106218 19106394 -180523756 + L3b LINE CR1 1322 1495 -88 222 37 0 0 chr5 19106395 19106422 -180523728 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 218 254 91 0 chr5 19106739 19106794 -180523356 + L3 LINE CR1 1425 1484 -93 528 221 8 25 chr5 19108179 19108301 -180521849 + MER94 DNA DNA 3 122 -12 22 0 0 0 chr5 19110211 19110233 -180519917 + AT_rich Low_complexity Low_complexity 1 22 0 734 189 47 21 chr5 19110545 19110735 -180519415 - MER20 DNA MER1_type -7 212 18 3789 155 138 7 chr5 19110821 19111551 -180518599 + LTR1B LTR ERV1 1 826 0 200 215 46 15 chr5 19111639 19111704 -180518446 - L3b LINE CR1 -197 1386 1320 415 134 98 0 chr5 19113920 19114002 -180516148 - MER34C LTR ERV1 0 585 496 1253 162 13 0 chr5 19114005 19114240 -180515910 + L1MA8 LINE L1 4817 5054 -1092 3729 147 30 4 chr5 19114346 19115221 -180514929 + L1MA8 LINE L1 5024 5912 -379 1922 190 16 13 chr5 19115221 19115605 -180514545 + MSTD LTR MaLR 1 385 -11 1799 131 31 47 chr5 19115607 19115988 -180514162 + L1MA8 LINE L1 5909 6283 -8 1647 206 42 44 chr5 19116010 19116486 -180513664 - MER34B LTR ERV1 -80 485 11 2162 252 136 8 chr5 19116496 19117415 -180512735 - L1ME3A LINE L1 -97 6073 5023 368 257 68 47 chr5 19117755 19117903 -180512247 - MIR SINE MIR -38 224 74 234 0 0 0 chr5 19118845 19118871 -180511279 + (A)n Simple_repeat Simple_repeat 1 26 0 407 223 19 0 chr5 19119234 19119337 -180510813 - Charlie4 DNA MER1_type -1829 132 28 400 204 57 70 chr5 19121208 19121365 -180508785 - Charlie4 DNA MER1_type 0 1961 1807 7755 158 39 28 chr5 19121365 19123068 -180507082 + L1MEc LINE L1 1 1806 -4620 1237 151 75 0 chr5 19123168 19123407 -180506743 - Tigger1 DNA MER2_type -2159 259 3 259 219 14 0 chr5 19123409 19123482 -180506668 - MER82 DNA MER2_type -453 200 127 2350 146 24 16 chr5 19123543 19123967 -180506183 - MSTA LTR MaLR 0 428 2 479 275 72 48 chr5 19123995 19124369 -180505781 - L1ME LINE L1 -471 5691 5309 390 291 106 20 chr5 19124574 19124828 -180505322 - L1ME LINE L1 -966 5180 4905 358 207 193 0 chr5 19124843 19124983 -180505167 - L1ME LINE L1 -1497 4649 4483 22 0 0 0 chr5 19125075 19125097 -180505053 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 19125134 19125177 -180504973 + AT_rich Low_complexity Low_complexity 1 43 0 267 261 59 17 chr5 19125187 19125306 -180504844 - L1ME LINE L1 -1954 4192 4069 2178 165 48 10 chr5 19126810 19127209 -180502941 - MLT2D LTR ERVL 0 414 1 628 76 0 0 chr5 19127210 19127302 -180502848 + L1PB1 LINE L1 6060 6151 0 2405 67 0 17 chr5 19127875 19128173 -180501977 - AluY SINE Alu -18 293 1 1995 118 0 0 chr5 19128307 19128586 -180501564 - AluY SINE Alu -32 279 1 2107 123 6 19 chr5 19128607 19128923 -180501227 - AluSx SINE Alu 0 312 1 2072 197 35 38 chr5 19128925 19129531 -180500619 + L1MEc LINE L1 2031 2600 -4007 1777 177 14 3 chr5 19129531 19129825 -180500325 + AluJb SINE Alu 1 297 -15 2072 197 35 38 chr5 19129825 19129945 -180500205 + L1MEc LINE L1 2600 2719 -3888 653 117 48 19 chr5 19129947 19130050 -180500100 + AluSx SINE Alu 3 108 -205 471 70 0 0 chr5 19130075 19130146 -180500004 + L1MC1 LINE L1 1926 1996 -4430 1476 116 14 0 chr5 19130146 19130353 -180499797 + AluSx SINE Alu 88 297 -15 7843 203 86 18 chr5 19130353 19132242 -180497908 + L1MC1 LINE L1 2672 4431 -2182 1123 214 78 42 chr5 19132242 19132574 -180497576 + MER2 DNA MER2_type 1 344 0 7843 203 86 18 chr5 19132574 19134348 -180495802 + L1MC1 LINE L1 4431 6600 -13 22 35 0 0 chr5 19134348 19134377 -180495773 + AT_rich Low_complexity Low_complexity 1 29 0 1013 188 79 4 chr5 19134383 19134649 -180495501 - Charlie4a DNA MER1_type -153 355 70 30480 39 34 5 chr5 19134661 19138682 -180491468 + L1PA3 LINE L1 2 4139 -2007 8650 24 2 0 chr5 19138782 19140566 -180489584 + L1PA3 LINE L1 4369 6154 -1 219 239 130 33 chr5 19140602 19140694 -180489456 - MIR SINE MIR -66 196 96 963 75 0 0 chr5 19140943 19141077 -180489073 + L1PA2 LINE L1 6022 6155 0 272 221 44 0 chr5 19141082 19141150 -180489000 - Charlie4a DNA MER1_type -421 87 17 1681 182 48 31 chr5 19141378 19141736 -180488414 + MLT1A1 LTR MaLR 1 364 -1 263 234 32 32 chr5 19142142 19142236 -180487914 + MLT1I LTR MaLR 291 384 -25 1195 200 39 60 chr5 19142557 19142926 -180487224 + MLT1A2 LTR MaLR 11 374 0 550 303 144 5 chr5 19143155 19143350 -180486800 - MIR SINE MIR -25 237 16 2040 82 3 57 chr5 19143520 19143851 -180486299 - L1PA13 LINE L1 -2 6161 5849 256 139 292 14 chr5 19143932 19144004 -180486146 + MER39 LTR ERV1 1 92 -615 478 165 91 0 chr5 19144014 19144135 -180486015 + LTR48 LTR ERV1 177 308 -479 516 234 98 61 chr5 19144144 19144478 -180485672 + LTR48 LTR ERV1 238 774 0 544 283 58 0 chr5 19144558 19144749 -180485401 - L2 LINE L2 0 3313 3112 3939 148 21 27 chr5 19144968 19145683 -180484467 - MER50 LTR ERV1 -23 711 1 1162 214 132 82 chr5 19146123 19146455 -180483695 + MLT1E2 LTR MaLR 111 477 -149 2351 99 3 0 chr5 19146455 19146767 -180483383 - AluSp SINE Alu 0 313 1 1162 214 132 82 chr5 19146767 19146925 -180483225 + MLT1E2 LTR MaLR 477 626 0 315 49 0 0 chr5 19147782 19147823 -180482327 + (TTAGGG)n Simple_repeat Simple_repeat 3 43 0 1561 177 9 47 chr5 19148035 19148352 -180481798 + AluJo SINE Alu 1 305 -7 190 261 43 0 chr5 19148659 19148705 -180481445 - L2 LINE L2 -8 3264 3217 * 476 256 135 42 chr5 19148674 19148889 -180481261 - MIR SINE MIR -19 243 9 227 219 207 0 chr5 19148954 19149036 -180481114 + HsTC2 DNA Tc2 7 105 -1793 22 0 0 0 chr5 19149083 19149105 -180481045 + AT_rich Low_complexity Low_complexity 1 22 0 296 260 10 50 chr5 19149117 19149217 -180480933 - L1MEd LINE L1 -5585 534 439 21 0 0 0 chr5 19149367 19149388 -180480762 + AT_rich Low_complexity Low_complexity 1 21 0 599 221 32 25 chr5 19149553 19149780 -180480370 - MER34 LTR ERV1 -45 520 273 347 252 38 15 chr5 19150214 19150345 -180479805 - MER65A LTR ERV1 -311 134 1 445 236 18 9 chr5 19150363 19150473 -180479677 - MER34 LTR ERV1 -431 111 1 1269 226 53 55 chr5 19150508 19150942 -180479208 - LTR47B LTR ERVL 0 443 11 270 0 0 0 chr5 19150953 19150983 -180479167 + (CA)n Simple_repeat Simple_repeat 2 31 0 198 167 0 0 chr5 19151374 19151410 -180478740 + (CA)n Simple_repeat Simple_repeat 1 36 0 2287 89 0 19 chr5 19151663 19151976 -180478174 + AluSx SINE Alu 1 307 -5 260 270 27 14 chr5 19151976 19152050 -180478100 + MER21B LTR ERV1 16 90 -773 423 268 33 55 chr5 19152103 19152274 -180477876 + MER21B LTR ERV1 98 266 -597 6305 148 34 12 chr5 19152274 19153469 -180476681 + L1PA11 LINE L1 4282 5518 -656 2272 84 14 3 chr5 19153469 19153765 -180476385 + AluY SINE Alu 1 299 -12 6305 148 34 12 chr5 19153765 19154436 -180475714 + L1PA11 LINE L1 5518 6173 -1 241 245 10 51 chr5 19154436 19154534 -180475616 - LTR55 LTR ERV -43 505 412 423 268 33 55 chr5 19154436 19154447 -180475703 + MER21B LTR ERV1 266 276 -587 442 166 18 142 chr5 19154652 19154821 -180475329 - MLT1A1 LTR MaLR -217 148 1 351 109 0 31 chr5 19154821 19154885 -180475265 - L1MA10 LINE L1 -48 6286 6225 11426 98 3 6 chr5 19155146 19156865 -180473285 - L1PA8 LINE L1 -948 5198 3485 6975 54 8 6 chr5 19156868 19157842 -180472308 + L1PA8 LINE L1 5184 6159 -13 1831 157 69 5 chr5 19158157 19158533 -180471617 - MSTA LTR MaLR -28 400 1 1167 297 144 19 chr5 19158533 19159308 -180470842 - L2 LINE L2 -71 3242 2367 651 165 30 8 chr5 19159490 19159623 -180470527 + Charlie4 DNA MER1_type 1826 1961 0 1695 186 0 3 chr5 19159646 19159953 -180470197 - LOR1a LTR ERV1 0 497 192 2428 108 32 2 chr5 19159953 19160353 -180469797 + LOR1-int LTR ERV1 2946 3357 -4763 1114 167 35 18 chr5 19160365 19160593 -180469557 + LOR1a LTR ERV1 266 497 0 2915 264 194 24 chr5 19160595 19161729 -180468421 - L2 LINE L2 -1113 2201 794 2334 113 0 0 chr5 19161729 19162029 -180468121 + AluSx SINE Alu 1 300 -12 2915 264 194 24 chr5 19162029 19162263 -180467887 - L2 LINE L2 -2520 794 601 482 315 289 3 chr5 19163019 19163330 -180466820 + L2 LINE L2 2908 3307 -6 239 152 0 0 chr5 19164242 19164288 -180465862 + LTR66 LTR ERVL 394 439 -171 348 127 0 0 chr5 19164290 19164345 -180465805 + (TA)n Simple_repeat Simple_repeat 2 56 0 182 150 25 0 chr5 19164860 19164900 -180465250 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 252 289 184 0 chr5 19165495 19165609 -180464541 + MIR3 SINE MIR 55 189 -19 1102 64 0 14 chr5 19165738 19165879 -180464271 + Alu SINE Alu 166 304 -7 225 247 236 0 chr5 19165908 19165997 -180464153 + MER5B DNA MER1_type 62 171 -7 267 276 0 0 chr5 19166675 19166733 -180463417 + MER81 DNA DNA 55 112 -2 693 259 79 40 chr5 19167594 19168015 -180462135 - LTR33 LTR ERVL -3 518 49 527 202 101 17 chr5 19168124 19168243 -180461907 + L2 LINE L2 3182 3310 -3 554 271 54 12 chr5 19168568 19168734 -180461416 + MER5B DNA MER1_type 6 178 0 183 170 75 38 chr5 19169109 19169162 -180460988 - MIR SINE MIR -72 190 136 424 298 103 4 chr5 19169504 19169837 -180460313 + L2 LINE L2 2781 3146 -167 856 299 12 8 chr5 19169846 19170100 -180460050 - MIR SINE MIR 0 262 8 234 266 0 0 chr5 19170121 19170185 -180459965 + L2 LINE L2 3167 3230 -83 2247 109 3 10 chr5 19170228 19170539 -180459611 - AluSx SINE Alu -3 309 1 303 301 24 0 chr5 19170544 19170627 -180459523 + L2 LINE L2 3225 3309 -4 210 37 0 0 chr5 19171220 19171247 -180458903 + (CA)n Simple_repeat Simple_repeat 1 27 0 2133 119 3 6 chr5 19173830 19174141 -180456009 - AluSx SINE Alu -1 311 2 234 0 0 0 chr5 19174600 19174626 -180455524 + (TG)n Simple_repeat Simple_repeat 2 27 0 1487 206 14 3 chr5 19174626 19174918 -180455232 - MLT1A1 LTR MaLR -3 362 68 429 20 0 0 chr5 19175016 19175066 -180455084 + (TG)n Simple_repeat Simple_repeat 1 50 0 226 284 12 37 chr5 19175360 19175441 -180454709 + L2 LINE L2 3108 3186 -86 * 285 293 193 19 chr5 19175437 19175649 -180454501 - MIR SINE MIR -13 249 1 25 31 0 0 chr5 19177123 19177155 -180452995 + AT_rich Low_complexity Low_complexity 1 32 0 282 119 0 2 chr5 19177156 19177206 -180452944 + L1M3 LINE L1 5474 5522 -649 678 263 10 36 chr5 19177327 19177521 -180452629 + Charlie1a DNA MER1_type 4 192 -1263 1145 224 65 63 chr5 19177527 19177957 -180452193 + MER39 LTR ERV1 1 619 -88 4877 195 25 23 chr5 19178025 19179057 -180451093 + Charlie1a DNA MER1_type 194 1227 -228 994 186 38 113 chr5 19179062 19179380 -180450770 - L1MA7 LINE L1 -22 6290 5997 620 209 139 11 chr5 19179381 19179568 -180450582 + Charlie1a DNA MER1_type 1245 1455 0 182 300 33 17 chr5 19180628 19180688 -180449462 - MIR SINE MIR -200 62 2 273 98 0 0 chr5 19180757 19180798 -180449352 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 225 0 0 0 chr5 19180924 19180949 -180449201 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2375 181 66 70 chr5 19181325 19181867 -180448283 - MLT1F LTR MaLR 0 542 3 281 344 91 82 chr5 19182193 19182533 -180447617 - L2 LINE L2 -105 3167 2825 827 305 82 77 chr5 19183296 19184216 -180445934 - L1MEd LINE L1 -5192 927 4 207 300 33 0 chr5 19185481 19185541 -180444609 + MIR SINE MIR 9 70 -192 2265 175 8 3 chr5 19185569 19185952 -180444198 + MLT1B LTR MaLR 6 390 0 2219 147 73 52 chr5 19185996 19186056 -180444094 - MSTB1 LTR MaLR 0 432 375 2375 97 0 3 chr5 19186056 19186364 -180443786 - AluY SINE Alu -4 307 1 2219 147 73 52 chr5 19186364 19186726 -180443424 - MSTB1 LTR MaLR -57 375 1 2749 23 0 0 chr5 19186746 19187049 -180443101 + AluYb8 SINE Alu 1 303 -15 219 36 0 0 chr5 19187049 19187077 -180443073 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 21 36 0 0 chr5 19187184 19187212 -180442938 + AT_rich Low_complexity Low_complexity 1 28 0 2055 155 0 0 chr5 19191053 19191356 -180438794 + AluSx SINE Alu 1 303 -9 239 216 59 0 chr5 19191614 19191665 -180438485 - MER82 DNA MER2_type -395 258 205 2117 80 77 0 chr5 19191666 19191952 -180438198 + AluY SINE Alu 1 308 -3 1980 157 40 3 chr5 19191976 19192327 -180437823 - Tigger1 DNA MER2_type 0 2418 2055 39157 82 16 6 chr5 19192332 19198415 -180431735 - L1PA6 LINE L1 0 6154 11 4389 125 68 1 chr5 19198433 19199121 -180431029 - Tigger1 DNA MER2_type -334 2084 1351 * 6893 130 50 2 chr5 19199107 19200167 -180429983 - Tigger1 DNA MER2_type -1305 1113 3 292 219 14 0 chr5 19200169 19200242 -180429908 - MER82 DNA MER2_type -453 200 127 626 282 66 48 chr5 19200244 19200303 -180429847 - L1ME LINE L1 -396 5774 5718 2550 146 24 16 chr5 19200303 19200727 -180429423 - MSTA LTR MaLR 0 428 2 626 282 66 48 chr5 19200727 19201130 -180429020 - L1ME LINE L1 -452 5718 5309 290 245 168 34 chr5 19201234 19201532 -180428618 - L1ME LINE L1 -846 5300 4963 255 228 297 43 chr5 19201604 19202069 -180428081 - L1ME LINE L1 -1497 4649 4067 2353 168 48 10 chr5 19203572 19203971 -180426179 - MLT2D LTR ERVL 0 414 1 675 76 0 0 chr5 19203972 19204064 -180426086 + L1PB1 LINE L1 6060 6151 0 2421 71 0 14 chr5 19204637 19204934 -180425216 - AluY SINE Alu -18 293 1 2234 125 0 0 chr5 19205028 19205333 -180424817 - AluSx SINE Alu -7 305 1 214 233 0 0 chr5 19205746 19205789 -180424361 - L2 LINE L2 -2 3311 3269 1183 184 142 63 chr5 19207133 19207464 -180422686 + MLT1A1 LTR MaLR 1 357 -8 424 246 25 34 chr5 19207594 19207740 -180422410 + MIR SINE MIR 27 172 -63 230 274 17 120 chr5 19207943 19208060 -180422090 + MER5B DNA MER1_type 6 110 -68 236 109 0 22 chr5 19208913 19208959 -180421191 + (CA)n Simple_repeat Simple_repeat 2 46 0 183 156 0 0 chr5 19208961 19208993 -180421157 + (TG)n Simple_repeat Simple_repeat 1 32 0 303 335 164 7 chr5 19209188 19209340 -180420810 - MLT1L LTR MaLR -88 527 352 723 253 40 20 chr5 19209934 19210132 -180420018 - MLT1A2 LTR MaLR -16 358 157 615 202 8 0 chr5 19210224 19210343 -180419807 + MER96B DNA MER1_type? 298 417 0 21 71 0 0 chr5 19210411 19210453 -180419697 + AT_rich Low_complexity Low_complexity 1 42 0 297 320 33 53 chr5 19211543 19211693 -180418457 + MIR3 SINE MIR 30 176 -32 1613 222 57 22 chr5 19211979 19212531 -180417619 - MER90 LTR ERV1 0 614 5 811 165 256 6 chr5 19213361 19213525 -180416625 - MER7A DNA MER2_type -143 203 1 1106 187 74 37 chr5 19213531 19213830 -180416320 + L1MC5 LINE L1 7601 7910 -51 2180 95 39 0 chr5 19213832 19214117 -180416033 + AluSq SINE Alu 1 296 -17 23 0 0 0 chr5 19214127 19214150 -180416000 + AT_rich Low_complexity Low_complexity 1 23 0 267 305 153 3 chr5 19214460 19214639 -180415511 + MIR SINE MIR 4 262 0 2050 198 24 55 chr5 19214740 19215245 -180414905 - MER65B LTR ERV1 -42 489 1 2358 152 33 35 chr5 19215248 19215677 -180414473 - Tigger2a DNA MER2_type 0 434 7 306 309 72 15 chr5 19216277 19216470 -180413680 - MIR SINE MIR 0 208 5 257 128 21 0 chr5 19216542 19216589 -180413561 + GA-rich Low_complexity Low_complexity 5 52 0 25 95 0 0 chr5 19216657 19216731 -180413419 + AT_rich Low_complexity Low_complexity 1 74 0 2464 58 0 32 chr5 19216811 19217120 -180413030 - AluY SINE Alu -12 299 1 2930 76 98 5 chr5 19217307 19217717 -180412433 + LTR7 LTR ERV1 1 448 -2 17487 96 7 22 chr5 19217719 19220290 -180409860 + HERVH LTR ERV1 1 2532 -5181 1041 169 0 0 chr5 19220282 19220460 -180409690 + HERVH LTR ERV1 2810 2987 -4726 * 913 130 20 0 chr5 19220454 19220600 -180409550 + HERVH LTR ERV1 3140 3288 -4425 * 3400 113 4 8 chr5 19220592 19221095 -180409055 + HERVH LTR ERV1 3492 3992 -3721 4520 135 0 1 chr5 19221098 19221758 -180408392 + HERVH LTR ERV1 4488 5146 -2567 1349 126 17 42 chr5 19221741 19221979 -180408171 + HERVH LTR ERV1 5588 5819 -1894 * 2396 94 53 13 chr5 19221980 19222354 -180407796 + HERVH LTR ERV1 7325 7713 0 3014 71 95 5 chr5 19222354 19222765 -180407385 + LTR7 LTR ERV1 1 448 -2 680 245 37 0 chr5 19223599 19223762 -180406388 - MIR SINE MIR -38 224 56 639 189 79 31 chr5 19224627 19224754 -180405396 + FLAM_A SINE Alu 1 133 0 252 0 0 0 chr5 19225475 19225503 -180404647 + (CCCCAG)n Simple_repeat Simple_repeat 4 31 0 250 325 0 0 chr5 19225596 19225676 -180404474 - MIR SINE MIR -19 243 164 180 338 88 0 chr5 19225684 19225764 -180404386 + MIR SINE MIR 17 103 -159 875 265 111 21 chr5 19226038 19226363 -180403787 + L1MC5 LINE L1 5537 5890 -1918 23 54 0 0 chr5 19226625 19226662 -180403488 + AT_rich Low_complexity Low_complexity 1 37 0 1541 171 30 23 chr5 19226672 19226971 -180403179 + AluJb SINE Alu 1 301 -11 1960 108 90 4 chr5 19226977 19227254 -180402896 + AluSx SINE Alu 1 301 -11 2124 172 6 6 chr5 19227584 19227945 -180402205 + MLT2D LTR ERVL 1 361 -53 294 148 0 0 chr5 19227946 19228000 -180402150 + (GA)n Simple_repeat Simple_repeat 2 55 0 266 93 70 0 chr5 19228000 19228043 -180402107 + MLT2D LTR ERVL 419 464 0 252 351 92 30 chr5 19228131 19228262 -180401888 + L2 LINE L2 3128 3266 -6 207 361 37 9 chr5 19229564 19229672 -180400478 - MIR SINE MIR -149 113 3 251 232 101 0 chr5 19229673 19229742 -180400408 + L1ME LINE L1 5597 5672 -449 * 1435 209 84 134 chr5 19229735 19230788 -180399362 + L1MC5 LINE L1 6778 7765 -196 390 57 0 0 chr5 19230788 19230841 -180399309 + (TG)n Simple_repeat Simple_repeat 1 53 0 1435 209 84 134 chr5 19230841 19230995 -180399155 + L1MC5 LINE L1 7765 7925 -36 719 282 41 15 chr5 19231951 19232217 -180397933 - LTR16A LTR ERVL -5 445 173 372 267 80 17 chr5 19232783 19232959 -180397191 - HERV16 LTR ERVL -793 4971 4785 1875 112 19 0 chr5 19232972 19233240 -180396910 - AluSx SINE Alu -39 273 1 4537 118 103 78 chr5 19233335 19234773 -180395377 + pTR5 LTR ERV1 66 2438 0 870 356 6 6 chr5 19234847 19235190 -180394960 - HERV16 LTR ERVL -1114 4540 4198 1447 305 73 22 chr5 19235198 19235896 -180394254 - HERV16 LTR ERVL -2716 2280 1705 458 324 19 24 chr5 19235913 19236126 -180394024 - HERV16 LTR ERVL -3429 1567 1356 517 312 13 0 chr5 19236169 19236326 -180393824 - HERV16 LTR ERVL -3653 1343 1185 695 130 0 43 chr5 19236326 19236441 -180393709 - Tigger7 DNA MER2_type 0 2491 2382 * 3331 155 55 0 chr5 19236435 19236976 -180393174 - Tigger7 DNA MER2_type -162 571 1 1936 148 63 27 chr5 19236978 19237310 -180392840 + MER2 DNA MER2_type 1 344 0 2684 276 83 38 chr5 19237311 19237699 -180392451 - HERV16 LTR ERVL -3811 1185 816 1167 230 5 0 chr5 19237699 19237916 -180392234 - MER58A DNA MER1_type -4 220 3 2684 276 83 38 chr5 19237916 19238659 -180391491 - HERV16 LTR ERVL -4180 816 3 774 272 134 55 chr5 19238675 19239079 -180391071 - LTR16A LTR ERVL -14 436 1 374 212 10 0 chr5 19239322 19239421 -180390729 + GA-rich Low_complexity Low_complexity 4 103 0 387 0 0 0 chr5 19240239 19240282 -180389868 + (CA)n Simple_repeat Simple_repeat 2 44 0 644 272 136 17 chr5 19240542 19240843 -180389307 + MER46C DNA MER2_type 2 338 0 264 267 147 42 chr5 19240955 19241146 -180389004 - MIR SINE MIR -32 230 20 2162 214 25 23 chr5 19241261 19241776 -180388374 + Charlie1b DNA MER1_type 7 522 -1 742 270 109 0 chr5 19241776 19241987 -180388163 + MIR SINE MIR 8 241 -21 451 146 109 88 chr5 19242898 19243035 -180387115 + MIR SINE MIR 79 218 -44 805 246 218 36 chr5 19243121 19243620 -180386530 - MLT1G LTR MaLR 0 590 1 1952 120 39 0 chr5 19243786 19244069 -180386081 + AluSx SINE Alu 1 294 -18 358 266 16 14 chr5 19244447 19244584 -180385566 - MLT1J LTR MaLR -291 194 21 23 33 0 0 chr5 19244600 19244630 -180385520 + AT_rich Low_complexity Low_complexity 1 30 0 2111 104 0 0 chr5 19245194 19245462 -180384688 + AluSx SINE Alu 35 302 -10 253 197 171 13 chr5 19245497 19245573 -180384577 + MIR SINE MIR 82 169 -93 2468 75 0 0 chr5 19245872 19246177 -180383973 - AluY SINE Alu -6 305 1 478 90 0 0 chr5 19246342 19246409 -180383741 + L1MA1 LINE L1 6232 6298 -4 1769 168 3 10 chr5 19247056 19247354 -180382796 + AluJo SINE Alu 1 296 -16 234 253 259 46 chr5 19248092 19248266 -180381884 - MIR SINE MIR -18 244 34 362 226 156 52 chr5 19249803 19250015 -180380135 - MIR SINE MIR -28 234 1 245 100 20 0 chr5 19250855 19250905 -180379245 + (TA)n Simple_repeat Simple_repeat 2 52 0 1353 152 43 5 chr5 19251012 19251223 -180378927 + MER20 DNA MER1_type 1 219 0 2533 65 0 3 chr5 19251508 19251816 -180378334 + AluY SINE Alu 1 307 -4 833 224 36 18 chr5 19251954 19252173 -180377977 + MER58A DNA MER1_type 2 224 0 197 263 26 118 chr5 19252245 19252321 -180377829 + MER5A DNA MER1_type 1 69 -120 905 153 71 53 chr5 19253398 19253568 -180376582 - AluJb SINE Alu -7 305 133 257 222 181 0 chr5 19255057 19255129 -180375021 + MIR SINE MIR 63 147 -115 700 192 46 91 chr5 19256255 19256474 -180373676 + MER3 DNA MER1_type 1 209 0 2032 249 107 29 chr5 19256566 19257302 -180372848 + L1ME3A LINE L1 5288 6123 -47 1809 148 80 19 chr5 19257302 19257626 -180372524 + MER2 DNA MER2_type 1 344 0 2032 249 107 29 chr5 19257626 19257673 -180372477 + L1ME3A LINE L1 6123 6165 -5 279 233 41 41 chr5 19257740 19257813 -180372337 + MIR SINE MIR 184 256 -6 721 212 0 29 chr5 19257871 19258008 -180372142 - FLAM_A SINE Alu 0 133 1 2174 271 117 16 chr5 19258241 19259228 -180370922 - L2 LINE L2 -106 3207 2119 1627 183 39 3 chr5 19259685 19259970 -180370180 + AluJb SINE Alu 1 295 -17 1619 188 58 50 chr5 19261449 19261810 -180368340 + MLT1A1 LTR MaLR 2 365 0 269 245 53 21 chr5 19262090 19262184 -180367966 - L2 LINE L2 -4 3309 3213 933 215 88 8 chr5 19263671 19263922 -180366228 - MER33 DNA MER1_type -13 311 41 2277 84 0 7 chr5 19263977 19264276 -180365874 + AluSx SINE Alu 1 297 -15 305 300 114 64 chr5 19264416 19264760 -180365390 + L2 LINE L2 2736 3102 -211 1471 215 217 25 chr5 19264770 19265207 -180364943 - MLT1F LTR MaLR 0 542 22 435 228 0 0 chr5 19265264 19265343 -180364807 - MER81 DNA DNA -34 80 2 279 224 214 10 chr5 19265367 19265465 -180364685 + L2 LINE L2 3192 3309 -4 207 0 0 0 chr5 19266146 19266169 -180363981 + (T)n Simple_repeat Simple_repeat 1 23 0 2387 142 83 0 chr5 19266813 19267208 -180362942 + MSTA LTR MaLR 1 428 0 257 251 133 94 chr5 19267931 19268082 -180362068 + MIR SINE MIR 3 160 -48 1715 199 53 3 chr5 19268103 19268425 -180361725 - MER58B DNA MER1_type 0 341 4 395 328 23 0 chr5 19268430 19268561 -180361589 - MIR SINE MIR -66 196 63 216 135 0 0 chr5 19271960 19271997 -180358153 + (T)n Simple_repeat Simple_repeat 1 37 0 383 331 55 44 chr5 19273398 19273579 -180356571 - MIR3 SINE MIR -23 185 3 3127 66 37 12 chr5 19273820 19274227 -180355923 + L1PA11 LINE L1 5758 6174 0 2141 174 63 10 chr5 19274493 19274908 -180355242 - L1MB7 LINE L1 0 6184 5748 1093 161 22 0 chr5 19275602 19275782 -180354368 + MER5A DNA MER1_type 2 185 -4 288 264 208 0 chr5 19276726 19276851 -180353299 + MIR SINE MIR 80 230 -32 563 271 0 12 chr5 19277255 19277280 -180352870 - L1MA10 LINE L1 -3 6331 6307 2551 216 78 45 chr5 19277280 19277984 -180352166 - L1ME1 LINE L1 -19 6147 5421 348 352 164 30 chr5 19280837 19281240 -180348910 - L2 LINE L2 -9 3263 2807 280 208 59 79 chr5 19281678 19281779 -180348371 - L2 LINE L2 0 3313 3215 22 0 0 0 chr5 19281991 19282013 -180348137 + AT_rich Low_complexity Low_complexity 1 22 0 559 123 0 0 chr5 19282691 19282764 -180347386 - AluJ/FLAM SINE Alu -233 79 7 279 312 172 19 chr5 19283777 19283934 -180346216 - MIR3 SINE MIR -5 203 23 333 239 84 35 chr5 19285282 19285424 -180344726 - MER5A DNA MER1_type -40 149 1 2210 220 70 42 chr5 19285482 19286104 -180344046 + L1MEc LINE L1 35 679 -5717 2391 91 0 3 chr5 19286104 19286413 -180343737 + AluSc SINE Alu 1 308 -1 2210 220 70 42 chr5 19286413 19286457 -180343693 + L1MEc LINE L1 679 720 -5676 23 0 0 0 chr5 19287272 19287295 -180342855 + AT_rich Low_complexity Low_complexity 1 23 0 420 251 0 26 chr5 19287880 19288001 -180342149 - MIR SINE MIR -69 193 77 227 286 0 0 chr5 19288373 19288422 -180341728 - L2 LINE L2 -14 3258 3210 201 304 179 0 chr5 19288643 19288755 -180341395 + L2 LINE L2 3178 3309 -4 826 182 0 0 chr5 19289038 19289170 -180340980 + FLAM_C SINE Alu 1 132 -1 333 0 0 0 chr5 19289496 19289533 -180340617 + (TC)n Simple_repeat Simple_repeat 1 37 0 189 0 0 0 chr5 19289532 19289553 -180340597 + (CA)n Simple_repeat Simple_repeat 1 21 0 * 21 0 0 0 chr5 19291542 19291563 -180338587 + AT_rich Low_complexity Low_complexity 1 21 0 2909 103 31 10 chr5 19291643 19292060 -180338090 + MSTA LTR MaLR 1 426 -2 4951 161 41 11 chr5 19292062 19292923 -180337227 + MSTA-int LTR MaLR 1 887 -764 1575 74 0 0 chr5 19292923 19293113 -180337037 + AluY SINE Alu 104 293 -18 1235 273 84 18 chr5 19293536 19293975 -180336175 - MLT1J LTR MaLR -43 468 1 806 196 116 6 chr5 19294118 19294291 -180335859 - MER58A DNA MER1_type -23 201 10 445 254 95 0 chr5 19294403 19294529 -180335621 - MIR SINE MIR -12 250 113 290 221 90 41 chr5 19295023 19295145 -180335005 - MER117 DNA MER1_type -51 146 19 4257 119 53 25 chr5 19295446 19295731 -180334419 - Tigger3(Golem) DNA MER2_type 0 3029 2754 2089 132 3 0 chr5 19295731 19296027 -180334123 + AluJb SINE Alu 1 297 -15 4257 119 53 25 chr5 19296027 19296471 -180333679 - Tigger3(Golem) DNA MER2_type -275 2754 2279 467 202 149 0 chr5 19296463 19296557 -180333593 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 724 260 20 59 chr5 19298416 19298670 -180331480 - MIR SINE MIR -5 257 14 2050 133 0 7 chr5 19298822 19299145 -180331005 - AluSx SINE Alu 0 321 1 24 32 0 0 chr5 19299223 19299254 -180330896 + AT_rich Low_complexity Low_complexity 1 31 0 2488 64 0 7 chr5 19299260 19299558 -180330592 - AluY SINE Alu -15 296 1 460 250 72 7 chr5 19299588 19299740 -180330410 + MLT1H1 LTR MaLR 2 163 -392 233 248 138 18 chr5 19299764 19299873 -180330277 + L1ME LINE L1 5785 5906 -215 2298 88 16 7 chr5 19300688 19300993 -180329157 + AluSg1 SINE Alu 1 308 -1 2933 80 8 0 chr5 19301195 19301558 -180328592 - L1PA10 LINE L1 -4 6164 5799 253 357 0 0 chr5 19301918 19302016 -180328134 - MIR SINE MIR -1 261 164 180 338 88 0 chr5 19302024 19302104 -180328046 + MIR SINE MIR 17 103 -159 866 268 111 21 chr5 19302378 19302703 -180327447 + L1MC4a LINE L1 5537 5890 -1918 23 54 0 0 chr5 19302965 19303002 -180327148 + AT_rich Low_complexity Low_complexity 1 37 0 888 172 30 86 chr5 19303012 19303280 -180326870 + AluJo SINE Alu 1 253 -59 180 0 0 0 chr5 19303321 19303341 -180326809 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 194 234 181 21 chr5 19304909 19305003 -180325147 + L2 LINE L2 3136 3244 -28 817 149 32 4 chr5 19305952 19306174 -180323976 - AluJb SINE Alu -1 311 2 1832 144 9 41 chr5 19309206 19309526 -180320624 + AluJb SINE Alu 2 311 -1 2220 114 0 40 chr5 19309998 19310323 -180319827 + AluSx SINE Alu 1 312 0 2457 204 2 2 chr5 19310596 19311012 -180319138 + MER47B DNA MER2_type 1 416 -2 1880 143 199 6 chr5 19311123 19311480 -180318670 - MSTB LTR MaLR 0 426 1 367 240 31 21 chr5 19312254 19312350 -180317800 + MLT1J LTR MaLR 82 178 -333 1056 212 25 17 chr5 19312366 19312607 -180317543 + MER57-int LTR ERV1 4 246 -7291 572 163 54 16 chr5 19313251 19313380 -180316770 + MER57-int LTR ERV1 302 435 -4501 2951 87 3 0 chr5 19314027 19314396 -180315754 - L1PB1 LINE L1 0 6151 5782 300 97 48 0 chr5 19314396 19314458 -180315692 + (TA)n Simple_repeat Simple_repeat 2 66 0 2085 81 0 0 chr5 19314460 19314731 -180315419 - L1PB1 LINE L1 -360 5791 5521 438 304 22 27 chr5 19315892 19316076 -180314074 + MER5A DNA MER1_type 1 183 -6 804 191 0 7 chr5 19316312 19316453 -180313697 + FLAM_C SINE Alu 2 141 -2 186 266 138 75 chr5 19316811 19316905 -180313245 + L2 LINE L2 3127 3226 -46 274 217 89 72 chr5 19317175 19317355 -180312795 - Charlie7 DNA MER1_type -9 2603 2421 279 240 146 0 chr5 19317355 19317451 -180312699 + L1MC/D LINE L1 5714 5823 -1985 330 189 25 8 chr5 19317541 19317788 -180312362 + (TA)n Simple_repeat Simple_repeat 1 251 0 275 250 62 0 chr5 19317818 19317914 -180312236 + GA-rich Low_complexity Low_complexity 3 104 0 180 264 0 57 chr5 19318213 19318266 -180311884 - L2 LINE L2 -80 3192 3143 2217 99 0 3 chr5 19319799 19320121 -180310029 - AluSg SINE Alu 0 310 1 245 130 0 0 chr5 19320158 19320204 -180309946 - MADE1 DNA Mariner 0 80 35 25 0 0 0 chr5 19320204 19320229 -180309921 + AT_rich Low_complexity Low_complexity 1 25 0 1707 191 33 3 chr5 19322215 19322518 -180307632 + AluJo SINE Alu 1 312 0 204 200 0 0 chr5 19322518 19322563 -180307587 + GA-rich Low_complexity Low_complexity 2 46 0 1596 233 76 42 chr5 19322565 19323115 -180307035 - L1MD3 LINE L1 -23 7972 7404 348 204 0 139 chr5 19323115 19323223 -180306927 - MLT1F1 LTR MaLR -442 125 33 362 187 73 107 chr5 19323242 19323392 -180306758 - L1MD3 LINE L1 -903 7092 6948 322 247 138 122 chr5 19324358 19324893 -180305257 - L1M2 LINE L1 -5452 1397 773 1758 187 42 79 chr5 19325254 19325682 -180304468 - MLT2D LTR ERVL -2 412 1 193 200 17 33 chr5 19326194 19326254 -180303896 - MIR SINE MIR -26 236 178 947 291 140 6 chr5 19326356 19326720 -180303430 + LTR16A LTR ERVL 26 438 -12 416 223 11 0 chr5 19326742 19326836 -180303314 - MIR SINE MIR -156 106 12 2564 68 0 0 chr5 19327346 19327654 -180302496 - AluY SINE Alu -3 308 1 618 254 14 0 chr5 19328305 19328447 -180301703 - MER58B DNA MER1_type 0 341 198 21 36 0 0 chr5 19328789 19328817 -180301333 + AT_rich Low_complexity Low_complexity 1 28 0 338 191 169 0 chr5 19329600 19329689 -180300461 + LTR16A LTR ERVL 342 445 -5 681 223 32 27 chr5 19329847 19330035 -180300115 + MIR SINE MIR 27 215 -47 2111 102 39 0 chr5 19330136 19330420 -180299730 + AluSx SINE Alu 1 295 -17 210 222 16 32 chr5 19330511 19330574 -180299576 + GA-rich Low_complexity Low_complexity 3 64 0 341 268 134 30 chr5 19330666 19330830 -180299320 - MIR SINE MIR -22 240 60 193 330 128 34 chr5 19330926 19331105 -180299045 - L2 LINE L2 -4 3268 3073 2042 87 0 4 chr5 19331789 19332043 -180298107 + AluSg SINE Alu 1 253 -57 2483 48 10 0 chr5 19332596 19332887 -180297263 - AluY SINE Alu -17 294 1 773 300 185 13 chr5 19333195 19333649 -180296501 - LTR67 LTR ERVL -10 547 16 528 168 72 32 chr5 19333712 19333837 -180296313 + FLAM_C SINE Alu 1 130 -3 414 285 31 15 chr5 19334422 19334552 -180295598 - L2 LINE L2 0 3272 3141 183 343 85 20 chr5 19336671 19336872 -180293278 - MIR SINE MIR -20 242 29 1435 127 5 0 chr5 19337044 19337241 -180292909 + AluSg/x SINE Alu 85 282 -30 297 243 135 9 chr5 19337497 19337608 -180292542 - MIR3 SINE MIR -1 207 83 346 309 8 0 chr5 19337988 19338111 -180292039 - MIR SINE MIR -29 233 110 2310 67 0 7 chr5 19338238 19338522 -180291628 - AluY SINE Alu -2 309 28 820 187 19 16 chr5 19340646 19340892 -180289258 + MLT1A1 LTR MaLR 1 365 0 2155 125 3 0 chr5 19340958 19341262 -180288888 + AluSg SINE Alu 6 310 0 628 43 22 11 chr5 19341274 19341366 -180288784 + (GGAA)n Simple_repeat Simple_repeat 2 94 0 293 310 23 0 chr5 19341566 19341625 -180288525 - L1MA10 LINE L1 -7 6327 6269 356 238 50 44 chr5 19341625 19341785 -180288365 - L1ME2 LINE L1 -57 6107 5947 3116 205 72 38 chr5 19342377 19342938 -180287212 - L1ME1 LINE L1 -5 6161 5621 2276 107 0 0 chr5 19342938 19343236 -180286914 + AluSx SINE Alu 1 298 -14 3116 205 72 38 chr5 19343236 19343515 -180286635 - L1ME1 LINE L1 -545 5621 5353 2321 108 0 0 chr5 19343515 19343820 -180286330 - AluSq SINE Alu -8 305 1 3116 205 72 38 chr5 19343820 19344362 -180285788 - L1ME1 LINE L1 -813 5353 4739 433 256 33 0 chr5 19344973 19345094 -180285056 + MIR SINE MIR 117 241 -21 198 0 0 0 chr5 19345120 19345142 -180285008 + (CAG)n Simple_repeat Simple_repeat 2 23 0 1710 185 3 3 chr5 19345709 19346012 -180284138 - AluJo SINE Alu -9 303 1 279 223 202 0 chr5 19348008 19348102 -180282048 + MLT1I LTR MaLR 281 393 -16 574 152 43 0 chr5 19348378 19348470 -180281680 + MLT1A2 LTR MaLR 277 372 -2 22 0 0 0 chr5 19349810 19349832 -180280318 + AT_rich Low_complexity Low_complexity 1 22 0 2015 178 123 5 chr5 19350234 19350650 -180279500 + L1MB5 LINE L1 5710 6174 0 1567 189 173 16 chr5 19351263 19351697 -180278453 - MLT1D LTR MaLR -3 502 1 435 272 34 28 chr5 19352732 19352945 -180277205 + L1ME4a LINE L1 5734 5949 -213 289 248 15 22 chr5 19352955 19353092 -180277058 + (TA)n Simple_repeat Simple_repeat 2 137 0 302 225 50 0 chr5 19354244 19354324 -180275826 - L1ME2 LINE L1 -246 5875 5792 483 298 93 54 chr5 19354400 19354699 -180275451 + L2 LINE L2 2912 3231 -82 2044 138 3 3 chr5 19354699 19354996 -180275154 - AluSx SINE Alu -15 297 1 483 298 93 54 chr5 19354996 19355082 -180275068 + L2 LINE L2 3231 3312 -1 354 243 46 33 chr5 19355111 19355263 -180274887 + L1ME4a LINE L1 5967 6120 -1 21 36 0 0 chr5 19355441 19355469 -180274681 + AT_rich Low_complexity Low_complexity 1 28 0 2390 60 10 17 chr5 19355698 19355998 -180274152 - AluY SINE Alu -7 304 7 21 36 0 0 chr5 19356110 19356138 -180274012 + AT_rich Low_complexity Low_complexity 1 28 0 2228 108 0 0 chr5 19356379 19356674 -180273476 - AluSx SINE Alu -17 295 1 693 201 136 0 chr5 19357396 19357565 -180272585 + MSTD LTR MaLR 1 192 -204 301 241 0 0 chr5 19357565 19357648 -180272502 + A-rich Low_complexity Low_complexity 1 83 0 1010 188 0 11 chr5 19357657 19357833 -180272317 + FRAM SINE Alu 1 173 -3 1104 195 39 0 chr5 19357833 19358038 -180272112 + MSTD LTR MaLR 184 396 0 2429 70 0 0 chr5 19360761 19361096 -180269054 + AluY SINE Alu 2 336 0 2421 88 3 3 chr5 19361578 19361886 -180268264 + AluSp SINE Alu 2 309 -4 2385 153 102 40 chr5 19362106 19362624 -180267526 + L1MC3 LINE L1 7218 7767 -18 1826 168 0 7 chr5 19362800 19363104 -180267046 - AluJo SINE Alu -10 302 1 261 312 73 46 chr5 19365509 19365727 -180264423 - L2 LINE L2 -4 3268 3045 206 206 0 0 chr5 19365912 19365946 -180264204 + (CA)n Simple_repeat Simple_repeat 2 35 0 1860 169 3 13 chr5 19367218 19367532 -180262618 + AluJo SINE Alu 1 311 -1 2278 103 0 17 chr5 19367818 19368120 -180262030 - AluSx SINE Alu -15 297 1 904 157 35 50 chr5 19368179 19368377 -180261773 + L1MB1 LINE L1 5942 6136 -32 210 71 0 0 chr5 19368824 19368852 -180261298 + (T)n Simple_repeat Simple_repeat 1 28 0 1582 251 75 19 chr5 19369209 19369687 -180260463 + MLT1D LTR MaLR 1 505 0 22 80 0 0 chr5 19371091 19371141 -180259009 + AT_rich Low_complexity Low_complexity 1 50 0 2277 107 0 0 chr5 19371758 19372056 -180258094 - AluSx SINE Alu -13 299 2 2533 75 3 0 chr5 19372447 19372754 -180257396 + AluSc SINE Alu 1 308 -1 2328 111 0 6 chr5 19373278 19373593 -180256557 - AluSq SINE Alu 0 313 1 208 134 15 149 chr5 19374202 19374269 -180255881 + MER5A DNA MER1_type 47 104 -85 237 204 20 0 chr5 19374291 19374340 -180255810 - L2 LINE L2 -7 3306 3257 393 296 75 0 chr5 19374684 19374843 -180255307 + MER112 DNA MER1_type 74 244 -16 814 225 86 72 chr5 19375633 19375828 -180254322 - L1MC5 LINE L1 -51 7910 7719 2305 93 0 43 chr5 19375828 19376016 -180254134 - AluSc SINE Alu 0 309 114 197 33 33 0 chr5 19376016 19376046 -180254104 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2359 60 14 0 chr5 19376046 19376328 -180253822 - AluSp SINE Alu -27 286 1 2305 93 0 43 chr5 19376328 19376461 -180253689 - AluSc SINE Alu -193 116 1 814 225 86 72 chr5 19376461 19376580 -180253570 - L1MC5 LINE L1 -242 7719 7603 213 39 0 0 chr5 19376580 19376606 -180253544 + (CA)n Simple_repeat Simple_repeat 1 26 0 814 225 86 72 chr5 19376606 19377189 -180252961 - L1MC5 LINE L1 -358 7603 6985 2261 127 30 25 chr5 19377189 19377550 -180252600 + THE1B LTR MaLR 1 363 -1 814 225 86 72 chr5 19377550 19377699 -180252451 - L1MC5 LINE L1 -976 6985 6840 484 236 139 6 chr5 19378112 19378277 -180251873 - L3 LINE CR1 -7 1570 1384 469 309 115 20 chr5 19378318 19378613 -180251537 - L2 LINE L2 -37 3235 2913 643 240 110 0 chr5 19378735 19378935 -180251215 - MIR SINE MIR -37 225 4 2827 143 22 0 chr5 19379055 19379509 -180250641 - L1MC2 LINE L1 -234 6110 5647 276 293 219 30 chr5 19379525 19379948 -180250202 - L3 LINE CR1 -608 969 423 1484 245 59 64 chr5 19380405 19380981 -180249169 - MER45C DNA AcHobo -378 575 3 400 18 35 0 chr5 19381068 19381125 -180249025 + (CA)n Simple_repeat Simple_repeat 2 60 0 180 0 0 0 chr5 19381382 19381402 -180248748 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 1087 40 0 0 chr5 19381403 19381527 -180248623 - L1PA10 LINE L1 -20 6148 6025 189 237 0 0 chr5 19381836 19381874 -180248276 - L3 LINE CR1 -615 962 925 23 33 0 0 chr5 19382192 19382222 -180247928 + AT_rich Low_complexity Low_complexity 1 30 0 1565 150 0 41 chr5 19382747 19383041 -180247109 + AluSx SINE Alu 3 284 -28 24 67 0 0 chr5 19383041 19383086 -180247064 + AT_rich Low_complexity Low_complexity 1 45 0 2533 76 15 6 chr5 19383502 19383843 -180246307 + L1PB1 LINE L1 5807 6150 -1 210 281 62 0 chr5 19383861 19383925 -180246225 - MIR3 SINE MIR -1 207 140 23 68 0 0 chr5 19383939 19383983 -180246167 + AT_rich Low_complexity Low_complexity 1 44 0 279 237 52 10 chr5 19384279 19384376 -180245774 - MER104 DNA Tc2 -45 135 35 2280 161 59 5 chr5 19385160 19385565 -180244585 - MSTA LTR MaLR -1 427 1 275 322 23 11 chr5 19386042 19386129 -180244021 + MER5A DNA MER1_type 56 143 -46 191 286 0 18 chr5 19386147 19386203 -180243947 + MIR3 SINE MIR 151 205 -3 2000 158 33 19 chr5 19386296 19386656 -180243494 - MLT1A1 LTR MaLR 0 365 1 1948 191 31 13 chr5 19387661 19388044 -180242106 - MLT1B LTR MaLR 0 390 1 1768 116 54 4 chr5 19388912 19389215 -180240935 - AluSx SINE Alu 0 312 1 257 257 27 27 chr5 19390214 19390288 -180239862 - MIR SINE MIR -112 150 77 602 202 6 0 chr5 19390328 19390506 -180239644 + (CA)n Simple_repeat Simple_repeat 2 180 0 5194 132 11 5 chr5 19391765 19392570 -180237580 + L1PA14 LINE L1 5311 6120 -41 374 266 32 24 chr5 19392854 19392978 -180237172 + L2 LINE L2 3136 3260 -12 1937 122 17 3 chr5 19393993 19394287 -180235863 + AluSx SINE Alu 5 302 -10 262 229 0 0 chr5 19395624 19395672 -180234478 + MIR3 SINE MIR 112 159 -49 448 280 70 42 chr5 19396656 19396905 -180233245 + MIR SINE MIR 3 256 -6 557 271 133 57 chr5 19397572 19397992 -180232158 + L2 LINE L2 2816 3267 -5 208 272 97 29 chr5 19398022 19398125 -180232025 + L2 LINE L2 2925 3034 -238 1309 174 15 104 chr5 19398443 19398770 -180231380 + AluJb SINE Alu 1 298 -4 231 291 181 16 chr5 19399134 19399261 -180230889 - L2 LINE L2 -1 3271 3124 1901 282 133 40 chr5 19399261 19399583 -180230567 + HAL1 LINE L1 16 307 -2200 1966 98 0 0 chr5 19399583 19399848 -180230302 - AluSx SINE Alu -47 265 1 1901 282 133 40 chr5 19399848 19400632 -180229518 + HAL1 LINE L1 307 1017 -1490 1346 185 86 20 chr5 19400632 19400924 -180229226 + AluJo SINE Alu 1 311 -1 1901 282 133 40 chr5 19400924 19400937 -180229213 + HAL1 LINE L1 1017 1027 -1480 2322 97 3 0 chr5 19400937 19401246 -180228904 - AluSx SINE Alu -2 310 1 1901 282 133 40 chr5 19401246 19401754 -180228396 + HAL1 LINE L1 1027 1797 -710 427 213 184 7 chr5 19402060 19402201 -180227949 + HAL1 LINE L1 2057 2222 -285 2059 94 3 3 chr5 19402276 19402585 -180227565 + AluSp SINE Alu 1 309 0 326 257 122 8 chr5 19403776 19403924 -180226226 + MIR SINE MIR 29 192 -62 1356 193 8 89 chr5 19405159 19405553 -180224597 - MLT1A1 LTR MaLR -3 362 1 1434 291 36 16 chr5 19406486 19406926 -180223224 + L2 LINE L2 2852 3300 -13 1777 118 0 11 chr5 19406956 19407218 -180222932 + AluSx SINE Alu 45 303 -9 1176 133 6 0 chr5 19407587 19407767 -180222383 - AluSx SINE Alu -131 181 1 1883 126 3 7 chr5 19408004 19408290 -180221860 + AluSx SINE Alu 1 285 -27 318 272 22 22 chr5 19408292 19408384 -180221766 - L1MC4 LINE L1 -1338 6704 6613 183 204 0 0 chr5 19408385 19408429 -180221721 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 23 33 0 0 chr5 19408865 19408895 -180221255 + AT_rich Low_complexity Low_complexity 1 30 0 2856 91 3 0 chr5 19409027 19409390 -180220760 + THE1B LTR MaLR 1 364 0 1967 124 0 3 chr5 19409977 19410267 -180219883 + AluSg SINE Alu 1 289 -21 790 144 50 29 chr5 19410272 19410411 -180219739 + FLAM_C SINE Alu 2 143 0 27 29 0 0 chr5 19410791 19410825 -180219325 + AT_rich Low_complexity Low_complexity 1 34 0 2382 67 0 0 chr5 19410959 19411257 -180218893 - AluY SINE Alu -13 298 1 2103 100 4 0 chr5 19411321 19411602 -180218548 - AluSp SINE Alu -31 282 1 22 0 0 0 chr5 19411892 19411914 -180218236 + AT_rich Low_complexity Low_complexity 1 22 0 8453 32 10 0 chr5 19412730 19414502 -180215648 + L1PA4 LINE L1 4367 6137 -18 183 267 67 33 chr5 19414504 19414594 -180215556 + L2 LINE L2 3046 3138 -175 2179 103 0 3 chr5 19414659 19414971 -180215179 - AluY SINE Alu 0 311 1 261 177 108 54 chr5 19415128 19415258 -180214892 + MLT1F LTR MaLR 189 325 -217 480 367 92 28 chr5 19415353 19415498 -180214652 + L2 LINE L2 2287 2421 -851 1626 179 68 70 chr5 19415498 19415864 -180214286 + MLT2D LTR ERVL 2 368 -46 402 21 0 0 chr5 19415864 19415911 -180214239 + (CA)n Simple_repeat Simple_repeat 1 47 0 1626 179 68 70 chr5 19415911 19415958 -180214192 + MLT2D LTR ERVL 368 414 0 480 367 92 28 chr5 19415958 19416723 -180213427 + L2 LINE L2 2421 3258 -14 1319 107 0 5 chr5 19416847 19417034 -180213116 + AluSx SINE Alu 1 186 -126 357 197 0 0 chr5 19417112 19417178 -180212972 + AluS SINE Alu 230 295 -7 982 311 119 35 chr5 19417451 19417579 -180212571 - L1MC4 LINE L1 -1 8041 7925 423 0 0 0 chr5 19417579 19417626 -180212524 + (CA)n Simple_repeat Simple_repeat 2 48 0 982 311 119 35 chr5 19417626 19417957 -180212193 - L1MC4 LINE L1 -117 7925 7623 1822 129 61 0 chr5 19417957 19418237 -180211913 + AluSx SINE Alu 1 297 -15 1869 140 3 3 chr5 19418237 19418536 -180211614 + AluSq SINE Alu 1 300 -13 982 311 119 35 chr5 19418536 19418936 -180211214 - L1MC4 LINE L1 -418 7624 7107 1384 158 0 0 chr5 19418941 19419156 -180210994 - AluJb SINE Alu -15 297 83 1021 242 125 45 chr5 19419173 19419622 -180210528 - L1MC4 LINE L1 -884 6924 6505 221 327 87 10 chr5 19420299 19420403 -180209747 - MIR SINE MIR -76 186 75 293 233 0 33 chr5 19420417 19420507 -180209643 - HsTC2 DNA Tc2 -1811 87 1 479 236 9 9 chr5 19421096 19421202 -180208948 + MER94 DNA DNA 9 114 -20 1790 194 23 127 chr5 19421942 19422549 -180207601 + MER21B LTR ERV1 1 544 -319 1531 184 4 0 chr5 19422552 19422830 -180207320 + AluJo SINE Alu 1 279 -33 525 131 0 0 chr5 19422830 19422914 -180207236 + (TG)n Simple_repeat Simple_repeat 2 85 0 913 257 75 12 chr5 19422926 19423179 -180206971 + MER21B LTR ERV1 538 806 -57 2348 183 16 56 chr5 19423200 19423249 -180206901 - LTR54 LTR ERV1 0 510 461 2427 60 0 10 chr5 19423249 19423563 -180206587 + AluY SINE Alu 1 311 0 2348 183 16 56 chr5 19423563 19424027 -180206123 - LTR54 LTR ERV1 -49 461 18 746 100 0 0 chr5 19424027 19424127 -180206023 + HY1 scRNA scRNA 1 100 -12 1498 129 121 4 chr5 19424160 19424424 -180205726 - AluJb SINE Alu -17 295 1 275 331 106 7 chr5 19425229 19425371 -180204779 + L2 LINE L2 2264 2419 -895 191 242 0 65 chr5 19426256 19426318 -180203832 - L2 LINE L2 -7 3265 3208 2120 116 73 14 chr5 19426576 19426930 -180203220 - THE1C LTR MaLR 0 375 1 290 227 19 63 chr5 19428721 19428854 -180201296 - L1ME3A LINE L1 -4 6166 6038 385 183 14 35 chr5 19429327 19429469 -180200681 + GA-rich Low_complexity Low_complexity 1 139 0 21 0 0 0 chr5 19429937 19429958 -180200192 + GC_rich Low_complexity Low_complexity 1 21 0 243 250 11 22 chr5 19430055 19430147 -180200003 + C-rich Low_complexity Low_complexity 5 95 0 26 0 0 0 chr5 19430340 19430366 -180199784 + GC_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 19430531 19430552 -180199598 + GC_rich Low_complexity Low_complexity 1 21 0 2641 48 0 10 chr5 19431708 19432021 -180198129 - AluY SINE Alu -1 310 1 25 51 0 0 chr5 19432026 19432065 -180198085 + AT_rich Low_complexity Low_complexity 1 39 0 1384 249 63 34 chr5 19432297 19432856 -180197294 - L1MC4a LINE L1 -1980 5828 5254 402 257 88 41 chr5 19434053 19434224 -180195926 + L1ME4a LINE L1 5743 5921 -249 29 0 0 0 chr5 19434598 19434627 -180195523 + AT_rich Low_complexity Low_complexity 1 29 0 1193 245 57 49 chr5 19434829 19435059 -180195091 - L1ME2 LINE L1 -29 6135 5908 2051 98 0 0 chr5 19435059 19435323 -180194827 - AluSx SINE Alu -14 298 35 1193 245 57 49 chr5 19435323 19435562 -180194588 - L1ME2 LINE L1 -256 5908 5662 7246 44 0 5 chr5 19435731 19436689 -180193461 - L1PA5 LINE L1 -2 6152 5185 629 206 50 22 chr5 19437048 19437228 -180192922 + MER5A DNA MER1_type 4 188 -1 290 240 60 30 chr5 19437826 19437926 -180192224 - MIR SINE MIR -56 206 104 573 260 105 0 chr5 19437950 19438131 -180192019 + MER3 DNA MER1_type 1 200 -9 1993 126 20 3 chr5 19438958 19439260 -180190890 + AluSx SINE Alu 1 307 -5 219 36 0 0 chr5 19439266 19439294 -180190856 + (GGGGA)n Simple_repeat Simple_repeat 4 31 0 210 247 0 0 chr5 19439340 19439417 -180190733 + A-rich Low_complexity Low_complexity 1 77 0 308 295 105 19 chr5 19439443 19439653 -180190497 + L1M4 LINE L1 3073 3300 -2846 230 143 20 0 chr5 19439667 19439716 -180190434 + GA-rich Low_complexity Low_complexity 3 52 0 264 217 62 108 chr5 19441061 19441105 -180189045 + L2 LINE L2 3190 3234 -79 1731 138 24 3 chr5 19441105 19441394 -180188756 - AluSx SINE Alu -16 296 2 264 217 62 108 chr5 19441394 19441478 -180188672 + L2 LINE L2 3234 3312 -1 270 255 54 34 chr5 19441506 19441655 -180188495 + L1ME4a LINE L1 5968 6119 -2 21532 45 12 5 chr5 19442147 19444824 -180185326 + L1P LINE L1 687 3384 -2762 1038 198 40 12 chr5 19444824 19445072 -180185078 - MER39 LTR ERV1 -60 647 393 3361 52 7 5 chr5 19445105 19445527 -180184623 + L1PA4 LINE L1 5715 6137 -18 2351 93 0 3 chr5 19445690 19446002 -180184148 - AluY SINE Alu 0 311 1 249 177 108 54 chr5 19446159 19446289 -180183861 + MLT1F LTR MaLR 189 325 -217 277 362 91 26 chr5 19446384 19446529 -180183621 + L2 LINE L2 2287 2421 -893 1624 181 68 70 chr5 19446529 19446895 -180183255 + MLT2D LTR ERVL 2 368 -46 315 0 0 0 chr5 19446895 19446930 -180183220 + (CA)n Simple_repeat Simple_repeat 1 35 0 1624 181 68 70 chr5 19446930 19446977 -180183173 + MLT2D LTR ERVL 368 414 0 277 362 91 26 chr5 19446977 19447472 -180182678 + L2 LINE L2 2421 2968 -346 183 319 28 14 chr5 19447670 19447742 -180182408 + L2 LINE L2 3186 3258 -14 2209 124 0 0 chr5 19447866 19448165 -180181985 + AluSx SINE Alu 1 299 -13 1796 296 124 40 chr5 19448437 19448569 -180181581 - L1MC4 LINE L1 0 8042 7923 477 0 0 0 chr5 19448569 19448622 -180181528 + (CA)n Simple_repeat Simple_repeat 2 54 0 1796 296 124 40 chr5 19448622 19448953 -180181197 - L1MC4 LINE L1 -119 7923 7621 1906 134 60 0 chr5 19448953 19449236 -180180914 + AluSx SINE Alu 1 300 -12 2035 139 0 3 chr5 19449236 19449536 -180180614 + AluSq SINE Alu 1 300 -13 1796 296 124 40 chr5 19449536 19449941 -180180209 - L1MC4 LINE L1 -421 7621 7252 1479 157 0 0 chr5 19449941 19450157 -180179993 - AluJb SINE Alu -14 298 83 1796 296 124 40 chr5 19450157 19450517 -180179633 - L1MC4 LINE L1 -790 7252 6707 303 233 0 33 chr5 19451415 19451505 -180178645 - HsTC2 DNA Tc2 -1811 87 1 477 236 9 9 chr5 19452094 19452200 -180177950 + MER94 DNA DNA 9 114 -20 1777 194 23 127 chr5 19452939 19453546 -180176604 + MER21B LTR ERV1 1 544 -319 1635 184 4 0 chr5 19453549 19453827 -180176323 + AluJo SINE Alu 1 279 -33 750 154 0 0 chr5 19453827 19453957 -180176193 + (TG)n Simple_repeat Simple_repeat 2 131 0 558 285 29 7 chr5 19453969 19454106 -180176044 + MER21B LTR ERV1 538 677 -186 2234 112 0 0 chr5 19454407 19454702 -180175448 - AluSx SINE Alu -16 296 2 2525 75 3 0 chr5 19455093 19455399 -180174751 + AluSc SINE Alu 1 307 -2 2364 105 0 6 chr5 19455924 19456237 -180173913 - AluSq SINE Alu -2 311 1 186 329 25 51 chr5 19456311 19456469 -180173681 - L2 LINE L2 -310 2962 2809 208 134 15 149 chr5 19456847 19456914 -180173236 + MER5A DNA MER1_type 47 104 -85 237 204 20 0 chr5 19456936 19456985 -180173165 - L2 LINE L2 -7 3306 3257 393 296 75 0 chr5 19457329 19457488 -180172662 + MER112 DNA MER1_type 74 244 -16 586 205 105 53 chr5 19458278 19458468 -180171682 - L1MC5 LINE L1 -51 7910 7711 2324 93 27 0 chr5 19458473 19458774 -180171376 - AluSc SINE Alu 0 309 1 936 202 62 5 chr5 19459080 19459288 -180170862 - MER58A DNA MER1_type -3 221 2 301 253 163 11 chr5 19460300 19460490 -180169660 + L2 LINE L2 2978 3196 -117 2349 109 0 0 chr5 19461283 19461585 -180168565 + AluSx SINE Alu 1 302 -10 2438 80 0 3 chr5 19463462 19463763 -180166387 + AluSq SINE Alu 1 300 -13 24 0 0 0 chr5 19463840 19463864 -180166286 + AT_rich Low_complexity Low_complexity 1 24 0 2012 164 0 0 chr5 19464732 19465036 -180165114 + AluSx SINE Alu 1 304 -8 2113 117 0 3 chr5 19465711 19466001 -180164149 + AluSg SINE Alu 1 289 -21 806 142 58 0 chr5 19466005 19466125 -180164025 + FLAM_C SINE Alu 1 127 -16 27 29 0 0 chr5 19466525 19466559 -180163591 + AT_rich Low_complexity Low_complexity 1 34 0 2513 67 0 0 chr5 19466693 19466991 -180163159 - AluY SINE Alu -13 298 1 1053 81 6 43 chr5 19467042 19467203 -180162947 - AluSq SINE Alu -19 294 140 227 127 0 73 chr5 19467327 19467382 -180162768 - Alu SINE Alu -248 52 2 402 257 88 41 chr5 19468115 19468286 -180161864 + L1ME3A LINE L1 5743 5921 -249 29 0 0 0 chr5 19468661 19468690 -180161460 + AT_rich Low_complexity Low_complexity 1 29 0 1193 245 57 49 chr5 19468892 19469122 -180161028 - L1ME2 LINE L1 -29 6135 5908 2059 98 0 0 chr5 19469122 19469387 -180160763 - AluSx SINE Alu -13 299 35 1193 245 57 49 chr5 19469387 19469626 -180160524 - L1ME2 LINE L1 -256 5908 5662 3219 52 24 9 chr5 19469794 19470216 -180159934 - L1PA5 LINE L1 -2 6152 5725 271 181 23 98 chr5 19470426 19470559 -180159591 + MER39 LTR ERV1 525 647 -60 27237 50 9 5 chr5 19470559 19473928 -180156222 - L1P LINE L1 -2762 3384 1 1817 167 24 3 chr5 19473982 19474275 -180155875 + AluJo SINE Alu 1 299 -13 322 298 181 23 chr5 19474664 19474963 -180155187 - L2 LINE L2 -1 3312 2967 2298 103 0 3 chr5 19474974 19475274 -180154876 - AluSx SINE Alu -13 299 1 7539 32 36 0 chr5 19475976 19477416 -180152734 - L1PA4 LINE L1 0 6155 4695 1052 140 59 16 chr5 19479076 19479262 -180150888 - AluSq SINE Alu 0 313 120 569 100 100 10 chr5 19479702 19479802 -180150348 - AluSq SINE Alu -170 143 35 2183 112 0 7 chr5 19480833 19481128 -180149022 + AluSg SINE Alu 2 294 -16 1522 185 82 4 chr5 19481731 19482012 -180148138 + AluJo SINE Alu 1 303 -9 702 248 82 19 chr5 19483982 19484188 -180145962 + MER20 DNA MER1_type 1 219 0 1874 107 11 0 chr5 19484629 19484901 -180145249 - L1PB1 LINE L1 -80 6071 5797 374 246 109 0 chr5 19485399 19485537 -180144613 + MIR SINE MIR 15 167 -95 1616 184 46 23 chr5 19486332 19486680 -180143470 - MLT1A1 LTR MaLR 0 365 10 2295 117 0 0 chr5 19486684 19486993 -180143157 + AluSx SINE Alu 1 309 -3 596 263 70 47 chr5 19487006 19487307 -180142843 + L1MC5 LINE L1 7610 7917 -44 1701 135 4 11 chr5 19487547 19487813 -180142337 + AluJb SINE Alu 17 280 -32 2340 98 0 0 chr5 19489598 19489894 -180140256 + AluSx SINE Alu 1 296 -16 24 67 0 0 chr5 19490689 19490734 -180139416 + AT_rich Low_complexity Low_complexity 1 45 0 2398 91 0 0 chr5 19491123 19491421 -180138729 + AluSg SINE Alu 2 299 -11 328 261 17 9 chr5 19491842 19491957 -180138193 + A-rich Low_complexity Low_complexity 1 116 0 2231 107 7 0 chr5 19491966 19492256 -180137894 + AluSg SINE Alu 1 292 -18 22 0 0 0 chr5 19492611 19492633 -180137517 + AT_rich Low_complexity Low_complexity 1 22 0 1660 173 37 0 chr5 19492635 19492948 -180137202 + AluJo SINE Alu 1 323 0 2515 57 0 0 chr5 19493170 19493469 -180136681 - AluY SINE Alu -12 299 1 215 188 0 14 chr5 19493557 19493626 -180136524 + GA-rich Low_complexity Low_complexity 1 68 0 909 139 0 0 chr5 19494217 19494361 -180135789 + AluSg/x SINE Alu 167 310 -2 1987 149 3 0 chr5 19494941 19495250 -180134900 + AluSx SINE Alu 1 310 -2 1891 211 21 0 chr5 19496476 19496855 -180133295 + MLT1B LTR MaLR 3 389 -1 256 147 29 44 chr5 19497474 19497542 -180132608 + CT-rich Low_complexity Low_complexity 3 69 0 2408 86 0 16 chr5 19498144 19498457 -180131693 + AluSc SINE Alu 1 308 -1 1598 155 45 38 chr5 19498593 19498884 -180131266 + AluJb SINE Alu 1 293 -19 505 228 181 9 chr5 19499377 19499609 -180130541 - MER5C DNA MER1_type -45 279 8 21 71 0 0 chr5 19500401 19500443 -180129707 + AT_rich Low_complexity Low_complexity 1 42 0 2107 105 3 7 chr5 19500448 19500734 -180129416 + AluSx SINE Alu 1 285 -27 465 235 0 0 chr5 19500741 19500873 -180129277 + (CATATA)n Simple_repeat Simple_repeat 2 133 0 23 33 0 0 chr5 19501309 19501339 -180128811 + AT_rich Low_complexity Low_complexity 1 30 0 2853 91 3 0 chr5 19501471 19501834 -180128316 + THE1B LTR MaLR 1 364 0 1917 168 0 3 chr5 19503114 19503412 -180126738 - AluJo SINE Alu -15 297 1 1416 257 150 2 chr5 19503844 19504358 -180125792 + MLT1E LTR MaLR 1 590 -3 43672 44 11 5 chr5 19506161 19511972 -180118178 - L1PA4 LINE L1 -311 5844 1 865 299 165 24 chr5 19511974 19512289 -180117861 - L2 LINE L2 -278 3035 2766 1908 152 10 3 chr5 19512289 19512592 -180117558 - AluSx SINE Alu -7 305 1 865 299 165 24 chr5 19512592 19512959 -180117191 - L2 LINE L2 -547 2766 2259 503 283 279 24 chr5 19512996 19513274 -180116876 - L2 LINE L2 -1841 1473 1267 2127 164 126 42 chr5 19513274 19513751 -180116399 - MLT2B1 LTR ERVL -1 519 3 503 283 279 24 chr5 19513751 19514001 -180116149 - L2 LINE L2 -2047 1267 1082 2452 88 7 0 chr5 19514001 19514309 -180115841 + AluY SINE Alu 1 310 -1 503 283 279 24 chr5 19514309 19514765 -180115385 - L2 LINE L2 -2232 1082 237 1046 299 46 19 chr5 19515139 19515664 -180114486 - HERV16 LTR ERVL -2490 2524 2006 770 266 46 14 chr5 19515772 19515990 -180114160 - HERV16 LTR ERVL -3165 1831 1607 764 267 73 54 chr5 19516230 19516601 -180113549 + MLT1J1 LTR MaLR 69 446 0 2120 105 14 14 chr5 19516660 19516955 -180113195 - AluSc SINE Alu -13 296 2 1778 131 134 7 chr5 19517098 19517403 -180112747 - MER2 DNA MER2_type 0 344 1 973 203 85 42 chr5 19517706 19518046 -180112104 - MLT1D LTR MaLR 0 505 111 2096 120 14 0 chr5 19518046 19518330 -180111820 - AluSg SINE Alu -22 288 1 973 203 85 42 chr5 19518330 19518441 -180111709 - MLT1D LTR MaLR -394 111 6 3517 42 16 5 chr5 19518474 19518907 -180111243 - L1PA4 LINE L1 -3 6152 5715 1047 192 49 8 chr5 19518940 19519185 -180110965 + MER39 LTR ERV1 393 647 -60 27395 48 9 5 chr5 19519185 19522554 -180107596 - L1P LINE L1 -2762 3384 1 1737 170 38 3 chr5 19522608 19522897 -180107253 + AluJo SINE Alu 1 299 -13 311 313 180 27 chr5 19523286 19523586 -180106564 - L2 LINE L2 -1 3312 2967 2243 108 0 3 chr5 19523597 19523894 -180106256 - AluSx SINE Alu -16 296 1 356 286 93 54 chr5 19524435 19524596 -180105554 - L1M4 LINE L1 -1727 4419 4241 21296 29 9 3 chr5 19524596 19527920 -180102230 - L1PA4 LINE L1 0 6155 2822 356 286 93 54 chr5 19527920 19528038 -180102112 - L1M4 LINE L1 -1905 4241 4129 789 254 24 52 chr5 19528195 19528443 -180101707 - MLT1F1 LTR MaLR -326 241 1 289 262 69 55 chr5 19528455 19528600 -180101550 - MLT1G1-int LTR MaLR -15 1720 1574 2210 128 0 0 chr5 19529141 19529439 -180100711 + AluSx SINE Alu 1 298 -14 591 330 42 13 chr5 19529671 19530114 -180100036 - MLT1G1-int LTR MaLR -795 576 2 881 273 130 55 chr5 19530117 19530628 -180099522 - MLT1G1 LTR MaLR -3 592 1 426 150 59 124 chr5 19530628 19530772 -180099378 - MLT1J LTR MaLR -377 134 1 1900 176 94 8 chr5 19531060 19531452 -180098698 - MSTB LTR MaLR 0 426 1 1472 287 67 25 chr5 19531527 19531982 -180098168 + MLT1H LTR MaLR 9 490 -59 2075 106 23 3 chr5 19531982 19532283 -180097867 + AluSq SINE Alu 1 307 -6 1472 287 67 25 chr5 19532283 19532346 -180097804 + MLT1H LTR MaLR 490 549 0 847 194 4 106 chr5 19533323 19533550 -180096600 - MER63A DNA MER1_type 0 210 7 1798 105 49 0 chr5 19533786 19534052 -180096098 + AluSg SINE Alu 1 279 -31 284 318 73 73 chr5 19534094 19534286 -180095864 - L2 LINE L2 -524 2790 2599 924 269 23 0 chr5 19534959 19535178 -180094972 - MER58A DNA MER1_type 0 224 1 1855 168 7 0 chr5 19535509 19535819 -180094331 - AluJo SINE Alu 0 312 1 2459 122 11 6 chr5 19535848 19536210 -180093940 + THE1B LTR MaLR 1 364 0 811 205 13 0 chr5 19536743 19536894 -180093256 + AluJb SINE Alu 140 292 -20 1071 164 19 56 chr5 19536912 19537125 -180093025 - MER2 DNA MER2_type -140 205 1 562 297 29 24 chr5 19537158 19537367 -180092783 + L1MD2 LINE L1 6140 6349 -10 1969 106 57 0 chr5 19538118 19538401 -180091749 + AluSg SINE Alu 1 299 -11 2105 86 38 0 chr5 19542391 19542682 -180087468 - AluY SINE Alu -9 302 1 933 202 62 5 chr5 19542988 19543196 -180086954 - MER58A DNA MER1_type -3 221 2 379 253 163 11 chr5 19544208 19544398 -180085752 + L2 LINE L2 2978 3196 -117 2228 109 0 0 chr5 19545191 19545494 -180084656 + AluSx SINE Alu 1 303 -9 2307 80 0 3 chr5 19547371 19547672 -180082478 + AluSq SINE Alu 1 300 -13 23 0 0 0 chr5 19547749 19547772 -180082378 + AT_rich Low_complexity Low_complexity 1 23 0 1894 164 0 0 chr5 19548640 19548944 -180081206 + AluSx SINE Alu 1 304 -8 1991 117 0 3 chr5 19549619 19549909 -180080241 + AluSg SINE Alu 1 289 -21 790 144 50 29 chr5 19549914 19550053 -180080097 + FLAM_C SINE Alu 2 143 0 27 29 0 0 chr5 19550433 19550467 -180079683 + AT_rich Low_complexity Low_complexity 1 34 0 2382 67 0 0 chr5 19550601 19550899 -180079251 - AluY SINE Alu -13 298 1 2132 105 0 3 chr5 19550950 19551245 -180078905 - AluSq SINE Alu -19 294 1 2053 108 3 23 chr5 19551482 19551788 -180078362 + AluSx SINE Alu 1 300 -12 2063 124 3 0 chr5 19552709 19553007 -180077143 - AluSx SINE Alu -13 299 1 258 344 56 16 chr5 19553381 19553506 -180076644 - L2 LINE L2 -2 3270 3141 1130 172 23 18 chr5 19553975 19554196 -180075954 + AluJb SINE Alu 81 302 -10 22 0 0 0 chr5 19555973 19555995 -180074155 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 19557365 19557400 -180072750 + AT_rich Low_complexity Low_complexity 1 35 0 1670 154 20 10 chr5 19557435 19557728 -180072422 - AluSp SINE Alu -17 296 1 1892 125 17 3 chr5 19557952 19558248 -180071902 + AluSx SINE Alu 1 300 -12 1613 166 38 3 chr5 19558402 19558692 -180071458 - AluJo SINE Alu -8 304 5 1393 118 77 14 chr5 19559463 19559684 -180070466 + MER46A DNA MER2_type 2 236 0 1997 101 38 3 chr5 19559724 19560011 -180070139 - AluSq SINE Alu -16 297 1 1734 165 4 0 chr5 19560226 19560538 -180069612 + AluJo SINE Alu 3 315 0 2152 99 3 0 chr5 19561656 19561949 -180068201 + AluSp SINE Alu 14 307 -6 371 259 21 77 chr5 19562296 19562439 -180067711 + MIR SINE MIR 96 230 -32 977 199 108 111 chr5 19563226 19563567 -180066583 - MER2 DNA MER2_type 0 345 6 2350 67 0 3 chr5 19564172 19564470 -180065680 + AluY SINE Alu 1 297 -14 2212 100 0 0 chr5 19564601 19564900 -180065250 + AluSx SINE Alu 1 299 -13 866 243 69 107 chr5 19564915 19565323 -180064827 + L1MC5 LINE L1 7222 7593 -368 2238 104 3 0 chr5 19565323 19565631 -180064519 + AluSx SINE Alu 1 309 -3 866 243 69 107 chr5 19565631 19565945 -180064205 + L1MC5 LINE L1 7593 7917 -44 1596 135 4 11 chr5 19566185 19566451 -180063699 + AluJb SINE Alu 17 280 -32 2211 98 0 0 chr5 19568236 19568532 -180061618 + AluSx SINE Alu 1 296 -16 24 67 0 0 chr5 19569327 19569372 -180060778 + AT_rich Low_complexity Low_complexity 1 45 0 2269 91 0 0 chr5 19569761 19570059 -180060091 + AluSg SINE Alu 2 299 -11 328 261 17 9 chr5 19570480 19570595 -180059555 + A-rich Low_complexity Low_complexity 1 116 0 2106 107 7 0 chr5 19570604 19570894 -180059256 + AluSg SINE Alu 1 292 -18 22 0 0 0 chr5 19571249 19571271 -180058879 + AT_rich Low_complexity Low_complexity 1 22 0 1548 173 37 0 chr5 19571273 19571586 -180058564 + AluJo SINE Alu 1 323 0 2384 57 0 0 chr5 19571808 19572107 -180058043 - AluY SINE Alu -12 299 1 215 188 0 14 chr5 19572195 19572264 -180057886 + GA-rich Low_complexity Low_complexity 1 68 0 861 139 0 0 chr5 19572855 19572999 -180057151 + AluSg/x SINE Alu 165 308 -2 1874 149 3 0 chr5 19573579 19573888 -180056262 + AluSx SINE Alu 1 310 -2 1901 211 21 0 chr5 19575113 19575492 -180054658 + MLT1B LTR MaLR 3 389 -1 256 147 29 44 chr5 19576111 19576179 -180053971 + CT-rich Low_complexity Low_complexity 3 69 0 2277 86 0 16 chr5 19576781 19577094 -180053056 + AluSc SINE Alu 1 308 -1 1483 155 45 38 chr5 19577229 19577520 -180052630 + AluJb SINE Alu 1 293 -19 625 246 177 0 chr5 19578013 19578245 -180051905 - MER5C DNA MER1_type -44 280 8 21 71 0 0 chr5 19579037 19579079 -180051071 + AT_rich Low_complexity Low_complexity 1 42 0 1984 105 3 7 chr5 19579084 19579370 -180050780 + AluSx SINE Alu 1 285 -27 318 272 22 22 chr5 19579372 19579464 -180050686 - L1MC4 LINE L1 -1338 6704 6613 183 204 0 0 chr5 19579465 19579509 -180050641 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 23 33 0 0 chr5 19579945 19579975 -180050175 + AT_rich Low_complexity Low_complexity 1 30 0 2856 91 3 0 chr5 19580107 19580470 -180049680 + THE1B LTR MaLR 1 364 0 1917 168 0 3 chr5 19581749 19582047 -180048103 - AluJo SINE Alu -15 297 1 206 263 88 95 chr5 19582333 19582470 -180047680 - L2 LINE L2 -188 3084 2949 1416 257 150 2 chr5 19582479 19582993 -180047157 + MLT1E LTR MaLR 1 590 -3 421 250 154 54 chr5 19584555 19584685 -180045465 - L1MC5 LINE L1 -61 7900 7784 2311 64 51 0 chr5 19584685 19584980 -180045170 + AluSg SINE Alu 1 310 0 421 250 154 54 chr5 19584980 19585129 -180045021 - L1MC5 LINE L1 -177 7784 7593 204 40 0 0 chr5 19585291 19585316 -180044834 + (TGGGGG)n Simple_repeat Simple_repeat 5 29 0 226 250 0 0 chr5 19587178 19587230 -180042920 - L2 LINE L2 -1 3312 3261 1678 58 0 19 chr5 19587790 19587997 -180042153 + AluY SINE Alu 70 272 -39 1553 132 48 0 chr5 19588025 19588275 -180041875 + L1MA2 LINE L1 6014 6275 -29 30 0 0 0 chr5 19588277 19588307 -180041843 + AT_rich Low_complexity Low_complexity 1 30 0 430 216 0 0 chr5 19588502 19588576 -180041574 + Tigger3(Golem) DNA MER2_type 2 75 -2954 243 0 0 0 chr5 19588576 19588603 -180041547 + (T)n Simple_repeat Simple_repeat 1 27 0 917 128 8 8 chr5 19588616 19588749 -180041401 - AluSp SINE Alu -143 170 38 668 214 0 13 chr5 19588771 19588925 -180041225 + L1MB8 LINE L1 6027 6178 0 2358 101 0 0 chr5 19588943 19589239 -180040911 + AluSx SINE Alu 1 296 -16 2701 26 3 0 chr5 19589688 19589990 -180040160 + AluY SINE Alu 1 303 -8 189 346 0 0 chr5 19590255 19590307 -180039843 - MIR SINE MIR -65 143 92 2094 126 3 17 chr5 19590315 19590617 -180039533 - AluSx SINE Alu -14 298 1 6299 157 67 36 chr5 19591248 19592489 -180037661 + pTR5 LTR ERV1 741 2019 -419 370 214 31 20 chr5 19592489 19592587 -180037563 + LTR30 LTR ERV1 544 642 -80 1497 108 5 9 chr5 19592589 19592812 -180037338 + pTR5 LTR ERV1 171 392 -2046 2263 115 0 0 chr5 19593163 19593458 -180036692 + AluSp SINE Alu 1 295 -18 441 95 0 0 chr5 19593458 19593521 -180036629 + (TG)n Simple_repeat Simple_repeat 2 64 0 2182 90 0 17 chr5 19593902 19594241 -180035909 - AluY SINE Alu 0 334 1 4398 207 120 15 chr5 19596017 19596578 -180033572 + L1MD3 LINE L1 4832 4533 -1613 2460 58 0 39 chr5 19596578 19596889 -180033261 + AluY SINE Alu 1 299 -12 4398 207 120 15 chr5 19596889 19597851 -180032299 + L1MD3 LINE L1 4532 5392 -754 213 116 23 47 chr5 19598252 19598295 -180031855 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 2263 114 0 28 chr5 19598559 19598876 -180031274 - AluSg SINE Alu -2 308 1 220 288 55 0 chr5 19598943 19599016 -180031134 - MIR SINE MIR -29 233 157 2245 104 10 3 chr5 19599270 19599568 -180030582 - AluSx SINE Alu -12 300 1 227 356 0 0 chr5 19599764 19599854 -180030296 + (TAG)n Simple_repeat Simple_repeat 1 90 0 608 271 33 28 chr5 19599874 19600088 -180030062 - MIR SINE MIR -44 218 4 613 210 118 0 chr5 19600298 19600417 -180029733 + MER58A DNA MER1_type 4 136 0 284 170 57 0 chr5 19600417 19600464 -180029686 + MER58A DNA MER1_type 174 223 -1 1072 178 50 31 chr5 19600503 19600761 -180029389 + MER33 DNA MER1_type 61 323 -1 195 222 48 29 chr5 19602146 19602215 -180027935 - MIR SINE MIR -86 122 78 283 271 0 0 chr5 19602302 19602372 -180027778 + MER5C DNA MER1_type 53 122 -202 258 30 0 0 chr5 19602469 19602502 -180027648 - LTR12 LTR ERV1 -397 317 285 233 267 100 0 chr5 19602502 19602592 -180027558 + MER5C DNA MER1_type 226 324 0 2493 61 24 0 chr5 19602929 19603226 -180026924 - AluY SINE Alu -7 304 1 312 206 0 29 chr5 19603600 19603668 -180026482 + MLT1L LTR MaLR 332 397 -218 2350 92 0 0 chr5 19604527 19604821 -180025329 - AluSg1 SINE Alu -11 298 5 180 0 0 0 chr5 19604822 19604842 -180025308 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2029 118 0 21 chr5 19604842 19605131 -180025019 - AluSx SINE Alu -29 283 1 225 211 74 53 chr5 19605318 19605413 -180024737 + L1ME3A LINE L1 6074 6170 0 249 163 0 0 chr5 19605703 19605752 -180024398 + GA-rich Low_complexity Low_complexity 3 51 0 2311 112 0 0 chr5 19606334 19606637 -180023513 + AluSx SINE Alu 1 303 -9 235 268 28 14 chr5 19606750 19606821 -180023329 - MIR3 SINE MIR -23 185 114 2409 91 0 0 chr5 19608005 19608302 -180021848 + AluSq SINE Alu 1 297 -16 1522 185 82 4 chr5 19608905 19609186 -180020964 + AluJo SINE Alu 1 303 -9 702 248 82 19 chr5 19611156 19611362 -180018788 + MER20 DNA MER1_type 1 219 0 2228 123 0 0 chr5 19612093 19612394 -180017756 + AluSg SINE Alu 1 301 -9 258 170 0 21 chr5 19612400 19612447 -180017703 - L1ME LINE L1 -544 5577 5532 876 192 48 0 chr5 19612523 19612690 -180017460 + FAM SINE Alu 1 175 0 280 222 67 44 chr5 19612947 19613037 -180017113 + L1ME LINE L1 5568 5659 -462 21 0 0 0 chr5 19615614 19615635 -180014515 + AT_rich Low_complexity Low_complexity 1 21 0 1962 117 36 7 chr5 19616026 19616307 -180013843 + AluSx SINE Alu 7 295 -17 2017 144 3 0 chr5 19616321 19616612 -180013538 + AluSp SINE Alu 1 292 -21 2200 131 0 0 chr5 19616843 19617140 -180013010 + AluSx SINE Alu 1 297 -15 899 207 78 12 chr5 19617259 19617515 -180012635 + L1MC2 LINE L1 6072 6344 0 214 276 26 0 chr5 19618461 19618537 -180011613 + L3 LINE CR1 1306 1383 -194 2330 84 7 7 chr5 19618540 19618839 -180011311 + AluSq SINE Alu 1 299 -14 1826 156 3 34 chr5 19618886 19619207 -180010943 + AluJo SINE Alu 1 311 -1 4330 80 5 0 chr5 19619395 19619946 -180010204 - MER41A LTR ERV1 0 554 1 530 314 135 4 chr5 19619976 19620228 -180009922 + HsTC2 DNA Tc2 127 411 -1487 291 284 46 0 chr5 19620232 19620341 -180009809 + HsTC2 DNA Tc2 1785 1898 0 249 200 0 43 chr5 19621106 19621119 -180009031 + GA-rich Low_complexity Low_complexity 3 15 -54 2484 74 0 3 chr5 19621119 19621429 -180008721 + AluY SINE Alu 1 309 -2 249 200 0 43 chr5 19621429 19621485 -180008665 + GA-rich Low_complexity Low_complexity 15 69 0 961 189 6 0 chr5 19621549 19621718 -180008432 - AluJb SINE Alu -8 304 135 1999 122 6 47 chr5 19621719 19622038 -180008112 - AluSx SINE Alu -6 306 1 226 159 0 23 chr5 19622044 19622088 -180008062 + GA-rich Low_complexity Low_complexity 1 43 0 309 51 0 0 chr5 19622088 19622127 -180008023 + (GGGA)n Simple_repeat Simple_repeat 3 41 0 2111 105 7 0 chr5 19622715 19622991 -180007159 + AluSx SINE Alu 29 306 -6 22 0 0 0 chr5 19623884 19623906 -180006244 + AT_rich Low_complexity Low_complexity 1 22 0 2233 100 4 0 chr5 19624196 19624501 -180005649 + AluSp SINE Alu 1 306 0 1928 115 49 18 chr5 19624963 19625249 -180004901 - AluSg SINE Alu -11 299 5 369 223 87 10 chr5 19625643 19625746 -180004404 - MER104 DNA Tc2 -12 168 58 2163 119 0 16 chr5 19625758 19626068 -180004082 - AluSx SINE Alu -7 305 1 2264 92 6 16 chr5 19626635 19626949 -180003201 - AluY SINE Alu 0 311 1 2309 105 3 0 chr5 19626949 19627253 -180002897 - AluSx SINE Alu -7 305 1 196 82 31 72 chr5 19627469 19627566 -180002584 + (TTAAA)n Simple_repeat Simple_repeat 3 95 0 212 258 0 0 chr5 19627903 19627965 -180002185 + A-rich Low_complexity Low_complexity 1 62 0 2353 60 0 0 chr5 19628643 19628947 -180001203 - AluY SINE Alu 0 304 1 818 213 94 109 chr5 19629213 19629550 -180000600 - L1MC5 LINE L1 -30 7931 7602 1774 171 30 7 chr5 19629550 19629848 -180000302 - AluJo SINE Alu -7 305 1 818 213 94 109 chr5 19629848 19629998 -180000152 - L1MC5 LINE L1 -359 7602 7451 1901 149 0 56 chr5 19630305 19630626 -179999524 + AluJb SINE Alu 5 307 -5 991 176 0 0 chr5 19630626 19630771 -179999379 + AluJb SINE Alu 137 284 -28 426 20 0 0 chr5 19630771 19630822 -179999328 + (CA)n Simple_repeat Simple_repeat 1 51 0 991 176 0 0 chr5 19630822 19630835 -179999315 + AluJb SINE Alu 283 295 -17 1891 157 0 20 chr5 19631131 19631431 -179998719 - AluJb SINE Alu -6 306 13 274 321 37 8 chr5 19631961 19632095 -179998055 + MIR SINE MIR 70 207 -55 539 268 42 19 chr5 19632124 19632344 -179997806 + MIR SINE MIR 37 262 0 2413 75 3 3 chr5 19632407 19632702 -179997448 - AluSq SINE Alu -18 295 1 2351 85 0 31 chr5 19633651 19633969 -179996181 + AluY SINE Alu 2 309 -2 304 256 40 72 chr5 19634267 19634392 -179995758 + MIR SINE MIR 48 168 -94 2197 116 0 0 chr5 19634457 19634771 -179995379 - AluSq SINE Alu 0 314 1 1479 169 23 49 chr5 19635129 19635437 -179994713 - AluJo SINE Alu -12 300 1 243 0 0 0 chr5 19635596 19635623 -179994527 + (A)n Simple_repeat Simple_repeat 1 27 0 2131 129 7 16 chr5 19636157 19636466 -179993684 + AluSx SINE Alu 1 306 -6 2077 124 3 10 chr5 19637345 19637644 -179992506 + AluSx SINE Alu 6 302 -10 2422 95 0 0 chr5 19638160 19638464 -179991686 - AluSx SINE Alu -7 305 2 2690 78 101 12 chr5 19638603 19639011 -179991139 + MLT2A1 LTR ERVL 1 444 0 21 36 0 0 chr5 19639054 19639082 -179991068 + AT_rich Low_complexity Low_complexity 1 28 0 609 270 95 0 chr5 19639111 19639333 -179990817 - MIR SINE MIR -5 257 15 1813 187 25 104 chr5 19639860 19639921 -179990229 + Charlie1b DNA MER1_type 11 75 -2686 1840 85 38 114 chr5 19639921 19640237 -179989913 - AluYb8 SINE Alu -22 296 5 1539 128 178 8 chr5 19640243 19640501 -179989649 - AluY SINE Alu -9 302 1 1813 187 25 104 chr5 19640501 19640644 -179989506 + Charlie1b DNA MER1_type 80 233 -2528 2136 118 3 13 chr5 19640644 19640950 -179989200 - AluSx SINE Alu -9 303 1 1813 187 25 104 chr5 19640950 19641163 -179988987 + Charlie1b DNA MER1_type 233 384 -2377 2271 113 0 0 chr5 19641163 19641454 -179988696 - AluSx SINE Alu -21 291 1 1813 187 25 104 chr5 19641454 19641584 -179988566 + Charlie1b DNA MER1_type 384 523 0 1894 165 0 9 chr5 19642137 19642452 -179987698 - AluJb SINE Alu 0 312 1 2204 94 7 17 chr5 19642819 19643116 -179987034 - AluSx SINE Alu -18 294 1 252 0 0 0 chr5 19643399 19643427 -179986723 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 753 107 27 9 chr5 19643427 19643539 -179986611 - FLAM_C SINE Alu -24 119 6 862 157 11 62 chr5 19643554 19643732 -179986418 + FRAM SINE Alu 1 161 -15 2084 139 7 0 chr5 19644234 19644544 -179985606 - AluSp SINE Alu -1 312 1 265 246 53 18 chr5 19644750 19644864 -179985286 + L1P5 LINE L1 5483 5600 -556 1709 178 0 7 chr5 19645011 19645354 -179984796 - AluJb SINE Alu 0 341 1 186 43 0 0 chr5 19645360 19645383 -179984767 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2452 71 3 3 chr5 19645609 19645906 -179984244 - AluSp SINE Alu -16 297 1 1009 242 125 24 chr5 19646181 19646557 -179983593 + L1ME1 LINE L1 5748 6161 -5 1283 160 9 5 chr5 19646940 19647153 -179982997 + AluJo SINE Alu 87 300 -12 2517 71 0 7 chr5 19647886 19648195 -179981955 - AluY SINE Alu -4 307 1 34 24 0 0 chr5 19648214 19648255 -179981895 + AT_rich Low_complexity Low_complexity 1 41 0 183 246 98 0 chr5 19648448 19648509 -179981641 + L2 LINE L2 3247 3313 0 862 168 52 7 chr5 19648909 19649064 -179981086 - FRAM SINE Alu -18 158 1 243 0 0 0 chr5 19649064 19649091 -179981059 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2137 94 4 0 chr5 19649095 19649362 -179980788 - AluSg SINE Alu -30 280 13 1913 159 0 10 chr5 19649363 19649671 -179980479 - AluJb SINE Alu -7 305 1 283 263 21 11 chr5 19649739 19649834 -179980316 - L1M4 LINE L1 -1949 4197 4102 333 281 195 14 chr5 19651049 19651259 -179978891 + MIR SINE MIR 9 256 -6 2308 96 3 10 chr5 19651316 19651628 -179978522 - AluSg SINE Alu 0 310 1 2051 170 65 10 chr5 19651863 19652167 -179977983 + MER61C LTR ERV1 1 317 -117 2647 36 7 0 chr5 19652167 19652469 -179977681 - AluY SINE Alu -7 304 1 2051 170 65 10 chr5 19652469 19652594 -179977556 + MER61C LTR ERV1 317 434 0 2160 123 3 7 chr5 19653380 19653680 -179976470 - AluSx SINE Alu -13 299 1 2279 107 0 0 chr5 19654559 19654859 -179975291 - AluSx SINE Alu -12 300 1 774 176 8 0 chr5 19654883 19655008 -179975142 - FLAM_A SINE Alu -4 129 4 230 313 75 34 chr5 19655604 19655751 -179974399 + MIR3 SINE MIR 8 160 -48 1048 174 35 0 chr5 19655751 19655923 -179974227 - MER58A DNA MER1_type 0 224 47 593 176 44 52 chr5 19655932 19656068 -179974082 + L1MB3 LINE L1 6042 6176 -7 233 135 96 19 chr5 19656102 19656154 -179973996 - MER58A DNA MER1_type -168 56 1 194 283 67 0 chr5 19657229 19657289 -179972861 + L2 LINE L2 3194 3257 -56 236 277 116 0 chr5 19658614 19658726 -179971424 + MLT1L LTR MaLR 481 605 -10 2309 110 0 16 chr5 19659067 19659384 -179970766 + AluSx SINE Alu 1 312 0 285 266 76 0 chr5 19659611 19659690 -179970460 + MLT1I LTR MaLR 319 403 -6 733 231 61 39 chr5 19659885 19660114 -179970036 - MER46A DNA MER2_type 0 236 3 * 1025 193 25 55 chr5 19660114 19660214 -179969936 + MER46A DNA MER2_type 144 236 0 260 83 0 0 chr5 19660264 19660300 -179969850 + MER5B DNA MER1_type 3 38 -140 26 0 0 0 chr5 19660341 19660367 -179969783 + AT_rich Low_complexity Low_complexity 1 26 0 2077 120 0 0 chr5 19660367 19660643 -179969507 + AluSx SINE Alu 1 276 -36 207 0 0 0 chr5 19661090 19661113 -179969037 + (A)n Simple_repeat Simple_repeat 1 23 0 270 310 0 11 chr5 19661196 19661283 -179968867 - L2 LINE L2 -541 2773 2688 2114 67 22 8 chr5 19661300 19661568 -179968582 - AluSx SINE Alu -36 276 5 367 204 29 29 chr5 19661808 19661911 -179968239 + L1ME2 LINE L1 6055 6157 -7 312 329 96 14 chr5 19661924 19662143 -179968007 - L2 LINE L2 -849 2465 2229 253 281 70 53 chr5 19662283 19662511 -179967639 - L2 LINE L2 -1561 1753 1522 893 204 73 11 chr5 19662586 19662777 -179967373 + MER58A DNA MER1_type 6 208 -16 1704 144 46 25 chr5 19662999 19663283 -179966867 + AluSx SINE Alu 16 305 -7 2000 142 21 48 chr5 19663870 19664244 -179965906 + THE1B LTR MaLR 1 364 0 222 171 0 0 chr5 19664374 19664415 -179965735 + (TA)n Simple_repeat Simple_repeat 2 42 0 315 122 0 0 chr5 19665018 19665067 -179965083 + (CA)n Simple_repeat Simple_repeat 2 50 0 255 61 0 0 chr5 19665587 19665620 -179964530 + (CA)n Simple_repeat Simple_repeat 2 34 0 318 107 0 0 chr5 19665620 19665676 -179964474 + (GA)n Simple_repeat Simple_repeat 1 56 0 1949 154 7 0 chr5 19666799 19667098 -179963052 - AluSx SINE Alu -11 301 1 23 0 0 0 chr5 19667098 19667121 -179963029 + AT_rich Low_complexity Low_complexity 1 23 0 2399 63 7 10 chr5 19667124 19667426 -179962724 + AluSp SINE Alu 2 302 -11 22 0 0 0 chr5 19667857 19667879 -179962271 + AT_rich Low_complexity Low_complexity 1 22 0 501 146 63 101 chr5 19668704 19668810 -179961340 + L1MB4 LINE L1 5953 6053 -127 2094 119 11 0 chr5 19668810 19669096 -179961054 + AluSx SINE Alu 1 289 -23 501 146 63 101 chr5 19669096 19669147 -179961003 + L1MB4 LINE L1 6053 6104 -76 638 148 0 17 chr5 19669153 19669268 -179960882 - FLAM_C SINE Alu -1 142 30 453 183 0 0 chr5 19669270 19669352 -179960798 + L1MB4 LINE L1 6091 6172 -8 2168 107 7 3 chr5 19669396 19669695 -179960455 + AluSg SINE Alu 1 300 -10 422 239 8 0 chr5 19669696 19669830 -179960320 + GA-rich Low_complexity Low_complexity 2 136 0 * 840 125 5 27 chr5 19669801 19669985 -179960165 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1090 171 0 11 chr5 19670233 19670420 -179959730 + MLT1B LTR MaLR 1 185 -205 595 251 61 79 chr5 19670613 19670631 -179959519 + L1PB4 LINE L1 5546 5563 -593 1488 143 4 8 chr5 19670631 19670868 -179959282 + MER46A DNA MER2_type 1 236 0 595 251 61 79 chr5 19670868 19671179 -179958971 + L1PB4 LINE L1 5563 5869 -287 * 2443 164 107 35 chr5 19670907 19671345 -179958805 + L1MB5 LINE L1 5593 6079 -95 1650 182 35 43 chr5 19671345 19671741 -179958409 + MSTD LTR MaLR 4 396 0 2443 164 107 35 chr5 19671741 19671845 -179958305 + L1MB5 LINE L1 6079 6174 0 30 0 0 0 chr5 19672414 19672444 -179957706 + AT_rich Low_complexity Low_complexity 1 30 0 2091 132 0 3 chr5 19672983 19673279 -179956871 - AluSx SINE Alu -17 295 1 752 178 0 8 chr5 19673762 19673891 -179956259 + FLAM_C SINE Alu 2 129 -14 2044 127 0 13 chr5 19674698 19674997 -179955153 - AluSx SINE Alu -17 295 1 1325 181 24 0 chr5 19675337 19675585 -179954565 + L1MB3 LINE L1 5716 5969 -214 1144 169 74 4 chr5 19675586 19675829 -179954321 + L1MB2 LINE L1 5908 6167 -4 2432 78 10 0 chr5 19675862 19676170 -179953980 + AluY SINE Alu 1 311 0 1657 139 45 45 chr5 19676320 19676629 -179953521 + AluJb SINE Alu 1 309 -3 1768 156 24 17 chr5 19676629 19676924 -179953226 + AluJb SINE Alu 1 297 -15 601 105 0 0 chr5 19678077 19678163 -179951987 + AluS SINE Alu 2 87 -226 1618 141 21 4 chr5 19678163 19678404 -179951746 + AluJb SINE Alu 46 290 -22 2285 110 13 0 chr5 19678666 19678974 -179951176 + AluSx SINE Alu 1 312 0 280 211 0 77 chr5 19679465 19679548 -179950602 + L1MA9 LINE L1 6217 6305 -7 1815 126 13 53 chr5 19679548 19679850 -179950300 + AluSx SINE Alu 1 290 -22 2288 70 13 20 chr5 19679850 19680148 -179950002 + AluY SINE Alu 1 296 -15 280 211 0 77 chr5 19680148 19680167 -179949983 + L1MA9 LINE L1 6303 6312 0 1757 165 16 32 chr5 19681667 19681983 -179948167 + AluJo SINE Alu 1 311 -1 2354 90 7 0 chr5 19682157 19682456 -179947694 - AluSg SINE Alu -9 301 1 1612 162 72 7 chr5 19683996 19684274 -179945876 + AluJo SINE Alu 1 296 -16 2273 101 10 3 chr5 19684274 19684581 -179945569 + AluSx SINE Alu 1 309 -3 765 242 68 5 chr5 19684660 19684850 -179945300 - MER20 DNA MER1_type -17 202 1 1928 157 0 3 chr5 19685025 19685331 -179944819 - AluJb SINE Alu -7 305 1 24 0 0 0 chr5 19686402 19686426 -179943724 + AT_rich Low_complexity Low_complexity 1 24 0 1205 200 0 96 chr5 19686720 19687065 -179943085 + AluJo SINE Alu 1 312 0 1784 228 77 57 chr5 19687077 19687626 -179942524 + MLT1E2 LTR MaLR 1 565 -61 2423 49 3 23 chr5 19687626 19687930 -179942220 - AluY SINE Alu -13 298 1 1784 228 77 57 chr5 19687930 19687994 -179942156 + MLT1E2 LTR MaLR 565 626 0 731 176 24 0 chr5 19688533 19688658 -179941492 + FLAM_A SINE Alu 4 131 -2 1044 222 17 17 chr5 19688704 19688938 -179941212 - MER46A DNA MER2_type -1 235 2 235 304 0 0 chr5 19689027 19689096 -179941054 - L2 LINE L2 -3 3310 3242 2287 84 7 7 chr5 19689543 19689839 -179940311 + AluSc SINE Alu 1 296 -13 2421 71 10 0 chr5 19690017 19690313 -179939837 - AluSc SINE Alu -10 299 1 2286 100 0 0 chr5 19690313 19690602 -179939548 - AluSg SINE Alu -20 290 2 504 48 0 0 chr5 19691836 19691899 -179938251 + (TG)n Simple_repeat Simple_repeat 2 64 0 1701 168 16 20 chr5 19691922 19692225 -179937925 - AluJb SINE Alu -10 302 1 352 166 81 8 chr5 19694292 19694660 -179935490 + (TA)n Simple_repeat Simple_repeat 1 395 0 2720 51 0 0 chr5 19694937 19695248 -179934902 - AluY SINE Alu 0 311 1 187 239 0 0 chr5 19695550 19695596 -179934554 + MIR SINE MIR 202 247 -15 908 79 173 0 chr5 19695620 19695759 -179934391 + L1PA11 LINE L1 6012 6174 0 265 294 95 47 chr5 19695868 19696079 -179934071 - L2 LINE L2 -105 3208 2988 2653 48 0 0 chr5 19696156 19696467 -179933683 - AluY SINE Alu 0 311 1 1990 130 0 11 chr5 19696674 19696958 -179933192 + AluSx SINE Alu 1 281 -31 180 150 0 0 chr5 19696963 19696983 -179933167 + (G)n Simple_repeat Simple_repeat 1 20 -20 2494 63 3 7 chr5 19696983 19697286 -179932864 - AluY SINE Alu -9 302 1 180 150 0 0 chr5 19697286 19697305 -179932845 + (G)n Simple_repeat Simple_repeat 19 40 0 470 207 0 63 chr5 19697831 19697942 -179932208 + MER20 DNA MER1_type 36 139 -80 2308 81 0 3 chr5 19698100 19698407 -179931743 + AluSc SINE Alu 1 306 0 485 250 149 0 chr5 19698904 19699092 -179931058 + MER112 DNA MER1_type 7 222 -38 879 204 6 0 chr5 19699215 19699372 -179930778 + AluSg/x SINE Alu 134 291 -19 2104 126 0 22 chr5 19699375 19699692 -179930458 + AluSg SINE Alu 1 310 0 280 326 50 21 chr5 19699805 19699946 -179930204 + MIR SINE MIR 104 248 -14 2146 114 7 10 chr5 19700800 19701099 -179929051 - AluSx SINE Alu -14 298 1 304 236 176 34 chr5 19701302 19701450 -179928700 - MIR SINE MIR -14 248 80 208 225 42 56 chr5 19701527 19701598 -179928552 + MIR SINE MIR 41 110 -152 1899 120 0 47 chr5 19701859 19702159 -179927991 + AluSx SINE Alu 24 309 -3 712 126 150 8 chr5 19702242 19702393 -179927757 - FRAM SINE Alu 0 169 1 248 237 79 26 chr5 19702483 19702559 -179927591 - L2 LINE L2 -49 3223 3144 270 81 0 0 chr5 19703399 19703436 -179926714 + (CA)n Simple_repeat Simple_repeat 2 38 0 2088 115 17 3 chr5 19703472 19703768 -179926382 + AluSx SINE Alu 1 300 -12 242 258 0 15 chr5 19704021 19704087 -179926063 + L1ME LINE L1 5601 5665 -456 363 23 0 0 chr5 19704194 19704238 -179925912 + (CA)n Simple_repeat Simple_repeat 1 44 0 1451 189 65 3 chr5 19704240 19704616 -179925534 + L1MD1 LINE L1 5626 6172 -70 * 5867 87 1 5 chr5 19704615 19705419 -179924731 + L1PB1 LINE L1 5351 6151 0 1519 182 27 17 chr5 19705481 19705777 -179924373 - AluJb SINE Alu -13 299 1 2346 101 0 0 chr5 19706750 19707047 -179923103 - AluSg SINE Alu -13 297 1 234 297 9 63 chr5 19707205 19707316 -179922834 + MIR SINE MIR 41 145 -63 2049 98 11 14 chr5 19708433 19708710 -179921440 + AluSg SINE Alu 5 280 -30 1512 103 94 5 chr5 19708789 19709012 -179921138 + AluSx SINE Alu 1 243 -69 189 0 0 0 chr5 19709028 19709049 -179921101 + (T)n Simple_repeat Simple_repeat 1 21 0 3288 157 47 8 chr5 19710270 19710563 -179919587 + L1MB7 LINE L1 5533 5813 -371 2258 98 3 0 chr5 19710563 19710859 -179919291 + AluSp SINE Alu 1 297 -16 3288 157 47 8 chr5 19710859 19711188 -179918962 + L1MB7 LINE L1 5813 6179 -5 10409 122 59 12 chr5 19711314 19712987 -179917163 + Tigger1 DNA MER2_type 40 1791 -627 1989 144 10 0 chr5 19712992 19713283 -179916867 + AluJb SINE Alu 1 294 -18 1235 146 0 0 chr5 19713298 19713490 -179916660 + Tigger5 DNA MER2_type 2132 2323 0 2006 128 3 3 chr5 19713662 19713944 -179916206 + AluSx SINE Alu 1 282 -30 261 75 0 0 chr5 19713944 19713984 -179916166 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr5 19714356 19714377 -179915773 + AT_rich Low_complexity Low_complexity 1 21 0 2266 96 0 10 chr5 19714387 19714688 -179915462 + AluSq SINE Alu 1 298 -15 1344 167 119 19 chr5 19716183 19716452 -179913698 + AluJo SINE Alu 14 309 -3 243 125 0 0 chr5 19716846 19716886 -179913264 + (CATA)n Simple_repeat Simple_repeat 1 40 0 471 206 84 8 chr5 19716944 19717075 -179913075 - MIR SINE MIR -88 174 34 384 22 0 0 chr5 19718478 19718523 -179911627 + (CA)n Simple_repeat Simple_repeat 2 46 0 1279 191 68 18 chr5 19718928 19719206 -179910944 + AluJo SINE Alu 1 292 -20 2441 92 0 0 chr5 19719228 19719531 -179910619 + AluSc SINE Alu 1 303 -6 2255 124 0 0 chr5 19720380 19720678 -179909472 + AluSx SINE Alu 1 298 -14 2271 90 24 0 chr5 19720694 19720982 -179909168 + AluY SINE Alu 1 295 -16 1794 174 11 0 chr5 19720993 19721280 -179908870 + AluJb SINE Alu 1 290 -22 1068 180 0 0 chr5 19721282 19721454 -179908696 + FAM SINE Alu 1 172 -3 927 142 20 0 chr5 19721739 19721887 -179908263 + FAM SINE Alu 22 172 -13 665 110 0 63 chr5 19722133 19722260 -179907890 - AluSp/q SINE Alu -6 307 189 933 138 6 50 chr5 19722348 19722508 -179907642 - AluSx SINE Alu -159 153 1 1043 149 0 0 chr5 19723014 19723168 -179906982 - FRAM SINE Alu -22 154 1 2162 95 3 14 chr5 19724313 19724625 -179905525 - AluSg SINE Alu 0 309 1 21 0 0 0 chr5 19724627 19724648 -179905502 + AT_rich Low_complexity Low_complexity 1 21 0 1866 120 25 32 chr5 19724869 19725153 -179904997 - AluSx SINE Alu -30 282 1 2440 95 0 0 chr5 19725820 19726126 -179904024 + AluSg SINE Alu 1 306 -4 269 106 0 21 chr5 19726142 19726189 -179903961 + (GGAA)n Simple_repeat Simple_repeat 1 46 0 188 333 93 0 chr5 19726756 19726864 -179903286 + MIR3 SINE MIR 85 202 -6 2493 63 0 13 chr5 19727132 19727432 -179902718 + AluY SINE Alu 1 296 -15 573 128 0 32 chr5 19728037 19728131 -179902019 + 5S rRNA rRNA 1 91 -30 1272 205 38 40 chr5 19728710 19729057 -179901093 + L1MB8 LINE L1 5796 6141 -37 225 0 0 0 chr5 19729077 19729102 -179901048 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2192 119 3 3 chr5 19729106 19729409 -179900741 + AluSq SINE Alu 1 303 -10 180 314 0 0 chr5 19729929 19729980 -179900170 - L3 LINE CR1 -1201 376 326 2150 112 31 0 chr5 19730633 19730919 -179899231 + AluSx SINE Alu 1 295 -17 290 222 201 21 chr5 19731060 19731204 -179898946 - MER96 DNA MER1_type? -2 173 4 721 239 11 37 chr5 19731840 19732028 -179898122 + MER5A DNA MER1_type 7 189 0 291 284 46 18 chr5 19732168 19732277 -179897873 - MER5B DNA MER1_type -62 116 5 795 215 143 5 chr5 19732475 19732684 -179897466 - MER58 DNA MER1_type -2182 238 1 180 0 0 0 chr5 19732801 19732821 -179897329 + (A)n Simple_repeat Simple_repeat 1 20 0 2105 139 0 0 chr5 19733040 19733335 -179896815 + AluSg SINE Alu 1 295 -15 1914 179 24 3 chr5 19733504 19733833 -179896317 - MLT1A1 LTR MaLR -4 361 26 1531 178 8 4 chr5 19733847 19734111 -179896039 + AluJo SINE Alu 22 286 -26 242 143 0 0 chr5 19734124 19734159 -179895991 - MLT1A1 LTR MaLR -330 35 1 338 299 53 48 chr5 19734755 19734942 -179895208 - MER5A DNA MER1_type 0 189 2 189 147 0 0 chr5 19735113 19735147 -179895003 + (TGGA)n Simple_repeat Simple_repeat 3 36 0 559 253 53 24 chr5 19735349 19735519 -179894631 - MER5B DNA MER1_type -1 177 3 2169 92 0 20 chr5 19735646 19735950 -179894200 + AluSq SINE Alu 1 298 -15 269 309 47 54 chr5 19736172 19736321 -179893829 + MIR SINE MIR 41 188 -74 25 0 0 0 chr5 19736919 19736944 -179893206 + AT_rich Low_complexity Low_complexity 1 25 0 1714 182 0 0 chr5 19738179 19738481 -179891669 + AluJb SINE Alu 1 302 -10 1353 114 3 70 chr5 19739908 19740246 -179889904 + AluSx SINE Alu 21 312 0 600 176 91 30 chr5 19740247 19740406 -179889744 + L1MB4 LINE L1 6005 6174 -1 477 0 0 0 chr5 19740406 19740459 -179889691 + (CA)n Simple_repeat Simple_repeat 2 54 0 386 216 0 0 chr5 19740853 19740927 -179889223 + MER116 DNA Mariner 1 74 -6 2126 87 0 10 chr5 19742725 19743024 -179887126 + AluY SINE Alu 1 296 -15 915 197 82 41 chr5 19743396 19743425 -179886725 + AluJo SINE Alu 9 35 -277 2123 82 0 50 chr5 19743425 19743744 -179886406 - AluY SINE Alu -8 303 1 915 197 82 41 chr5 19743744 19743983 -179886167 + AluJo SINE Alu 35 288 -24 1619 145 0 30 chr5 19743991 19744288 -179885862 + AluSx SINE Alu 1 288 -24 21 36 0 0 chr5 19744289 19744317 -179885833 + AT_rich Low_complexity Low_complexity 1 28 0 270 81 0 0 chr5 19744329 19744366 -179885784 + (AGGGGG)n Simple_repeat Simple_repeat 5 41 0 395 202 225 23 chr5 19744810 19744939 -179885211 + MER5A DNA MER1_type 14 168 -21 1974 104 3 10 chr5 19745031 19745329 -179884821 + AluSp SINE Alu 4 299 -14 828 207 5 5 chr5 19745431 19745619 -179884531 - L1MB3 LINE L1 -10 6173 5986 1646 178 28 0 chr5 19745753 19746040 -179884110 + AluJb SINE Alu 1 295 -17 1430 189 88 1 chr5 19746655 19746957 -179883193 + L1MB2 LINE L1 5837 6164 -7 2709 67 32 3 chr5 19747042 19747387 -179882763 - THE1A LTR MaLR 0 355 1 11550 92 10 19 chr5 19747387 19748473 -179881677 - THE1A-int LTR MaLR 0 1580 511 2255 83 0 0 chr5 19748473 19748763 -179881387 + AluY SINE Alu 1 290 -21 11550 92 10 19 chr5 19748763 19749270 -179880880 - THE1A-int LTR MaLR -1069 511 1 2518 58 92 0 chr5 19749270 19749595 -179880555 - THE1A LTR MaLR 0 355 1 1800 127 0 18 chr5 19750282 19750565 -179879585 + AluSx SINE Alu 35 312 0 1984 127 0 0 chr5 19750985 19751277 -179878873 - AluSx SINE Alu -20 292 1 1630 184 46 23 chr5 19751281 19751629 -179878521 + MLT1A1 LTR MaLR 10 365 0 436 246 109 0 chr5 19752425 19752563 -179877587 - MIR SINE MIR -95 167 15 2442 104 3 6 chr5 19753059 19753415 -179876735 + L1PB2 LINE L1 5797 6151 0 209 248 137 18 chr5 19753958 19754084 -179876066 - MIR SINE MIR -57 151 5 1894 152 3 7 chr5 19754318 19754628 -179875522 + AluSx SINE Alu 1 309 -3 1981 243 80 19 chr5 19756680 19757323 -179872827 + L1ME1 LINE L1 5465 6160 -6 2461 69 0 0 chr5 19757333 19757638 -179872512 - AluY SINE Alu -6 305 1 240 183 256 0 chr5 19758013 19758095 -179872055 + MER58B DNA MER1_type 202 304 -37 1497 172 37 17 chr5 19758537 19758834 -179871316 + AluJb SINE Alu 6 308 -4 334 155 52 0 chr5 19759214 19759272 -179870878 - MER20 DNA MER1_type -4 215 155 2098 116 3 3 chr5 19759814 19760117 -179870033 + AluSx SINE Alu 1 303 -9 2024 136 0 0 chr5 19761074 19761384 -179868766 + AluSx SINE Alu 1 310 -2 2058 132 0 0 chr5 19761911 19762214 -179867936 - AluSx SINE Alu -9 303 1 224 282 13 0 chr5 19762510 19762588 -179867562 + (TCCA)n Simple_repeat Simple_repeat 3 81 0 1329 178 60 57 chr5 19762670 19762815 -179867335 + AluJo SINE Alu 1 144 -158 1570 109 5 0 chr5 19762815 19763035 -179867115 + AluSp SINE Alu 79 299 -14 1329 178 60 57 chr5 19763035 19763187 -179866963 + AluJo SINE Alu 144 299 -3 1869 155 0 16 chr5 19763312 19763628 -179866522 + AluJb SINE Alu 1 311 -1 1420 112 0 0 chr5 19763628 19763824 -179866326 + AluSg/x SINE Alu 85 280 -32 546 141 8 25 chr5 19763846 19763967 -179866183 + GA-rich Low_complexity Low_complexity 2 120 0 2710 164 36 17 chr5 19764609 19764955 -179865195 + L1MB8 LINE L1 5472 5810 -368 2111 117 0 0 chr5 19764955 19765254 -179864896 + AluSx SINE Alu 6 304 -8 2710 164 36 17 chr5 19765254 19765393 -179864757 + L1MB8 LINE L1 5810 5915 -263 1351 159 3 111 chr5 19765393 19765726 -179864424 + AluSx SINE Alu 1 297 -5 2710 164 36 17 chr5 19765726 19765778 -179864372 + L1MB8 LINE L1 5915 5965 -213 1126 160 9 41 chr5 19765800 19766019 -179864131 + L1MB7 LINE L1 5953 6164 -20 199 313 0 0 chr5 19766411 19766459 -179863691 + L2 LINE L2 3229 3276 -37 1616 180 0 7 chr5 19766735 19767040 -179863110 + AluSx SINE Alu 2 304 -8 2533 51 0 6 chr5 19767289 19767602 -179862548 + AluY SINE Alu 1 311 0 2090 125 3 3 chr5 19767743 19768048 -179862102 + AluSx SINE Alu 2 306 -6 1131 220 52 12 chr5 19768389 19768769 -179861381 - L1MC3 LINE L1 -7 7778 7349 484 274 64 32 chr5 19768786 19768943 -179861207 + MIR SINE MIR 35 196 -66 198 0 0 0 chr5 19770144 19770166 -179859984 + (CA)n Simple_repeat Simple_repeat 2 23 0 697 176 0 0 chr5 19770551 19770659 -179859491 + FLAM_C SINE Alu 13 120 -23 2044 127 10 0 chr5 19770676 19770983 -179859167 + AluSx SINE Alu 1 310 -2 350 188 27 9 chr5 19771291 19771403 -179858747 + GA-rich Low_complexity Low_complexity 3 116 0 198 0 0 0 chr5 19771665 19771687 -179858463 + (A)n Simple_repeat Simple_repeat 1 22 0 813 159 32 16 chr5 19772571 19772760 -179857390 - Charlie5 DNA MER1_type -41 2571 2380 1900 107 16 23 chr5 19772771 19773081 -179857069 - AluSq SINE Alu -3 310 3 1902 151 3 3 chr5 19774318 19774622 -179855528 + AluSx SINE Alu 1 304 -8 2041 135 0 0 chr5 19775579 19775890 -179854260 + AluSx SINE Alu 1 311 -1 2009 139 0 0 chr5 19776417 19776720 -179853430 - AluSx SINE Alu -9 303 1 224 282 13 0 chr5 19777016 19777094 -179853056 + (TCCA)n Simple_repeat Simple_repeat 3 81 0 1329 178 60 57 chr5 19777176 19777321 -179852829 + AluJo SINE Alu 1 144 -158 1570 109 5 0 chr5 19777321 19777541 -179852609 + AluSp SINE Alu 79 299 -14 1329 178 60 57 chr5 19777541 19777693 -179852457 + AluJo SINE Alu 144 299 -3 1842 154 0 25 chr5 19777818 19778137 -179852013 + AluJb SINE Alu 1 311 -1 1403 124 10 0 chr5 19778138 19778347 -179851803 + AluSg/x SINE Alu 84 294 -16 774 127 13 7 chr5 19778355 19778505 -179851645 + GA-rich Low_complexity Low_complexity 2 152 0 2728 165 35 17 chr5 19779149 19779495 -179850655 + L1MB8 LINE L1 5472 5810 -368 2111 117 0 0 chr5 19779495 19779794 -179850356 + AluSx SINE Alu 6 304 -8 2728 165 35 17 chr5 19779794 19779933 -179850217 + L1MB8 LINE L1 5810 5910 -268 1680 146 7 45 chr5 19779933 19780242 -179849908 + AluSx SINE Alu 1 297 -15 2728 165 35 17 chr5 19780242 19780300 -179849850 + L1MB8 LINE L1 5910 5965 -213 1126 160 9 41 chr5 19780317 19780536 -179849614 + L1MB7 LINE L1 5953 6164 -20 199 313 0 0 chr5 19780928 19780976 -179849174 + L2 LINE L2 3229 3276 -37 1616 180 0 7 chr5 19781252 19781557 -179848593 + AluSx SINE Alu 2 304 -8 2425 62 0 7 chr5 19781806 19782113 -179848037 + AluY SINE Alu 1 305 -6 2043 127 3 7 chr5 19782247 19782554 -179847596 + AluSx SINE Alu 2 307 -5 1131 220 52 12 chr5 19782895 19783275 -179846875 - L1MC3 LINE L1 -7 7778 7349 417 310 51 25 chr5 19783291 19783449 -179846701 + MIR SINE MIR 35 196 -66 414 0 0 0 chr5 19784647 19784693 -179845457 + (CA)n Simple_repeat Simple_repeat 2 47 0 697 176 0 0 chr5 19785078 19785186 -179844964 + FLAM_C SINE Alu 13 120 -23 2056 124 10 0 chr5 19785203 19785510 -179844640 + AluSx SINE Alu 1 310 -2 350 188 27 9 chr5 19785818 19785930 -179844220 + GA-rich Low_complexity Low_complexity 3 116 0 1123 202 22 45 chr5 19787098 19787297 -179842853 - MER33 DNA MER1_type -2275 310 119 2291 85 13 0 chr5 19787297 19787602 -179842548 - AluSq SINE Alu -4 309 1 1123 202 22 45 chr5 19787602 19787714 -179842436 - MER33 DNA MER1_type -2466 119 6 2035 86 39 0 chr5 19787767 19788047 -179842103 + AluSx SINE Alu 11 301 -11 1901 110 30 7 chr5 19788246 19788546 -179841604 + AluSq SINE Alu 1 307 -6 2120 120 0 0 chr5 19788610 19788919 -179841231 + AluSx SINE Alu 1 309 -3 2038 111 31 0 chr5 19789636 19789925 -179840225 - AluSx SINE Alu -14 298 1 1017 130 65 16 chr5 19790936 19791121 -179839029 - AluSq SINE Alu 0 313 120 903 97 60 8 chr5 19791560 19791694 -179838456 - AluSq SINE Alu -170 143 3 226 217 17 17 chr5 19791757 19791817 -179838333 - L2 LINE L2 0 3313 3254 510 252 31 117 chr5 19791904 19792023 -179838127 - MIR SINE MIR 0 262 169 2070 84 7 14 chr5 19792023 19792308 -179837842 + AluSg SINE Alu 3 285 -25 510 252 31 117 chr5 19792308 19792410 -179837740 - MIR SINE MIR -93 169 60 2788 209 49 17 chr5 19792798 19793543 -179836607 + MER21B LTR ERV1 1 816 -47 2360 58 0 0 chr5 19793543 19793836 -179836314 + AluY SINE Alu 1 293 -18 2788 209 49 17 chr5 19793836 19793865 -179836285 + MER21B LTR ERV1 816 843 -20 194 0 39 0 chr5 19794427 19794453 -179835697 + (CAGC)n Simple_repeat Simple_repeat 1 27 0 678 222 151 5 chr5 19795211 19795396 -179834754 - MER20 DNA MER1_type -5 214 3 2236 102 0 6 chr5 19795725 19796039 -179834111 + AluSx SINE Alu 1 312 0 202 297 81 27 chr5 19796140 19796214 -179833936 - MIR SINE MIR -183 79 2 1876 125 7 14 chr5 19796847 19797135 -179833015 + AluSx SINE Alu 1 286 -26 1986 109 36 0 chr5 19797142 19797440 -179832710 + AluSx SINE Alu 1 308 0 1284 160 15 0 chr5 19797692 19797898 -179832252 + L1MB5 LINE L1 5819 6027 -147 2477 107 3 50 chr5 19797912 19798123 -179832027 - THE1B LTR MaLR 0 364 177 2029 104 7 3 chr5 19798123 19798420 -179831730 + AluSg SINE Alu 1 298 -12 2477 107 3 50 chr5 19798420 19798590 -179831560 - THE1B LTR MaLR -187 177 1 2357 162 29 5 chr5 19798599 19799007 -179831143 + MSTB1 LTR MaLR 15 432 0 611 203 55 3 chr5 19799010 19799165 -179830985 + L1MB5 LINE L1 6022 6184 0 263 286 58 56 chr5 19799215 19799337 -179830813 - MIR SINE MIR -78 130 28 233 277 118 8 chr5 19799344 19799463 -179830687 + MIR SINE MIR 130 261 -1 620 295 34 54 chr5 19799494 19799757 -179830393 - MIR SINE MIR -5 257 3 476 183 0 0 chr5 19799961 19800043 -179830107 + FLAM SINE Alu 45 126 -17 1154 84 168 45 chr5 19800261 19800348 -179829802 - MER30 DNA MER1_type 0 230 155 1762 169 3 0 chr5 19800348 19800650 -179829500 + AluJb SINE Alu 2 304 -8 2275 79 10 0 chr5 19800652 19800944 -179829206 + AluSq SINE Alu 1 295 -18 198 0 0 0 chr5 19800949 19800971 -179829179 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1154 84 168 45 chr5 19800971 19801076 -179829074 - MER30 DNA MER1_type -78 152 4 486 230 40 40 chr5 19801093 19801245 -179828905 + Charlie8 DNA MER1_type 28 179 -2238 459 0 0 0 chr5 19801699 19801750 -179828400 + (CA)n Simple_repeat Simple_repeat 1 51 0 254 294 37 28 chr5 19803912 19804021 -179826129 + MIR3 SINE MIR 65 174 -34 2200 102 0 3 chr5 19804573 19804878 -179825272 + AluSx SINE Alu 1 304 -8 216 0 0 0 chr5 19805305 19805329 -179824821 + (A)n Simple_repeat Simple_repeat 1 24 0 1036 210 19 5 chr5 19806234 19806448 -179823702 - MER20 DNA MER1_type 0 219 3 1240 185 3 70 chr5 19806472 19806785 -179823365 + AluJo SINE Alu 1 292 -20 2401 84 6 0 chr5 19807392 19807703 -179822447 - AluSp SINE Alu 0 313 1 180 274 73 48 chr5 19807872 19807996 -179822154 - L3 LINE CR1 -155 1422 1296 2063 125 0 3 chr5 19807997 19808308 -179821842 + AluSx SINE Alu 1 310 -2 798 294 9 5 chr5 19808346 19808560 -179821590 + MIR SINE MIR 34 248 -14 2042 127 0 13 chr5 19808597 19808733 -179821417 + AluSx SINE Alu 1 137 -175 2177 109 0 0 chr5 19808733 19809027 -179821123 + AluSc SINE Alu 1 294 -15 2042 127 0 13 chr5 19809027 19809205 -179820945 + AluSx SINE Alu 137 311 -1 1492 243 120 24 chr5 19809220 19809725 -179820425 + L1MD3 LINE L1 5791 7977 -18 2104 92 3 3 chr5 19809738 19810065 -179820085 + AluSx SINE Alu 1 327 0 213 121 0 0 chr5 19810530 19810563 -179819587 + (A)n Simple_repeat Simple_repeat 1 33 0 726 178 64 99 chr5 19810640 19810842 -179819308 + MER20 DNA MER1_type 1 195 -24 2226 88 3 0 chr5 19810845 19811141 -179819009 + AluSx SINE Alu 1 297 -15 1849 168 0 0 chr5 19811661 19811970 -179818180 + AluJb SINE Alu 1 309 -3 2338 64 3 3 chr5 19812203 19812499 -179817651 - AluY SINE Alu -15 296 1 303 71 0 0 chr5 19812566 19812608 -179817542 + (CA)n Simple_repeat Simple_repeat 2 43 0 1694 186 0 0 chr5 19812723 19813024 -179817126 + AluJo SINE Alu 1 301 -11 363 228 124 41 chr5 19813405 19813550 -179816600 + L1ME LINE L1 5600 5756 -365 1396 198 98 76 chr5 19813639 19813746 -179816404 + Zaphod DNA AcHobo 2786 2889 -1142 2458 60 0 3 chr5 19813746 19814048 -179816102 - AluY SINE Alu -10 301 1 1396 198 98 76 chr5 19814048 19814384 -179815766 + Zaphod DNA AcHobo 2889 3246 -785 1825 94 0 4 chr5 19814384 19814629 -179815521 - AluSq SINE Alu -69 244 1 1396 198 98 76 chr5 19814629 19814736 -179815414 + Zaphod DNA AcHobo 3246 3349 -682 631 168 154 0 chr5 19814749 19814892 -179815258 - MER46A DNA MER2_type -9 227 63 638 209 87 15 chr5 19814892 19815088 -179815062 + L1MA4 LINE L1 6086 6295 -5 356 180 0 0 chr5 19815098 19815159 -179814991 - MER46A DNA MER2_type -175 61 1 1952 206 136 22 chr5 19815160 19815337 -179814813 + Zaphod DNA AcHobo 3349 3504 -527 1846 165 0 0 chr5 19815337 19815640 -179814510 + AluSx SINE Alu 1 303 -9 1952 206 136 22 chr5 19815640 19816064 -179814086 + Zaphod DNA AcHobo 3504 4019 -12 2242 73 0 0 chr5 19816222 19816539 -179813611 - AluY SINE Alu 0 311 1 22 35 0 0 chr5 19817098 19817127 -179813023 + AT_rich Low_complexity Low_complexity 1 29 0 1713 97 58 0 chr5 19817136 19817394 -179812756 - AluSx SINE Alu -25 287 15 2091 118 0 0 chr5 19817479 19817784 -179812366 + AluY SINE Alu 1 305 -6 2456 50 0 3 chr5 19817867 19818170 -179811980 - AluY SINE Alu -9 302 1 1067 219 13 17 chr5 19818368 19818606 -179811544 + MIR SINE MIR 1 237 -25 389 215 0 0 chr5 19818608 19818673 -179811477 + MER2 DNA MER2_type 1 65 -280 * 637 127 85 42 chr5 19818668 19818786 -179811364 + MER2 DNA MER2_type 223 345 0 187 293 181 17 chr5 19819564 19819680 -179810470 - MIR SINE MIR -15 247 113 2237 78 3 0 chr5 19819907 19820223 -179809927 + AluSp SINE Alu 1 317 0 252 210 16 48 chr5 19821250 19821312 -179808838 - L2 LINE L2 -18 3295 3236 1431 137 125 0 chr5 19821715 19821971 -179808179 - AluJb SINE Alu -24 288 1 916 205 95 0 chr5 19822065 19822265 -179807885 + MER20 DNA MER1_type 1 219 0 195 281 37 37 chr5 19822889 19822971 -179807179 + MIR3 SINE MIR 93 174 -34 30 0 0 0 chr5 19824381 19824411 -179805739 + GC_rich Low_complexity Low_complexity 1 30 0 279 217 0 89 chr5 19825214 19825371 -179804779 + (CCCCG)n Simple_repeat Simple_repeat 1 143 0 188 294 118 0 chr5 19826189 19826257 -179803893 + MER5C DNA MER1_type 248 323 -1 225 159 0 101 chr5 19826270 19826339 -179803811 + L2 LINE L2 2989 3050 -222 926 146 35 12 chr5 19826955 19827126 -179803024 + L1MC2 LINE L1 6168 6342 -2 348 247 94 47 chr5 19829523 19829608 -179800542 + MER45A DNA AcHobo 1 89 -89 1937 110 0 0 chr5 19829714 19829978 -179800172 - AluSg SINE Alu -45 265 2 2190 90 0 10 chr5 19829980 19830281 -179799869 - AluSg SINE Alu -12 298 1 401 290 94 7 chr5 19830285 19830423 -179799727 - MIR SINE MIR -56 206 57 201 373 0 15 chr5 19830466 19830533 -179799617 - MIR SINE MIR -194 68 3 720 186 8 0 chr5 19830609 19830733 -179799417 + FLAM_C SINE Alu 2 126 -17 1845 145 33 0 chr5 19830786 19831089 -179799061 - AluSp SINE Alu 0 313 1 2447 26 3 16 chr5 19831190 19831500 -179798650 - AluY SINE Alu -5 306 1 2009 118 3 7 chr5 19831508 19831813 -179798337 - AluSq SINE Alu -9 304 1 641 159 0 19 chr5 19831841 19831948 -179798202 - U6 snRNA snRNA -2 105 1 610 193 0 9 chr5 19831972 19832081 -179798069 - FRAM SINE Alu -61 115 8 2186 106 0 10 chr5 19832095 19832406 -179797744 - AluSx SINE Alu -4 308 1 401 206 0 0 chr5 19832409 19832482 -179797668 + MER45A DNA AcHobo 102 174 -4 1562 153 42 39 chr5 19832713 19833021 -179797129 + AluJo SINE Alu 1 309 -3 200 151 0 38 chr5 19833460 19833513 -179796637 + A-rich Low_complexity Low_complexity 3 53 0 1867 121 13 16 chr5 19833808 19834089 -179796061 + AluSq SINE Alu 1 282 -31 1103 42 0 7 chr5 19834089 19834231 -179795919 + (GGAA)n Simple_repeat Simple_repeat 4 144 0 1867 121 13 16 chr5 19834231 19834263 -179795887 + AluSq SINE Alu 282 313 0 282 288 0 0 chr5 19834271 19834351 -179795799 + L1MC/D LINE L1 5722 5801 -2007 350 273 224 47 chr5 19834354 19834722 -179795428 - MLT1H LTR MaLR 0 549 101 1447 153 113 11 chr5 19834722 19834996 -179795154 - AluSx SINE Alu -10 302 1 350 273 224 47 chr5 19834996 19835033 -179795117 - MLT1H LTR MaLR -448 101 72 1752 181 62 8 chr5 19835062 19835416 -179794734 - L1MB5 LINE L1 -13 6161 5789 904 151 87 6 chr5 19835432 19835604 -179794546 - MER30 DNA MER1_type -44 186 1 1334 131 100 0 chr5 19835604 19835833 -179794317 - L1MB5 LINE L1 -378 5796 5545 1266 66 52 104 chr5 19835965 19836036 -179794114 + AluSg/x SINE Alu 84 157 -156 2041 121 3 3 chr5 19836036 19836342 -179793808 + AluSx SINE Alu 1 306 -6 1266 66 52 104 chr5 19836342 19836511 -179793639 + AluSg/x SINE Alu 157 313 0 824 145 7 29 chr5 19836561 19836699 -179793451 + AluJo SINE Alu 2 136 -176 2166 141 126 8 chr5 19836705 19837087 -179793063 + MSTA LTR MaLR 2 428 0 431 152 13 38 chr5 19837282 19837361 -179792789 + THE1C LTR MaLR 299 375 0 1550 131 11 69 chr5 19837361 19837636 -179792514 + MLT1B LTR MaLR 132 390 0 322 414 57 5 chr5 19837636 19837846 -179792304 - L2 LINE L2 -214 3058 2838 441 271 47 0 chr5 19837890 19837997 -179792153 + MER63 DNA MER1_type 2 739 -323 2261 89 0 16 chr5 19838000 19838315 -179791835 - AluY SINE Alu -1 310 1 983 195 4 17 chr5 19838673 19838904 -179791246 - AluJb SINE Alu 0 312 85 1338 96 216 24 chr5 19838904 19839154 -179790996 - AluSg1 SINE Alu -7 302 5 453 243 77 163 chr5 19839193 19839531 -179790619 + L2 LINE L2 2834 3199 -114 785 267 42 9 chr5 19839531 19839748 -179790402 + MER58A DNA MER1_type 1 224 0 453 243 77 163 chr5 19839748 19839773 -179790377 + L2 LINE L2 3199 3225 -88 1746 130 102 128 chr5 19839773 19839948 -179790202 + MSTA LTR MaLR 1 179 -249 1977 121 0 0 chr5 19839948 19840229 -179789921 + AluSg SINE Alu 1 281 -29 1746 130 102 128 chr5 19840229 19840256 -179789894 + MSTA LTR MaLR 179 205 -223 2119 105 0 3 chr5 19840256 19840552 -179789598 + AluSx SINE Alu 1 295 -17 1746 130 102 128 chr5 19840552 19840720 -179789430 + MSTA LTR MaLR 205 362 -66 2215 100 0 7 chr5 19840720 19841029 -179789121 + AluSx SINE Alu 1 307 -5 1746 130 102 128 chr5 19841029 19841095 -179789055 + MSTA LTR MaLR 362 428 0 453 243 77 163 chr5 19841095 19841208 -179788942 + L2 LINE L2 3225 3270 -43 2409 52 0 10 chr5 19841239 19841547 -179788603 + AluY SINE Alu 1 305 -6 311 363 0 0 chr5 19841651 19841742 -179788408 + L1MC4 LINE L1 6613 6703 -1339 388 159 14 14 chr5 19841771 19841840 -179788310 - FRAM SINE Alu -29 137 69 1215 114 0 47 chr5 19842828 19843064 -179787086 - AluSx SINE Alu -87 225 1 247 293 25 83 chr5 19843095 19843134 -179787016 - MIR SINE MIR -32 230 190 2452 52 0 3 chr5 19843134 19843443 -179786707 - AluY SINE Alu -3 308 1 247 293 25 83 chr5 19843443 19843560 -179786590 - MIR SINE MIR -72 190 83 349 250 235 50 chr5 19843632 19843832 -179786318 + MIR SINE MIR 20 256 -6 1204 179 93 7 chr5 19843835 19844115 -179786035 + AluJo SINE Alu 1 304 -8 28 0 0 0 chr5 19844811 19844839 -179785311 + AT_rich Low_complexity Low_complexity 1 28 0 1807 124 7 0 chr5 19845016 19845291 -179784859 + AluSx SINE Alu 34 310 -2 1538 151 134 35 chr5 19845312 19845387 -179784763 + L1MD3 LINE L1 6264 6330 -1665 2116 100 28 0 chr5 19845387 19845678 -179784472 + AluSc SINE Alu 1 299 -10 1538 151 134 35 chr5 19845678 19845963 -179784187 + L1MD3 LINE L1 6330 7995 0 300 300 53 53 chr5 19846072 19846242 -179783908 + L1MEd LINE L1 307 476 -5643 1582 178 0 4 chr5 19846271 19846552 -179783598 - AluJo SINE Alu -12 300 21 1810 172 0 104 chr5 19846600 19846786 -179783364 + MLT1B LTR MaLR 1 118 -272 2022 130 0 0 chr5 19846786 19847079 -179783071 + AluSg SINE Alu 1 293 -17 1810 172 0 104 chr5 19847079 19847323 -179782827 + MLT1B LTR MaLR 118 386 -4 21 36 0 0 chr5 19847364 19847392 -179782758 + AT_rich Low_complexity Low_complexity 1 28 0 251 192 121 61 chr5 19847496 19847595 -179782555 - MLT1J LTR MaLR -33 478 374 595 277 55 82 chr5 19847629 19847788 -179782362 - L2 LINE L2 -1459 1855 1708 1987 118 3 3 chr5 19847788 19848085 -179782065 + AluSx SINE Alu 1 297 -15 595 277 55 82 chr5 19848085 19848253 -179781897 - L2 LINE L2 -1606 1708 1537 253 231 0 0 chr5 19848307 19848359 -179781791 + LTR30 LTR ERV1 1 52 -670 2550 131 81 2 chr5 19848359 19848756 -179781394 + LTR12 LTR ERV1 53 480 -234 559 272 125 66 chr5 19848795 19849024 -179781126 + MER69 DNA AcHobo 32 246 -980 2037 152 75 15 chr5 19849024 19849413 -179780737 - MLT2D LTR ERVL 0 414 3 1868 141 10 0 chr5 19849414 19849704 -179780446 + AluJb SINE Alu 1 293 -19 559 272 125 66 chr5 19849704 19849746 -179780404 + MER69 DNA AcHobo 246 284 -942 1940 89 0 41 chr5 19849746 19850081 -179780069 - AluSg SINE Alu 0 323 1 1560 191 0 10 chr5 19850086 19850380 -179779770 - AluJb SINE Alu -21 291 1 559 272 125 66 chr5 19850380 19850506 -179779644 + MER69 DNA AcHobo 287 463 -763 686 126 0 0 chr5 19850516 19850611 -179779539 + AluJb SINE Alu 201 295 -17 2178 98 7 0 chr5 19850611 19850917 -179779233 + AluSc SINE Alu 1 308 -1 2459 39 3 26 chr5 19850969 19851279 -179778871 + AluY SINE Alu 1 303 -8 23 33 0 0 chr5 19851280 19851310 -179778840 + AT_rich Low_complexity Low_complexity 1 30 0 1619 207 139 20 chr5 19851391 19851850 -179778300 + MER69 DNA AcHobo 2010 2523 -3 1915 143 27 0 chr5 19851978 19852279 -179777871 - AluJb SINE Alu -3 309 1 595 135 0 29 chr5 19852450 19852554 -179777596 + MER53 DNA DNA 1 101 -88 2286 74 3 3 chr5 19852584 19852883 -179777267 - AluSg SINE Alu -10 300 2 32 0 0 0 chr5 19853089 19853121 -179777029 + AT_rich Low_complexity Low_complexity 1 32 0 1890 107 50 0 chr5 19853126 19853406 -179776744 + AluSg SINE Alu 3 296 -14 713 130 0 0 chr5 19853444 19853544 -179776606 - AluJ/FLAM SINE Alu -211 101 2 2490 194 104 75 chr5 19853789 19854415 -179775735 + MER45B DNA AcHobo 1 607 -433 2179 123 39 28 chr5 19854415 19854773 -179775377 + THE1B LTR MaLR 1 362 -2 2490 194 104 75 chr5 19854773 19854803 -179775347 + MER45B DNA AcHobo 607 635 -405 1443 208 7 10 chr5 19854803 19855092 -179775058 - AluJo SINE Alu -24 288 1 2490 194 104 75 chr5 19855092 19855191 -179774959 + MER45B DNA AcHobo 635 779 -261 239 93 70 0 chr5 19855199 19855242 -179774908 + MER45B DNA AcHobo 734 779 -261 357 109 0 0 chr5 19855242 19855297 -179774853 + (TTCCC)n Simple_repeat Simple_repeat 4 58 0 1539 97 0 0 chr5 19855298 19855505 -179774645 - AluSq SINE Alu -95 218 12 574 110 0 44 chr5 19855563 19855654 -179774496 + AluSc SINE Alu 210 296 -13 939 66 0 0 chr5 19855666 19855787 -179774363 - AluY SINE Alu -16 295 175 1039 183 10 14 chr5 19855787 19855995 -179774155 + MER45B DNA AcHobo 834 1040 0 389 273 67 62 chr5 19857128 19857176 -179772974 - MIR SINE MIR -11 251 205 2186 105 0 0 chr5 19857176 19857471 -179772679 - AluSg SINE Alu -14 296 2 2198 89 0 10 chr5 19857473 19857775 -179772375 - AluSg SINE Alu -11 299 1 389 273 67 62 chr5 19857775 19857917 -179772233 - MIR SINE MIR -57 205 57 201 373 0 15 chr5 19857960 19858027 -179772123 - MIR SINE MIR -194 68 3 720 186 8 0 chr5 19858097 19858221 -179771929 + FLAM_C SINE Alu 2 126 -17 1815 148 33 0 chr5 19858274 19858577 -179771573 - AluSp SINE Alu 0 313 1 2325 68 0 3 chr5 19858678 19858985 -179771165 - AluSg SINE Alu -4 306 1 183 374 86 16 chr5 19859020 19859207 -179770943 - L3 LINE CR1 -1164 413 214 1467 203 0 7 chr5 19859247 19859543 -179770607 + AluSx SINE Alu 1 294 -18 939 108 51 6 chr5 19859548 19859705 -179770445 - AluY SINE Alu -19 292 129 2136 70 13 46 chr5 19860093 19860395 -179769755 + AluY SINE Alu 1 292 -19 1467 203 0 7 chr5 19860400 19860696 -179769454 - AluSx SINE Alu -18 294 1 183 374 86 16 chr5 19860736 19860923 -179769227 + L3 LINE CR1 214 413 -1164 2065 114 0 3 chr5 19860958 19861256 -179768894 + AluSg SINE Alu 1 297 -13 379 133 0 0 chr5 19861424 19861489 -179768661 + Alu SINE Alu 1 46 -255 2239 75 3 36 chr5 19861516 19861823 -179768327 + AluSp SINE Alu 1 297 -16 1877 108 32 4 chr5 19861835 19862114 -179768036 + AluSc SINE Alu 1 287 -22 632 197 210 108 chr5 19862137 19862508 -179767642 - MLT1I LTR MaLR 0 409 1 265 330 21 10 chr5 19862522 19862619 -179767531 + L3 LINE CR1 885 982 -595 975 179 31 20 chr5 19862632 19862827 -179767323 + MLT1D LTR MaLR 1 197 -308 947 153 7 0 chr5 19862858 19863008 -179767142 + MLT1D LTR MaLR 355 505 0 1509 164 54 11 chr5 19863013 19863293 -179766857 - AluJo SINE Alu -20 292 1 2109 102 14 0 chr5 19863323 19863618 -179766532 + AluSp SINE Alu 1 299 -14 533 298 193 12 chr5 19863670 19863996 -179766154 + L3 LINE CR1 1169 1553 -24 2541 3 0 0 chr5 19864340 19864653 -179765497 - AluY SINE Alu 0 313 1 688 170 7 64 chr5 19864687 19864828 -179765322 - FLAM_C SINE Alu 0 133 1 1614 108 0 0 chr5 19865009 19865232 -179764918 - AluSq SINE Alu -90 223 1 259 43 22 22 chr5 19865244 19865290 -179764860 + (CA)n Simple_repeat Simple_repeat 1 46 0 2022 104 7 14 chr5 19865293 19865582 -179764568 - AluSg SINE Alu -23 287 1 220 121 0 0 chr5 19865726 19865759 -179764391 - MER5A DNA MER1_type -19 170 138 1585 143 14 29 chr5 19865973 19866253 -179763897 - AluJo SINE Alu -36 276 1 392 275 93 103 chr5 19866280 19866571 -179763579 + L2 LINE L2 2183 2470 -844 1661 144 4 0 chr5 19866782 19867038 -179763112 - AluSx SINE Alu -18 294 38 655 131 49 33 chr5 19867290 19867412 -179762738 + MLT1A1 LTR MaLR 1 124 -241 612 161 18 17 chr5 19867423 19867540 -179762610 + MLT1A1 LTR MaLR 250 354 -11 1920 139 0 0 chr5 19867542 19867855 -179762295 + AluSx SINE Alu 1 313 0 1515 176 10 17 chr5 19867972 19868273 -179761877 + AluJo SINE Alu 1 299 -13 243 265 161 108 chr5 19869084 19869151 -179760999 - MIR SINE MIR 0 262 200 2290 78 0 10 chr5 19869151 19869460 -179760690 - AluY SINE Alu -5 306 1 243 265 161 108 chr5 19869460 19869488 -179760662 - MIR SINE MIR -62 200 175 2341 77 0 6 chr5 19869488 19869801 -179760349 - AluY SINE Alu 0 311 1 243 265 161 108 chr5 19869801 19869953 -179760197 - MIR SINE MIR -87 175 1 268 330 88 21 chr5 19870185 19870424 -179759726 + HAL1b LINE L1 89 343 -1005 253 133 50 17 chr5 19870448 19870508 -179759642 + CT-rich Low_complexity Low_complexity 2 63 0 297 197 0 0 chr5 19870588 19870649 -179759501 + CT-rich Low_complexity Low_complexity 1 61 0 898 185 0 22 chr5 19870649 19870827 -179759323 - AluJb SINE Alu -6 306 133 2184 94 3 3 chr5 19870836 19871144 -179759006 - AluY SINE Alu -3 308 1 482 217 80 7 chr5 19871155 19871293 -179758857 + HAL1b LINE L1 419 566 -782 289 167 30 121 chr5 19871303 19871359 -179758791 + HAL1b LINE L1 694 753 -595 1625 151 19 45 chr5 19871359 19871497 -179758653 + AluSx SINE Alu 1 141 -171 2485 56 0 0 chr5 19871497 19871802 -179758348 + AluY SINE Alu 1 305 -6 1625 151 19 45 chr5 19871802 19871974 -179758176 + AluSx SINE Alu 141 303 -9 289 167 30 121 chr5 19871974 19872049 -179758101 + HAL1b LINE L1 753 813 -535 482 270 72 69 chr5 19872065 19872300 -179757850 + HAL1b LINE L1 1029 1267 -81 2295 70 0 20 chr5 19872300 19872600 -179757550 - AluY SINE Alu -17 294 1 482 270 72 69 chr5 19872600 19872682 -179757468 + HAL1b LINE L1 1267 1347 -1 1694 183 0 3 chr5 19872693 19873004 -179757146 + AluJo SINE Alu 1 310 -2 340 137 0 0 chr5 19873124 19873175 -179756975 + MER4E LTR ERV1 650 700 -66 309 89 0 0 chr5 19873177 19873222 -179756928 + (A)n Simple_repeat Simple_repeat 1 45 0 2488 33 0 13 chr5 19873443 19873743 -179756407 + AluY SINE Alu 1 296 -15 2090 109 3 0 chr5 19873950 19874253 -179755897 + AluSx SINE Alu 1 304 -8 414 0 0 0 chr5 19874400 19874446 -179755704 + (TG)n Simple_repeat Simple_repeat 2 47 0 1875 128 0 20 chr5 19874451 19874755 -179755395 - AluJb SINE Alu -14 298 1 823 0 63 0 chr5 19874830 19874957 -179755193 + (TA)n Simple_repeat Simple_repeat 2 136 0 2077 80 0 28 chr5 19875632 19875920 -179754230 + AluSc SINE Alu 16 295 -14 227 320 86 23 chr5 19876025 19876153 -179753997 - MER5A DNA MER1_type -7 182 47 * 303 324 38 9 chr5 19876049 19876154 -179753996 + MER5A DNA MER1_type 47 154 -35 304 271 226 0 chr5 19876249 19876382 -179753768 - MER5A DNA MER1_type -13 176 14 1713 141 20 17 chr5 19876413 19876710 -179753440 + AluSx SINE Alu 1 298 -14 5367 84 95 4 chr5 19876948 19877705 -179752445 - LTR12 LTR ERV1 0 826 1 779 267 20 0 chr5 19878357 19878552 -179751598 + MER58A DNA MER1_type 26 224 0 1624 187 0 3 chr5 19878834 19879123 -179751027 + AluJb SINE Alu 5 292 -20 230 132 19 0 chr5 19879123 19879176 -179750974 + (TA)n Simple_repeat Simple_repeat 1 54 0 317 294 42 34 chr5 19879380 19879499 -179750651 + MIR SINE MIR 84 203 -59 1801 162 0 22 chr5 19880248 19880562 -179749588 + AluJb SINE Alu 1 307 -5 198 0 0 0 chr5 19881456 19881478 -179748672 + (TG)n Simple_repeat Simple_repeat 1 22 0 2215 50 0 4 chr5 19881478 19881757 -179748393 - AluY SINE Alu -33 278 1 1088 214 13 17 chr5 19881955 19882193 -179747957 + MIR SINE MIR 1 237 -25 389 215 0 0 chr5 19882195 19882260 -179747890 + MER2 DNA MER2_type 1 65 -280 * 637 127 85 42 chr5 19882255 19882373 -179747777 + MER2 DNA MER2_type 223 345 0 200 293 181 17 chr5 19883151 19883267 -179746883 - MIR SINE MIR -15 247 113 2246 78 3 0 chr5 19883494 19883810 -179746340 + AluSp SINE Alu 1 317 0 252 210 16 48 chr5 19884839 19884901 -179745249 - L2 LINE L2 -18 3295 3236 1444 137 125 0 chr5 19885308 19885564 -179744586 - AluJb SINE Alu -24 288 1 916 205 95 0 chr5 19885658 19885858 -179744292 + MER20 DNA MER1_type 1 219 0 195 281 37 37 chr5 19886482 19886564 -179743586 + MIR3 SINE MIR 93 174 -34 30 0 0 0 chr5 19887973 19888003 -179742147 + GC_rich Low_complexity Low_complexity 1 30 0 279 217 0 89 chr5 19888806 19888963 -179741187 + (CCCCG)n Simple_repeat Simple_repeat 1 143 0 203 159 0 101 chr5 19889862 19889931 -179740219 + L2 LINE L2 2989 3050 -222 932 146 35 12 chr5 19890547 19890718 -179739432 + L1MC2 LINE L1 6168 6342 -2 407 242 117 62 chr5 19893115 19893243 -179736907 + MER45A DNA AcHobo 1 107 -71 1258 142 20 32 chr5 19893283 19893536 -179736614 + L1MA3 LINE L1 6056 6305 0 1364 59 71 0 chr5 19893547 19893717 -179736433 + AluY SINE Alu 2 183 -128 2287 66 0 11 chr5 19893723 19894009 -179736141 - AluY SINE Alu -28 283 1 2211 118 0 3 chr5 19894017 19894322 -179735828 - AluSq SINE Alu -9 304 1 646 159 0 19 chr5 19894350 19894457 -179735693 - U6 snRNA snRNA -2 105 1 619 204 0 0 chr5 19894481 19894589 -179735561 - FRAM SINE Alu -61 115 8 2314 106 0 10 chr5 19894603 19894914 -179735236 - AluSx SINE Alu -4 308 1 403 206 0 0 chr5 19894917 19894990 -179735160 + MER45A DNA AcHobo 102 174 -4 1675 153 42 39 chr5 19895221 19895529 -179734621 + AluJo SINE Alu 1 309 -3 200 151 0 38 chr5 19895968 19896021 -179734129 + A-rich Low_complexity Low_complexity 3 53 0 1937 103 14 14 chr5 19896316 19896597 -179733553 + AluSq SINE Alu 1 281 -32 1155 36 0 0 chr5 19896597 19896737 -179733413 + (GGAA)n Simple_repeat Simple_repeat 4 143 0 2464 58 0 19 chr5 19896891 19897202 -179732948 + AluY SINE Alu 1 305 -6 929 133 0 0 chr5 19897206 19897334 -179732816 - FLAM_C SINE Alu -10 133 6 1544 208 0 3 chr5 19897506 19897790 -179732360 + AluJo SINE Alu 17 299 -13 1466 158 43 84 chr5 19897792 19898114 -179732036 + AluJb SINE Alu 1 309 -3 1118 156 0 0 chr5 19898136 19898309 -179731841 + AluSg/x SINE Alu 135 307 -3 545 203 0 120 chr5 19898318 19898451 -179731699 - FLAM_A SINE Alu -12 121 5 2164 126 7 7 chr5 19898571 19898881 -179731269 + AluSx SINE Alu 1 310 -2 1376 187 79 4 chr5 19899195 19899313 -179730837 + Tigger7 DNA MER2_type 2288 2396 -191 2424 92 0 0 chr5 19899313 19899617 -179730533 - AluSx SINE Alu -8 304 1 1376 187 79 4 chr5 19899617 19899776 -179730374 + Tigger7 DNA MER2_type 2396 2586 -1 1515 66 0 11 chr5 19900357 19900538 -179729612 + AluY SINE Alu 1 179 -132 672 60 0 0 chr5 19900538 19900621 -179729529 + AluY SINE Alu 218 300 -11 1790 159 3 20 chr5 19900974 19901275 -179728875 - AluJo SINE Alu -11 301 6 1752 178 13 3 chr5 19901859 19902163 -179727987 - AluJb SINE Alu -5 307 1 1709 120 11 34 chr5 19902385 19902651 -179727499 + AluSq SINE Alu 1 260 -53 935 199 26 60 chr5 19902751 19902831 -179727319 + L1MC3 LINE L1 6790 6871 -914 2449 59 13 23 chr5 19902831 19903137 -179727013 + AluY SINE Alu 1 303 -8 935 199 26 60 chr5 19903137 19903322 -179726828 + L1MC3 LINE L1 6871 7046 -739 347 237 6 0 chr5 19903340 19903496 -179726654 + (TAGA)n Simple_repeat Simple_repeat 4 160 0 180 228 0 0 chr5 19903533 19903590 -179726560 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 403 155 48 128 chr5 19903594 19903765 -179726385 + L1MC1 LINE L1 6132 6315 -1454 2219 113 0 20 chr5 19903765 19904066 -179726084 + AluSg SINE Alu 1 295 -15 403 155 48 128 chr5 19904066 19904721 -179725429 + L1MC1 LINE L1 6315 7021 -748 2308 98 0 3 chr5 19904721 19905018 -179725132 - AluSq SINE Alu -17 296 1 403 155 48 128 chr5 19905018 19905038 -179725112 + L1MC1 LINE L1 7021 7769 0 194 301 157 12 chr5 19905421 19905504 -179724646 + MIR3 SINE MIR 83 177 -31 2201 95 14 0 chr5 19905508 19905793 -179724357 - AluSx SINE Alu -23 289 1 2326 77 0 45 chr5 19906039 19906349 -179723801 - AluY SINE Alu -15 296 1 185 56 0 56 chr5 19906398 19906434 -179723716 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 1087 192 63 120 chr5 19906592 19906952 -179723198 + LTR52 LTR ERVL 1 333 -88 1705 119 55 0 chr5 19906952 19907187 -179722963 + AluSx SINE Alu 33 280 -32 1087 192 63 120 chr5 19907187 19907269 -179722881 + LTR52 LTR ERVL 333 418 -3 2443 89 0 6 chr5 19908771 19909085 -179721065 - AluSq SINE Alu -1 312 1 21 0 0 0 chr5 19909476 19909497 -179720653 + AT_rich Low_complexity Low_complexity 1 21 0 1465 113 34 0 chr5 19909638 19909842 -179720308 + AluSg/x SINE Alu 96 306 -6 1181 248 77 57 chr5 19909887 19910307 -179719843 + L1MC5 LINE L1 7077 7516 -445 1632 157 44 31 chr5 19910307 19910600 -179719550 + AluJo SINE Alu 2 298 -14 1181 248 77 57 chr5 19910600 19910832 -179719318 + L1MC5 LINE L1 7516 7742 -219 625 275 59 13 chr5 19911302 19911538 -179718612 - MIR SINE MIR -1 261 15 2051 146 0 0 chr5 19911797 19912098 -179718052 - AluSx SINE Alu -3 309 9 665 170 64 38 chr5 19912796 19912987 -179717163 - L1MB3 LINE L1 -71 6103 5914 2276 67 42 0 chr5 19912988 19913272 -179716878 + AluY SINE Alu 1 296 -15 1654 142 40 0 chr5 19913394 19913641 -179716509 - AluSq SINE Alu -56 257 1 2376 94 0 3 chr5 19913641 19913948 -179716202 - AluSc SINE Alu -3 306 1 1971 143 6 22 chr5 19914081 19914395 -179715755 + AluJo SINE Alu 1 309 -3 2529 53 0 7 chr5 19914582 19914886 -179715264 - AluY SINE Alu -9 302 1 2318 91 3 58 chr5 19915287 19915517 -179714633 - L1PB1 LINE L1 0 6151 5947 2493 63 0 0 chr5 19915517 19915816 -179714334 - AluY SINE Alu -10 301 3 2318 91 3 58 chr5 19915816 19915948 -179714202 - L1PB1 LINE L1 -204 5947 5809 1312 157 0 5 chr5 19916027 19916231 -179713919 + AluJo SINE Alu 86 288 -24 1785 148 56 3 chr5 19918114 19918398 -179711752 - AluJo SINE Alu -13 299 1 2252 120 7 0 chr5 19918409 19918717 -179711433 - AluSx SINE Alu -2 310 1 212 309 0 56 chr5 19918946 19919072 -179711078 + CT-rich Low_complexity Low_complexity 4 122 0 2473 84 3 3 chr5 19919334 19919643 -179710507 + AluSx SINE Alu 1 309 -3 2060 97 57 17 chr5 19920451 19920750 -179709400 - AluSq SINE Alu -2 311 1 413 56 0 0 chr5 19920900 19920954 -179709196 - AluSp SINE Alu -17 296 243 894 191 4 49 chr5 19920954 19921179 -179708971 + pTR5 LTR ERV1 743 957 -1481 3781 126 40 30 chr5 19921279 19921940 -179708210 + pTR5 LTR ERV1 366 1019 -1419 1993 90 4 0 chr5 19921940 19922185 -179707965 - AluSp SINE Alu -67 246 1 2019 84 3 25 chr5 19922317 19922601 -179707549 + AluY SINE Alu 1 278 -33 198 0 0 0 chr5 19922601 19922623 -179707527 + (CA)n Simple_repeat Simple_repeat 1 22 0 1917 162 0 22 chr5 19923517 19923831 -179706319 - AluJb SINE Alu -5 307 1 269 294 42 34 chr5 19924580 19924699 -179705451 - MIR SINE MIR -59 203 84 211 130 37 0 chr5 19924903 19924957 -179705193 + (TA)n Simple_repeat Simple_repeat 1 56 0 1736 187 0 3 chr5 19924957 19925246 -179704904 - AluJb SINE Alu -20 292 5 707 228 41 0 chr5 19925527 19925698 -179704452 - MER58A DNA MER1_type 0 224 47 1549 182 12 49 chr5 19976186 19976510 -179653640 - AluJb SINE Alu 0 312 1 221 95 0 48 chr5 19976518 19976560 -179653590 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 2045 117 17 3 chr5 19976571 19976862 -179653288 - AluSx SINE Alu -17 295 1 455 92 0 0 chr5 19977107 19977172 -179652978 + MER41B LTR ERV1 483 547 -88 231 211 132 13 chr5 19977292 19977368 -179652782 - L2 LINE L2 -1 3312 3228 2160 104 0 3 chr5 19977376 19977664 -179652486 - AluSx SINE Alu -12 300 14 631 242 163 8 chr5 19977771 19978108 -179652042 - L2 LINE L2 -249 3064 2673 442 261 78 58 chr5 19978680 19978937 -179651213 - MIR SINE MIR 0 262 1 2370 101 0 0 chr5 19979137 19979443 -179650707 - AluY SINE Alu -5 306 1 2319 104 3 0 chr5 19979889 19980197 -179649953 - AluSp SINE Alu -2 311 3 2127 133 0 3 chr5 19980197 19980497 -179649653 - AluJb SINE Alu -11 301 3 27 29 0 0 chr5 19980505 19980539 -179649611 + AT_rich Low_complexity Low_complexity 1 34 0 2270 104 7 3 chr5 19980957 19981256 -179648894 + AluSp SINE Alu 1 300 -13 2185 115 3 0 chr5 19981426 19981721 -179648429 - AluSx SINE Alu -16 296 1 29 0 0 0 chr5 19981929 19981958 -179648192 + AT_rich Low_complexity Low_complexity 1 29 0 29 70 0 0 chr5 19982007 19982064 -179648086 + AT_rich Low_complexity Low_complexity 1 57 0 947 87 109 0 chr5 19982240 19982378 -179647772 + AluSc SINE Alu 150 302 -7 22 35 0 0 chr5 19982704 19982733 -179647417 + AT_rich Low_complexity Low_complexity 1 29 0 257 188 31 0 chr5 19983667 19983731 -179646419 + CT-rich Low_complexity Low_complexity 3 68 0 2289 104 7 3 chr5 19983731 19984040 -179646110 - AluSx SINE Alu -2 310 1 277 211 0 0 chr5 19984498 19984550 -179645600 + LTR30 LTR ERV1 1 52 -670 1258 105 4 81 chr5 19984550 19984776 -179645374 + LTR12 LTR ERV1 94 284 -430 397 238 10 0 chr5 19984776 19984877 -179645273 + LTR30 LTR ERV1 552 653 -69 618 141 0 0 chr5 19984877 19984969 -179645181 + LTR12 LTR ERV1 623 714 0 957 192 0 6 chr5 19985061 19985228 -179644922 + FRAM SINE Alu 1 166 -10 2173 127 0 7 chr5 19985286 19985586 -179644564 + AluSq SINE Alu 1 298 -15 333 232 0 24 chr5 19986265 19986347 -179643803 - MIR3 SINE MIR -28 180 101 1220 183 46 13 chr5 19987167 19987463 -179642687 - LTR54 LTR ERV1 0 510 177 403 160 53 0 chr5 19987463 19987538 -179642612 - AluSc SINE Alu -143 166 88 361 240 41 25 chr5 19987538 19987659 -179642491 - LTR54B LTR ERV1 -375 123 1 1829 140 3 44 chr5 19988607 19988922 -179641228 + AluSx SINE Alu 1 302 -10 2308 91 0 0 chr5 19988959 19989268 -179640882 + AluY SINE Alu 1 309 -2 1953 125 3 16 chr5 19989363 19989666 -179640484 + AluSx SINE Alu 1 299 -13 822 83 18 0 chr5 19989737 19989846 -179640304 - HY1 scRNA scRNA -1 111 1 2147 114 0 3 chr5 19990333 19990639 -179639511 - AluSx SINE Alu -7 305 1 211 270 0 40 chr5 19991203 19991277 -179638873 + A-rich Low_complexity Low_complexity 4 74 0 2175 59 28 59 chr5 19991340 19991661 -179638489 + AluY SINE Alu 1 311 0 2069 94 3 24 chr5 19991726 19992024 -179638126 + AluSg SINE Alu 1 292 -18 447 284 80 12 chr5 19992921 19993083 -179637067 - MIR SINE MIR -22 240 68 242 325 51 38 chr5 19993153 19993310 -179636840 - L2 LINE L2 -613 2701 2543 1857 94 18 22 chr5 19993322 19993425 -179636725 + AluSq SINE Alu 33 135 -178 2218 75 0 0 chr5 19993425 19993740 -179636410 + AluY SINE Alu 1 315 0 1857 94 18 22 chr5 19993740 19993910 -179636240 + AluSq SINE Alu 135 307 -6 292 260 80 114 chr5 19994150 19994527 -179635623 + LTR16A1 LTR ERVL 2 365 -92 1875 146 37 89 chr5 19994528 19994872 -179635278 + MLT1B LTR MaLR 3 324 -66 1918 98 24 14 chr5 19994872 19995182 -179634968 - AluY SINE Alu 0 311 1 1875 146 37 89 chr5 19995182 19995241 -179634909 + MLT1B LTR MaLR 324 385 -5 460 220 0 10 chr5 19995245 19995345 -179634805 + LTR16A1 LTR ERVL 359 457 0 248 362 39 16 chr5 19995779 19995840 -179634310 + MIR3 SINE MIR 3 61 -147 1923 103 187 27 chr5 19995840 19996209 -179633941 - MSTA LTR MaLR 0 428 1 248 362 39 16 chr5 19996209 19996274 -179633876 + MIR3 SINE MIR 61 132 -76 180 97 0 0 chr5 19996292 19996323 -179633827 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 802 121 17 29 chr5 19996957 19997130 -179633020 + CT-rich Low_complexity Low_complexity 2 172 0 2105 120 0 3 chr5 19997132 19997441 -179632709 - AluSg SINE Alu -2 308 1 2130 97 3 3 chr5 19997617 19997906 -179632244 - AluSc SINE Alu -19 290 2 199 350 87 39 chr5 19997988 19998091 -179632059 + L2 LINE L2 3188 3295 -18 207 278 103 21 chr5 19998206 19998303 -179631847 + L2 LINE L2 3209 3313 0 2011 96 48 3 chr5 19998421 19998712 -179631438 - AluSg SINE Alu -6 304 1 1117 188 38 8 chr5 19998901 19999141 -179631009 + L1ME2 LINE L1 5910 6156 -8 253 355 58 25 chr5 19999406 19999527 -179630623 - MIR3 SINE MIR -78 130 6 430 146 45 0 chr5 19999528 19999638 -179630512 + CT-rich Low_complexity Low_complexity 1 115 0 2018 122 0 3 chr5 19999638 19999924 -179630226 - AluSx SINE Alu -27 285 1 340 303 97 14 chr5 19999976 20000121 -179630029 + MIR SINE MIR 40 196 -66 1853 128 3 3 chr5 20000930 20001254 -179628896 + AluJo SINE Alu 1 324 0 1547 142 4 18 chr5 20002175 20002450 -179627700 - AluJo SINE Alu -11 301 31 5254 81 135 7 chr5 20002450 20003182 -179626968 - LTR12 LTR ERV1 0 826 1 225 176 0 0 chr5 20003182 20003216 -179626934 - AluJo SINE Alu -266 34 1 22 0 0 0 chr5 20003727 20003749 -179626401 + AT_rich Low_complexity Low_complexity 1 22 0 1810 138 7 43 chr5 20004432 20004736 -179625414 + AluJb SINE Alu 1 293 -19 1820 217 127 55 chr5 20005476 20005695 -179624455 - L1MD2 LINE L1 0 6359 6157 189 0 0 0 chr5 20005695 20005716 -179624434 + (TG)n Simple_repeat Simple_repeat 2 22 0 1820 217 127 55 chr5 20005716 20005787 -179624363 - L1MD2 LINE L1 -202 6157 6093 1650 152 7 34 chr5 20005787 20006084 -179624066 + AluJo SINE Alu 1 289 -23 1820 217 127 55 chr5 20006084 20006403 -179623747 - L1MD2 LINE L1 -266 6093 5699 2169 116 3 0 chr5 20006403 20006705 -179623445 - AluSp SINE Alu -10 303 1 1820 217 127 55 chr5 20006705 20006729 -179623421 - L1MD2 LINE L1 -660 5699 5678 1752 145 0 7 chr5 20006856 20007145 -179623005 + AluSx SINE Alu 5 291 -21 22 0 0 0 chr5 20007151 20007173 -179622977 + AT_rich Low_complexity Low_complexity 1 22 0 1001 139 61 139 chr5 20007410 20007567 -179622583 + MER33 DNA MER1_type 8 125 -2460 1370 176 45 48 chr5 20007567 20007880 -179622270 + AluJo SINE Alu 1 312 0 1001 139 61 139 chr5 20007880 20008066 -179622084 + MER33 DNA MER1_type 125 324 0 226 316 0 0 chr5 20008071 20008128 -179622022 - MIR SINE MIR -131 131 75 1100 206 107 69 chr5 20008202 20008566 -179621584 - MSTD LTR MaLR -2 394 17 401 311 115 4 chr5 20008957 20009192 -179620958 - MIR SINE MIR 0 262 2 2243 101 0 3 chr5 20009380 20009688 -179620462 - AluSp SINE Alu -6 307 1 2395 62 0 0 chr5 20009699 20010003 -179620147 - AluY SINE Alu -7 304 1 2157 106 7 0 chr5 20010115 20010417 -179619733 - AluSx SINE Alu -8 304 1 812 215 29 17 chr5 20010564 20010736 -179619414 - MER58B DNA MER1_type 0 341 168 1975 103 48 0 chr5 20010787 20011079 -179619071 - AluSp SINE Alu -7 306 1 190 350 70 0 chr5 20011086 20011186 -179618964 - MIR SINE MIR -61 147 41 226 239 0 60 chr5 20011361 20011428 -179618722 - L1ME3A LINE L1 -143 6027 5965 569 288 37 12 chr5 20011795 20011958 -179618192 + MIR SINE MIR 77 243 -19 873 132 0 0 chr5 20012018 20012139 -179618011 - FLAM_C SINE Alu -22 121 1 195 338 13 60 chr5 20012143 20012294 -179617856 + L3 LINE CR1 638 781 -796 966 127 0 0 chr5 20012345 20012487 -179617663 + FLAM_C SINE Alu 1 142 -1 2314 84 3 0 chr5 20012500 20012799 -179617351 + AluSp SINE Alu 5 304 -9 903 38 0 0 chr5 20012810 20012916 -179617234 + AluY SINE Alu 1 106 -205 1198 173 0 41 chr5 20012916 20013159 -179616991 + pTR5 LTR ERV1 743 975 -1463 1488 51 0 30 chr5 20013170 20013367 -179616783 + AluY SINE Alu 107 297 -14 1276 150 165 49 chr5 20013421 20013748 -179616402 + MLT1A1 LTR MaLR 1 365 0 2126 102 7 3 chr5 20013759 20014063 -179616087 - AluSg SINE Alu -4 306 2 344 331 39 17 chr5 20014106 20014284 -179615866 + MIR SINE MIR 6 187 -75 531 333 59 13 chr5 20014554 20014860 -179615290 + L3b LINE CR1 1109 1428 -155 824 142 0 45 chr5 20014930 20015064 -179615086 + FLAM_C SINE Alu 2 129 -14 2139 104 0 25 chr5 20015073 20015389 -179614761 + AluY SINE Alu 1 308 -3 2201 100 7 0 chr5 20015974 20016273 -179613877 + AluSx SINE Alu 1 301 -11 627 202 0 0 chr5 20016373 20016477 -179613673 + MER58 DNA MER1_type 2 105 -2315 901 227 0 18 chr5 20016482 20016707 -179613443 + AluJb SINE Alu 87 307 -5 802 89 0 12 chr5 20016876 20016993 -179613157 - L1ME3A LINE L1 -525 5647 5552 189 0 0 0 chr5 20017126 20017147 -179613003 + (CAA)n Simple_repeat Simple_repeat 2 22 0 2025 98 4 0 chr5 20017633 20017949 -179612201 - AluSq SINE Alu 0 325 9 742 105 0 53 chr5 20018758 20018948 -179611202 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1837 136 0 0 chr5 20018978 20019250 -179610900 - AluSx SINE Alu -39 273 2 1486 185 33 0 chr5 20020358 20020634 -179609516 - AluJo SINE Alu -23 289 5 369 327 19 0 chr5 20020725 20020832 -179609318 - MER81 DNA DNA 0 114 6 397 102 0 220 chr5 20020929 20020976 -179609174 - L1MB2 LINE L1 -7 6164 6108 1896 177 24 0 chr5 20020976 20021315 -179608835 + MER7A DNA MER2_type 2 346 0 2056 118 14 0 chr5 20021316 20021613 -179608537 - AluSx SINE Alu 0 312 12 397 102 0 220 chr5 20021613 20021681 -179608469 - L1MB2 LINE L1 -62 6109 6073 209 308 13 26 chr5 20022137 20022215 -179607935 + L2 LINE L2 3237 3313 0 1788 170 3 6 chr5 20022258 20022570 -179607580 - AluJo SINE Alu -1 311 1 2037 116 24 0 chr5 20023103 20023397 -179606753 - AluSx SINE Alu -10 302 2 1667 158 29 4 chr5 20023420 20023698 -179606452 - AluJo SINE Alu -27 285 1 591 295 119 15 chr5 20023813 20024081 -179606069 - LTR16A LTR ERVL -53 397 102 260 263 0 0 chr5 20024336 20024393 -179605757 + GA-rich Low_complexity Low_complexity 2 58 0 215 332 68 58 chr5 20024898 20025103 -179605047 + L2 LINE L2 365 571 -2743 2390 66 0 7 chr5 20025243 20025548 -179604602 + AluY SINE Alu 1 303 -8 1027 260 89 9 chr5 20025653 20025968 -179604182 - LTR16C LTR ERVL 0 491 152 2300 101 0 0 chr5 20025993 20026300 -179603850 + AluSq SINE Alu 1 307 -6 1042 340 113 37 chr5 20026963 20027959 -179602191 + L2 LINE L2 1904 2975 -339 202 295 36 62 chr5 20028154 20028266 -179601884 + L2 LINE L2 3125 3233 -80 1616 153 9 87 chr5 20028429 20028762 -179601388 - AluJo SINE Alu -5 307 1 540 122 98 0 chr5 20029120 20029202 -179600948 - 5S rRNA rRNA -31 90 1 192 256 0 0 chr5 20029376 20029415 -179600735 + L3b LINE CR1 1443 1481 -102 243 358 20 57 chr5 20029616 20029862 -179600288 + L2 LINE L2 2823 3059 -213 312 229 16 0 chr5 20029935 20029996 -179600154 + MER91B DNA MER1_type 1 62 -128 215 354 80 18 chr5 20030524 20030637 -179599513 + L2 LINE L2 3127 3246 -26 2323 52 10 0 chr5 20030766 20031057 -179599093 - AluSc SINE Alu -7 302 9 760 276 86 0 chr5 20031058 20031268 -179598882 - MIR SINE MIR -34 228 1 1674 185 3 0 chr5 20031425 20031742 -179598408 - AluJb SINE Alu 0 318 1 2156 101 0 0 chr5 20032362 20032650 -179597500 - AluSx SINE Alu -14 298 11 1503 188 0 21 chr5 20032717 20032999 -179597151 - AluJo SINE Alu -32 280 5 2363 75 0 3 chr5 20033229 20033536 -179596614 + AluSc SINE Alu 1 306 -3 1929 184 30 45 chr5 20033898 20034175 -179595975 - MLT1B LTR MaLR 0 390 110 2265 87 0 10 chr5 20034175 20034487 -179595663 - AluSc SINE Alu 0 309 1 1929 184 30 45 chr5 20034487 20034507 -179595643 - MLT1B LTR MaLR -280 110 91 2272 137 87 20 chr5 20034507 20034908 -179595242 - MSTA LTR MaLR 0 428 1 1929 184 30 45 chr5 20034908 20035005 -179595145 - MLT1B LTR MaLR -299 91 1 222 233 12 12 chr5 20035144 20035230 -179594920 + (TAA)n Simple_repeat Simple_repeat 2 87 0 1745 120 3 45 chr5 20035926 20036218 -179593932 - AluSx SINE Alu -19 293 14 1491 178 45 42 chr5 20037092 20037469 -179592681 - LTR37A LTR ERV1 -3 423 46 2174 89 0 3 chr5 20037779 20038070 -179592080 - AluSc SINE Alu 0 309 20 274 241 0 128 chr5 20038542 20038675 -179591475 - L1ME1 LINE L1 -18 6148 6033 2386 76 0 0 chr5 20038705 20039008 -179591142 - AluY SINE Alu -8 303 1 254 214 40 40 chr5 20039017 20039143 -179591007 + Charlie7 DNA MER1_type 2451 2576 -36 336 258 32 11 chr5 20040227 20040320 -179589830 + Charlie7 DNA MER1_type 2509 2603 -9 1931 116 13 26 chr5 20040734 20041037 -179589113 - AluSx SINE Alu -13 299 1 1792 158 7 3 chr5 20041069 20041361 -179588789 + AluJb SINE Alu 1 293 -19 2119 112 0 0 chr5 20042178 20042473 -179587677 + AluSx SINE Alu 1 295 -17 1891 125 0 23 chr5 20043128 20043433 -179586717 - AluSx SINE Alu -14 298 1 697 125 0 2 chr5 20043475 20043705 -179586445 + AluJb SINE Alu 12 295 -17 234 0 0 0 chr5 20043729 20043755 -179586395 + (CA)n Simple_repeat Simple_repeat 2 27 0 665 144 24 72 chr5 20043756 20043881 -179586269 - FLAM_C SINE Alu -23 120 2 1923 104 4 7 chr5 20043889 20044168 -179585982 - AluSc SINE Alu -2 307 30 810 250 71 98 chr5 20044309 20044852 -179585298 + L1MC4 LINE L1 6634 7142 -819 2294 217 32 62 chr5 20044885 20045431 -179584719 + L1ME1 LINE L1 5520 6044 -122 2016 108 3 3 chr5 20045431 20045717 -179584433 - AluSc SINE Alu -13 296 11 2294 217 32 62 chr5 20045717 20045834 -179584316 + L1ME1 LINE L1 6044 6163 -3 608 286 79 26 chr5 20045869 20046173 -179583977 + L1MC4a LINE L1 7110 7429 -379 2217 96 13 0 chr5 20046275 20046577 -179583573 + AluSc SINE Alu 3 308 -1 1197 108 6 0 chr5 20046623 20046789 -179583361 + AluSx SINE Alu 1 167 -145 240 208 62 0 chr5 20046817 20046865 -179583285 + L1MC4 LINE L1 7843 7893 -149 262 115 39 0 chr5 20046868 20046920 -179583230 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 333 262 78 19 chr5 20047013 20047116 -179583034 + MER5B DNA MER1_type 37 145 -33 891 213 105 35 chr5 20047150 20047436 -179582714 - MLT1G LTR MaLR -57 533 228 285 280 90 50 chr5 20047436 20047494 -179582656 - MER5A DNA MER1_type -8 181 116 2076 118 0 0 chr5 20047494 20047791 -179582359 + AluSx SINE Alu 1 297 -15 285 280 90 50 chr5 20047791 20047832 -179582318 - MER5A DNA MER1_type -73 116 78 2135 121 0 3 chr5 20048172 20048486 -179581664 - AluSq SINE Alu 0 313 1 2201 88 3 0 chr5 20049207 20049502 -179580648 - AluSx SINE Alu -16 296 1 836 240 13 69 chr5 20049610 20049843 -179580307 + MER58A DNA MER1_type 5 224 0 691 289 95 29 chr5 20050091 20050333 -179579817 + MIR SINE MIR 5 262 0 762 200 0 65 chr5 20050499 20050627 -179579523 + MER5A DNA MER1_type 2 120 -69 738 246 60 15 chr5 20050627 20050826 -179579324 + MER63A DNA MER1_type 3 210 0 762 200 0 65 chr5 20050826 20050852 -179579298 + MER5A DNA MER1_type 120 146 -43 260 282 127 0 chr5 20050912 20050983 -179579167 + MIR SINE MIR 21 100 -162 1945 100 14 11 chr5 20051410 20051711 -179578439 - AluSc SINE Alu 0 302 1 580 302 62 23 chr5 20051921 20052056 -179578094 + MLT1L LTR MaLR 10 138 -477 877 217 24 38 chr5 20052056 20052182 -179577968 + MER3 DNA MER1_type 1 127 -82 216 0 0 0 chr5 20052182 20052206 -179577944 + (TTTAA)n Simple_repeat Simple_repeat 4 27 0 1999 131 0 0 chr5 20052207 20052504 -179577646 - AluSx SINE Alu -15 297 1 877 217 24 38 chr5 20052504 20052587 -179577563 + MER3 DNA MER1_type 126 209 0 580 302 62 23 chr5 20052587 20052709 -179577441 + MLT1L LTR MaLR 138 277 -338 864 314 20 0 chr5 20052877 20053132 -179577018 - MIR SINE MIR -1 261 2 286 292 33 25 chr5 20053166 20053286 -179576864 + MLT1L LTR MaLR 494 614 -1 250 184 41 0 chr5 20054186 20054235 -179575915 - L2 LINE L2 -1 3312 3262 1808 148 7 3 chr5 20054256 20054546 -179575604 - AluSx SINE Alu -21 291 1 208 342 108 8 chr5 20054675 20054795 -179575355 - MIR SINE MIR -95 167 36 195 304 160 50 chr5 20055415 20055596 -179574554 - MIR SINE MIR -54 208 8 814 149 8 0 chr5 20055628 20055749 -179574401 - FLAM_A SINE Alu -11 122 1 202 341 12 47 chr5 20055763 20055848 -179574302 - MIR3 SINE MIR -34 174 93 201 39 0 0 chr5 20056031 20056057 -179574093 + (TG)n Simple_repeat Simple_repeat 1 26 0 246 156 0 52 chr5 20056460 20056473 -179573677 + A-rich Low_complexity Low_complexity 2 14 -60 953 167 12 24 chr5 20056473 20056641 -179573509 + FRAM SINE Alu 1 166 0 246 156 0 52 chr5 20056641 20056704 -179573446 + A-rich Low_complexity Low_complexity 14 74 0 1436 217 26 0 chr5 20057272 20057582 -179572568 - AluJo SINE Alu 0 318 1 253 154 0 46 chr5 20057619 20057684 -179572466 + CT-rich Low_complexity Low_complexity 2 63 0 279 190 0 0 chr5 20059023 20059081 -179571069 + (TG)n Simple_repeat Simple_repeat 1 58 0 578 315 75 4 chr5 20059082 20059323 -179570827 + MIR SINE MIR 4 261 -1 2192 95 7 0 chr5 20061110 20061415 -179568735 - AluSq SINE Alu -6 307 1 1491 198 113 19 chr5 20061435 20061859 -179568291 - MLT1C LTR MaLR -3 464 1 2196 107 0 0 chr5 20063707 20064005 -179566145 + AluSx SINE Alu 1 298 -14 422 289 75 46 chr5 20064491 20064664 -179565486 - L3b LINE CR1 -29 1554 1377 24 0 0 0 chr5 20065212 20065236 -179564914 + AT_rich Low_complexity Low_complexity 1 24 0 2136 93 3 7 chr5 20065236 20065525 -179564625 - AluSx SINE Alu -24 288 1 1157 257 118 22 chr5 20065809 20066268 -179563882 + MLT1D LTR MaLR 1 503 -2 2180 110 3 0 chr5 20066501 20066810 -179563340 - AluSg SINE Alu 0 310 1 425 82 33 0 chr5 20067240 20067301 -179562849 - AluJo SINE Alu -10 300 238 1657 178 39 43 chr5 20067318 20067734 -179562416 + pTR5 LTR ERV1 746 1159 -1279 2416 53 0 28 chr5 20068136 20068456 -179561694 - AluY SINE Alu 0 311 1 379 176 0 15 chr5 20068456 20068524 -179561626 - AluJo SINE Alu -2 300 234 2325 134 34 18 chr5 20068524 20068905 -179561245 - MER61D LTR ERV1 -1 500 114 1181 183 35 4 chr5 20068948 20069177 -179560973 - AluJo SINE Alu -76 236 1 238 242 32 32 chr5 20069309 20069371 -179560779 - MER5B DNA MER1_type 0 178 117 1656 146 47 23 chr5 20069444 20069745 -179560405 + AluJb SINE Alu 1 308 -4 335 274 21 21 chr5 20070221 20070316 -179559834 + MER5B DNA MER1_type 84 178 0 2323 73 0 19 chr5 20070483 20070800 -179559350 + AluY SINE Alu 1 311 0 1967 124 10 3 chr5 20070814 20071121 -179559029 + AluSc SINE Alu 1 309 0 545 221 24 80 chr5 20071156 20071369 -179558781 + MLT1B LTR MaLR 178 378 -12 348 235 73 89 chr5 20071669 20071708 -179558442 - L1MC4a LINE L1 -1445 6363 6325 2022 123 0 29 chr5 20071708 20072024 -179558126 - AluSq SINE Alu -6 307 1 348 235 73 89 chr5 20072024 20072439 -179557711 - L1MC4a LINE L1 -1483 6325 5943 2103 85 34 3 chr5 20072645 20072938 -179557212 + AluSq SINE Alu 2 303 -10 1286 201 37 40 chr5 20072938 20073237 -179556913 - AluJo SINE Alu 0 302 5 676 160 80 16 chr5 20073686 20073697 -179556453 - FLAM_C SINE Alu -169 133 124 225 0 0 0 chr5 20073697 20073722 -179556428 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 676 160 80 16 chr5 20073722 20073835 -179556315 - FLAM_C SINE Alu -178 124 1 416 203 14 0 chr5 20073856 20073930 -179556220 - MER58 DNA MER1_type -2 2418 2344 465 309 125 17 chr5 20074149 20074444 -179555706 + MLT1I LTR MaLR 64 390 -19 559 157 167 9 chr5 20074594 20074702 -179555448 - FLAM_C SINE Alu -8 125 1 1852 148 7 7 chr5 20074819 20075124 -179555026 + AluJb SINE Alu 1 305 -7 572 284 70 74 chr5 20075546 20075789 -179554361 - MIR SINE MIR 0 262 21 2254 86 3 0 chr5 20075957 20076261 -179553889 - AluSq SINE Alu -8 305 1 2392 78 3 0 chr5 20077287 20077594 -179552556 + AluY SINE Alu 1 308 -3 1799 166 0 10 chr5 20077800 20078113 -179552037 + AluJb SINE Alu 1 310 -2 1037 81 0 7 chr5 20078188 20078324 -179551826 + AluSq/x SINE Alu 1 135 -178 1911 119 14 0 chr5 20078324 20078610 -179551540 + AluSg SINE Alu 1 290 -20 204 286 107 45 chr5 20079382 20079431 -179550719 + L3 LINE CR1 1452 1497 -80 8198 57 4 6 chr5 20079431 20080440 -179549710 - LTR13 LTR ERVK 0 1007 1 204 286 107 45 chr5 20080440 20080502 -179549648 + L3 LINE CR1 1496 1570 -7 210 37 0 0 chr5 20080896 20080923 -179549227 + (TCTCTG)n Simple_repeat Simple_repeat 4 30 0 716 197 27 7 chr5 20081495 20081642 -179548508 + MER3 DNA MER1_type 17 166 -43 2002 132 13 10 chr5 20081778 20081953 -179548197 - AluSx SINE Alu 0 312 134 1907 108 54 0 chr5 20081953 20082230 -179547920 - AluSp SINE Alu -21 292 1 2002 132 13 10 chr5 20082230 20082365 -179547785 - AluSx SINE Alu -178 134 1 213 121 0 0 chr5 20082605 20082638 -179547512 + (TCCC)n Simple_repeat Simple_repeat 1 33 0 2053 97 0 7 chr5 20082638 20082927 -179547223 - AluSc SINE Alu -22 287 1 885 160 70 6 chr5 20083132 20083288 -179546862 + FRAM SINE Alu 1 166 0 355 327 64 26 chr5 20083310 20083466 -179546684 - MIR3 SINE MIR -43 165 4 216 67 0 0 chr5 20083563 20083593 -179546557 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2019 123 0 3 chr5 20083593 20083878 -179546272 - AluSx SINE Alu -28 284 1 1507 103 0 5 chr5 20083896 20084110 -179546040 - AluSg/x SINE Alu -15 295 83 544 244 118 0 chr5 20084209 20084344 -179545806 + MER58B DNA MER1_type 191 341 0 1267 186 35 17 chr5 20084369 20084627 -179545523 - MLT1D LTR MaLR 0 505 252 1752 147 3 11 chr5 20084627 20084948 -179545202 - AluJb SINE Alu 0 319 1 180 0 0 0 chr5 20084955 20084975 -179545175 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 863 128 0 0 chr5 20084988 20085113 -179545037 - FLAM_C SINE Alu -6 127 3 380 257 95 0 chr5 20086689 20086794 -179543356 - MIR SINE MIR 0 262 148 511 127 13 0 chr5 20086795 20086874 -179543276 - MADE1 DNA Mariner 0 80 1 549 222 0 0 chr5 20086874 20086982 -179543168 - MIR SINE MIR -111 151 44 1825 143 7 0 chr5 20087045 20087338 -179542812 - AluSq SINE Alu -14 299 5 352 278 0 52 chr5 20087539 20087654 -179542496 - L2 LINE L2 -9 3304 3196 363 291 97 84 chr5 20087701 20088250 -179541900 + L2 LINE L2 1442 1997 -1317 197 338 0 29 chr5 20088455 20088523 -179541627 + L2 LINE L2 3224 3289 -24 180 0 0 0 chr5 20088979 20088999 -179541151 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1989 122 3 0 chr5 20088999 20089285 -179540865 - AluSx SINE Alu -25 287 1 495 245 190 27 chr5 20089654 20089838 -179540312 + MER58C DNA MER1_type 2 215 0 2212 104 0 3 chr5 20090123 20090411 -179539739 + AluSq SINE Alu 1 287 -26 183 114 0 0 chr5 20090414 20090449 -179539701 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 1318 196 0 4 chr5 20090460 20090690 -179539460 + AluJo SINE Alu 1 229 -83 180 77 0 0 chr5 20090726 20090752 -179539398 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 812 248 73 100 chr5 20091103 20091646 -179538504 + L1MC4 LINE L1 6634 7142 -819 2333 217 32 60 chr5 20091679 20092224 -179537926 + L1ME1 LINE L1 5520 6044 -122 2125 109 3 3 chr5 20092224 20092509 -179537641 - AluSc SINE Alu -14 295 11 2333 217 32 60 chr5 20092509 20092626 -179537524 + L1ME1 LINE L1 6044 6163 -3 617 286 79 26 chr5 20092661 20092965 -179537185 + L1MC4a LINE L1 7110 7429 -379 2240 106 13 3 chr5 20093067 20093369 -179536781 + AluSc SINE Alu 3 307 -2 453 121 0 0 chr5 20093562 20093628 -179536522 - LTR7 LTR ERV1 -384 66 1 1450 132 23 39 chr5 20093632 20093684 -179536466 + MER4E-int LTR ERV1 6214 6265 -493 2605 66 0 0 chr5 20093684 20093989 -179536161 + AluY SINE Alu 1 305 -6 1450 132 23 39 chr5 20093989 20094296 -179535854 + MER4E-int LTR ERV1 6265 6608 -150 431 62 0 0 chr5 20094296 20094360 -179535790 - AluSp/q SINE Alu -7 306 243 2525 63 0 0 chr5 20094626 20094925 -179535225 + AluSc SINE Alu 1 299 -10 225 0 0 0 chr5 20095216 20095241 -179534909 + (T)n Simple_repeat Simple_repeat 1 25 0 4452 123 70 20 chr5 20095522 20096264 -179533886 + MER4E LTR ERV1 1 779 0 25 0 0 0 chr5 20096279 20096304 -179533846 + AT_rich Low_complexity Low_complexity 1 25 0 2383 81 3 0 chr5 20096304 20096600 -179533550 - AluY SINE Alu -14 297 1 860 128 0 30 chr5 20096605 20096738 -179533412 - FLAM_C SINE Alu -4 139 11 257 258 16 0 chr5 20098004 20098066 -179532084 - L1ME3A LINE L1 -98 6072 6010 540 238 146 31 chr5 20098186 20098434 -179531716 - L1ME3A LINE L1 -211 5951 5671 227 415 36 23 chr5 20098477 20098778 -179531372 + L3 LINE CR1 115 419 -1158 1752 81 0 5 chr5 20099035 20099257 -179530893 + AluSg/x SINE Alu 79 299 -11 406 168 117 97 chr5 20099474 20099670 -179530480 - L1MB8 LINE L1 -13 6165 5966 2271 74 7 3 chr5 20099673 20099956 -179530194 + AluY SINE Alu 4 287 -24 1835 141 6 28 chr5 20100457 20100776 -179529374 + AluJo SINE Alu 1 312 0 2321 103 3 3 chr5 20102702 20103004 -179527146 - AluSg SINE Alu -8 302 1 1874 130 3 27 chr5 20104008 20104300 -179525850 - AluJb SINE Alu -14 298 14 1878 150 0 7 chr5 20104541 20104821 -179525329 - AluSx SINE Alu -34 278 1 2440 170 0 57 chr5 20104870 20105342 -179524808 + L1MB3 LINE L1 5690 6131 -52 2301 88 7 0 chr5 20105342 20105638 -179524512 + AluSc SINE Alu 9 306 -3 2440 170 0 57 chr5 20105638 20105689 -179524461 + L1MB3 LINE L1 6131 6183 0 345 319 66 28 chr5 20106417 20106604 -179523546 - MIR SINE MIR -10 252 55 1808 143 4 4 chr5 20106604 20106876 -179523274 + AluSx SINE Alu 1 272 -40 345 319 66 28 chr5 20106876 20106901 -179523249 - MIR SINE MIR -207 55 32 578 178 29 63 chr5 20106961 20107051 -179523099 - MER33 DNA MER1_type -2261 324 241 1554 208 10 0 chr5 20107051 20107349 -179522801 + AluJo SINE Alu 1 301 -11 578 178 29 63 chr5 20107349 20107432 -179522718 - MER33 DNA MER1_type -2344 241 157 1684 194 14 7 chr5 20107434 20107723 -179522427 - AluJo SINE Alu -21 291 1 537 163 85 47 chr5 20107723 20107852 -179522298 - AluJo SINE Alu -177 135 2 648 225 46 0 chr5 20107857 20108008 -179522142 - MER33 DNA MER1_type -164 160 3 412 204 16 0 chr5 20108110 20108200 -179521950 + L1P5 LINE L1 5585 5678 -473 2338 92 3 0 chr5 20108345 20108638 -179521512 - AluSg SINE Alu -16 294 1 564 286 69 18 chr5 20108798 20109015 -179521135 + MIR SINE MIR 35 262 0 889 227 85 48 chr5 20109684 20109867 -179520283 - Charlie7 DNA MER1_type -1889 723 548 2258 107 0 0 chr5 20109867 20110157 -179519993 - AluSx SINE Alu -22 290 1 889 227 85 48 chr5 20110157 20110326 -179519824 - Charlie7 DNA MER1_type -2064 548 358 837 265 78 48 chr5 20111110 20111548 -179518602 - HAL1 LINE L1 -10 2497 2047 1578 274 172 35 chr5 20111709 20111882 -179518268 - HAL1 LINE L1 -698 1809 1661 1812 179 10 7 chr5 20111882 20112189 -179517961 + AluJb SINE Alu 1 308 -4 1578 274 172 35 chr5 20112189 20112828 -179517322 - HAL1 LINE L1 -846 1661 1111 1878 128 82 0 chr5 20112828 20112990 -179517160 - AluSq SINE Alu -5 308 161 477 0 0 0 chr5 20112990 20113043 -179517107 + (TG)n Simple_repeat Simple_repeat 2 54 0 1878 128 82 0 chr5 20113043 20113161 -179516989 - AluSq SINE Alu -152 161 5 1578 274 172 35 chr5 20113161 20113500 -179516650 - HAL1 LINE L1 -1396 1111 499 360 266 18 26 chr5 20114569 20114682 -179515468 - MLT1I LTR MaLR 0 409 298 542 296 31 0 chr5 20114721 20114883 -179515267 - MLT1I LTR MaLR -197 212 46 197 250 17 17 chr5 20114973 20115033 -179515117 - MIR SINE MIR -87 175 116 537 128 0 0 chr5 20115206 20115284 -179514866 - AluSg/x SINE Alu -20 290 213 1018 111 7 0 chr5 20116240 20116375 -179513775 + AluSq/x SINE Alu 1 136 -176 1864 123 0 4 chr5 20116375 20116627 -179513523 + AluSx SINE Alu 1 251 -61 491 220 61 45 chr5 20116737 20116869 -179513281 - L2 LINE L2 0 3313 3180 1506 114 4 26 chr5 20116888 20117115 -179513035 + AluJb SINE Alu 87 308 -4 2129 115 0 0 chr5 20117564 20117842 -179512308 + AluSx SINE Alu 6 283 -29 189 74 0 0 chr5 20117845 20117872 -179512278 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1435 242 37 67 chr5 20117878 20118334 -179511816 - L2 LINE L2 -595 2719 2282 1861 162 3 10 chr5 20118334 20118637 -179511513 + AluJo SINE Alu 1 301 -11 1435 242 37 67 chr5 20118637 20118751 -179511399 - L2 LINE L2 -1032 2282 2166 429 279 108 29 chr5 20119121 20119361 -179510789 - MIR SINE MIR -3 259 1 2218 101 20 0 chr5 20119480 20119778 -179510372 - AluSp SINE Alu -9 304 1 2537 140 70 0 chr5 20119778 20120179 -179509971 + MER4B-int LTR ERV1 3647 4075 -2683 5982 119 30 45 chr5 20120179 20121743 -179508407 + pTR5 LTR ERV1 743 2438 0 9247 144 73 23 chr5 20121767 20121860 -179508290 + MER4B-int LTR ERV1 4462 4549 -2209 1893 126 42 3 chr5 20121860 20122145 -179508005 + AluSg SINE Alu 1 296 -14 9247 144 73 23 chr5 20122145 20123255 -179506895 + MER4B-int LTR ERV1 4549 5774 -984 2260 112 3 0 chr5 20123255 20123558 -179506592 + AluSx SINE Alu 1 304 -8 9247 144 73 23 chr5 20123558 20124024 -179506126 + MER4B-int LTR ERV1 5774 6215 -543 2654 84 3 11 chr5 20124025 20124392 -179505758 - LTR7 LTR ERV1 -2 448 85 847 267 14 0 chr5 20125168 20125389 -179504761 + MER58A DNA MER1_type 1 224 0 2189 85 24 3 chr5 20125485 20125779 -179504371 + AluSx SINE Alu 1 300 -12 1563 104 146 15 chr5 20125784 20126044 -179504106 + AluSq SINE Alu 1 294 -9 1974 130 0 7 chr5 20126098 20126382 -179503768 + AluSx SINE Alu 1 282 -30 1095 79 0 0 chr5 20126536 20126676 -179503474 + AluSg/x SINE Alu 173 312 0 508 114 0 0 chr5 20126686 20126756 -179503394 + AluS SINE Alu 6 75 -238 21 0 0 0 chr5 20126966 20126987 -179503163 + AT_rich Low_complexity Low_complexity 1 21 0 486 168 8 48 chr5 20126990 20127115 -179503035 - L1MA8 LINE L1 -3 6288 6169 496 125 0 0 chr5 20127115 20127187 -179502963 + L1MA8 LINE L1 6081 6152 -139 2138 110 13 32 chr5 20127280 20127609 -179502541 + AluSx SINE Alu 9 331 0 1970 120 64 25 chr5 20128135 20128494 -179501656 - THE1C LTR MaLR -2 373 1 2350 87 3 3 chr5 20128573 20128871 -179501279 + AluSx SINE Alu 1 298 -14 814 163 0 15 chr5 20128879 20129014 -179501136 + FLAM_C SINE Alu 1 133 0 2042 119 10 16 chr5 20129556 20129882 -179500268 + AluSx SINE Alu 1 312 0 3024 123 40 80 chr5 20131122 20131699 -179498451 - MER41A LTR ERV1 0 554 1 2371 79 23 0 chr5 20131730 20132034 -179498116 + AluY SINE Alu 1 311 0 235 150 83 33 chr5 20132668 20132728 -179497422 - MER20 DNA MER1_type -2 217 155 815 272 25 0 chr5 20132835 20133074 -179497076 + AluSg/x SINE Alu 68 312 0 279 146 73 18 chr5 20133705 20133760 -179496390 - MER20 DNA MER1_type -2 217 160 24 0 0 0 chr5 20133823 20133847 -179496303 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr5 20135016 20135037 -179495113 + AT_rich Low_complexity Low_complexity 1 21 0 995 132 20 93 chr5 20135517 20135721 -179494429 + MER20 DNA MER1_type 1 189 -30 459 113 0 0 chr5 20137113 20137193 -179492957 + (GA)n Simple_repeat Simple_repeat 1 80 0 252 260 0 88 chr5 20137238 20137430 -179492720 + G-rich Low_complexity Low_complexity 3 177 0 460 310 0 22 chr5 20137472 20137656 -179492494 + G-rich Low_complexity Low_complexity 1 180 0 321 155 0 0 chr5 20137677 20137735 -179492415 + (CGG)n Simple_repeat Simple_repeat 2 59 0 42 71 0 0 chr5 20137888 20137972 -179492178 + GC_rich Low_complexity Low_complexity 1 84 0 26 0 0 0 chr5 20138658 20138684 -179491466 + GC_rich Low_complexity Low_complexity 1 26 0 206 250 0 0 chr5 20141071 20141115 -179489035 + (CATATA)n Simple_repeat Simple_repeat 1 44 0 180 0 0 0 chr5 20141436 20141456 -179488694 + (T)n Simple_repeat Simple_repeat 1 20 0 682 239 149 0 chr5 20143238 20143426 -179486724 + MIR SINE MIR 9 224 -38 199 216 27 108 chr5 20143738 20143812 -179486338 + MIR SINE MIR 28 95 -167 2254 90 27 7 chr5 20146993 20147293 -179482857 - AluSg SINE Alu -4 306 1 1153 132 12 0 chr5 20147293 20147460 -179482690 - AluSg/x SINE Alu -19 293 125 2080 103 10 10 chr5 20147476 20147766 -179482384 - AluSx SINE Alu -22 290 1 606 191 55 0 chr5 20150072 20150182 -179479968 - MLT1B LTR MaLR -7 383 268 1906 83 124 8 chr5 20150183 20150448 -179479702 - AluSg1 SINE Alu -13 296 1 1866 112 40 14 chr5 20150951 20151258 -179478892 - AluSx SINE Alu 0 314 1 390 303 203 29 chr5 20151802 20152271 -179477879 + L2 LINE L2 2708 3265 -7 180 318 91 0 chr5 20152876 20152942 -179477208 + L2 LINE L2 3150 3221 -51 2110 108 0 7 chr5 20154244 20154564 -179475586 + AluSx SINE Alu 1 318 0 2460 72 0 7 chr5 20155656 20155960 -179474190 - AluY SINE Alu -9 302 1 1135 72 144 0 chr5 20156367 20156534 -179473616 - MER30 DNA MER1_type -37 193 3 2329 90 0 3 chr5 20156662 20156963 -179473187 - AluSq SINE Alu -13 300 1 1950 75 0 43 chr5 20157464 20157769 -179472381 + AluY SINE Alu 1 292 -19 1974 129 38 0 chr5 20158140 20158427 -179471723 - AluSx SINE Alu -14 298 1 2403 87 0 0 chr5 20159611 20159909 -179470241 - AluY SINE Alu -13 298 1 726 197 0 33 chr5 20160471 20160623 -179469527 + MLT1A1 LTR MaLR 1 147 -218 297 100 0 0 chr5 20160632 20160682 -179469468 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 503 171 0 0 chr5 20160689 20160765 -179469385 + AluJb SINE Alu 202 277 -35 2124 106 3 3 chr5 20160765 20161082 -179469068 + AluSx SINE Alu 1 317 0 630 162 29 9 chr5 20161123 20161228 -179468922 + U6 snRNA snRNA 1 107 0 542 209 37 15 chr5 20161252 20161382 -179468768 + MLT1A1 LTR MaLR 220 365 0 21 57 0 0 chr5 20161472 20161507 -179468643 + AT_rich Low_complexity Low_complexity 1 35 0 474 207 65 83 chr5 20161552 20161605 -179468545 - MIR SINE MIR -21 241 189 2079 150 0 0 chr5 20161605 20161912 -179468238 - AluSx SINE Alu -5 307 1 474 207 65 83 chr5 20161912 20162027 -179468123 - MIR SINE MIR -73 189 76 1614 155 14 25 chr5 20162837 20163114 -179467036 - L1MC1 LINE L1 -10 6323 6050 2084 130 0 17 chr5 20163665 20163966 -179466184 - AluSx SINE Alu -16 296 1 2166 79 54 0 chr5 20165206 20165486 -179464664 - AluSc SINE Alu -14 295 1 1703 137 7 26 chr5 20165647 20165918 -179464232 + AluSg SINE Alu 33 298 -12 22 0 0 0 chr5 20166127 20166149 -179464001 + AT_rich Low_complexity Low_complexity 1 22 0 228 277 54 45 chr5 20166369 20166481 -179463669 - MIR SINE MIR -129 133 21 2090 109 0 26 chr5 20166792 20167095 -179463055 + AluSg SINE Alu 1 295 -15 1754 154 7 0 chr5 20167505 20167810 -179462340 + AluJb SINE Alu 9 315 0 2144 117 3 19 chr5 20170531 20170839 -179459311 - AluSx SINE Alu -9 303 1 2557 64 0 0 chr5 20171185 20171496 -179458654 - AluY SINE Alu 0 311 1 388 301 24 0 chr5 20171555 20171678 -179458472 - MLT1J LTR MaLR -7 504 379 596 136 0 0 chr5 20171707 20171810 -179458340 + L1MA4 LINE L1 6193 6295 -5 608 128 0 0 chr5 20171817 20171919 -179458231 + L1MA4 LINE L1 6194 6295 -5 556 140 0 0 chr5 20171928 20172028 -179458122 + L1MA4 LINE L1 6196 6295 -5 229 279 96 0 chr5 20172069 20172173 -179457977 - MLT1J LTR MaLR -173 338 225 286 302 108 76 chr5 20172225 20172688 -179457462 - L2 LINE L2 -760 2554 2077 297 318 40 20 chr5 20172946 20173097 -179457053 - MIR SINE MIR -64 198 45 847 199 12 18 chr5 20173444 20173610 -179456540 - MER58B DNA MER1_type 0 341 177 1985 157 0 6 chr5 20173793 20174106 -179456044 - AluJb SINE Alu -1 311 1 22 0 0 0 chr5 20174682 20174704 -179455446 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 20175674 20175695 -179454455 + AT_rich Low_complexity Low_complexity 1 21 0 286 290 30 31 chr5 20177152 20177267 -179452883 - MIR SINE MIR -64 144 47 361 354 12 49 chr5 20178978 20179142 -179451008 + MER5A DNA MER1_type 3 160 -29 2532 128 3 35 chr5 20179625 20180001 -179450149 - THE1B LTR MaLR 0 364 1 185 298 21 0 chr5 20180034 20180081 -179450069 - L2 LINE L2 -1 3271 3224 785 131 0 62 chr5 20181492 20181622 -179448528 + FLAM_C SINE Alu 1 122 -11 23 33 0 0 chr5 20181622 20181652 -179448498 + AT_rich Low_complexity Low_complexity 1 30 0 653 276 12 0 chr5 20182988 20183158 -179446992 + MIR SINE MIR 36 207 -55 2517 63 0 3 chr5 20183449 20183750 -179446400 - AluY SINE Alu -11 300 1 935 122 0 15 chr5 20183903 20184034 -179446116 - FLAM_C SINE Alu 0 133 5 252 171 24 49 chr5 20184053 20184135 -179446015 - L1MA7 LINE L1 -66 6225 6146 2180 96 10 35 chr5 20187132 20187446 -179442704 + AluSx SINE Alu 5 310 -2 2126 118 0 20 chr5 20188115 20188419 -179441731 - AluSg SINE Alu -8 302 5 270 56 0 0 chr5 20188425 20188461 -179441689 + (T)n Simple_repeat Simple_repeat 1 36 0 22 35 0 0 chr5 20188880 20188909 -179441241 + AT_rich Low_complexity Low_complexity 1 29 0 2298 104 3 3 chr5 20190605 20190913 -179439237 - AluSp SINE Alu -5 308 1 25 0 0 0 chr5 20191446 20191471 -179438679 + AT_rich Low_complexity Low_complexity 1 25 0 208 195 0 0 chr5 20191471 20191512 -179438638 - MIR SINE MIR -133 129 89 1802 132 75 0 chr5 20191730 20191750 -179438400 - AluSx SINE Alu 0 312 295 205 40 0 0 chr5 20191750 20191775 -179438375 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 1802 132 75 0 chr5 20191775 20192035 -179438115 - AluSx SINE Alu -17 295 1 2234 118 3 10 chr5 20192398 20192711 -179437439 + AluSx SINE Alu 1 311 -1 236 302 47 39 chr5 20193043 20193172 -179436978 + MIR SINE MIR 124 253 -9 37 0 0 0 chr5 20194636 20194673 -179435477 + AT_rich Low_complexity Low_complexity 1 37 0 874 177 6 0 chr5 20195493 20195651 -179434499 + AluJb SINE Alu 133 291 -21 23 54 0 0 chr5 20196153 20196190 -179433960 + GC_rich Low_complexity Low_complexity 1 37 0 23 68 0 0 chr5 20196201 20196245 -179433905 + GC_rich Low_complexity Low_complexity 1 44 0 488 36 48 0 chr5 20196557 20196640 -179433510 + (TC)n Simple_repeat Simple_repeat 1 87 0 195 69 0 0 chr5 20197341 20197370 -179432780 + (A)n Simple_repeat Simple_repeat 1 29 0 799 142 0 22 chr5 20197579 20197713 -179432437 + FLAM_C SINE Alu 1 131 -2 226 272 102 75 chr5 20198065 20198212 -179431938 + MIR3 SINE MIR 21 171 -37 21 36 0 0 chr5 20199131 20199159 -179430991 + AT_rich Low_complexity Low_complexity 1 28 0 1664 150 52 36 chr5 20200727 20201034 -179429116 - AluJo SINE Alu 0 312 1 1570 177 9 40 chr5 20201317 20201639 -179428511 - AluSx SINE Alu 0 312 1 1852 149 10 3 chr5 20202171 20202459 -179427691 + AluSx SINE Alu 3 292 -20 369 109 0 0 chr5 20202462 20202517 -179427633 + (CA)n Simple_repeat Simple_repeat 2 56 0 197 0 0 67 chr5 20203236 20203266 -179426884 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr5 20203357 20203377 -179426773 + (CA)n Simple_repeat Simple_repeat 2 21 0 747 62 0 0 chr5 20203628 20203725 -179426425 + (TTCC)n Simple_repeat Simple_repeat 1 97 0 2150 112 17 0 chr5 20204117 20204411 -179425739 - AluSx SINE Alu -13 299 1 2502 84 3 0 chr5 20205092 20205401 -179424749 + AluSx SINE Alu 1 310 -2 293 213 32 85 chr5 20205698 20205792 -179424358 - L2 LINE L2 0 3272 3184 819 188 0 0 chr5 20205795 20205928 -179424222 + FLAM_C SINE Alu 1 133 -10 4411 173 18 35 chr5 20205941 20206320 -179423830 + L1MA7 LINE L1 5408 5792 -499 1604 169 68 14 chr5 20206320 20206615 -179423535 + AluJb SINE Alu 1 311 -1 4411 173 18 35 chr5 20206615 20207130 -179423020 + L1MA7 LINE L1 5792 6287 -4 838 329 45 26 chr5 20207136 20207466 -179422684 + L2 LINE L2 2250 2595 -719 2004 134 0 3 chr5 20207466 20207626 -179422524 - AluSx SINE Alu -19 293 133 2174 103 24 0 chr5 20207626 20207917 -179422233 - AluSg SINE Alu -12 298 1 2004 134 0 3 chr5 20207917 20208039 -179422111 - AluSx SINE Alu -179 133 12 838 329 45 26 chr5 20208039 20208237 -179421913 + L2 LINE L2 2595 2788 -526 537 229 121 0 chr5 20208283 20208423 -179421727 - MER45A DNA AcHobo -20 158 2 695 273 123 50 chr5 20208461 20208923 -179421227 + L2 LINE L2 2818 3313 0 2403 119 14 27 chr5 20209013 20209382 -179420768 - THE1B LTR MaLR 0 364 1 248 354 89 15 chr5 20209432 20209827 -179420323 - L2 LINE L2 -337 2977 2554 2306 94 3 0 chr5 20209871 20210158 -179419992 + AluSx SINE Alu 13 300 -12 251 324 83 52 chr5 20210158 20210474 -179419676 - L2 LINE L2 -2912 402 74 501 271 133 0 chr5 20210824 20211005 -179419145 + MIR SINE MIR 40 244 -18 202 280 140 0 chr5 20211319 20211426 -179418724 + L2 LINE L2 3181 3302 -11 1993 169 0 6 chr5 20211520 20211834 -179418316 + AluJb SINE Alu 1 312 0 26 30 0 0 chr5 20212054 20212087 -179418063 + AT_rich Low_complexity Low_complexity 1 33 0 2035 140 13 0 chr5 20212704 20213012 -179417138 - AluSx SINE Alu 0 312 1 2173 121 16 0 chr5 20213488 20213793 -179416357 + AluSx SINE Alu 1 310 -2 255 241 284 7 chr5 20214004 20214145 -179416005 - MER5A DNA MER1_type -1 188 9 2000 127 0 23 chr5 20214275 20214574 -179415576 + AluSg SINE Alu 1 292 -18 1840 154 31 0 chr5 20215223 20215509 -179414641 + AluJb SINE Alu 1 295 -17 842 104 48 0 chr5 20215828 20215953 -179414197 - AluY SINE Alu -7 304 174 1982 120 4 4 chr5 20215953 20216229 -179413921 - AluSg SINE Alu -34 276 1 367 268 0 0 chr5 20216819 20216890 -179413260 + LTR53 LTR ERVL 449 519 0 1943 178 66 6 chr5 20217249 20217650 -179412500 + MLT2B1 LTR ERVL 1 471 -44 338 256 44 0 chr5 20217680 20217770 -179412380 - Tigger3(Golem) DNA MER2_type -2 3027 2934 319 215 0 151 chr5 20217885 20217978 -179412172 - Tigger3(Golem) DNA MER2_type -2949 80 2 352 189 11 11 chr5 20218016 20218106 -179412044 + (TA)n Simple_repeat Simple_repeat 1 90 0 227 155 69 35 chr5 20218148 20218206 -179411944 + MLT2B1 LTR ERVL 456 515 0 496 260 106 19 chr5 20218311 20218519 -179411631 + MIR SINE MIR 6 231 -31 21 0 0 0 chr5 20218519 20218540 -179411610 + AT_rich Low_complexity Low_complexity 1 21 0 2207 112 0 7 chr5 20218604 20218922 -179411228 - AluSx SINE Alu 0 312 2 2145 105 10 20 chr5 20220100 20220396 -179409754 + AluSq SINE Alu 1 293 -20 21 36 0 0 chr5 20220411 20220439 -179409711 + AT_rich Low_complexity Low_complexity 1 28 0 340 273 98 74 chr5 20221219 20221375 -179408775 - Charlie8 DNA MER1_type -59 282 116 2053 125 3 3 chr5 20221375 20221664 -179408486 - AluSx SINE Alu -16 296 8 340 273 98 74 chr5 20221664 20221763 -179408387 - Charlie8 DNA MER1_type -225 116 21 184 165 0 38 chr5 20221905 20221984 -179408166 + (TATAA)n Simple_repeat Simple_repeat 2 77 0 283 0 0 0 chr5 20222370 20222405 -179407745 - L1MA8 LINE L1 -20 6271 6237 283 319 164 13 chr5 20223361 20223593 -179406557 - L1MC4a LINE L1 -1892 5916 5650 424 220 93 8 chr5 20223656 20223774 -179406376 + MIR SINE MIR 16 143 -65 250 278 0 0 chr5 20223836 20223890 -179406260 + polypyrimidine Low_complexity Low_complexity 2 55 0 2173 122 10 0 chr5 20224475 20224771 -179405379 - AluSx SINE Alu -13 299 1 642 158 0 0 chr5 20224931 20225026 -179405124 - Tigger7 DNA MER2_type -2 2485 2391 713 197 42 0 chr5 20225027 20225169 -179404981 - Tigger7 DNA MER2_type -285 265 118 426 227 62 0 chr5 20225285 20225382 -179404768 - Tigger7 DNA MER2_type -2384 103 1 215 73 49 0 chr5 20227636 20227677 -179402473 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 205 215 62 15 chr5 20227889 20227917 -179402233 - MIR SINE MIR 0 262 237 4607 63 10 0 chr5 20227917 20228500 -179401650 - L1PA14 LINE L1 0 6161 5573 205 215 62 15 chr5 20228500 20228536 -179401614 - MIR SINE MIR -25 237 195 1339 202 11 0 chr5 20228644 20228906 -179401244 + L1MB5 LINE L1 5660 5924 -250 892 152 21 0 chr5 20228910 20229055 -179401095 + L1MB5 LINE L1 6019 6166 -8 1980 139 0 20 chr5 20229065 20229397 -179400753 + AluSg SINE Alu 1 310 0 516 200 0 0 chr5 20229410 20229520 -179400630 + CT-rich Low_complexity Low_complexity 1 110 0 1684 153 75 14 chr5 20229521 20229815 -179400335 - AluJb SINE Alu 0 312 1 270 300 100 0 chr5 20229816 20229906 -179400244 + L2 LINE L2 3215 3313 0 1283 229 79 39 chr5 20229961 20230393 -179399757 - MLT2B1 LTR ERVL 0 414 3 2396 88 3 0 chr5 20230440 20230736 -179399414 - AluSq SINE Alu -16 297 1 274 291 0 13 chr5 20230956 20231035 -179399115 + MIR3 SINE MIR 103 180 -28 2162 128 0 0 chr5 20231329 20231619 -179398531 - AluSx SINE Alu -22 290 1 1174 127 1 7 chr5 20231714 20231904 -179398246 - pTR5 LTR ERV1 -2042 396 75 355 183 56 75 chr5 20231904 20232011 -179398139 - LTR30 LTR ERV1 -73 721 544 4051 158 100 26 chr5 20232011 20232935 -179397215 - pTR5 LTR ERV1 -413 2025 742 32 43 0 0 chr5 20233685 20233731 -179396419 + AT_rich Low_complexity Low_complexity 1 46 0 1814 117 18 15 chr5 20234173 20234447 -179395703 + AluSx SINE Alu 1 275 -37 1060 112 82 12 chr5 20234447 20234617 -179395533 + THE1B LTR MaLR 2 183 -181 2071 124 17 3 chr5 20234617 20234915 -179395235 + AluSq SINE Alu 1 302 -11 318 150 0 163 chr5 20234932 20234968 -179395182 + THE1B LTR MaLR 309 327 -48 2386 88 0 0 chr5 20234968 20235263 -179394887 - AluSc SINE Alu -14 295 1 318 150 0 163 chr5 20235263 20235306 -179394844 + THE1B LTR MaLR 327 375 0 1955 136 35 0 chr5 20236456 20236742 -179393408 - AluSx SINE Alu -16 296 1 569 220 90 40 chr5 20236793 20236970 -179393180 + MER5A DNA MER1_type 4 189 0 1308 218 85 13 chr5 20236978 20237294 -179392856 + MER58B DNA MER1_type 1 339 -2 304 181 60 43 chr5 20238727 20238843 -179391307 - L1MC4 LINE L1 0 8042 7925 290 204 11 34 chr5 20238843 20238931 -179391219 + (TCCA)n Simple_repeat Simple_repeat 1 86 0 2608 56 3 0 chr5 20238974 20239280 -179390870 + AluY SINE Alu 1 307 -4 1788 147 37 4 chr5 20239756 20240029 -179390121 - AluSx SINE Alu -30 282 1 1655 167 48 4 chr5 20240609 20240726 -179389424 + AluJb SINE Alu 1 111 -216 235 0 57 0 chr5 20240726 20240761 -179389389 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1655 167 48 4 chr5 20240761 20240958 -179389192 + AluJb SINE Alu 111 327 0 2363 43 22 0 chr5 20241853 20242154 -179387996 - AluY SINE Alu 0 307 1 22 56 0 0 chr5 20242448 20242484 -179387666 + AT_rich Low_complexity Low_complexity 1 36 0 2602 44 0 0 chr5 20242486 20242780 -179387370 + AluY SINE Alu 1 294 -17 350 319 9 0 chr5 20244465 20244581 -179385569 - Charlie2 DNA MER1_type -838 2024 1908 1171 167 0 19 chr5 20244870 20245086 -179385064 + AluSx SINE Alu 3 214 -98 1257 259 87 65 chr5 20246250 20247233 -179382917 + L1M4b LINE L1 1350 2527 -4611 718 158 108 0 chr5 20247233 20247353 -179382797 + AluSx SINE Alu 2 134 -178 27557 133 13 14 chr5 20247354 20248572 -179381578 + L1PA8A LINE L1 5 1223 -5223 234 62 0 0 chr5 20248572 20248604 -179381546 + (CAA)n Simple_repeat Simple_repeat 2 33 0 27557 133 13 14 chr5 20248604 20253776 -179376374 + L1PA8A LINE L1 1223 6446 0 875 206 6 0 chr5 20253807 20253967 -179376183 + AluSx SINE Alu 121 281 -29 224 188 87 58 chr5 20254203 20254272 -179375878 + MIR SINE MIR 80 150 -112 2091 139 3 0 chr5 20254370 20254672 -179375478 - AluSq SINE Alu -10 303 1 2393 87 3 3 chr5 20255287 20255598 -179374552 + AluY SINE Alu 1 311 0 192 77 0 0 chr5 20255903 20255929 -179374221 + (TTA)n Simple_repeat Simple_repeat 1 26 0 485 324 104 5 chr5 20255933 20256155 -179373995 - MIR SINE MIR -8 254 11 210 245 128 75 chr5 20256200 20256294 -179373856 - MIR SINE MIR -92 116 18 329 247 0 13 chr5 20256386 20256463 -179373687 - MLT1F1 LTR MaLR -450 117 42 1969 164 48 8 chr5 20256463 20256694 -179373456 - L1MC3 LINE L1 -695 7090 6837 3110 107 9 24 chr5 20256694 20257161 -179372989 - L1PA15 LINE L1 0 6165 5706 1969 164 48 8 chr5 20257161 20257301 -179372849 - L1MC3 LINE L1 -948 6837 6704 550 270 53 11 chr5 20257331 20257520 -179372630 + L1ME3A LINE L1 5964 6160 -10 186 103 0 0 chr5 20257535 20257564 -179372586 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 328 280 68 34 chr5 20257601 20257719 -179372431 + MIR SINE MIR 45 166 -96 209 219 0 16 chr5 20257791 20257820 -179372330 + (TA)n Simple_repeat Simple_repeat 2 30 -34 2759 220 31 32 chr5 20257820 20258474 -179371676 - MER82 DNA MER2_type 0 653 1 209 219 0 16 chr5 20258474 20258508 -179371642 + (TA)n Simple_repeat Simple_repeat 30 64 0 183 245 102 0 chr5 20258705 20258754 -179371396 - L2 LINE L2 -65 3248 3195 834 309 39 21 chr5 20260069 20260457 -179369693 + LTR16B LTR ERVL 66 460 -4 330 348 18 9 chr5 20261346 20261458 -179368692 + MIR SINE MIR 18 130 -78 264 161 0 32 chr5 20261877 20261939 -179368211 + L1MC4 LINE L1 6646 6705 -1337 207 229 0 0 chr5 20261939 20262000 -179368150 + (CATATA)n Simple_repeat Simple_repeat 6 66 0 25 51 0 0 chr5 20262045 20262084 -179368066 + AT_rich Low_complexity Low_complexity 1 39 0 210 143 0 0 chr5 20262391 20262426 -179367724 + (A)n Simple_repeat Simple_repeat 1 35 0 1592 126 3 86 chr5 20262967 20263110 -179367040 + LTR8 LTR ERV1 1 154 -537 2474 70 0 0 chr5 20263110 20263410 -179366740 - AluY SINE Alu -11 300 1 8021 62 4 2 chr5 20263410 20265151 -179364999 - L1PA6 LINE L1 -6 6148 4405 1592 126 3 86 chr5 20265151 20265308 -179364842 + LTR8 LTR ERV1 152 277 -414 874 115 43 14 chr5 20265327 20265466 -179364684 + LTR8 LTR ERV1 549 691 0 180 154 0 0 chr5 20265571 20265597 -179364553 + MER5A DNA MER1_type 1 26 -163 4025 138 19 12 chr5 20265598 20266050 -179364100 + L1PA16 LINE L1 5524 5984 -182 2062 134 0 0 chr5 20266050 20266391 -179363759 + AluSx SINE Alu 1 341 0 4025 138 19 12 chr5 20266391 20266575 -179363575 + L1PA16 LINE L1 5984 6165 -1 761 238 24 0 chr5 20266581 20266745 -179363405 + MER5A DNA MER1_type 11 178 -11 204 294 73 0 chr5 20266847 20266915 -179363235 - MIR SINE MIR -64 144 72 327 49 0 0 chr5 20267286 20267327 -179362823 + (TG)n Simple_repeat Simple_repeat 1 41 0 1968 136 37 0 chr5 20268833 20269128 -179361022 - AluSx SINE Alu -6 306 1 1696 191 3 7 chr5 20269133 20269437 -179360713 - AluJb SINE Alu -9 303 1 191 227 0 0 chr5 20270658 20270702 -179359448 + L2 LINE L2 3270 3313 0 1461 158 31 15 chr5 20272289 20272549 -179357601 + L1MC1 LINE L1 6070 6333 0 24 77 0 0 chr5 20273673 20273725 -179356425 + AT_rich Low_complexity Low_complexity 1 52 0 527 248 55 14 chr5 20273811 20273956 -179356194 + L1ME1 LINE L1 6011 6161 -5 2795 96 3 0 chr5 20274226 20274580 -179355570 - THE1A LTR MaLR 0 355 1 2319 74 0 0 chr5 20274710 20275031 -179355119 + AluY SINE Alu 1 321 0 2046 231 13 18 chr5 20275037 20275487 -179354663 - LTR40b LTR ERVL -14 448 1 206 333 131 0 chr5 20276113 20276212 -179353938 + L2 LINE L2 3161 3272 0 4222 125 49 29 chr5 20276246 20276965 -179353185 + L1MA8 LINE L1 5542 6274 -17 297 0 0 0 chr5 20278473 20278506 -179351644 + (CA)n Simple_repeat Simple_repeat 1 33 0 541 338 96 39 chr5 20278508 20279144 -179351006 + L2 LINE L2 339 1010 -2304 327 370 39 8 chr5 20279387 20279514 -179350636 + L2 LINE L2 3134 3264 -8 237 209 0 0 chr5 20279514 20279557 -179350593 + (CA)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr5 20280873 20280893 -179349257 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2559 164 58 14 chr5 20281861 20282415 -179347735 - LTR1 LTR ERV1 0 785 208 2130 130 0 13 chr5 20282523 20282824 -179347326 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 20282882 20282903 -179347247 + AT_rich Low_complexity Low_complexity 1 21 0 1859 160 0 14 chr5 20282909 20283202 -179346948 - AluJb SINE Alu -23 289 1 2339 206 47 30 chr5 20283260 20283826 -179346324 - L1MB8 LINE L1 0 6178 5600 2214 117 0 3 chr5 20283826 20284126 -179346024 - AluSq SINE Alu -14 299 1 2339 206 47 30 chr5 20284126 20284157 -179345993 - L1MB8 LINE L1 -578 5600 5571 2323 157 100 25 chr5 20285146 20285177 -179344973 + MLT1D LTR MaLR 1 28 -477 306 0 0 0 chr5 20285177 20285211 -179344939 + (CA)n Simple_repeat Simple_repeat 1 34 0 2323 157 100 25 chr5 20285211 20285649 -179344501 + MLT1D LTR MaLR 28 505 0 2030 142 3 7 chr5 20286539 20286842 -179343308 + AluSx SINE Alu 1 302 -10 269 297 42 68 chr5 20288126 20288244 -179341906 + MER102a DNA MER1_type 213 327 -3 1005 178 91 17 chr5 20288440 20288670 -179341480 + L1M4 LINE L1 5321 5567 -607 804 183 27 27 chr5 20288741 20288927 -179341223 - MER5A DNA MER1_type -3 186 1 545 290 107 34 chr5 20288941 20289269 -179340881 - MLT1I LTR MaLR -57 352 1 242 106 21 0 chr5 20289694 20289741 -179340409 + (TCCC)n Simple_repeat Simple_repeat 4 51 0 26 0 0 0 chr5 20290699 20290725 -179339425 + AT_rich Low_complexity Low_complexity 1 26 0 441 255 57 126 chr5 20291135 20291304 -179338846 + MIR SINE MIR 33 212 -50 1939 83 0 30 chr5 20291304 20291592 -179338558 + AluSg SINE Alu 24 303 0 441 255 57 126 chr5 20291592 20291644 -179338506 + MIR SINE MIR 212 239 -23 2280 138 11 8 chr5 20291644 20291998 -179338152 + THE1A LTR MaLR 1 355 0 441 255 57 126 chr5 20291998 20292021 -179338129 + MIR SINE MIR 239 262 0 2250 117 3 3 chr5 20292359 20292667 -179337483 + AluSq SINE Alu 1 308 -5 782 192 13 13 chr5 20292949 20293100 -179337050 + LTR23 LTR ERV1 1 151 -286 741 197 42 104 chr5 20293177 20293410 -179336740 + LTR56 LTR ERV1 167 380 -57 2207 134 3 0 chr5 20293410 20293715 -179336435 - AluSx SINE Alu -6 306 1 741 197 42 104 chr5 20293715 20293770 -179336380 + LTR56 LTR ERV1 380 437 0 1279 177 5 5 chr5 20293810 20294030 -179336120 + MLT2B2 LTR ERVL 1 220 -295 477 270 23 46 chr5 20294034 20294222 -179335928 - MER93b LTR ERV1 -4 399 192 1443 201 5 19 chr5 20294357 20294716 -179335434 + MLT2B1 LTR ERVL 211 520 0 2238 127 33 28 chr5 20294738 20295100 -179335050 - THE1B LTR MaLR 0 364 1 207 211 0 0 chr5 20295755 20295793 -179334357 + GA-rich Low_complexity Low_complexity 3 40 0 1502 186 25 14 chr5 20296731 20297006 -179333144 - AluJo SINE Alu -30 282 5 2484 120 8 19 chr5 20297102 20297470 -179332680 - THE1B LTR MaLR 0 364 1 1353 215 46 70 chr5 20298278 20298788 -179331362 - MLT1F1 LTR MaLR -71 496 1 343 285 118 68 chr5 20299072 20299412 -179330738 - MLT1K LTR MaLR -36 552 196 2099 110 7 4 chr5 20299690 20300087 -179330063 - AluSx SINE Alu 0 398 1 368 194 0 0 chr5 20300634 20300696 -179329454 + AluJ/FRAM SINE Alu 222 283 -19 327 25 0 0 chr5 20300909 20300949 -179329201 + (TG)n Simple_repeat Simple_repeat 1 40 0 210 245 0 0 chr5 20301739 20301788 -179328362 - L2 LINE L2 0 3313 3265 547 305 110 40 chr5 20301916 20302294 -179327856 - L2 LINE L2 -212 3060 2652 1783 122 108 11 chr5 20302294 20302573 -179327577 + AluSx SINE Alu 1 306 -6 547 305 110 40 chr5 20302573 20302617 -179327533 - L2 LINE L2 -620 2652 2612 1923 163 8 58 chr5 20302749 20303056 -179327094 - MLT1A1 LTR MaLR -1 364 78 2351 93 3 10 chr5 20303056 20303366 -179326784 + AluSc SINE Alu 2 309 0 1923 163 8 58 chr5 20303366 20303439 -179326711 - MLT1A1 LTR MaLR -287 78 3 239 198 71 71 chr5 20303461 20303587 -179326563 + Charlie7 DNA MER1_type 2453 2578 -34 1395 188 86 0 chr5 20303587 20303704 -179326446 + AluJo SINE Alu 5 111 -201 297 0 0 0 chr5 20303704 20303737 -179326413 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1395 188 86 0 chr5 20303737 20303875 -179326275 + AluJo SINE Alu 111 282 -30 255 283 53 0 chr5 20303979 20304092 -179326058 - L2 LINE L2 -706 2608 2490 2707 123 34 5 chr5 20304673 20305023 -179325127 + MSTA LTR MaLR 1 366 -62 2109 117 30 3 chr5 20305023 20305323 -179324827 - AluSg SINE Alu -2 308 1 2707 123 34 5 chr5 20305323 20305388 -179324762 + MSTA LTR MaLR 366 428 0 491 88 0 15 chr5 20306225 20306293 -179323857 + 7SK RNA RNA 127 193 0 2212 101 3 10 chr5 20306449 20306747 -179323403 - AluSp SINE Alu -17 296 1 2241 125 3 0 chr5 20306773 20307076 -179323074 + AluSx SINE Alu 1 304 -8 1972 191 58 25 chr5 20307533 20307982 -179322168 - MLT1D LTR MaLR -41 464 1 263 49 0 73 chr5 20308002 20308043 -179322107 + LTR67 LTR ERVL 102 139 -418 * 747 162 111 79 chr5 20308034 20308120 -179322030 + MER96B DNA MER1_type? 9 91 -326 2160 135 0 0 chr5 20308120 20308417 -179321733 - AluSx SINE Alu -15 297 1 747 162 111 79 chr5 20308417 20308546 -179321604 + MER96B DNA MER1_type? 91 231 -186 339 331 52 7 chr5 20308787 20308941 -179321209 + LTR67 LTR ERVL 394 554 -3 2283 100 3 13 chr5 20309085 20309395 -179320755 + AluSx SINE Alu 5 311 -1 575 148 0 9 chr5 20310708 20310816 -179319334 + (TTCC)n Simple_repeat Simple_repeat 4 110 0 228 89 0 54 chr5 20310861 20310917 -179319233 + (TTTC)n Simple_repeat Simple_repeat 1 53 0 1292 191 12 8 chr5 20310940 20311192 -179318958 - AluJb SINE Alu -1 311 59 227 211 66 26 chr5 20311360 20311436 -179318714 - LTR33A LTR ERVL -6 517 439 829 136 0 0 chr5 20311993 20312111 -179318039 + FLAM_C SINE Alu 1 118 -25 27 0 0 0 chr5 20312111 20312138 -179318012 + AT_rich Low_complexity Low_complexity 1 27 0 527 331 83 28 chr5 20312189 20312624 -179317526 - L2 LINE L2 -44 3269 2811 1838 150 0 0 chr5 20313359 20313481 -179316669 + AluJb SINE Alu 1 122 -190 298 0 48 0 chr5 20313481 20313523 -179316627 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1838 150 0 0 chr5 20313523 20313680 -179316470 + AluJb SINE Alu 121 280 -32 214 196 22 0 chr5 20315293 20315339 -179314811 + L2 LINE L2 3214 3260 -12 2216 109 0 0 chr5 20315438 20315751 -179314399 - AluSq SINE Alu 0 313 1 307 236 136 26 chr5 20315880 20316071 -179314079 - L1MC5 LINE L1 -210 7751 7540 2421 122 25 0 chr5 20316141 20316494 -179313656 + THE1B LTR MaLR 3 364 0 956 116 102 0 chr5 20316654 20316801 -179313349 - THE1B LTR MaLR -202 162 1 209 160 0 40 chr5 20316802 20316852 -179313298 + (CATA)n Simple_repeat Simple_repeat 4 51 0 1348 155 28 1 chr5 20316873 20317154 -179312996 - MLT2C2 LTR ERVL -67 330 1 2170 120 6 19 chr5 20317444 20317760 -179312390 + AluSx SINE Alu 1 312 0 4699 121 10 0 chr5 20317878 20318565 -179311585 - L1PA15 LINE L1 -4 6161 5468 1731 210 9 9 chr5 20318876 20319219 -179310931 + MLT2C1 LTR ERVL 3 345 -52 216 184 0 0 chr5 20319224 20319262 -179310888 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 253 152 22 0 chr5 20319274 20319320 -179310830 + MLT2C1 LTR ERVL 350 396 -1 276 211 0 13 chr5 20319686 20319762 -179310388 + (TA)n Simple_repeat Simple_repeat 1 75 0 2881 161 59 51 chr5 20321367 20321974 -179308176 - LTR9 LTR ERV1 0 612 1 1732 113 0 0 chr5 20322335 20322565 -179307585 - AluSx SINE Alu -17 295 66 1041 176 111 111 chr5 20322565 20323007 -179307143 - LTR7 LTR ERV1 -7 443 2 527 115 0 13 chr5 20323007 20323085 -179307065 - AluSx SINE Alu -235 78 2 1094 208 253 5 chr5 20323438 20323813 -179306337 + MER110 LTR ERV1 10 477 -14 1662 172 3 27 chr5 20324070 20324367 -179305783 + AluJo SINE Alu 1 290 -22 2130 118 0 26 chr5 20324367 20324671 -179305479 - AluSx SINE Alu -16 296 1 35 0 0 0 chr5 20324677 20324712 -179305438 + AT_rich Low_complexity Low_complexity 1 35 0 458 300 70 30 chr5 20325146 20325254 -179304896 - L1ME4a LINE L1 -279 5842 5740 195 42 0 0 chr5 20325254 20325278 -179304872 + (TA)n Simple_repeat Simple_repeat 2 25 0 458 300 70 30 chr5 20325278 20325439 -179304711 - L1ME4a LINE L1 -381 5740 5562 491 288 121 68 chr5 20326321 20326912 -179303238 - L2 LINE L2 -38 3275 2633 2267 96 3 0 chr5 20326912 20327205 -179302945 + AluSx SINE Alu 8 301 -11 491 288 121 68 chr5 20327205 20327312 -179302838 - L2 LINE L2 -680 2633 2533 1913 226 79 92 chr5 20327315 20327377 -179302773 - MER21B LTR ERV1 -75 788 727 180 0 0 0 chr5 20327377 20327397 -179302753 + (CAATT)n Simple_repeat Simple_repeat 2 21 0 1913 226 79 92 chr5 20327397 20328131 -179302019 - MER21B LTR ERV1 -136 727 2 2133 113 10 0 chr5 20329248 20329539 -179300611 - AluSx SINE Alu -18 294 1 236 224 37 84 chr5 20329861 20329968 -179300182 + Charlie7 DNA MER1_type 3 104 -2508 227 253 105 11 chr5 20330151 20330246 -179299904 - MER5A DNA MER1_type -43 146 43 2130 127 3 3 chr5 20330255 20330562 -179299588 - AluSx SINE Alu -5 307 1 1878 160 0 29 chr5 20330562 20330868 -179299282 - AluJo SINE Alu -15 297 1 662 322 34 39 chr5 20331378 20331735 -179298415 + Charlie2 DNA MER1_type 10 364 -2418 810 183 70 111 chr5 20331738 20331841 -179298309 + Charlie2 DNA MER1_type 2231 2337 -525 2225 110 3 16 chr5 20331841 20332151 -179297999 - AluSx SINE Alu -6 306 1 810 183 70 111 chr5 20332151 20332432 -179297718 + Charlie2 DNA MER1_type 2337 2597 -265 1648 168 56 11 chr5 20332432 20332718 -179297432 - AluJo SINE Alu -13 299 1 810 183 70 111 chr5 20332718 20332774 -179297376 + Charlie2 DNA MER1_type 2597 2654 -208 7531 20 13 0 chr5 20332817 20333683 -179296467 - L1PA4 LINE L1 -1 6154 5278 483 131 0 65 chr5 20333683 20333790 -179296360 + Charlie2 DNA MER1_type 2694 2793 -69 233 163 20 0 chr5 20335741 20335790 -179294360 + CT-rich Low_complexity Low_complexity 6 55 0 6921 60 42 3 chr5 20336271 20337353 -179292797 - L1PA7 LINE L1 0 6154 5062 2006 125 4 4 chr5 20337353 20337634 -179292516 - AluSx SINE Alu -31 281 1 6921 60 42 3 chr5 20337634 20337672 -179292478 - L1PA7 LINE L1 -1092 5062 5027 2134 125 0 3 chr5 20338003 20338298 -179291852 - AluSx SINE Alu -18 294 1 512 272 10 41 chr5 20338313 20338508 -179291642 + L2 LINE L2 3116 3304 -9 255 300 50 10 chr5 20341575 20341675 -179288475 - MIR3 SINE MIR -24 184 81 2027 130 0 7 chr5 20341931 20342215 -179287935 + AluSx SINE Alu 1 282 -30 1743 244 58 50 chr5 20342393 20342979 -179287171 + MLT1E LTR MaLR 1 591 -2 240 190 69 0 chr5 20343346 20343404 -179286746 - MIR SINE MIR -77 185 124 2247 116 3 0 chr5 20343521 20343815 -179286335 + AluSx SINE Alu 1 295 -17 249 139 0 0 chr5 20344566 20344609 -179285541 + (CCAA)n Simple_repeat Simple_repeat 2 44 0 458 274 186 51 chr5 20345090 20345462 -179284688 + L2 LINE L2 1138 1559 -1755 1675 283 82 13 chr5 20345486 20346034 -179284116 + MLT1E LTR MaLR 4 589 -4 1261 175 62 19 chr5 20346122 20346431 -179283719 - MER33 DNA MER1_type -2 322 1 2155 103 3 13 chr5 20346449 20346749 -179283401 + AluSq SINE Alu 1 297 -16 1997 141 10 0 chr5 20346786 20347092 -179283058 - AluSx SINE Alu 0 312 4 875 141 0 8 chr5 20347132 20347260 -179282890 + FLAM_C SINE Alu 2 128 -5 393 117 0 0 chr5 20347260 20347320 -179282830 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 2080 131 3 0 chr5 20348551 20348841 -179281309 - AluSq SINE Alu -22 291 1 22 0 0 0 chr5 20348841 20348863 -179281287 + AT_rich Low_complexity Low_complexity 1 22 0 1927 153 0 3 chr5 20348863 20349151 -179280999 - AluSx SINE Alu -25 287 1 345 232 56 136 chr5 20349398 20349648 -179280502 + MLT1J LTR MaLR 226 455 -56 2124 136 7 0 chr5 20349783 20350091 -179280059 - AluSx SINE Alu -2 310 1 406 265 66 29 chr5 20350658 20350794 -179279356 - L1ME LINE L1 -5924 146 6 293 322 131 0 chr5 20350807 20350907 -179279243 - MIR SINE MIR -2 260 174 221 81 0 27 chr5 20350907 20350944 -179279206 + (CAT)n Simple_repeat Simple_repeat 2 37 0 293 322 131 0 chr5 20350944 20351026 -179279124 - MIR SINE MIR -88 174 54 2264 90 19 26 chr5 20351050 20351362 -179278788 - AluSg SINE Alu 0 310 1 2191 82 3 0 chr5 20351362 20351644 -179278506 - AluY SINE Alu -28 283 1 578 291 11 34 chr5 20351684 20351863 -179278287 - MER5B DNA MER1_type 0 178 4 273 29 0 0 chr5 20353414 20353448 -179276702 + (TG)n Simple_repeat Simple_repeat 2 35 0 198 71 0 0 chr5 20353968 20353996 -179276154 + (TG)n Simple_repeat Simple_repeat 2 29 0 388 349 31 5 chr5 20354805 20355000 -179275150 + MIR SINE MIR 57 256 -6 6600 128 28 16 chr5 20355860 20357337 -179272813 + L1MA3 LINE L1 4810 6305 0 1719 170 7 14 chr5 20357355 20357644 -179272506 + AluJo SINE Alu 3 289 -23 11610 166 5 27 chr5 20357748 20360388 -179269762 + L1PA14 LINE L1 3373 5947 -214 1917 153 14 7 chr5 20360388 20360682 -179269468 + AluSx SINE Alu 1 296 -16 11610 166 5 27 chr5 20360682 20360892 -179269258 + L1PA14 LINE L1 5947 6160 -1 1962 129 24 7 chr5 20360961 20361256 -179268894 + AluSx SINE Alu 1 300 -12 255 59 0 0 chr5 20361291 20361325 -179268825 + Alu SINE Alu 260 293 -7 226 67 0 0 chr5 20361361 20361391 -179268759 + Alu SINE Alu 259 288 -11 266 213 37 19 chr5 20361417 20361525 -179268625 + (TATAA)n Simple_repeat Simple_repeat 5 114 0 742 241 41 24 chr5 20362039 20362209 -179267941 + MER45A DNA AcHobo 5 177 -1 859 232 61 52 chr5 20362617 20362945 -179267205 - MLT1C LTR MaLR 0 467 137 2306 107 3 7 chr5 20363067 20363376 -179266774 + AluSp SINE Alu 1 308 -5 2173 89 34 3 chr5 20364496 20364787 -179265363 + AluSg SINE Alu 1 300 -10 181 315 127 61 chr5 20364907 20365316 -179264834 - L2 LINE L2 -1423 1891 1456 320 230 30 30 chr5 20365358 20365458 -179264692 - L1MC4 LINE L1 -1339 6703 6604 207 127 55 18 chr5 20365458 20365513 -179264637 + (TA)n Simple_repeat Simple_repeat 1 57 0 37 62 0 0 chr5 20365736 20365801 -179264349 + AT_rich Low_complexity Low_complexity 1 65 0 197 108 27 0 chr5 20365893 20365930 -179264220 + (CA)n Simple_repeat Simple_repeat 2 39 0 27 29 0 0 chr5 20366877 20366911 -179263239 + AT_rich Low_complexity Low_complexity 1 34 0 25 0 0 0 chr5 20367272 20367297 -179262853 + AT_rich Low_complexity Low_complexity 1 25 0 1313 180 3 113 chr5 20367586 20367913 -179262237 - AluSp SINE Alu -10 303 13 336 218 127 9 chr5 20367982 20368092 -179262058 - Charlie7 DNA MER1_type -2465 147 25 25 31 0 0 chr5 20368932 20368964 -179261186 + AT_rich Low_complexity Low_complexity 1 32 0 866 219 77 48 chr5 20369256 20369671 -179260479 - Charlie2 DNA MER1_type -32 2830 2404 331 295 31 8 chr5 20369840 20369969 -179260181 + MLT1E3 LTR MaLR 1 132 -522 480 286 91 42 chr5 20370212 20370565 -179259585 + MLT1E3 LTR MaLR 255 624 0 2404 78 0 3 chr5 20372145 20372439 -179257711 - AluY SINE Alu -18 293 1 234 316 0 0 chr5 20374427 20374503 -179255647 - Charlie2a DNA MER1_type -1125 1737 1662 235 308 58 25 chr5 20376511 20376631 -179253519 - MLT1E3 LTR MaLR -346 278 155 3686 207 32 32 chr5 20377152 20378537 -179251613 - L1MA8 LINE L1 -178 6113 4723 413 303 20 13 chr5 20378561 20378713 -179251437 - L1MCa LINE L1 -6268 158 6 28 29 0 0 chr5 20378890 20378925 -179251225 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 20379192 20379215 -179250935 + AT_rich Low_complexity Low_complexity 1 23 0 1039 244 70 15 chr5 20379582 20379853 -179250297 - AluJb SINE Alu -16 286 1 208 146 0 55 chr5 20380828 20380883 -179249267 + (CACAA)n Simple_repeat Simple_repeat 4 55 0 845 108 0 0 chr5 20381056 20381167 -179248983 - AluSq/x SINE Alu -202 111 1 1695 175 0 10 chr5 20381390 20381707 -179248443 + AluSx SINE Alu 3 316 0 239 247 65 11 chr5 20381912 20382005 -179248145 + MLT1E3 LTR MaLR 12 109 -545 556 277 118 45 chr5 20382061 20382483 -179247667 + MLT1E3 LTR MaLR 172 624 0 4684 104 9 0 chr5 20385335 20385999 -179244151 - L1PA8 LINE L1 -36 6136 5467 216 115 58 19 chr5 20387914 20387966 -179242184 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 1402 262 9 5 chr5 20388127 20388489 -179241661 - L1MC1 LINE L1 -17 6316 5961 4579 199 40 25 chr5 20388515 20390028 -179240122 - L1MA8 LINE L1 -25 6266 4727 268 331 27 14 chr5 20390061 20390209 -179239941 - L1MCa LINE L1 -6271 155 6 1114 271 29 4 chr5 20391072 20391353 -179238797 - AluJb SINE Alu -14 288 1 1234 266 16 16 chr5 20392461 20392844 -179237306 - L1MC1 LINE L1 -5 6328 5946 4097 201 31 50 chr5 20392863 20394125 -179236025 - L1MA8 LINE L1 -26 6265 5032 1221 240 0 24 chr5 20394992 20395284 -179234866 - AluJb SINE Alu -23 289 5 2078 122 7 7 chr5 20397369 20397664 -179232486 + AluSc SINE Alu 1 295 -14 339 236 34 11 chr5 20398083 20398172 -179231978 - L1PB3 LINE L1 0 6154 6064 4085 183 35 26 chr5 20398375 20399339 -179230811 - L1PB3 LINE L1 -27 6127 5157 1603 195 3 0 chr5 20400362 20400644 -179229506 - AluJb SINE Alu -29 283 1 244 203 153 17 chr5 20400710 20400828 -179229322 - Charlie7 DNA MER1_type -2456 156 23 804 156 8 0 chr5 20401182 20401310 -179228840 - AluSq/x SINE Alu -183 129 1 1461 207 3 13 chr5 20401534 20401834 -179228316 + AluSx SINE Alu 3 299 -13 229 278 41 0 chr5 20402082 20402179 -179227971 + MLT1E3 LTR MaLR 7 107 -547 443 249 89 69 chr5 20402305 20402666 -179227484 + MLT1E3 LTR MaLR 257 624 0 365 310 9 0 chr5 20404570 20404686 -179225464 - Charlie2 DNA MER1_type -838 2024 1908 1658 174 0 13 chr5 20404975 20405286 -179224864 + AluSx SINE Alu 3 309 -3 439 249 89 69 chr5 20405738 20406099 -179224051 + MLT1E3 LTR MaLR 257 624 0 241 267 11 11 chr5 20406367 20406457 -179223693 - L1MEc LINE L1 -5520 876 787 369 174 230 83 chr5 20406856 20406920 -179223230 + MER20B DNA MER1_type 475 528 -255 2754 133 26 12 chr5 20406920 20407342 -179222808 + MSTA LTR MaLR 1 428 0 369 174 230 83 chr5 20407342 20407505 -179222645 + MER20B DNA MER1_type 528 736 -47 273 208 0 0 chr5 20407505 20407558 -179222592 + MER116 DNA Mariner 1 53 -27 888 146 0 28 chr5 20408197 20408341 -179221809 + FLAM_C SINE Alu 4 143 0 450 285 87 49 chr5 20409585 20410140 -179220010 + L1MEc LINE L1 787 1362 -5034 2038 123 41 0 chr5 20410540 20410833 -179219317 - AluSq SINE Alu -8 305 1 189 184 26 0 chr5 20411045 20411083 -179219067 - MIR SINE MIR -6 256 218 * 195 225 25 0 chr5 20411049 20411089 -179219061 - L2 LINE L2 -16 3256 3216 * 203 162 27 0 chr5 20411058 20411095 -179219055 + L2 LINE L2 1242 1279 -2035 2214 114 0 0 chr5 20412081 20412387 -179217763 + AluSc SINE Alu 1 306 -3 611 334 93 25 chr5 20413822 20414298 -179215852 + L2 LINE L2 2638 3163 -150 2029 159 0 0 chr5 20414298 20414599 -179215551 - AluSx SINE Alu -11 301 1 611 334 93 25 chr5 20414599 20414739 -179215411 + L2 LINE L2 3163 3292 -21 2055 151 40 57 chr5 20414839 20415210 -179214940 + MER47A DNA MER2_type 1 365 -1 189 74 0 0 chr5 20415211 20415238 -179214912 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 380 156 0 13 chr5 20415237 20415314 -179214836 + (TA)n Simple_repeat Simple_repeat 1 76 0 276 30 0 0 chr5 20415344 20415377 -179214773 + (TG)n Simple_repeat Simple_repeat 1 33 0 208 122 0 49 chr5 20416156 20416197 -179213953 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 375 331 19 38 chr5 20417477 20417634 -179212516 - MIR SINE MIR -108 154 1 1564 178 31 14 chr5 20417680 20417973 -179212177 + AluSx SINE Alu 6 303 -9 539 116 0 21 chr5 20417973 20418068 -179212082 + (GGGGA)n Simple_repeat Simple_repeat 2 94 0 1167 120 6 0 chr5 20418094 20418252 -179211898 - AluSx SINE Alu -153 159 1 228 216 27 54 chr5 20418478 20418552 -179211598 + GA-rich Low_complexity Low_complexity 4 75 0 506 227 39 121 chr5 20418610 20418997 -179211153 - L1MC4 LINE L1 0 8042 7688 203 333 11 0 chr5 20421983 20422076 -179208074 + GA-rich Low_complexity Low_complexity 1 94 0 1744 142 35 48 chr5 20422455 20422766 -179207384 + AluJo SINE Alu 1 307 -5 498 335 107 5 chr5 20422870 20423067 -179207083 - MIR SINE MIR -2 260 44 231 343 71 52 chr5 20424066 20424276 -179205874 - MIR SINE MIR -2 260 47 735 269 165 35 chr5 20425962 20426691 -179203459 + L2 LINE L2 2483 3310 -3 669 267 0 0 chr5 20427608 20427728 -179202422 + FLAM_A SINE Alu 1 120 -13 22 43 0 21 chr5 20427734 20427765 -179202385 + AT_rich Low_complexity Low_complexity 1 32 -14 1691 152 11 11 chr5 20427765 20428034 -179202116 + AluJb SINE Alu 17 285 -27 22 43 0 21 chr5 20428034 20428049 -179202101 + AT_rich Low_complexity Low_complexity 32 46 0 216 226 0 38 chr5 20428054 20428107 -179202043 + MIR SINE MIR 212 262 0 22 35 0 0 chr5 20428330 20428359 -179201791 + AT_rich Low_complexity Low_complexity 1 29 0 450 0 0 0 chr5 20428544 20428594 -179201556 + (AATAG)n Simple_repeat Simple_repeat 1 50 0 2494 83 3 0 chr5 20428605 20428917 -179201233 + AluSp SINE Alu 1 313 0 272 306 19 102 chr5 20429490 20429696 -179200454 - MLT1L LTR MaLR -204 411 223 348 305 46 15 chr5 20432822 20432953 -179197197 + MIR3 SINE MIR 33 167 -41 1832 132 189 11 chr5 20434150 20434521 -179195629 - LTR23 LTR ERV1 0 437 1 327 231 0 0 chr5 20435192 20435326 -179194824 + (TG)n Simple_repeat Simple_repeat 2 135 0 240 138 73 0 chr5 20435662 20435771 -179194379 + (TTATA)n Simple_repeat Simple_repeat 4 120 0 180 152 0 0 chr5 20435979 20436012 -179194138 + T-rich Low_complexity Low_complexity 3 35 0 2251 166 54 29 chr5 20437800 20438246 -179191904 - MLT1C LTR MaLR -10 457 1 2093 108 31 0 chr5 20438427 20438714 -179191436 + AluSg SINE Alu 1 296 -14 2826 125 31 7 chr5 20438748 20439165 -179190985 + MSTA LTR MaLR 1 427 -1 272 212 0 45 chr5 20439454 20439520 -179190630 + MLT1K LTR MaLR 49 111 -456 2633 209 22 24 chr5 20439520 20439805 -179190345 + L1MD3 LINE L1 7403 7687 -308 1943 136 0 52 chr5 20439805 20440115 -179190035 + AluSx SINE Alu 1 294 -18 2633 209 22 24 chr5 20440115 20440423 -179189727 + L1MD3 LINE L1 7687 7995 0 997 229 9 9 chr5 20441282 20441500 -179188650 - MLT2B1 LTR ERVL -300 220 3 559 276 114 14 chr5 20441504 20441714 -179188436 + MLT1K LTR MaLR 75 305 -244 1745 194 7 3 chr5 20442008 20442318 -179187832 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr5 20442515 20442536 -179187614 + AT_rich Low_complexity Low_complexity 1 21 0 1774 144 81 11 chr5 20443584 20443868 -179186282 - AluJb SINE Alu -8 304 1 237 352 74 0 chr5 20443937 20444045 -179186105 - L2 LINE L2 -6 3307 3192 593 271 107 20 chr5 20444670 20444914 -179185236 + MLT1K LTR MaLR 322 586 -2 380 237 59 41 chr5 20445069 20445238 -179184912 + HAL1b LINE L1 663 834 -514 2066 70 0 79 chr5 20445394 20445428 -179184722 - AluY SINE Alu -1 310 275 2208 65 0 81 chr5 20445428 20445750 -179184400 - AluY SINE Alu 0 311 16 2066 70 0 79 chr5 20445750 20446030 -179184120 - AluY SINE Alu -36 275 21 2326 45 0 21 chr5 20446031 20446319 -179183831 - AluY SINE Alu -29 282 1 1002 229 69 28 chr5 20646492 20646854 -178983296 + L1MC3 LINE L1 4619 4995 -1151 1377 228 3 13 chr5 20646874 20647177 -178982973 + AluJo SINE Alu 12 311 -1 2672 219 101 32 chr5 20647181 20648350 -178981800 + L1MC3 LINE L1 5000 5395 -751 258 301 7 21 chr5 20648387 20648530 -178981620 + L1M4 LINE L1 4559 4699 -1447 830 250 88 45 chr5 20648601 20649076 -178981074 + L1M4 LINE L1 2938 3448 -2698 2197 103 6 13 chr5 20649076 20649388 -178980762 + AluSg SINE Alu 1 310 0 830 250 88 45 chr5 20649388 20649551 -178980599 + L1M4 LINE L1 3448 3603 -2543 2254 95 89 11 chr5 20649832 20650180 -178979970 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr5 20650243 20650278 -178979872 + AT_rich Low_complexity Low_complexity 1 35 0 31 92 0 0 chr5 20651363 20651450 -178978700 + AT_rich Low_complexity Low_complexity 1 87 0 1224 217 38 28 chr5 20652866 20653184 -178976966 + L1MB4 LINE L1 5860 6180 0 1557 209 67 35 chr5 20653185 20653765 -178976385 + L1MC5 LINE L1 7326 7924 -37 918 237 23 47 chr5 20654006 20654306 -178975844 - L1ME LINE L1 -420 5746 5454 1908 144 3 3 chr5 20654421 20654713 -178975437 - AluSx SINE Alu -20 292 1 183 129 0 0 chr5 20654769 20654800 -178975350 + (TG)n Simple_repeat Simple_repeat 2 32 0 246 135 0 0 chr5 20654802 20654839 -178975311 + MLT2D LTR ERVL 378 414 0 2719 22 0 0 chr5 20654894 20655205 -178974945 + AluY SINE Alu 1 311 0 1732 128 99 0 chr5 20655674 20655947 -178974203 - AluSx SINE Alu -7 305 6 372 309 21 0 chr5 20656003 20656100 -178974050 - MLT1G1 LTR MaLR -421 174 76 26 0 0 0 chr5 20657496 20657522 -178972628 + AT_rich Low_complexity Low_complexity 1 26 0 35 24 0 0 chr5 20658123 20658165 -178971985 + AT_rich Low_complexity Low_complexity 1 42 0 205 149 43 0 chr5 20658486 20658533 -178971617 + (TA)n Simple_repeat Simple_repeat 1 49 0 1876 128 4 0 chr5 20658587 20658853 -178971297 + AluSg SINE Alu 37 303 -7 49 43 0 0 chr5 20660016 20660086 -178970064 + AT_rich Low_complexity Low_complexity 1 70 0 850 118 15 0 chr5 20661342 20661478 -178968672 - L1PA14 LINE L1 -3 6158 6021 11371 192 39 7 chr5 20661479 20665302 -178964848 - L1PA12 LINE L1 -1938 5646 1697 287 299 68 20 chr5 20665583 20665730 -178964420 + L1MEc LINE L1 1628 1781 -4615 264 305 66 12 chr5 20665806 20665973 -178964177 + L1MEc LINE L1 1907 2082 -4314 1644 191 3 0 chr5 20666061 20666343 -178963807 - AluJo SINE Alu -23 289 7 22 0 0 0 chr5 20666362 20666384 -178963766 + AT_rich Low_complexity Low_complexity 1 22 0 321 269 122 21 chr5 20666675 20666875 -178963275 + L1MEc LINE L1 2474 2711 -3504 3099 135 22 8 chr5 20666875 20667365 -178962785 - LOR1a LTR ERV1 0 497 1 321 269 122 21 chr5 20667365 20667443 -178962707 + L1MEc LINE L1 2711 2780 -3435 2101 97 7 30 chr5 20667511 20667810 -178962340 - AluSg SINE Alu -18 292 1 21 36 0 0 chr5 20668521 20668549 -178961601 + AT_rich Low_complexity Low_complexity 1 28 0 396 184 10 19 chr5 20668612 20668715 -178961435 + L1MA4 LINE L1 6197 6298 -2 24 32 0 0 chr5 20668899 20668930 -178961220 + AT_rich Low_complexity Low_complexity 1 31 0 1582 203 101 0 chr5 20669898 20670214 -178959936 - MER7A DNA MER2_type 0 346 1 21 0 0 0 chr5 20670557 20670578 -178959572 + AT_rich Low_complexity Low_complexity 1 21 0 1444 188 3 39 chr5 20670588 20670896 -178959254 + AluJb SINE Alu 3 299 -13 200 143 29 0 chr5 20671466 20671501 -178958649 + (TA)n Simple_repeat Simple_repeat 1 36 0 10079 196 74 24 chr5 20671555 20672462 -178957688 + L1MCa LINE L1 16 877 -5730 419 122 61 0 chr5 20672462 20672544 -178957606 - L1PA13 LINE L1 -1 6162 6076 10079 196 74 24 chr5 20672544 20674152 -178955998 + L1MCa LINE L1 877 2693 -3914 242 129 24 5 chr5 20674252 20674304 -178955846 - THE1A LTR MaLR -259 96 45 1155 250 11 39 chr5 20674345 20674705 -178955445 + L1M4 LINE L1 4516 4865 -1281 245 203 51 0 chr5 20674716 20674775 -178955375 - MSTB1 LTR MaLR -13 419 358 1916 154 36 36 chr5 20674775 20675139 -178955011 - THE1B LTR MaLR 0 364 1 340 333 0 9 chr5 20675251 20675365 -178954785 - L1ME LINE L1 -5059 1325 1213 386 288 79 43 chr5 20675374 20675908 -178954242 - L1ME LINE L1 -5075 1297 745 230 166 95 136 chr5 20676110 20676279 -178953871 - L1ME LINE L1 -5859 513 352 2166 93 10 0 chr5 20676326 20676617 -178953533 + AluSq SINE Alu 1 294 -19 1009 181 12 81 chr5 20677127 20677386 -178952764 - MER65C LTR ERV1 0 461 221 270 191 91 55 chr5 20677478 20677588 -178952562 - MER51D LTR ERV1 -43 614 501 2009 116 4 0 chr5 20677781 20678080 -178952070 - AluSc SINE Alu 0 302 3 1085 215 14 5 chr5 20678368 20678591 -178951559 - MER65C LTR ERV1 -236 225 1 207 214 0 0 chr5 20679975 20680017 -178950133 + A-rich Low_complexity Low_complexity 2 43 0 24 32 0 0 chr5 20681988 20682019 -178948131 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 20682124 20682159 -178947991 + AT_rich Low_complexity Low_complexity 1 35 0 792 277 81 39 chr5 20683556 20683730 -178946420 - MLT1D LTR MaLR -2 503 338 2167 80 6 68 chr5 20683730 20684055 -178946095 + AluSq SINE Alu 1 305 -8 792 277 81 39 chr5 20684055 20684363 -178945787 - MLT1D LTR MaLR -167 338 1 1300 232 33 129 chr5 20684386 20684907 -178945243 - MLT1D-int LTR MaLR -24 1347 877 2053 244 28 62 chr5 20684986 20685774 -178944376 - MLT1D-int LTR MaLR -488 883 5 793 261 82 76 chr5 20685778 20686119 -178944031 - MLT1D LTR MaLR 0 505 125 215 355 55 18 chr5 20687142 20687252 -178942898 + MIR SINE MIR 1 114 -148 357 336 28 49 chr5 20687387 20687711 -178942439 + MLT1I LTR MaLR 76 392 -17 260 229 124 9 chr5 20687720 20687825 -178942325 + MIR SINE MIR 146 262 0 1783 107 8 4 chr5 20687911 20688163 -178941987 + AluSc SINE Alu 1 253 -56 29 28 0 0 chr5 20690018 20690054 -178940096 + AT_rich Low_complexity Low_complexity 1 36 0 302 323 99 25 chr5 20690273 20690474 -178939676 - L1MC/D LINE L1 -2004 5804 5589 1947 136 45 0 chr5 20690828 20691115 -178939035 - AluSx SINE Alu -10 302 3 296 238 25 84 chr5 20691292 20691436 -178938714 + LTR41 LTR ERVL 73 226 -569 320 244 10 8 chr5 20693389 20693487 -178936663 + MLT1I LTR MaLR 71 143 -266 226 339 99 33 chr5 20693679 20693800 -178936350 + LTR67 LTR ERVL 131 259 -298 2844 205 37 18 chr5 20693988 20694613 -178935537 - LTR9B LTR ERV1 -1 643 7 246 288 81 36 chr5 20695583 20695694 -178934456 + L1ME LINE L1 121 236 -5834 431 327 23 8 chr5 20695949 20696212 -178933938 + L1M4 LINE L1 3211 3477 -2669 211 247 14 27 chr5 20696242 20696315 -178933835 + (TATATG)n Simple_repeat Simple_repeat 2 73 0 1455 280 71 67 chr5 20696388 20697614 -178932536 + L1M4 LINE L1 3787 5043 -1103 514 162 15 167 chr5 20697735 20697933 -178932217 + L1MA8 LINE L1 5876 6043 -257 3076 171 139 5 chr5 20698447 20699073 -178931077 - Tigger1 DNA MER2_type -1 2417 1708 264 236 42 7 chr5 20699093 20699237 -178930913 + (TA)n Simple_repeat Simple_repeat 1 149 0 288 77 0 0 chr5 20699268 20699307 -178930843 + (TA)n Simple_repeat Simple_repeat 2 40 0 2388 98 37 13 chr5 20699307 20699684 -178930466 - MLT2A1 LTR ERVL -58 386 1 7905 217 40 24 chr5 20699684 20699848 -178930302 - Tigger1 DNA MER2_type -707 1711 1551 2415 114 22 3 chr5 20699848 20700216 -178929934 - THE1C LTR MaLR 0 375 1 7905 217 40 24 chr5 20700216 20701720 -178928430 - Tigger1 DNA MER2_type -867 1551 17 191 257 14 0 chr5 20702204 20702278 -178927872 + (TATG)n Simple_repeat Simple_repeat 2 76 0 798 158 0 0 chr5 20702334 20702467 -178927683 - FLAM_C SINE Alu 0 133 1 305 210 119 74 chr5 20702567 20702743 -178927407 + MER112 DNA MER1_type 65 248 -12 359 331 44 11 chr5 20703100 20703281 -178926869 - MIR SINE MIR -70 192 6 1199 198 0 117 chr5 20703327 20703523 -178926627 - AluJo SINE Alu -12 300 157 1587 72 5 0 chr5 20703523 20703718 -178926432 - AluSp SINE Alu -117 196 1 1199 198 0 117 chr5 20703718 20703854 -178926296 - AluJo SINE Alu -155 157 7 228 298 0 36 chr5 20704178 20704262 -178925888 + L3 LINE CR1 1381 1461 -116 315 179 18 0 chr5 20704314 20704370 -178925780 + L2 LINE L2 3257 3313 0 186 321 137 61 chr5 20704403 20704665 -178925485 - L3b LINE CR1 -13 1570 1289 897 228 38 0 chr5 20704739 20704923 -178925227 + MER58A DNA MER1_type 3 193 -31 22 0 0 0 chr5 20704924 20704946 -178925204 + AT_rich Low_complexity Low_complexity 1 22 0 7134 87 31 5 chr5 20704946 20706780 -178923370 - L1PA8 LINE L1 -13 6159 4297 10040 119 10 0 chr5 20706780 20708337 -178921813 + L1PA8 LINE L1 2711 4283 -1863 11568 218 27 41 chr5 20708387 20713270 -178916880 + L1PA16 LINE L1 1 4648 -2221 1918 169 36 14 chr5 20713270 20713626 -178916524 + THE1B LTR MaLR 1 364 0 11568 218 27 41 chr5 20713626 20715818 -178914332 + L1PA16 LINE L1 4648 6869 0 447 247 79 44 chr5 20716389 20716738 -178913412 - LTR15 LTR ERV1 0 595 141 24 77 0 0 chr5 20716827 20716879 -178913271 + AT_rich Low_complexity Low_complexity 1 52 0 488 147 0 0 chr5 20717510 20717585 -178912565 + L1PA16 LINE L1 6044 6118 -48 420 268 91 16 chr5 20717708 20717951 -178912199 + L1ME2 LINE L1 4476 4736 -1410 2391 73 0 3 chr5 20717951 20718252 -178911898 - AluY SINE Alu -7 304 5 341 174 81 12 chr5 20718276 20718437 -178911713 + (TA)n Simple_repeat Simple_repeat 1 172 0 316 153 58 36 chr5 20718458 20718595 -178911555 + (TA)n Simple_repeat Simple_repeat 1 140 0 308 261 27 69 chr5 20718605 20718865 -178911285 + L1ME2 LINE L1 4812 5060 -1086 200 200 25 0 chr5 20718959 20718999 -178911151 + (TG)n Simple_repeat Simple_repeat 2 42 0 1368 252 58 78 chr5 20719148 20719818 -178910332 + L1ME2 LINE L1 5360 6016 -148 2303 62 7 7 chr5 20720420 20720729 -178909421 - AluY SINE Alu -2 309 1 330 349 17 8 chr5 20722855 20723047 -178907103 + L1MC/D LINE L1 5462 5659 -510 552 324 74 71 chr5 20723440 20724049 -178906101 + L1ME3 LINE L1 5302 5915 -247 839 309 75 24 chr5 20724246 20724579 -178905571 - MLT1I LTR MaLR 0 409 60 35 63 0 0 chr5 20725189 20725252 -178904898 + AT_rich Low_complexity Low_complexity 1 63 0 206 190 25 38 chr5 20725292 20725371 -178904779 + T-rich Low_complexity Low_complexity 5 82 0 348 222 0 68 chr5 20726706 20726823 -178903327 - MER34C LTR ERV1 -3 582 474 292 177 104 73 chr5 20727110 20727206 -178902944 - MER34B LTR ERV1 -444 121 23 29 28 0 0 chr5 20727645 20727681 -178902469 + AT_rich Low_complexity Low_complexity 1 36 0 202 24 24 73 chr5 20727753 20727794 -178902356 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 186 103 0 0 chr5 20728240 20728269 -178901881 + (CAT)n Simple_repeat Simple_repeat 2 30 0 26 0 0 0 chr5 20730234 20730260 -178899890 + AT_rich Low_complexity Low_complexity 1 26 0 261 211 0 0 chr5 20730358 20730415 -178899735 + (CA)n Simple_repeat Simple_repeat 2 58 0 271 331 32 16 chr5 20731405 20731529 -178898621 + LTR33A LTR ERVL 61 186 -337 413 297 273 8 chr5 20731718 20732099 -178898051 + L2 LINE L2 1752 2233 -1081 324 267 85 120 chr5 20732108 20732684 -178897466 - MLT1F1 LTR MaLR -25 542 3 1066 323 141 22 chr5 20732707 20733509 -178896641 + L2 LINE L2 2258 3183 -130 2887 193 29 8 chr5 20733509 20734099 -178896051 + MER6A DNA MER2_type 4 605 0 1066 323 141 22 chr5 20734099 20734248 -178895902 + L2 LINE L2 3183 3313 0 311 260 30 0 chr5 20734296 20734396 -178895754 + (TG)n Simple_repeat Simple_repeat 2 104 0 2082 190 0 35 chr5 20734635 20734777 -178895373 - MER66B LTR ERV1 -88 398 253 2120 96 10 0 chr5 20734777 20735068 -178895082 - AluSx SINE Alu -18 294 1 2082 190 0 35 chr5 20735068 20735331 -178894819 - MER66B LTR ERV1 -233 253 7 362 390 139 12 chr5 20736005 20736580 -178893570 - L2 LINE L2 -857 2457 1810 1436 209 7 40 chr5 20736816 20737118 -178893032 - AluJb SINE Alu -10 292 1 23 0 0 0 chr5 20737251 20737274 -178892876 + AT_rich Low_complexity Low_complexity 1 23 0 874 191 46 8 chr5 20738021 20738240 -178891910 + MER61D LTR ERV1 340 501 0 23 33 0 0 chr5 20738623 20738653 -178891497 + AT_rich Low_complexity Low_complexity 1 30 0 1418 176 108 3 chr5 20738775 20739099 -178891051 - L1MC1 LINE L1 -197 6136 5779 23 68 0 0 chr5 20739136 20739180 -178890970 + AT_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr5 20739440 20739469 -178890681 + AT_rich Low_complexity Low_complexity 1 29 0 236 30 30 0 chr5 20739981 20740014 -178890136 + (TA)n Simple_repeat Simple_repeat 2 35 0 696 355 83 23 chr5 20740606 20740870 -178889280 + L1M3c LINE L1 1364 1611 -5885 2209 137 28 19 chr5 20740870 20741229 -178888921 + THE1B LTR MaLR 3 364 0 696 355 83 23 chr5 20741229 20741443 -178888707 + L1M3c LINE L1 1611 1871 -5625 2501 271 78 26 chr5 20741547 20742714 -178887436 + L1M3c LINE L1 2017 3100 -4465 2409 65 3 0 chr5 20742714 20743008 -178887142 + AluY SINE Alu 1 295 -16 2501 271 78 26 chr5 20743008 20743351 -178886799 + L1M3c LINE L1 3100 3424 -4141 29 0 0 0 chr5 20743625 20743654 -178886496 + AT_rich Low_complexity Low_complexity 1 29 0 2375 69 0 10 chr5 20744775 20745080 -178885070 + AluY SINE Alu 1 302 -9 200 229 0 21 chr5 20746311 20746359 -178883791 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 436 315 14 7 chr5 20747908 20748054 -178882096 + MIR SINE MIR 48 194 -68 1688 232 25 0 chr5 20748427 20748781 -178881369 + MLT1A1 LTR MaLR 1 363 -2 324 345 80 20 chr5 20748808 20749008 -178881142 + L1MEd LINE L1 71 282 -5837 23 0 0 0 chr5 20749303 20749326 -178880824 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 20749485 20749514 -178880636 + AT_rich Low_complexity Low_complexity 1 29 0 806 251 83 74 chr5 20749666 20750100 -178880050 + L1MCa LINE L1 43 406 -5639 * 2061 249 56 50 chr5 20750097 20751228 -178878922 + L1M3c LINE L1 4174 5311 -2254 2031 189 31 14 chr5 20751229 20751647 -178878503 - LOR1b LTR ERV1 0 461 37 2476 176 7 0 chr5 20751834 20752237 -178877913 - L1PA12 LINE L1 -5867 1714 1309 1573 157 61 66 chr5 20752237 20752614 -178877536 + THE1C LTR MaLR 1 375 0 7396 206 75 5 chr5 20752616 20754152 -178875998 + THE1C-int LTR MaLR 3 1646 -5 1727 168 75 9 chr5 20754159 20754504 -178875646 + THE1C LTR MaLR 5 372 -3 3041 209 4 0 chr5 20754507 20755013 -178875137 - L1PA12 LINE L1 -6274 1307 800 30 77 0 0 chr5 20755288 20755353 -178874797 + AT_rich Low_complexity Low_complexity 1 65 0 213 39 0 0 chr5 20755377 20755403 -178874747 + (TG)n Simple_repeat Simple_repeat 1 26 0 232 91 0 0 chr5 20756022 20756055 -178874095 - L1MEc LINE L1 -916 5299 5267 2350 200 4 0 chr5 20756061 20756531 -178873619 + L1P LINE L1 4035 4506 -1640 887 278 89 25 chr5 20756535 20757143 -178873007 - L1MEc LINE L1 -967 5248 4602 1231 241 20 7 chr5 20757220 20757519 -178872631 - MER58B DNA MER1_type -2 339 37 504 271 65 48 chr5 20757527 20757819 -178872331 - L1MEc LINE L1 -1827 4388 4092 1377 250 76 45 chr5 20757831 20758636 -178871514 - L1MEc LINE L1 -3185 3030 2201 3687 134 35 58 chr5 20758637 20759362 -178870788 - LTR1 LTR ERV1 0 785 78 1675 92 35 0 chr5 20759363 20759590 -178870560 - LTR12 LTR ERV1 0 714 480 277 319 9 0 chr5 20759591 20759707 -178870443 - LTR30 LTR ERV1 -80 642 526 1159 64 0 0 chr5 20759707 20759848 -178870302 - LTR12 LTR ERV1 -455 259 119 257 250 0 0 chr5 20759848 20759900 -178870250 - LTR30 LTR ERV1 -670 52 1 * 303 231 46 0 chr5 20759900 20759949 -178870201 - LTR1 LTR ERV1 -702 83 32 1806 168 3 7 chr5 20760158 20760462 -178869688 - AluSg SINE Alu -6 304 2 529 279 48 86 chr5 20760466 20760908 -178869242 - L1MEc LINE L1 -4320 2076 1670 7484 28 3 1 chr5 20760908 20761984 -178868166 + L1PA4 LINE L1 5078 6155 0 529 279 48 86 chr5 20761984 20762251 -178867899 - L1MEc LINE L1 -4726 1670 1394 26 0 0 0 chr5 20762836 20762862 -178867288 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 20762898 20762920 -178867230 + AT_rich Low_complexity Low_complexity 1 22 0 888 299 25 25 chr5 20763935 20764256 -178865894 - LTR16A LTR ERVL -102 348 28 2173 106 3 3 chr5 20764563 20764855 -178865295 + AluSx SINE Alu 3 294 -18 241 250 37 56 chr5 20765433 20765533 -178864617 - MLT1H1 LTR MaLR -2 553 456 1466 237 85 38 chr5 20765533 20765955 -178864195 + MLT2B1 LTR ERVL 1 442 -78 198 143 0 0 chr5 20765958 20765993 -178864157 + (T)n Simple_repeat Simple_repeat 1 35 0 1804 203 39 6 chr5 20766094 20766458 -178863692 + MSTA LTR MaLR 53 428 0 350 322 61 23 chr5 20766606 20766967 -178863183 + L1ME3 LINE L1 5767 6141 -23 547 241 6 13 chr5 20767376 20767534 -178862616 - LTR38B LTR ERV1 -18 592 436 794 219 12 0 chr5 20767540 20767704 -178862446 + FRAM SINE Alu 1 166 -10 400 274 100 47 chr5 20767722 20768069 -178862081 - LTR38B LTR ERV1 -191 381 1 1851 117 51 11 chr5 20768791 20769064 -178861086 - AluSx SINE Alu -28 284 1 1991 234 37 14 chr5 20769504 20769935 -178860215 + MER21B LTR ERV1 94 534 -329 387 259 105 6 chr5 20769935 20770097 -178860053 + L1M4 LINE L1 5654 5831 -331 2135 263 40 34 chr5 20770160 20770269 -178859881 - MER44D DNA MER2_type -1882 605 498 3594 172 59 17 chr5 20770269 20770605 -178859545 + MER72 LTR ERV1 1 321 -401 2293 103 0 0 chr5 20770605 20770906 -178859244 - AluSc SINE Alu -8 301 1 3594 172 59 17 chr5 20770906 20771262 -178858888 + MER72 LTR ERV1 321 722 0 2135 263 40 34 chr5 20771262 20771881 -178858269 - MER44D DNA MER2_type -1989 498 1 539 308 33 17 chr5 20771881 20772121 -178858029 + L1ME1 LINE L1 5919 6162 -4 885 217 21 5 chr5 20772707 20772896 -178857254 - MLT1B LTR MaLR -8 382 191 289 89 0 36 chr5 20772967 20773023 -178857127 + (TTC)n Simple_repeat Simple_repeat 1 54 0 2398 67 0 3 chr5 20773038 20773338 -178856812 + AluY SINE Alu 1 299 -12 1228 223 22 4 chr5 20773338 20773607 -178856543 - AluJo SINE Alu -36 276 3 567 276 0 7 chr5 20773651 20773803 -178856347 - MLT1B LTR MaLR -238 152 2 27 49 0 0 chr5 20774783 20774824 -178855326 + AT_rich Low_complexity Low_complexity 1 41 0 234 231 0 0 chr5 20775545 20775597 -178854553 - L1MEc LINE L1 -6177 219 168 446 258 163 64 chr5 20775669 20775710 -178854440 - L1M4 LINE L1 -1032 5114 5078 2081 135 7 0 chr5 20775710 20776013 -178854137 + AluSx SINE Alu 5 309 -3 446 258 163 64 chr5 20776013 20776064 -178854086 - L1M4 LINE L1 -1068 5078 5033 1939 144 10 0 chr5 20776064 20776362 -178853788 - AluSx SINE Alu -9 303 3 446 258 163 64 chr5 20776362 20776827 -178853323 - L1M4 LINE L1 -1113 5033 4501 24 53 0 0 chr5 20777060 20777098 -178853052 + AT_rich Low_complexity Low_complexity 1 38 0 364 313 126 27 chr5 20778030 20778404 -178851746 + L1M4 LINE L1 4433 4843 -1303 29 70 0 0 chr5 20778439 20778496 -178851654 + AT_rich Low_complexity Low_complexity 1 57 0 238 279 39 29 chr5 20778550 20778654 -178851496 - MER21B LTR ERV1 -272 591 487 789 280 55 8 chr5 20779555 20779937 -178850213 + L1MC1 LINE L1 2650 3049 -3097 540 276 22 0 chr5 20780473 20780658 -178849492 + L1MC1 LINE L1 3230 3418 -2728 5051 269 37 11 chr5 20780675 20782359 -178847791 + L1MC1 LINE L1 3508 5236 -910 359 228 40 0 chr5 20782361 20782462 -178847688 + L1MA9 LINE L1 6181 6285 -27 21 0 0 0 chr5 20782486 20782507 -178847643 + AT_rich Low_complexity Low_complexity 1 21 0 748 121 0 92 chr5 20782564 20782705 -178847445 + LTR12 LTR ERV1 42 169 -545 4650 142 70 0 chr5 20782792 20783615 -178846535 + L1MC1 LINE L1 5313 6193 -140 1742 71 3 160 chr5 20783635 20783973 -178846177 + LTR12 LTR ERV1 1 285 -429 302 256 11 0 chr5 20783974 20784064 -178846086 + LTR30 LTR ERV1 553 643 -79 662 82 0 0 chr5 20784065 20784150 -178846000 + LTR12 LTR ERV1 481 565 -149 422 209 90 52 chr5 20784150 20784284 -178845866 + L1MC1 LINE L1 6195 6333 0 200 365 35 30 chr5 20784413 20784610 -178845540 + L2 LINE L2 1854 2051 -1263 1876 199 48 70 chr5 20784972 20785530 -178844620 + MLT2B3 LTR ERVL 1 546 -8 30 45 0 0 chr5 20786673 20786717 -178843433 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 20786882 20786908 -178843242 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr5 20786945 20786980 -178843170 + AT_rich Low_complexity Low_complexity 1 35 0 3251 169 26 20 chr5 20787111 20787714 -178842436 + MER4D LTR ERV1 1 607 -296 1914 39 0 22 chr5 20787714 20787945 -178842205 - AluY SINE Alu -2 309 84 1177 68 0 56 chr5 20787945 20788107 -178842043 - AluY SINE Alu -158 153 1 1055 165 181 34 chr5 20788118 20788355 -178841795 + MER4D LTR ERV1 603 874 -29 40 59 0 0 chr5 20788358 20788426 -178841724 + AT_rich Low_complexity Low_complexity 1 68 0 21 0 0 0 chr5 20788731 20788752 -178841398 + AT_rich Low_complexity Low_complexity 1 21 0 2792 165 162 18 chr5 20788816 20789427 -178840723 - LTR34 LTR ERV1 0 699 1 2094 152 16 31 chr5 20789430 20789811 -178840339 - THE1C LTR MaLR 0 375 1 2074 120 7 13 chr5 20789857 20790166 -178839984 - AluSx SINE Alu -5 307 1 2442 70 0 3 chr5 20790524 20790823 -178839327 + AluY SINE Alu 1 298 -13 401 270 45 25 chr5 20790947 20791147 -178839003 + L1MC/D LINE L1 5318 5521 -2287 482 348 44 45 chr5 20792087 20792661 -178837489 - HERVL LTR ERVL -381 5273 4701 255 319 35 18 chr5 20792775 20792888 -178837262 - HERVL LTR ERVL -1180 4584 4470 227 158 18 18 chr5 20794283 20794317 -178835833 + (TA)n Simple_repeat Simple_repeat 2 38 -20 1359 134 51 90 chr5 20794317 20794706 -178835444 + THE1C LTR MaLR 2 375 0 227 158 18 18 chr5 20794706 20794728 -178835422 + (TA)n Simple_repeat Simple_repeat 37 58 0 21 0 0 0 chr5 20795763 20795784 -178834366 + AT_rich Low_complexity Low_complexity 1 21 0 468 123 0 0 chr5 20796018 20796091 -178834059 + (TCCC)n Simple_repeat Simple_repeat 2 74 0 1356 223 24 7 chr5 20796091 20796378 -178833772 - AluJo SINE Alu -10 292 1 257 352 46 50 chr5 20796951 20797232 -178832918 + L2 LINE L2 2113 2392 -922 303 206 0 0 chr5 20797756 20797819 -178832331 - L1MC4 LINE L1 -1339 6703 6641 956 273 68 65 chr5 20798624 20798961 -178831189 + MLT1E LTR MaLR 48 388 -205 2237 113 3 0 chr5 20798961 20799261 -178830889 + AluSp SINE Alu 1 301 -12 956 273 68 65 chr5 20799261 20799307 -178830843 + MLT1E LTR MaLR 388 432 -161 417 94 0 0 chr5 20799307 20799371 -178830779 - L1P LINE L1 -3053 3093 3030 426 285 40 13 chr5 20799371 20799522 -178830628 + MLT1E LTR MaLR 430 584 -9 232 139 23 0 chr5 20799566 20799609 -178830541 - MER116 DNA Mariner 0 80 37 2523 51 0 10 chr5 20799783 20800094 -178830056 + AluY SINE Alu 2 309 -2 28 86 0 0 chr5 20800435 20800505 -178829645 + AT_rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr5 20801467 20801488 -178828662 + AT_rich Low_complexity Low_complexity 1 21 0 317 125 18 0 chr5 20801537 20801593 -178828557 + GA-rich Low_complexity Low_complexity 3 59 0 21 36 0 0 chr5 20801803 20801831 -178828319 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 20801970 20802001 -178828149 + AT_rich Low_complexity Low_complexity 1 31 0 358 139 0 25 chr5 20802263 20802342 -178827808 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 227 191 15 0 chr5 20802729 20802797 -178827353 + (TA)n Simple_repeat Simple_repeat 1 69 0 238 146 18 18 chr5 20802797 20802852 -178827298 + GA-rich Low_complexity Low_complexity 1 55 0 231 178 0 22 chr5 20802930 20802975 -178827175 + LTR16B LTR ERVL 2 45 -419 2289 198 68 28 chr5 20803287 20803754 -178826396 + MLT2B1 LTR ERVL 1 448 -72 327 49 0 0 chr5 20803754 20803795 -178826355 + (TC)n Simple_repeat Simple_repeat 2 42 0 243 0 0 0 chr5 20803794 20803821 -178826329 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 2289 198 68 28 chr5 20803795 20803853 -178826297 + MLT2B1 LTR ERVL 448 520 0 573 341 97 40 chr5 20804653 20805202 -178824948 + HERV16 LTR ERVL 993 1572 -3424 1118 323 57 19 chr5 20805271 20806019 -178824131 + HERV16 LTR ERVL 1758 2515 -2481 10516 109 54 14 chr5 20806101 20807872 -178822278 - MER4-int LTR ERV1 -246 6352 4511 42952 33 21 1 chr5 20807874 20813905 -178816245 + L1PA2 LINE L1 2 6155 0 189 0 0 0 chr5 20813909 20813930 -178816220 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 3529 102 70 20 chr5 20813930 20814516 -178815634 - MER4-int LTR ERV1 -2072 4526 3912 2495 102 65 65 chr5 20814550 20815090 -178815060 - MER4-int LTR ERV1 -3321 3277 2738 1149 209 16 19 chr5 20815091 20815349 -178814801 + LTR8 LTR ERV1 1 257 -434 4036 81 62 21 chr5 20815349 20816014 -178814136 - MER4A-int LTR ERV1 -4103 2495 1804 1304 99 74 79 chr5 20816012 20816102 -178814048 - MER4A-int LTR ERV1 -4210 1268 1179 * 2584 64 0 0 chr5 20816102 20816413 -178813737 + AluY SINE Alu 1 311 0 1304 99 74 79 chr5 20816413 20816711 -178813439 - MER4A-int LTR ERV1 -4299 1179 510 2459 108 136 89 chr5 20816718 20816969 -178813181 - MER4A-int LTR ERV1 -6019 579 341 2111 52 88 0 chr5 20816969 20817241 -178812909 + AluY SINE Alu 1 296 -15 2459 108 136 89 chr5 20817241 20817542 -178812608 - MER4A-int LTR ERV1 -6257 341 1 1434 156 78 47 chr5 20817546 20817879 -178812271 - MER4A LTR ERV1 -1 663 262 255 111 22 22 chr5 20817879 20817924 -178812226 - MER4A LTR ERV1 -566 98 54 850 297 90 29 chr5 20818245 20818397 -178811753 + LTR16B LTR ERVL 1 142 -322 1242 218 84 30 chr5 20818397 20818824 -178811326 - LTR7 LTR ERV1 0 450 1 850 297 90 29 chr5 20818824 20819092 -178811058 + LTR16B LTR ERVL 142 447 -17 746 196 7 0 chr5 20819194 20819337 -178810813 - L1PB4 LINE L1 -7 6149 6006 1644 226 64 10 chr5 20820144 20820552 -178809598 - MER87 LTR ERV1 -2 539 110 397 226 130 35 chr5 20820570 20820685 -178809465 - MER87 LTR ERV1 -397 144 19 227 365 83 39 chr5 20820707 20820888 -178809262 - L2 LINE L2 -38 3234 3046 379 304 136 29 chr5 20821816 20822089 -178808061 + MLT1J2 LTR MaLR 25 312 -134 3110 186 36 3 chr5 20822112 20822698 -178807452 - LTR62 LTR ERVK -2 717 113 491 290 51 42 chr5 20824101 20824315 -178805835 + MER20 DNA MER1_type 3 218 -1 192 77 0 0 chr5 20824973 20824999 -178805151 + (T)n Simple_repeat Simple_repeat 1 26 0 2357 98 0 0 chr5 20825002 20825309 -178804841 - AluY SINE Alu -4 307 1 668 37 0 0 chr5 20825479 20825561 -178804589 + HERVL-A2 LTR ERVL 5573 5654 0 2931 109 24 31 chr5 20825561 20826012 -178804138 + MLT2A2 LTR ERVL 1 448 -5 469 310 46 6 chr5 20826200 20826374 -178803776 + MLT1L LTR MaLR 371 551 -64 181 352 38 0 chr5 20826427 20826532 -178803618 + MIR SINE MIR 154 262 0 221 204 19 0 chr5 20826546 20826600 -178803550 + (TTA)n Simple_repeat Simple_repeat 3 57 0 25 0 0 0 chr5 20826724 20826749 -178803401 + AT_rich Low_complexity Low_complexity 1 25 0 3139 207 75 20 chr5 20828240 20828714 -178801436 - L1MB3 LINE L1 0 6183 5736 1923 190 130 21 chr5 20828714 20829246 -178800904 + LTR49 LTR ERV1 2 591 -4 3139 207 75 20 chr5 20829246 20830013 -178800137 - L1MB3 LINE L1 -447 5736 4870 4822 140 41 32 chr5 20830013 20830284 -178799866 - MER4D LTR ERV1 0 903 636 1891 120 4 7 chr5 20830284 20830560 -178799590 - AluSx SINE Alu 0 312 38 4822 140 41 32 chr5 20830560 20831183 -178798967 - MER4D LTR ERV1 -267 636 1 3139 207 75 20 chr5 20831183 20831200 -178798950 - L1MB3 LINE L1 -1313 4870 4855 185 182 18 0 chr5 20831687 20831742 -178798408 + (TA)n Simple_repeat Simple_repeat 1 56 0 24 0 0 0 chr5 20831843 20831867 -178798283 + AT_rich Low_complexity Low_complexity 1 24 0 2200 123 51 14 chr5 20832788 20833139 -178797011 + THE1B LTR MaLR 1 364 0 11304 102 6 3 chr5 20833139 20834695 -178795455 + THE1B-int LTR MaLR 1 1562 -18 2105 85 85 29 chr5 20834702 20835042 -178795108 + THE1B LTR MaLR 1 359 -5 510 147 42 14 chr5 20835208 20835351 -178794799 + GA-rich Low_complexity Low_complexity 1 147 0 2032 214 57 42 chr5 20836725 20837273 -178792877 + MER34B LTR ERV1 10 565 0 24 0 0 0 chr5 20837634 20837658 -178792492 + AT_rich Low_complexity Low_complexity 1 24 0 2474 60 0 10 chr5 20838281 20838580 -178791570 - AluY SINE Alu -11 300 5 1882 154 30 3 chr5 20840835 20841134 -178789016 + AluSx SINE Alu 1 307 -5 1690 141 96 37 chr5 20841222 20841576 -178788574 + THE1C LTR MaLR 1 375 0 230 224 0 17 chr5 20841595 20841653 -178788497 + L1MCa LINE L1 2006 2062 -4364 * 250 234 0 64 chr5 20841637 20841731 -178788419 - L1MC4 LINE L1 -1340 6702 6615 238 203 0 17 chr5 20841681 20841740 -178788410 + L1MCa LINE L1 2006 2063 -4363 * 183 205 0 0 chr5 20841741 20841780 -178788370 + (TA)n Simple_repeat Simple_repeat 2 40 0 227 174 0 0 chr5 20841780 20841826 -178788324 - LTR66 LTR ERVL -171 439 394 488 106 55 12 chr5 20841832 20842071 -178788079 + (TA)n Simple_repeat Simple_repeat 1 249 0 250 84 74 21 chr5 20842115 20842210 -178787940 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 34 0 0 0 chr5 20842311 20842345 -178787805 + AT_rich Low_complexity Low_complexity 1 34 0 645 93 22 44 chr5 20842345 20842528 -178787622 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 270 123 31 31 chr5 20842533 20842598 -178787552 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 560 152 51 0 chr5 20842599 20842903 -178787247 + (TA)n Simple_repeat Simple_repeat 1 319 0 228 214 0 0 chr5 20843043 20843085 -178787065 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 206 9 103 chr5 20843088 20843195 -178786955 - MLT1E LTR MaLR -7 586 490 1563 143 129 57 chr5 20843919 20844269 -178785881 + THE1C LTR MaLR 1 375 0 192 77 0 0 chr5 20844425 20844451 -178785699 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 244 208 38 0 chr5 20844580 20844633 -178785517 + CT-rich Low_complexity Low_complexity 2 56 0 641 387 88 27 chr5 20844641 20845269 -178784881 - HAL1 LINE L1 -1830 677 12 241 333 0 0 chr5 20845586 20845652 -178784498 - MIR SINE MIR -149 113 48 3417 137 29 19 chr5 20845661 20846331 -178783819 + MER50 LTR ERV1 3 711 -23 9817 160 31 11 chr5 20846778 20849741 -178780409 - L1MA1 LINE L1 0 6302 3272 1070 158 37 84 chr5 20850160 20850457 -178779693 + L1MA7 LINE L1 6007 6289 -2 22 0 0 0 chr5 20850457 20850479 -178779671 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 20851193 20851224 -178778926 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 20852104 20852133 -178778017 + AT_rich Low_complexity Low_complexity 1 29 0 1771 118 0 12 chr5 20852304 20852558 -178777592 - AluSx SINE Alu -25 287 37 456 35 0 0 chr5 20853758 20853816 -178776334 + (CA)n Simple_repeat Simple_repeat 2 59 0 347 279 78 0 chr5 20854117 20854246 -178775904 - MIR SINE MIR -3 259 121 674 302 62 19 chr5 20854504 20854607 -178775543 + MER45C DNA AcHobo 1 98 -855 2067 128 3 3 chr5 20854607 20854905 -178775245 - AluSc SINE Alu -11 298 1 674 302 62 19 chr5 20854905 20855059 -178775091 + MER45C DNA AcHobo 98 269 -684 486 328 0 0 chr5 20855109 20855231 -178774919 + MER45C DNA AcHobo 414 535 -418 4694 190 77 30 chr5 20855956 20856206 -178773944 + L1MA8 LINE L1 3989 4226 -2065 2579 65 0 0 chr5 20856206 20856516 -178773634 + AluY SINE Alu 1 310 -1 4694 190 77 30 chr5 20856516 20857091 -178773059 + L1MA8 LINE L1 4226 4772 -1519 655 134 53 53 chr5 20857091 20857278 -178772872 + L1MA7 LINE L1 6104 6290 -1 4694 190 77 30 chr5 20857278 20857924 -178772226 + L1MA8 LINE L1 4772 5386 -905 2547 40 0 7 chr5 20857924 20858226 -178771924 - AluY SINE Alu -11 300 1 4694 190 77 30 chr5 20858226 20858947 -178771203 + L1MA8 LINE L1 5386 6289 -2 186 103 0 0 chr5 20859039 20859068 -178771082 + (CA)n Simple_repeat Simple_repeat 2 30 0 402 285 146 106 chr5 20859074 20859993 -178770157 - L2 LINE L2 -901 2413 1458 1833 129 27 20 chr5 20860519 20860813 -178769337 - AluSq SINE Alu -9 304 9 524 345 35 16 chr5 20860888 20861204 -178768946 + LTR16C LTR ERVL 170 491 0 239 340 159 39 chr5 20861205 20861502 -178768648 - L2 LINE L2 -2323 991 731 2095 120 0 7 chr5 20861502 20861813 -178768337 + AluSx SINE Alu 2 310 0 239 340 159 39 chr5 20861813 20862055 -178768095 - L2 LINE L2 -2583 731 386 288 268 5 32 chr5 20862267 20862378 -178767772 + MIR SINE MIR 40 149 -65 989 274 72 93 chr5 20863208 20863277 -178766873 - MLT1E LTR MaLR -14 579 510 2302 94 7 0 chr5 20863277 20863585 -178766565 - AluSx SINE Alu -2 310 1 989 274 72 93 chr5 20863585 20864165 -178765985 - MLT1E LTR MaLR -83 510 9 1855 173 35 3 chr5 20864272 20864619 -178765531 - MER46B DNA MER2_type 0 236 4 355 325 96 37 chr5 20864661 20864779 -178765371 - L2 LINE L2 -164 3149 3015 1948 129 26 59 chr5 20864779 20865167 -178764983 - THE1C LTR MaLR 0 375 1 355 325 96 37 chr5 20865167 20865236 -178764914 - L2 LINE L2 -298 3015 2951 384 318 221 21 chr5 20865260 20865366 -178764784 - L2 LINE L2 -529 2785 2701 4631 30 4 4 chr5 20865366 20865924 -178764226 + LTR6B LTR ERV1 1 558 0 384 318 221 21 chr5 20865924 20866147 -178764003 - L2 LINE L2 -612 2702 2390 257 381 36 7 chr5 20866172 20866311 -178763839 - L2 LINE L2 -1167 2147 2005 182 279 47 100 chr5 20866359 20866434 -178763716 - L2 LINE L2 -2156 1158 1081 2190 111 0 16 chr5 20866434 20866749 -178763401 + AluSg SINE Alu 1 310 0 182 279 47 100 chr5 20866749 20866863 -178763287 - L2 LINE L2 -2233 1081 979 1292 168 50 0 chr5 20866863 20867101 -178763049 + MER31A LTR ERV1 1 250 -235 22 0 0 0 chr5 20867372 20867394 -178762756 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 20867453 20867481 -178762669 + AT_rich Low_complexity Low_complexity 1 28 0 4775 62 0 0 chr5 20867483 20868081 -178762069 + L1PA7 LINE L1 5557 6154 0 1375 179 57 24 chr5 20868111 20868408 -178761742 + AluSg SINE Alu 1 307 -3 2466 161 52 0 chr5 20869102 20869543 -178760607 - Tigger1 DNA MER2_type 0 2418 1955 2523 197 30 8 chr5 20869563 20870065 -178760085 - Tigger1 DNA MER2_type -1902 516 4 248 105 0 0 chr5 20870100 20870138 -178760012 - MLT2A2 LTR ERVL 0 453 416 225 178 0 0 chr5 20870156 20870201 -178759949 + L1MC4 LINE L1 6659 6703 -1339 2969 74 28 0 chr5 20870209 20870601 -178759549 - MLT2A1 LTR ERVL -40 404 2 30 0 0 0 chr5 20870925 20870955 -178759195 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 20871261 20871284 -178758866 + AT_rich Low_complexity Low_complexity 1 23 0 276 370 16 16 chr5 20871830 20871957 -178758193 + L2 LINE L2 2593 2719 -595 1869 119 10 31 chr5 20871957 20872251 -178757899 + AluSx SINE Alu 1 288 -24 182 128 26 0 chr5 20872253 20872292 -178757858 + G-rich Low_complexity Low_complexity 2 41 0 325 292 99 55 chr5 20872292 20872494 -178757656 + L2 LINE L2 2703 2913 -401 385 291 38 87 chr5 20872508 20872797 -178757353 + L2 LINE L2 3021 3295 -18 2308 87 3 0 chr5 20874501 20874800 -178755350 - AluY SINE Alu -11 300 1 707 270 25 94 chr5 20875005 20875398 -178754752 - Charlie6 DNA MER1_type -12 3488 3123 215 122 0 24 chr5 20875400 20875441 -178754709 + (TA)n Simple_repeat Simple_repeat 2 41 0 333 152 10 101 chr5 20875441 20875540 -178754610 - L1MC4 LINE L1 -1339 6703 6614 1026 157 15 46 chr5 20875582 20875779 -178754371 - AluSg/x SINE Alu -27 285 95 225 198 70 23 chr5 20875974 20876060 -178754090 - L1MC4 LINE L1 -1339 6703 6614 1546 188 3 31 chr5 20876089 20876382 -178753768 - AluSx SINE Alu -27 285 1 1478 255 20 70 chr5 20876523 20877224 -178752926 + L1ME LINE L1 82 747 -5323 3182 243 35 23 chr5 20877248 20878189 -178751961 - Charlie6 DNA MER1_type -1248 2252 1301 912 214 52 128 chr5 20878196 20878589 -178751561 + MLT1A2 LTR MaLR 11 456 -1 2319 279 105 35 chr5 20878610 20879677 -178750473 - Charlie6 DNA MER1_type -2229 1271 130 2060 115 3 0 chr5 20880226 20880514 -178749636 + AluSx SINE Alu 1 289 -23 1443 172 42 103 chr5 20880611 20880979 -178749171 - MLT1D LTR MaLR 0 505 161 2173 146 33 28 chr5 20880979 20881369 -178748781 + Tigger2a DNA MER2_type 1 392 -42 450 213 13 97 chr5 20881428 20881583 -178748567 - MLT1D LTR MaLR -363 142 1 280 301 21 14 chr5 20881888 20882031 -178748119 + (TA)n Simple_repeat Simple_repeat 2 145 0 231 200 0 0 chr5 20882034 20882084 -178748066 - L1MC4 LINE L1 -1340 6702 6653 1385 269 0 3 chr5 20882151 20882463 -178747687 - MER82 DNA MER2_type -34 619 309 4692 193 34 6 chr5 20882463 20883339 -178746811 + MER54A LTR ERVL 1 901 0 1224 199 46 42 chr5 20883343 20883475 -178746675 - MER82 DNA MER2_type -344 309 179 4098 88 52 5 chr5 20883475 20884056 -178746094 - LTR14B LTR ERVK 0 608 1 1224 199 46 42 chr5 20884056 20884230 -178745920 - MER82 DNA MER2_type -474 179 2 351 0 0 0 chr5 20884285 20884324 -178745826 + (TA)n Simple_repeat Simple_repeat 1 39 0 2323 100 6 0 chr5 20884560 20884871 -178745279 + AluSp SINE Alu 1 313 0 2111 125 3 0 chr5 20885277 20885582 -178744568 - AluSx SINE Alu -6 306 1 22 0 0 0 chr5 20887952 20887974 -178742176 + AT_rich Low_complexity Low_complexity 1 22 0 2373 43 0 0 chr5 20890135 20890439 -178739711 + AluY SINE Alu 1 304 0 373 307 98 7 chr5 20890470 20890623 -178739527 - MIR SINE MIR -64 198 32 269 212 131 10 chr5 20891200 20891299 -178738851 - MIR SINE MIR -74 188 78 315 213 25 0 chr5 20892702 20892782 -178737368 - L1M4c LINE L1 -4198 2186 2105 675 197 120 0 chr5 20892792 20892934 -178737216 - FRAM SINE Alu -19 157 1 1044 243 12 52 chr5 20892943 20893406 -178736744 - L1M4c LINE L1 -4285 2099 1560 312 27 0 0 chr5 20893406 20893443 -178736707 + (TG)n Simple_repeat Simple_repeat 2 38 0 235 263 0 0 chr5 20893459 20893516 -178736634 - L1MEc LINE L1 -3961 2254 2198 425 35 0 0 chr5 20894469 20894527 -178735623 + L1PB1 LINE L1 6094 6151 0 24 67 0 0 chr5 20894903 20894948 -178735202 + AT_rich Low_complexity Low_complexity 1 45 0 622 232 16 0 chr5 20895595 20895720 -178734430 + FRAM SINE Alu 5 131 -45 423 56 0 0 chr5 20895722 20895776 -178734374 + (GGAA)n Simple_repeat Simple_repeat 2 55 0 2144 110 0 3 chr5 20898848 20899139 -178731011 - AluSx SINE Alu -22 290 1 205 268 189 37 chr5 20899297 20899461 -178730689 + L2 LINE L2 3124 3312 -1 23 33 0 0 chr5 20899797 20899827 -178730323 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 20899907 20899943 -178730207 + AT_rich Low_complexity Low_complexity 1 36 0 260 312 21 11 chr5 20899976 20900069 -178730081 - MER76 LTR ERV -402 286 193 551 264 46 23 chr5 20900117 20900291 -178729859 - MER76 LTR ERV -509 179 2 1008 298 156 42 chr5 20900445 20900546 -178729604 - L1MEc LINE L1 -5480 916 828 3804 130 15 40 chr5 20900546 20901269 -178728881 - L1MA4 LINE L1 -3 6297 5593 1008 298 156 42 chr5 20901269 20901955 -178728195 - L1MEc LINE L1 -5568 828 39 22 56 0 0 chr5 20903173 20903209 -178726941 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 20903407 20903436 -178726714 + AT_rich Low_complexity Low_complexity 1 29 0 246 261 37 80 chr5 20903783 20903971 -178726179 - L1ME LINE L1 -265 5856 5677 275 301 29 6 chr5 20904156 20904329 -178725821 - L1P5 LINE L1 -710 5441 5265 28 0 0 0 chr5 20904406 20904434 -178725716 + AT_rich Low_complexity Low_complexity 1 28 0 5527 223 76 21 chr5 20904434 20905018 -178725132 + L1MC3 LINE L1 6206 6757 -1028 192 40 0 0 chr5 20905018 20905043 -178725107 + (CA)n Simple_repeat Simple_repeat 2 26 0 5527 223 76 21 chr5 20905043 20905951 -178724199 + L1MC3 LINE L1 6757 7779 -6 363 117 0 0 chr5 20906624 20906684 -178723466 - L1MA3 LINE L1 0 6305 6246 709 114 53 0 chr5 20906699 20906831 -178723319 - L1PA13 LINE L1 0 6163 6025 308 259 53 53 chr5 20907428 20907559 -178722591 + MLT1H LTR MaLR 25 155 -394 30 0 0 0 chr5 20908009 20908039 -178722111 + AT_rich Low_complexity Low_complexity 1 30 0 40640 44 39 1 chr5 20908598 20914525 -178715625 + L1HS LINE L1 2 6155 0 22 56 0 0 chr5 20915320 20915356 -178714794 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 20915554 20915583 -178714567 + AT_rich Low_complexity Low_complexity 1 29 0 246 261 37 80 chr5 20915930 20916118 -178714032 - L1ME LINE L1 -265 5856 5677 275 301 29 6 chr5 20916303 20916476 -178713674 - L1P5 LINE L1 -710 5441 5265 28 0 0 0 chr5 20916553 20916581 -178713569 + AT_rich Low_complexity Low_complexity 1 28 0 5527 223 76 21 chr5 20916581 20917165 -178712985 + L1MC3 LINE L1 6206 6757 -1028 192 40 0 0 chr5 20917165 20917190 -178712960 + (CA)n Simple_repeat Simple_repeat 2 26 0 5527 223 76 21 chr5 20917190 20918098 -178712052 + L1MC3 LINE L1 6757 7779 -6 363 117 0 0 chr5 20918771 20918831 -178711319 - L1MA3 LINE L1 0 6305 6246 709 114 53 0 chr5 20918846 20918978 -178711172 - L1PA13 LINE L1 0 6163 6025 308 259 53 53 chr5 20919575 20919706 -178710444 + MLT1H LTR MaLR 25 155 -394 30 0 0 0 chr5 20920156 20920186 -178709964 + AT_rich Low_complexity Low_complexity 1 30 0 207 234 0 0 chr5 20921145 20921222 -178708928 + CT-rich Low_complexity Low_complexity 2 78 0 390 294 22 50 chr5 20921922 20922102 -178708048 + L1MC4 LINE L1 6458 6632 -1410 598 219 63 85 chr5 20922111 20922181 -178707969 + L1MC4 LINE L1 6860 6930 -961 215 30 0 30 chr5 20922181 20922214 -178707936 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 598 219 63 85 chr5 20922214 20922535 -178707615 + L1MC4 LINE L1 6930 7395 -496 2171 91 0 14 chr5 20923178 20923474 -178706676 + AluSp SINE Alu 1 292 -21 33 56 0 0 chr5 20923716 20923770 -178706380 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr5 20924027 20924055 -178706095 + AT_rich Low_complexity Low_complexity 1 28 0 237 316 105 13 chr5 20924477 20924629 -178705521 - L2 LINE L2 -1232 2082 1917 25 0 0 0 chr5 20924650 20924675 -178705475 + AT_rich Low_complexity Low_complexity 1 25 0 187 387 0 0 chr5 20924833 20924895 -178705255 + MIR SINE MIR 65 126 -136 21 36 0 0 chr5 20926742 20926770 -178703380 + AT_rich Low_complexity Low_complexity 1 28 0 2082 117 30 0 chr5 20926876 20927176 -178702974 + AluSc SINE Alu 1 309 0 288 182 0 0 chr5 20928519 20928574 -178701576 - MLT1E2 LTR MaLR -1 625 571 1561 274 30 62 chr5 20929518 20930127 -178700023 + MLT1E LTR MaLR 5 593 0 665 281 36 5 chr5 20930391 20930587 -178699563 - MER20 DNA MER1_type -17 202 1 37 23 0 0 chr5 20930889 20930933 -178699217 + AT_rich Low_complexity Low_complexity 1 44 0 443 331 43 46 chr5 20931046 20931396 -178698754 + ERVL LTR ERVL 3806 4154 -1610 2365 134 3 6 chr5 20931412 20931777 -178698373 - THE1B LTR MaLR 0 364 1 1161 183 58 6 chr5 20932001 20932436 -178697714 - LTR54 LTR ERV1 0 510 1 2265 213 104 19 chr5 20932601 20933175 -178696975 + MER67B LTR ERV1 39 661 0 771 172 161 33 chr5 20933604 20933986 -178696164 - LTR54B LTR ERV1 -37 461 1 338 254 113 54 chr5 20934174 20934359 -178695791 + LTR33A LTR ERVL 321 516 -7 684 226 0 0 chr5 20934390 20934514 -178695636 + FLAM_A SINE Alu 2 125 -8 296 232 14 14 chr5 20934546 20934684 -178695466 + (TA)n Simple_repeat Simple_repeat 2 139 0 200 197 0 33 chr5 20935342 20935403 -178694747 + (TATATG)n Simple_repeat Simple_repeat 6 64 0 323 325 98 31 chr5 20935708 20935994 -178694156 - L1MC4 LINE L1 -25 8017 7713 630 65 37 19 chr5 20936064 20936172 -178693978 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 962 260 82 11 chr5 20936176 20936457 -178693693 - AluJb SINE Alu -1 301 1 643 289 12 6 chr5 20936458 20936624 -178693526 - MER110 LTR ERV1 -264 227 61 345 78 182 39 chr5 20937582 20937659 -178692491 + MSTB LTR MaLR 1 88 -338 319 304 112 0 chr5 20937659 20937820 -178692330 - MER69 DNA AcHobo -854 372 194 767 271 102 24 chr5 20937888 20938458 -178691692 + L1MC2 LINE L1 3445 4169 -1977 * 31503 109 11 36 chr5 20938454 20944531 -178685619 + L1PA7 LINE L1 223 6467 -2 666 257 53 5 chr5 20944699 20944905 -178685245 + L1MC2 LINE L1 4733 4948 -1198 4924 183 41 43 chr5 20945023 20945930 -178684220 + L1MC2 LINE L1 4925 5832 -512 1662 193 6 3 chr5 20945930 20946241 -178683909 + AluJb SINE Alu 1 312 0 4924 183 41 43 chr5 20946241 20946262 -178683888 + L1MC2 LINE L1 5832 5852 -492 2305 117 0 0 chr5 20946262 20946571 -178683579 + AluSg SINE Alu 1 309 -1 195 42 0 0 chr5 20946576 20946600 -178683550 + (GA)n Simple_repeat Simple_repeat 1 24 0 4924 183 41 43 chr5 20946600 20947088 -178683062 + L1MC2 LINE L1 5856 6344 0 189 242 121 15 chr5 20948037 20948103 -178682047 + MIR SINE MIR 170 242 -20 195 42 0 0 chr5 20949888 20949912 -178680238 + (TG)n Simple_repeat Simple_repeat 2 25 0 211 234 21 0 chr5 20949926 20949973 -178680177 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 225 0 0 0 chr5 20949979 20950004 -178680146 + (TG)n Simple_repeat Simple_repeat 2 26 0 2200 119 0 13 chr5 20951510 20951822 -178678328 - AluSc SINE Alu 0 309 2 378 283 14 86 chr5 20952102 20952381 -178677769 + MLT1L LTR MaLR 46 304 -311 282 310 39 8 chr5 20952493 20952622 -178677528 + MLT1L LTR MaLR 470 602 -13 243 406 0 10 chr5 20953648 20953749 -178676401 + L2 LINE L2 3173 3272 0 234 328 35 52 chr5 20954100 20954216 -178675934 - MER5B DNA MER1_type -63 115 2 254 307 92 31 chr5 20954639 20954802 -178675348 + MIR SINE MIR 88 260 -2 200 297 0 77 chr5 20955067 20955158 -178674992 - L2 LINE L2 0 3313 3230 213 164 36 55 chr5 20955609 20955664 -178674486 - L2 LINE L2 -670 2644 2591 1155 247 29 47 chr5 20955813 20956153 -178673997 + MLT1B LTR MaLR 5 338 -52 1890 127 3 41 chr5 20956719 20957047 -178673103 + AluSx SINE Alu 1 317 0 2024 187 16 28 chr5 20957324 20957777 -178672373 + MSTB LTR MaLR 6 425 -1 8290 208 15 7 chr5 20957779 20959415 -178670735 + MSTB-int LTR MaLR 2 1651 0 2480 160 12 14 chr5 20959415 20959840 -178670310 + MSTB LTR MaLR 1 424 -2 206 385 66 0 chr5 20960015 20960137 -178670013 + MIR SINE MIR 54 183 -79 438 20 0 0 chr5 20960200 20960251 -178669899 + (CA)n Simple_repeat Simple_repeat 2 52 0 2884 141 42 4 chr5 20961057 20961552 -178668598 - MER75 DNA T2_type 0 514 1 1448 220 43 12 chr5 20961621 20961948 -178668202 + MER1B DNA MER1_type 1 337 0 24 32 0 0 chr5 20962074 20962105 -178668045 + AT_rich Low_complexity Low_complexity 1 31 0 24 67 0 0 chr5 20962493 20962538 -178667612 + AT_rich Low_complexity Low_complexity 1 45 0 3071 94 4 58 chr5 20962747 20963099 -178667051 - L1MA2 LINE L1 0 6304 5989 2304 96 0 0 chr5 20963099 20963390 -178666760 - AluSg SINE Alu -9 301 11 3071 94 4 58 chr5 20963390 20963570 -178666580 - L1MA2 LINE L1 -315 5989 5801 1791 174 22 17 chr5 20963746 20964108 -178666042 - L1 LINE L1 -1372 4774 4411 2038 113 6 41 chr5 20964108 20964296 -178665854 - AluSq SINE Alu -6 307 133 5305 153 30 45 chr5 20964296 20965382 -178664768 + MER11C LTR ERVK 1 1070 -1 2038 113 6 41 chr5 20965382 20965511 -178664639 - AluSq SINE Alu -180 133 1 385 71 29 0 chr5 20965525 20965595 -178664555 + L1MA7 LINE L1 6220 6291 0 1781 188 16 24 chr5 20965924 20966307 -178663843 + MLT1B LTR MaLR 3 382 -8 639 228 49 38 chr5 20966428 20966612 -178663538 + MER5A DNA MER1_type 4 189 0 255 264 107 41 chr5 20966778 20966899 -178663251 - Charlie8 DNA MER1_type -2273 144 16 2021 136 0 0 chr5 20967036 20967347 -178662803 + AluSg SINE Alu 1 311 0 2340 89 0 10 chr5 20970326 20970639 -178659511 + AluSx SINE Alu 1 310 -2 874 287 15 42 chr5 20971543 20971878 -178658272 + MLT2C1 LTR ERVL 13 338 -59 1548 237 62 21 chr5 20972024 20972492 -178657658 - MLT1D LTR MaLR -18 487 1 29 0 0 0 chr5 20972623 20972652 -178657498 + AT_rich Low_complexity Low_complexity 1 29 0 1454 234 33 9 chr5 20973076 20973405 -178656745 - MLT1A1 LTR MaLR -28 337 1 1387 164 194 10 chr5 20974357 20974650 -178655500 - MER47A DNA MER2_type 0 366 20 1050 33 8 0 chr5 20974986 20975108 -178655042 + AluY SINE Alu 1 123 -188 556 201 49 10 chr5 20975212 20975416 -178654734 + AluY SINE Alu 89 300 -11 1484 185 34 27 chr5 20975698 20975990 -178654160 - AluSx SINE Alu -18 294 1 21 57 0 0 chr5 20975996 20976031 -178654119 + AT_rich Low_complexity Low_complexity 1 35 0 1958 117 0 0 chr5 20976443 20976716 -178653434 - AluSg SINE Alu -37 273 1 326 304 31 62 chr5 20976878 20977039 -178653111 - L2 LINE L2 0 3313 3158 252 301 22 44 chr5 20977216 20977352 -178652798 + L2 LINE L2 3009 3141 -172 419 233 50 76 chr5 20978952 20979124 -178651026 + MLT1E2 LTR MaLR 82 260 -264 409 215 47 56 chr5 20979175 20979282 -178650868 + MLT1E2 LTR MaLR 391 496 -130 234 91 0 0 chr5 20979305 20979338 -178650812 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 4559 204 8 70 chr5 20979338 20980547 -178649603 + L1P LINE L1 2466 3599 -2547 21 36 0 0 chr5 20980671 20980699 -178649451 + AT_rich Low_complexity Low_complexity 1 28 0 865 229 61 109 chr5 20982885 20983126 -178647024 - MER67C LTR ERV1 -4 706 455 2132 96 10 3 chr5 20983126 20983429 -178646721 - AluY SINE Alu -6 305 1 1470 186 0 41 chr5 20983439 20983734 -178646416 - AluJo SINE Alu -22 290 8 865 229 61 109 chr5 20983734 20984102 -178646048 - MER67C LTR ERV1 -264 446 116 546 274 68 32 chr5 20984225 20984605 -178645545 - Charlie2 DNA MER1_type -1 2861 2468 820 205 10 10 chr5 20984753 20984948 -178645202 - Charlie2 DNA MER1_type -636 2226 2032 275 257 29 29 chr5 20984981 20985032 -178645118 - Charlie2 DNA MER1_type -897 1965 1915 216 0 0 0 chr5 20985032 20985056 -178645094 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 275 257 29 29 chr5 20985056 20985109 -178645041 - Charlie2 DNA MER1_type -946 1916 1861 444 273 122 63 chr5 20985124 20985410 -178644740 - Charlie2 DNA MER1_type -2465 317 15 1855 151 6 39 chr5 20985617 20985928 -178644222 - AluSx SINE Alu -11 301 1 1052 178 17 0 chr5 20985993 20986167 -178643983 + AluJb SINE Alu 117 293 -19 1668 204 14 19 chr5 20987836 20988203 -178641947 - MER89 LTR ERV1 0 559 195 264 183 11 86 chr5 20988175 20988268 -178641882 - MER89 LTR ERV1 -473 86 1 * 226 309 22 43 chr5 20988839 20988978 -178641172 + MLT1I LTR MaLR 11 146 -263 2154 126 0 0 chr5 20989224 20989517 -178640633 - AluSg SINE Alu -17 293 1 342 0 0 0 chr5 20990872 20990910 -178639240 + (TG)n Simple_repeat Simple_repeat 1 38 0 517 272 82 31 chr5 20992127 20992322 -178637828 - MLT1J2 LTR MaLR -6 444 240 1480 212 0 0 chr5 20992977 20993236 -178636914 + AluSq SINE Alu 1 259 -54 5488 57 48 8 chr5 20994410 20995145 -178635005 + L1PA6 LINE L1 5390 6153 -1 659 165 38 8 chr5 20995858 20995991 -178634159 - LTR3b LTR ERVK -47 453 317 4630 159 31 43 chr5 20995991 20997341 -178632809 - HERVK3 LTR ERVK -384 5561 1321 427 255 0 31 chr5 20997329 20997427 -178632723 - HERVK3 LTR ERVK -6563 680 586 * 636 241 89 15 chr5 20997483 20997686 -178632464 - HERVK3 LTR ERVK -6971 272 55 264 127 254 0 chr5 20997750 20997805 -178632345 - HERVK3 LTR ERVK -7025 218 150 219 182 36 0 chr5 20997898 20997953 -178632197 + (CTACT)n Simple_repeat Simple_repeat 4 60 0 562 230 179 63 chr5 20998341 20998676 -178631474 - MLT1A2 LTR MaLR 0 374 1 219 170 0 0 chr5 21001591 21001638 -178628512 + (TA)n Simple_repeat Simple_repeat 2 48 0 30 0 0 0 chr5 21002408 21002438 -178627712 + AT_rich Low_complexity Low_complexity 1 30 0 228 35 0 0 chr5 21002951 21002980 -178627170 + (TA)n Simple_repeat Simple_repeat 2 30 0 21 82 0 0 chr5 21003451 21003500 -178626650 + AT_rich Low_complexity Low_complexity 1 49 0 1209 229 10 10 chr5 21003629 21003917 -178626233 + AluJo SINE Alu 1 288 -24 430 277 111 65 chr5 21004241 21004566 -178625584 + L1ME1 LINE L1 1093 1432 -4994 509 209 0 9 chr5 21004655 21004765 -178625385 + L1ME1 LINE L1 4388 4496 -1930 22 0 0 0 chr5 21004844 21004866 -178625284 + AT_rich Low_complexity Low_complexity 1 22 0 1645 181 64 61 chr5 21004962 21005169 -178624981 - LTR57 LTR ERVL 0 411 201 2573 48 0 0 chr5 21005169 21005479 -178624671 - AluY SINE Alu -1 310 1 1645 181 64 61 chr5 21005479 21005680 -178624470 - LTR57 LTR ERVL -210 201 2 276 257 89 46 chr5 21005792 21006029 -178624121 + L1ME1 LINE L1 4737 4983 -1443 216 130 0 43 chr5 21006044 21006090 -178624060 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 954 291 64 15 chr5 21006128 21006520 -178623630 + L1ME1 LINE L1 6031 6441 -5 2165 102 0 10 chr5 21006839 21007152 -178622998 - AluSg SINE Alu 0 310 1 23 33 0 0 chr5 21007257 21007287 -178622863 + AT_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr5 21007469 21007512 -178622638 + AT_rich Low_complexity Low_complexity 1 43 0 216 265 231 34 chr5 21008822 21008939 -178621211 + MER5B DNA MER1_type 4 143 -35 2328 60 0 0 chr5 21009026 21009328 -178620822 - L1PA5 LINE L1 0 6154 5853 2162 38 0 4 chr5 21009328 21009591 -178620559 + L1PA5 LINE L1 5600 5861 -293 22 0 0 0 chr5 21009597 21009619 -178620531 + AT_rich Low_complexity Low_complexity 1 22 0 205 171 0 0 chr5 21009840 21009875 -178620275 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 937 308 68 16 chr5 21009955 21010381 -178619769 + MLT1J LTR MaLR 4 451 -60 202 258 15 45 chr5 21010383 21010449 -178619701 + MER5B DNA MER1_type 3 66 -112 1953 137 7 0 chr5 21010950 21011242 -178618908 - AluSx SINE Alu -18 294 1 30 93 0 0 chr5 21011322 21011408 -178618742 + AT_rich Low_complexity Low_complexity 1 86 0 1096 253 133 41 chr5 21012809 21013327 -178616823 - MLT1F1 LTR MaLR -2 565 3 213 318 73 9 chr5 21013380 21013490 -178616660 + L2 LINE L2 854 970 -2344 333 279 152 44 chr5 21013543 21013701 -178616449 + MER5B DNA MER1_type 1 175 -3 804 240 55 10 chr5 21013759 21013959 -178616191 + MER58A DNA MER1_type 4 212 -12 267 31 0 0 chr5 21013997 21014029 -178616121 + (TC)n Simple_repeat Simple_repeat 1 32 0 266 297 52 58 chr5 21014689 21014844 -178615306 - HAL1 LINE L1 -2043 464 311 666 193 183 67 chr5 21014949 21015342 -178614808 - MER31B LTR ERV1 0 514 1 1796 179 105 10 chr5 21015412 21015803 -178614347 - MSTA LTR MaLR 0 428 1 1901 150 29 42 chr5 21015835 21016215 -178613935 + THE1C LTR MaLR 1 375 0 213 226 0 0 chr5 21016291 21016344 -178613806 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 599 244 93 39 chr5 21016539 21016797 -178613353 - MER20B DNA MER1_type -278 505 234 2215 115 3 0 chr5 21017510 21017822 -178612328 - AluSp SINE Alu 0 313 1 729 256 112 48 chr5 21017882 21018174 -178611976 + MER65A LTR ERV1 1 330 -115 2052 131 150 5 chr5 21018174 21018548 -178611602 + MSTA LTR MaLR 1 428 0 729 256 112 48 chr5 21018548 21018673 -178611477 + MER65A LTR ERV1 330 445 0 448 230 0 0 chr5 21018940 21019040 -178611110 + LTR23-int LTR ERV1 891 990 -4133 304 204 186 9 chr5 21019042 21019155 -178610995 + MER34C LTR ERV1 160 292 -293 862 246 83 102 chr5 21019207 21020648 -178609502 + LTR23-int LTR ERV1 1161 2573 -2550 384 236 18 9 chr5 21020646 21020756 -178609394 + LTR23-int LTR ERV1 2481 2591 -2345 * 1773 282 45 53 chr5 21020763 21021515 -178608635 + L1PA12 LINE L1 2 747 -6834 5679 111 31 9 chr5 21021517 21022389 -178607761 + L1PA15 LINE L1 5275 6165 0 1315 161 113 127 chr5 21022449 21023008 -178607142 + LTR23-int LTR ERV1 4026 4576 -1755 207 316 79 40 chr5 21124130 21124282 -178505868 + L2 LINE L2 2355 2512 -802 262 347 100 44 chr5 21124317 21124588 -178505562 + L2 LINE L2 2592 2877 -437 245 348 104 0 chr5 21124748 21124912 -178505238 + L2 LINE L2 3131 3311 -2 257 92 123 77 chr5 21125263 21125328 -178504822 + L1ME LINE L1 5795 5862 -304 4262 215 45 12 chr5 21125472 21125672 -178504478 + L1PB4 LINE L1 4184 4376 -1778 360 0 0 0 chr5 21125672 21125712 -178504438 + (CA)n Simple_repeat Simple_repeat 1 40 0 4262 215 45 12 chr5 21125712 21126719 -178503431 + L1PB4 LINE L1 4376 5429 -725 2420 108 11 19 chr5 21126729 21127107 -178503043 - THE1C LTR MaLR 0 375 1 22 94 0 0 chr5 21127452 21127516 -178502634 + AT_rich Low_complexity Low_complexity 1 64 0 2328 199 12 52 chr5 21127518 21128371 -178501779 - L1PB4 LINE L1 -613 5543 4731 1184 164 36 87 chr5 21128364 21128699 -178501451 + L1PB4 LINE L1 5538 5855 -301 * 817 233 11 0 chr5 21128714 21128890 -178501260 - MSTD LTR MaLR 0 396 219 24 32 0 0 chr5 21129054 21129085 -178501065 + AT_rich Low_complexity Low_complexity 1 31 0 831 202 26 16 chr5 21130512 21130705 -178499445 - L1MA7 LINE L1 -166 6125 5931 694 171 53 35 chr5 21130702 21130872 -178499278 + L1MA7 LINE L1 6119 6291 0 * 1343 234 33 17 chr5 21131095 21131454 -178498696 - MLT1A1 LTR MaLR 0 365 1 1965 196 25 20 chr5 21131454 21131862 -178498288 - MLT1A1-int LTR MaLR 0 1735 1326 2188 238 72 30 chr5 21132212 21132971 -178497179 - MLT1A1-int LTR MaLR -488 883 1 704 245 39 10 chr5 21132982 21133186 -178496964 - MLT1A1 LTR MaLR -11 354 145 718 219 5 23 chr5 21133186 21133401 -178496749 + L1MA4 LINE L1 6087 6297 -3 23 68 0 0 chr5 21133469 21133513 -178496637 + AT_rich Low_complexity Low_complexity 1 44 0 364 256 22 6 chr5 21133618 21133743 -178496407 - MLT1J2 LTR MaLR -208 201 78 405 0 0 0 chr5 21135271 21135316 -178494834 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 71 0 0 chr5 21135602 21135644 -178494506 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr5 21136637 21136662 -178493488 + AT_rich Low_complexity Low_complexity 1 25 0 932 217 157 6 chr5 21137786 21138185 -178491965 + MLT2B1 LTR ERVL 1 515 0 2341 62 3 3 chr5 21138324 21138651 -178491499 + AluY SINE Alu 1 311 0 21 0 0 0 chr5 21138718 21138739 -178491411 + AT_rich Low_complexity Low_complexity 1 21 0 449 328 74 55 chr5 21139429 21139795 -178490355 + L2 LINE L2 2927 3299 -14 26 50 0 0 chr5 21139967 21140007 -178490143 + AT_rich Low_complexity Low_complexity 1 40 0 31 58 0 0 chr5 21140213 21140265 -178489885 + AT_rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr5 21140422 21140445 -178489705 + AT_rich Low_complexity Low_complexity 1 23 0 2064 108 0 0 chr5 21140445 21140731 -178489419 - AluSx SINE Alu -26 286 1 27 0 0 0 chr5 21140949 21140976 -178489174 + AT_rich Low_complexity Low_complexity 1 27 0 29 0 0 0 chr5 21141362 21141391 -178488759 + AT_rich Low_complexity Low_complexity 1 29 0 1325 162 40 166 chr5 21142238 21142471 -178487679 + MSTD LTR MaLR 3 153 -243 1903 119 3 44 chr5 21142471 21142790 -178487360 + AluSq SINE Alu 1 306 -7 1325 162 40 166 chr5 21142790 21143007 -178487143 + MSTD LTR MaLR 153 396 0 207 0 0 0 chr5 21143040 21143063 -178487087 + (T)n Simple_repeat Simple_repeat 1 23 0 273 175 16 0 chr5 21143565 21143628 -178486522 - L1MC4 LINE L1 -1339 6703 6640 2527 281 77 23 chr5 21144676 21145868 -178484282 + L1MA8 LINE L1 1753 2994 -4174 9759 194 55 29 chr5 21145876 21146713 -178483437 + L1MA8 LINE L1 3197 4011 -3301 1942 154 0 0 chr5 21146713 21147011 -178483139 + AluSx SINE Alu 1 298 -14 9759 194 55 29 chr5 21147011 21149656 -178480494 + L1MA8 LINE L1 4011 6805 -507 342 0 0 0 chr5 21149656 21149694 -178480456 + (CA)n Simple_repeat Simple_repeat 2 39 0 9759 194 55 29 chr5 21149694 21150206 -178479944 + L1MA8 LINE L1 6805 7302 -10 258 362 68 34 chr5 21151222 21151429 -178478721 + MIR SINE MIR 25 238 -24 25 51 0 0 chr5 21152143 21152182 -178477968 + AT_rich Low_complexity Low_complexity 1 39 0 28 0 0 0 chr5 21152651 21152679 -178477471 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 21152716 21152739 -178477411 + AT_rich Low_complexity Low_complexity 1 23 0 3373 99 16 4 chr5 21152763 21153257 -178476893 - L1PA13 LINE L1 -4 6159 5660 3599 115 46 7 chr5 21153257 21153961 -178476189 - L1PA12 LINE L1 -334 5834 5097 537 210 0 16 chr5 21154255 21154379 -178475771 - L1MA8 LINE L1 -6 6285 6164 336 379 51 27 chr5 21155293 21155586 -178474564 + L2 LINE L2 3014 3313 0 21 23 0 47 chr5 21155662 21155684 -178474466 + AT_rich Low_complexity Low_complexity 1 22 -19 1543 184 0 4 chr5 21155684 21155951 -178474199 + AluJo SINE Alu 21 286 -26 21 23 0 47 chr5 21155951 21155971 -178474179 + AT_rich Low_complexity Low_complexity 22 41 0 27 29 0 0 chr5 21156543 21156577 -178473573 + AT_rich Low_complexity Low_complexity 1 34 0 351 0 0 0 chr5 21157135 21157174 -178472976 + (TG)n Simple_repeat Simple_repeat 1 39 0 1476 219 92 16 chr5 21157235 21157669 -178472481 - MLT1C LTR MaLR 0 467 1 393 256 20 94 chr5 21159054 21159257 -178470893 - LTR41 LTR ERVL -11 762 575 27 0 0 0 chr5 21161128 21161155 -178468995 + AT_rich Low_complexity Low_complexity 1 27 0 1877 77 4 0 chr5 21161487 21161735 -178468415 + L1PA6 LINE L1 5902 6150 -4 1930 259 99 34 chr5 21163795 21164608 -178465542 - L1M4 LINE L1 -989 5157 4268 2313 74 16 22 chr5 21164608 21164920 -178465230 - AluY SINE Alu -1 310 1 1930 259 99 34 chr5 21164920 21165089 -178465061 - L1M4 LINE L1 -1878 4268 4111 596 232 53 68 chr5 21165271 21165534 -178464616 - LTR4 LTR ERV1 -7 589 331 497 260 25 55 chr5 21165738 21165938 -178464212 - LTR4 LTR ERV1 -396 200 7 509 298 105 41 chr5 21166108 21166672 -178463478 - L1M4 LINE L1 -2579 3567 2968 * 758 282 55 42 chr5 21166668 21167126 -178463024 + L1MCa LINE L1 861 1324 -5102 241 188 25 25 chr5 21168146 21168226 -178461924 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 252 235 50 76 chr5 21168272 21168391 -178461759 - LTR28 LTR ERV1 0 1020 905 588 222 54 36 chr5 21168476 21168643 -178461507 - LTR28 LTR ERV1 -446 574 405 357 313 19 19 chr5 21168742 21168902 -178461248 - LTR1B LTR ERV1 -628 198 39 25 31 0 0 chr5 21169140 21169172 -178460978 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr5 21169337 21169369 -178460781 + AT_rich Low_complexity Low_complexity 1 32 0 280 333 0 0 chr5 21170005 21170107 -178460043 + GA-rich Low_complexity Low_complexity 2 103 0 28 0 0 0 chr5 21170950 21170978 -178459172 + AT_rich Low_complexity Low_complexity 1 28 0 1687 148 50 4 chr5 21171153 21171431 -178458719 + AluSx SINE Alu 1 291 -21 2228 253 68 15 chr5 21172748 21173532 -178456618 + MER99 DNA DNA 3 827 -1 253 322 142 27 chr5 21174275 21174458 -178455692 + MLT1J LTR MaLR 5 208 -303 318 235 61 10 chr5 21174609 21174707 -178455443 + MLT1J LTR MaLR 395 497 -14 258 322 0 11 chr5 21176176 21176266 -178453884 + MLT1J LTR MaLR 124 212 -299 3296 192 89 25 chr5 21176952 21177873 -178452277 - L1MB5 LINE L1 -8 6166 5184 1339 215 91 14 chr5 21177876 21178229 -178451921 + MLT1B LTR MaLR 11 390 0 5033 251 35 70 chr5 21178251 21180563 -178449587 - L1MB5 LINE L1 -981 5165 2935 482 218 158 57 chr5 21180591 21180940 -178449210 + L1MC5 LINE L1 7518 7901 -60 13125 147 29 28 chr5 21181726 21184141 -178446009 + Tigger1 DNA MER2_type 1 2418 0 213 267 0 27 chr5 21184141 21184216 -178445934 + (TA)n Simple_repeat Simple_repeat 2 74 0 1203 104 42 10 chr5 21184216 21184408 -178445742 - Tigger1 DNA MER2_type -140 2278 2081 436 228 89 13 chr5 21184424 21184582 -178445568 - MER3 DNA MER1_type -86 123 1 2077 116 7 3 chr5 21187952 21188262 -178441888 - AluSx SINE Alu -1 311 1 2178 84 10 13 chr5 21188276 21188575 -178441575 - AluSp SINE Alu 0 313 16 2620 52 0 0 chr5 21188963 21189273 -178440877 - AluY SINE Alu -1 310 1 6770 20 23 0 chr5 21189902 21190700 -178439450 - L1PA3 LINE L1 0 6155 5340 * 10074 31 1 2 chr5 21190690 21191941 -178438209 + L1P LINE L1 4126 5377 -779 1804 258 41 15 chr5 21192318 21192370 -178437780 + MLT1D LTR MaLR 26 75 -430 745 228 147 54 chr5 21192370 21192704 -178437446 + MLT1A1 LTR MaLR 1 365 0 1804 258 41 15 chr5 21192704 21193117 -178437033 + MLT1D LTR MaLR 75 503 -2 21 36 0 0 chr5 21194569 21194597 -178435553 + AT_rich Low_complexity Low_complexity 1 28 0 25 83 0 0 chr5 21195161 21195221 -178434929 + AT_rich Low_complexity Low_complexity 1 60 0 1963 85 72 17 chr5 21195386 21195679 -178434471 - AluY SINE Alu -2 309 1 227 371 88 24 chr5 21195728 21196057 -178434093 + L2 LINE L2 2441 2790 -524 204 39 0 118 chr5 21196365 21196416 -178433734 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 758 235 6 0 chr5 21197259 21197421 -178432729 - FRAM SINE Alu -3 163 1 273 257 162 29 chr5 21197594 21197730 -178432420 - L2 LINE L2 -1 3312 3159 1789 221 89 7 chr5 21197922 21198369 -178431781 - MLT1D LTR MaLR -1 504 21 280 247 0 14 chr5 21198481 21198554 -178431596 + GA-rich Low_complexity Low_complexity 2 73 0 25 65 0 0 chr5 21199204 21199250 -178430900 + AT_rich Low_complexity Low_complexity 1 46 0 817 288 66 35 chr5 21199262 21199359 -178430791 - Charlie7 DNA MER1_type -1320 1292 1199 958 55 40 0 chr5 21199359 21199559 -178430591 + (TAGA)n Simple_repeat Simple_repeat 1 208 0 817 288 66 35 chr5 21199559 21199855 -178430295 - Charlie7 DNA MER1_type -1413 1199 885 638 228 32 6 chr5 21199864 21200014 -178430136 + MLT1A1 LTR MaLR 228 365 0 248 361 12 0 chr5 21200028 21200111 -178430039 + L2 LINE L2 2598 2681 -633 208 200 0 40 chr5 21201147 21201197 -178428953 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 186 361 126 8 chr5 21201235 21201354 -178428796 + L2 LINE L2 3136 3268 -4 1946 107 0 11 chr5 21201594 21201855 -178428295 - AluSq SINE Alu -54 259 2 316 301 176 7 chr5 21201957 21202093 -178428057 + MIR SINE MIR 48 206 -56 2121 269 6 8 chr5 21203066 21203561 -178426589 + MER21B LTR ERV1 100 593 -270 2194 141 113 13 chr5 21203584 21203713 -178426437 + MSTA LTR MaLR 1 116 -312 1989 143 71 31 chr5 21203713 21204063 -178426087 - THE1B LTR MaLR 0 364 1 2194 141 113 13 chr5 21204063 21204322 -178425828 + MSTA LTR MaLR 116 428 0 391 232 66 137 chr5 21204328 21204569 -178425581 + MER21B LTR ERV1 613 836 -27 335 242 67 67 chr5 21205679 21205799 -178424351 + L2 LINE L2 2871 2990 -323 1001 106 0 0 chr5 21206451 21206583 -178423567 - AluSg/x SINE Alu -16 294 163 2116 92 0 34 chr5 21207624 21207759 -178422391 + AluSc SINE Alu 1 139 -170 2432 67 0 0 chr5 21207759 21208056 -178422094 + AluY SINE Alu 1 297 -14 441 0 0 0 chr5 21208058 21208107 -178422043 + (CA)n Simple_repeat Simple_repeat 2 50 0 2116 92 0 34 chr5 21208107 21208260 -178421890 + AluSc SINE Alu 140 282 -27 1886 201 28 25 chr5 21208483 21208916 -178421234 - MER101 LTR ERV1 -30 444 11 1867 182 23 11 chr5 21209044 21209395 -178420755 - MLT1A1 LTR MaLR 0 365 11 191 204 130 0 chr5 21210245 21210299 -178419851 - MIR3 SINE MIR -25 183 123 288 111 0 0 chr5 21210784 21210829 -178419321 + (TG)n Simple_repeat Simple_repeat 2 46 0 365 299 56 0 chr5 21211998 21212105 -178418045 + MIR3 SINE MIR 46 158 -50 261 325 97 26 chr5 21212114 21212268 -178417882 + MER5B DNA MER1_type 8 172 -6 190 169 0 26 chr5 21213018 21213095 -178417055 + (TA)n Simple_repeat Simple_repeat 1 75 0 228 401 20 7 chr5 21213640 21213787 -178416363 - L2 LINE L2 -2 3270 3122 816 130 20 175 chr5 21214013 21214259 -178415891 - MER2 DNA MER2_type -136 209 2 367 350 51 47 chr5 21214393 21214607 -178415543 - L2 LINE L2 -454 2860 2646 2403 116 8 30 chr5 21215702 21216074 -178414076 - THE1B LTR MaLR 0 364 1 198 296 19 0 chr5 21216569 21216623 -178413527 - L2 LINE L2 -15 3257 3203 1738 168 3 14 chr5 21217018 21217315 -178412835 + AluJb SINE Alu 1 294 -18 259 286 134 36 chr5 21217347 21217571 -178412579 - MIR SINE MIR -10 252 7 1955 152 0 20 chr5 21218113 21218416 -178411734 - AluSx SINE Alu -13 299 3 438 189 89 0 chr5 21218619 21218751 -178411399 + FLAM_A SINE Alu 21 160 0 1413 155 24 40 chr5 21219505 21219757 -178410393 - AluJo SINE Alu -32 280 33 564 280 30 6 chr5 21219865 21220033 -178410117 - L1ME1 LINE L1 -20 6146 5975 484 251 92 26 chr5 21220033 21220228 -178409922 - L2 LINE L2 -412 2902 2695 735 214 50 23 chr5 21220240 21220456 -178409694 + L1MC4a LINE L1 6401 6630 -1155 198 103 0 0 chr5 21220458 21220487 -178409663 + (TG)n Simple_repeat Simple_repeat 2 30 0 372 181 8 126 chr5 21220487 21220574 -178409576 - L1M4 LINE L1 -1587 4559 4490 1888 143 25 3 chr5 21220574 21220860 -178409290 + AluSx SINE Alu 1 292 -20 372 181 8 126 chr5 21220860 21220899 -178409251 - L1M4 LINE L1 -1656 4490 4448 273 172 0 0 chr5 21221840 21221904 -178408246 + T-rich Low_complexity Low_complexity 1 64 0 696 218 0 0 chr5 21221906 21222039 -178408111 - FLAM_C SINE Alu 0 133 1 204 177 16 48 chr5 21222347 21222409 -178407741 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2456 141 32 2 chr5 21222409 21222842 -178407308 - L1PB1 LINE L1 -8 6143 5698 1216 206 14 31 chr5 21222849 21223020 -178407130 + L1 LINE L1 3179 3342 -2804 4671 94 23 6 chr5 21223020 21223669 -178406481 - PABL_A LTR ERV1 0 660 1 1216 206 14 31 chr5 21223669 21223846 -178406304 + L1 LINE L1 3342 3521 -2625 455 245 83 52 chr5 21223893 21224162 -178405988 - LTR56 LTR ERV1 0 445 191 492 143 0 120 chr5 21224174 21224307 -178405843 + LOR1-int LTR ERV1 4360 4476 -3644 * 604 234 27 11 chr5 21224295 21224483 -178405667 - MER83B-int LTR ERV1 -1522 3358 3168 207 0 0 0 chr5 21224605 21224628 -178405522 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 876 10 0 0 chr5 21224815 21224915 -178405235 + L1PA4 LINE L1 5798 5897 -258 278 248 85 35 chr5 21224916 21225057 -178405093 + LTR36 LTR ERV1 48 195 -416 * 564 290 108 19 chr5 21225027 21225404 -178404746 + LTR38 LTR ERV1 141 602 -9 221 258 0 0 chr5 21225731 21225793 -178404357 + T-rich Low_complexity Low_complexity 1 62 0 1372 117 40 22 chr5 21225851 21225966 -178404184 + AluSg/x SINE Alu 86 197 -115 5285 90 41 9 chr5 21225966 21226722 -178403428 - LTR17 LTR ERV1 0 780 1 1372 117 40 22 chr5 21226722 21226829 -178403321 + AluSg/x SINE Alu 197 312 0 268 324 0 0 chr5 21226909 21226980 -178403170 - LTR16A LTR ERVL 0 450 380 2907 261 39 23 chr5 21226981 21227771 -178402379 + MER21B LTR ERV1 1 803 -60 2912 63 0 0 chr5 21228071 21228436 -178401714 + L1PA7 LINE L1 5776 6140 -14 1617 163 142 23 chr5 21228552 21228896 -178401254 - MSTA LTR MaLR -1 427 43 2951 154 57 45 chr5 21228896 21229498 -178400652 + MER4B LTR ERV1 1 609 -1 2987 129 143 29 chr5 21229503 21230064 -178400086 + MER4B-int LTR ERV1 1 641 -5957 204 40 0 0 chr5 21230064 21230089 -178400061 + (TG)n Simple_repeat Simple_repeat 2 26 0 2987 129 143 29 chr5 21230089 21230148 -178400002 + MER4B-int LTR ERV1 641 692 -5906 250 320 65 39 chr5 21230199 21230352 -178399798 + MER4B-int LTR ERV1 420 576 -6182 332 177 0 0 chr5 21230474 21230536 -178399614 + MER4B-int LTR ERV1 751 812 -5786 257 169 0 130 chr5 21230552 21230629 -178399521 + MER4B-int LTR ERV1 687 753 -5845 256 156 0 44 chr5 21230629 21230674 -178399476 + LTR49 LTR ERV1 271 313 -282 1380 106 59 51 chr5 21230694 21230967 -178399183 + MER4B-int LTR ERV1 993 1267 -5331 5009 196 82 52 chr5 21230984 21233269 -178396881 + MER4B-int LTR ERV1 1804 3586 -3012 2901 162 42 4 chr5 21233264 21233387 -178396763 + MER4B-int LTR ERV1 3423 3540 -3218 * 306 0 0 0 chr5 21233387 21233421 -178396729 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2901 162 42 4 chr5 21233421 21233884 -178396266 + MER4B-int LTR ERV1 3540 4088 -2670 * 9412 151 71 14 chr5 21233883 21235815 -178394335 + MER4B-int LTR ERV1 4452 6531 -227 6491 92 24 3 chr5 21235816 21238943 -178391207 - L1PA7 LINE L1 -6 6463 3263 4636 111 3 44 chr5 21238940 21239663 -178390487 - L1PA7 LINE L1 -5768 693 1 * 1541 145 4 8 chr5 21239664 21239906 -178390244 + MER4B-int LTR ERV1 6518 6758 0 3013 138 58 48 chr5 21239908 21240510 -178389640 + MER4B LTR ERV1 3 610 0 380 43 0 0 chr5 21240510 21240556 -178389594 - MSTA LTR MaLR -382 46 1 239 299 134 8 chr5 21241015 21241142 -178389008 + MIR SINE MIR 50 192 -70 258 281 85 0 chr5 21241390 21241472 -178388678 + MER117 DNA MER1_type 108 196 -1 262 292 108 31 chr5 21241604 21241734 -178388416 - MIR SINE MIR -49 213 74 596 309 40 28 chr5 21242287 21242539 -178387611 - MIR SINE MIR -6 256 2 256 298 0 53 chr5 21242541 21242635 -178387515 + MIR SINE MIR 164 252 -10 1808 162 53 48 chr5 21243473 21243649 -178386501 - L1PA16 LINE L1 -10 6156 5982 1256 207 88 14 chr5 21243649 21243934 -178386216 - AluJo SINE Alu -6 306 1 1808 162 53 48 chr5 21243934 21244133 -178386017 - L1PA16 LINE L1 -184 5982 5779 1928 149 30 0 chr5 21244459 21244760 -178385390 + AluSq SINE Alu 3 312 -1 560 299 134 0 chr5 21245014 21245238 -178384912 - LTR16C LTR ERVL -2 489 236 226 285 65 32 chr5 21245982 21246105 -178384045 - MER65B LTR ERV1 -403 128 2 25 0 0 0 chr5 21247010 21247035 -178383115 + AT_rich Low_complexity Low_complexity 1 25 0 274 319 57 25 chr5 21247332 21247489 -178382661 - MIR SINE MIR -29 233 72 944 267 73 25 chr5 21247725 21248095 -178382055 - MLT1D LTR MaLR 0 505 120 1927 119 92 9 chr5 21249963 21250291 -178379859 - THE1A LTR MaLR 0 355 1 485 255 141 47 chr5 21250816 21251114 -178379036 + L1MC4 LINE L1 6512 6837 -1205 1289 249 126 9 chr5 21251130 21251669 -178378481 + L1MC4 LINE L1 7066 7667 -375 472 266 66 80 chr5 21252259 21252609 -178377541 - L1MDa LINE L1 -3988 2552 2208 2100 248 29 29 chr5 21252689 21253282 -178376868 - MLT1E LTR MaLR 0 593 1 257 208 69 0 chr5 21253544 21253616 -178376534 + LTR67 LTR ERVL 481 557 0 1650 254 37 44 chr5 21253654 21254358 -178375792 - L1M4 LINE L1 -1979 4665 3967 741 188 0 16 chr5 21254365 21254512 -178375638 - MLT1A1 LTR MaLR -2 388 229 323 179 107 24 chr5 21254538 21254622 -178375528 - MLT1A1 LTR MaLR -337 91 1 2846 273 69 15 chr5 21254643 21256003 -178374147 - L1M4 LINE L1 -2688 3956 2561 403 304 39 88 chr5 21256089 21256477 -178373673 - L1M4 LINE L1 -4313 2512 2144 1862 228 32 94 chr5 21256647 21257441 -178372709 - L1M4 LINE L1 -4592 2054 1354 1374 217 4 7 chr5 21257441 21257722 -178372428 + AluJo SINE Alu 3 282 -30 1862 228 32 94 chr5 21257722 21258013 -178372137 - L1M4 LINE L1 -5292 1354 1046 213 178 0 0 chr5 21258027 21258072 -178372078 + (CA)n Simple_repeat Simple_repeat 2 46 0 2262 256 89 19 chr5 21258235 21258387 -178371763 + L1M4 LINE L1 2399 2539 -3607 2290 113 0 0 chr5 21258387 21258696 -178371454 - AluSq SINE Alu -4 309 1 2262 256 89 19 chr5 21258696 21259604 -178370546 + L1M4 LINE L1 2539 3533 -2613 690 265 98 38 chr5 21259722 21260069 -178370081 + L1ME3A LINE L1 5803 6170 0 24 32 0 0 chr5 21261603 21261634 -178368516 + AT_rich Low_complexity Low_complexity 1 31 0 492 225 0 0 chr5 21262013 21262142 -178368008 + CT-rich Low_complexity Low_complexity 3 131 0 977 141 0 6 chr5 21262142 21262312 -178367838 + (TTTC)n Simple_repeat Simple_repeat 1 169 0 2790 13 0 0 chr5 21262732 21263043 -178367107 - AluYa5 SINE Alu 0 311 1 22 0 0 0 chr5 21263044 21263066 -178367084 + AT_rich Low_complexity Low_complexity 1 22 0 215 235 29 20 chr5 21263898 21264000 -178366150 + (TTA)n Simple_repeat Simple_repeat 1 103 0 24 67 0 0 chr5 21264012 21264057 -178366093 + AT_rich Low_complexity Low_complexity 1 45 0 272 241 111 19 chr5 21264434 21264542 -178365608 + L1MC5 LINE L1 7270 7387 -574 467 272 122 38 chr5 21264731 21265093 -178365057 + L1MC4 LINE L1 7555 8041 -1 21 0 0 0 chr5 21265784 21265805 -178364345 + AT_rich Low_complexity Low_complexity 1 21 0 33 80 0 0 chr5 21266891 21266966 -178363184 + AT_rich Low_complexity Low_complexity 1 75 0 239 331 120 42 chr5 21267033 21267175 -178362975 - MIR3 SINE MIR -35 173 21 1935 108 14 4 chr5 21267800 21268079 -178362071 + AluSx SINE Alu 11 292 -20 916 305 124 25 chr5 21268281 21268766 -178361384 + MLT1H1 LTR MaLR 20 552 -3 732 35 0 0 chr5 21269105 21269192 -178360958 - L1PA2 LINE L1 -379 5776 5690 3240 26 0 0 chr5 21269192 21269616 -178360534 + L1PA2 LINE L1 5762 6204 0 1804 127 3 3 chr5 21269995 21270278 -178359872 - L1P4 LINE L1 -569 5594 5312 392 125 78 0 chr5 21270303 21270431 -178359719 + (TA)n Simple_repeat Simple_repeat 1 138 0 2134 138 37 11 chr5 21270438 21270793 -178359357 - THE1B LTR MaLR 0 364 1 2455 119 0 11 chr5 21270793 21271171 -178358979 + L1PA13 LINE L1 5788 6161 -2 205 302 209 0 chr5 21271246 21271332 -178358818 + MIR SINE MIR 38 141 -121 240 143 0 0 chr5 21271339 21271381 -178358769 + (TG)n Simple_repeat Simple_repeat 1 42 0 242 306 28 0 chr5 21271404 21271476 -178358674 + MIR SINE MIR 188 261 -1 425 257 0 0 chr5 21271997 21272102 -178358048 - L1MA10 LINE L1 -1 6333 6229 5310 165 19 4 chr5 21272226 21273340 -178356810 + L1PA16 LINE L1 5034 6165 -1 653 291 37 3 chr5 21273348 21273674 -178356476 - L1MCa LINE L1 -2808 4149 3813 2004 146 36 30 chr5 21273759 21274121 -178356029 - THE1B LTR MaLR 0 364 1 11209 98 10 0 chr5 21274121 21275685 -178354465 - THE1B-int LTR MaLR 0 1580 1 1643 162 65 31 chr5 21275685 21276037 -178354113 - THE1B LTR MaLR 0 364 1 1929 211 44 0 chr5 21276052 21276465 -178353685 + MSTB1 LTR MaLR 2 432 0 1749 280 98 17 chr5 21276540 21277242 -178352908 - L1M4 LINE L1 -6022 837 7 2198 231 155 30 chr5 21277249 21277643 -178352507 - L1MCa LINE L1 -3985 2972 2629 1218 121 16 0 chr5 21277643 21277825 -178352325 + L1PA10 LINE L1 5973 6157 -11 2198 231 155 30 chr5 21277825 21278093 -178352057 - L1MCa LINE L1 -4328 2629 2396 2420 56 3 3 chr5 21278093 21278396 -178351754 - AluY SINE Alu -8 303 1 2198 231 155 30 chr5 21278396 21278924 -178351226 - L1MCa LINE L1 -4561 2396 1632 1487 195 48 7 chr5 21279065 21279357 -178350793 + AluJo SINE Alu 2 305 -7 1008 347 53 34 chr5 21279800 21280368 -178349782 + HERV16 LTR ERVL 1778 2356 -2640 358 164 0 0 chr5 21280721 21280776 -178349374 - AluSg/x SINE Alu -38 262 208 731 280 56 47 chr5 21281257 21281596 -178348554 + LTR16A1 LTR ERVL 56 397 -60 565 156 0 0 chr5 21281897 21281987 -178348163 - AluSx SINE Alu -13 296 207 905 139 0 0 chr5 21281987 21282116 -178348034 - AluSx SINE Alu -184 129 1 22 0 0 0 chr5 21282184 21282206 -178347944 + AT_rich Low_complexity Low_complexity 1 22 0 327 213 0 0 chr5 21282958 21283033 -178347117 + CT-rich Low_complexity Low_complexity 3 77 0 2068 126 0 13 chr5 21283038 21283355 -178346795 - AluSq SINE Alu 0 313 1 1665 225 49 33 chr5 21283697 21284186 -178345964 + MLT1D LTR MaLR 5 501 -4 1692 150 21 67 chr5 21285809 21286136 -178344014 - AluJb SINE Alu 0 312 1 1559 158 1 110 chr5 21286495 21286921 -178343229 + L1MA9 LINE L1 5203 5586 -726 434 169 56 0 chr5 21286958 21287055 -178343095 + L1MA9 LINE L1 6176 6292 -9 1043 103 0 0 chr5 21287135 21287281 -178342869 - AluSg/x SINE Alu -2 310 165 1037 218 30 106 chr5 21287287 21287682 -178342468 - MLT1A1 LTR MaLR 0 365 1 1482 222 15 3 chr5 21287755 21288089 -178342061 - L1M4 LINE L1 -444 6238 5901 1669 249 33 22 chr5 21288243 21288883 -178341267 - L1M4 LINE L1 -4432 2393 1604 4154 262 33 39 chr5 21288893 21290288 -178339862 - L1M4 LINE L1 -4988 1554 166 1875 160 10 0 chr5 21290288 21290595 -178339555 - AluSx SINE Alu -2 310 1 4154 262 33 39 chr5 21290595 21290648 -178339502 - L1M4 LINE L1 -6376 166 114 374 369 29 35 chr5 21290768 21291115 -178339035 - ERVL LTR ERVL -1722 3932 3588 532 294 184 21 chr5 21291495 21291777 -178338373 - MLT1G1 LTR MaLR 0 595 268 280 393 34 15 chr5 21291849 21292114 -178338036 - ERVL LTR ERVL -4116 1648 1379 2286 97 7 0 chr5 21292337 21292635 -178337515 - AluSc SINE Alu -9 300 1 853 160 0 0 chr5 21292811 21292955 -178337195 - Tigger2 DNA MER2_type -107 2611 2468 261 128 0 0 chr5 21293086 21293133 -178337017 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 1306 273 73 58 chr5 21293812 21294981 -178335169 - L1ME1 LINE L1 -5 6161 4950 2040 135 0 3 chr5 21294981 21295277 -178334873 + AluSg SINE Alu 1 295 -15 1306 273 73 58 chr5 21295277 21295618 -178334532 - L1ME1 LINE L1 -1216 4950 4616 1313 252 89 21 chr5 21295650 21296078 -178334072 - MLT1C LTR MaLR -2 465 9 1641 244 45 62 chr5 21296085 21296635 -178333515 - MER77 LTR ERV1 -9 596 56 230 200 31 0 chr5 21296662 21296727 -178333423 - L1ME1 LINE L1 -1542 4604 4538 1033 153 61 57 chr5 21296739 21296911 -178333239 + L1MA9 LINE L1 6084 6259 -53 3505 216 30 49 chr5 21296911 21297787 -178332363 + MER21B LTR ERV1 1 859 -4 1033 153 61 57 chr5 21297787 21297842 -178332308 + L1MA9 LINE L1 6259 6312 0 334 214 162 26 chr5 21297913 21298067 -178332083 - L1ME1 LINE L1 -1595 4551 4377 4512 148 72 12 chr5 21298068 21298943 -178331207 + Tigger3b DNA MER2_type 1 927 -304 2227 165 26 29 chr5 21298943 21299361 -178330789 + MSTB LTR MaLR 1 417 -9 932 153 11 42 chr5 21299363 21299552 -178330598 + Tigger3b DNA MER2_type 917 1099 -132 2707 68 8 0 chr5 21299645 21299997 -178330153 + THE1A LTR MaLR 1 355 0 649 183 50 0 chr5 21299997 21300117 -178330033 + Tigger3b DNA MER2_type 1105 1230 -1 252 108 0 0 chr5 21300123 21300160 -178329990 - Tigger3b DNA MER2_type -67 1164 1128 375 339 37 37 chr5 21300296 21300485 -178329665 + MER5A DNA MER1_type 1 189 0 25 0 0 0 chr5 21300731 21300756 -178329394 + AT_rich Low_complexity Low_complexity 1 25 0 225 178 0 0 chr5 21302374 21302419 -178327731 + (TA)n Simple_repeat Simple_repeat 1 45 0 2277 151 8 16 chr5 21303180 21303558 -178326592 - THE1C LTR MaLR 0 375 1 201 209 0 0 chr5 21305113 21305156 -178324994 - L2 LINE L2 -8 3305 3263 215 380 43 11 chr5 21305773 21305865 -178324285 + MIR SINE MIR 2 96 -166 4832 113 10 10 chr5 21306269 21306996 -178323154 - L1PA10 LINE L1 -18 6150 5424 6939 112 7 16 chr5 21307096 21307162 -178322988 - L1PA10 LINE L1 -759 5387 5322 2210 101 7 0 chr5 21307162 21307449 -178322701 - AluSx SINE Alu -17 295 7 6939 112 7 16 chr5 21307449 21308475 -178321675 - L1PA10 LINE L1 -824 5322 4305 29 47 0 0 chr5 21309450 21309493 -178320657 + AT_rich Low_complexity Low_complexity 1 43 0 246 269 103 0 chr5 21309636 21309714 -178320436 - MIR SINE MIR -58 204 119 201 343 57 0 chr5 21310055 21310125 -178320025 - MER5B DNA MER1_type -104 74 1 2226 116 0 0 chr5 21310443 21310745 -178319405 - AluSg1 SINE Alu -7 302 1 1299 238 134 47 chr5 21311949 21312457 -178317693 - MLT1E3 LTR MaLR -1 623 72 301 316 38 30 chr5 21313516 21313649 -178316501 - L1MB7 LINE L1 -15 6169 6036 2526 231 26 10 chr5 21313723 21314419 -178315731 - L1ME1 LINE L1 -222 5944 5304 762 157 101 6 chr5 21314425 21314584 -178315566 + MLT1D LTR MaLR 140 313 -192 322 320 81 6 chr5 21314602 21314774 -178315376 + MER5A DNA MER1_type 4 188 -1 360 337 87 17 chr5 21315182 21315354 -178314796 + MER5A DNA MER1_type 6 189 0 531 335 58 29 chr5 21316341 21316616 -178313534 - MLT1J LTR MaLR -224 287 5 1012 98 0 0 chr5 21317422 21317554 -178312596 - AluY SINE Alu -179 132 1 22 56 0 0 chr5 21317671 21317707 -178312443 + AT_rich Low_complexity Low_complexity 1 36 0 382 224 82 34 chr5 21318567 21318714 -178311436 + L2 LINE L2 732 885 -2429 269 188 0 31 chr5 21319190 21319254 -178310896 - L1MB8 LINE L1 -9 6169 6108 2554 59 0 3 chr5 21319710 21320017 -178310133 + AluY SINE Alu 1 306 -5 264 115 213 16 chr5 21320087 21320148 -178310002 - MER70A LTR ERVL 0 472 400 1997 247 36 0 chr5 21320153 21320574 -178309576 - MER70A LTR ERVL -36 436 1 7183 158 20 3 chr5 21320596 21321807 -178308343 + Tigger1 DNA MER2_type 1 1231 -1187 417 226 57 0 chr5 21321909 21322015 -178308135 - MIR SINE MIR -120 142 31 2629 51 0 3 chr5 21323060 21323372 -178306778 - AluY SINE Alu 0 311 1 9271 69 5 15 chr5 21323998 21324814 -178305336 - L1PA3 LINE L1 0 6155 5333 2210 101 7 0 chr5 21324814 21325101 -178305049 - AluSx SINE Alu -17 295 7 9271 69 5 15 chr5 21325101 21326309 -178303841 - L1P1 LINE L1 -822 5333 4126 1981 21 0 0 chr5 21326309 21326543 -178303607 + L1P1 LINE L1 5350 5583 -572 257 242 0 0 chr5 21326719 21326785 -178303365 + (TA)n Simple_repeat Simple_repeat 2 67 0 6158 160 25 0 chr5 21326789 21327856 -178302294 + Tigger1 DNA MER2_type 1325 2418 0 21 0 0 0 chr5 21328355 21328376 -178301774 + AT_rich Low_complexity Low_complexity 1 21 0 475 222 81 45 chr5 21329468 21329666 -178300484 + MER3 DNA MER1_type 5 209 0 763 268 68 19 chr5 21329809 21330074 -178300076 + LTR16C LTR ERVL 143 420 -71 279 262 131 0 chr5 21330123 21330207 -178299943 + MER3 DNA MER1_type 1 95 -114 191 348 22 22 chr5 21330356 21330448 -178299702 + L2 LINE L2 3181 3272 0 1128 139 19 48 chr5 21330897 21331106 -178299044 - THE1C LTR MaLR 0 375 173 8446 138 22 43 chr5 21331111 21331713 -178298437 - THE1C-int LTR MaLR -121 1459 845 2339 76 7 7 chr5 21331713 21332015 -178298135 - AluY SINE Alu -9 302 1 8446 138 22 43 chr5 21332015 21332844 -178297306 - THE1C-int LTR MaLR -735 845 59 2016 143 62 11 chr5 21332881 21333238 -178296912 - THE1C LTR MaLR 0 375 1 24 67 0 0 chr5 21333292 21333337 -178296813 + AT_rich Low_complexity Low_complexity 1 45 0 300 306 61 66 chr5 21333365 21333561 -178296589 - LTR33 LTR ERVL -23 498 304 789 163 75 0 chr5 21334027 21334174 -178295976 + AluSg/x SINE Alu 139 296 -13 1987 106 67 0 chr5 21334285 21334568 -178295582 + AluSg1 SINE Alu 1 302 -7 1886 88 0 0 chr5 21336075 21336315 -178293835 - AluSq SINE Alu 0 313 74 718 233 0 28 chr5 21439088 21439268 -178190882 - FRAM SINE Alu -1 175 1 2227 64 4 0 chr5 21439301 21439616 -178190534 + AluY SINE Alu 1 316 0 231 200 0 0 chr5 21441130 21441175 -178188975 + GA-rich Low_complexity Low_complexity 1 45 0 226 288 75 12 chr5 21441832 21441912 -178188238 + L2 LINE L2 3188 3272 0 372 289 7 27 chr5 21442966 21443115 -178187035 + MER113 DNA MER1_type? 225 370 -151 235 149 21 0 chr5 21443163 21443210 -178186940 - LTR66 LTR ERVL -171 439 392 200 184 0 0 chr5 21443210 21443248 -178186902 + CT-rich Low_complexity Low_complexity 1 38 0 337 270 214 8 chr5 21443260 21443386 -178186764 + MER5A DNA MER1_type 9 160 -29 354 213 0 43 chr5 21443401 21443495 -178186655 + MER113 DNA MER1_type? 358 447 -74 655 229 77 11 chr5 21443507 21443690 -178186460 + MER3 DNA MER1_type 10 204 -5 721 307 81 81 chr5 21443936 21444603 -178185547 + HAL1 LINE L1 25 691 -1816 769 289 140 65 chr5 21444618 21445366 -178184784 + HAL1 LINE L1 1080 1924 -583 1550 179 13 47 chr5 21445366 21445684 -178184466 + AluJo SINE Alu 6 312 0 769 289 140 65 chr5 21445684 21445943 -178184207 + HAL1 LINE L1 1924 2162 -345 276 287 89 20 chr5 21446235 21446336 -178183814 - L2 LINE L2 -13 3300 3193 438 329 109 40 chr5 21446488 21446865 -178183285 + L2 LINE L2 2910 3312 -1 21 36 0 0 chr5 21446973 21447001 -178183149 + AT_rich Low_complexity Low_complexity 1 28 0 738 152 0 35 chr5 21447701 21447846 -178182304 - FLAM_C SINE Alu -1 142 3 287 286 134 0 chr5 21448725 21448844 -178181306 + MIR SINE MIR 108 242 -20 226 304 64 56 chr5 21449483 21449608 -178180542 - MLT1H LTR MaLR -387 162 37 21 0 0 0 chr5 21449788 21449809 -178180341 + AT_rich Low_complexity Low_complexity 1 21 0 759 305 65 21 chr5 21451054 21451392 -178178758 - MLT1K LTR MaLR 0 588 236 234 244 233 0 chr5 21453501 21453591 -178176559 + MER5B DNA MER1_type 1 111 -67 1600 135 42 45 chr5 21453591 21453712 -178176438 - MER39B LTR ERV1 -366 287 167 1938 163 0 0 chr5 21453712 21454012 -178176138 - AluSx SINE Alu -10 302 3 1600 135 42 45 chr5 21454012 21454178 -178175972 - MER39B LTR ERV1 -486 167 1 32 75 0 0 chr5 21454436 21454503 -178175647 + AT_rich Low_complexity Low_complexity 1 67 0 1455 192 10 30 chr5 21454558 21454855 -178175295 - AluJb SINE Alu -21 291 1 251 154 0 19 chr5 21455328 21455380 -178174770 + (CATA)n Simple_repeat Simple_repeat 3 53 0 1770 178 51 3 chr5 21455402 21455734 -178174416 - MLT2C1 LTR ERVL -49 348 1 387 0 0 0 chr5 21456694 21456737 -178173413 + (TG)n Simple_repeat Simple_repeat 2 44 0 358 264 160 0 chr5 21458114 21458258 -178171892 - MER5B DNA MER1_type 0 178 12 835 236 72 10 chr5 21458639 21458932 -178171218 + LTR37A LTR ERV1 112 422 -4 2083 123 35 30 chr5 21459277 21459650 -178170500 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr5 21460177 21460212 -178169938 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 21460620 21460641 -178169509 + AT_rich Low_complexity Low_complexity 1 21 0 307 221 59 73 chr5 21461003 21461139 -178169011 - L2 LINE L2 0 3313 3180 1989 78 25 3 chr5 21461260 21461593 -178168557 + L1PA7 LINE L1 5848 6186 0 225 169 0 0 chr5 21463835 21463894 -178166256 + (TA)n Simple_repeat Simple_repeat 2 60 0 297 383 17 0 chr5 21464096 21464216 -178165934 - L3 LINE CR1 -4 1573 1452 1908 111 44 0 chr5 21465154 21465464 -178164686 + AluSq SINE Alu 1 322 0 212 210 0 32 chr5 21465920 21465982 -178164168 + A-rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr5 21466448 21466470 -178163680 + AT_rich Low_complexity Low_complexity 1 22 0 1877 293 161 56 chr5 21467571 21468205 -178161945 - L2 LINE L2 -1680 1634 1068 1864 139 10 26 chr5 21468205 21468515 -178161635 + AluSx SINE Alu 1 305 -7 1877 293 161 56 chr5 21468515 21468690 -178161460 - L2 LINE L2 -2246 1068 913 2214 90 0 10 chr5 21468690 21468991 -178161159 + AluY SINE Alu 1 298 -13 1877 293 161 56 chr5 21468991 21469489 -178160661 - L2 LINE L2 -2401 913 188 2872 101 10 2 chr5 21470043 21470438 -178159712 - MER1A DNA MER1_type 0 529 132 1748 137 7 11 chr5 21470442 21470720 -178159430 - AluJb SINE Alu -34 278 2 222 284 84 0 chr5 21471423 21471518 -178158632 + MIR SINE MIR 160 262 0 218 344 21 21 chr5 21471532 21471628 -178158522 + MIR3 SINE MIR 60 155 -53 198 0 0 0 chr5 21473488 21473510 -178156640 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 271 137 0 4 chr5 21473521 21473727 -178156423 + AluSc SINE Alu 1 291 -8 23 0 0 0 chr5 21474096 21474119 -178156031 + AT_rich Low_complexity Low_complexity 1 23 0 285 51 0 0 chr5 21475008 21475047 -178155103 + (CA)n Simple_repeat Simple_repeat 2 40 0 1154 128 37 11 chr5 21475053 21475241 -178154909 + MSTA LTR MaLR 6 198 -230 250 323 65 0 chr5 21475293 21475417 -178154733 + L1MC/D LINE L1 5742 5873 -1935 208 281 0 0 chr5 21475514 21475571 -178154579 + (TG)n Simple_repeat Simple_repeat 2 58 0 214 237 0 0 chr5 21475641 21475679 -178154471 + polypyrimidine Low_complexity Low_complexity 5 42 0 2262 88 0 0 chr5 21475683 21475988 -178154162 - AluY SINE Alu -6 305 1 185 156 0 22 chr5 21476005 21476050 -178154100 + CT-rich Low_complexity Low_complexity 2 45 0 27 62 0 0 chr5 21476168 21476216 -178153934 + AT_rich Low_complexity Low_complexity 1 48 0 5273 117 25 5 chr5 21476361 21477197 -178152953 - L1MA3 LINE L1 0 6305 5453 252 370 19 9 chr5 21477315 21477423 -178152727 - L2 LINE L2 -6 3307 3199 1584 169 41 41 chr5 21477568 21477930 -178152220 + THE1B LTR MaLR 1 362 -2 1379 228 206 21 chr5 21478539 21479118 -178151032 + MER76 LTR ERV 1 686 -2 242 357 101 34 chr5 21479199 21479437 -178150713 - L2 LINE L2 -31 3282 3029 374 43 58 0 chr5 21479583 21479652 -178150498 + (TA)n Simple_repeat Simple_repeat 1 73 0 288 320 34 7 chr5 21479863 21480010 -178150140 + L1ME LINE L1 5669 5819 -302 22 35 0 0 chr5 21480119 21480148 -178150002 + AT_rich Low_complexity Low_complexity 1 29 0 1712 158 61 0 chr5 21480841 21480961 -178149189 + AluSx SINE Alu 1 112 -200 183 42 0 0 chr5 21480961 21480985 -178149165 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1712 158 61 0 chr5 21480985 21481143 -178149007 + AluSx SINE Alu 112 296 -16 252 130 0 0 chr5 21481716 21481762 -178148388 + (TC)n Simple_repeat Simple_repeat 1 46 0 1035 222 46 24 chr5 21482797 21483236 -178146914 + MLT1D LTR MaLR 1 505 0 369 0 0 0 chr5 21483250 21483291 -178146859 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 95 0 0 chr5 21483363 21483426 -178146724 + AT_rich Low_complexity Low_complexity 1 63 0 186 275 0 0 chr5 21483482 21483562 -178146588 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 1988 128 52 30 chr5 21483785 21484152 -178145998 + THE1C LTR MaLR 1 375 0 457 256 16 8 chr5 21484679 21484800 -178145350 - MER45A DNA AcHobo 0 178 57 236 277 0 60 chr5 21484956 21485039 -178145111 - MIR3 SINE MIR -17 191 114 23 0 0 0 chr5 21485428 21485451 -178144699 + AT_rich Low_complexity Low_complexity 1 23 0 2659 256 81 34 chr5 21485914 21486043 -178144107 + L1MDa LINE L1 1023 1145 -5395 2184 122 6 3 chr5 21486043 21486354 -178143796 + AluSx SINE Alu 1 312 0 2659 256 81 34 chr5 21486354 21487503 -178142647 + L1MDa LINE L1 1145 2360 -4180 1228 189 31 22 chr5 21487520 21487747 -178142403 + Tigger3b DNA MER2_type 1 229 -1002 1963 156 30 24 chr5 21487747 21488118 -178142032 + THE1C LTR MaLR 1 373 -2 6743 141 33 19 chr5 21488120 21489619 -178140531 + THE1C-int LTR MaLR 1 1580 0 2069 166 11 21 chr5 21489619 21489998 -178140152 + THE1C LTR MaLR 1 375 0 4874 165 41 17 chr5 21489998 21490115 -178140035 + Tigger3b DNA MER2_type 225 338 -2690 2125 58 0 0 chr5 21490115 21490372 -178139778 + AluY SINE Alu 47 303 -8 4874 165 41 17 chr5 21490372 21491232 -178138918 + Tigger3b DNA MER2_type 338 1225 -6 748 202 60 5 chr5 21491236 21491454 -178138696 + L1MDa LINE L1 2377 2606 -3934 23 0 0 0 chr5 21491511 21491534 -178138616 + AT_rich Low_complexity Low_complexity 1 23 0 2156 91 0 7 chr5 21491653 21491987 -178138163 - AluY SINE Alu 0 332 1 189 0 0 0 chr5 21492145 21492166 -178137984 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1493 118 93 89 chr5 21492168 21492448 -178137702 - AluSx SINE Alu -31 281 1 259 311 104 15 chr5 21492890 21493025 -178137125 + MIR SINE MIR 13 159 -103 2681 204 72 54 chr5 21493634 21494394 -178135756 + MER4E LTR ERV1 1 774 -5 249 323 120 15 chr5 21496017 21496150 -178134000 - MIR SINE MIR -56 206 60 22 88 0 0 chr5 21496173 21496230 -178133920 + AT_rich Low_complexity Low_complexity 1 57 0 548 323 72 43 chr5 21496790 21497208 -178132942 + L1MEd LINE L1 668 1097 -5022 28 0 0 0 chr5 21497612 21497640 -178132510 + AT_rich Low_complexity Low_complexity 1 28 0 6357 174 11 14 chr5 21497813 21498831 -178131319 - L1PA14 LINE L1 0 6161 5141 2078 120 38 27 chr5 21498831 21499199 -178130951 + THE1C LTR MaLR 1 372 -3 6357 174 11 14 chr5 21499199 21500257 -178129893 - L1PA14 LINE L1 -1020 5141 4088 2983 187 20 16 chr5 21500257 21500528 -178129622 + L1P LINE L1 2121 2390 -3756 2190 88 0 57 chr5 21500528 21500846 -178129304 + AluSc SINE Alu 1 300 -9 2983 187 20 16 chr5 21500846 21501184 -178128966 + L1P LINE L1 2390 2732 -3414 243 88 0 0 chr5 21501601 21501635 -178128515 + (CA)n Simple_repeat Simple_repeat 2 35 0 316 297 42 0 chr5 21501692 21501810 -178128340 - L1ME2 LINE L1 -16 6148 6026 928 260 35 22 chr5 21501816 21502182 -178127968 - L1MEc LINE L1 -3373 3009 2639 353 278 52 48 chr5 21502211 21502374 -178127776 - L1MEc LINE L1 -3959 2604 2438 1474 202 33 50 chr5 21502374 21502770 -178127380 + MLT1B LTR MaLR 2 390 0 353 278 52 48 chr5 21502770 21502854 -178127296 - L1MEc LINE L1 -4125 2438 2356 292 333 62 24 chr5 21502999 21503368 -178126782 - L1MEc LINE L1 -4899 1381 999 339 309 13 34 chr5 21503393 21503542 -178126608 - L1MEc LINE L1 -5477 1086 941 344 39 0 20 chr5 21503994 21504045 -178126105 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 688 225 0 12 chr5 21504047 21504207 -178125943 - L1PA16 LINE L1 -10 6156 5999 427 154 26 0 chr5 21504212 21504290 -178125860 + L1P LINE L1 5141 5220 -926 29 0 0 0 chr5 21505465 21505494 -178124656 + AT_rich Low_complexity Low_complexity 1 29 0 186 171 0 0 chr5 21507040 21507081 -178123069 + T-rich Low_complexity Low_complexity 1 41 0 877 219 128 0 chr5 21507187 21507383 -178122767 - MER58A DNA MER1_type -3 221 1 374 278 46 9 chr5 21507390 21507498 -178122652 + L2 LINE L2 3188 3299 -14 338 346 81 11 chr5 21509128 21509313 -178120837 - MIR SINE MIR -13 249 52 431 319 78 71 chr5 21509415 21509648 -178120502 + MLT1F-int LTR MaLR 961 1200 -171 2777 103 2 7 chr5 21509648 21510056 -178120094 + L1PA10 LINE L1 5763 6168 0 431 319 78 71 chr5 21510056 21510230 -178119920 + MLT1F-int LTR MaLR 1200 1371 0 548 237 135 70 chr5 21510231 21510592 -178119558 + MLT1F LTR MaLR 2 443 -99 1417 277 36 11 chr5 21510667 21511137 -178119013 + L1MC4 LINE L1 7350 7831 -211 2112 151 0 0 chr5 21511458 21511770 -178118380 + AluSx SINE Alu 1 312 0 21 0 0 0 chr5 21513798 21513819 -178116331 + AT_rich Low_complexity Low_complexity 1 21 0 1280 201 29 42 chr5 21513821 21514134 -178116016 + AluJo SINE Alu 1 309 -3 23 0 0 0 chr5 21515226 21515249 -178114901 + AT_rich Low_complexity Low_complexity 1 23 0 183 222 0 0 chr5 21516295 21516340 -178113810 + GA-rich Low_complexity Low_complexity 2 46 0 30 45 0 0 chr5 21517333 21517377 -178112773 + AT_rich Low_complexity Low_complexity 1 44 0 183 204 0 0 chr5 21517403 21517457 -178112693 + (TA)n Simple_repeat Simple_repeat 1 54 0 22 35 0 0 chr5 21517465 21517494 -178112656 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 21517748 21517773 -178112377 + AT_rich Low_complexity Low_complexity 1 25 0 2089 115 0 3 chr5 21519047 21519343 -178110807 - AluSq SINE Alu -18 295 1 259 286 0 17 chr5 21519371 21519490 -178110660 + (TA)n Simple_repeat Simple_repeat 2 118 0 221 250 19 0 chr5 21519630 21519682 -178110468 + (TG)n Simple_repeat Simple_repeat 2 54 0 2667 7 0 0 chr5 21520722 21521022 -178109128 - L1P1 LINE L1 -536 5619 5320 272 0 0 0 chr5 21521022 21521061 -178109089 + L1PA2 LINE L1 6116 6154 -1 209 135 0 27 chr5 21521062 21521099 -178109051 + (TA)n Simple_repeat Simple_repeat 2 37 0 1423 194 56 18 chr5 21522590 21522874 -178107276 - AluJb SINE Alu -7 295 1 1462 251 82 24 chr5 21522897 21523348 -178106802 + MLT2B1 LTR ERVL 3 479 -41 284 216 0 8 chr5 21523351 21523485 -178106665 + (TA)n Simple_repeat Simple_repeat 1 133 0 202 227 15 0 chr5 21523497 21523563 -178106587 + (TA)n Simple_repeat Simple_repeat 2 68 0 405 296 53 15 chr5 21523937 21524201 -178105949 - HAL1 LINE L1 -698 1809 1536 250 319 22 29 chr5 21524437 21524575 -178105575 - HAL1 LINE L1 -1120 1387 1251 226 348 65 36 chr5 21524927 21525065 -178105085 - HAL1 LINE L1 -1599 908 767 262 291 187 0 chr5 21525718 21525852 -178104298 - L1MC4 LINE L1 -91 7951 7793 21 0 0 0 chr5 21528040 21528061 -178102089 + AT_rich Low_complexity Low_complexity 1 21 0 2352 97 0 0 chr5 21529111 21529422 -178100728 + AluSx SINE Alu 2 312 0 255 286 0 0 chr5 21529990 21530053 -178100097 + GA-rich Low_complexity Low_complexity 3 65 0 368 357 19 13 chr5 21531236 21531393 -178098757 + MIR SINE MIR 17 174 -88 534 280 43 33 chr5 21531554 21531765 -178098385 - MIR SINE MIR -16 246 34 295 168 56 0 chr5 21532387 21532530 -178097620 + (TA)n Simple_repeat Simple_repeat 1 151 0 21 36 0 0 chr5 21532890 21532918 -178097232 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 21533447 21533470 -178096680 + AT_rich Low_complexity Low_complexity 1 23 0 1531 164 65 44 chr5 21533765 21534132 -178096018 - THE1C LTR MaLR 0 375 1 1408 253 91 32 chr5 21534351 21534814 -178095336 + MLT1E2 LTR MaLR 137 626 0 3171 89 269 0 chr5 21535650 21536192 -178093958 + LTR12 LTR ERV1 1 688 0 659 214 91 0 chr5 21586504 21586575 -178043575 - L1MA9 LINE L1 -73 6239 6176 192 77 0 0 chr5 21586575 21586601 -178043549 + (TG)n Simple_repeat Simple_repeat 1 26 0 659 214 91 0 chr5 21586601 21586716 -178043434 - L1MA9 LINE L1 -136 6176 6036 1361 115 19 0 chr5 21586945 21587180 -178042970 + L1PA7 LINE L1 5932 6170 0 2192 104 0 7 chr5 21587180 21587479 -178042671 + AluSx SINE Alu 1 297 -15 2299 136 24 56 chr5 21588121 21588426 -178041724 - LTR23 LTR ERV1 0 437 149 2183 110 3 3 chr5 21588426 21588727 -178041423 + AluSg SINE Alu 1 301 -9 2299 136 24 56 chr5 21588727 21588871 -178041279 - LTR23 LTR ERV1 -288 149 2 24 32 0 0 chr5 21588910 21588941 -178041209 + AT_rich Low_complexity Low_complexity 1 31 0 499 162 43 17 chr5 21589240 21589357 -178040793 + L1MD1 LINE L1 6108 6227 -15 229 257 27 0 chr5 21589443 21589517 -178040633 + (TTTA)n Simple_repeat Simple_repeat 2 77 0 207 295 137 42 chr5 21589719 21589814 -178040336 - L2 LINE L2 0 3272 3169 366 245 107 71 chr5 21589970 21590166 -178039984 - MER20 DNA MER1_type -16 203 1 382 242 29 117 chr5 21590373 21590458 -178039692 - L2 LINE L2 -523 2791 2700 517 266 9 0 chr5 21590458 21590571 -178039579 - MER81 DNA DNA 0 114 1 382 242 29 117 chr5 21590571 21590600 -178039550 - L2 LINE L2 -614 2700 2670 2095 166 34 0 chr5 21590600 21590979 -178039171 + L1PB3 LINE L1 5763 6154 0 382 242 29 117 chr5 21590979 21591103 -178039047 - L2 LINE L2 -644 2670 2573 285 292 183 7 chr5 21591107 21591244 -178038906 - L2 LINE L2 -956 2358 2198 1361 214 84 25 chr5 21591244 21591600 -178038550 + MLT1B LTR MaLR 1 377 -13 2181 75 9 40 chr5 21591950 21592271 -178037879 - AluY SINE Alu 0 311 1 184 337 145 24 chr5 21592358 21592607 -178037543 - L2 LINE L2 -1841 1473 1195 2038 121 0 0 chr5 21594066 21594346 -178035804 + AluSx SINE Alu 21 300 -12 196 231 26 0 chr5 21594413 21594491 -178035659 + (TA)n Simple_repeat Simple_repeat 2 81 0 249 228 6 51 chr5 21596709 21596867 -178033283 + GA-rich Low_complexity Low_complexity 6 156 0 242 309 9 27 chr5 21597607 21597717 -178032433 - MLT1I LTR MaLR -1 408 301 4371 10 4 0 chr5 21598055 21598558 -178031592 + L1PA2 LINE L1 5650 6154 -1 21 0 0 0 chr5 21598630 21598651 -178031499 + AT_rich Low_complexity Low_complexity 1 21 0 252 59 0 0 chr5 21599423 21599457 -178030693 + (ATG)n Simple_repeat Simple_repeat 2 35 0 34 24 0 0 chr5 21601491 21601532 -178028618 + AT_rich Low_complexity Low_complexity 1 41 0 197 239 75 45 chr5 21601725 21601792 -178028358 - MIR SINE MIR 0 262 194 1540 97 5 0 chr5 21602776 21602993 -178027157 + L1PA8 LINE L1 5953 6170 -2 1043 143 0 0 chr5 21604359 21604544 -178025606 - AluSg/x SINE Alu 0 316 132 535 279 9 92 chr5 21604544 21604773 -178025377 - MIR SINE MIR -50 212 3 1997 113 0 55 chr5 21605239 21605567 -178024583 + AluSp SINE Alu 1 310 -3 7133 42 0 1 chr5 21607094 21607959 -178022191 - L1PA5 LINE L1 -13 6141 5278 * 17151 79 5 2 chr5 21607958 21610793 -178019357 + L1PA7 LINE L1 3019 5858 -296 1526 244 135 37 chr5 21611126 21611666 -178018484 - MLT1E LTR MaLR 0 593 1 320 308 7 28 chr5 21611705 21611848 -178018302 + GA-rich Low_complexity Low_complexity 4 143 0 225 236 158 47 chr5 21612363 21612490 -178017660 + MIR SINE MIR 113 253 -9 344 284 92 0 chr5 21612691 21612800 -178017350 - L2 LINE L2 -1 3312 3194 32 43 0 0 chr5 21612849 21612895 -178017255 + AT_rich Low_complexity Low_complexity 1 46 0 32 91 0 0 chr5 21614231 21614319 -178015831 + AT_rich Low_complexity Low_complexity 1 88 0 2482 47 3 0 chr5 21614327 21614625 -178015525 + AluY SINE Alu 1 299 -12 28 61 0 0 chr5 21614652 21614701 -178015449 + AT_rich Low_complexity Low_complexity 1 49 0 549 237 0 0 chr5 21615802 21615916 -178014234 + FLAM_A SINE Alu 22 135 -7 341 348 82 44 chr5 21616032 21616397 -178013753 + HAL1 LINE L1 1323 1701 -806 1549 239 74 69 chr5 21616405 21616971 -178013179 + L1MA8 LINE L1 23 591 -6439 1169 293 21 24 chr5 21617025 21617557 -178012593 + L1MA8 LINE L1 1864 2393 -4644 7404 178 67 38 chr5 21617566 21619429 -178010721 + L1MA8 LINE L1 4258 6065 -1261 190 0 67 0 chr5 21619429 21619459 -178010691 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 7404 178 67 38 chr5 21619459 21619506 -178010644 + L1MA8 LINE L1 6065 6109 -1217 228 35 0 0 chr5 21619506 21619535 -178010615 + (CA)n Simple_repeat Simple_repeat 2 30 0 7404 178 67 38 chr5 21619535 21619733 -178010417 + L1MA8 LINE L1 6109 6300 -1026 1718 189 70 57 chr5 21619733 21620273 -178009877 + LTR10B LTR ERV1 1 547 0 7404 178 67 38 chr5 21620273 21621052 -178009098 + L1MA8 LINE L1 6300 7326 0 1966 156 116 0 chr5 21621104 21621509 -178008641 - LTR47A LTR ERVL 0 452 1 2045 174 65 55 chr5 21621576 21622082 -178008068 + MER67D LTR ERV1 1 511 -3 306 275 107 34 chr5 21622275 21622537 -178007613 + L1ME LINE L1 5542 5822 -299 27 49 0 0 chr5 21622992 21623033 -178007117 + AT_rich Low_complexity Low_complexity 1 41 0 2181 89 9 16 chr5 21623833 21624180 -178005970 - AluSp SINE Alu 0 313 1 21 36 0 0 chr5 21624807 21624835 -178005315 + AT_rich Low_complexity Low_complexity 1 28 0 37 39 0 0 chr5 21624967 21625018 -178005132 + AT_rich Low_complexity Low_complexity 1 51 0 194 233 17 0 chr5 21625068 21625128 -178005022 + (TATATG)n Simple_repeat Simple_repeat 3 63 0 242 260 82 14 chr5 21625818 21625891 -178004259 - L2 LINE L2 -11 3302 3225 516 323 37 28 chr5 21625895 21626282 -178003868 - L2 LINE L2 -246 3067 2681 196 260 0 0 chr5 21628139 21628189 -178001961 - L2 LINE L2 0 3313 3264 1398 172 0 119 chr5 21628487 21628830 -178001320 - AluSg SINE Alu -8 302 1 285 51 0 0 chr5 21628871 21628910 -178001240 + (GA)n Simple_repeat Simple_repeat 1 39 0 208 354 124 31 chr5 21629245 21629406 -178000744 - L2 LINE L2 -847 2467 2292 483 258 86 38 chr5 21632301 21632510 -177997640 - LTR16A LTR ERVL -95 355 137 311 113 19 0 chr5 21633211 21633264 -177996886 + GA-rich Low_complexity Low_complexity 1 54 0 278 269 255 14 chr5 21633376 21633521 -177996629 + MIR SINE MIR 81 260 -2 311 294 29 10 chr5 21634331 21634433 -177995717 + L2 LINE L2 3208 3311 -2 2578 48 0 3 chr5 21634738 21635047 -177995103 - AluY SINE Alu -3 308 1 2516 39 0 3 chr5 21635515 21635821 -177994329 - AluY SINE Alu -6 305 1 22 0 0 0 chr5 21636574 21636596 -177993554 + AT_rich Low_complexity Low_complexity 1 22 0 354 80 0 0 chr5 21636715 21636765 -177993385 + (TG)n Simple_repeat Simple_repeat 1 50 0 8477 205 39 90 chr5 21638722 21639755 -177990395 + L1MA2 LINE L1 14 1098 -6467 2184 105 17 0 chr5 21639755 21640049 -177990101 + AluSc SINE Alu 1 299 -10 8477 205 39 90 chr5 21640049 21641716 -177988434 + L1MA2 LINE L1 1098 2912 -4653 6510 93 1 0 chr5 21641716 21642769 -177987381 + L1PA8 LINE L1 5106 6159 -13 8477 205 39 90 chr5 21642769 21642805 -177987345 + L1MA2 LINE L1 2912 2948 -4617 7643 172 62 9 chr5 21642775 21644469 -177985681 + L1MA2 LINE L1 4914 6518 -1205 * 2280 105 19 40 chr5 21644469 21644641 -177985509 + THE1B LTR MaLR 1 175 -189 1815 120 0 0 chr5 21644641 21644900 -177985250 + AluY SINE Alu 51 309 -2 2280 105 19 40 chr5 21644900 21645099 -177985051 + THE1B LTR MaLR 175 364 0 11152 104 7 2 chr5 21645099 21646672 -177983478 + THE1B-int LTR MaLR 1 1580 0 2060 148 22 22 chr5 21646672 21647036 -177983114 + THE1B LTR MaLR 1 364 0 7643 172 62 9 chr5 21647036 21648000 -177982150 + L1MA2 LINE L1 6517 7716 -7 1378 244 107 32 chr5 21648038 21648477 -177981673 + MLT1E LTR MaLR 113 584 -9 277 295 86 19 chr5 21648608 21648713 -177981437 + MIR SINE MIR 99 210 -52 195 162 0 0 chr5 21649236 21649273 -177980877 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2358 70 3 3 chr5 21649532 21649830 -177980320 + AluY SINE Alu 1 298 -13 460 196 0 11 chr5 21650537 21650629 -177979521 + FLAM_A SINE Alu 47 137 -5 1200 183 82 63 chr5 21651193 21651560 -177978590 - MLT1A2 LTR MaLR 0 374 1 475 106 12 12 chr5 21651794 21651879 -177978271 + (TCCC)n Simple_repeat Simple_repeat 2 86 0 * 655 121 54 12 chr5 21651870 21652036 -177978114 + CT-rich Low_complexity Low_complexity 1 173 0 324 64 0 0 chr5 21652036 21652155 -177977995 + (TCTG)n Simple_repeat Simple_repeat 1 119 0 1875 150 0 19 chr5 21652083 21652108 -177978042 - AluSx SINE Alu -5 307 283 324 64 0 0 chr5 21652108 21652155 -177977995 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 1875 150 0 19 chr5 21652155 21652442 -177977708 - AluSx SINE Alu -29 283 1 426 20 0 0 chr5 21652571 21652622 -177977528 + (CA)n Simple_repeat Simple_repeat 2 52 0 351 0 0 0 chr5 21652621 21652660 -177977490 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 2254 61 0 4 chr5 21652721 21652998 -177977152 - AluY SINE Alu -20 291 16 623 342 48 58 chr5 21654363 21654778 -177975372 - L3 LINE CR1 -476 1101 691 22 35 0 0 chr5 21654827 21654856 -177975294 + AT_rich Low_complexity Low_complexity 1 29 0 314 65 65 0 chr5 21654860 21654906 -177975244 + MADE1 DNA Mariner 1 49 -31 356 354 65 65 chr5 21654930 21655119 -177975031 - L3 LINE CR1 -1023 554 363 2178 120 0 7 chr5 21655119 21655419 -177974731 + AluSx SINE Alu 3 300 -12 356 354 65 65 chr5 21655419 21655599 -177974551 - L3 LINE CR1 -1213 364 185 2014 175 41 34 chr5 21656413 21656962 -177973188 + MLT2A2 LTR ERVL 1 554 0 262 282 161 16 chr5 21657929 21658053 -177972097 + MIR SINE MIR 65 206 -56 216 146 0 49 chr5 21658167 21658208 -177971942 + L2 LINE L2 3216 3254 -18 1738 147 69 40 chr5 21658212 21658560 -177971590 + MLT1A1 LTR MaLR 1 358 -7 1186 29 0 0 chr5 21659039 21659177 -177970973 - AluY SINE Alu -21 290 153 28 71 0 0 chr5 21661329 21661385 -177968765 + AT_rich Low_complexity Low_complexity 1 56 0 25 31 0 0 chr5 21662834 21662866 -177967284 + AT_rich Low_complexity Low_complexity 1 32 0 220 321 71 18 chr5 21664198 21664310 -177965840 - MIR3 SINE MIR -49 159 42 33 0 0 0 chr5 21664808 21664841 -177965309 + AT_rich Low_complexity Low_complexity 1 33 0 1923 151 0 16 chr5 21667422 21667727 -177962423 + AluSx SINE Alu 1 300 -12 26745 45 2 0 chr5 21668253 21672386 -177957764 + L1PA5 LINE L1 2015 6154 0 2056 142 0 0 chr5 21675246 21675549 -177954601 - AluSg SINE Alu -3 307 5 236 162 0 0 chr5 21675598 21675635 -177954515 + MLT2B3 LTR ERVL 473 509 -45 205 207 17 0 chr5 21675635 21675693 -177954457 + (TA)n Simple_repeat Simple_repeat 1 59 0 * 211 232 18 0 chr5 21675655 21675711 -177954439 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 348 352 23 0 chr5 21676153 21676281 -177953869 + MIR SINE MIR 48 178 -84 2107 91 39 0 chr5 21676586 21676904 -177953246 + AluSx SINE Alu 1 312 0 24 32 0 0 chr5 21677018 21677049 -177953101 + AT_rich Low_complexity Low_complexity 1 31 0 248 313 12 0 chr5 21677983 21678063 -177952087 - MLT1L LTR MaLR -405 210 130 21 0 0 0 chr5 21679277 21679298 -177950852 + AT_rich Low_complexity Low_complexity 1 21 0 338 367 39 50 chr5 21679502 21679859 -177950291 - L2 LINE L2 -408 2906 2554 5848 233 38 65 chr5 21679882 21681717 -177948433 + L1MA4A LINE L1 1 1785 -5064 * 8123 173 23 21 chr5 21681715 21684272 -177945878 + L1MA4A LINE L1 4366 6930 -75 1477 183 55 18 chr5 21684272 21684546 -177945604 - AluJb SINE Alu -23 289 6 8123 173 23 21 chr5 21684546 21684618 -177945532 + L1MA4A LINE L1 6930 7000 -5 1369 219 11 21 chr5 21687471 21687785 -177942365 - AluJo SINE Alu 0 313 3 437 326 31 31 chr5 21689147 21689340 -177940810 - HAL1 LINE L1 -1126 1381 1189 237 296 28 0 chr5 21689718 21689789 -177940361 - AluJ/FRAM SINE Alu -16 286 214 193 102 68 23 chr5 21689829 21689917 -177940233 + (TA)n Simple_repeat Simple_repeat 2 93 0 231 161 56 7 chr5 21689928 21690071 -177940079 + (TA)n Simple_repeat Simple_repeat 2 151 0 446 272 83 74 chr5 21690103 21690427 -177939723 - HAL1 LINE L1 -2178 329 3 2019 112 3 3 chr5 21690544 21690858 -177939292 - AluSq SINE Alu 0 316 3 2631 35 0 6 chr5 21691973 21692286 -177937864 + AluY SINE Alu 1 311 0 23 54 0 0 chr5 21692701 21692738 -177937412 + AT_rich Low_complexity Low_complexity 1 37 0 1528 240 55 83 chr5 21693069 21693405 -177936745 + MER67D LTR ERV1 1 318 -196 1916 134 147 32 chr5 21693405 21693615 -177936535 - MSTA LTR MaLR -4 424 240 2121 127 3 3 chr5 21693615 21693922 -177936228 - AluSp SINE Alu -6 307 1 1916 134 147 32 chr5 21693922 21694091 -177936059 - MSTA LTR MaLR -188 240 1 1528 240 55 83 chr5 21694091 21694283 -177935867 + MER67D LTR ERV1 318 514 0 29 28 0 0 chr5 21694567 21694603 -177935547 + AT_rich Low_complexity Low_complexity 1 36 0 51 83 0 0 chr5 21694957 21695078 -177935072 + AT_rich Low_complexity Low_complexity 1 121 0 465 290 0 0 chr5 21695203 21695303 -177934847 + MER110-int LTR ERV1 3720 3819 -828 556 290 35 56 chr5 21695528 21695814 -177934336 + MER110-int LTR ERV1 3981 4260 -387 23 54 0 0 chr5 21696046 21696083 -177934067 + AT_rich Low_complexity Low_complexity 1 37 0 2369 54 14 3 chr5 21697383 21697678 -177932472 - AluY SINE Alu -13 298 1 297 75 0 0 chr5 21697745 21697785 -177932365 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 88 0 0 chr5 21698172 21698229 -177931921 + AT_rich Low_complexity Low_complexity 1 57 0 440 62 16 0 chr5 21698298 21698362 -177931788 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 22 0 0 0 chr5 21698362 21698384 -177931766 + AT_rich Low_complexity Low_complexity 1 22 0 239 311 139 8 chr5 21698916 21699038 -177931112 - L2 LINE L2 -255 3058 2921 222 191 0 0 chr5 21699092 21699134 -177931016 - L2 LINE L2 0 3313 3272 22 0 0 0 chr5 21699617 21699639 -177930511 + AT_rich Low_complexity Low_complexity 1 22 0 367 271 165 29 chr5 21700134 21700304 -177929846 + MIR SINE MIR 65 257 -5 567 284 98 55 chr5 21700738 21701211 -177928939 + MLT1D LTR MaLR 7 387 -3 3549 230 35 114 chr5 21701214 21702729 -177927421 + MLT1D-int LTR MaLR 1 1371 0 984 281 56 46 chr5 21702729 21703228 -177926922 + MLT1D LTR MaLR 1 504 -1 732 305 44 30 chr5 21703352 21703647 -177926503 - L2 LINE L2 -962 2352 2054 460 240 120 40 chr5 21704081 21704281 -177925869 - LTR45 LTR ERV1 -7 518 303 427 258 95 58 chr5 21704799 21705047 -177925103 + MLT1J LTR MaLR 64 288 -162 1755 188 19 9 chr5 21705429 21705754 -177924396 + MLT1B LTR MaLR 9 336 -54 418 90 13 13 chr5 21706893 21706971 -177923179 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 705 196 0 21 chr5 21708187 21708330 -177921820 - FLAM_C SINE Alu -3 140 1 1305 249 35 46 chr5 21709403 21709837 -177920313 + MLT1C LTR MaLR 39 467 0 3266 234 48 29 chr5 21709837 21710708 -177919442 + MLT1C-int LTR MaLR 1 888 -483 670 239 75 6 chr5 21710838 21710997 -177919153 + MLT1B LTR MaLR 298 467 0 303 306 27 18 chr5 21711006 21711117 -177919033 - MIR SINE MIR -120 142 31 29 0 0 0 chr5 21711892 21711921 -177918229 + AT_rich Low_complexity Low_complexity 1 29 0 2128 121 10 0 chr5 21712664 21712969 -177917181 + AluSq SINE Alu 3 310 -3 1824 182 0 39 chr5 21713504 21713862 -177916288 + MER2 DNA MER2_type 1 344 0 239 380 67 37 chr5 21714867 21715330 -177914820 + L2 LINE L2 2282 2758 -556 292 273 42 7 chr5 21716290 21716433 -177913717 + (TATATG)n Simple_repeat Simple_repeat 6 153 0 29 0 0 0 chr5 21717094 21717123 -177913027 + AT_rich Low_complexity Low_complexity 1 29 0 4106 117 48 0 chr5 21717831 21718454 -177911696 + MER39B LTR ERV1 1 653 0 196 344 113 41 chr5 21718984 21719179 -177910971 - MIR SINE MIR -29 233 25 194 345 63 63 chr5 21720528 21720783 -177909367 + L2 LINE L2 1536 1790 -1524 202 322 150 46 chr5 21720883 21721429 -177908721 - L2 LINE L2 -1044 2270 1668 27 49 0 0 chr5 21722462 21722503 -177907647 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr5 21722999 21723029 -177907121 + AT_rich Low_complexity Low_complexity 1 30 0 285 266 79 89 chr5 21723072 21723333 -177906817 + MLT1H LTR MaLR 1 291 -258 225 229 14 29 chr5 21723501 21723571 -177906579 + MLT1B-int LTR MaLR 5 73 -1298 2695 19 0 3 chr5 21723793 21724101 -177906049 - AluY SINE Alu -4 307 1 1284 224 65 20 chr5 21724711 21724953 -177905197 - Charlie1a DNA MER1_type -1311 1450 1220 1423 240 22 52 chr5 21724953 21725361 -177904789 + MSTD LTR MaLR 1 396 0 1284 224 65 20 chr5 21725361 21725670 -177904480 - Charlie1a DNA MER1_type -1541 1220 811 24 32 0 0 chr5 21725694 21725725 -177904425 + AT_rich Low_complexity Low_complexity 1 31 0 5857 76 14 30 chr5 21725728 21726324 -177903826 - L1P LINE L1 -1544 4602 3998 2005 116 0 0 chr5 21726324 21726601 -177903549 + AluSq SINE Alu 1 277 -36 189 0 0 0 chr5 21726610 21726631 -177903519 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 5857 76 14 30 chr5 21726631 21726880 -177903270 - L1P LINE L1 -2156 3990 3761 6827 139 6 36 chr5 21726880 21728913 -177901237 - L1PA10 LINE L1 -17 6151 4154 6503 71 1 0 chr5 21728917 21729758 -177900392 - L1PA7 LINE L1 -6 6148 5307 2746 150 34 26 chr5 21729762 21730268 -177899882 - L1PA10 LINE L1 -1958 4188 3679 1667 241 62 69 chr5 21730268 21731005 -177899145 - Charlie1a DNA MER1_type -676 779 48 2538 51 0 0 chr5 21731445 21731783 -177898367 + AluY SINE Alu 1 338 0 38 0 0 0 chr5 21731817 21731855 -177898295 + AT_rich Low_complexity Low_complexity 1 38 0 448 306 149 0 chr5 21732092 21732353 -177897797 + MLT1H LTR MaLR 250 549 0 223 167 0 45 chr5 21732782 21732803 -177897347 + (TA)n Simple_repeat Simple_repeat 2 22 -42 189 0 0 0 chr5 21732803 21732824 -177897326 + (GA)n Simple_repeat Simple_repeat 2 22 0 223 167 0 45 chr5 21732824 21732868 -177897282 + (TA)n Simple_repeat Simple_repeat 22 64 0 241 129 0 65 chr5 21732868 21732930 -177897220 + LTR66 LTR ERVL 394 451 -159 34 42 0 0 chr5 21733413 21733461 -177896689 + AT_rich Low_complexity Low_complexity 1 48 0 2019 97 0 0 chr5 21733671 21733938 -177896212 + AluSc SINE Alu 38 304 -5 250 102 51 17 chr5 21734004 21734063 -177896087 + T-rich Low_complexity Low_complexity 2 62 0 233 303 14 32 chr5 21734669 21734815 -177895335 + CT-rich Low_complexity Low_complexity 1 143 0 2191 111 0 0 chr5 21734904 21735193 -177894957 - AluSg SINE Alu -21 289 1 635 307 59 70 chr5 21735372 21735743 -177894407 - MLT1J LTR MaLR -144 367 1 194 62 31 0 chr5 21735877 21735909 -177894241 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 240 229 84 24 chr5 21735916 21735999 -177894151 - L1MC4 LINE L1 -1339 6703 6616 230 79 0 26 chr5 21736171 21736209 -177893941 + (TG)n Simple_repeat Simple_repeat 2 38 0 22 0 0 0 chr5 21736739 21736761 -177893389 + AT_rich Low_complexity Low_complexity 1 22 0 1415 190 7 28 chr5 21736820 21737164 -177892986 - AluJb SINE Alu 0 338 1 21 36 0 0 chr5 21737209 21737237 -177892913 + AT_rich Low_complexity Low_complexity 1 28 0 5787 148 72 27 chr5 21738958 21740134 -177890016 + Tigger3b DNA MER2_type 3 1231 0 243 61 0 0 chr5 21740271 21740304 -177889846 + (TG)n Simple_repeat Simple_repeat 2 34 0 35 41 0 0 chr5 21741243 21741292 -177888858 + AT_rich Low_complexity Low_complexity 1 49 0 348 290 130 35 chr5 21741292 21741523 -177888627 - MIR SINE MIR 0 262 10 190 380 44 0 chr5 21742173 21742286 -177887864 + L2 LINE L2 2296 2413 -901 991 91 14 14 chr5 21742603 21742731 -177887419 + LTR8 LTR ERV1 1 128 -563 2812 110 23 0 chr5 21742731 21743130 -177887020 + MLT2A2 LTR ERVL 2 409 -44 227 156 0 0 chr5 21743138 21743183 -177886967 - LTR66 LTR ERVL -171 439 395 255 125 0 0 chr5 21743209 21743249 -177886901 + (TG)n Simple_repeat Simple_repeat 1 40 0 367 94 0 0 chr5 21743249 21743302 -177886848 + MLT2A2 LTR ERVL 399 451 -2 3580 105 40 42 chr5 21743304 21743665 -177886485 + LTR8 LTR ERV1 123 484 -207 3586 51 2 47 chr5 21743665 21744174 -177885976 + L1PA5 LINE L1 5664 6149 -5 3580 105 40 42 chr5 21744174 21744381 -177885769 + LTR8 LTR ERV1 484 690 -1 21 0 0 0 chr5 21744679 21744700 -177885450 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 21745278 21745300 -177884850 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 180 0 0 0 chr5 21745439 21745459 -177884691 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 230 314 74 138 chr5 21745833 21746129 -177884021 + L2 LINE L2 2995 3271 -1 620 205 92 31 chr5 21746247 21746442 -177883708 - MER3 DNA MER1_type -1 208 2 41 78 0 0 chr5 21746552 21746642 -177883508 + AT_rich Low_complexity Low_complexity 1 90 0 1839 220 74 28 chr5 21748182 21748655 -177881495 - MLT1D LTR MaLR -5 500 6 1858 151 10 0 chr5 21749439 21749730 -177880420 - AluSx SINE Alu -18 294 1 563 237 0 0 chr5 21750086 21750200 -177879950 + FLAM_A SINE Alu 2 115 -18 215 313 0 25 chr5 21751564 21751644 -177878506 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 * 221 246 0 33 chr5 21751592 21751653 -177878497 + (TATATG)n Simple_repeat Simple_repeat 3 61 0 186 43 0 0 chr5 21754987 21755010 -177875140 + (TTC)n Simple_repeat Simple_repeat 2 24 0 980 184 5 74 chr5 21755586 21755803 -177874347 + AluJb SINE Alu 1 202 -110 378 0 0 0 chr5 21755938 21755980 -177874170 + (TG)n Simple_repeat Simple_repeat 1 42 0 192 290 48 0 chr5 21756235 21756297 -177873853 + L2 LINE L2 3206 3270 -2 2047 207 40 72 chr5 21759781 21760529 -177869621 - L1MC3 LINE L1 -528 7257 6534 31 44 0 0 chr5 21761023 21761068 -177869082 + AT_rich Low_complexity Low_complexity 1 45 0 180 296 62 25 chr5 21761563 21761644 -177868506 + L2 LINE L2 2979 3062 -210 266 0 0 29 chr5 21761979 21762014 -177868136 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 354 222 0 0 chr5 21762328 21762400 -177867750 - MLT1A2 LTR MaLR -302 72 1 266 344 194 13 chr5 21762403 21762717 -177867433 - L2 LINE L2 -390 2924 2554 642 214 55 39 chr5 21762819 21763001 -177867149 + MER5A DNA MER1_type 2 186 -3 631 333 94 15 chr5 21763011 21763353 -177866797 - L2 LINE L2 -996 2318 1950 485 242 89 32 chr5 21763363 21763553 -177866597 + MER63B DNA MER1_type 1 201 -235 252 0 0 0 chr5 21763554 21763582 -177866568 + (TA)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 21764112 21764133 -177866017 + AT_rich Low_complexity Low_complexity 1 21 0 1179 141 0 0 chr5 21764428 21764598 -177865552 - LTR8 LTR ERV1 -1 690 521 1085 36 7 0 chr5 21764635 21764772 -177865378 - L1PA5 LINE L1 -5 6149 6012 21 71 0 0 chr5 21767564 21767606 -177862544 + AT_rich Low_complexity Low_complexity 1 42 0 338 336 115 65 chr5 21768395 21768889 -177861261 + L2 LINE L2 2296 2814 -500 381 328 147 31 chr5 21769029 21769355 -177860795 + L2 LINE L2 2950 3313 0 23 0 0 0 chr5 21769363 21769386 -177860764 + AT_rich Low_complexity Low_complexity 1 23 0 7694 186 11 15 chr5 21769469 21771925 -177858225 + L1MA6 LINE L1 3786 6239 -61 21 36 0 0 chr5 21771974 21772002 -177858148 + AT_rich Low_complexity Low_complexity 1 28 0 355 210 0 0 chr5 21772516 21772578 -177857572 - MLT1C LTR MaLR 0 467 406 1936 151 3 7 chr5 21772578 21772876 -177857274 - AluSx SINE Alu -15 297 1 594 245 20 7 chr5 21772892 21773043 -177857107 - MLT1A2 LTR MaLR -221 153 1 314 375 157 6 chr5 21773045 21773370 -177856780 - L2 LINE L2 -387 2927 2554 645 337 78 42 chr5 21773421 21773474 -177856676 - L2 LINE L2 -943 2371 2321 684 213 49 38 chr5 21773474 21773657 -177856493 + MER5A DNA MER1_type 2 186 -3 645 337 78 42 chr5 21773657 21774012 -177856138 - L2 LINE L2 -993 2321 1948 1204 252 67 22 chr5 21774021 21774330 -177855820 + MER63B DNA MER1_type 1 335 -727 243 0 0 0 chr5 21774330 21774357 -177855793 + (TG)n Simple_repeat Simple_repeat 2 28 0 1204 252 67 22 chr5 21774357 21774464 -177855686 + MER63B DNA MER1_type 335 436 0 796 216 17 11 chr5 21775275 21775451 -177854699 - MLT1C LTR MaLR 0 467 291 1069 155 0 0 chr5 21775452 21775666 -177854484 - AluSg/x SINE Alu 0 345 132 2041 129 0 17 chr5 21775666 21775825 -177854325 - AluSx SINE Alu -20 292 139 2430 74 0 0 chr5 21775825 21776122 -177854028 - AluSg SINE Alu -13 297 1 2041 129 0 17 chr5 21776122 21776257 -177853893 - AluSx SINE Alu -173 139 3 935 249 64 10 chr5 21776257 21776554 -177853596 - MLT1C LTR MaLR -152 315 3 25 31 0 0 chr5 21777299 21777331 -177852819 + AT_rich Low_complexity Low_complexity 1 32 0 1901 120 36 7 chr5 21777755 21778052 -177852098 + AluY SINE Alu 1 305 0 583 238 49 12 chr5 21778288 21778452 -177851698 - L1MA9 LINE L1 -194 6118 5949 2151 127 0 0 chr5 21778774 21779081 -177851069 - AluSq SINE Alu -6 307 1 2060 102 41 0 chr5 21779091 21779384 -177850766 - AluSx SINE Alu -7 305 1 24 32 0 0 chr5 21779675 21779706 -177850444 + AT_rich Low_complexity Low_complexity 1 31 0 33 43 0 0 chr5 21779773 21779820 -177850330 + AT_rich Low_complexity Low_complexity 1 47 0 21 71 0 0 chr5 21781743 21781785 -177848365 + AT_rich Low_complexity Low_complexity 1 42 0 2188 145 5 35 chr5 21782016 21782389 -177847761 + THE1B LTR MaLR 1 362 -2 1777 152 11 0 chr5 21782781 21783064 -177847086 + AluSx SINE Alu 2 287 -25 292 184 0 26 chr5 21783064 21783140 -177847010 + GA-rich Low_complexity Low_complexity 3 76 0 332 343 127 26 chr5 21783306 21783435 -177846715 + L2 LINE L2 2214 2329 -985 1704 182 0 3 chr5 21783435 21783726 -177846424 + AluJo SINE Alu 13 302 -10 189 0 0 0 chr5 21783732 21783753 -177846397 + (CAGAA)n Simple_repeat Simple_repeat 2 22 0 332 343 127 26 chr5 21783753 21784202 -177845948 + L2 LINE L2 2333 2937 -377 245 29 29 0 chr5 21784337 21784371 -177845779 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2393 78 7 0 chr5 21784838 21785145 -177845005 - AluSc SINE Alu 0 309 1 290 257 18 53 chr5 21785270 21785383 -177844767 + Zaphod DNA AcHobo 3923 4031 0 639 285 75 46 chr5 21785426 21785731 -177844419 + L2 LINE L2 2995 3308 -5 28 71 0 0 chr5 21786720 21786776 -177843374 + AT_rich Low_complexity Low_complexity 1 56 0 309 298 0 22 chr5 21787045 21787151 -177842999 + MER5A DNA MER1_type 7 121 -68 1554 171 21 114 chr5 21787300 21787722 -177842428 - MLT1B LTR MaLR -7 383 1 257 0 30 0 chr5 21788457 21788490 -177841660 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1408 193 11 19 chr5 21788495 21788764 -177841386 - AluJo SINE Alu -30 282 16 8617 40 4 3 chr5 21788864 21789972 -177840178 + L1P LINE L1 2287 3395 -2751 2309 144 13 3 chr5 21790124 21790513 -177839637 - L1MC1 LINE L1 -5 6328 5936 1187 129 18 0 chr5 21790728 21790898 -177839252 + MER1B DNA MER1_type 167 339 0 638 256 14 14 chr5 21790898 21791117 -177839033 - L1M4 LINE L1 -1566 4580 4362 4883 203 10 27 chr5 21791394 21792714 -177837436 + L1MA6 LINE L1 4933 6239 -61 291 289 40 0 chr5 21793158 21793234 -177836916 - AluJ/FLAM SINE Alu -223 79 1 2656 322 81 64 chr5 21793329 21794376 -177835774 + L2 LINE L2 1069 2097 -1216 1319 224 107 57 chr5 21794376 21794817 -177835333 - MER31B LTR ERV1 0 466 4 2656 322 81 64 chr5 21794817 21795980 -177834170 + L2 LINE L2 2097 3312 -1 226 333 0 0 chr5 21796457 21796517 -177833633 - MIR SINE MIR -139 123 64 454 280 60 6 chr5 21797330 21797498 -177832652 - MER115 DNA AcHobo 0 693 517 23 78 0 0 chr5 21797958 21798009 -177832141 + AT_rich Low_complexity Low_complexity 1 51 0 3711 117 29 15 chr5 21799604 21800193 -177829957 - L1PA13 LINE L1 -4 6159 5563 2515 52 0 0 chr5 21800652 21800961 -177829189 + AluY SINE Alu 1 309 -2 187 381 24 0 chr5 21801826 21801910 -177828240 - L2 LINE L2 -6 3266 3181 1692 176 7 7 chr5 21802820 21803115 -177827035 + AluJb SINE Alu 5 299 -13 3985 166 71 42 chr5 21803621 21804528 -177825622 + L1MA10 LINE L1 5401 6333 -1 461 330 198 18 chr5 21805853 21806186 -177823964 - L2 LINE L2 0 3313 2921 756 189 17 83 chr5 21806206 21806386 -177823764 + AluJo SINE Alu 65 232 -80 1222 219 0 33 chr5 21807689 21807985 -177822165 - AluJo SINE Alu 0 308 22 2335 85 3 7 chr5 21808962 21809268 -177820882 - AluSp SINE Alu -8 305 1 1757 123 4 0 chr5 21809574 21809817 -177820333 - AluSx SINE Alu -68 244 1 194 91 30 0 chr5 21810075 21810108 -177820042 + A-rich Low_complexity Low_complexity 3 36 0 2337 216 12 26 chr5 21810949 21811457 -177818693 + MER74A LTR ERVL 3 503 -55 327 110 0 220 chr5 21811531 21811573 -177818577 + MADE1 DNA Mariner 1 10 -70 2510 53 0 37 chr5 21811573 21811894 -177818256 - AluY SINE Alu 0 311 3 327 110 0 220 chr5 21811894 21811951 -177818199 + MADE1 DNA Mariner 10 78 -2 1666 140 61 4 chr5 21812230 21812508 -177817642 - AluJb SINE Alu -7 305 12 1977 167 2 57 chr5 21813541 21813943 -177816207 - L1PA16 LINE L1 -20 6146 5767 1789 170 35 67 chr5 21814000 21814052 -177816098 - MLT1B LTR MaLR -2 388 336 1020 136 29 83 chr5 21814052 21814294 -177815856 + MER30 DNA MER1_type 2 230 0 1789 170 35 67 chr5 21814294 21814642 -177815508 - MLT1B LTR MaLR -54 336 1 2049 135 3 0 chr5 21814895 21815191 -177814959 - AluSx SINE Alu -15 297 1 653 339 55 28 chr5 21815400 21815981 -177814169 + L2 LINE L2 2716 3313 0 213 333 62 49 chr5 21816143 21816368 -177813782 - L2 LINE L2 -230 3042 2815 3124 201 8 5 chr5 21816649 21817251 -177812899 + MER6A DNA MER2_type 1 604 -1 207 232 0 0 chr5 21818117 21818173 -177811977 + (TA)n Simple_repeat Simple_repeat 2 57 0 424 266 66 111 chr5 21818493 21818719 -177811431 - MIR SINE MIR -24 238 23 559 270 111 136 chr5 21819150 21819495 -177810655 + L2 LINE L2 1842 2194 -1119 709 236 30 50 chr5 21819495 21819694 -177810456 + MIR SINE MIR 45 239 -23 559 270 111 136 chr5 21819694 21820180 -177809970 + L2 LINE L2 2194 2691 -622 2146 117 0 32 chr5 21820180 21820496 -177809654 - AluSx SINE Alu -6 306 1 559 270 111 136 chr5 21820496 21820958 -177809192 + L2 LINE L2 2691 3280 -33 444 219 0 0 chr5 21821253 21821349 -177808801 - L1MA6 LINE L1 -6 6294 6199 22 70 0 0 chr5 21821354 21821397 -177808753 + AT_rich Low_complexity Low_complexity 1 43 0 1928 143 0 31 chr5 21821434 21821756 -177808394 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 21824283 21824304 -177805846 + AT_rich Low_complexity Low_complexity 1 21 0 2580 110 3 6 chr5 21824646 21825011 -177805139 + THE1B LTR MaLR 1 364 0 25 31 0 0 chr5 21825046 21825078 -177805072 + AT_rich Low_complexity Low_complexity 1 32 0 279 54 0 0 chr5 21825180 21825217 -177804933 + (CA)n Simple_repeat Simple_repeat 2 38 0 27 0 0 0 chr5 21827570 21827597 -177802553 + AT_rich Low_complexity Low_complexity 1 27 0 2958 180 36 170 chr5 21827952 21828700 -177801450 - L1MC3 LINE L1 -8 7777 7221 279 309 0 0 chr5 21828700 21828781 -177801369 - MLT1F1 LTR MaLR -442 125 45 2958 180 36 170 chr5 21828781 21829390 -177800760 - L1MC3 LINE L1 -564 7221 6532 31 44 0 0 chr5 21829883 21829928 -177800222 + AT_rich Low_complexity Low_complexity 1 45 0 1722 239 34 30 chr5 21830243 21830746 -177799404 - MLT1D LTR MaLR 0 505 1 4866 118 18 24 chr5 21830751 21831513 -177798637 + MER4E LTR ERV1 1 758 -21 21 0 0 0 chr5 21832549 21832570 -177797580 + AT_rich Low_complexity Low_complexity 1 21 0 918 182 13 0 chr5 21833066 21833225 -177796925 + MER2 DNA MER2_type 1 161 -184 230 371 0 0 chr5 21833277 21833347 -177796803 + MER2 DNA MER2_type 272 341 -4 2186 130 0 0 chr5 21833436 21833736 -177796414 - AluSq SINE Alu -13 300 1 21 57 0 0 chr5 21833794 21833829 -177796321 + AT_rich Low_complexity Low_complexity 1 35 0 452 250 47 75 chr5 21833959 21834288 -177795862 + L1ME LINE L1 5333 5653 -517 189 0 0 0 chr5 21834476 21834497 -177795653 + (TG)n Simple_repeat Simple_repeat 2 22 0 1498 135 104 4 chr5 21835320 21835579 -177794571 + AluSx SINE Alu 2 286 -26 2091 125 0 10 chr5 21836204 21836507 -177793643 + AluSg SINE Alu 1 300 -10 27 62 0 0 chr5 21836552 21836600 -177793550 + AT_rich Low_complexity Low_complexity 1 48 0 301 389 21 21 chr5 21837116 21837260 -177792890 + L1ME LINE L1 443 586 -5533 619 296 100 52 chr5 21837367 21838006 -177792144 + L1ME LINE L1 4121 4790 -1339 300 341 0 0 chr5 21838259 21838388 -177791762 + L1ME LINE L1 4941 5069 -1060 294 281 66 53 chr5 21838478 21838781 -177791369 + L1ME LINE L1 5241 5547 -598 1877 158 0 0 chr5 21839050 21839342 -177790808 + AluJb SINE Alu 1 292 -20 23 0 0 0 chr5 21839566 21839589 -177790561 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr5 21839833 21839863 -177790287 + AT_rich Low_complexity Low_complexity 1 30 0 356 56 38 62 chr5 21840100 21840179 -177789971 + MLT2C2 LTR ERVL 348 464 0 267 259 0 0 chr5 21841717 21841771 -177788379 - MER115 DNA AcHobo -639 54 1 2038 86 0 0 chr5 21841962 21842217 -177787933 - AluY SINE Alu -12 299 45 244 286 101 17 chr5 21842345 21842464 -177787686 + MIR SINE MIR 125 253 -9 30 45 0 0 chr5 21842754 21842798 -177787352 + AT_rich Low_complexity Low_complexity 1 44 0 192 77 0 0 chr5 21843515 21843541 -177786609 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 31 0 0 0 chr5 21843768 21843799 -177786351 + AT_rich Low_complexity Low_complexity 1 31 0 883 223 66 15 chr5 21844186 21844383 -177785767 - MER58A DNA MER1_type -16 208 2 200 346 103 22 chr5 21845779 21845964 -177784186 + L2 LINE L2 2164 2363 -951 25 40 0 20 chr5 21846506 21846523 -177783627 + AT_rich Low_complexity Low_complexity 1 17 -32 1773 162 0 17 chr5 21846523 21846825 -177783325 - AluJb SINE Alu -15 297 1 25 40 0 20 chr5 21846825 21846857 -177783293 + AT_rich Low_complexity Low_complexity 17 49 0 239 0 32 0 chr5 21847320 21847351 -177782799 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 4025 31 4 0 chr5 21847352 21847835 -177782315 - L1PA4 LINE L1 -3 6152 5668 225 167 0 0 chr5 21847838 21847874 -177782276 - MLT1I LTR MaLR -276 133 98 333 218 0 0 chr5 21848016 21848094 -177782056 + GA-rich Low_complexity Low_complexity 3 80 0 182 269 0 19 chr5 21848624 21848676 -177781474 - L2 LINE L2 -1 3312 3262 9770 252 53 26 chr5 21848825 21851511 -177778639 - HERVL-D LTR ERVL -2897 2757 1 335 125 0 0 chr5 21851511 21851559 -177778591 - MLT2D LTR ERVL 0 414 367 367 259 14 0 chr5 21851562 21851701 -177778449 + (TA)n Simple_repeat Simple_repeat 1 141 0 1700 244 6 57 chr5 21851704 21851727 -177778423 - MLT2B1 LTR ERVL -41 479 456 428 0 19 0 chr5 21851727 21851779 -177778371 + (GA)n Simple_repeat Simple_repeat 2 54 0 1700 244 6 57 chr5 21851779 21852260 -177777890 - MLT2B1 LTR ERVL -64 456 1 22 0 0 0 chr5 21852584 21852606 -177777544 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 21853188 21853215 -177776935 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 21853340 21853368 -177776782 + AT_rich Low_complexity Low_complexity 1 28 0 26 64 0 0 chr5 21854153 21854200 -177775950 + AT_rich Low_complexity Low_complexity 1 47 0 718 240 87 45 chr5 21854252 21854539 -177775611 + HAL1 LINE L1 248 546 -1961 516 32 0 0 chr5 21854895 21854957 -177775193 + (TA)n Simple_repeat Simple_repeat 2 63 0 27 49 0 0 chr5 21855397 21855438 -177774712 + AT_rich Low_complexity Low_complexity 1 41 0 32 0 0 0 chr5 21855495 21855527 -177774623 + AT_rich Low_complexity Low_complexity 1 32 0 506 236 214 11 chr5 21855711 21855893 -177774257 + MER20 DNA MER1_type 1 219 0 258 309 27 27 chr5 21855991 21856101 -177774049 + MIR SINE MIR 23 132 -76 234 250 0 0 chr5 21856696 21856744 -177773406 + MLT1G1 LTR MaLR 144 191 -404 2240 90 9 0 chr5 21856774 21857096 -177773054 - L1PB1 LINE L1 0 6151 5827 44 0 0 0 chr5 21857464 21857508 -177772642 + AT_rich Low_complexity Low_complexity 1 44 0 1327 60 6 0 chr5 21857546 21857712 -177772438 - AluY SINE Alu -16 295 129 2520 45 6 6 chr5 21857714 21858025 -177772125 - AluY SINE Alu 0 311 1 341 173 107 0 chr5 21858244 21858319 -177771831 + MER103 DNA DNA 82 164 -2 1899 163 33 0 chr5 21858389 21858721 -177771429 - MER2 DNA MER2_type 0 344 2 319 345 40 40 chr5 21858744 21858970 -177771180 + MIR SINE MIR 37 262 0 345 117 0 0 chr5 21858972 21859032 -177771118 + (TGG)n Simple_repeat Simple_repeat 1 60 0 2995 93 61 4 chr5 21859957 21860417 -177769733 + LTR19A LTR ERV1 1 486 0 383 136 0 0 chr5 21860489 21860548 -177769602 - MER20 DNA MER1_type 0 219 161 767 224 18 54 chr5 21860974 21861197 -177768953 - MER20 DNA MER1_type -3 216 2 339 180 11 22 chr5 21861207 21861296 -177768854 - MER5C DNA MER1_type -1 323 236 940 179 0 0 chr5 21861472 21861628 -177768522 - FRAM SINE Alu -10 156 1 183 129 0 0 chr5 21862784 21862815 -177767335 + (TA)n Simple_repeat Simple_repeat 1 31 0 448 349 40 9 chr5 21863995 21864316 -177765834 + MER46C DNA MER2_type 7 337 -1 207 331 100 23 chr5 21864318 21864448 -177765702 - MIR3 SINE MIR -36 172 33 191 250 34 102 chr5 21865704 21865792 -177764358 + MIR SINE MIR 127 208 -54 1519 219 7 3 chr5 21867099 21867391 -177762759 + AluJb SINE Alu 2 294 -18 21 57 0 0 chr5 21868274 21868309 -177761841 + AT_rich Low_complexity Low_complexity 1 35 0 1959 133 0 3 chr5 21868491 21868807 -177761343 - AluSg SINE Alu 0 315 1 22 0 0 0 chr5 21869700 21869722 -177760428 + AT_rich Low_complexity Low_complexity 1 22 0 1475 158 3 108 chr5 21871501 21871836 -177758314 - AluJb SINE Alu -2 300 1 1262 317 129 27 chr5 21872412 21873455 -177756695 + L2 LINE L2 1732 2881 -433 1291 198 19 64 chr5 21873652 21873966 -177756184 + MLT1B LTR MaLR 87 386 -4 23 78 0 0 chr5 21874286 21874337 -177755813 + AT_rich Low_complexity Low_complexity 1 51 0 2098 129 3 0 chr5 21874990 21875293 -177754857 - AluY SINE Alu -7 304 1 686 242 14 14 chr5 21876062 21876281 -177753869 + L1M4 LINE L1 4362 4580 -1566 1113 134 17 12 chr5 21876281 21876453 -177753697 - MER1B DNA MER1_type 0 339 167 2311 144 13 3 chr5 21876658 21877047 -177753103 + L1MC1 LINE L1 5936 6328 -5 25 65 0 0 chr5 21877773 21877819 -177752331 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr5 21878132 21878154 -177751996 + AT_rich Low_complexity Low_complexity 1 22 0 2310 180 80 4 chr5 21879237 21879714 -177750436 + MER67D LTR ERV1 2 514 0 25 75 0 0 chr5 21881463 21881516 -177748634 + AT_rich Low_complexity Low_complexity 1 53 0 279 198 55 33 chr5 21881832 21881923 -177748227 + L1MB3 LINE L1 6090 6182 -1 27 0 0 0 chr5 21882089 21882116 -177748034 + AT_rich Low_complexity Low_complexity 1 27 0 1083 254 40 4 chr5 21882697 21882949 -177747201 + Tigger7 DNA MER2_type 3 263 -470 306 207 17 0 chr5 21882951 21883009 -177747141 + Tigger7 DNA MER2_type 2529 2587 0 30 59 0 0 chr5 21883141 21883192 -177746958 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr5 21883303 21883326 -177746824 + AT_rich Low_complexity Low_complexity 1 23 0 202 281 158 0 chr5 21883462 21883544 -177746606 + L3b LINE CR1 1195 1289 -294 29 78 0 0 chr5 21883954 21884018 -177746132 + AT_rich Low_complexity Low_complexity 1 64 0 2648 29 0 0 chr5 21884594 21884905 -177745245 + AluYa5 SINE Alu 1 311 0 343 224 9 0 chr5 21885419 21885651 -177744499 + (TA)n Simple_repeat Simple_repeat 1 234 0 1418 150 16 8 chr5 21885774 21886097 -177744053 - L1M1 LINE L1 -743 5403 5194 2040 134 42 25 chr5 21886222 21886579 -177743571 - THE1B LTR MaLR 0 364 2 434 304 139 22 chr5 21886859 21887218 -177742932 - L1MC/D LINE L1 -2144 5664 5264 1376 149 5 111 chr5 21887344 21887486 -177742664 - L1M1 LINE L1 -530 5775 5691 1959 141 10 0 chr5 21887486 21887792 -177742358 - AluSc SINE Alu 0 309 1 1376 149 5 111 chr5 21887792 21887992 -177742158 - L1M1 LINE L1 -614 5691 5471 25 51 0 0 chr5 21888384 21888423 -177741727 + AT_rich Low_complexity Low_complexity 1 39 0 2227 107 7 7 chr5 21888786 21889096 -177741054 - AluSx SINE Alu -2 310 1 22 56 0 0 chr5 21890859 21890895 -177739255 + AT_rich Low_complexity Low_complexity 1 36 0 2690 149 32 17 chr5 21891235 21891704 -177738446 - Tigger1 DNA MER2_type 0 2418 1943 2057 195 71 2 chr5 21891704 21892099 -177738051 + MSTA LTR MaLR 1 422 -6 10875 147 19 29 chr5 21892106 21892595 -177737555 - Tigger1 DNA MER2_type -473 1945 1453 1935 113 25 0 chr5 21892595 21892896 -177737254 - AluSx SINE Alu 0 308 1 10875 147 19 29 chr5 21892896 21893873 -177736277 - Tigger1 DNA MER2_type -965 1453 499 2120 117 3 3 chr5 21893873 21894172 -177735978 - AluSp SINE Alu -13 300 2 10875 147 19 29 chr5 21894172 21894638 -177735512 - Tigger1 DNA MER2_type -1919 499 30 22 56 0 0 chr5 21894815 21894851 -177735299 + AT_rich Low_complexity Low_complexity 1 36 0 1880 84 0 0 chr5 21896620 21896859 -177733291 - AluSg/x SINE Alu -6 306 68 1212 166 34 126 chr5 21897943 21898106 -177732044 - AluJb SINE Alu -16 296 176 2024 144 0 0 chr5 21898106 21898411 -177731739 - AluSx SINE Alu -7 305 1 1212 166 34 126 chr5 21898411 21898573 -177731577 - AluJb SINE Alu -136 176 1 180 307 123 26 chr5 21899649 21899763 -177730387 + MIR SINE MIR 16 140 -122 237 159 0 0 chr5 21901238 21901282 -177728868 + CT-rich Low_complexity Low_complexity 2 45 0 4797 131 27 67 chr5 21903378 21904294 -177725856 + THE1-int LTR MaLR 267 1146 -434 525 76 0 0 chr5 21904293 21904372 -177725778 - L1PBa LINE L1 -4427 2436 2358 * 365 295 14 7 chr5 21904884 21905023 -177725127 - L1ME LINE L1 -365 5805 5666 425 339 148 23 chr5 21905703 21906276 -177723874 + L3 LINE CR1 579 1223 -354 2102 120 3 0 chr5 21906627 21906947 -177723203 - AluSx SINE Alu 0 323 3 305 283 109 18 chr5 21906970 21907193 -177722957 - L1ME3A LINE L1 -302 5868 5616 439 294 80 54 chr5 21907701 21908263 -177721887 - L1MEd LINE L1 -4772 1497 946 5225 38 3 0 chr5 21908413 21909040 -177721110 + L1PA5 LINE L1 5517 6145 -9 26 0 0 0 chr5 21909040 21909066 -177721084 + AT_rich Low_complexity Low_complexity 1 26 0 1299 190 149 31 chr5 21909345 21909385 -177720765 + MSTD LTR MaLR 38 72 -324 2109 104 37 13 chr5 21909385 21909683 -177720467 - AluSq SINE Alu -8 305 1 1299 190 149 31 chr5 21909683 21909963 -177720187 + MSTD LTR MaLR 72 396 0 407 330 65 33 chr5 21910031 21910307 -177719843 + LTR33 LTR ERVL 235 519 -2 379 190 27 15 chr5 21910395 21910666 -177719484 + (TA)n Simple_repeat Simple_repeat 1 274 0 494 341 51 20 chr5 21911255 21911510 -177718640 + L2 LINE L2 1443 1705 -1609 193 195 0 24 chr5 21911679 21911720 -177718430 + L3 LINE CR1 1441 1480 -97 641 297 113 63 chr5 21911973 21912515 -177717635 + L2 LINE L2 1776 2344 -970 610 191 20 7 chr5 21912519 21912666 -177717484 + L1MC3 LINE L1 7636 7784 -1 2090 113 37 0 chr5 21915306 21915606 -177714544 + AluSx SINE Alu 1 311 -1 249 318 69 42 chr5 21915800 21915989 -177714161 + L2 LINE L2 2221 2414 -900 420 294 14 65 chr5 21916163 21916377 -177713773 - MLT1K LTR MaLR -3 585 383 209 286 0 0 chr5 21917122 21917171 -177712979 + L2 LINE L2 3255 3303 -10 2386 74 3 3 chr5 21918342 21918463 -177711687 + AluY SINE Alu 1 121 -190 209 30 61 0 chr5 21918463 21918496 -177711654 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2386 74 3 3 chr5 21918496 21918684 -177711466 + AluY SINE Alu 120 310 -1 2084 120 0 13 chr5 21918702 21919001 -177711149 + AluSq SINE Alu 1 295 -18 206 121 0 0 chr5 21919599 21919632 -177710518 + (TAAAA)n Simple_repeat Simple_repeat 1 33 0 209 286 54 62 chr5 21919994 21920106 -177710044 + L2 LINE L2 2915 3025 -288 267 220 10 160 chr5 21920169 21920269 -177709881 + L2 LINE L2 3186 3270 -2 1890 149 68 11 chr5 21920790 21921145 -177709005 + THE1C LTR MaLR 1 375 0 209 323 96 30 chr5 21921622 21921820 -177708330 + L2 LINE L2 2258 2468 -846 539 292 92 26 chr5 21922599 21922794 -177707356 + MIR SINE MIR 27 234 -28 23 0 0 0 chr5 21923690 21923713 -177706437 + AT_rich Low_complexity Low_complexity 1 23 0 727 114 18 0 chr5 21923739 21923853 -177706297 - L1PA13 LINE L1 -18 6145 6030 610 100 11 0 chr5 21923853 21923943 -177706207 + L1PA12 LINE L1 5893 5983 -185 1231 304 154 14 chr5 21925859 21926644 -177703506 - L2 LINE L2 -942 2372 1478 1133 221 32 39 chr5 21927542 21927897 -177702253 + MLT2D LTR ERVL 2 408 -6 1961 137 64 19 chr5 21928908 21929267 -177700883 + THE1C LTR MaLR 1 375 0 3855 131 65 0 chr5 21929268 21929863 -177700287 + THE1C-int LTR MaLR 2 635 -945 2514 94 11 0 chr5 21929863 21930214 -177699936 - THE1A LTR MaLR 0 355 1 6236 129 18 15 chr5 21930214 21931161 -177698989 + THE1C-int LTR MaLR 631 1580 0 1816 148 93 6 chr5 21931161 21931506 -177698644 + THE1C LTR MaLR 1 375 0 522 316 130 33 chr5 21932525 21932886 -177697264 + MLT1J2 LTR MaLR 1 396 -54 317 362 67 37 chr5 21933640 21933938 -177696212 + L2 LINE L2 2217 2523 -791 248 328 69 9 chr5 21934050 21934166 -177695984 - LTR33 LTR ERVL -91 430 308 510 263 53 46 chr5 21934267 21934419 -177695731 - LTR33 LTR ERVL -358 163 11 194 222 111 71 chr5 21934646 21934745 -177695405 + L2 LINE L2 663 765 -2549 222 346 48 119 chr5 21936702 21937207 -177692943 - L2 LINE L2 0 3272 2804 558 184 0 0 chr5 21937267 21937354 -177692796 - Tigger7 DNA MER2_type 0 2487 2401 256 135 0 19 chr5 21937357 21937409 -177692741 - Tigger7 DNA MER2_type -1961 526 476 1229 218 39 18 chr5 21937410 21937690 -177692460 - Tigger7 DNA MER2_type -2201 286 1 206 206 15 29 chr5 21938150 21938218 -177691932 + A-rich Low_complexity Low_complexity 4 70 0 252 248 120 48 chr5 21938246 21938371 -177691779 + L1MC5 LINE L1 7010 7143 -818 216 241 0 35 chr5 21939120 21939178 -177690972 + (CATA)n Simple_repeat Simple_repeat 3 58 0 223 286 12 24 chr5 21939227 21939274 -177690876 + G-rich Low_complexity Low_complexity 4 51 -35 1662 201 27 56 chr5 21939274 21939421 -177690729 + MLT1A1 LTR MaLR 1 151 -214 1585 191 3 33 chr5 21939421 21939725 -177690425 - AluJo SINE Alu -17 295 1 1662 201 27 56 chr5 21939725 21939951 -177690199 + MLT1A1 LTR MaLR 151 363 -2 223 286 12 24 chr5 21939951 21939987 -177690163 + G-rich Low_complexity Low_complexity 51 86 0 201 125 0 0 chr5 21940536 21940568 -177689582 - MIR SINE MIR -112 150 119 2376 143 6 3 chr5 21941266 21941629 -177688521 + THE1B LTR MaLR 1 364 0 21 36 0 0 chr5 21942780 21942808 -177687342 + AT_rich Low_complexity Low_complexity 1 28 0 636 304 122 61 chr5 21942888 21943456 -177686694 + L1M4 LINE L1 2382 2914 -3232 1424 259 72 13 chr5 21943456 21943931 -177686219 - MLT1D LTR MaLR 0 505 3 636 304 122 61 chr5 21943931 21944548 -177685602 + L1M4 LINE L1 2914 3635 -2511 267 195 134 0 chr5 21944719 21944801 -177685349 + L1MB8 LINE L1 1149 1241 -5301 992 239 55 0 chr5 21944805 21945006 -177685144 + L1PA15 LINE L1 2 213 -6574 16549 48 7 2 chr5 21945007 21947865 -177682285 + L1PA5 LINE L1 3274 6147 -7 14843 229 25 26 chr5 21947905 21954158 -177675992 + L1PA15 LINE L1 217 6609 -207 2168 166 38 24 chr5 21954158 21954580 -177675570 - MSTA LTR MaLR 0 428 1 14843 229 25 26 chr5 21954580 21954767 -177675383 + L1PA15 LINE L1 6609 6795 -21 794 133 7 22 chr5 21954770 21954905 -177675245 + MSTA LTR MaLR 296 428 0 1755 254 33 52 chr5 21954938 21955867 -177674283 + L1MB8 LINE L1 1202 2099 -4547 25 0 0 0 chr5 21955922 21955947 -177674203 + AT_rich Low_complexity Low_complexity 1 25 0 1808 235 68 24 chr5 21955974 21956471 -177673679 + MLT2B1 LTR ERVL 1 519 -1 977 249 83 51 chr5 21956551 21957231 -177672919 + L1MB8 LINE L1 2363 3069 -3575 3225 219 45 47 chr5 21957234 21958191 -177671959 + L1MB8 LINE L1 4805 5761 -915 1957 115 7 4 chr5 21958191 21958494 -177671656 + AluSg SINE Alu 3 306 0 3225 219 45 47 chr5 21958494 21959408 -177670742 + L1MB8 LINE L1 5761 6675 -1 1982 177 43 33 chr5 21960682 21961226 -177668924 - MLT2A2 LTR ERVL 0 554 1 2147 73 0 3 chr5 21961347 21961633 -177668517 + AluY SINE Alu 24 308 -3 209 310 20 76 chr5 21961642 21961839 -177668311 - L2 LINE L2 -221 3051 2866 196 368 29 0 chr5 21961901 21961969 -177668181 + MIR SINE MIR 49 118 -90 189 107 0 0 chr5 21961982 21962010 -177668140 + (T)n Simple_repeat Simple_repeat 1 28 0 332 374 138 7 chr5 21963315 21963578 -177666572 + L2 LINE L2 2556 2783 -530 2078 203 49 79 chr5 21963578 21964149 -177666001 - MLT2B3 LTR ERVL 0 554 1 332 374 138 7 chr5 21964149 21964297 -177665853 + L2 LINE L2 2783 3017 -296 386 248 78 35 chr5 21964331 21964472 -177665678 + L2 LINE L2 3167 3313 0 23 0 0 0 chr5 21965223 21965246 -177664904 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr5 21966292 21966315 -177663835 + (T)n Simple_repeat Simple_repeat 1 23 0 12417 158 51 19 chr5 21966315 21968606 -177661544 + Tigger1 DNA MER2_type 55 2417 -1 257 266 65 78 chr5 21969501 21969655 -177660495 - MARNA DNA Mariner -358 228 77 336 343 41 30 chr5 21969670 21969839 -177660311 + MIR SINE MIR 15 185 -77 26 50 0 0 chr5 21969905 21969945 -177660205 + AT_rich Low_complexity Low_complexity 1 40 0 1160 254 58 29 chr5 21969953 21970296 -177659854 - MLT1A2 LTR MaLR -4 370 18 246 245 19 0 chr5 21971736 21971789 -177658361 - L2 LINE L2 -20 3252 3199 211 226 78 87 chr5 21973713 21973828 -177656322 + L2 LINE L2 3012 3125 -188 1771 154 26 47 chr5 21973851 21974234 -177655916 - THE1C LTR MaLR 0 375 1 563 141 45 58 chr5 21974265 21974421 -177655729 + L1MB7 LINE L1 6031 6184 0 966 337 106 33 chr5 21975720 21976364 -177653786 + L2 LINE L2 2129 2819 -495 198 0 0 0 chr5 21976548 21976570 -177653580 + (TTCC)n Simple_repeat Simple_repeat 1 22 0 711 146 26 32 chr5 21976574 21976839 -177653311 + CT-rich Low_complexity Low_complexity 1 263 0 2164 123 7 0 chr5 21976845 21977155 -177652995 - AluSq SINE Alu -1 312 1 1961 114 23 0 chr5 21977193 21977492 -177652658 - AluSp SINE Alu -2 311 6 339 407 66 4 chr5 21977686 21977944 -177652206 + L2 LINE L2 2493 2766 -548 1106 262 16 50 chr5 21978882 21979382 -177650768 + L1ME3 LINE L1 5295 5777 -385 826 155 8 0 chr5 21979422 21979551 -177650599 - AluJb SINE Alu -30 282 153 341 227 0 13 chr5 21979552 21979627 -177650523 - AluSp SINE Alu -106 197 124 349 284 96 57 chr5 21979635 21979978 -177650172 + L1ME3 LINE L1 5791 6160 -6 216 0 0 0 chr5 21979989 21980013 -177650137 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 449 250 39 0 chr5 21980730 21980834 -177649316 - MLT1D LTR MaLR -5 500 393 21 57 0 0 chr5 21981016 21981051 -177649099 + AT_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 21982100 21982133 -177648017 + AT_rich Low_complexity Low_complexity 1 33 0 277 233 41 0 chr5 21982252 21982325 -177647825 + (CATA)n Simple_repeat Simple_repeat 1 76 0 362 307 41 5 chr5 21982327 21982545 -177647605 - L1MC4 LINE L1 -122 7920 7695 22 0 0 0 chr5 21982646 21982668 -177647482 + AT_rich Low_complexity Low_complexity 1 22 0 1208 159 5 45 chr5 21983065 21983285 -177646865 - AluJb SINE Alu -99 213 3 21 0 0 0 chr5 21983420 21983441 -177646709 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 21984472 21984496 -177645654 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 21986632 21986660 -177643490 + AT_rich Low_complexity Low_complexity 1 28 0 1969 146 21 29 chr5 21986788 21987166 -177642984 - THE1C LTR MaLR 0 375 1 379 282 103 8 chr5 21987252 21987369 -177642781 - MIR SINE MIR -75 187 60 869 218 29 0 chr5 21987517 21987687 -177642463 - FAM SINE Alu 0 175 1 530 358 100 40 chr5 21988384 21988851 -177641299 + L2 LINE L2 2051 2566 -748 2542 36 0 3 chr5 21988851 21989157 -177640993 - AluY SINE Alu -6 305 1 530 358 100 40 chr5 21989157 21989310 -177640840 + L2 LINE L2 2566 2708 -606 186 341 93 66 chr5 21989418 21989644 -177640506 + L2 LINE L2 2736 2967 -347 372 243 142 20 chr5 21989811 21989959 -177640191 - MER52C LTR ERV1 -139 1139 974 411 160 75 0 chr5 21990812 21990918 -177639232 + L1PB4 LINE L1 6042 6155 -1 2214 147 106 3 chr5 21990964 21991351 -177638799 - MSTC LTR MaLR -1 427 1 183 204 0 0 chr5 21991415 21991459 -177638691 + CT-rich Low_complexity Low_complexity 2 45 0 * 242 106 21 0 chr5 21991454 21991501 -177638649 + (TC)n Simple_repeat Simple_repeat 2 49 0 666 212 45 18 chr5 21991975 21992154 -177637996 + MLT1J LTR MaLR 1 150 -259 241 260 68 48 chr5 21992264 21992410 -177637740 + MLT1L LTR MaLR 445 593 -22 222 37 0 0 chr5 21992738 21992765 -177637385 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 630 185 0 25 chr5 21992765 21992884 -177637266 - FLAM_C SINE Alu -25 118 3 23 0 0 0 chr5 21993284 21993307 -177636843 + AT_rich Low_complexity Low_complexity 1 23 0 1024 185 70 33 chr5 21993658 21993928 -177636222 - L1MA10 LINE L1 -1 6333 6054 640 286 58 0 chr5 21993980 21994169 -177635981 - MER20 DNA MER1_type 0 219 20 433 285 80 0 chr5 21994211 21994348 -177635802 - MLT1J1 LTR MaLR -266 180 33 480 102 66 6 chr5 21994573 21994739 -177635411 + (TA)n Simple_repeat Simple_repeat 1 176 0 1435 225 49 28 chr5 21994883 21995270 -177634880 + MSTD LTR MaLR 2 396 0 2085 135 79 15 chr5 21996737 21997077 -177633073 + THE1B LTR MaLR 3 364 0 6897 91 4 8 chr5 21997077 21998030 -177632120 + THE1B-int LTR MaLR 1 949 -631 1437 67 0 0 chr5 21998027 21998207 -177631943 + THE1B-int LTR MaLR 1391 1570 -10 * 1123 128 59 32 chr5 21998207 21998394 -177631756 + THE1B LTR MaLR 173 364 0 247 221 0 15 chr5 21998399 21998467 -177631683 + (TA)n Simple_repeat Simple_repeat 2 68 0 1470 197 18 82 chr5 21999798 22000188 -177629962 - MLT1A1 LTR MaLR 0 365 1 697 237 139 32 chr5 22000335 22000673 -177629477 - MLT1A2 LTR MaLR 0 374 1 862 47 0 0 chr5 22000933 22001040 -177629110 - THE1-int LTR MaLR -1207 373 267 323 255 89 51 chr5 22002376 22002533 -177627617 - MIR SINE MIR -66 196 34 880 215 38 10 chr5 22002582 22002791 -177627359 + L1MB1 LINE L1 5953 6167 -22 912 206 38 10 chr5 22005232 22005441 -177624709 - L1MB1 LINE L1 -22 6167 5953 276 341 116 12 chr5 22007451 22007624 -177622526 + MIR SINE MIR 24 214 -48 255 278 63 63 chr5 22007713 22007904 -177622246 - MIR SINE MIR -58 204 14 23 0 0 0 chr5 22008264 22008287 -177621863 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr5 22008529 22008565 -177621585 + (TG)n Simple_repeat Simple_repeat 2 37 0 1428 93 4 18 chr5 22011468 22011693 -177618457 - L1MA1 LINE L1 -3 6299 6078 3403 218 60 17 chr5 22012400 22012542 -177617608 - L1MB8 LINE L1 -1 6177 6043 2115 116 0 3 chr5 22012542 22012834 -177617316 - AluSc SINE Alu -17 292 2 3403 218 60 17 chr5 22012834 22013926 -177616224 - L1MB8 LINE L1 -135 6043 4900 345 263 15 80 chr5 22013951 22014088 -177616062 + MIR SINE MIR 108 235 -27 2073 138 0 0 chr5 22014313 22014617 -177615533 + AluSc SINE Alu 1 304 -5 1709 168 0 23 chr5 22014705 22015014 -177615136 - AluJb SINE Alu -10 302 1 25 65 0 0 chr5 22016997 22017043 -177613107 + AT_rich Low_complexity Low_complexity 1 46 0 25 0 0 0 chr5 22017162 22017187 -177612963 + AT_rich Low_complexity Low_complexity 1 25 0 307 350 186 4 chr5 22017584 22017864 -177612286 - L3 LINE CR1 0 1577 1247 437 314 116 5 chr5 22018136 22018343 -177611807 - L3 LINE CR1 -368 1209 980 222 237 130 21 chr5 22018697 22018814 -177611336 + MIR SINE MIR 43 174 -88 269 263 13 0 chr5 22019136 22019212 -177610938 + GA-rich Low_complexity Low_complexity 4 80 0 1752 189 117 8 chr5 22019275 22019661 -177610489 + MSTB1 LTR MaLR 1 428 -4 658 203 0 15 chr5 22020307 22020440 -177609710 - FLAM_A SINE Alu -2 140 10 259 352 0 9 chr5 22020542 22020647 -177609503 - L2 LINE L2 0 3313 3210 204 40 0 0 chr5 22021231 22021256 -177608894 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1233 163 5 5 chr5 22021258 22021460 -177608690 - AluJo SINE Alu -30 282 81 226 222 0 0 chr5 22022073 22022136 -177608014 - L1MC4 LINE L1 -1339 6703 6641 4274 72 5 12 chr5 22022136 22022721 -177607429 - L1PA8 LINE L1 -13 6159 5579 929 124 39 0 chr5 22022724 22022877 -177607273 + L1P LINE L1 4793 4951 -1195 23 0 0 0 chr5 22022878 22022901 -177607249 + AT_rich Low_complexity Low_complexity 1 23 0 2408 59 0 10 chr5 22023387 22023692 -177606458 + AluY SINE Alu 1 302 -9 23 33 0 0 chr5 22023855 22023885 -177606265 + AT_rich Low_complexity Low_complexity 1 30 0 2391 55 0 13 chr5 22024590 22024902 -177605248 + AluY SINE Alu 1 308 -3 1189 229 98 33 chr5 22024988 22025354 -177604796 + MLT1B LTR MaLR 1 390 0 2243 111 3 0 chr5 22025427 22025725 -177604425 - AluSq SINE Alu -14 299 1 531 0 0 0 chr5 22025981 22026040 -177604110 + (TA)n Simple_repeat Simple_repeat 1 59 0 315 0 0 0 chr5 22026040 22026075 -177604075 + (TG)n Simple_repeat Simple_repeat 1 35 0 1763 165 32 3 chr5 22027197 22027482 -177602668 + AluSx SINE Alu 1 293 -19 310 350 68 38 chr5 22027768 22028168 -177601982 + MLT1L LTR MaLR 175 586 -29 483 331 124 0 chr5 22028318 22028584 -177601566 + L2 LINE L2 2127 2425 -889 198 312 111 75 chr5 22028623 22028902 -177601248 + L2 LINE L2 2606 2894 -420 200 337 48 53 chr5 22029217 22029404 -177600746 + L2 LINE L2 3090 3275 -38 214 292 28 0 chr5 22032301 22032373 -177597777 + (TATATG)n Simple_repeat Simple_repeat 1 74 0 297 0 0 0 chr5 22032434 22032467 -177597683 + (CA)n Simple_repeat Simple_repeat 2 34 0 197 353 0 14 chr5 22032522 22032603 -177597547 - MIR SINE MIR -58 150 70 357 62 0 0 chr5 22032794 22032842 -177597308 + (CA)n Simple_repeat Simple_repeat 2 49 0 27 49 0 0 chr5 22033786 22033827 -177596323 + AT_rich Low_complexity Low_complexity 1 41 0 359 293 157 15 chr5 22033906 22034104 -177596046 - L1ME LINE L1 -313 5808 5583 23 0 0 0 chr5 22034965 22034988 -177595162 + AT_rich Low_complexity Low_complexity 1 23 0 180 372 12 12 chr5 22035539 22035625 -177594525 - L2 LINE L2 -13 3300 3215 248 301 68 8 chr5 22036664 22036797 -177593353 + L1M4 LINE L1 2448 2588 -3558 24 0 0 0 chr5 22036797 22036821 -177593329 + AT_rich Low_complexity Low_complexity 1 24 0 206 327 0 0 chr5 22039386 22039441 -177590709 + L2 LINE L2 3200 3254 -18 23 0 0 0 chr5 22039705 22039728 -177590422 + AT_rich Low_complexity Low_complexity 1 23 0 525 340 15 30 chr5 22039917 22040179 -177589971 - MIR SINE MIR -3 259 2 542 247 52 72 chr5 22040402 22040461 -177589689 + MIR SINE MIR 41 100 -162 2209 111 0 7 chr5 22040461 22040768 -177589382 - AluSc SINE Alu -4 305 1 542 247 52 72 chr5 22040768 22040902 -177589248 + MIR SINE MIR 100 230 -32 207 324 42 0 chr5 22042737 22042808 -177587342 - L2 LINE L2 -2 3311 3238 1725 109 7 29 chr5 22042883 22043158 -177586992 + AluSg SINE Alu 38 306 -4 2076 144 0 0 chr5 22043169 22043475 -177586675 + AluSx SINE Alu 1 306 -6 5507 150 62 64 chr5 22043606 22044840 -177585310 + Tigger3b DNA MER2_type 1 1231 0 981 262 63 77 chr5 22045877 22046483 -177583667 + MER77 LTR ERV1 119 679 -4 335 131 33 0 chr5 22047172 22047233 -177582917 + LTR60 LTR ERV1 1 63 -523 230 0 33 0 chr5 22047346 22047376 -177582774 + (CA)n Simple_repeat Simple_repeat 2 32 0 1727 147 41 80 chr5 22047410 22047798 -177582352 + THE1C LTR MaLR 1 373 -2 3831 110 79 90 chr5 22047802 22048583 -177581567 + THE1C-int LTR MaLR 3 775 -805 2451 109 0 62 chr5 22048560 22048992 -177581158 + THE1C-int LTR MaLR 1176 1580 0 * 1886 144 61 25 chr5 22048992 22049354 -177580796 + THE1C LTR MaLR 1 375 0 201 340 70 10 chr5 22049492 22049592 -177580558 + L2 LINE L2 3137 3242 -30 469 345 11 6 chr5 22051289 22051463 -177578687 - MIR SINE MIR -75 187 13 32 26 0 0 chr5 22051535 22051574 -177578576 + AT_rich Low_complexity Low_complexity 1 39 0 3160 109 4 0 chr5 22051574 22052043 -177578107 - L1PB2 LINE L1 0 6151 5681 309 293 89 0 chr5 22052045 22052168 -177577982 - L1ME LINE L1 -293 5828 5695 32 43 0 0 chr5 22052194 22052240 -177577910 + AT_rich Low_complexity Low_complexity 1 46 0 186 284 99 25 chr5 22052446 22052527 -177577623 + MIR SINE MIR 48 134 -128 511 123 0 0 chr5 22052823 22052896 -177577254 - MLT1A1 LTR MaLR 0 365 293 930 160 0 0 chr5 22052943 22053087 -177577063 - MLT1A1 LTR MaLR -221 144 1 2554 194 36 1 chr5 22053246 22054019 -177576131 - L1MC3 LINE L1 0 7785 5428 21 36 0 0 chr5 22054702 22054730 -177575420 + AT_rich Low_complexity Low_complexity 1 28 0 409 254 110 44 chr5 22055021 22055407 -177574743 - L1MEc LINE L1 -4554 1878 1501 325 235 18 123 chr5 22055538 22055708 -177574442 - L1MEc LINE L1 -5136 1273 1122 21 0 0 0 chr5 22055912 22055933 -177574217 + AT_rich Low_complexity Low_complexity 1 21 0 835 249 39 53 chr5 22056055 22056340 -177573810 - MLT1A1 LTR MaLR -84 281 1 679 254 69 78 chr5 22056464 22056978 -177573172 - MLT1E1 LTR MaLR -10 644 1 349 336 78 33 chr5 22057154 22057398 -177572752 + MIR SINE MIR 8 262 0 216 67 0 0 chr5 22057578 22057608 -177572542 + (CAA)n Simple_repeat Simple_repeat 2 31 0 383 282 50 77 chr5 22058469 22058650 -177571500 + MER5B DNA MER1_type 3 178 0 1955 192 0 26 chr5 22059441 22059831 -177570319 - MLT1B LTR MaLR -7 383 4 202 216 0 0 chr5 22059831 22059868 -177570282 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 279 0 0 0 chr5 22059868 22059899 -177570251 + (CA)n Simple_repeat Simple_repeat 2 32 0 1654 223 58 24 chr5 22059903 22060315 -177569835 + MLT1C LTR MaLR 42 467 0 23 54 0 0 chr5 22060344 22060381 -177569769 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr5 22060657 22060684 -177569466 + AT_rich Low_complexity Low_complexity 1 27 0 363 311 56 22 chr5 22061412 22061592 -177568558 + MIR SINE MIR 31 216 -46 181 340 52 26 chr5 22062180 22062333 -177567817 + MIR SINE MIR 106 262 0 319 322 49 28 chr5 22062422 22062565 -177567585 + MIR SINE MIR 21 166 -96 28 29 0 0 chr5 22062808 22062843 -177567307 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 22065007 22065029 -177565121 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 22065907 22065927 -177564223 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2144 124 0 3 chr5 22066330 22066636 -177563514 + AluSx SINE Alu 6 310 -2 218 103 0 26 chr5 22066647 22066686 -177563464 + (GAAAA)n Simple_repeat Simple_repeat 5 42 0 251 264 32 13 chr5 22067075 22067230 -177562920 + (TA)n Simple_repeat Simple_repeat 2 159 0 1307 219 73 76 chr5 22067243 22067687 -177562463 + MLT2B1 LTR ERVL 1 470 -45 444 82 0 0 chr5 22067687 22067748 -177562402 + (TA)n Simple_repeat Simple_repeat 2 62 0 1307 219 73 76 chr5 22067748 22067794 -177562356 + MLT2B1 LTR ERVL 470 515 0 261 274 0 24 chr5 22068396 22068480 -177561670 - L1ME LINE L1 -477 5644 5563 2509 59 0 0 chr5 22068574 22068877 -177561273 + AluY SINE Alu 1 303 -8 536 249 69 29 chr5 22069250 22069423 -177560727 + MIR SINE MIR 68 247 -15 41 0 0 0 chr5 22069437 22069478 -177560672 + AT_rich Low_complexity Low_complexity 1 41 0 3688 119 9 0 chr5 22069798 22070360 -177559790 + L1PA13 LINE L1 5597 6163 0 1110 177 109 53 chr5 22071768 22072051 -177558099 + AluJo SINE Alu 1 299 -3 281 365 119 25 chr5 22074644 22074929 -177555221 - L2 LINE L2 -436 2878 2567 1311 140 48 40 chr5 22075238 22075488 -177554662 + THE1B LTR MaLR 113 364 0 5279 134 5 0 chr5 22075488 22076289 -177553861 + THE1B-int LTR MaLR 1 805 -775 257 267 47 0 chr5 22076391 22076477 -177553673 + MLT1D LTR MaLR 163 252 -253 197 62 0 31 chr5 22076484 22076516 -177553634 + (TA)n Simple_repeat Simple_repeat 2 32 0 361 189 22 0 chr5 22077051 22077141 -177553009 + (TA)n Simple_repeat Simple_repeat 2 93 0 234 75 100 0 chr5 22077292 22077332 -177552818 - L1MA6 LINE L1 -349 5951 5908 2754 179 30 4 chr5 22077503 22078063 -177552087 - L1MA6 LINE L1 -401 5899 5325 1703 174 41 41 chr5 22078278 22078641 -177551509 + MLT1A1 LTR MaLR 1 363 -2 21 0 0 0 chr5 22078763 22078784 -177551366 + AT_rich Low_complexity Low_complexity 1 21 0 316 273 159 15 chr5 22079038 22079170 -177550980 + MIR SINE MIR 73 223 -39 21 0 0 0 chr5 22079614 22079635 -177550515 + AT_rich Low_complexity Low_complexity 1 21 0 237 186 72 41 chr5 22079666 22079763 -177550387 + Charlie1 DNA MER1_type 2575 2674 -87 34 65 0 0 chr5 22080010 22080072 -177550078 + AT_rich Low_complexity Low_complexity 1 62 0 574 186 0 0 chr5 22080072 22080174 -177549976 - FLAM_A SINE Alu -23 119 18 237 255 0 0 chr5 22080259 22080310 -177549840 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 524 305 68 39 chr5 22080452 22080844 -177549306 + L1MC/D LINE L1 5258 5664 -747 5352 168 46 7 chr5 22081249 22082307 -177547843 + L1MA4 LINE L1 5196 6289 -11 29 0 0 0 chr5 22082307 22082336 -177547814 + AT_rich Low_complexity Low_complexity 1 29 0 231 368 9 9 chr5 22083697 22083811 -177546339 - MIR3 SINE MIR -6 202 89 2073 84 0 11 chr5 22084287 22084615 -177545535 - AluY SINE Alu 0 325 1 260 253 27 0 chr5 22084719 22084794 -177545356 - MER67D LTR ERV1 -4 510 434 * 781 284 125 17 chr5 22084768 22085120 -177545030 - MER31B LTR ERV1 -76 390 1 227 167 24 0 chr5 22085234 22085276 -177544874 - MLT1J LTR MaLR -336 175 133 472 212 119 38 chr5 22085749 22086051 -177544099 - MER69 DNA AcHobo -6 2520 2187 228 214 36 24 chr5 22086110 22086194 -177543956 - MER69 DNA AcHobo -449 2077 1993 * 439 293 38 0 chr5 22086180 22086313 -177543837 - MER69 DNA AcHobo -1861 665 528 2223 90 0 13 chr5 22086377 22086678 -177543472 - AluY SINE Alu -14 297 1 2084 99 13 16 chr5 22086823 22087126 -177543024 - AluSq SINE Alu -11 302 1 1774 148 0 14 chr5 22087580 22087877 -177542273 - AluSc SINE Alu 0 309 17 206 86 71 57 chr5 22087966 22088036 -177542114 + (TA)n Simple_repeat Simple_repeat 1 71 0 2096 292 129 20 chr5 22088044 22089246 -177540904 - L2 LINE L2 -13 3300 1967 312 27 0 0 chr5 22091085 22091122 -177539028 + (TG)n Simple_repeat Simple_repeat 1 37 0 181 152 22 65 chr5 22092933 22092979 -177537171 - L2 LINE L2 0 3272 3229 209 373 32 32 chr5 22093055 22093181 -177536969 - L2 LINE L2 -193 3120 2995 876 308 36 98 chr5 22093344 22094010 -177536140 - L2 LINE L2 -650 2664 2040 233 288 27 0 chr5 22094086 22094159 -177535991 - L1MC/D LINE L1 -2211 5597 5523 21 36 0 0 chr5 22095166 22095194 -177534956 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 22095703 22095731 -177534419 + AT_rich Low_complexity Low_complexity 1 28 0 1163 116 12 0 chr5 22095879 22096052 -177534098 - AluSg/x SINE Alu 0 312 138 535 339 117 31 chr5 22096543 22096989 -177533161 - L1MEc LINE L1 -721 1855 1325 22 56 0 0 chr5 22099818 22099854 -177530296 + AT_rich Low_complexity Low_complexity 1 36 0 819 251 16 11 chr5 22102907 22103090 -177527060 + MER5A DNA MER1_type 6 189 0 767 227 92 19 chr5 22103099 22103306 -177526844 + MER58A DNA MER1_type 2 223 -1 464 267 42 36 chr5 22103605 22103770 -177526380 + MLT1I LTR MaLR 244 409 0 200 284 102 0 chr5 22103999 22104087 -177526063 - L2 LINE L2 -559 2755 2659 255 281 0 0 chr5 22104538 22104602 -177525548 - MLT1I LTR MaLR -242 167 104 227 240 104 10 chr5 22105059 22105155 -177524995 - LTR16C LTR ERVL -133 358 254 1854 171 3 0 chr5 22105470 22105779 -177524371 + AluSx SINE Alu 1 310 -2 235 324 139 0 chr5 22106022 22106130 -177524020 - MIR SINE MIR -14 248 126 184 148 11 227 chr5 22106819 22106882 -177523268 - MIR SINE MIR -57 151 110 2251 103 0 3 chr5 22106882 22107182 -177522968 + AluSx SINE Alu 5 303 -9 184 148 11 227 chr5 22107182 22107206 -177522944 - MIR SINE MIR -98 110 83 356 157 68 20 chr5 22107684 22107831 -177522319 + (TA)n Simple_repeat Simple_repeat 2 155 0 21 0 0 0 chr5 22107831 22107852 -177522298 + AT_rich Low_complexity Low_complexity 1 21 0 224 339 68 31 chr5 22109666 22109858 -177520292 + L3 LINE CR1 845 1043 -534 353 326 54 0 chr5 22109887 22110016 -177520134 + L3 LINE CR1 1211 1346 -231 266 127 0 48 chr5 22110100 22110163 -177519987 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 2347 241 92 23 chr5 22110329 22111567 -177518583 - L1ME1 LINE L1 -6 6160 4850 202 262 49 0 chr5 22112514 22112575 -177517575 + A-rich Low_complexity Low_complexity 2 65 0 286 297 0 33 chr5 22112834 22112925 -177517225 + MLT1H LTR MaLR 455 542 -7 2050 129 0 3 chr5 22113183 22113486 -177516664 - AluSq SINE Alu -11 302 1 18263 29 3 0 chr5 22115920 22118187 -177511963 - L1P1 LINE L1 -680 5475 3203 932 152 91 0 chr5 22118187 22118352 -177511798 - THE1B LTR MaLR -183 181 2 408 125 0 0 chr5 22118582 22118646 -177511504 + (TA)n Simple_repeat Simple_repeat 2 65 0 228 152 0 0 chr5 22118646 22118692 -177511458 - LTR66 LTR ERVL -171 439 394 185 217 12 0 chr5 22118692 22118775 -177511375 + (TA)n Simple_repeat Simple_repeat 2 85 0 21 71 0 0 chr5 22119240 22119282 -177510868 + AT_rich Low_complexity Low_complexity 1 42 0 30 27 0 0 chr5 22119569 22119606 -177510544 + AT_rich Low_complexity Low_complexity 1 37 0 241 220 170 64 chr5 22121796 22121937 -177508213 - MLT1J1 LTR MaLR -22 424 269 256 257 14 0 chr5 22122329 22122399 -177507751 + MIR SINE MIR 89 159 -103 2208 115 0 0 chr5 22122845 22123149 -177507001 - AluSx SINE Alu -6 306 3 1643 267 83 20 chr5 22124660 22125166 -177504984 - MLT1E LTR MaLR -30 563 26 836 281 32 5 chr5 22126089 22126310 -177503840 + MER45R DNA AcHobo 1 227 -1354 250 154 0 0 chr5 22126385 22126424 -177503726 + AluJ/FLAM SINE Alu 20 58 -244 343 342 40 7 chr5 22126630 22126779 -177503371 + LTR33 LTR ERVL 12 165 -356 233 224 106 75 chr5 22126846 22127007 -177503143 + LTR33 LTR ERVL 304 469 -52 300 200 0 0 chr5 22127461 22127531 -177502619 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 255 272 0 22 chr5 22127533 22127625 -177502525 + L1MC4 LINE L1 6614 6703 -1339 492 146 0 0 chr5 22127632 22127721 -177502429 + (TATG)n Simple_repeat Simple_repeat 4 92 0 225 0 0 0 chr5 22127725 22127750 -177502400 + (CA)n Simple_repeat Simple_repeat 2 26 0 1413 179 10 34 chr5 22127754 22128051 -177502099 - AluJo SINE Alu -10 302 13 30 27 0 0 chr5 22129040 22129077 -177501073 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr5 22129208 22129231 -177500919 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr5 22129437 22129475 -177500675 + AT_rich Low_complexity Low_complexity 1 38 0 1854 128 19 29 chr5 22129750 22130062 -177500088 + AluSc SINE Alu 1 309 0 3092 144 55 48 chr5 22130567 22131165 -177498985 + MER7C DNA MER2_type 1 602 0 6897 58 4 14 chr5 22131552 22132005 -177498145 + L1PA7 LINE L1 5020 5476 -678 2636 23 0 7 chr5 22132005 22132309 -177497841 + AluY SINE Alu 1 302 -9 6897 58 4 14 chr5 22132309 22132998 -177497152 + L1PA7 LINE L1 5476 6153 -1 459 312 15 7 chr5 22133500 22133670 -177496480 - L1MC/D LINE L1 -528 5638 5486 1570 209 42 35 chr5 22133847 22134248 -177495902 + MLT2C2 LTR ERVL 1 404 -60 1127 246 88 33 chr5 22134764 22135162 -177494988 - LTR52 LTR ERVL 0 421 2 402 294 47 58 chr5 22135892 22136167 -177493983 + L1MEd LINE L1 495 766 -5353 2482 50 3 0 chr5 22136238 22136537 -177493613 + AluY SINE Alu 1 300 -11 225 0 0 0 chr5 22136969 22136994 -177493156 + (TA)n Simple_repeat Simple_repeat 2 26 0 4167 183 32 15 chr5 22137376 22138251 -177491899 + L1MC1 LINE L1 5444 6333 0 210 256 37 0 chr5 22138792 22138874 -177491276 + (TATG)n Simple_repeat Simple_repeat 4 88 0 1407 214 0 11 chr5 22139487 22139796 -177490354 - AluJb SINE Alu 0 309 4 268 144 72 41 chr5 22140095 22140192 -177489958 - Charlie1 DNA MER1_type -87 2674 2575 21 0 0 0 chr5 22140223 22140244 -177489906 + AT_rich Low_complexity Low_complexity 1 21 0 307 290 160 8 chr5 22140688 22140819 -177489331 - MIR SINE MIR -39 223 73 21 0 0 0 chr5 22141073 22141094 -177489056 + AT_rich Low_complexity Low_complexity 1 21 0 1639 172 44 52 chr5 22141216 22141582 -177488568 - MLT1A1 LTR MaLR -2 363 1 2702 10 0 10 chr5 22141810 22142124 -177488026 + AluYa5 SINE Alu 1 311 0 2933 159 29 4 chr5 22142125 22142678 -177487472 + L1MA6 LINE L1 5333 5899 -401 234 75 100 0 chr5 22142849 22142889 -177487261 + L1MA6 LINE L1 5908 5951 -349 361 189 22 0 chr5 22143040 22143130 -177487020 + (TA)n Simple_repeat Simple_repeat 2 93 0 197 62 0 31 chr5 22143665 22143697 -177486453 + (TA)n Simple_repeat Simple_repeat 1 31 0 1104 215 18 0 chr5 22143704 22143927 -177486223 - MLT1D LTR MaLR -253 252 26 642 370 95 7 chr5 22145222 22145674 -177484476 + L3 LINE CR1 665 1156 -421 2168 109 0 3 chr5 22146244 22146546 -177483604 + AluSq SINE Alu 2 302 -11 1773 160 41 39 chr5 22146692 22147055 -177483095 + THE1B LTR MaLR 1 364 0 27 62 0 0 chr5 22147966 22148014 -177482136 + AT_rich Low_complexity Low_complexity 1 48 0 240 266 37 83 chr5 22148032 22148141 -177482009 + L3 LINE CR1 1242 1345 -232 32 57 0 0 chr5 22148757 22148810 -177481340 + AT_rich Low_complexity Low_complexity 1 53 0 241 270 0 0 chr5 22149432 22149495 -177480655 + T-rich Low_complexity Low_complexity 1 63 0 277 217 46 23 chr5 22149891 22150066 -177480084 + (TA)n Simple_repeat Simple_repeat 2 180 0 32 43 0 0 chr5 22150087 22150133 -177480017 + AT_rich Low_complexity Low_complexity 1 46 0 731 276 151 23 chr5 22150603 22150971 -177479179 + MLT1F1 LTR MaLR 39 452 -115 48 32 0 0 chr5 22151004 22151066 -177479084 + AT_rich Low_complexity Low_complexity 1 62 0 252 258 0 15 chr5 22151069 22151135 -177479015 + MLT1F1 LTR MaLR 478 542 0 280 306 0 0 chr5 22151345 22151430 -177478720 + (AATAG)n Simple_repeat Simple_repeat 4 88 0 257 0 30 0 chr5 22151476 22151509 -177478641 + (TG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr5 22151614 22151635 -177478515 + AT_rich Low_complexity Low_complexity 1 21 0 1855 131 0 4 chr5 22151661 22151928 -177478222 + AluSq SINE Alu 46 311 -2 414 294 36 31 chr5 22152000 22152299 -177477851 - MER68 LTR ERV1 -199 363 1 3072 132 7 0 chr5 22152327 22152791 -177477359 - L1PA13 LINE L1 -177 5986 5520 1695 195 7 0 chr5 22152818 22153121 -177477029 + AluJb SINE Alu 1 305 -7 275 269 112 30 chr5 22153698 22153895 -177476255 + MER113 DNA MER1_type? 67 279 -242 1824 160 55 25 chr5 22156024 22156386 -177473764 - THE1C LTR MaLR -2 373 1 2346 131 15 32 chr5 22156386 22156790 -177473360 - THE1C-int LTR MaLR 0 1580 1184 339 218 0 0 chr5 22157861 22157915 -177472235 - AluJ/FRAM SINE Alu -20 282 229 1287 80 0 0 chr5 22157915 22158077 -177472073 + THE1C LTR MaLR 1 162 -213 1442 194 3 41 chr5 22158484 22158538 -177471612 - AluJo SINE Alu -30 282 228 2303 134 5 18 chr5 22158538 22158918 -177471232 + THE1C LTR MaLR 1 375 0 1442 194 3 41 chr5 22158918 22159156 -177470994 - AluJo SINE Alu -84 228 1 1812 179 32 16 chr5 22159382 22159751 -177470399 - THE1C LTR MaLR 0 375 1 198 0 0 0 chr5 22160163 22160185 -177469965 + (TAAAAA)n Simple_repeat Simple_repeat 1 22 0 21 57 0 0 chr5 22160493 22160528 -177469622 + AT_rich Low_complexity Low_complexity 1 35 0 1858 135 32 0 chr5 22161155 22161436 -177468714 + AluSx SINE Alu 1 290 -22 255 133 0 0 chr5 22161620 22161665 -177468485 + (CA)n Simple_repeat Simple_repeat 2 46 0 205 161 0 0 chr5 22162811 22162842 -177467308 + (CA)n Simple_repeat Simple_repeat 2 32 0 2632 82 3 3 chr5 22163132 22163487 -177466663 - THE1A LTR MaLR 0 355 1 21 0 0 0 chr5 22163511 22163532 -177466618 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 22163739 22163762 -177466388 + AT_rich Low_complexity Low_complexity 1 23 0 297 206 31 21 chr5 22164148 22164245 -177465905 + (TA)n Simple_repeat Simple_repeat 1 98 0 5241 174 25 8 chr5 22164269 22164472 -177465678 - L1PA16 LINE L1 -14 6152 5954 1970 116 65 34 chr5 22164472 22164825 -177465325 - THE1B LTR MaLR 0 364 1 5241 174 25 8 chr5 22164825 22166372 -177463778 - L1PA16 LINE L1 -212 5954 4375 492 306 71 37 chr5 22167548 22167816 -177462334 + L2 LINE L2 2873 3149 -164 498 278 32 0 chr5 22167964 22168090 -177462060 - MLT2D LTR ERVL -48 366 237 21 0 0 0 chr5 22168299 22168320 -177461830 + AT_rich Low_complexity Low_complexity 1 21 0 301 235 15 0 chr5 22168378 22168446 -177461704 + MIR3 SINE MIR 121 189 -19 364 237 80 27 chr5 22168522 22168647 -177461503 - MER90 LTR ERV1 0 614 445 2114 180 42 75 chr5 22170209 22170781 -177459369 - MLT2B3 LTR ERVL 0 554 2 189 263 26 66 chr5 22171442 22171518 -177458632 + L2 LINE L2 3193 3265 -7 24 0 0 0 chr5 22172025 22172049 -177458101 + AT_rich Low_complexity Low_complexity 1 24 0 1669 196 27 9 chr5 22172914 22173250 -177456900 + MER2 DNA MER2_type 3 344 0 345 293 104 21 chr5 22173372 22173966 -177456184 - L1ME2 LINE L1 -258 5906 5265 1499 242 35 12 chr5 22174948 22175378 -177454772 - L1MC4 LINE L1 -396 7646 7207 211 216 0 0 chr5 22175398 22175449 -177454701 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 402 288 133 51 chr5 22175464 22175780 -177454370 + L1MC4 LINE L1 7695 8036 -6 545 277 66 51 chr5 22176781 22177055 -177453095 - MER110 LTR ERV1 -48 443 166 228 244 13 39 chr5 22177132 22177210 -177452940 - MER110A LTR ERV1 -298 170 95 249 57 0 0 chr5 22177903 22177938 -177452212 + (TG)n Simple_repeat Simple_repeat 2 36 0 2302 110 0 0 chr5 22179160 22179470 -177450680 - AluSg SINE Alu 0 310 1 355 309 41 0 chr5 22179485 22179582 -177450568 - L2 LINE L2 -14 3299 3199 359 279 12 0 chr5 22179661 22179747 -177450403 - MER110 LTR ERV1 0 491 405 2058 181 38 20 chr5 22179747 22180146 -177450004 + MLT2D LTR ERVL 1 406 -8 848 289 63 38 chr5 22180150 22180544 -177449606 - MER110 LTR ERV1 -83 408 5 2264 95 0 0 chr5 22182894 22183188 -177446962 - AluSg1 SINE Alu -15 294 1 240 264 46 46 chr5 22183640 22183727 -177446423 - L2 LINE L2 -1 3312 3226 258 105 0 0 chr5 22183731 22183769 -177446381 + (T)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr5 22183897 22183919 -177446231 + AT_rich Low_complexity Low_complexity 1 22 0 387 245 108 22 chr5 22185842 22185981 -177444169 + L3b LINE CR1 1224 1374 -209 211 194 0 0 chr5 22186126 22186162 -177443988 + (TATG)n Simple_repeat Simple_repeat 4 39 0 632 301 79 86 chr5 22186210 22186416 -177443734 + L2 LINE L2 2615 2821 -492 1513 70 10 10 chr5 22186416 22186616 -177443534 - AluY SINE Alu -13 298 99 632 301 79 86 chr5 22186616 22186995 -177443155 + L2 LINE L2 2821 3199 -114 2590 26 0 10 chr5 22186995 22187308 -177442842 + AluYa5 SINE Alu 2 311 0 632 301 79 86 chr5 22187308 22187389 -177442761 + L2 LINE L2 3199 3279 -34 7242 45 0 6 chr5 22188122 22189056 -177441094 + L1PA4 LINE L1 5226 6154 -1 1049 118 59 38 chr5 22189057 22189243 -177440907 + THE1B LTR MaLR 175 364 0 1814 145 75 28 chr5 22189248 22189606 -177440544 + THE1C LTR MaLR 1 375 0 428 267 68 23 chr5 22189689 22189937 -177440213 + L1MDa LINE L1 1816 2044 -857 24 53 0 0 chr5 22190107 22190145 -177440005 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 22190362 22190385 -177439765 + AT_rich Low_complexity Low_complexity 1 23 0 723 288 53 109 chr5 22190766 22191703 -177438447 - L2 LINE L2 0 3313 2419 1882 144 47 39 chr5 22191715 22192076 -177438074 + THE1B LTR MaLR 1 364 0 6283 102 15 91 chr5 22192076 22193192 -177436958 + THE1B-int LTR MaLR 1 1031 -549 201 323 0 0 chr5 22193213 22193275 -177436875 - MIR SINE MIR -181 81 20 26 30 0 0 chr5 22193614 22193647 -177436503 + AT_rich Low_complexity Low_complexity 1 33 0 210 345 99 35 chr5 22193945 22194177 -177435973 + L3 LINE CR1 483 729 -848 259 356 51 8 chr5 22194806 22194924 -177435226 + MIR SINE MIR 4 126 -136 22 0 0 0 chr5 22196148 22196170 -177433980 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr5 22196408 22196444 -177433706 + AT_rich Low_complexity Low_complexity 1 36 0 372 22 0 0 chr5 22197008 22197053 -177433097 + (TG)n Simple_repeat Simple_repeat 2 46 0 2028 108 0 24 chr5 22197271 22197567 -177432583 + AluSg1 SINE Alu 1 289 -20 469 322 74 17 chr5 22197762 22197992 -177432158 + MIR SINE MIR 19 261 -1 22 0 0 0 chr5 22198580 22198602 -177431548 + AT_rich Low_complexity Low_complexity 1 22 0 199 186 0 43 chr5 22200473 22200543 -177429607 + A-rich Low_complexity Low_complexity 2 68 0 2196 118 0 22 chr5 22201854 22202193 -177427957 - AluSg SINE Alu 0 332 1 1583 152 57 30 chr5 22202804 22203100 -177427050 + AluJo SINE Alu 4 307 -5 2306 77 0 3 chr5 22203200 22203500 -177426650 - AluY SINE Alu -12 299 1 868 320 22 30 chr5 22203644 22204007 -177426143 + LTR16A LTR ERVL 89 448 -2 323 360 86 40 chr5 22204533 22205186 -177424964 + ERVL LTR ERVL 4274 4956 -808 961 186 16 26 chr5 22205673 22205867 -177424283 - L1MA7 LINE L1 -535 5756 5565 2394 169 39 14 chr5 22205867 22206267 -177423883 + L1MA7 LINE L1 5767 6186 -105 2533 122 3 11 chr5 22206267 22206645 -177423505 - THE1C LTR MaLR 0 375 1 2394 169 39 14 chr5 22206645 22206750 -177423400 + L1MA7 LINE L1 6186 6287 -4 559 281 69 10 chr5 22206799 22207002 -177423148 + LTR16A LTR ERVL 1 215 -235 883 122 6 58 chr5 22207021 22207177 -177422973 - Charlie3 DNA MER1_type -4 2706 2559 1157 239 99 18 chr5 22207632 22207966 -177422184 + MLT1A2 LTR MaLR 1 361 -13 4297 240 25 68 chr5 22207979 22208216 -177421934 + MLT1A2-int LTR MaLR 1 247 -1124 829 90 53 0 chr5 22208216 22208349 -177421801 + L1PA12 LINE L1 6028 6167 -1 4297 240 25 68 chr5 22208349 22209510 -177420640 + MLT1A2-int LTR MaLR 247 1339 -32 1057 230 50 66 chr5 22209540 22209936 -177420214 + MLT1B LTR MaLR 1 390 0 407 132 0 3 chr5 22209968 22210040 -177420110 + MLT1B-int LTR MaLR 11 81 -1570 480 35 0 0 chr5 22210379 22210437 -177419713 + (TG)n Simple_repeat Simple_repeat 1 58 0 1907 124 0 11 chr5 22210437 22210719 -177419431 - AluSx SINE Alu -33 279 1 324 308 74 52 chr5 22210741 22211066 -177419084 - L1M4 LINE L1 -2921 3225 2894 345 303 174 13 chr5 22211968 22212123 -177418027 - MER5A DNA MER1_type -1 188 9 2397 85 0 0 chr5 22212644 22212939 -177417211 + AluSg SINE Alu 1 295 -15 410 343 62 0 chr5 22213718 22213864 -177416286 + MIR SINE MIR 37 191 -71 673 347 85 58 chr5 22215471 22216286 -177413864 + L2 LINE L2 2016 2852 -462 259 350 92 48 chr5 22216338 22216675 -177413475 + L2 LINE L2 2929 3280 -33 230 323 39 24 chr5 22216900 22217027 -177413123 + MIR SINE MIR 124 252 -10 710 250 29 0 chr5 22217106 22217278 -177412872 + MER45A DNA AcHobo 1 177 -1 239 173 19 0 chr5 22217650 22217702 -177412448 + (TA)n Simple_repeat Simple_repeat 2 54 0 771 261 41 15 chr5 22218109 22218304 -177411846 - MER58A DNA MER1_type -2 222 23 23 0 0 0 chr5 22218370 22218393 -177411757 + AT_rich Low_complexity Low_complexity 1 23 0 243 331 38 11 chr5 22218519 22218703 -177411447 + MARNA DNA Mariner 201 389 -197 429 20 0 0 chr5 22219423 22219473 -177410677 + (TG)n Simple_repeat Simple_repeat 1 50 0 2209 114 7 0 chr5 22219770 22220076 -177410074 + AluSx SINE Alu 1 308 -4 1839 118 16 26 chr5 22220673 22220978 -177409172 + AluSq SINE Alu 1 302 -11 1745 157 7 21 chr5 22221354 22221641 -177408509 + AluSc SINE Alu 1 283 -26 369 58 0 0 chr5 22221642 22221694 -177408456 + (CA)n Simple_repeat Simple_repeat 2 53 0 1707 298 24 26 chr5 22221805 22222422 -177407728 - MLT2E LTR ERVL -2 626 11 339 345 100 31 chr5 22224444 22224763 -177405387 + L3 LINE CR1 318 658 -919 780 332 18 25 chr5 22226104 22226381 -177403769 + LTR16A LTR ERVL 167 441 -9 345 47 0 0 chr5 22226401 22226444 -177403706 + (CA)n Simple_repeat Simple_repeat 2 44 0 312 314 139 25 chr5 22226854 22227099 -177403051 - MLT1J1 LTR MaLR -173 273 1 663 195 12 41 chr5 22227691 22227860 -177402290 - L1MB2 LINE L1 -17 6154 5991 2148 74 19 42 chr5 22228279 22228588 -177401562 - AluY SINE Alu -3 308 7 764 253 82 17 chr5 22228767 22229072 -177401078 - MSTD LTR MaLR -27 368 1 2311 86 0 13 chr5 22229225 22229526 -177400624 + AluY SINE Alu 1 297 -14 430 293 38 0 chr5 22229590 22229723 -177400427 + MER69 DNA AcHobo 528 665 -1861 444 212 119 38 chr5 22229852 22230154 -177399996 + MER69 DNA AcHobo 2187 2520 -6 232 368 9 9 chr5 22230726 22230840 -177399310 + MIR3 SINE MIR 89 202 -6 29 0 0 0 chr5 22232199 22232228 -177397922 + AT_rich Low_complexity Low_complexity 1 29 0 5297 168 46 7 chr5 22232228 22233286 -177396864 - L1MA4 LINE L1 -11 6289 5196 517 308 71 41 chr5 22233691 22234083 -177396067 - L1MB2 LINE L1 -747 5612 5258 237 255 0 0 chr5 22234225 22234276 -177395874 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 586 186 0 0 chr5 22234361 22234463 -177395687 + FLAM_A SINE Alu 18 119 -23 34 65 0 0 chr5 22234463 22234525 -177395625 + AT_rich Low_complexity Low_complexity 1 62 0 385 292 111 68 chr5 22234581 22234603 -177395547 - L1MB2 LINE L1 -1724 4422 4402 2226 122 0 0 chr5 22234603 22234907 -177395243 + AluSx SINE Alu 1 304 -8 385 292 111 68 chr5 22234907 22235486 -177394664 - L1MB2 LINE L1 -1744 4402 3795 4356 128 26 12 chr5 22235651 22236900 -177393250 + HERV9 LTR ERV1 5832 7121 -1278 1517 196 13 64 chr5 22237051 22237428 -177392722 - L1MB8 LINE L1 -258 5920 5563 3763 183 4 38 chr5 22237428 22238146 -177392004 - MER52A LTR ERV1 0 1755 1062 201 39 0 0 chr5 22240783 22240809 -177389341 + (CAA)n Simple_repeat Simple_repeat 2 27 0 237 33 0 0 chr5 22242574 22242604 -177387546 + (TTTAG)n Simple_repeat Simple_repeat 3 32 0 2473 61 0 0 chr5 22242746 22243043 -177387107 + AluY SINE Alu 1 297 -14 2704 228 51 61 chr5 22243254 22244120 -177386030 - MER52A LTR ERV1 -728 1027 1 1057 229 71 95 chr5 22244123 22246193 -177383957 - L1MB8 LINE L1 -621 5563 3458 2603 97 33 3 chr5 22246193 22246583 -177383567 + L1PA13 LINE L1 5756 6157 -6 1057 229 71 95 chr5 22246583 22247290 -177382860 - L1MB8 LINE L1 -2726 3458 2735 876 206 53 123 chr5 22247297 22247656 -177382494 - MLT1A1 LTR MaLR -24 341 8 260 237 0 0 chr5 22247671 22247730 -177382420 - L1MB8 LINE L1 -3424 2722 2664 1533 194 52 52 chr5 22249117 22249504 -177380646 - MLT1B LTR MaLR 0 390 4 705 282 100 38 chr5 22250490 22250830 -177379320 + L3 LINE CR1 1201 1561 -16 191 377 65 29 chr5 22251179 22251317 -177378833 + L2 LINE L2 3171 3313 0 26 0 0 0 chr5 22252111 22252137 -177378013 + AT_rich Low_complexity Low_complexity 1 26 0 265 319 88 35 chr5 22253933 22254275 -177375875 + HAL1 LINE L1 1197 1556 -951 599 250 12 6 chr5 22254891 22255059 -177375091 - MER3 DNA MER1_type -87 122 1 25 31 0 0 chr5 22255076 22255108 -177375042 + AT_rich Low_complexity Low_complexity 1 32 0 1073 201 91 77 chr5 22255131 22255494 -177374656 - MLT1A2 LTR MaLR -4 370 3 2216 118 0 0 chr5 22257472 22257776 -177372374 + AluSx SINE Alu 1 304 -8 2110 126 49 20 chr5 22258832 22259182 -177370968 - THE1B LTR MaLR -4 360 1 321 346 15 8 chr5 22259344 22259477 -177370673 + MIR SINE MIR 1 134 -128 248 109 0 22 chr5 22259484 22259530 -177370620 + (CAT)n Simple_repeat Simple_repeat 2 46 0 237 219 0 0 chr5 22260053 22260126 -177370024 + (CAT)n Simple_repeat Simple_repeat 3 75 0 4442 134 6 6 chr5 22260451 22261149 -177369001 - L1P LINE L1 -1754 4392 3694 276 30 0 0 chr5 22261149 22261182 -177368968 + (TTG)n Simple_repeat Simple_repeat 1 33 0 6070 76 32 8 chr5 22261195 22262748 -177367402 + L1PA8A LINE L1 4553 6125 -6 22 0 0 0 chr5 22263092 22263114 -177367036 + AT_rich Low_complexity Low_complexity 1 22 0 712 223 121 64 chr5 22263963 22264367 -177365783 - MSTC LTR MaLR 0 428 2 237 338 58 22 chr5 22264368 22264507 -177365643 + L2 LINE L2 2213 2356 -958 2495 124 6 3 chr5 22264508 22264871 -177365279 - THE1B LTR MaLR 0 364 1 240 122 0 0 chr5 22264949 22264990 -177365160 + (CA)n Simple_repeat Simple_repeat 2 42 0 361 366 52 6 chr5 22265057 22265229 -177364921 + L2 LINE L2 2525 2704 -610 22 56 0 0 chr5 22265329 22265365 -177364785 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr5 22265472 22265500 -177364650 + AT_rich Low_complexity Low_complexity 1 28 0 227 333 0 12 chr5 22265716 22265797 -177364353 + L2 LINE L2 3234 3313 0 194 296 0 0 chr5 22265778 22265832 -177364318 - L2 LINE L2 -803 2511 2458 * 207 0 0 0 chr5 22266245 22266268 -177363882 + (ATG)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr5 22267770 22267792 -177362358 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 22268938 22268960 -177361190 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 22269045 22269069 -177361081 + AT_rich Low_complexity Low_complexity 1 24 0 1914 158 3 0 chr5 22269159 22269469 -177360681 - AluSx SINE Alu -1 311 1 1646 211 118 10 chr5 22270120 22270536 -177359614 - LOR1b LTR ERV1 0 461 1 31 58 0 0 chr5 22270646 22270698 -177359452 + AT_rich Low_complexity Low_complexity 1 52 0 2514 180 20 14 chr5 22270857 22271367 -177358783 + LTR10D LTR ERV1 1 513 0 306 259 103 9 chr5 22271388 22271504 -177358646 + MIR SINE MIR 47 173 -89 789 250 116 16 chr5 22271555 22271867 -177358283 + MER57B LTR ERV1 3 369 -65 259 170 0 21 chr5 22271876 22271923 -177358227 + LTR12 LTR ERV1 54 99 -615 * 16149 103 26 8 chr5 22271921 22274267 -177355883 + HERV9 LTR ERV1 3357 5746 -2653 5903 121 9 0 chr5 22274370 22275237 -177354913 + HERV9 LTR ERV1 7525 8399 0 266 211 0 0 chr5 22275237 22275289 -177354861 + LTR30 LTR ERV1 1 52 -670 850 149 187 154 chr5 22275289 22275747 -177354403 + LTR12 LTR ERV1 55 480 -234 1976 171 6 9 chr5 22275755 22276099 -177354051 + MER21A LTR ERV1 589 931 0 232 299 100 53 chr5 22276212 22276513 -177353637 - L1M4 LINE L1 -1979 4167 3853 1304 92 31 0 chr5 22276557 22276753 -177353397 - HERV9 LTR ERV1 -26 8373 8172 431 300 68 34 chr5 22276753 22276990 -177353160 + L1M4 LINE L1 16 260 -6282 2336 97 0 3 chr5 22276996 22277307 -177352843 + AluSx SINE Alu 3 312 0 845 111 0 0 chr5 22277725 22277842 -177352308 - AluY SINE Alu -43 268 152 365 256 16 16 chr5 22278698 22278819 -177351331 - Looper DNA T2_type -8 1550 1430 1103 233 17 10 chr5 22278837 22279125 -177351025 - Looper DNA T2_type -598 960 671 23 54 0 0 chr5 22279125 22279162 -177350988 + AT_rich Low_complexity Low_complexity 1 37 0 556 292 78 10 chr5 22279176 22279368 -177350782 - MER3 DNA MER1_type 0 209 5 648 248 31 0 chr5 22279376 22279537 -177350613 - Looper DNA T2_type -893 665 500 221 176 0 59 chr5 22279799 22279867 -177350283 + GA-rich Low_complexity Low_complexity 1 64 0 413 133 36 24 chr5 22279993 22280076 -177350074 - MLT1D LTR MaLR 0 505 422 2150 238 72 65 chr5 22280076 22280430 -177349720 - L1MCb LINE L1 -4881 1026 676 1856 154 24 0 chr5 22280430 22280723 -177349427 + AluSx SINE Alu 1 300 -12 2150 238 72 65 chr5 22280723 22281140 -177349010 - L1MCb LINE L1 -5231 676 264 2099 111 0 0 chr5 22281140 22281456 -177348694 - AluSc SINE Alu 0 316 1 2150 238 72 65 chr5 22281456 22281711 -177348439 - L1MCb LINE L1 -5643 264 12 228 67 0 0 chr5 22281711 22281741 -177348409 + (TA)n Simple_repeat Simple_repeat 1 30 0 228 35 0 0 chr5 22281742 22281771 -177348379 + (GA)n Simple_repeat Simple_repeat 2 30 0 2150 238 72 65 chr5 22281771 22282078 -177348072 - L1MCb LINE L1 -5575 332 29 5755 40 0 19 chr5 22282903 22283637 -177346513 - L1PA3 LINE L1 -3 6152 5433 28 61 0 0 chr5 22284311 22284360 -177345790 + AT_rich Low_complexity Low_complexity 1 49 0 228 94 0 0 chr5 22284560 22284592 -177345558 + U3 snRNA snRNA 1 32 -185 23 68 0 0 chr5 22284618 22284662 -177345488 + AT_rich Low_complexity Low_complexity 1 44 0 451 221 0 16 chr5 22285089 22285211 -177344939 - MER53 DNA DNA 0 189 70 453 222 0 17 chr5 22285247 22285364 -177344786 - MER53 DNA DNA -74 115 1 545 333 75 4 chr5 22285370 22285598 -177344552 + MLT2E LTR ERVL 18 261 -367 417 284 38 49 chr5 22285619 22285802 -177344348 + MLT2E LTR ERVL 386 566 -62 2398 305 50 47 chr5 22286097 22287384 -177342766 + ERVL-E LTR ERVL 4448 5739 -25 243 273 91 11 chr5 22287386 22287474 -177342676 + MLT2E LTR ERVL 11 105 -523 1459 294 83 37 chr5 22287673 22287920 -177342230 + MLT1E LTR MaLR 1 235 -358 2340 185 12 26 chr5 22287920 22288413 -177341737 + MER66B LTR ERV1 1 486 0 1459 294 83 37 chr5 22288413 22288732 -177341418 + MLT1E LTR MaLR 235 593 0 251 236 0 0 chr5 22288732 22288785 -177341365 + MLT2E LTR ERVL 576 628 0 21 0 0 0 chr5 22289109 22289130 -177341020 + AT_rich Low_complexity Low_complexity 1 21 0 246 341 8 32 chr5 22289167 22289290 -177340860 + MER5A DNA MER1_type 38 157 -32 28 0 0 0 chr5 22289737 22289765 -177340385 + AT_rich Low_complexity Low_complexity 1 28 0 255 93 0 0 chr5 22290239 22290282 -177339868 + (TTAG)n Simple_repeat Simple_repeat 2 44 0 1925 130 7 0 chr5 22290282 22290567 -177339583 - AluSx SINE Alu -25 287 1 41 36 0 0 chr5 22291213 22291268 -177338882 + AT_rich Low_complexity Low_complexity 1 55 0 2198 48 7 0 chr5 22291286 22291556 -177338594 - AluY SINE Alu -11 300 29 23 86 0 0 chr5 22291797 22291855 -177338295 + AT_rich Low_complexity Low_complexity 1 58 0 338 214 20 0 chr5 22292325 22292423 -177337727 + (TATG)n Simple_repeat Simple_repeat 4 103 0 212 184 0 0 chr5 22292456 22292494 -177337656 + (TA)n Simple_repeat Simple_repeat 2 39 0 181 353 59 34 chr5 22292707 22292826 -177337324 - L2 LINE L2 -464 2850 2729 23 0 0 0 chr5 22293601 22293624 -177336526 + AT_rich Low_complexity Low_complexity 1 23 0 3879 178 32 11 chr5 22293916 22294735 -177335415 - L1MA8 LINE L1 -3 6288 5453 279 130 0 19 chr5 22294735 22294817 -177335333 + Alu SINE Alu 226 306 0 473 178 14 55 chr5 22294820 22294966 -177335184 - L1MCb LINE L1 -4965 1080 941 431 276 16 8 chr5 22294962 22295085 -177335065 - L1MCb LINE L1 -6267 297 174 * 25 31 0 0 chr5 22295112 22295144 -177335006 + AT_rich Low_complexity Low_complexity 1 32 0 713 279 82 34 chr5 22295261 22295737 -177334413 - L1ME3A LINE L1 -5 6165 5667 340 222 12 0 chr5 22296067 22296148 -177334002 - L1MB4 LINE L1 0 6180 6099 2473 178 28 0 chr5 22296156 22296623 -177333527 - L1MB4 LINE L1 -524 5809 5330 1261 234 39 28 chr5 22296618 22297007 -177333143 + L1M4 LINE L1 4687 5079 -1067 * 333 316 128 45 chr5 22298284 22298572 -177331578 - HAL1 LINE L1 -1386 1121 810 215 308 19 10 chr5 22299512 22299616 -177330534 - MIR SINE MIR -14 248 144 288 170 0 0 chr5 22300418 22300471 -177329679 + (TA)n Simple_repeat Simple_repeat 1 53 0 579 275 47 65 chr5 22300536 22301042 -177329108 + HAL1 LINE L1 828 1324 -1183 279 0 0 0 chr5 22301098 22301129 -177329021 + (CA)n Simple_repeat Simple_repeat 2 32 0 1532 203 36 46 chr5 22301329 22301554 -177328596 - MLT1B LTR MaLR 0 390 169 2229 59 6 86 chr5 22301554 22301891 -177328259 - AluY SINE Alu -1 310 1 1532 203 36 46 chr5 22301891 22302054 -177328096 - MLT1B LTR MaLR -221 169 6 208 208 0 42 chr5 22302078 22302126 -177328024 + (TAAAG)n Simple_repeat Simple_repeat 2 47 0 794 231 71 130 chr5 22302169 22302606 -177327544 + MLT2B1 LTR ERVL 4 414 0 434 429 49 7 chr5 22302608 22303025 -177327125 - L2 LINE L2 -270 3043 2609 8533 220 16 9 chr5 22304123 22304249 -177325901 - L1PA15 LINE L1 -2 7601 7477 3328 88 5 0 chr5 22304249 22304691 -177325459 - MLT2A1 LTR ERVL 0 444 1 8533 220 16 9 chr5 22304691 22307446 -177322704 - L1PA15 LINE L1 -126 7477 4707 938 251 42 26 chr5 22307452 22307554 -177322596 - L1P LINE L1 -3788 3796 3697 2129 164 14 22 chr5 22307554 22307921 -177322229 + THE1B LTR MaLR 1 364 0 938 251 42 26 chr5 22307921 22308163 -177321987 - L1P LINE L1 -3887 3697 3447 1949 125 45 17 chr5 22308179 22308532 -177321618 - L1PA10 LINE L1 -13 6155 5793 4729 264 51 31 chr5 22311563 22311809 -177318341 - L1PA15 LINE L1 -3896 3688 3448 5767 110 19 4 chr5 22311809 22312819 -177317331 - L1PA10 LINE L1 -13 6155 5136 4729 264 51 31 chr5 22312819 22315149 -177315001 - L1PA15 LINE L1 -4136 3448 1070 1175 306 43 10 chr5 22315169 22315652 -177314498 - L1PA15 LINE L1 -7076 505 7 428 167 0 0 chr5 22315794 22315860 -177314290 + FLAM_A SINE Alu 2 67 -65 2181 110 3 7 chr5 22316384 22316683 -177313467 - AluSg SINE Alu -12 298 1 2340 161 31 10 chr5 22316884 22317300 -177312850 - MSTA LTR MaLR 0 428 4 28 0 0 0 chr5 22317418 22317446 -177312704 + AT_rich Low_complexity Low_complexity 1 28 0 677 258 53 27 chr5 22317643 22318110 -177312040 - L1ME LINE L1 -562 5602 5121 1817 91 91 31 chr5 22318593 22318913 -177311237 + HERVH LTR ERV1 7375 7713 0 1019 185 124 79 chr5 22318913 22319307 -177310843 + LTR7 LTR ERV1 1 412 -38 186 208 0 0 chr5 22319816 22319864 -177310286 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 261 284 106 80 chr5 22320184 22320459 -177309691 + LTR33 LTR ERVL 217 498 -23 305 237 10 72 chr5 22320554 22320651 -177309499 - L1MC4 LINE L1 -1337 6705 6615 218 191 0 16 chr5 22320662 22320725 -177309425 + (TA)n Simple_repeat Simple_repeat 1 62 0 21 0 0 0 chr5 22320995 22321016 -177309134 + AT_rich Low_complexity Low_complexity 1 21 0 41 66 0 0 chr5 22321105 22321181 -177308969 + AT_rich Low_complexity Low_complexity 1 76 0 2956 177 49 13 chr5 22321189 22321742 -177308408 - Tigger7 DNA MER2_type -159 574 2 1394 208 40 55 chr5 22321748 22322127 -177308023 - MER67D LTR ERV1 -140 374 2 1706 113 16 0 chr5 22322381 22322629 -177307521 + L1PB1 LINE L1 5540 5791 -360 311 149 75 9 chr5 22322629 22322736 -177307414 + (TA)n Simple_repeat Simple_repeat 1 114 0 2415 126 0 13 chr5 22322739 22323113 -177307037 + L1PB1 LINE L1 5782 6150 -1 1161 242 38 46 chr5 22323326 22323719 -177306431 - MLT1B LTR MaLR 0 390 1 1980 98 10 13 chr5 22324494 22324799 -177305351 - L1PA13 LINE L1 -208 5960 5657 1301 121 5 0 chr5 22324799 22324992 -177305158 + L1PA13 LINE L1 5957 6155 -8 574 208 29 87 chr5 22325695 22325801 -177304349 + MLT1A1 LTR MaLR 170 260 -105 2003 161 31 6 chr5 22325801 22326156 -177303994 + THE1B LTR MaLR 1 364 0 574 208 29 87 chr5 22326156 22326256 -177303894 + MLT1A1 LTR MaLR 260 364 -1 2478 51 0 0 chr5 22327680 22327974 -177302176 - AluY SINE Alu -17 294 1 2093 113 3 10 chr5 22328550 22328851 -177301299 + AluSx SINE Alu 1 299 -13 1506 153 80 0 chr5 22328870 22329132 -177301018 + AluJb SINE Alu 1 283 -29 2105 124 7 0 chr5 22329863 22330153 -177299997 - AluSg SINE Alu -18 292 1 21 57 0 0 chr5 22331197 22331232 -177298918 + AT_rich Low_complexity Low_complexity 1 35 0 1500 202 94 11 chr5 22331424 22331880 -177298270 + LTR54B LTR ERV1 1 494 -4 332 117 0 17 chr5 22332019 22332079 -177298071 + (TCC)n Simple_repeat Simple_repeat 3 61 0 5813 131 40 16 chr5 22332200 22333083 -177297067 + L1MA4A LINE L1 5166 6077 -226 527 92 0 0 chr5 22333083 22333159 -177296991 - MADE1 DNA Mariner -1 79 4 5813 131 40 16 chr5 22333159 22333389 -177296761 + L1MA4A LINE L1 6077 6300 -3 16616 169 64 33 chr5 22334396 22334793 -177295357 + L1MA1 LINE L1 16 399 -7166 250 125 0 0 chr5 22334793 22334833 -177295317 - MADE1 DNA Mariner -14 66 27 16616 169 64 33 chr5 22334833 22337725 -177292425 + L1MA1 LINE L1 399 3447 -4118 257 0 0 197 chr5 22337726 22337787 -177292363 - L1M1 LINE L1 -4466 3099 3051 * 5829 203 32 17 chr5 22337762 22339312 -177290838 - L1 LINE L1 -2497 5068 3478 1050 8 0 0 chr5 22339312 22339431 -177290719 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 5829 203 32 17 chr5 22339431 22339812 -177290338 - L1 LINE L1 -4087 3478 3104 * 6657 186 16 18 chr5 22339810 22341238 -177288912 + L1MA1 LINE L1 5160 6585 -980 3598 140 18 5 chr5 22341782 22342465 -177287685 + L1MA1 LINE L1 6576 7267 -454 763 58 19 0 chr5 22345010 22345114 -177285036 + L1PA7 LINE L1 6048 6153 -1 294 169 92 15 chr5 22347146 22347211 -177282939 + Tigger5 DNA MER2_type 10 79 -2244 * 1126 210 25 4 chr5 22347204 22347442 -177282708 + Tigger5 DNA MER2_type 2081 2323 0 253 309 25 0 chr5 22348459 22348540 -177281610 - L2 LINE L2 -4 3268 3186 300 352 27 32 chr5 22349130 22349349 -177280801 - L2 LINE L2 -1 3312 3095 203 378 26 39 chr5 22349328 22349484 -177280666 - L2 LINE L2 -836 2478 2325 * 969 131 0 0 chr5 22350454 22350591 -177279559 + FLAM_C SINE Alu 7 143 0 1158 180 5 14 chr5 22350592 22350803 -177279347 + AluJo SINE Alu 104 312 0 1900 158 48 0 chr5 22351159 22351489 -177278661 + MER7A DNA MER2_type 3 346 0 233 57 29 0 chr5 22351821 22351856 -177278294 + (TTA)n Simple_repeat Simple_repeat 1 36 0 1064 193 80 75 chr5 22352604 22352966 -177277184 + MLT1A1 LTR MaLR 1 364 -1 1654 260 87 49 chr5 22353011 22353691 -177276459 - L1M4 LINE L1 -1062 5084 4360 1333 214 32 21 chr5 22353691 22353976 -177276174 - AluJo SINE Alu -24 288 1 1654 260 87 49 chr5 22353976 22354191 -177275959 - L1M4 LINE L1 -1786 4360 4155 702 276 112 23 chr5 22354214 22354669 -177275481 - L1M4 LINE L1 -2606 3540 3010 2008 136 7 0 chr5 22354669 22354971 -177275179 - AluSc SINE Alu -5 304 1 702 276 112 23 chr5 22354971 22355157 -177274993 - L1M4 LINE L1 -3136 3010 2842 261 249 110 29 chr5 22355257 22355430 -177274720 + L1ME1 LINE L1 1412 1598 -4942 1059 242 68 42 chr5 22355432 22355799 -177274351 + L1ME1 LINE L1 5769 6153 -407 2404 65 3 0 chr5 22355799 22356106 -177274044 + AluY SINE Alu 1 308 -3 1059 242 68 42 chr5 22356106 22356232 -177273918 + L1ME1 LINE L1 6153 6274 -286 354 107 0 0 chr5 22356530 22356586 -177273564 + (TG)n Simple_repeat Simple_repeat 1 56 0 278 245 0 11 chr5 22356598 22356692 -177273458 + CT-rich Low_complexity Low_complexity 4 96 0 932 234 0 5 chr5 22360918 22361132 -177269018 + L1MB5 LINE L1 5950 6162 -12 197 350 98 16 chr5 22361259 22361382 -177268768 + L2 LINE L2 3140 3272 0 213 289 0 0 chr5 22361733 22361785 -177268365 + (TATG)n Simple_repeat Simple_repeat 4 55 0 570 318 53 0 chr5 22361900 22362089 -177268061 + MIR SINE MIR 18 216 -46 225 65 0 0 chr5 22363619 22363650 -177266500 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 275 250 65 82 chr5 22364048 22364094 -177266056 + L1MC5 LINE L1 7122 7167 -794 1890 145 3 38 chr5 22364094 22364412 -177265738 - AluSq SINE Alu -6 307 1 275 250 65 82 chr5 22364412 22364549 -177265601 + L1MC5 LINE L1 7167 7302 -659 918 252 129 90 chr5 22364610 22365067 -177265083 + MLT1C-int LTR MaLR 876 1350 -21 659 251 81 14 chr5 22365122 22365392 -177264758 + MLT1C LTR MaLR 64 415 -52 250 158 0 0 chr5 22365684 22365722 -177264428 + MLT1C LTR MaLR 427 464 -3 267 327 38 25 chr5 22365887 22366046 -177264104 - MIR SINE MIR -49 213 53 1188 222 177 11 chr5 22366268 22366629 -177263521 + MLT1C LTR MaLR 1 421 -46 2113 115 10 22 chr5 22366968 22367282 -177262868 - AluSq SINE Alu -3 310 1 192 364 18 45 chr5 22367780 22367890 -177262260 - L2 LINE L2 -21 3292 3186 557 336 36 40 chr5 22368284 22368558 -177261592 + HERVL40 LTR ERVL 5254 5526 -4 1544 174 4 8 chr5 22368889 22369154 -177260996 - AluJo SINE Alu -48 264 1 299 213 33 0 chr5 22369170 22369231 -177260919 - HERVL40 LTR ERVL -5450 80 18 960 284 29 75 chr5 22369245 22369727 -177260423 - LTR40a LTR ERVL -2 460 1 2031 368 74 43 chr5 22369729 22371529 -177258621 - HERVL40 LTR ERVL -2094 2902 1048 2521 325 176 29 chr5 22373364 22374511 -177255639 + L2 LINE L2 460 1437 -1877 1981 146 3 0 chr5 22374511 22374812 -177255338 + AluSx SINE Alu 1 302 -10 2521 325 176 29 chr5 22374812 22375648 -177254502 + L2 LINE L2 1437 2734 -580 196 186 23 0 chr5 22375876 22375919 -177254231 + L2 LINE L2 3258 3301 -12 21 57 0 0 chr5 22376500 22376535 -177253615 + AT_rich Low_complexity Low_complexity 1 35 0 675 231 35 35 chr5 22376621 22376820 -177253330 + MER3 DNA MER1_type 10 208 -1 1334 200 79 24 chr5 22377558 22377888 -177252262 + MLT1A1 LTR MaLR 1 348 -17 2092 120 90 0 chr5 22377889 22378223 -177251927 - THE1B LTR MaLR 0 364 1 9229 122 34 47 chr5 22378223 22379825 -177250325 - THE1B-int LTR MaLR 0 1580 1 1989 148 77 3 chr5 22379825 22380164 -177249986 - THE1B LTR MaLR 0 364 1 225 321 0 0 chr5 22381401 22381457 -177248693 + MIR3 SINE MIR 149 204 -4 1591 184 54 64 chr5 22384359 22384751 -177245399 + MLT1B LTR MaLR 1 388 -2 26 0 0 0 chr5 22384827 22384853 -177245297 + AT_rich Low_complexity Low_complexity 1 26 0 227 286 39 0 chr5 22384982 22385059 -177245091 - L1M4 LINE L1 -1998 4148 4069 27 73 0 0 chr5 22385154 22385209 -177244941 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 22385652 22385673 -177244477 + AT_rich Low_complexity Low_complexity 1 21 0 201 108 0 0 chr5 22386002 22386039 -177244111 + (TG)n Simple_repeat Simple_repeat 1 37 0 22 56 0 0 chr5 22386469 22386505 -177243645 + AT_rich Low_complexity Low_complexity 1 36 0 1714 123 43 4 chr5 22386651 22386927 -177243223 - L1PA10 LINE L1 -9 6159 5873 24 0 0 0 chr5 22387765 22387789 -177242361 + AT_rich Low_complexity Low_complexity 1 24 0 216 331 48 30 chr5 22388077 22388243 -177241907 + L2 LINE L2 1936 2104 -1210 23 0 0 0 chr5 22389368 22389391 -177240759 + AT_rich Low_complexity Low_complexity 1 23 0 180 111 0 0 chr5 22390279 22390306 -177239844 + (CA)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr5 22390350 22390376 -177239774 + AT_rich Low_complexity Low_complexity 1 26 0 1897 112 114 97 chr5 22390511 22390932 -177239218 + MSTA LTR MaLR 1 428 0 35 63 0 0 chr5 22391452 22391515 -177238635 + AT_rich Low_complexity Low_complexity 1 63 0 26 0 0 0 chr5 22392285 22392311 -177237839 + AT_rich Low_complexity Low_complexity 1 26 0 196 225 0 0 chr5 22393903 22393943 -177236207 - MIR3 SINE MIR -17 191 152 396 291 93 7 chr5 22393997 22394148 -177236002 - MER58A DNA MER1_type 0 164 1 189 107 0 0 chr5 22394358 22394386 -177235764 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 234 0 0 0 chr5 22394386 22394412 -177235738 + (T)n Simple_repeat Simple_repeat 1 26 0 604 114 0 0 chr5 22394442 22394530 -177235620 + AluS SINE Alu 1 88 -225 1317 113 5 10 chr5 22394630 22394834 -177235316 - AluSg SINE Alu -107 203 1 453 331 84 0 chr5 22395942 22396241 -177233909 + L1ME3A LINE L1 4959 5282 -864 684 303 108 32 chr5 22396349 22396841 -177233309 + L1ME3A LINE L1 5440 5968 -202 21 0 0 0 chr5 22397039 22397060 -177233090 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr5 22397278 22397308 -177232842 + AT_rich Low_complexity Low_complexity 1 30 0 689 310 91 60 chr5 22397369 22398010 -177232140 - L2 LINE L2 -15 3298 2603 759 331 92 28 chr5 22398010 22398551 -177231599 - L2 LINE L2 -981 2333 1758 1525 120 178 0 chr5 22398675 22398999 -177231151 + AluSq SINE Alu 1 367 0 687 256 0 0 chr5 22399181 22399341 -177230809 - L1PA16 LINE L1 -7 6159 6000 1027 322 88 23 chr5 22399382 22399997 -177230153 - L2 LINE L2 -1786 1528 874 225 294 29 49 chr5 22401673 22401775 -177228375 + MIR SINE MIR 41 140 -68 180 0 0 0 chr5 22401814 22401834 -177228316 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 27 29 0 0 chr5 22402190 22402224 -177227926 + AT_rich Low_complexity Low_complexity 1 34 0 1799 72 19 26 chr5 22402227 22402491 -177227659 - L1PB1 LINE L1 -9 6142 5881 1958 131 17 0 chr5 22402491 22402781 -177227369 - AluSx SINE Alu -17 295 1 2172 104 13 3 chr5 22403373 22403671 -177226479 - AluSq SINE Alu -12 301 1 191 267 109 103 chr5 22404262 22404427 -177225723 + MIR3 SINE MIR 18 183 -25 2100 125 0 0 chr5 22404490 22404778 -177225372 - AluSx SINE Alu -24 288 1 243 274 10 69 chr5 22404810 22404912 -177225238 + MER58C DNA MER1_type 120 215 0 1644 229 20 0 chr5 22406051 22406409 -177223741 - MLT1A1 LTR MaLR 0 365 1 2281 139 5 83 chr5 22407027 22407473 -177222677 + MLT2D LTR ERVL 1 411 -3 2306 89 0 0 chr5 22407597 22407890 -177222260 + AluY SINE Alu 1 293 -18 2124 221 16 0 chr5 22408634 22409083 -177221067 + MER74C LTR ERVL 5 460 0 393 346 60 41 chr5 22409594 22410007 -177220143 + L1ME1 LINE L1 26 446 -5624 467 286 62 50 chr5 22410056 22410814 -177219336 + L1ME1 LINE L1 525 1272 -4808 207 0 0 0 chr5 22410814 22410837 -177219313 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 467 286 62 50 chr5 22410837 22411072 -177219078 + L1ME1 LINE L1 1272 1503 -4577 669 252 87 0 chr5 22411081 22411323 -177218827 + L1ME1 LINE L1 4715 4977 -1103 1957 264 67 18 chr5 22411325 22412263 -177217887 + L1ME1 LINE L1 5022 6012 -88 309 309 70 30 chr5 22412417 22412647 -177217503 + L1ME LINE L1 2960 3198 -2882 485 228 16 0 chr5 22413714 22413841 -177216309 - L1MB4 LINE L1 0 6180 6052 21 0 0 0 chr5 22414249 22414270 -177215880 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 22414578 22414607 -177215543 + AT_rich Low_complexity Low_complexity 1 29 0 2065 115 7 0 chr5 22414766 22415049 -177215101 + AluSx SINE Alu 1 286 -22 620 62 21 0 chr5 22415049 22415146 -177215004 + (TATAA)n Simple_repeat Simple_repeat 4 102 0 228 222 0 19 chr5 22415334 22415388 -177214762 - LTR33A LTR ERVL -20 503 451 229 359 26 34 chr5 22415615 22415732 -177214418 - MLT2E LTR ERVL -481 147 32 217 222 0 0 chr5 22416634 22416679 -177213471 + (TG)n Simple_repeat Simple_repeat 2 46 0 217 222 0 0 chr5 22417713 22417758 -177212392 + (TG)n Simple_repeat Simple_repeat 2 46 0 255 240 62 47 chr5 22418136 22418265 -177211885 - LTR16A LTR ERVL -18 432 302 2439 206 42 4 chr5 22418334 22418815 -177211335 + MER68 LTR ERV1 55 553 -9 1797 141 10 33 chr5 22418979 22419283 -177210867 + AluSq SINE Alu 1 297 -16 352 361 73 55 chr5 22419813 22419947 -177210203 - HERV16 LTR ERVL -765 4999 4869 2259 88 0 3 chr5 22419947 22420243 -177209907 + AluY SINE Alu 1 295 -16 352 361 73 55 chr5 22420243 22420584 -177209566 - HERV16 LTR ERVL -895 4869 4504 2038 127 0 25 chr5 22420584 22420900 -177209250 + AluSg SINE Alu 1 308 -2 352 361 73 55 chr5 22420900 22421145 -177209005 - HERV16 LTR ERVL -1260 4504 4265 413 328 34 21 chr5 22421330 22421565 -177208585 - HERV16 LTR ERVL -1672 3982 3745 298 341 90 0 chr5 22421790 22422132 -177208018 - HERV16 LTR ERVL -2333 3321 2938 789 213 87 43 chr5 22422561 22422768 -177207382 + MER20 DNA MER1_type 1 216 -3 263 297 20 20 chr5 22422820 22422921 -177207229 - HERV16 LTR ERVL -4440 556 456 245 284 37 37 chr5 22423222 22423331 -177206819 - LTR16A1 LTR ERVL -348 109 1 28 0 0 0 chr5 22423423 22423451 -177206699 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 22423881 22423905 -177206245 + AT_rich Low_complexity Low_complexity 1 24 0 547 143 58 209 chr5 22424483 22424741 -177205409 + MER20 DNA MER1_type 1 219 0 22 35 0 0 chr5 22425025 22425054 -177205096 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr5 22425872 22425899 -177204251 + AT_rich Low_complexity Low_complexity 1 27 0 252 220 34 0 chr5 22426141 22426200 -177203950 + MLT1L LTR MaLR 549 609 -6 339 318 109 25 chr5 22427093 22427376 -177202774 - HERV16 LTR ERVL -2154 3331 3025 2229 112 49 27 chr5 22427378 22427745 -177202405 - THE1C LTR MaLR 0 375 1 911 360 72 26 chr5 22427796 22428383 -177201767 + L3 LINE CR1 521 1134 -443 27 29 0 0 chr5 22428410 22428444 -177201706 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr5 22428566 22428594 -177201556 + AT_rich Low_complexity Low_complexity 1 28 0 638 328 26 15 chr5 22428617 22428888 -177201262 - LTR16B LTR ERVL 0 464 191 2126 112 3 16 chr5 22428909 22429212 -177200938 + AluSg SINE Alu 2 300 -10 228 418 29 22 chr5 22429549 22429822 -177200328 - LTR16B LTR ERVL -144 320 46 23 0 0 0 chr5 22430425 22430448 -177199702 + AT_rich Low_complexity Low_complexity 1 23 0 580 319 120 3 chr5 22430556 22430857 -177199293 - HERV16 LTR ERVL -1064 4700 4365 709 347 43 27 chr5 22431924 22432310 -177197840 - HERV16 LTR ERVL -1910 3086 2736 2204 181 124 46 chr5 22432311 22432913 -177197237 - LTR48B LTR ERV1 0 787 4 964 302 66 67 chr5 22433033 22433821 -177196329 - HERV16 LTR ERVL -2613 2383 1597 706 313 80 39 chr5 22433942 22434332 -177195818 - HERV16 LTR ERVL -3608 1388 983 546 303 70 95 chr5 22434355 22434740 -177195410 - MER77 LTR ERV1 -27 578 336 2538 46 20 0 chr5 22434740 22435045 -177195105 - AluY SINE Alu 0 311 1 546 303 70 95 chr5 22435045 22435322 -177194828 - MER77 LTR ERV1 -269 336 54 1841 70 12 0 chr5 22435751 22435994 -177194156 + L1PA7 LINE L1 5908 6153 -1 1198 172 19 94 chr5 22436149 22436468 -177193682 - AluJb SINE Alu -7 295 1 1532 184 35 49 chr5 22436577 22436925 -177193225 - MER7A DNA MER2_type -4 342 2 484 316 92 10 chr5 22436974 22437170 -177192980 + MIR SINE MIR 21 232 -30 302 260 87 31 chr5 22438128 22438255 -177191895 + L1MCa LINE L1 66 199 -6227 208 320 10 10 chr5 22438696 22438799 -177191351 + (TATG)n Simple_repeat Simple_repeat 2 104 0 247 256 11 22 chr5 22439119 22439209 -177190941 - L1ME LINE L1 -536 5585 5497 23 0 0 0 chr5 22439585 22439608 -177190542 + AT_rich Low_complexity Low_complexity 1 23 0 220 197 92 53 chr5 22440233 22440309 -177189841 - MIR3 SINE MIR -22 186 108 2115 126 3 0 chr5 22440349 22440643 -177189507 + AluSx SINE Alu 3 297 -15 189 74 0 0 chr5 22440978 22441005 -177189145 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2635 107 0 10 chr5 22441348 22441740 -177188410 + L1PA13 LINE L1 5772 6159 -4 1634 227 76 56 chr5 22443375 22443873 -177186277 - MLT2B1 LTR ERVL -8 512 5 4069 185 37 13 chr5 22443903 22444683 -177185467 - ERVL-B1 LTR ERVL -242 5522 4724 267 269 0 15 chr5 22444687 22444754 -177185396 - MER2 DNA MER2_type 0 345 280 1071 225 5 0 chr5 22444792 22445001 -177185149 - MER2 DNA MER2_type -135 210 1 4228 228 50 21 chr5 22445019 22445530 -177184620 - HERV16 LTR ERVL -3466 2298 1804 189 0 0 0 chr5 22445530 22445551 -177184599 + (TC)n Simple_repeat Simple_repeat 2 22 0 4228 228 50 21 chr5 22445551 22446141 -177184009 - HERV16 LTR ERVL -3960 1804 1128 1515 124 128 22 chr5 22446141 22446415 -177183735 - L1P4 LINE L1 -437 5729 5427 2246 142 8 13 chr5 22446415 22446795 -177183355 + L1PA16 LINE L1 5787 6164 -2 720 146 8 0 chr5 22446805 22446928 -177183222 - HERV16 LTR ERVL -4627 1137 1014 * 2484 253 43 30 chr5 22446927 22447595 -177182555 - HERV16 LTR ERVL -4877 887 211 1014 214 60 0 chr5 22447596 22447635 -177182515 + AluSg/x SINE Alu 82 117 -193 243 0 0 0 chr5 22447635 22447662 -177182488 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1014 214 60 0 chr5 22447662 22447823 -177182327 + AluSg/x SINE Alu 117 294 -16 920 325 64 9 chr5 22448445 22448869 -177181281 + LTR16A LTR ERVL 1 447 -3 240 226 16 0 chr5 22448874 22448936 -177181214 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 312 321 76 8 chr5 22449053 22449184 -177180966 + MIR SINE MIR 53 192 -70 11435 210 47 32 chr5 22449211 22452885 -177177265 + L1MA4A LINE L1 1 3616 -3749 1703 177 0 3 chr5 22452885 22453167 -177176983 + AluJo SINE Alu 7 287 -25 224 29 0 29 chr5 22453170 22453204 -177176946 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 11435 210 47 32 chr5 22453204 22456505 -177173645 + L1MA4A LINE L1 3617 7361 -4 29 28 0 0 chr5 22458088 22458124 -177172026 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 22458164 22458186 -177171964 + AT_rich Low_complexity Low_complexity 1 22 0 676 295 24 9 chr5 22458186 22458396 -177171754 - MER20 DNA MER1_type 0 219 7 29 47 0 0 chr5 22458428 22458471 -177171679 + AT_rich Low_complexity Low_complexity 1 43 0 320 322 60 0 chr5 22458694 22458877 -177171273 - L1M4 LINE L1 -3156 2990 2797 26 30 0 0 chr5 22458877 22458910 -177171240 + AT_rich Low_complexity Low_complexity 1 33 0 327 278 142 13 chr5 22458929 22459231 -177170919 - L1M4 LINE L1 -3614 2532 2192 328 158 12 12 chr5 22459264 22459346 -177170804 + (TA)n Simple_repeat Simple_repeat 1 82 0 25 0 0 0 chr5 22459634 22459659 -177170491 + AT_rich Low_complexity Low_complexity 1 25 0 2681 226 46 8 chr5 22459864 22460493 -177169657 + MLT-int LTR MaLR 5 657 -1078 299 169 31 31 chr5 22460636 22460701 -177169449 + MLT-int LTR MaLR 677 741 -994 890 162 94 26 chr5 22460729 22460920 -177169230 - MSTA LTR MaLR -131 297 94 21 0 0 0 chr5 22461113 22461134 -177169016 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr5 22461613 22461646 -177168504 + AT_rich Low_complexity Low_complexity 1 33 0 1308 164 4 0 chr5 22462273 22462511 -177167639 + L1PA14 LINE L1 5923 6161 0 892 252 39 25 chr5 22463629 22463915 -177166235 - MLT1A1 LTR MaLR -75 290 1 1266 205 48 44 chr5 22464334 22464627 -177165523 + MLT2B1 LTR ERVL 1 294 -226 350 323 0 0 chr5 22465312 22465408 -177164742 + L2 LINE L2 3217 3312 -1 201 365 8 0 chr5 22465498 22465587 -177164563 - MIR SINE MIR -61 147 89 3444 125 2 4 chr5 22466789 22467293 -177162857 - MER9 LTR ERVK -8 503 1 3025 166 59 16 chr5 22467792 22468432 -177161718 - MER41-int LTR ERV1 -3922 3894 3227 * 3221 143 18 31 chr5 22468425 22468971 -177161179 - MER41-int LTR ERV1 -5351 595 57 872 193 28 0 chr5 22471669 22471845 -177158305 - L1PBa LINE L1 -6682 181 1 32 67 0 0 chr5 22472537 22472597 -177157553 + AT_rich Low_complexity Low_complexity 1 60 0 21 36 0 0 chr5 22472844 22472872 -177157278 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 22473481 22473510 -177156640 + AT_rich Low_complexity Low_complexity 1 29 0 304 242 0 0 chr5 22475026 22475092 -177155058 + MLT1F1 LTR MaLR 59 124 -443 2230 209 45 25 chr5 22475099 22475658 -177154492 + L1MC3 LINE L1 7196 7765 -20 196 197 16 16 chr5 22477563 22477624 -177152526 + (TATATG)n Simple_repeat Simple_repeat 5 65 0 1816 128 51 65 chr5 22477629 22477982 -177152168 + THE1C LTR MaLR 28 375 0 354 123 0 0 chr5 22477984 22478041 -177152109 + (TA)n Simple_repeat Simple_repeat 2 58 0 617 327 73 20 chr5 22478449 22478697 -177151453 + LTR16C LTR ERVL 171 431 -60 274 354 9 9 chr5 22479067 22479180 -177150970 + MLT2E LTR ERVL 47 159 -469 1458 72 25 130 chr5 22479636 22479912 -177150238 + AluYb8 SINE Alu 61 307 -11 2237 177 24 5 chr5 22479937 22480361 -177149789 + MSTB1 LTR MaLR 1 432 0 2840 220 69 3 chr5 22480361 22481012 -177149138 + MSTB1-int LTR MaLR 1 694 -957 308 265 41 10 chr5 22481113 22481211 -177148939 + L1MC2 LINE L1 6229 6329 -15 204 179 0 0 chr5 22481223 22481262 -177148888 + A-rich Low_complexity Low_complexity 1 39 0 290 326 35 47 chr5 22481477 22481649 -177148501 + L1MCc LINE L1 259 428 -5995 856 76 0 8 chr5 22481741 22481859 -177148291 - AluSp/q SINE Alu -9 304 188 216 0 0 0 chr5 22481952 22481976 -177148174 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 291 337 0 0 chr5 22482038 22482124 -177148026 + L1MCc LINE L1 824 909 -5514 1130 255 85 46 chr5 22482969 22483428 -177146722 - MLT1D LTR MaLR -3 502 26 261 57 0 0 chr5 22484446 22484481 -177145669 + (A)n Simple_repeat Simple_repeat 1 35 0 1022 183 0 7 chr5 22484481 22484673 -177145477 - MER66-int LTR ERV1 -4503 2173 1733 1165 237 40 23 chr5 22484679 22485044 -177145106 - MER66A LTR ERV1 -19 459 169 1958 144 26 7 chr5 22485131 22485437 -177144713 - AluSx SINE Alu 0 312 1 326 197 26 0 chr5 22485490 22485566 -177144584 + MER67D LTR ERV1 432 509 -5 23 0 0 0 chr5 22486229 22486252 -177143898 + AT_rich Low_complexity Low_complexity 1 23 0 741 267 169 73 chr5 22486897 22487102 -177143048 + MLT1E1 LTR MaLR 19 203 -451 1292 238 3 10 chr5 22487102 22487401 -177142749 + AluJb SINE Alu 1 297 -15 741 267 169 73 chr5 22487401 22487674 -177142476 + MLT1E1 LTR MaLR 203 543 -111 264 167 0 0 chr5 22489151 22489193 -177140957 + MLT1A1 LTR MaLR 5 46 -328 234 0 0 0 chr5 22489251 22489277 -177140873 + (ATG)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr5 22489277 22489301 -177140849 + (TTA)n Simple_repeat Simple_repeat 3 26 0 3116 31 0 3 chr5 22489309 22489693 -177140457 + L1P LINE L1 3635 4017 -2129 388 165 35 0 chr5 22489681 22489766 -177140384 - L1MA3 LINE L1 -179 6126 6039 * 1060 149 0 0 chr5 22489766 22489941 -177140209 + L1MA3 LINE L1 6125 6305 0 1268 264 32 5 chr5 22489942 22490257 -177139893 + MLT1A1 LTR MaLR 37 361 -4 21 36 0 0 chr5 22490762 22490790 -177139360 + AT_rich Low_complexity Low_complexity 1 28 0 24 77 0 0 chr5 22491611 22491663 -177138487 + AT_rich Low_complexity Low_complexity 1 52 0 37 52 0 0 chr5 22491709 22491767 -177138383 + AT_rich Low_complexity Low_complexity 1 58 0 667 219 0 0 chr5 22491819 22491956 -177138194 - MSTC LTR MaLR 0 428 292 1698 94 0 55 chr5 22492482 22492736 -177137414 - AluSg SINE Alu -21 289 50 299 160 42 34 chr5 22494695 22494814 -177135336 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 353 57 95 25 chr5 22494817 22494833 -177135317 + (TA)n Simple_repeat Simple_repeat 2 15 -155 2644 41 0 0 chr5 22494833 22495150 -177135000 - AluYb8 SINE Alu -1 317 1 353 57 95 25 chr5 22495150 22495291 -177134859 + (TA)n Simple_repeat Simple_repeat 15 170 0 25 31 0 0 chr5 22495329 22495361 -177134789 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 22495555 22495577 -177134573 + AT_rich Low_complexity Low_complexity 1 22 0 615 260 86 32 chr5 22496461 22496855 -177133295 - MSTD LTR MaLR 0 396 3 200 250 0 0 chr5 22496934 22496974 -177133176 + MER5A DNA MER1_type 10 49 -140 22 0 0 0 chr5 22497873 22497895 -177132255 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 22498097 22498118 -177132032 + AT_rich Low_complexity Low_complexity 1 21 0 328 294 110 48 chr5 22498722 22498868 -177131282 - L2 LINE L2 -1 3271 3117 339 192 222 20 chr5 22499303 22499402 -177130748 - L2 LINE L2 -5 3308 3190 1767 111 0 4 chr5 22500270 22500531 -177129619 + L1PB1 LINE L1 5892 6151 0 21 0 0 0 chr5 22501199 22501220 -177128930 + AT_rich Low_complexity Low_complexity 1 21 0 224 328 0 30 chr5 22501246 22501313 -177128837 + L2 LINE L2 3234 3298 -15 337 279 79 63 chr5 22501551 22501805 -177128345 - L1MC/D LINE L1 -2294 5514 5257 351 0 0 0 chr5 22503284 22503323 -177126827 + (TG)n Simple_repeat Simple_repeat 1 39 0 309 26 0 0 chr5 22503322 22503360 -177126790 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 1997 147 0 0 chr5 22503995 22504281 -177125869 + AluSx SINE Alu 1 286 -26 25 0 0 0 chr5 22505405 22505430 -177124720 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr5 22507994 22508023 -177122127 + AT_rich Low_complexity Low_complexity 1 29 0 31 26 0 0 chr5 22508078 22508116 -177122034 + AT_rich Low_complexity Low_complexity 1 38 0 1160 66 0 6 chr5 22509315 22509481 -177120669 - L1P LINE L1 -745 5427 5263 210 171 0 0 chr5 22510024 22510059 -177120091 + (TA)n Simple_repeat Simple_repeat 2 36 0 2318 85 0 16 chr5 22510081 22510388 -177119762 - AluSx SINE Alu -10 302 1 600 277 36 43 chr5 22510762 22511015 -177119135 + MER4B-int LTR ERV1 4101 4351 -2407 1597 235 27 10 chr5 22511168 22511576 -177118574 - MLT1C-int LTR MaLR -938 433 19 1062 240 146 21 chr5 22511581 22511965 -177118185 - MLT1C LTR MaLR -30 437 6 1533 216 62 10 chr5 22513488 22513904 -177116246 + L1MC4a LINE L1 7181 7618 -190 230 304 83 0 chr5 22513960 22514128 -177116022 + L1MC4a LINE L1 7627 7808 0 300 120 0 0 chr5 22514409 22514459 -177115691 + (TG)n Simple_repeat Simple_repeat 2 51 0 289 247 17 15 chr5 22514459 22514581 -177115569 + L1MC4 LINE L1 7701 8042 0 2400 186 14 10 chr5 22515028 22515851 -177114299 - L1PA16 LINE L1 -540 5626 4806 1078 197 14 14 chr5 22515854 22516067 -177114083 + L1PA16 LINE L1 5647 5859 -307 771 90 23 45 chr5 22516070 22516203 -177113947 + L1PA16 LINE L1 6037 6166 0 21 0 0 0 chr5 22516664 22516685 -177113465 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 22517337 22517360 -177112790 + AT_rich Low_complexity Low_complexity 1 23 0 956 128 14 0 chr5 22517366 22517514 -177112636 - AluSc SINE Alu -4 305 156 408 145 41 0 chr5 22517536 22517620 -177112530 + L1P4 LINE L1 5452 5547 -618 189 0 0 0 chr5 22518480 22518501 -177111649 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2262 69 0 3 chr5 22518508 22518797 -177111353 - AluY SINE Alu -23 288 1 1652 275 69 36 chr5 22519334 22519669 -177110481 - MLT1E2 LTR MaLR 0 626 263 2311 58 0 67 chr5 22519669 22519997 -177110153 - AluY SINE Alu -4 307 2 1652 275 69 36 chr5 22519997 22520243 -177109907 - MLT1E2 LTR MaLR -363 263 26 1856 234 53 40 chr5 22520620 22520995 -177109155 - LTR53 LTR ERVL 0 519 134 2081 108 24 0 chr5 22520995 22521292 -177108858 + AluSq SINE Alu 1 304 -9 1856 234 53 40 chr5 22521292 22521421 -177108729 - LTR53 LTR ERVL -385 134 8 324 65 0 0 chr5 22521482 22521528 -177108622 + MADE1 DNA Mariner 1 46 -34 294 408 26 64 chr5 22521554 22521603 -177108547 - L2 LINE L2 -248 3065 3016 4129 146 12 1 chr5 22521603 22522274 -177107876 - L1PA15 LINE L1 0 6165 5488 294 408 26 64 chr5 22522274 22522601 -177107549 - L2 LINE L2 -297 3016 2700 854 217 12 0 chr5 22522915 22523076 -177107074 - FRAM SINE Alu -14 162 1 193 284 52 69 chr5 22523799 22523915 -177106235 - MER5A DNA MER1_type -6 183 70 342 237 52 30 chr5 22524648 22524783 -177105367 + L1M4 LINE L1 3312 3449 -2697 1426 225 74 64 chr5 22524788 22525290 -177104860 + MER76 LTR ERV 35 541 -147 1472 173 54 26 chr5 22525290 22525845 -177104305 + L1MC3 LINE L1 7077 7783 -2 2981 196 5 32 chr5 22526450 22526496 -177103654 - L1MB5 LINE L1 -27 6147 6101 2307 97 3 0 chr5 22526496 22526794 -177103356 + AluSp SINE Alu 1 299 -14 2981 196 5 32 chr5 22526794 22527376 -177102774 - L1MB5 LINE L1 -73 6101 5536 188 211 154 0 chr5 22527536 22527588 -177102562 + MIR SINE MIR 109 168 -94 263 357 100 21 chr5 22527861 22528200 -177101950 + L2 LINE L2 2217 2582 -732 403 203 38 0 chr5 22528274 22528353 -177101797 + MER69 DNA AcHobo 1 82 -2444 420 261 0 0 chr5 22528506 22528598 -177101552 + MER69 DNA AcHobo 2435 2526 0 2659 174 8 63 chr5 22528728 22529111 -177101039 - MER41C LTR ERV1 0 554 212 2234 127 0 0 chr5 22529111 22529410 -177100740 + AluSx SINE Alu 3 301 -11 2659 174 8 63 chr5 22529410 22529612 -177100538 - MER41C LTR ERV1 -342 212 1 6907 255 89 49 chr5 22529732 22530201 -177099949 - L1MC3 LINE L1 -1 8064 7615 1501 201 82 37 chr5 22530201 22530580 -177099570 + MSTD LTR MaLR 1 396 0 6907 255 89 49 chr5 22530580 22531220 -177098930 - L1MC3 LINE L1 -450 7615 7002 204 40 0 0 chr5 22531220 22531245 -177098905 + (CA)n Simple_repeat Simple_repeat 2 26 0 6907 255 89 49 chr5 22531245 22532975 -177097175 - L1MC3 LINE L1 -1063 7002 5052 1883 144 45 28 chr5 22532975 22533330 -177096820 + THE1B LTR MaLR 1 361 -3 6907 255 89 49 chr5 22533330 22534058 -177096092 - L1MC3 LINE L1 -3013 5052 4355 1112 221 107 56 chr5 22534062 22534497 -177095653 + MLT2B1 LTR ERVL 1 512 -8 1774 268 112 42 chr5 22534543 22536182 -177093968 - L1MC3 LINE L1 -3116 3310 1316 318 26 0 0 chr5 22536182 22536221 -177093929 + (TG)n Simple_repeat Simple_repeat 2 40 0 1774 268 112 42 chr5 22536221 22536794 -177093356 - L1MC3 LINE L1 -5110 1316 784 190 325 92 33 chr5 22536801 22536921 -177093229 + L2 LINE L2 2292 2418 -896 2184 109 0 0 chr5 22537207 22537510 -177092640 + AluSc SINE Alu 1 303 -6 181 385 13 13 chr5 22538052 22538130 -177092020 - L2 LINE L2 0 3272 3195 699 158 108 0 chr5 22539064 22539203 -177090947 + AluSg1 SINE Alu 3 156 -153 201 133 0 0 chr5 22540007 22540037 -177090113 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 384 193 151 82 chr5 22541767 22542134 -177088016 - MLT1H LTR MaLR -4 563 152 249 169 17 51 chr5 22542178 22542237 -177087913 - MLT1H LTR MaLR -391 158 102 1165 121 0 0 chr5 22545072 22545229 -177084921 + AluSg1 SINE Alu 131 287 -25 24 0 0 0 chr5 22545250 22545274 -177084876 + AT_rich Low_complexity Low_complexity 1 24 0 657 123 47 0 chr5 22545274 22545380 -177084770 - HY1 scRNA scRNA -1 111 1 22 35 0 0 chr5 22545420 22545449 -177084701 + AT_rich Low_complexity Low_complexity 1 29 0 6223 90 1 6 chr5 22545670 22546540 -177083610 - L1P LINE L1 -1242 4904 4039 438 168 30 20 chr5 22547621 22547722 -177082428 - L1ME3A LINE L1 -182 5988 5887 22 0 0 0 chr5 22547864 22547886 -177082264 + AT_rich Low_complexity Low_complexity 1 22 0 233 169 92 31 chr5 22547912 22547977 -177082173 + MLT1I LTR MaLR 318 386 -23 232 280 13 0 chr5 22548008 22548083 -177082067 - L1MEc LINE L1 -3806 2576 2501 347 303 93 47 chr5 22548471 22549144 -177081006 - L1MEc LINE L1 -4671 1713 1013 1447 210 17 0 chr5 22549227 22549518 -177080632 + AluJb SINE Alu 1 296 -16 1801 281 71 26 chr5 22549598 22550030 -177080120 - L1ME1 LINE L1 -5 6161 5750 1470 222 48 16 chr5 22550030 22550408 -177079742 - MLT1B LTR MaLR 0 390 1 1801 281 71 26 chr5 22550408 22551626 -177078524 - L1ME1 LINE L1 -416 5750 4441 22 35 0 0 chr5 22551772 22551801 -177078349 + AT_rich Low_complexity Low_complexity 1 29 0 204 163 23 0 chr5 22554128 22554171 -177075979 + (TA)n Simple_repeat Simple_repeat 2 45 0 1717 160 0 22 chr5 22554543 22554862 -177075288 + AluSx SINE Alu 1 312 0 1919 116 27 3 chr5 22555151 22555452 -177074698 + AluSq SINE Alu 3 310 -3 342 0 0 0 chr5 22555708 22555746 -177074404 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1910 121 0 0 chr5 22556002 22556294 -177073856 + AluSq SINE Alu 21 312 0 28 48 0 0 chr5 22556976 22557018 -177073132 + AT_rich Low_complexity Low_complexity 1 42 0 180 368 81 0 chr5 22557022 22557109 -177073041 - MIR3 SINE MIR -28 180 87 748 155 13 2 chr5 22557109 22557263 -177072887 - MLT1A1 LTR MaLR -2 363 236 357 182 20 81 chr5 22557272 22557371 -177072779 - MLT1A1 LTR MaLR -266 99 7 1337 216 68 60 chr5 22557563 22558064 -177072086 + MLT1D LTR MaLR 1 505 0 32 67 0 0 chr5 22558524 22558584 -177071566 + AT_rich Low_complexity Low_complexity 1 60 0 261 350 88 8 chr5 22559642 22559882 -177070268 + MIR SINE MIR 3 261 -1 27 29 0 0 chr5 22559965 22559999 -177070151 + AT_rich Low_complexity Low_complexity 1 34 0 24492 150 15 14 chr5 22561299 22563895 -177066255 - L1PA8A LINE L1 -1 6445 3854 207 0 0 0 chr5 22563895 22563918 -177066232 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 24492 150 15 14 chr5 22563918 22567688 -177062462 - L1PA8A LINE L1 -2592 3854 4 1837 166 0 0 chr5 22567865 22568172 -177061978 - AluSx SINE Alu -5 307 1 1420 130 0 14 chr5 22568209 22568424 -177061726 + AluSx SINE Alu 5 216 -96 239 220 40 20 chr5 22570355 22570455 -177059695 + (TA)n Simple_repeat Simple_repeat 2 103 0 1045 241 120 35 chr5 22570615 22570931 -177059219 - MLT1A2 LTR MaLR -31 343 1 180 302 128 12 chr5 22571023 22571109 -177059041 + L2 LINE L2 2111 2206 -1108 204 370 77 6 chr5 22571210 22571391 -177058759 + L2 LINE L2 3120 3313 0 347 290 161 14 chr5 22571538 22571755 -177058395 + MER110 LTR ERV1 91 339 -152 2959 127 33 0 chr5 22571758 22572207 -177057943 + MER1A DNA MER1_type 66 529 0 305 279 130 13 chr5 22572221 22572375 -177057775 + MER110 LTR ERV1 320 491 0 469 251 95 56 chr5 22573134 22573365 -177056785 - MER68 LTR ERV1 -77 485 246 1716 173 3 14 chr5 22574355 22574650 -177055500 - AluJb SINE Alu 0 312 21 25 51 0 0 chr5 22575299 22575338 -177054812 + AT_rich Low_complexity Low_complexity 1 39 0 947 206 27 38 chr5 22575874 22575940 -177054210 - L1MC3 LINE L1 -21 7764 7699 2508 113 22 8 chr5 22575940 22576310 -177053840 + THE1C LTR MaLR 1 375 0 947 206 27 38 chr5 22576310 22576505 -177053645 - L1MC3 LINE L1 -86 7699 7506 605 247 48 12 chr5 22577123 22577289 -177052861 - MIR SINE MIR -2 260 89 1140 160 52 5 chr5 22577380 22577593 -177052557 + MER39 LTR ERV1 485 707 0 240 174 0 22 chr5 22577624 22577670 -177052480 + MER39 LTR ERV1 660 704 -3 2131 127 135 5 chr5 22578086 22578465 -177051685 - MSTA LTR MaLR 0 428 1 966 242 29 6 chr5 22578769 22579083 -177051067 - MER33 DNA MER1_type 0 324 4 405 279 0 36 chr5 22579102 22579213 -177050937 + MER5A DNA MER1_type 9 115 -74 181 291 18 0 chr5 22579191 22579246 -177050904 - MER5B DNA MER1_type -121 57 2 * 203 244 0 0 chr5 22579496 22579541 -177050609 + (TG)n Simple_repeat Simple_repeat 2 46 0 242 407 0 9 chr5 22580067 22580175 -177049975 + MIR SINE MIR 6 112 -150 3368 116 16 4 chr5 22580207 22580708 -177049442 - MER84 LTR ERV1 0 507 1 225 94 0 0 chr5 22580967 22580999 -177049151 + (CAT)n Simple_repeat Simple_repeat 1 32 0 1326 99 6 0 chr5 22581059 22581231 -177048919 - AluSp SINE Alu -17 296 124 194 300 170 0 chr5 22581243 22581343 -177048807 - MIR SINE MIR -81 181 65 1774 169 24 71 chr5 22581610 22582019 -177048131 + MLT1B LTR MaLR 1 390 0 376 133 0 17 chr5 22582158 22582218 -177047932 - Tigger5 DNA MER2_type 0 2323 2265 369 109 0 0 chr5 22582417 22582472 -177047678 + (TAA)n Simple_repeat Simple_repeat 1 55 0 839 304 124 13 chr5 22583365 22583760 -177046390 + MER110-int LTR ERV1 4177 4615 -32 826 274 46 69 chr5 22583948 22584338 -177045812 + MER110 LTR ERV1 103 483 -8 23 33 0 0 chr5 22585682 22585712 -177044438 + AT_rich Low_complexity Low_complexity 1 30 0 390 42 0 0 chr5 22585922 22585970 -177044180 + (TG)n Simple_repeat Simple_repeat 1 48 0 214 244 0 0 chr5 22585970 22586011 -177044139 + polypurine Low_complexity Low_complexity 2 42 0 1472 185 10 49 chr5 22586069 22586377 -177043773 + AluJo SINE Alu 12 307 -5 24 77 0 0 chr5 22586482 22586534 -177043616 + AT_rich Low_complexity Low_complexity 1 52 0 2432 54 0 3 chr5 22587568 22587866 -177042284 - AluY SINE Alu -1 310 14 2692 136 17 110 chr5 22589039 22589620 -177040530 + MER1A DNA MER1_type 1 527 0 1372 196 91 95 chr5 22589672 22590112 -177040038 + MER34B LTR ERV1 35 475 -90 2265 102 3 0 chr5 22590112 22590416 -177039734 + AluSc SINE Alu 1 305 -4 1372 196 91 95 chr5 22590416 22590499 -177039651 + MER34B LTR ERV1 475 510 -55 3341 229 47 33 chr5 22590499 22590891 -177039259 - MER21B LTR ERV1 -3 860 475 1518 187 0 28 chr5 22590891 22591175 -177038975 - AluJo SINE Alu -31 281 6 3341 229 47 33 chr5 22591175 22591630 -177038520 - MER21B LTR ERV1 -388 475 1 1372 196 91 95 chr5 22591630 22591685 -177038465 + MER34B LTR ERV1 510 564 -1 1042 248 63 27 chr5 22591697 22591996 -177038154 + MLT1E LTR MaLR 284 593 0 426 255 38 118 chr5 22592365 22592628 -177037522 - MIR SINE MIR 0 262 21 25 31 0 0 chr5 22593495 22593527 -177036623 + AT_rich Low_complexity Low_complexity 1 32 0 5536 121 18 1 chr5 22593527 22594365 -177035785 - L1PA10 LINE L1 -11 7595 6744 2306 161 3 0 chr5 22594368 22594734 -177035416 - THE1C LTR MaLR -8 367 1 16137 188 12 30 chr5 22594736 22596359 -177033791 - L1PA10 LINE L1 -841 6743 5092 2156 92 0 7 chr5 22596359 22596669 -177033481 - AluY SINE Alu 0 308 1 16137 188 12 30 chr5 22596669 22600588 -177029562 - L1PA10 LINE L1 -2492 5092 11 387 286 34 20 chr5 22601411 22601558 -177028592 + MIR SINE MIR 103 251 -11 258 161 0 18 chr5 22601662 22601718 -177028432 - L1PA12 LINE L1 -2 6166 6112 1877 145 35 29 chr5 22601719 22602029 -177028121 - AluSx SINE Alu 0 312 1 2205 109 0 7 chr5 22602928 22603231 -177026919 - AluSq SINE Alu -12 301 1 310 243 148 33 chr5 22604275 22604485 -177025665 - L1M2 LINE L1 -3783 2432 2199 266 255 130 57 chr5 22604947 22605315 -177024835 - L1M2 LINE L1 -4284 1932 1389 279 0 0 0 chr5 22605335 22605366 -177024784 + (TG)n Simple_repeat Simple_repeat 2 32 0 871 197 5 30 chr5 22605949 22606147 -177024003 + L1PB1 LINE L1 3 195 -6668 * 10597 113 113 10 chr5 22606132 22607932 -177022218 + L1PB1 LINE L1 620 2604 -4259 * 12378 201 26 33 chr5 22607930 22610295 -177019855 + L1PB1 LINE L1 2808 5129 -1738 2196 114 3 0 chr5 22610295 22610593 -177019557 + AluSp SINE Alu 1 299 -14 12378 201 26 33 chr5 22610593 22612317 -177017833 + L1PB1 LINE L1 5129 6865 -2 397 327 31 75 chr5 22613568 22613822 -177016328 + MIR SINE MIR 2 244 -18 205 343 86 23 chr5 22613964 22614139 -177016011 + MIR SINE MIR 29 214 -48 1169 235 7 39 chr5 22614546 22614827 -177015323 + MSTD LTR MaLR 117 388 -8 50 42 0 0 chr5 22614988 22615059 -177015091 + AT_rich Low_complexity Low_complexity 1 71 0 319 358 91 11 chr5 22615216 22615403 -177014747 + MIR SINE MIR 56 257 -5 36 70 0 0 chr5 22615409 22615480 -177014670 + AT_rich Low_complexity Low_complexity 1 71 0 25 65 0 0 chr5 22617274 22617320 -177012830 + AT_rich Low_complexity Low_complexity 1 46 0 200 213 0 0 chr5 22618547 22618594 -177011556 + T-rich Low_complexity Low_complexity 1 47 0 303 297 79 79 chr5 22619941 22620106 -177010044 - L1ME3A LINE L1 -11 6159 5995 336 258 91 40 chr5 22620345 22620543 -177009607 - L1ME3A LINE L1 -253 5868 5661 1474 236 67 0 chr5 22620552 22620938 -177009212 - L1MB4 LINE L1 -1 6179 5768 1179 290 94 2 chr5 22620938 22621418 -177008732 - L1ME3A LINE L1 -241 5929 5406 525 296 75 19 chr5 22621434 22621859 -177008291 - L1ME3A LINE L1 -814 5332 4884 382 155 0 0 chr5 22623812 22623883 -177006267 - L1PB4 LINE L1 0 6156 6086 1531 197 186 19 chr5 22624151 22624190 -177005960 - MSTB LTR MaLR 0 426 395 1743 193 3 0 chr5 22624190 22624486 -177005664 + AluJb SINE Alu 1 297 -15 192 97 0 0 chr5 22624486 22624517 -177005633 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1531 197 186 19 chr5 22624517 22624841 -177005309 - MSTB LTR MaLR -30 396 1 8551 205 11 2 chr5 22624841 22626477 -177003673 - MSTA-int LTR MaLR 0 1651 2 1840 170 141 5 chr5 22626479 22626856 -177003294 - MSTA LTR MaLR 0 428 1 202 338 135 23 chr5 22626860 22626993 -177003157 + L2 LINE L2 2372 2519 -795 26 30 0 0 chr5 22627273 22627306 -177002844 + AT_rich Low_complexity Low_complexity 1 33 0 903 299 78 25 chr5 22627846 22628204 -177001946 + LTR16C LTR ERVL 101 477 -14 2581 58 0 0 chr5 22628884 22629195 -177000955 + AluY SINE Alu 1 311 0 234 0 0 0 chr5 22629380 22629406 -177000744 + (TG)n Simple_repeat Simple_repeat 2 27 0 225 157 0 39 chr5 22629406 22629457 -177000693 + (TA)n Simple_repeat Simple_repeat 1 49 0 684 313 38 4 chr5 22629636 22629876 -177000274 + MIR SINE MIR 3 250 -12 22 0 0 0 chr5 22630336 22630358 -176999792 + AT_rich Low_complexity Low_complexity 1 22 0 2000 152 0 0 chr5 22630401 22630710 -176999440 + AluSx SINE Alu 1 309 -3 24 77 0 0 chr5 22631336 22631388 -176998762 + AT_rich Low_complexity Low_complexity 1 52 0 2037 118 0 33 chr5 22631876 22632182 -176997968 - AluSg SINE Alu -12 298 3 2200 235 17 0 chr5 22632395 22632855 -176997295 + Tigger7 DNA MER2_type 53 520 -213 1761 136 25 113 chr5 22632867 22633220 -176996930 - Tigger3(Golem) DNA MER2_type -2 3027 26 386 275 0 0 chr5 22633227 22633307 -176996843 + Tigger7 DNA MER2_type 2403 2482 -5 1157 276 42 30 chr5 22633311 22633713 -176996437 - MLT1C LTR MaLR -1 466 60 207 0 0 0 chr5 22633748 22633771 -176996379 + (AATAG)n Simple_repeat Simple_repeat 2 24 0 315 299 85 37 chr5 22633784 22634055 -176996095 + L1ME4a LINE L1 5826 6109 -12 2159 141 75 0 chr5 22634143 22634518 -176995632 + MER57A LTR ERV1 1 403 0 229 191 43 0 chr5 22634525 22634572 -176995578 + L1MC4 LINE L1 6654 6702 -1340 24 0 0 0 chr5 22635983 22636007 -176994143 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr5 22636297 22636323 -176993827 + AT_rich Low_complexity Low_complexity 1 26 0 220 310 103 35 chr5 22636868 22637013 -176993137 + MER5A DNA MER1_type 7 161 -28 692 174 0 8 chr5 22638734 22638866 -176991284 - FLAM_C SINE Alu 0 133 3 2261 109 0 0 chr5 22640162 22640473 -176989677 + AluY SINE Alu 1 311 0 31 0 0 0 chr5 22640818 22640849 -176989301 + AT_rich Low_complexity Low_complexity 1 31 0 184 77 51 0 chr5 22640901 22640940 -176989210 + (TA)n Simple_repeat Simple_repeat 1 41 0 25 0 0 0 chr5 22641721 22641746 -176988404 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 22642459 22642484 -176987666 + AT_rich Low_complexity Low_complexity 1 25 0 723 185 167 0 chr5 22642509 22642671 -176987479 - MER5A DNA MER1_type 0 189 1 258 250 10 39 chr5 22642718 22642822 -176987328 + MER97a DNA MER1_type? 84 184 -710 355 343 43 0 chr5 22643138 22643278 -176986872 - LTR16A LTR ERVL 0 450 305 578 247 91 85 chr5 22643280 22643632 -176986518 + MLT2B1 LTR ERVL 1 354 -60 287 81 40 27 chr5 22643639 22643713 -176986437 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 238 132 26 0 chr5 22643722 22643760 -176986390 + MLT2B1 LTR ERVL 406 444 0 262 344 23 16 chr5 22643761 22643889 -176986261 - LTR16A LTR ERVL -144 306 178 586 283 76 83 chr5 22644187 22644328 -176985822 - HERVL LTR ERVL -1923 3731 3591 1875 169 85 2 chr5 22644328 22644730 -176985420 - LTR23 LTR ERV1 -2 435 1 586 283 76 83 chr5 22644730 22645008 -176985142 - HERVL LTR ERVL -2063 3591 3315 2354 310 99 30 chr5 22645508 22645984 -176984166 - HERVL LTR ERVL -1907 3089 2648 1550 238 31 8 chr5 22645984 22646371 -176983779 - MSTD LTR MaLR 0 396 1 2354 310 99 30 chr5 22646371 22647184 -176982966 - HERVL LTR ERVL -2348 2648 1710 402 381 25 12 chr5 22647241 22647485 -176982665 - HERVL LTR ERVL -3416 1580 1334 266 374 54 9 chr5 22647674 22647896 -176982254 - HERVL LTR ERVL -3680 1316 1085 2135 109 7 0 chr5 22648006 22648291 -176981859 - AluSp SINE Alu -24 289 3 618 335 43 33 chr5 22648306 22648703 -176981447 - HERVL LTR ERVL -4138 858 458 711 275 51 36 chr5 22648808 22649084 -176981066 - HERVL LTR ERVL -4709 287 8 686 325 55 52 chr5 22649102 22649285 -176980865 - LTR16A LTR ERVL -14 436 255 1107 40 33 13 chr5 22649285 22649462 -176980688 + L1PA3 LINE L1 5998 6155 0 686 325 55 52 chr5 22649462 22649678 -176980472 - LTR16A LTR ERVL -195 255 36 1553 172 14 84 chr5 22650125 22650226 -176979924 - Tigger2a DNA MER2_type -2365 343 236 2087 107 30 0 chr5 22650226 22650525 -176979625 - AluY SINE Alu -3 308 1 1553 172 14 84 chr5 22650525 22650790 -176979360 - Tigger2a DNA MER2_type -2472 236 3 394 242 0 32 chr5 22650855 22650950 -176979200 - MLT1E1 LTR MaLR -503 151 60 347 274 0 0 chr5 22651053 22651137 -176979013 + L2 LINE L2 1885 1968 -1346 5224 167 28 15 chr5 22652863 22654324 -176975826 + L1MA8 LINE L1 4777 6249 -42 294 282 69 88 chr5 22654929 22655284 -176974866 - HAL1 LINE L1 -120 2387 2027 1955 102 47 70 chr5 22655284 22655509 -176974641 - THE1C LTR MaLR 0 375 161 2015 88 3 82 chr5 22655509 22655840 -176974310 + AluSq SINE Alu 3 307 -6 1955 102 47 70 chr5 22655840 22655998 -176974152 - THE1C LTR MaLR -214 161 1 294 282 69 88 chr5 22655998 22656029 -176974121 - HAL1 LINE L1 -480 2027 1997 3123 106 22 2 chr5 22656029 22656473 -176973677 - MLT2A2 LTR ERVL 0 453 1 294 282 69 88 chr5 22656473 22656971 -176973179 - HAL1 LINE L1 -510 1997 1519 345 276 129 72 chr5 22657014 22657348 -176972802 - HAL1 LINE L1 -1082 1425 1066 2077 84 0 24 chr5 22657348 22657635 -176972515 + AluSp SINE Alu 13 292 -21 345 276 129 72 chr5 22657635 22657673 -176972477 - HAL1 LINE L1 -1441 1066 1032 421 270 108 54 chr5 22658080 22658162 -176971988 - MLT1I LTR MaLR -110 299 223 1989 158 116 13 chr5 22658162 22658549 -176971601 + MSTA LTR MaLR 2 428 0 421 270 108 54 chr5 22658549 22658670 -176971480 - MLT1I LTR MaLR -186 223 85 183 42 0 0 chr5 22658686 22658710 -176971440 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 295 56 0 0 chr5 22659448 22659484 -176970666 - U2 snRNA snRNA -152 36 1 25 0 0 0 chr5 22659673 22659698 -176970452 + AT_rich Low_complexity Low_complexity 1 25 0 360 291 60 0 chr5 22660271 22660405 -176969745 + LTR50 LTR ERVL 1 142 -653 1445 119 13 0 chr5 22660789 22661016 -176969134 + L1MA1 LINE L1 6073 6302 0 24 67 0 0 chr5 22661457 22661502 -176968648 + AT_rich Low_complexity Low_complexity 1 45 0 306 87 0 0 chr5 22662146 22662192 -176967958 + (TG)n Simple_repeat Simple_repeat 1 46 0 868 237 117 53 chr5 22662664 22663006 -176967144 - MLT1A1 LTR MaLR 0 365 2 243 260 48 27 chr5 22663483 22663629 -176966521 - Zaphod DNA AcHobo -32 3999 3851 201 39 0 0 chr5 22664022 22664048 -176966102 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 313 389 46 11 chr5 22664111 22664286 -176965864 - MER115 DNA AcHobo -360 333 153 2760 141 13 2 chr5 22664295 22664741 -176965409 - MER67C LTR ERV1 0 710 260 1896 136 121 9 chr5 22664741 22664982 -176965168 + MER51B LTR ERV1 1 292 -85 2290 102 3 0 chr5 22664982 22665287 -176964863 - AluSp SINE Alu -7 306 1 1896 136 121 9 chr5 22665287 22665384 -176964766 + MER51B LTR ERV1 292 377 0 822 55 0 71 chr5 22665384 22665511 -176964639 + MER51B-int LTR ERV1 1 118 -7698 3907 170 10 13 chr5 22665514 22666224 -176963926 + MER51B-int LTR ERV1 788 1495 -6321 541 135 114 115 chr5 22666295 22666492 -176963658 + MER4A LTR ERV1 276 648 -131 6687 117 68 8 chr5 22666492 22667808 -176962342 + MER51B-int LTR ERV1 1810 3265 -4551 1463 151 23 0 chr5 22667823 22668081 -176962069 + MER51B-int LTR ERV1 2824 3087 -2859 3854 104 23 95 chr5 22668082 22668776 -176961374 - LTR9B LTR ERV1 0 644 1 891 220 5 28 chr5 22668786 22669004 -176961146 + MER51B-int LTR ERV1 1747 1959 -3258 1953 114 12 4 chr5 22669013 22669410 -176960740 + MER51B-int LTR ERV1 2210 2654 -2563 * 10498 122 55 22 chr5 22669397 22671084 -176959066 + MER51B-int LTR ERV1 5407 7148 -389 557 194 85 8 chr5 22671084 22671213 -176958937 + LTR54B LTR ERV1 3 141 -357 1896 151 78 0 chr5 22671213 22671532 -176958618 + MER51B-int LTR ERV1 7470 7813 -3 2237 106 109 0 chr5 22671536 22671876 -176958274 + MER51B LTR ERV1 1 377 0 1382 137 66 0 chr5 22671876 22672117 -176958033 - MER67C LTR ERV1 -447 263 7 357 24 0 0 chr5 22672164 22672206 -176957944 + (TG)n Simple_repeat Simple_repeat 2 43 0 269 194 48 32 chr5 22672243 22672305 -176957845 - MER115 DNA AcHobo -621 72 10 47 19 0 0 chr5 22672601 22672655 -176957495 + AT_rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr5 22672730 22672751 -176957399 + AT_rich Low_complexity Low_complexity 1 21 0 193 224 12 12 chr5 22672761 22672846 -176957304 + (TA)n Simple_repeat Simple_repeat 2 86 0 22 56 0 0 chr5 22672956 22672992 -176957158 + AT_rich Low_complexity Low_complexity 1 36 0 29 0 0 0 chr5 22673098 22673127 -176957023 + AT_rich Low_complexity Low_complexity 1 29 0 283 173 34 34 chr5 22673158 22673337 -176956813 + (TA)n Simple_repeat Simple_repeat 2 180 0 479 140 22 34 chr5 22673356 22673534 -176956616 + (TA)n Simple_repeat Simple_repeat 1 176 0 438 181 23 12 chr5 22673553 22673724 -176956426 + (TA)n Simple_repeat Simple_repeat 2 174 0 29 0 0 0 chr5 22673746 22673775 -176956375 + AT_rich Low_complexity Low_complexity 1 29 0 213 450 0 0 chr5 22673983 22674103 -176956047 - MIR SINE MIR -59 149 30 1873 161 18 174 chr5 22674352 22674911 -176955239 - MER70A LTR ERVL 0 472 1 612 318 70 32 chr5 22675140 22675571 -176954579 - HERVL LTR ERVL -420 5344 4898 319 273 16 48 chr5 22675896 22676037 -176954113 + MLT1I LTR MaLR 91 184 -225 744 295 40 80 chr5 22676234 22676570 -176953580 - HERVL LTR ERVL -884 4604 4282 789 235 61 24 chr5 22676570 22676783 -176953367 + MER58A DNA MER1_type 4 224 0 744 295 40 80 chr5 22676783 22676846 -176953304 - HERVL LTR ERVL -1206 4282 4218 3732 134 45 3 chr5 22676924 22677542 -176952608 - LTR9B LTR ERV1 0 644 1 247 295 16 57 chr5 22677860 22677982 -176952168 - L2 LINE L2 -2152 1162 1046 303 363 32 19 chr5 22678023 22678180 -176951970 - L2 LINE L2 -2740 574 416 486 321 46 25 chr5 22678191 22678428 -176951722 + MIR SINE MIR 5 246 -16 966 227 35 5 chr5 22678755 22678958 -176951192 - MER58A DNA MER1_type -6 218 10 1215 191 233 11 chr5 22678958 22679340 -176950810 - MLT1C LTR MaLR 0 467 1 2157 106 0 16 chr5 22679568 22679871 -176950279 - AluSg SINE Alu -12 298 1 203 250 36 24 chr5 22680387 22680471 -176949679 + (CATATA)n Simple_repeat Simple_repeat 3 87 0 420 55 0 0 chr5 22680498 22680553 -176949597 + (TG)n Simple_repeat Simple_repeat 2 56 0 407 253 22 90 chr5 22681108 22681233 -176948917 - MIR SINE MIR -21 241 130 1527 250 124 48 chr5 22681233 22681838 -176948312 - MLT1E1 LTR MaLR -3 651 1 407 253 22 90 chr5 22681838 22681890 -176948260 - MIR SINE MIR -132 130 76 1528 265 51 18 chr5 22681987 22682478 -176947672 - LTR40a LTR ERVL 0 519 13 782 255 43 51 chr5 22682490 22682745 -176947405 - HERVL40 LTR ERVL 0 5530 5278 452 334 48 48 chr5 22682723 22683097 -176947053 - MER89-int LTR ERV1 -310 6491 6118 * 1966 114 17 10 chr5 22683140 22683448 -176946702 - AluY SINE Alu 0 311 1 1133 307 63 35 chr5 22683529 22684066 -176946084 - HERVL40 LTR ERVL -3915 1615 1064 372 296 0 78 chr5 22684070 22684212 -176945938 - HERVL40 LTR ERVL -4616 914 784 195 42 0 0 chr5 22684264 22684288 -176945862 + (TAATG)n Simple_repeat Simple_repeat 1 24 0 1270 205 32 87 chr5 22684291 22684671 -176945479 + MLT1A2 LTR MaLR 16 374 0 494 333 12 0 chr5 22684678 22684843 -176945307 - HERVL40 LTR ERVL -4799 731 565 1270 272 30 92 chr5 22684886 22685463 -176944687 - HERVL40 LTR ERVL -4962 568 28 1133 245 70 47 chr5 22685479 22685924 -176944226 - LTR40b LTR ERVL 0 462 8 2145 118 23 0 chr5 22685953 22686259 -176943891 + AluSp SINE Alu 1 313 0 548 228 38 97 chr5 22686337 22686574 -176943576 - MIR SINE MIR -23 239 17 297 312 110 9 chr5 22687514 22687623 -176942527 + MIR SINE MIR 29 148 -114 2258 91 0 28 chr5 22688984 22689302 -176940848 - AluY SINE Alu -1 310 2 2411 73 0 19 chr5 22690160 22690473 -176939677 + AluY SINE Alu 5 311 0 21 71 0 0 chr5 22690626 22690668 -176939482 + AT_rich Low_complexity Low_complexity 1 42 0 2082 54 108 0 chr5 22691156 22691434 -176938716 + AluY SINE Alu 1 308 -3 2302 72 13 35 chr5 22691442 22691760 -176938390 + AluSp SINE Alu 1 311 -2 1629 188 47 3 chr5 22691941 22692282 -176937868 - L1MA6 LINE L1 -5 6295 5940 22 56 0 0 chr5 22692410 22692446 -176937704 + AT_rich Low_complexity Low_complexity 1 36 0 1036 261 178 53 chr5 22693230 22693909 -176936241 - LTR41 LTR ERVL -1 772 9 524 248 41 7 chr5 22694179 22694324 -176935826 - MER58B DNA MER1_type -24 317 168 23 33 0 0 chr5 22694324 22694354 -176935796 + AT_rich Low_complexity Low_complexity 1 30 0 252 200 215 0 chr5 22694354 22694419 -176935731 - MER58B DNA MER1_type -251 90 12 22 0 0 0 chr5 22694656 22694678 -176935472 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 22695037 22695061 -176935089 + AT_rich Low_complexity Low_complexity 1 24 0 2130 152 16 21 chr5 22695206 22695582 -176934568 - THE1C LTR MaLR 0 375 2 1479 174 48 7 chr5 22695582 22695852 -176934298 + MLT1A1 LTR MaLR 81 361 -4 1437 210 7 20 chr5 22695998 22696303 -176933847 + AluJo SINE Alu 1 301 -11 323 324 40 47 chr5 22696724 22696872 -176933278 + MIR SINE MIR 52 198 -64 1953 147 25 77 chr5 22698171 22698573 -176931577 - Tigger2 DNA MER2_type 0 2718 2338 270 0 0 0 chr5 22698587 22698617 -176931533 + (CA)n Simple_repeat Simple_repeat 2 31 0 25 0 0 0 chr5 22698825 22698850 -176931300 + AT_rich Low_complexity Low_complexity 1 25 0 4937 230 31 26 chr5 22698868 22701077 -176929073 - L1MC1 LINE L1 -6 6607 4391 886 90 0 0 chr5 22701088 22701199 -176928951 + AluSp SINE Alu 1 111 -202 1851 89 4 0 chr5 22701199 22701434 -176928716 - AluSp SINE Alu -77 236 1 6221 197 83 32 chr5 22701440 22702420 -176927730 - L1MC1 LINE L1 -3825 2601 1672 2049 137 3 13 chr5 22702420 22702733 -176927417 - AluSg SINE Alu 0 310 1 6221 197 83 32 chr5 22702733 22704140 -176926010 - L1MC1 LINE L1 -4754 1672 25 380 297 0 0 chr5 22704238 22704329 -176925821 - MER63A DNA MER1_type -18 192 102 3973 158 38 6 chr5 22704333 22705022 -176925128 + MER50 LTR ERV1 1 711 -23 358 337 86 29 chr5 22705173 22705452 -176924698 - MLT1K LTR MaLR -15 573 279 516 16 0 0 chr5 22705529 22705590 -176924560 + (TG)n Simple_repeat Simple_repeat 2 62 0 180 0 0 0 chr5 22705593 22705613 -176924537 + (GA)n Simple_repeat Simple_repeat 1 20 0 1594 229 8 11 chr5 22705946 22706304 -176923846 - MLT1A1 LTR MaLR -8 357 1 900 232 38 0 chr5 22708016 22708227 -176921923 - MER58A DNA MER1_type -5 219 1 21 36 0 0 chr5 22708400 22708428 -176921722 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 22708555 22708586 -176921564 + AT_rich Low_complexity Low_complexity 1 31 0 261 208 8 136 chr5 22708680 22708805 -176921345 + LTR33A LTR ERVL 2 110 -413 375 278 144 0 chr5 22708826 22709006 -176921144 + LTR33A LTR ERVL 318 523 0 206 306 134 30 chr5 22709575 22709709 -176920441 + MIR SINE MIR 82 229 -33 17587 71 2 15 chr5 22710724 22713930 -176916220 - L1PA6 LINE L1 0 6154 2975 18320 122 16 12 chr5 22713933 22716757 -176913393 - L1PA6 LINE L1 -3303 2843 11 372 385 6 0 chr5 22717009 22717170 -176912980 + L2 LINE L2 2371 2532 -782 258 143 0 0 chr5 22717299 22717348 -176912802 + (CA)n Simple_repeat Simple_repeat 2 50 0 204 289 58 0 chr5 22717356 22717408 -176912742 + L2 LINE L2 2702 2756 -558 223 355 13 0 chr5 22717747 22717823 -176912327 + L2 LINE L2 3237 3313 0 27 29 0 0 chr5 22718151 22718185 -176911965 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr5 22718390 22718412 -176911738 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 22718894 22718916 -176911234 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr5 22718989 22719031 -176911119 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr5 22719073 22719103 -176911047 + AT_rich Low_complexity Low_complexity 1 30 0 404 164 0 0 chr5 22719961 22720022 -176910128 + AluS SINE Alu 3 63 -240 1705 134 4 0 chr5 22770022 22770276 -176859874 + MER51B LTR ERV1 123 377 0 5820 219 23 2 chr5 22770276 22771490 -176858660 - MSTB-int LTR MaLR -412 1239 1 1647 204 29 66 chr5 22771490 22771932 -176858218 - MSTB LTR MaLR 0 426 1 4070 185 28 5 chr5 22771932 22773050 -176857100 + L1MA2 LINE L1 2066 4306 -3259 4504 136 48 11 chr5 22773055 22773782 -176856368 + THE1C-int LTR MaLR 815 1568 -12 1802 152 58 19 chr5 22773793 22774154 -176855996 + THE1C LTR MaLR 1 375 0 1677 212 59 29 chr5 22774163 22774703 -176855447 + MLT2A2 LTR ERVL 1 554 0 6823 177 38 37 chr5 22774703 22777211 -176852939 + L1MA2 LINE L1 5229 7723 0 46 45 0 0 chr5 22777211 22777278 -176852872 + AT_rich Low_complexity Low_complexity 1 67 0 2404 65 0 23 chr5 22778255 22778564 -176851586 - AluSc SINE Alu -7 302 1 204 266 57 65 chr5 22779231 22779355 -176850795 + L2 LINE L2 3137 3259 -54 23 33 0 0 chr5 22779766 22779796 -176850354 + AT_rich Low_complexity Low_complexity 1 30 0 393 306 36 30 chr5 22782414 22782751 -176847399 - L1MEc LINE L1 -1542 4673 4335 594 290 109 19 chr5 22782754 22783130 -176847020 - L1MEc LINE L1 -1898 4317 3908 1755 206 39 157 chr5 22783135 22783266 -176846884 - L1PB3 LINE L1 0 6154 6009 2141 63 19 51 chr5 22783266 22783581 -176846569 - AluY SINE Alu -6 305 1 1755 206 39 157 chr5 22783581 22783847 -176846303 - L1PB3 LINE L1 -145 6009 5893 519 49 25 62 chr5 22783847 22783928 -176846222 - MADE1 DNA Mariner -2 78 1 1755 206 39 157 chr5 22783928 22784319 -176845831 - L1PB3 LINE L1 -261 5893 5458 873 291 73 17 chr5 22784326 22784858 -176845292 - L1MEc LINE L1 -2292 3923 3362 1944 100 36 0 chr5 22784861 22785214 -176844936 - L1PA8A LINE L1 -683 5448 5086 * 2655 82 132 7 chr5 22785212 22785615 -176844535 + L1PA8A LINE L1 5669 6121 -10 30 27 0 0 chr5 22785615 22785652 -176844498 + AT_rich Low_complexity Low_complexity 1 37 0 351 0 0 0 chr5 22785652 22785691 -176844459 + (CA)n Simple_repeat Simple_repeat 2 40 0 1271 276 70 37 chr5 22785815 22786195 -176843955 - L1MEc LINE L1 -3177 3038 2672 1141 259 7 20 chr5 22786195 22786500 -176843650 - AluJo SINE Alu 0 302 2 1271 276 70 37 chr5 22786500 22787035 -176843115 - L1MEc LINE L1 -3543 2672 2156 2189 171 18 0 chr5 22787035 22787416 -176842734 - MLT1B LTR MaLR 0 390 3 392 66 0 16 chr5 22787417 22787478 -176842672 + (TA)n Simple_repeat Simple_repeat 2 61 0 1271 276 70 37 chr5 22787478 22787734 -176842416 - L1MEc LINE L1 -4058 2157 1866 1003 208 63 4 chr5 22787741 22788010 -176842140 + L1MA7 LINE L1 6007 6291 0 2065 135 0 3 chr5 22788183 22788494 -176841656 + AluSg SINE Alu 1 310 0 348 351 86 34 chr5 22788570 22788895 -176841255 - L1MEc LINE L1 -5963 433 92 30 89 0 0 chr5 22789149 22789228 -176840922 + AT_rich Low_complexity Low_complexity 1 79 0 45 19 0 0 chr5 22789297 22789349 -176840801 + AT_rich Low_complexity Low_complexity 1 52 0 418 308 84 41 chr5 22789874 22790267 -176839883 + L1M4 LINE L1 3288 3697 -2449 301 270 115 27 chr5 22790331 22790588 -176839562 + L1M4 LINE L1 4802 5078 -1068 33 0 0 0 chr5 22792182 22792215 -176837935 + AT_rich Low_complexity Low_complexity 1 33 0 381 286 16 0 chr5 22792291 22792417 -176837733 + ERVL LTR ERVL 3906 4033 -1731 236 274 94 9 chr5 22792707 22792813 -176837337 + LTR50 LTR ERVL 620 734 -61 248 231 42 28 chr5 22792875 22793018 -176837132 - L1M4 LINE L1 -3856 2290 2146 2986 168 29 20 chr5 22793132 22793641 -176836509 + MLT2B3 LTR ERVL 1 517 -37 589 58 23 0 chr5 22793641 22793727 -176836423 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 2986 168 29 20 chr5 22793727 22793766 -176836384 + MLT2B3 LTR ERVL 517 554 0 392 350 33 47 chr5 22794541 22794841 -176835309 - L2 LINE L2 -151 3162 2867 191 35 0 35 chr5 22794877 22794906 -176835244 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3450 127 14 5 chr5 22794906 22795464 -176834686 - L1PB1 LINE L1 -7 6144 5582 1636 281 45 37 chr5 22795464 22796036 -176834114 + MLT1E LTR MaLR 17 593 0 260 363 38 25 chr5 22797034 22797191 -176832959 - L2 LINE L2 -290 3023 2865 216 296 112 51 chr5 22797804 22798000 -176832150 - MIR SINE MIR -30 232 25 442 332 49 40 chr5 22798310 22798536 -176831614 - MIR SINE MIR -30 232 5 21 36 0 0 chr5 22798543 22798571 -176831579 + AT_rich Low_complexity Low_complexity 1 28 0 31 58 0 0 chr5 22798994 22799046 -176831104 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 22799984 22800006 -176830144 + AT_rich Low_complexity Low_complexity 1 22 0 222 342 107 25 chr5 22803827 22804023 -176826127 + MIR SINE MIR 49 260 -2 430 291 158 0 chr5 22804035 22804238 -176825912 - MIR SINE MIR -16 246 12 477 230 40 6 chr5 22804698 22804835 -176825315 - L1MC4 LINE L1 -810 6975 6848 216 256 26 13 chr5 22805756 22805834 -176824316 + (CTATT)n Simple_repeat Simple_repeat 4 82 0 1498 217 22 22 chr5 22807502 22807866 -176822284 + MLT1A1 LTR MaLR 2 365 0 28 29 0 0 chr5 22809816 22809851 -176820299 + AT_rich Low_complexity Low_complexity 1 35 0 1858 204 22 3 chr5 22810226 22810584 -176819566 + MLT1A1 LTR MaLR 1 365 0 908 308 99 47 chr5 22811153 22811350 -176818800 - L2 LINE L2 -31 3282 3097 443 33 16 0 chr5 22811360 22811421 -176818729 + (TA)n Simple_repeat Simple_repeat 1 62 0 2208 135 0 29 chr5 22811421 22811467 -176818683 + L1PB4 LINE L1 5790 5836 -320 1919 108 0 0 chr5 22811467 22811751 -176818399 + AluSc SINE Alu 21 304 0 2208 135 0 29 chr5 22811751 22812075 -176818075 + L1PB4 LINE L1 5836 6154 -2 908 308 99 47 chr5 22812075 22812091 -176818059 - L2 LINE L2 -216 3097 3083 396 0 0 0 chr5 22812091 22812135 -176818015 + (CA)n Simple_repeat Simple_repeat 2 45 0 908 308 99 47 chr5 22812135 22812609 -176817541 - L2 LINE L2 -230 3083 2568 1969 71 0 97 chr5 22813328 22813675 -176816475 - AluY SINE Alu 0 317 1 212 0 0 35 chr5 22814126 22814155 -176815995 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 2076 139 3 0 chr5 22814158 22814461 -176815689 - AluSq SINE Alu -9 304 1 31 82 0 0 chr5 22814553 22814626 -176815524 + AT_rich Low_complexity Low_complexity 1 73 0 21 0 0 0 chr5 22814933 22814954 -176815196 + AT_rich Low_complexity Low_complexity 1 21 0 1847 125 10 35 chr5 22815660 22815982 -176814168 - AluSx SINE Alu 0 315 1 420 278 25 101 chr5 22816945 22817222 -176812928 - L2 LINE L2 -17 3296 3041 538 157 43 9 chr5 22817268 22817383 -176812767 + L1MB4 LINE L1 6061 6179 -1 5744 219 46 76 chr5 22817400 22818359 -176811791 + L1MC3 LINE L1 5840 6598 -1195 1931 152 152 8 chr5 22818359 22818733 -176811417 - MSTA LTR MaLR 0 428 1 5744 219 46 76 chr5 22818733 22819895 -176810255 + L1MC3 LINE L1 6598 7793 0 24 0 0 0 chr5 22819942 22819966 -176810184 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr5 22820437 22820474 -176809676 + AT_rich Low_complexity Low_complexity 1 37 0 655 258 90 39 chr5 22820557 22820790 -176809360 - L1MCb LINE L1 -5249 796 552 1317 183 15 74 chr5 22820824 22821162 -176808988 - L1MA10 LINE L1 -1 6333 6016 1023 299 60 37 chr5 22821209 22821441 -176808709 - L1MCb LINE L1 -5498 547 322 1998 60 38 88 chr5 22821441 22821759 -176808391 + AluSq SINE Alu 1 302 -11 1023 299 60 37 chr5 22821759 22822061 -176808089 - L1MCb LINE L1 -5723 322 1 562 339 149 45 chr5 22822258 22822928 -176807222 - L1MEc LINE L1 -4552 1984 1093 228 172 0 0 chr5 22823159 22823217 -176806933 + (CA)n Simple_repeat Simple_repeat 2 59 0 270 161 25 37 chr5 22823897 22823911 -176806239 + (TA)n Simple_repeat Simple_repeat 2 15 -66 180 0 0 0 chr5 22823911 22823931 -176806219 + (CA)n Simple_repeat Simple_repeat 2 21 0 270 161 25 37 chr5 22823931 22823997 -176806153 + (TA)n Simple_repeat Simple_repeat 15 81 0 458 68 41 14 chr5 22824171 22824244 -176805906 - MADE1 DNA Mariner 0 80 6 456 274 26 7 chr5 22824465 22824618 -176805532 + L1ME3A LINE L1 6001 6156 -14 279 294 0 12 chr5 22825029 22825114 -176805036 + GA-rich Low_complexity Low_complexity 3 86 0 231 103 0 0 chr5 22825315 22825354 -176804796 + (TG)n Simple_repeat Simple_repeat 2 40 0 26 30 0 0 chr5 22825521 22825554 -176804596 + AT_rich Low_complexity Low_complexity 1 33 0 1763 139 3 52 chr5 22825564 22825688 -176804462 - AluJo SINE Alu -17 295 167 366 23 0 0 chr5 22825688 22825731 -176804419 + (CA)n Simple_repeat Simple_repeat 1 43 0 1763 139 3 52 chr5 22825731 22825915 -176804235 - AluJo SINE Alu -145 167 2 631 144 18 0 chr5 22825925 22826036 -176804114 + L1MB4 LINE L1 6066 6178 -2 22 0 0 0 chr5 22826709 22826731 -176803419 + AT_rich Low_complexity Low_complexity 1 22 0 236 250 14 14 chr5 22828521 22828593 -176801557 + (TA)n Simple_repeat Simple_repeat 2 73 0 333 47 0 0 chr5 22829580 22829623 -176800527 + (TG)n Simple_repeat Simple_repeat 1 43 0 290 282 0 0 chr5 22830706 22830777 -176799373 - L1MEc LINE L1 -4662 1734 1664 1965 120 17 3 chr5 22831255 22831555 -176798595 - AluSc SINE Alu -5 304 1 4966 162 21 14 chr5 22831576 22832716 -176797434 + L1PA15 LINE L1 5005 6148 -17 38 22 0 0 chr5 22832732 22832777 -176797373 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 22833041 22833063 -176797087 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 22834053 22834075 -176796075 + AT_rich Low_complexity Low_complexity 1 22 0 287 275 78 82 chr5 22834176 22834602 -176795548 - L1M4 LINE L1 -1089 5057 4634 3039 183 32 32 chr5 22834940 22835590 -176794560 - MER39B LTR ERV1 -3 650 1 22 0 0 0 chr5 22836330 22836352 -176793798 + AT_rich Low_complexity Low_complexity 1 22 0 37 52 0 0 chr5 22836474 22836532 -176793618 + AT_rich Low_complexity Low_complexity 1 58 0 423 0 0 0 chr5 22836557 22836604 -176793546 + (TG)n Simple_repeat Simple_repeat 2 48 0 10955 246 37 40 chr5 22837076 22838753 -176791397 + L1PA14 LINE L1 2825 4506 -3093 2097 116 3 16 chr5 22838753 22839064 -176791086 + AluSp SINE Alu 1 307 -6 10955 246 37 40 chr5 22839064 22841080 -176789070 + L1PA14 LINE L1 4506 6496 -1103 1773 173 7 3 chr5 22841080 22841375 -176788775 + AluSx SINE Alu 1 296 -16 10955 246 37 40 chr5 22841375 22842471 -176787679 + L1PA14 LINE L1 6496 7594 -5 27 29 0 0 chr5 22842471 22842505 -176787645 + AT_rich Low_complexity Low_complexity 1 34 0 1992 121 3 51 chr5 22842905 22843045 -176787105 + AluSq SINE Alu 3 148 -165 1921 126 36 0 chr5 22843045 22843346 -176786804 + AluSx SINE Alu 1 312 0 1992 121 3 51 chr5 22843346 22843520 -176786630 + AluSq SINE Alu 148 302 -11 300 325 64 32 chr5 22844379 22844536 -176785614 - L2 LINE L2 -531 2783 2622 250 351 98 57 chr5 22844825 22845508 -176784642 - L2 LINE L2 -1646 1668 958 1952 136 9 9 chr5 22846853 22847177 -176782973 + L1PA14 LINE L1 5836 6159 -2 29 28 0 0 chr5 22847212 22847248 -176782902 + AT_rich Low_complexity Low_complexity 1 36 0 543 152 10 0 chr5 22848544 22848643 -176781507 - MLT1C LTR MaLR -367 100 1 415 356 20 0 chr5 22849672 22849818 -176780332 + MIR SINE MIR 102 250 -12 372 282 0 0 chr5 22851473 22851558 -176778592 + L2 LINE L2 2619 2703 -611 260 320 172 34 chr5 22851658 22851949 -176778201 + L2 LINE L2 2891 3221 -92 1018 92 1 6 chr5 22852182 22852355 -176777795 - L1P5 LINE L1 -553 5598 5425 5195 197 42 13 chr5 22852950 22855152 -176774998 - L1MA5 LINE L1 0 6300 4042 534 91 0 0 chr5 22855153 22855230 -176774920 + PABL_B LTR ERV1 591 667 0 717 120 75 8 chr5 22855378 22855511 -176774639 + LTR23 LTR ERV1 1 142 -295 1021 164 96 0 chr5 22855511 22855719 -176774431 + LTR10D-int LTR ERV1 4647 4874 -62 195 266 0 0 chr5 22856256 22856320 -176773830 + (CA)n Simple_repeat Simple_repeat 2 65 0 3652 67 21 18 chr5 22856321 22856832 -176773318 + LTR10D LTR ERV1 1 513 0 183 262 36 48 chr5 22859704 22859788 -176770362 - L2 LINE L2 -6 3266 3184 236 299 143 7 chr5 22859915 22860062 -176770088 + L2 LINE L2 2458 2624 -690 460 308 151 19 chr5 22860120 22860445 -176769705 + L2 LINE L2 2921 3288 -25 22 56 0 0 chr5 22861821 22861857 -176768293 + AT_rich Low_complexity Low_complexity 1 36 0 233 321 12 12 chr5 22863324 22863408 -176766742 - L2 LINE L2 0 3313 3230 295 331 83 0 chr5 22863589 22863722 -176766428 - MIR SINE MIR -118 144 1 1919 141 7 7 chr5 22863728 22864011 -176766139 + AluSx SINE Alu 1 283 -29 2212 133 0 0 chr5 22864980 22865282 -176764868 - AluSx SINE Alu -8 304 3 2222 119 3 0 chr5 22865300 22865603 -176764547 - AluSq SINE Alu -7 306 3 1953 118 35 7 chr5 22865825 22866113 -176764037 + AluSq SINE Alu 3 298 -15 1836 172 0 0 chr5 22866124 22866409 -176763741 + AluJb SINE Alu 1 285 -27 431 254 17 66 chr5 22867174 22867347 -176762803 + MIR SINE MIR 68 225 -37 2186 114 0 3 chr5 22867672 22867980 -176762170 - AluSx SINE Alu -5 307 1 248 238 12 0 chr5 22868224 22868304 -176761846 + L1MB2 LINE L1 3940 4020 -2126 1622 64 0 68 chr5 22868312 22868532 -176761618 - AluY SINE Alu -11 300 96 1236 99 0 0 chr5 22868637 22868799 -176761351 + AluSg/x SINE Alu 139 300 -12 4415 205 7 25 chr5 22868802 22868847 -176761303 + L1MB2 LINE L1 4242 4286 -1885 2307 84 0 0 chr5 22868847 22869134 -176761016 + AluY SINE Alu 1 287 -24 4415 205 7 25 chr5 22869134 22870112 -176760038 + L1MB2 LINE L1 4286 5280 -891 629 208 15 8 chr5 22870112 22870242 -176759908 + FLAM_A SINE Alu 1 131 -2 4415 205 7 25 chr5 22870242 22870254 -176759896 + L1MB2 LINE L1 5280 5291 -880 2318 91 0 3 chr5 22870254 22870552 -176759598 + AluSq SINE Alu 1 297 -16 4415 205 7 25 chr5 22870552 22870623 -176759527 + L1MB2 LINE L1 5291 5362 -809 1189 201 12 115 chr5 22870623 22870776 -176759374 + MLT1A2 LTR MaLR 1 168 -206 1920 115 39 14 chr5 22870776 22871062 -176759088 + AluSx SINE Alu 1 293 -19 1189 201 12 115 chr5 22871062 22871325 -176758825 + MLT1A2 LTR MaLR 168 374 0 4415 205 7 25 chr5 22871325 22871548 -176758602 + L1MB2 LINE L1 5362 5545 -626 238 200 0 0 chr5 22871548 22871603 -176758547 - MSTD LTR MaLR 0 396 342 2210 119 3 0 chr5 22871616 22871919 -176758231 - AluSg SINE Alu -6 304 1 1539 196 25 17 chr5 22871919 22872272 -176757878 - MSTD LTR MaLR -38 358 3 3111 164 25 21 chr5 22872272 22872900 -176757250 + L1MB2 LINE L1 5539 6169 -2 2065 147 13 13 chr5 22873873 22874185 -176755965 + AluSx SINE Alu 1 312 0 1811 135 0 44 chr5 22874359 22874655 -176755495 - AluSx SINE Alu -29 283 1 964 157 0 0 chr5 22874688 22874828 -176755322 + FRAM SINE Alu 6 145 -31 411 21 0 0 chr5 22874843 22874891 -176755259 + (CAT)n Simple_repeat Simple_repeat 2 49 0 1832 132 26 0 chr5 22874891 22875156 -176754994 + AluSx SINE Alu 31 302 -10 2240 116 0 19 chr5 22875158 22875469 -176754681 + AluSp SINE Alu 1 305 -8 615 281 41 0 chr5 22878279 22878525 -176751625 - L1PA12 LINE L1 -5070 2511 2256 252 241 0 0 chr5 22878802 22878860 -176751290 - L1PA12 LINE L1 -5399 2182 2125 2275 113 96 25 chr5 22879216 22879614 -176750536 - MSTA LTR MaLR -2 426 1 1101 223 38 15 chr5 22879658 22879999 -176750151 + L1 LINE L1 4984 5332 -814 667 203 8 0 chr5 22880001 22880119 -176750031 + FLAM_C SINE Alu 5 123 -20 1581 186 7 0 chr5 22880135 22880456 -176749694 + AluJb SINE Alu 1 323 0 849 240 128 23 chr5 22880467 22880597 -176749553 - L1MC/D LINE L1 -749 5397 5282 1477 150 57 43 chr5 22880597 22880897 -176749253 - AluJb SINE Alu -8 304 1 849 240 128 23 chr5 22880897 22881380 -176748770 - L1MC/D LINE L1 -864 5282 4979 1563 161 152 6 chr5 22881406 22881741 -176748409 - MSTA LTR MaLR -44 384 1 2324 113 0 0 chr5 22882377 22882678 -176747472 - AluSc SINE Alu -8 301 1 235 311 104 44 chr5 22883478 22883661 -176746489 - L2 LINE L2 -3 3310 3117 2852 201 13 0 chr5 22884001 22884637 -176745513 + L1 LINE L1 3351 3994 -2152 5306 200 23 12 chr5 22884645 22885762 -176744388 + MSTA-int LTR MaLR 449 1578 -2 1061 146 91 10 chr5 22885764 22886073 -176744077 + MSTA LTR MaLR 1 428 0 24 0 0 0 chr5 22886569 22886593 -176743557 + AT_rich Low_complexity Low_complexity 1 24 0 449 316 157 34 chr5 22887477 22887923 -176742227 - L1MC4a LINE L1 -1789 6019 5519 347 251 72 30 chr5 22887958 22888125 -176742025 - L1MC4a LINE L1 -2379 5429 5256 21 82 0 0 chr5 22888449 22888498 -176741652 + AT_rich Low_complexity Low_complexity 1 49 0 384 111 33 11 chr5 22888701 22888791 -176741359 + (TTAAA)n Simple_repeat Simple_repeat 4 95 0 251 277 27 20 chr5 22888952 22889100 -176741050 + (TA)n Simple_repeat Simple_repeat 2 150 0 188 213 16 0 chr5 22889365 22889426 -176740724 + (TA)n Simple_repeat Simple_repeat 2 63 0 237 288 12 56 chr5 22889490 22889650 -176740500 - L1MC4a LINE L1 -2210 3936 3784 29 47 0 0 chr5 22889968 22890011 -176740139 + AT_rich Low_complexity Low_complexity 1 43 0 209 346 0 0 chr5 22890615 22890693 -176739457 + L2 LINE L2 3191 3268 -4 1079 229 142 30 chr5 22890942 22891581 -176738569 + L1MCa LINE L1 1847 2596 -3947 627 231 0 7 chr5 22891591 22891734 -176738416 + L1MC3 LINE L1 6690 6831 -954 1354 207 4 15 chr5 22891797 22892067 -176738083 + AluJo SINE Alu 33 299 -13 1033 235 65 14 chr5 22892108 22892478 -176737672 + L1MC3 LINE L1 6916 7304 -481 10862 225 34 20 chr5 22892490 22895998 -176734152 + L1PA15 LINE L1 1 3457 -3359 2525 43 0 3 chr5 22895998 22896297 -176733853 + AluY SINE Alu 1 298 -13 10862 225 34 20 chr5 22896297 22896527 -176733623 + L1PA15 LINE L1 3457 3682 -3134 246 49 0 0 chr5 22896527 22896568 -176733582 + Alu SINE Alu 259 299 0 10862 225 34 20 chr5 22896568 22898650 -176731500 + L1PA15 LINE L1 3682 6020 -796 1909 108 6 99 chr5 22898650 22898994 -176731156 - AluSx SINE Alu 0 312 1 10862 225 34 20 chr5 22898994 22899802 -176730348 + L1PA15 LINE L1 6020 6815 -1 424 162 0 0 chr5 22899805 22899873 -176730277 + L1MC3 LINE L1 7292 7359 -426 1006 281 107 28 chr5 22899881 22900321 -176729829 - MLT1D LTR MaLR 0 505 25 1743 181 33 0 chr5 22900321 22900620 -176729530 - AluJb SINE Alu -3 309 1 1006 281 107 28 chr5 22900620 22900646 -176729504 - MLT1D LTR MaLR -480 25 2 1314 215 60 24 chr5 22900650 22901032 -176729118 + L1MC3 LINE L1 7366 7761 -24 25 51 0 0 chr5 22901039 22901078 -176729072 + AT_rich Low_complexity Low_complexity 1 39 0 659 233 22 56 chr5 22901586 22901766 -176728384 - LTR40b LTR ERVL 0 462 289 1213 240 101 59 chr5 22901817 22902238 -176727912 - MLT2B1 LTR ERVL -25 495 50 1870 179 36 0 chr5 22902238 22902574 -176727576 + MER7A DNA MER2_type 1 346 0 1213 240 101 59 chr5 22902574 22902627 -176727523 - MLT2B1 LTR ERVL -470 50 1 758 223 70 9 chr5 22902627 22902842 -176727308 - LTR40a LTR ERVL -291 228 1 34 24 0 0 chr5 22903565 22903606 -176726544 + AT_rich Low_complexity Low_complexity 1 41 0 409 379 35 0 chr5 22903928 22904324 -176725826 - L1ME3A LINE L1 -287 5883 5474 1078 214 4 76 chr5 22904663 22904939 -176725211 + AluJo SINE Alu 1 256 -56 191 86 0 29 chr5 22905041 22905076 -176725074 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 236 91 61 30 chr5 22905238 22905304 -176724846 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 1108 321 124 24 chr5 22905514 22906399 -176723751 - L2 LINE L2 -1 3312 2329 1990 182 8 0 chr5 22906404 22906755 -176723395 - MER47A DNA MER2_type 0 366 13 579 340 89 0 chr5 22906756 22907038 -176723112 - L2 LINE L2 -988 2326 2020 1807 159 44 44 chr5 22907393 22907757 -176722393 - THE1B LTR MaLR 0 364 1 362 228 76 51 chr5 22907917 22908114 -176722036 - L1M4 LINE L1 -1300 4846 4645 538 133 19 19 chr5 22908170 22908275 -176721875 + MER4A LTR ERV1 1 105 -559 231 261 29 14 chr5 22908383 22908452 -176721698 + LTR34 LTR ERV1 626 695 -4 312 330 59 31 chr5 22908518 22908806 -176721344 - L1M4 LINE L1 -1638 4508 4213 729 153 0 8 chr5 22908913 22909037 -176721113 + L1M2 LINE L1 5495 5617 -695 22 56 0 0 chr5 22909293 22909329 -176720821 + AT_rich Low_complexity Low_complexity 1 36 0 718 229 0 0 chr5 22910230 22910370 -176719780 - AluJb SINE Alu -14 298 159 1988 119 6 38 chr5 22912135 22912453 -176717697 + AluSc SINE Alu 1 308 -1 201 215 31 0 chr5 22912485 22912550 -176717600 + (TTTA)n Simple_repeat Simple_repeat 3 69 0 2368 212 63 49 chr5 22912648 22913430 -176716720 - L1 LINE L1 -893 5253 4461 * 2511 171 60 105 chr5 22913426 22914140 -176716010 + L1MA9 LINE L1 5296 5977 -335 1509 244 63 6 chr5 22914156 22914521 -176715629 + MSTD LTR MaLR 11 396 0 1199 201 31 20 chr5 22914521 22914814 -176715336 + L1MA9 LINE L1 5979 6274 -38 241 305 42 84 chr5 22914919 22915158 -176714992 + MLT1H1 LTR MaLR 324 552 -3 1174 205 23 91 chr5 22915924 22916309 -176713841 + MLT1A1 LTR MaLR 4 362 -3 746 223 201 32 chr5 22917124 22917193 -176712957 - MLT1E1 LTR MaLR 0 654 598 1147 203 60 100 chr5 22917193 22917662 -176712488 + LTR7 LTR ERV1 1 450 0 746 223 201 32 chr5 22917662 22917928 -176712222 - MLT1E1 LTR MaLR -56 598 205 382 238 79 0 chr5 22917937 22918038 -176712112 + MLT1E1 LTR MaLR 83 191 -463 21 0 0 0 chr5 22918156 22918177 -176711973 + AT_rich Low_complexity Low_complexity 1 21 0 1429 209 66 123 chr5 22918403 22919174 -176710976 - LTR8A LTR ERV1 0 727 1 207 0 0 0 chr5 22919394 22919417 -176710733 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1618 156 26 7 chr5 22919419 22919689 -176710461 - AluSx SINE Alu -36 276 2 766 274 15 15 chr5 22919806 22920010 -176710140 - MER82 DNA MER2_type -2 651 448 3800 45 31 0 chr5 22920656 22921142 -176709008 - L1PA3 LINE L1 -3 6152 5652 21 0 0 0 chr5 22921481 22921502 -176708648 + AT_rich Low_complexity Low_complexity 1 21 0 2219 99 7 0 chr5 22921690 22921993 -176708157 - AluSp SINE Alu -8 305 1 227 355 16 48 chr5 22922508 22922632 -176707518 + LTR33 LTR ERVL 40 159 -362 317 296 17 26 chr5 22922745 22922860 -176707290 + LTR33 LTR ERVL 333 446 -75 2055 74 32 11 chr5 22922911 22923196 -176706954 + AluY SINE Alu 1 291 -20 213 94 0 0 chr5 22923972 22924004 -176706146 + (CA)n Simple_repeat Simple_repeat 2 33 0 1066 211 13 0 chr5 22924427 22924655 -176705495 - L1MB2 LINE L1 -7 6164 5934 440 123 27 0 chr5 22924663 22924736 -176705414 + L1M4 LINE L1 5705 5779 -395 207 0 0 0 chr5 22925034 22925057 -176705093 + (CATG)n Simple_repeat Simple_repeat 4 26 0 1841 150 122 18 chr5 22925991 22926377 -176703773 + MSTA LTR MaLR 1 426 -2 556 343 25 21 chr5 22926690 22926976 -176703174 + MLT1J LTR MaLR 1 287 -224 405 160 13 0 chr5 22927644 22927719 -176702431 + MADE1 DNA Mariner 1 76 -4 26 30 0 0 chr5 22927759 22927792 -176702358 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 22929951 22929980 -176700170 + AT_rich Low_complexity Low_complexity 1 29 0 776 228 18 41 chr5 22930526 22930745 -176699405 - MER20 DNA MER1_type 0 219 6 1307 268 59 60 chr5 22930864 22931948 -176698202 - L1ME3A LINE L1 -4 6664 4862 576 256 52 24 chr5 22931945 22932234 -176697916 - L1ME3A LINE L1 -2978 3666 3370 * 671 261 90 8 chr5 22933246 22933480 -176696670 - L1MB5 LINE L1 -8 6166 5914 673 111 0 10 chr5 22933480 22933579 -176696571 + MER4A LTR ERV1 1 98 -566 1403 145 63 29 chr5 22933579 22933913 -176696237 + MER4A LTR ERV1 261 664 0 1083 185 83 62 chr5 22933913 22934237 -176695913 - L1MB5 LINE L1 -263 5911 5581 1694 284 98 59 chr5 22934263 22935402 -176694748 - L1ME3A LINE L1 -5353 1189 7 200 200 0 22 chr5 22935691 22935736 -176694414 + (CA)n Simple_repeat Simple_repeat 2 45 0 1936 208 12 12 chr5 22936553 22936667 -176693483 - MER57A LTR ERV1 0 403 290 3902 136 9 3 chr5 22936667 22937298 -176692852 + MER41B LTR ERV1 1 635 0 1936 208 12 12 chr5 22937298 22937586 -176692564 - MER57A LTR ERV1 -112 291 1 2569 208 103 33 chr5 22937799 22938530 -176691620 - LTR48 LTR ERV1 -5 782 1 626 226 56 58 chr5 22938698 22938975 -176691175 + MLT1G1 LTR MaLR 11 318 -277 538 254 43 0 chr5 22938988 22939139 -176691011 + MLT1G1 LTR MaLR 426 595 0 1224 93 6 0 chr5 22940442 22940603 -176689547 - AluSg/x SINE Alu -14 296 135 263 311 0 0 chr5 22940604 22940707 -176689443 - L1MA10 LINE L1 -63 6271 6169 2121 107 10 3 chr5 22940801 22941101 -176689049 - AluSg SINE Alu -8 302 1 779 206 29 75 chr5 22941155 22941467 -176688683 - L1MB5 LINE L1 -687 5483 5186 1569 122 59 105 chr5 22941485 22941526 -176688624 - THE1C LTR MaLR 0 375 334 2074 128 3 3 chr5 22941526 22941838 -176688312 + AluSx SINE Alu 1 312 0 1569 122 59 105 chr5 22941838 22942188 -176687962 - THE1C LTR MaLR -41 334 2 1563 259 38 79 chr5 22942387 22942784 -176687366 - L1MB5 LINE L1 -1979 4167 3755 2129 107 10 10 chr5 22942784 22943093 -176687057 - AluSc SINE Alu 0 309 1 1563 259 38 79 chr5 22943093 22943363 -176686787 - L1MB5 LINE L1 -2391 3755 3534 240 35 0 0 chr5 22943363 22943392 -176686758 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1563 259 38 79 chr5 22943392 22943508 -176686642 - L1MB5 LINE L1 -2612 3534 3415 504 335 30 15 chr5 22943968 22944171 -176685979 + HERVL LTR ERVL 4117 4322 -1332 198 103 0 0 chr5 22944352 22944381 -176685769 + (CA)n Simple_repeat Simple_repeat 2 30 0 723 368 42 17 chr5 22945308 22945718 -176684432 + LTR16A LTR ERVL 18 437 -13 2239 239 29 63 chr5 22946207 22946892 -176683258 - LTR8 LTR ERV1 0 691 30 21 36 0 0 chr5 22947108 22947136 -176683014 + AT_rich Low_complexity Low_complexity 1 28 0 6042 162 63 8 chr5 22948179 22949346 -176680804 - Tigger3b DNA MER2_type 0 1231 1 546 339 9 14 chr5 22949346 22949565 -176680585 - LTR16A LTR ERVL -147 303 86 2489 54 30 0 chr5 22949877 22950175 -176679975 - AluY SINE Alu -4 307 1 215 182 0 36 chr5 22950361 22950416 -176679734 + A-rich Low_complexity Low_complexity 2 54 0 1599 265 100 21 chr5 22950768 22951297 -176678853 + MLT1E2 LTR MaLR 56 626 0 27 0 0 0 chr5 22951632 22951659 -176678491 + AT_rich Low_complexity Low_complexity 1 27 0 729 190 110 112 chr5 22952110 22952537 -176677613 + L1MC4 LINE L1 7614 8039 -3 189 0 0 0 chr5 22952815 22952836 -176677314 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3543 83 16 16 chr5 22952837 22953341 -176676809 - L1PA7 LINE L1 -13 6141 5638 3857 62 10 2 chr5 22954525 22955023 -176675127 - L1PA5 LINE L1 -2 6152 5651 915 56 8 8 chr5 22955023 22955149 -176675001 + L1P LINE L1 4464 4589 -1557 248 229 0 0 chr5 22955466 22955514 -176674636 - L1PA12 LINE L1 -7526 55 8 2262 116 0 0 chr5 22955599 22955901 -176674249 + AluSx SINE Alu 1 302 -10 1146 97 11 28 chr5 22958631 22958807 -176671343 + AluY SINE Alu 1 173 -138 946 99 0 0 chr5 22958903 22959034 -176671116 + AluY SINE Alu 173 303 -8 646 130 0 0 chr5 22960224 22960324 -176669826 - L1P4 LINE L1 -632 5534 5435 5083 211 184 23 chr5 22960324 22961606 -176668544 + MER52A LTR ERV1 1 1488 -267 2408 43 7 10 chr5 22961746 22962050 -176668100 + AluY SINE Alu 5 307 -4 180 0 0 0 chr5 22962087 22962107 -176668043 + (CAA)n Simple_repeat Simple_repeat 2 21 0 258 317 16 24 chr5 22964800 22964923 -176665227 + L1ME LINE L1 290 411 -5659 516 215 8 8 chr5 22965445 22965566 -176664584 + MSTB-int LTR MaLR 1530 1650 -1 1551 241 66 3 chr5 22965567 22965948 -176664202 + MSTB LTR MaLR 1 405 -21 246 319 32 0 chr5 22966384 22966478 -176663672 - HAL1b LINE L1 -975 373 277 2100 129 3 7 chr5 22966820 22967130 -176663020 - AluSq SINE Alu 0 313 5 3755 117 28 3 chr5 22967384 22967949 -176662201 - LTR19B LTR ERV1 -1 579 1 297 208 0 0 chr5 22968497 22968569 -176661581 + (TA)n Simple_repeat Simple_repeat 2 73 0 325 287 0 0 chr5 22968572 22968659 -176661491 + L1MC4 LINE L1 6615 6701 -1341 * 338 293 40 10 chr5 22968581 22968680 -176661470 - L1MC4 LINE L1 -1337 6705 6604 22 0 0 0 chr5 22968855 22968877 -176661273 + AT_rich Low_complexity Low_complexity 1 22 0 1536 113 14 102 chr5 22969018 22969301 -176660849 - AluSx SINE Alu -25 287 30 1140 187 4 41 chr5 22969939 22970206 -176659944 - pTR5 LTR ERV1 -1441 997 741 733 25 50 118 chr5 22970412 22970531 -176659619 - HERVK14 LTR ERVK 0 5945 5835 326 191 0 20 chr5 22970531 22970601 -176659549 - MER41C LTR ERV1 -493 61 6 3460 53 6 4 chr5 22970601 22971279 -176658871 - HERVK3 LTR ERVK -181 5764 5013 678 108 0 0 chr5 22971278 22971371 -176658779 - HERVK3 LTR ERVK -1545 4400 4308 * 288 91 254 0 chr5 22971589 22971644 -176658506 - HERVK3 LTR ERVK -7025 218 150 200 203 27 54 chr5 22971651 22971725 -176658425 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 3225 101 37 0 chr5 22972388 22972843 -176657307 - HERVK3 LTR ERVK -3769 2176 1705 5397 70 1 10 chr5 22972877 22973582 -176656568 - HERVK3 LTR ERVK -5246 699 1 2107 99 84 51 chr5 22973582 22973981 -176656169 - LTR14B LTR ERVK 0 608 3 1364 66 61 20 chr5 22974545 22974741 -176655409 - AluY SINE Alu 0 311 108 471 274 116 4 chr5 22975610 22975851 -176654299 + L1PA16 LINE L1 8 275 -7306 4066 141 21 20 chr5 22975853 22976562 -176653588 - MER50 LTR ERV1 -24 710 1 246 311 94 80 chr5 22976562 22977127 -176653023 + L1PA16 LINE L1 272 844 -6737 * 819 291 35 43 chr5 22977114 22977482 -176652668 + L1PA16 LINE L1 1817 2181 -5400 4278 240 34 43 chr5 22977667 22979863 -176650287 + L1PA16 LINE L1 2318 4531 -3053 4300 170 56 49 chr5 22979886 22980919 -176649231 + L1PA16 LINE L1 6185 7223 -381 293 49 49 16 chr5 22980919 22980980 -176649170 + (TA)n Simple_repeat Simple_repeat 1 63 0 4300 170 56 49 chr5 22980980 22981359 -176648791 + L1PA16 LINE L1 7223 7598 -6 1828 181 18 64 chr5 22983154 22983607 -176646543 + MER31A LTR ERV1 1 432 -53 23 33 0 0 chr5 22984108 22984138 -176646012 + AT_rich Low_complexity Low_complexity 1 30 0 35 98 0 0 chr5 22984252 22984364 -176645786 + AT_rich Low_complexity Low_complexity 1 112 0 1942 129 16 13 chr5 22984617 22984926 -176645224 - AluSx SINE Alu -2 310 1 2151 117 0 3 chr5 22984979 22985277 -176644873 - AluSg SINE Alu -13 297 1 545 274 55 92 chr5 22985609 22985989 -176644161 + L2 LINE L2 2945 3310 -3 924 190 11 17 chr5 22987713 22987892 -176642258 + MER52A LTR ERV1 1578 1755 0 3379 193 38 22 chr5 22987892 22988797 -176641353 - L1P4 LINE L1 -728 5438 4533 3011 161 72 2 chr5 22988798 22989368 -176640782 + L1PA16 LINE L1 5547 6156 -10 414 100 0 0 chr5 22989368 22989428 -176640722 + (TA)n Simple_repeat Simple_repeat 1 60 0 238 155 10 117 chr5 22989447 22989506 -176640644 + L1MA8 LINE L1 6180 6225 -66 2175 110 0 10 chr5 22989506 22989807 -176640343 + AluSx SINE Alu 1 298 -14 238 155 10 117 chr5 22989807 22989850 -176640300 + L1MA8 LINE L1 6225 6271 -20 28 0 0 0 chr5 22989867 22989895 -176640255 + AT_rich Low_complexity Low_complexity 1 28 0 614 316 10 0 chr5 22990642 22990851 -176639299 + L1MEc LINE L1 112 322 -6074 1065 193 24 58 chr5 22990862 22991157 -176638993 + L1MEc LINE L1 646 930 -5466 782 298 114 19 chr5 22991253 22991935 -176638215 + L1MEc LINE L1 1115 1861 -4535 483 295 73 91 chr5 22992307 22992868 -176637282 - L2 LINE L2 -67 3246 2687 440 329 20 63 chr5 22992973 22993225 -176636925 - LTR33 LTR ERVL -280 241 1 185 356 69 0 chr5 22993226 22993313 -176636837 + L2 LINE L2 3186 3278 -35 210 363 0 0 chr5 22993630 22993710 -176636440 + L2 LINE L2 3226 3305 -8 2494 44 0 0 chr5 22993777 22994072 -176636078 + AluY SINE Alu 1 295 -16 28 29 0 0 chr5 22994846 22994881 -176635269 + AT_rich Low_complexity Low_complexity 1 35 0 30 59 0 0 chr5 22995791 22995842 -176634308 + AT_rich Low_complexity Low_complexity 1 51 0 374 318 71 6 chr5 22995869 22996039 -176634111 - MIR SINE MIR -74 188 8 1536 121 45 28 chr5 22996919 22997209 -176632941 - L1PA11 LINE L1 0 6174 5880 470 81 0 0 chr5 22997209 22997271 -176632879 + L1P4 LINE L1 5586 5647 -527 744 267 180 66 chr5 22997477 22997904 -176632246 + MLT2F LTR ERVL 186 661 -2 26 50 0 0 chr5 22998652 22998692 -176631458 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr5 22998909 22998940 -176631210 + AT_rich Low_complexity Low_complexity 1 31 0 2056 134 7 3 chr5 22999519 22999824 -176630326 - AluSg SINE Alu -4 306 1 21 82 0 0 chr5 23000174 23000223 -176629927 + AT_rich Low_complexity Low_complexity 1 49 0 387 296 195 6 chr5 23000350 23000509 -176629641 - MER5A DNA MER1_type 0 189 1 360 231 44 0 chr5 23000630 23000721 -176629429 - MIR SINE MIR -57 205 111 257 288 0 0 chr5 23001734 23001807 -176628343 + L1MDa LINE L1 70 142 -6398 2460 42 13 7 chr5 23001918 23002227 -176627923 - AluY SINE Alu 0 311 1 186 43 0 0 chr5 23002307 23002330 -176627820 + (GA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr5 23002755 23002777 -176627373 + AT_rich Low_complexity Low_complexity 1 22 0 1774 135 54 14 chr5 23002955 23003252 -176626898 - AluSg SINE Alu -1 309 1 24 0 0 0 chr5 23003553 23003577 -176626573 + AT_rich Low_complexity Low_complexity 1 24 0 661 285 0 22 chr5 23003756 23003935 -176626215 + MIR SINE MIR 32 206 -56 520 231 240 4 chr5 23004152 23004194 -176625956 - MLT1E1 LTR MaLR -5 649 618 195 42 0 0 chr5 23004194 23004218 -176625932 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 520 231 240 4 chr5 23004218 23004525 -176625625 - MLT1E1 LTR MaLR -36 618 178 304 235 94 0 chr5 23004552 23004637 -176625513 - MLT1E1 LTR MaLR -557 97 5 992 258 79 170 chr5 23004669 23005823 -176624327 - MLT1E1-int LTR MaLR -30 1341 293 307 293 57 13 chr5 23005828 23005985 -176624165 - MLT1E1-int LTR MaLR -1207 164 1 766 327 8 4 chr5 23005996 23006259 -176623891 - MLT1E1 LTR MaLR -8 646 383 703 286 73 8 chr5 23006309 23006554 -176623596 - MLT1E1 LTR MaLR -393 261 1 478 273 121 0 chr5 23006828 23006993 -176623157 + L1ME3A LINE L1 5651 5835 -335 661 153 32 8 chr5 23007411 23007535 -176622615 - LTR54B LTR ERV1 -371 127 1 5378 228 31 21 chr5 23007541 23008843 -176621307 - MER57-int LTR ERV1 -400 7137 5824 763 184 68 21 chr5 23009162 23009352 -176620798 - MER57-int LTR ERV1 -1717 5820 5622 23 33 0 0 chr5 23011117 23011147 -176619003 + AT_rich Low_complexity Low_complexity 1 30 0 292 317 88 19 chr5 23011496 23011701 -176618449 + L2 LINE L2 2944 3162 -151 407 319 39 48 chr5 23012203 23012432 -176617718 + MIR SINE MIR 8 234 -28 23 68 0 0 chr5 23012499 23012543 -176617607 + AT_rich Low_complexity Low_complexity 1 44 0 1710 118 24 0 chr5 23012630 23012876 -176617274 + AluSg SINE Alu 5 256 -54 213 39 0 0 chr5 23012876 23012902 -176617248 + (A)n Simple_repeat Simple_repeat 1 26 0 268 356 55 12 chr5 23013641 23013804 -176616346 + MIR SINE MIR 49 218 -44 25 0 0 0 chr5 23014556 23014581 -176615569 + AT_rich Low_complexity Low_complexity 1 25 0 181 288 30 0 chr5 23014641 23014707 -176615443 - MIR SINE MIR -121 141 74 2046 127 7 0 chr5 23016005 23016313 -176613837 + AluSg SINE Alu 1 310 0 192 111 0 0 chr5 23016573 23016609 -176613541 + (CA)n Simple_repeat Simple_repeat 2 37 0 323 250 134 58 chr5 23016899 23017071 -176613079 - L2 LINE L2 0 3313 3129 844 206 0 7 chr5 23017072 23017227 -176612923 - MLT1B LTR MaLR -1 389 236 2276 197 58 4 chr5 23017229 23017712 -176612438 + LTR22 LTR ERVK 1 509 0 1063 197 75 0 chr5 23017712 23017933 -176612217 - MLT1B LTR MaLR -150 240 3 201 370 49 0 chr5 23018182 23018263 -176611887 - L2 LINE L2 -297 3016 2932 189 0 0 0 chr5 23019326 23019347 -176610803 + (TA)n Simple_repeat Simple_repeat 1 21 0 1140 225 126 30 chr5 23020820 23021153 -176608997 + MLT1A1 LTR MaLR 1 365 0 2530 123 0 3 chr5 23021978 23022343 -176607807 - THE1B LTR MaLR 0 364 1 3825 140 102 25 chr5 23022591 23023652 -176606498 - pTR5 LTR ERV1 0 2606 1524 1282 281 133 8 chr5 23025280 23025793 -176604357 + MER119 DNA MER1_type 7 583 0 235 335 129 31 chr5 23025793 23025987 -176604163 + MIR SINE MIR 24 236 -26 30 83 0 0 chr5 23026539 23026611 -176603539 + AT_rich Low_complexity Low_complexity 1 72 0 31 26 0 0 chr5 23027455 23027493 -176602657 + AT_rich Low_complexity Low_complexity 1 38 0 2009 151 0 0 chr5 23027542 23027847 -176602303 - AluSx SINE Alu -7 305 1 525 280 89 48 chr5 23028003 23028274 -176601876 + L1MD2 LINE L1 5860 6141 -218 302 343 22 14 chr5 23028283 23028429 -176601721 + L1MC4a LINE L1 6202 7807 -1 27 49 0 0 chr5 23029037 23029078 -176601072 + AT_rich Low_complexity Low_complexity 1 41 0 2262 93 0 0 chr5 23029124 23029415 -176600735 + AluSg SINE Alu 1 291 -19 21 36 0 0 chr5 23029429 23029457 -176600693 + AT_rich Low_complexity Low_complexity 1 28 0 207 205 39 13 chr5 23029995 23030073 -176600077 + (TA)n Simple_repeat Simple_repeat 2 81 0 2300 59 10 3 chr5 23030202 23030490 -176599660 + AluY SINE Alu 3 292 -19 699 230 40 50 chr5 23030964 23031164 -176598986 + MER49 LTR ERV1 1 198 -725 252 297 11 0 chr5 23031170 23031261 -176598889 - L1MC4 LINE L1 -1339 6703 6612 234 205 84 12 chr5 23031191 23031274 -176598876 + L1MC4 LINE L1 6615 6703 -1339 * 378 177 0 13 chr5 23031284 23031363 -176598787 + MER49 LTR ERV1 185 262 -661 1208 274 20 15 chr5 23031404 23031747 -176598403 + MER4D LTR ERV1 549 893 -10 2083 149 0 0 chr5 23032699 23033042 -176597108 - AluSx SINE Alu 0 312 4 247 321 9 18 chr5 23033296 23033405 -176596745 - MER34 LTR ERV1 -3 539 432 211 229 0 0 chr5 23034067 23034115 -176596035 + (TA)n Simple_repeat Simple_repeat 1 48 0 304 299 65 60 chr5 23034504 23034688 -176595462 + L1MEd LINE L1 1011 1195 -4924 269 301 27 75 chr5 23034941 23035127 -176595023 - L2 LINE L2 -25 3288 3112 1387 201 28 45 chr5 23035309 23035662 -176594488 - MLT1A1 LTR MaLR -15 350 4 674 284 111 24 chr5 23035663 23036004 -176594146 + MLT1G LTR MaLR 136 506 -84 236 303 0 0 chr5 23036614 23036680 -176593470 + HAL1b LINE L1 421 486 -862 525 140 11 5 chr5 23036783 23036874 -176593276 + MSTB LTR MaLR 2 82 -344 496 196 20 10 chr5 23036882 23036984 -176593166 + L1PB4 LINE L1 5687 5789 -367 232 186 0 0 chr5 23036990 23037033 -176593117 + L1MC4 LINE L1 6658 6700 -1342 301 283 18 26 chr5 23037054 23037167 -176592983 - L1MC4 LINE L1 -1339 6703 6592 672 111 16 47 chr5 23037197 23037455 -176592695 + (TA)n Simple_repeat Simple_repeat 1 249 0 251 209 0 50 chr5 23037482 23037621 -176592529 + (TA)n Simple_repeat Simple_repeat 1 132 0 1874 162 11 35 chr5 23037630 23038006 -176592144 + L1PB4 LINE L1 5789 6155 -1 274 275 0 0 chr5 23038023 23038109 -176592041 + L1MEd LINE L1 2672 2757 -3372 225 0 0 0 chr5 23038960 23038985 -176591165 + (A)n Simple_repeat Simple_repeat 1 25 0 261 98 0 0 chr5 23040274 23040315 -176589835 + (TG)n Simple_repeat Simple_repeat 2 42 0 5081 36 0 3 chr5 23040415 23041028 -176589122 + L1PA4 LINE L1 5545 6155 0 231 180 11 22 chr5 23041380 23041469 -176588681 + (TA)n Simple_repeat Simple_repeat 2 89 0 291 336 135 45 chr5 23041534 23041846 -176588304 - L2 LINE L2 -421 2893 2554 2065 115 54 0 chr5 23041901 23042196 -176587954 + AluSq SINE Alu 1 311 -2 293 211 87 124 chr5 23042631 23042792 -176587358 + MIR SINE MIR 18 172 -90 282 125 0 0 chr5 23042831 23042879 -176587271 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 357 82 0 0 chr5 23042880 23042929 -176587221 + (TAGG)n Simple_repeat Simple_repeat 2 50 0 251 200 50 0 chr5 23043840 23043900 -176586250 + CT-rich Low_complexity Low_complexity 1 63 0 656 177 7 0 chr5 23044091 23044232 -176585918 + (TAGA)n Simple_repeat Simple_repeat 1 142 0 380 381 122 17 chr5 23044248 23044473 -176585677 + L2 LINE L2 2728 2928 -385 2527 123 0 18 chr5 23044473 23044855 -176585295 + THE1C LTR MaLR 1 375 0 380 381 122 17 chr5 23044855 23045157 -176584993 + L2 LINE L2 2928 3305 -8 562 185 0 0 chr5 23045341 23045449 -176584701 - L1MA3 LINE L1 0 6305 6198 1966 125 14 54 chr5 23045449 23045802 -176584348 + THE1B LTR MaLR 1 339 -25 267 152 0 0 chr5 23045841 23045887 -176584263 + (TA)n Simple_repeat Simple_repeat 1 46 0 10419 64 1 1 chr5 23045887 23048235 -176581915 - L1PA6 LINE L1 -15 6139 3793 5042 90 4 6 chr5 23048226 23049365 -176580785 - L1PA6 LINE L1 -2741 3405 2367 * 6834 79 3 8 chr5 23049430 23050369 -176579781 + L1P LINE L1 1536 2470 -3676 274 149 0 15 chr5 23050369 23050423 -176579727 + THE1A LTR MaLR 317 355 0 3624 88 8 4 chr5 23050423 23050925 -176579225 + THE1A-int LTR MaLR 1 504 -1076 1566 179 7 27 chr5 23051107 23051322 -176578828 + AluJb SINE Alu 1 210 -102 1893 117 4 0 chr5 23051322 23051596 -176578554 - AluY SINE Alu -36 275 1 1566 179 7 27 chr5 23051596 23051677 -176578473 + AluJb SINE Alu 210 291 -21 1432 247 87 30 chr5 23051821 23052291 -176577859 - MLT1D LTR MaLR 0 505 9 2165 182 52 28 chr5 23052468 23052934 -176577216 - L1MC1 LINE L1 -4 6329 5853 239 386 82 22 chr5 23053062 23053246 -176576904 + L2 LINE L2 1169 1363 -1951 196 330 88 11 chr5 23053396 23053487 -176576663 + L2 LINE L2 1609 1706 -1608 565 349 64 35 chr5 23053627 23054140 -176576010 + L2 LINE L2 1928 2455 -859 213 304 111 22 chr5 23054139 23054274 -176575876 - MIR SINE MIR -24 238 92 * 257 329 84 17 chr5 23054331 23054568 -176575582 - MARNA DNA Mariner -31 555 303 838 188 12 24 chr5 23054621 23054811 -176575339 + AluJo SINE Alu 120 307 0 206 349 81 15 chr5 23055497 23055695 -176574455 - MIR SINE MIR 0 262 52 22 0 0 0 chr5 23056070 23056092 -176574058 + AT_rich Low_complexity Low_complexity 1 22 0 223 333 40 0 chr5 23056707 23056782 -176573368 + L2 LINE L2 3224 3301 -12 24 0 0 0 chr5 23056904 23056928 -176573222 + AT_rich Low_complexity Low_complexity 1 24 0 1560 240 57 14 chr5 23056986 23057423 -176572727 - MER31B LTR ERV1 -10 456 1 21 36 0 0 chr5 23057782 23057810 -176572340 + AT_rich Low_complexity Low_complexity 1 28 0 293 311 27 40 chr5 23058867 23059015 -176571135 + L1MC5 LINE L1 7720 7865 -96 23 54 0 0 chr5 23059053 23059090 -176571060 + AT_rich Low_complexity Low_complexity 1 37 0 641 194 8 0 chr5 23059098 23059227 -176570923 - MER39B LTR ERV1 -382 271 142 3738 189 20 33 chr5 23059228 23060103 -176570047 - L1MA4 LINE L1 -225 7494 6623 3179 224 40 4 chr5 23060100 23060931 -176569219 - L1MA4 LINE L1 -2481 5084 4224 * 334 127 16 16 chr5 23060929 23060992 -176569158 - L1MA4 LINE L1 -4185 3380 3318 * 277 130 19 0 chr5 23060994 23061048 -176569102 + L1M1 LINE L1 3303 3357 -4208 6878 245 56 83 chr5 23061073 23061723 -176568427 - L1MA4 LINE L1 -4272 3293 2627 2858 6 0 3 chr5 23061723 23062042 -176568108 - AluYb8 SINE Alu 0 318 1 6878 245 56 83 chr5 23062042 23064312 -176565838 - L1MA4 LINE L1 -4938 2627 13 199 243 40 40 chr5 23064402 23064476 -176565674 + L2 LINE L2 3178 3251 -21 27 29 0 0 chr5 23064477 23064511 -176565639 + AT_rich Low_complexity Low_complexity 1 34 0 605 295 90 33 chr5 23064728 23065060 -176565090 - L2 LINE L2 -103 3210 2860 989 181 67 122 chr5 23065513 23065873 -176564277 + MER2 DNA MER2_type 4 343 -1 1694 243 99 11 chr5 23066151 23066625 -176563525 + L1ME1 LINE L1 5559 6074 -92 28 48 0 0 chr5 23067250 23067292 -176562858 + AT_rich Low_complexity Low_complexity 1 42 0 1681 262 30 19 chr5 23067786 23068251 -176561899 + MER70A LTR ERVL 1 470 -2 849 87 0 0 chr5 23068845 23068960 -176561190 - L1MA3 LINE L1 -11 6294 6180 255 31 0 0 chr5 23069137 23069169 -176560981 + (TGG)n Simple_repeat Simple_repeat 2 33 0 499 328 81 39 chr5 23069258 23069615 -176560535 - LTR16C LTR ERVL -56 435 64 1185 255 57 20 chr5 23069632 23069981 -176560169 - MLT1A2 LTR MaLR -2 372 11 343 289 18 18 chr5 23070037 23070151 -176559999 - MIR SINE MIR -76 186 73 1202 215 54 4 chr5 23070594 23070854 -176559296 + L1M1 LINE L1 15 287 -7278 437 202 0 0 chr5 23070847 23070936 -176559214 + L1M1 LINE L1 768 856 -6709 * 1663 143 24 57 chr5 23070941 23071277 -176558873 - THE1B LTR MaLR -35 329 5 7215 118 25 7 chr5 23071279 23072341 -176557809 - THE1B-int LTR MaLR 0 1580 499 5550 64 5 0 chr5 23072447 23073446 -176556704 + L1P2 LINE L1 4646 5649 -505 1574 161 0 0 chr5 23073586 23073829 -176556321 - AluSq SINE Alu -70 243 1 367 316 128 26 chr5 23073868 23074219 -176555931 - L1M4 LINE L1 -3613 2533 2147 200 108 0 27 chr5 23074312 23074349 -176555801 + (GA)n Simple_repeat Simple_repeat 1 36 0 29 28 0 0 chr5 23074565 23074601 -176555549 + AT_rich Low_complexity Low_complexity 1 36 0 2041 96 0 0 chr5 23074603 23074884 -176555266 - L1PA14 LINE L1 -14 6147 5867 1810 164 0 3 chr5 23075056 23075348 -176554802 - AluJb SINE Alu -15 297 7 246 313 90 22 chr5 23076010 23076144 -176554006 + MIR SINE MIR 64 206 -56 264 143 43 0 chr5 23077020 23077090 -176553060 + (TA)n Simple_repeat Simple_repeat 1 73 0 222 91 0 0 chr5 23077091 23077124 -176553026 + (TG)n Simple_repeat Simple_repeat 2 34 0 1485 276 103 43 chr5 23077457 23078201 -176551949 + LTR50 LTR ERVL 1 789 -6 1988 95 0 0 chr5 23078607 23078869 -176551281 + AluSc SINE Alu 31 292 -17 522 258 66 20 chr5 23080694 23080892 -176549258 + MER3 DNA MER1_type 3 209 0 1319 224 31 14 chr5 23081000 23081286 -176548864 - AluJb SINE Alu -9 303 13 346 94 31 0 chr5 23081413 23081477 -176548673 + GA-rich Low_complexity Low_complexity 3 68 0 873 214 143 43 chr5 23081648 23081961 -176548189 + MLT1A2 LTR MaLR 27 467 0 23 0 0 0 chr5 23083208 23083231 -176546919 + AT_rich Low_complexity Low_complexity 1 23 0 2035 111 14 7 chr5 23083699 23083987 -176546163 + AluSx SINE Alu 3 292 -20 243 61 0 0 chr5 23084303 23084336 -176545814 + (TG)n Simple_repeat Simple_repeat 2 34 0 326 338 90 23 chr5 23085665 23085931 -176544219 + HAL1 LINE L1 1368 1651 -856 1091 197 90 79 chr5 23086128 23086484 -176543666 - MLT1A1 LTR MaLR -5 360 1 7561 138 49 34 chr5 23086535 23087844 -176542306 - THE1-int LTR MaLR -85 1495 168 3948 188 79 22 chr5 23087847 23088847 -176541303 - MLT1A1-int LTR MaLR -295 1356 180 694 184 8 0 chr5 23088848 23088973 -176541177 + THE1C LTR MaLR 250 375 0 21 82 0 0 chr5 23089939 23089988 -176540162 + AT_rich Low_complexity Low_complexity 1 49 0 1631 240 32 38 chr5 23090438 23090969 -176539181 - L1MA9 LINE L1 -38 6274 5746 720 200 73 0 chr5 23091077 23091242 -176538908 - L1MA9 LINE L1 -541 5771 5595 230 0 33 0 chr5 23091242 23091272 -176538878 + (TTA)n Simple_repeat Simple_repeat 3 33 0 304 133 0 0 chr5 23091272 23091317 -176538833 - L1PA4 LINE L1 -18 6137 6093 672 13 0 0 chr5 23091317 23091395 -176538755 + L1P2 LINE L1 5706 5783 -372 373 210 0 12 chr5 23091387 23091468 -176538682 - L1MA9 LINE L1 -693 5619 5540 * 1214 209 11 0 chr5 23091475 23091753 -176538397 + L1 LINE L1 3398 3678 -2468 23 0 0 0 chr5 23091761 23091784 -176538366 + AT_rich Low_complexity Low_complexity 1 23 0 1767 271 128 12 chr5 23093032 23093823 -176536327 + L1MDa LINE L1 499 1527 -5013 2056 89 3 71 chr5 23094661 23094997 -176535153 + AluSp SINE Alu 1 313 0 21 0 0 0 chr5 23095412 23095433 -176534717 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 23096061 23096084 -176534066 + AT_rich Low_complexity Low_complexity 1 23 0 207 114 0 0 chr5 23296990 23297025 -176333125 + (ATG)n Simple_repeat Simple_repeat 2 36 0 1867 120 73 0 chr5 23297144 23297419 -176332731 + AluSc SINE Alu 1 295 -14 616 295 54 75 chr5 23297467 23297945 -176332205 - MLT1H LTR MaLR -57 492 25 754 240 211 71 chr5 23298266 23298769 -176331381 + MLT1F1 LTR MaLR 1 567 0 24 32 0 0 chr5 23299138 23299169 -176330981 + AT_rich Low_complexity Low_complexity 1 31 0 28 99 0 0 chr5 23299263 23299354 -176330796 + AT_rich Low_complexity Low_complexity 1 91 0 22 0 0 0 chr5 23299820 23299842 -176330308 + AT_rich Low_complexity Low_complexity 1 22 0 640 237 5 0 chr5 23299842 23300057 -176330093 - AluYa5 SINE Alu 0 311 96 2718 162 100 42 chr5 23300163 23300751 -176329399 + L1M1 LINE L1 1814 2435 -5130 7552 48 1 1 chr5 23300757 23302427 -176327723 + L1PA5 LINE L1 4439 6108 -46 5588 128 9 7 chr5 23302527 23304010 -176326140 + L1PA13 LINE L1 4704 6163 0 189 0 0 0 chr5 23304528 23304549 -176325601 + (T)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr5 23304999 23305028 -176325122 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr5 23305596 23305637 -176324513 + AT_rich Low_complexity Low_complexity 1 41 0 24 32 0 0 chr5 23305749 23305780 -176324370 + AT_rich Low_complexity Low_complexity 1 31 0 304 244 31 75 chr5 23305905 23306065 -176324085 - L1MEc LINE L1 -5066 1330 1178 237 288 59 20 chr5 23306087 23306240 -176323910 - L1M2c LINE L1 -4809 1980 1822 275 203 0 0 chr5 23306407 23306466 -176323684 - MLT2C1 LTR ERVL 0 520 462 290 87 22 0 chr5 23306478 23306524 -176323626 + (GA)n Simple_repeat Simple_repeat 1 47 0 1512 236 20 9 chr5 23306529 23306873 -176323277 - MLT2C1 LTR ERVL -48 349 2 511 271 24 24 chr5 23307879 23308015 -176322135 - L1MA10 LINE L1 -41 6293 6155 243 61 0 0 chr5 23308015 23308048 -176322102 + (TG)n Simple_repeat Simple_repeat 2 34 0 511 271 24 24 chr5 23308048 23308081 -176322069 - L1MA10 LINE L1 -178 6156 6124 6876 48 14 8 chr5 23308106 23309065 -176321085 + L1PA5 LINE L1 5183 6146 -8 2382 140 12 22 chr5 23309068 23309481 -176320669 + L1P4 LINE L1 5315 5723 -443 2912 218 19 8 chr5 23309495 23310138 -176320012 - L1MB1 LINE L1 -160 6029 5380 266 307 78 30 chr5 23310309 23310475 -176319675 - L2 LINE L2 -1305 2009 1836 275 302 28 0 chr5 23310704 23310810 -176319340 - HsTC2 DNA Tc2 -1786 112 4 288 248 26 17 chr5 23315038 23315155 -176314995 + (TA)n Simple_repeat Simple_repeat 1 118 0 1238 213 109 30 chr5 23316032 23316370 -176313780 - MLT1A1 LTR MaLR 0 365 1 335 143 31 10 chr5 23316560 23316658 -176313492 + (TA)n Simple_repeat Simple_repeat 1 100 0 183 387 16 0 chr5 23317124 23317186 -176312964 + L2 LINE L2 2207 2269 -1045 21 0 0 0 chr5 23317247 23317268 -176312882 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 23317357 23317378 -176312772 + AT_rich Low_complexity Low_complexity 1 21 0 994 174 20 49 chr5 23317659 23317906 -176312244 + L1MC1 LINE L1 6094 6333 0 518 161 73 3 chr5 23319488 23319599 -176310551 - L1MA9 LINE L1 -18 6282 6166 7842 208 33 8 chr5 23319982 23321372 -176308778 + L1M1 LINE L1 19 1453 -6112 350 0 44 0 chr5 23321372 23321417 -176308733 + (AATAG)n Simple_repeat Simple_repeat 2 48 0 7842 208 33 8 chr5 23321417 23321559 -176308591 + L1M1 LINE L1 1453 1590 -5975 703 230 52 17 chr5 23321801 23321975 -176308175 + MER20 DNA MER1_type 2 181 -38 3997 191 8 0 chr5 23325767 23326527 -176303623 - L1P LINE L1 -3457 2689 1924 6686 189 80 11 chr5 23326544 23326715 -176303435 + L1P LINE L1 3057 3215 -2931 2098 100 0 7 chr5 23326715 23327024 -176303126 + AluSc SINE Alu 1 307 0 6686 189 80 11 chr5 23327024 23328293 -176301857 + L1P LINE L1 3215 4605 -1541 3559 71 2 0 chr5 23328293 23328745 -176301405 + MLT2A2 LTR ERVL 1 453 0 6686 189 80 11 chr5 23328745 23328780 -176301370 + L1P LINE L1 4605 4636 -1510 3956 171 30 52 chr5 23329146 23330026 -176300124 - L1MB3 LINE L1 -2 6181 5322 1797 131 7 18 chr5 23331625 23331946 -176298204 + AluSx SINE Alu 4 321 0 790 219 122 15 chr5 23332286 23332512 -176297638 + AluJo SINE Alu 66 312 0 1764 152 18 11 chr5 23332588 23332900 -176297250 - AluSx SINE Alu 0 314 1 408 336 92 37 chr5 23332942 23333269 -176296881 - L1ME LINE L1 -327 5794 5450 241 327 29 0 chr5 23334016 23334120 -176296030 + L2 LINE L2 1916 2022 -1292 1907 139 7 19 chr5 23334617 23334926 -176295224 - Charlie3 DNA MER1_type -4 2706 2402 11542 173 15 7 chr5 23335026 23338117 -176292033 - L1PA12 LINE L1 -94 6074 2958 237 242 0 0 chr5 23338187 23338253 -176291897 - L1ME LINE L1 -348 5822 5757 1794 167 44 101 chr5 23338956 23339411 -176290739 + MSTB1 LTR MaLR 4 432 0 24 53 0 0 chr5 23340148 23340186 -176289964 + AT_rich Low_complexity Low_complexity 1 38 0 237 268 0 14 chr5 23340384 23340455 -176289695 + (TA)n Simple_repeat Simple_repeat 2 71 0 1298 231 19 53 chr5 23341070 23341446 -176288704 + MLT1A1 LTR MaLR 1 363 -2 208 286 22 11 chr5 23342014 23342105 -176288045 + (TA)n Simple_repeat Simple_repeat 1 92 0 24 77 0 0 chr5 23342293 23342345 -176287805 + AT_rich Low_complexity Low_complexity 1 52 0 22 70 0 0 chr5 23343424 23343467 -176286683 + AT_rich Low_complexity Low_complexity 1 43 0 2840 10 0 0 chr5 23343494 23343806 -176286344 + AluYb8 SINE Alu 1 312 -6 341 229 0 0 chr5 23344497 23344558 -176285592 - MER8 DNA MER2_type 0 239 179 1318 187 142 89 chr5 23344563 23344980 -176285170 + Tigger2 DNA MER2_type 2280 2718 0 27 0 0 0 chr5 23346016 23346043 -176284107 + AT_rich Low_complexity Low_complexity 1 27 0 471 72 0 0 chr5 23346751 23346820 -176283330 + AluS SINE Alu 1 69 -243 1396 193 23 36 chr5 23346876 23347173 -176282977 - MER61A LTR ERV1 0 343 49 1927 70 12 12 chr5 23347173 23347431 -176282719 - AluSq SINE Alu -55 258 1 2229 211 17 6 chr5 23347439 23347908 -176282242 - ERVL LTR ERVL -4525 1239 766 435 62 0 0 chr5 23347953 23348019 -176282131 + Alu SINE Alu 246 336 0 184 80 0 0 chr5 23348019 23348044 -176282106 + (GAAAA)n Simple_repeat Simple_repeat 2 180 0 3024 230 22 18 chr5 23348044 23348719 -176281431 + ERVL LTR ERVL 1235 1912 -3852 216 97 0 0 chr5 23348719 23348750 -176281400 + (CA)n Simple_repeat Simple_repeat 2 32 0 291 157 0 0 chr5 23348767 23348818 -176281332 + T-rich Low_complexity Low_complexity 1 51 0 26 69 0 35 chr5 23349660 23349747 -176280403 + AT_rich Low_complexity Low_complexity 1 84 0 36 40 0 0 chr5 23349987 23350037 -176280113 + AT_rich Low_complexity Low_complexity 1 50 0 1397 246 66 0 chr5 23350893 23351242 -176278908 + MER67D LTR ERV1 5 376 -138 1756 159 55 0 chr5 23351400 23351689 -176278461 - AluSg SINE Alu -3 307 3 26 0 0 0 chr5 23351699 23351725 -176278425 + AT_rich Low_complexity Low_complexity 1 26 0 2953 96 41 2 chr5 23352074 23352510 -176277640 - MLT2A2 LTR ERVL 0 453 1 26 82 0 0 chr5 23352597 23352658 -176277492 + AT_rich Low_complexity Low_complexity 1 61 0 619 298 64 34 chr5 23353221 23353516 -176276634 - LTR16C LTR ERVL 0 491 188 15621 112 47 23 chr5 23353639 23356007 -176274143 + Charlie3 DNA MER1_type 1 2424 -286 27 49 0 0 chr5 23357067 23357108 -176273042 + AT_rich Low_complexity Low_complexity 1 41 0 216 196 11 22 chr5 23357990 23358082 -176272068 + (TA)n Simple_repeat Simple_repeat 2 92 0 540 130 16 49 chr5 23358097 23358282 -176271868 + (TA)n Simple_repeat Simple_repeat 2 180 0 230 242 22 22 chr5 23358299 23358390 -176271760 - L1MC4 LINE L1 -1338 6704 6614 225 146 0 0 chr5 23358394 23358435 -176271715 + LTR66 LTR ERVL 398 438 -172 243 156 13 52 chr5 23358456 23358533 -176271617 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 25 0 0 0 chr5 23359070 23359095 -176271055 + AT_rich Low_complexity Low_complexity 1 25 0 232 188 94 16 chr5 23359133 23359197 -176270953 - MLT1H LTR MaLR 0 549 481 2314 68 0 7 chr5 23359379 23359671 -176270479 - AluY SINE Alu -19 292 3 265 277 66 36 chr5 23359722 23359859 -176270291 - MLT1H LTR MaLR -406 143 3 244 302 107 65 chr5 23359919 23360134 -176270016 + LTR16A LTR ERVL 25 248 -202 398 237 58 64 chr5 23361432 23361605 -176268545 - MLT1H LTR MaLR -375 174 3 263 356 25 0 chr5 23361769 23361887 -176268263 + L2 LINE L2 2342 2462 -852 2491 20 0 7 chr5 23362366 23362663 -176267487 + AluY SINE Alu 1 295 -16 308 373 8 0 chr5 23363443 23363561 -176266589 + L2 LINE L2 2226 2344 -970 419 240 64 8 chr5 23363609 23363734 -176266416 - MLT1G LTR MaLR -2 588 457 * 618 308 97 68 chr5 23363733 23364095 -176266055 - MLT1G LTR MaLR -176 354 1 185 0 40 0 chr5 23364243 23364268 -176265882 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 30 59 0 0 chr5 23364662 23364713 -176265437 + AT_rich Low_complexity Low_complexity 1 51 0 210 279 35 35 chr5 23367197 23367283 -176262867 + L2 LINE L2 3185 3270 -2 23 33 0 0 chr5 23367493 23367523 -176262627 + AT_rich Low_complexity Low_complexity 1 30 0 55 62 0 0 chr5 23367941 23368038 -176262112 + AT_rich Low_complexity Low_complexity 1 97 0 249 250 0 38 chr5 23369123 23369203 -176260947 - L1MC4 LINE L1 -1330 6712 6636 1021 210 63 52 chr5 23369214 23369500 -176260650 - AluJb SINE Alu -13 289 1 445 284 35 21 chr5 23371969 23372110 -176258040 + MIR SINE MIR 3 145 -117 278 337 121 33 chr5 23372217 23372490 -176257660 + MLT1J2 LTR MaLR 113 409 -41 241 261 65 0 chr5 23372535 23372627 -176257523 + MIR SINE MIR 137 234 -28 26 50 0 0 chr5 23373304 23373344 -176256806 + AT_rich Low_complexity Low_complexity 1 40 0 1298 180 176 28 chr5 23373443 23373876 -176256274 + LTR54B LTR ERV1 1 497 -1 773 158 80 34 chr5 23374519 23374828 -176255322 + MER52A-int LTR ERV1 4298 4690 -1256 403 57 0 0 chr5 23374832 23374885 -176255265 + MER52A-int LTR ERV1 5976 6028 -1177 * 1148 144 64 5 chr5 23374883 23375070 -176255080 + MER52A-int LTR ERV1 6892 7089 -2 296 224 0 40 chr5 23375072 23375148 -176255002 + MER52A LTR ERV1 1 73 -1682 6750 204 139 9 chr5 23375764 23377291 -176252859 + MER52A LTR ERV1 21 1746 -9 191 282 154 0 chr5 23377624 23377680 -176252470 + MIR SINE MIR 134 180 -82 243 0 0 0 chr5 23377680 23377707 -176252443 + (CA)n Simple_repeat Simple_repeat 2 28 0 191 282 154 0 chr5 23377707 23377760 -176252390 + MIR SINE MIR 180 260 -2 22 0 0 0 chr5 23378491 23378513 -176251637 + AT_rich Low_complexity Low_complexity 1 22 0 3003 177 37 6 chr5 23378840 23379462 -176250688 + L1MA4 LINE L1 5658 6298 -2 2024 176 37 30 chr5 23379660 23380210 -176249940 + MLT2A2 LTR ERVL 1 554 0 1507 206 26 84 chr5 23380210 23380607 -176249543 - MER67D LTR ERV1 -89 425 57 318 26 0 0 chr5 23380607 23380646 -176249504 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1507 206 26 84 chr5 23380646 23380700 -176249450 - MER67D LTR ERV1 -457 57 1 1148 201 94 4 chr5 23380876 23381120 -176249030 + AluJo SINE Alu 17 282 -30 1788 150 29 0 chr5 23381124 23381449 -176248701 - AluSx SINE Alu 0 333 1 22 56 0 0 chr5 23381759 23381795 -176248355 + AT_rich Low_complexity Low_complexity 1 36 0 373 322 24 29 chr5 23381956 23382164 -176247986 - L1M4 LINE L1 -1326 4820 4614 376 340 26 13 chr5 23382327 23382483 -176247667 + L2 LINE L2 3154 3311 -2 240 86 0 0 chr5 23383037 23383072 -176247078 + (CAT)n Simple_repeat Simple_repeat 1 35 0 822 229 0 0 chr5 23383784 23383937 -176246213 + FRAM SINE Alu 1 153 -23 909 301 81 22 chr5 23383941 23384460 -176245690 - L2 LINE L2 -534 2780 2182 541 285 57 45 chr5 23384853 23385145 -176245005 + MLT1E1 LTR MaLR 275 633 -21 1515 170 131 6 chr5 23385149 23385504 -176244646 - MSTA LTR MaLR 0 428 1 2032 107 6 31 chr5 23385695 23386014 -176244136 - AluY SINE Alu 0 311 1 245 278 22 33 chr5 23386605 23386695 -176243455 + LTR16A1 LTR ERVL 366 454 -3 340 275 11 0 chr5 23386697 23386788 -176243362 - L2 LINE L2 -767 2547 2456 327 233 0 0 chr5 23388862 23388922 -176241228 + L1MA2 LINE L1 1834 1893 -5672 2570 143 9 83 chr5 23388926 23389176 -176240974 + L1MA2 LINE L1 2653 2839 -4726 1957 143 0 3 chr5 23389176 23389469 -176240681 - AluSq SINE Alu -21 292 1 2570 143 9 83 chr5 23389469 23389786 -176240364 + L1MA2 LINE L1 2839 3178 -4387 11295 179 94 18 chr5 23389795 23394085 -176236065 + L1PB1 LINE L1 1 5168 -1694 189 0 0 0 chr5 23394085 23394106 -176236044 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 11295 179 94 18 chr5 23394106 23394764 -176235386 + L1PB1 LINE L1 5168 5775 -1087 5033 112 19 29 chr5 23394756 23395249 -176234901 + L1PB1 LINE L1 6052 6535 -332 * 2711 31 0 3 chr5 23395249 23395568 -176234582 + AluYb8 SINE Alu 1 318 0 5033 112 19 29 chr5 23395568 23395893 -176234257 + L1PB1 LINE L1 6535 6862 -5 10601 186 32 19 chr5 23395904 23399101 -176231049 + L1MA2 LINE L1 3169 6322 -1401 2177 127 0 0 chr5 23399101 23399408 -176230742 + AluSg SINE Alu 1 307 -3 10601 186 32 19 chr5 23399408 23400650 -176229500 + L1MA2 LINE L1 6322 7705 -18 2098 82 0 36 chr5 23400650 23400956 -176229194 + AluY SINE Alu 1 295 -16 26 30 0 0 chr5 23401055 23401088 -176229062 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr5 23401211 23401235 -176228915 + AT_rich Low_complexity Low_complexity 1 24 0 1742 215 90 35 chr5 23401767 23402246 -176227904 + MLT1D LTR MaLR 1 505 0 27 49 0 0 chr5 23402249 23402290 -176227860 + AT_rich Low_complexity Low_complexity 1 41 0 1813 152 53 22 chr5 23402292 23402648 -176227502 - L1PA16 LINE L1 -9 6157 5791 594 305 81 40 chr5 23404205 23404583 -176225567 - MLT1L LTR MaLR -8 607 209 1772 110 3 51 chr5 23404583 23404875 -176225275 - AluSx SINE Alu -34 278 1 594 305 81 40 chr5 23404875 23404916 -176225234 - MLT1L LTR MaLR -406 209 171 322 289 146 29 chr5 23405099 23405338 -176224812 - L1MEc LINE L1 -4816 1494 1228 317 308 51 19 chr5 23405360 23405516 -176224634 - L1MEc LINE L1 -4968 1151 991 5922 127 88 67 chr5 23405818 23407787 -176222363 - pTR5 LTR ERV1 0 2438 741 2428 197 22 15 chr5 23409986 23410524 -176219626 - L1MC3 LINE L1 -7 7778 7237 469 155 32 75 chr5 23410528 23410785 -176219365 + (TATAG)n Simple_repeat Simple_repeat 1 246 0 229 122 68 0 chr5 23410997 23411071 -176219079 + (TTATA)n Simple_repeat Simple_repeat 1 79 0 31 58 0 0 chr5 23411330 23411382 -176218768 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 23411550 23411572 -176218578 + AT_rich Low_complexity Low_complexity 1 22 0 184 197 13 13 chr5 23411897 23411973 -176218177 + (TA)n Simple_repeat Simple_repeat 2 77 0 258 185 0 31 chr5 23412345 23412410 -176217740 + (TAAA)n Simple_repeat Simple_repeat 1 63 0 483 325 90 62 chr5 23413233 23413766 -176216384 + ERVL LTR ERVL 906 1453 -4311 1516 123 58 0 chr5 23413931 23414192 -176215958 - L1MA5A LINE L1 -4 6293 6018 313 92 0 46 chr5 23414406 23414453 -176215697 + (TTTTTA)n Simple_repeat Simple_repeat 3 48 -16 6140 10 0 0 chr5 23414453 23415146 -176215004 - L1PA3 LINE L1 0 6155 5463 313 92 0 46 chr5 23415146 23415163 -176214987 + (TTTTTA)n Simple_repeat Simple_repeat 48 64 0 213 222 0 0 chr5 23415297 23415360 -176214790 + (CATA)n Simple_repeat Simple_repeat 2 64 0 192 40 0 0 chr5 23415360 23415385 -176214765 + (TG)n Simple_repeat Simple_repeat 2 26 0 276 270 144 0 chr5 23416537 23416648 -176213502 - L1ME LINE L1 -433 5688 5562 25 0 0 0 chr5 23416839 23416864 -176213286 + AT_rich Low_complexity Low_complexity 1 25 0 228 133 89 0 chr5 23416876 23416921 -176213229 + L2 LINE L2 3265 3313 0 21 0 0 0 chr5 23419025 23419046 -176211104 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 23419103 23419125 -176211025 + AT_rich Low_complexity Low_complexity 1 22 0 1751 162 33 16 chr5 23419467 23420190 -176209960 + L1PA14 LINE L1 1 1895 -4892 * 14442 211 33 11 chr5 23420188 23421852 -176208298 + L1PA14 LINE L1 2614 4240 -2557 255 79 0 0 chr5 23421852 23421890 -176208260 + (CA)n Simple_repeat Simple_repeat 2 39 0 14442 211 33 11 chr5 23421890 23423207 -176206943 + L1PA14 LINE L1 4240 5680 -1117 2125 100 4 0 chr5 23423207 23423507 -176206643 + AluY SINE Alu 1 301 0 14442 211 33 11 chr5 23423507 23423883 -176206267 + L1PA14 LINE L1 5680 6046 -751 1567 179 21 3 chr5 23423884 23424169 -176205981 + AluSq SINE Alu 1 290 -23 2871 148 9 0 chr5 23424169 23424621 -176205529 + L1PA14 LINE L1 6144 6599 -213 2138 150 22 19 chr5 23424622 23424983 -176205167 - THE1B LTR MaLR 0 364 3 3885 100 0 0 chr5 23424985 23425497 -176204653 - THE1B-int LTR MaLR 0 1580 1069 41 21 0 0 chr5 23425655 23425703 -176204447 + AT_rich Low_complexity Low_complexity 1 48 0 1710 172 40 0 chr5 23425764 23426061 -176204089 + AluJb SINE Alu 1 309 -3 1964 74 0 0 chr5 23426410 23426689 -176203461 + AluY SINE Alu 39 317 0 1924 123 5 115 chr5 23427046 23427420 -176202730 + MER1B DNA MER1_type 3 335 -4 388 93 27 0 chr5 23428450 23428525 -176201625 + (TA)n Simple_repeat Simple_repeat 2 78 0 683 147 202 23 chr5 23428525 23428654 -176201496 + AluSg/x SINE Alu 135 286 -24 21 0 0 0 chr5 23428677 23428698 -176201452 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 23429878 23429900 -176200250 + AT_rich Low_complexity Low_complexity 1 22 0 713 288 5 26 chr5 23430126 23430317 -176199833 + Tigger3(Golem) DNA MER2_type 1 187 -2842 208 231 22 66 chr5 23431213 23431304 -176198846 + MIR SINE MIR 122 208 -54 5174 223 27 26 chr5 23432246 23434687 -176195463 - L1MC1 LINE L1 -9 6324 3884 27 29 0 0 chr5 23435271 23435305 -176194845 + AT_rich Low_complexity Low_complexity 1 34 0 219 36 0 0 chr5 23435864 23435892 -176194258 + (TG)n Simple_repeat Simple_repeat 2 29 0 1310 171 12 4 chr5 23436540 23436786 -176193364 - L1MA8 LINE L1 -134 6157 5910 468 231 26 0 chr5 23436775 23436892 -176193258 + L1MA8 LINE L1 6172 6291 0 * 25 90 0 0 chr5 23437395 23437462 -176192688 + AT_rich Low_complexity Low_complexity 1 67 0 282 95 0 0 chr5 23437869 23437911 -176192239 + (GA)n Simple_repeat Simple_repeat 1 42 0 29 47 0 0 chr5 23438044 23438087 -176192063 + AT_rich Low_complexity Low_complexity 1 43 0 24 0 0 0 chr5 23438694 23438718 -176191432 + AT_rich Low_complexity Low_complexity 1 24 0 2269 105 3 10 chr5 23438765 23439079 -176191071 - AluSx SINE Alu 0 312 1 26 50 0 0 chr5 23439299 23439339 -176190811 + AT_rich Low_complexity Low_complexity 1 40 0 269 271 75 37 chr5 23439744 23439851 -176190299 + L2 LINE L2 3187 3297 -16 204 290 0 0 chr5 23439881 23439943 -176190207 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 696 182 8 0 chr5 23439959 23440091 -176190059 - FLAM_C SINE Alu 0 133 1 22 35 0 0 chr5 23440216 23440245 -176189905 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 23440404 23440433 -176189717 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 23440472 23440493 -176189657 + AT_rich Low_complexity Low_complexity 1 21 0 17105 60 2 2 chr5 23440857 23443881 -176186269 - L1PA5 LINE L1 0 6154 3131 3138 134 0 7 chr5 23444197 23444659 -176185491 - THE1-int LTR MaLR -729 851 393 580 129 10 0 chr5 23444659 23444760 -176185390 + L1PA13 LINE L1 6062 6163 0 22 35 0 0 chr5 23444760 23444789 -176185361 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr5 23445094 23445139 -176185011 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr5 23446162 23446198 -176183952 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 23446465 23446489 -176183661 + AT_rich Low_complexity Low_complexity 1 24 0 578 326 126 26 chr5 23447738 23448088 -176182062 + L2 LINE L2 1455 1839 -1475 270 352 30 30 chr5 23448121 23448357 -176181793 + L2 LINE L2 3074 3309 -4 879 319 81 23 chr5 23448981 23449413 -176180737 + LTR16B LTR ERVL 8 464 0 965 320 38 12 chr5 23449725 23450144 -176180006 + HERV16 LTR ERVL 839 1268 -3728 24 0 0 0 chr5 23451466 23451490 -176178660 + AT_rich Low_complexity Low_complexity 1 24 0 507 303 17 27 chr5 23451610 23451907 -176178243 - L1ME LINE L1 -552 5610 5317 7775 18 0 5 chr5 23451912 23453434 -176176716 - L1PA3 LINE L1 -4 6151 4634 305 253 160 38 chr5 23453586 23453823 -176176327 + L1M4 LINE L1 4807 5072 -1074 11368 207 34 31 chr5 23453913 23455222 -176174928 + L1PB4 LINE L1 2300 3604 -2542 1612 201 28 3 chr5 23455222 23455541 -176174609 + L1PB4 LINE L1 5825 6151 -5 11368 207 34 31 chr5 23455541 23455568 -176174582 + L1PB4 LINE L1 3604 3629 -2517 2163 128 10 0 chr5 23455568 23455874 -176174276 + AluSx SINE Alu 2 310 -2 11368 207 34 31 chr5 23455874 23456287 -176173863 + L1PB4 LINE L1 3629 4039 -2107 317 89 0 0 chr5 23456287 23456332 -176173818 + MADE1 DNA Mariner 1 45 -35 11368 207 34 31 chr5 23456332 23457465 -176172685 + L1PB4 LINE L1 4039 5237 -909 1588 216 39 23 chr5 23457999 23458383 -176171767 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr5 23460581 23460604 -176169546 + AT_rich Low_complexity Low_complexity 1 23 0 42381 37 23 2 chr5 23461551 23467343 -176162807 - L1PA3 LINE L1 -232 5923 3 700 203 49 0 chr5 23467569 23467712 -176162438 + MER67D LTR ERV1 1 150 -364 3366 96 14 2 chr5 23467712 23468201 -176161949 - L1PA14 LINE L1 -1 6160 5666 3761 128 2 16 chr5 23468202 23468854 -176161296 - L1PA14 LINE L1 -333 5828 5187 974 226 67 46 chr5 23468854 23469137 -176161013 + MER67C LTR ERV1 115 403 -307 310 261 142 8 chr5 23469149 23469283 -176160867 + MER67D LTR ERV1 359 510 -4 217 174 22 0 chr5 23470048 23470094 -176160056 + A-rich Low_complexity Low_complexity 4 50 0 229 258 97 32 chr5 23470715 23470808 -176159342 + MLT1L LTR MaLR 1 99 -516 32 67 0 0 chr5 23471329 23471389 -176158761 + AT_rich Low_complexity Low_complexity 1 60 0 1466 147 126 4 chr5 23471747 23472125 -176158025 - MER1A DNA MER1_type -14 519 57 30 0 0 0 chr5 23473854 23473884 -176156266 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr5 23475515 23475538 -176154612 + (TAAAAA)n Simple_repeat Simple_repeat 3 25 0 204 339 0 0 chr5 23475719 23475784 -176154366 + GA-rich Low_complexity Low_complexity 3 67 0 2401 50 9 31 chr5 23476974 23477292 -176152858 - AluY SINE Alu 0 311 1 213 214 0 0 chr5 23477572 23477614 -176152536 + T-rich Low_complexity Low_complexity 3 44 0 262 269 30 75 chr5 23477650 23477784 -176152366 - MIR SINE MIR -122 140 13 209 229 73 94 chr5 23477799 23477895 -176152255 + L2 LINE L2 3167 3260 -12 209 300 100 14 chr5 23478144 23478214 -176151936 + MIR SINE MIR 7 82 -180 229 180 0 20 chr5 23478261 23478311 -176151839 + MER58 DNA MER1_type 2364 2412 -8 2333 74 0 3 chr5 23478446 23478745 -176151405 - AluY SINE Alu -12 299 2 605 255 129 57 chr5 23479985 23480042 -176150108 - MLT1A2 LTR MaLR 0 374 323 2107 78 4 4 chr5 23480042 23480313 -176149837 + AluSc SINE Alu 26 296 -13 605 255 129 57 chr5 23480313 23480604 -176149546 - MLT1A2 LTR MaLR -51 323 1 24 91 0 0 chr5 23480617 23480683 -176149467 + AT_rich Low_complexity Low_complexity 1 66 0 1712 111 58 4 chr5 23481516 23481777 -176148373 - AluSx SINE Alu -16 296 22 212 189 0 19 chr5 23481892 23481945 -176148205 + T-rich Low_complexity Low_complexity 5 56 0 414 56 0 0 chr5 23484180 23484234 -176145916 + MADE1 DNA Mariner 26 79 -1 23 54 0 0 chr5 23484740 23484777 -176145373 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 23484887 23484908 -176145242 + AT_rich Low_complexity Low_complexity 1 21 0 758 252 104 43 chr5 23485076 23485469 -176144681 + ERVL-F LTR ERVL 5330 5746 -18 1164 247 35 38 chr5 23485477 23486019 -176144131 + MLT2F LTR ERVL 9 603 -60 1704 260 9 0 chr5 23487005 23487459 -176142691 + L1M4 LINE L1 4815 5272 -874 1530 39 0 0 chr5 23487459 23487639 -176142511 + AluY SINE Alu 1 180 -131 599 322 48 9 chr5 23488182 23488409 -176141741 + MIR SINE MIR 19 254 -8 252 152 65 0 chr5 23488448 23488494 -176141656 + MER53 DNA DNA 1 49 -140 377 246 98 0 chr5 23488509 23488631 -176141519 - L1MA9 LINE L1 -10 6302 6169 259 254 0 0 chr5 23488722 23488785 -176141365 - MER53 DNA DNA -101 88 26 2409 74 0 0 chr5 23488786 23489082 -176141068 - AluY SINE Alu -15 296 1 7201 157 19 9 chr5 23489331 23490618 -176139532 + HSMAR2 DNA Mariner 3 1301 -1 2094 149 22 8 chr5 23491103 23491458 -176138692 - THE1B LTR MaLR -2 362 3 27 49 0 0 chr5 23492024 23492065 -176138085 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr5 23492262 23492284 -176137866 + AT_rich Low_complexity Low_complexity 1 22 0 400 232 107 55 chr5 23492293 23492620 -176137530 - L1M4 LINE L1 -1469 4677 4334 637 203 25 0 chr5 23492913 23493031 -176137119 - MLT1A2 LTR MaLR -248 126 6 24 0 0 0 chr5 23493146 23493170 -176136980 + AT_rich Low_complexity Low_complexity 1 24 0 1826 213 14 16 chr5 23493842 23494209 -176135941 - MLT1A2 LTR MaLR -2 372 7 23 0 0 0 chr5 23494452 23494475 -176135675 + AT_rich Low_complexity Low_complexity 1 23 0 2204 105 105 28 chr5 23494475 23494824 -176135326 - L1MA3 LINE L1 0 6305 5921 2885 106 48 33 chr5 23494824 23495306 -176134844 + LTR22B LTR ERVK 1 489 -3 2204 105 105 28 chr5 23495306 23495348 -176134802 - L1MA3 LINE L1 -384 5921 5884 969 226 36 81 chr5 23495635 23496183 -176133967 + MLT2A2 LTR ERVL 1 514 -40 733 153 0 0 chr5 23496195 23496306 -176133844 + ERVL LTR ERVL 798 908 -4856 308 121 0 121 chr5 23496309 23496347 -176133803 + MLT2B1 LTR ERVL 448 472 -48 279 0 0 0 chr5 23496347 23496378 -176133772 + (TG)n Simple_repeat Simple_repeat 2 32 0 308 121 0 121 chr5 23496378 23496422 -176133728 + MLT2B1 LTR ERVL 472 520 0 5081 194 18 10 chr5 23496451 23497436 -176132714 + HERVL-B1 LTR ERVL 19 1011 -4643 1164 218 16 4 chr5 23497443 23497695 -176132455 + MSTB LTR MaLR 7 261 -165 259 351 54 0 chr5 23497987 23498098 -176132052 - MIR SINE MIR -67 141 25 26 0 0 0 chr5 23498884 23498910 -176131240 + AT_rich Low_complexity Low_complexity 1 26 0 355 109 47 16 chr5 23498947 23499011 -176131139 - HERVL LTR ERVL -5031 623 558 618 265 27 58 chr5 23499807 23500030 -176130120 + LTR16C LTR ERVL 182 397 -94 554 229 150 38 chr5 23500463 23500782 -176129368 + MLT1G1 LTR MaLR 1 360 -182 3307 123 14 41 chr5 23501053 23501267 -176128883 - L1PA14 LINE L1 -135 6026 5808 459 0 0 0 chr5 23501267 23501318 -176128832 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2198 89 0 0 chr5 23501321 23501601 -176128549 - AluSg SINE Alu -30 280 1 3307 123 14 41 chr5 23501601 23501943 -176128207 - L1PA14 LINE L1 -355 5806 5481 5664 66 5 1 chr5 23501943 23502688 -176127462 - L1PA7 LINE L1 -3 6151 5404 6467 85 35 38 chr5 23502688 23503721 -176126429 + L1PA7 LINE L1 4362 5391 -755 24 0 0 0 chr5 23504413 23504437 -176125713 + AT_rich Low_complexity Low_complexity 1 24 0 306 0 0 0 chr5 23505034 23505098 -176125052 + (CA)n Simple_repeat Simple_repeat 1 98 0 306 0 0 0 chr5 23505098 23505132 -176125018 + (CA)n Simple_repeat Simple_repeat 1 34 0 194 371 149 4 chr5 23505226 23505501 -176124649 + L2 LINE L2 2851 3165 -107 1962 99 62 0 chr5 23507283 23507556 -176122594 - AluSx SINE Alu -22 290 1 34 65 0 0 chr5 23507572 23507634 -176122516 + AT_rich Low_complexity Low_complexity 1 62 0 207 0 0 0 chr5 23507766 23507789 -176122361 + (TC)n Simple_repeat Simple_repeat 2 24 0 330 156 0 0 chr5 23508719 23508783 -176121367 + (CA)n Simple_repeat Simple_repeat 1 64 0 1105 263 53 33 chr5 23509554 23509949 -176120201 + LTR52 LTR ERVL 16 418 -3 2011 103 4 4 chr5 23510210 23510491 -176119659 - AluSc SINE Alu -28 281 1 1292 255 50 60 chr5 23510592 23511076 -176119074 + MLT2B1 LTR ERVL 1 481 -39 225 94 0 0 chr5 23511076 23511108 -176119042 + (CA)n Simple_repeat Simple_repeat 1 32 0 1292 255 50 60 chr5 23511108 23511144 -176119006 + MLT2B1 LTR ERVL 481 516 -4 22 35 0 0 chr5 23511982 23512011 -176118139 + AT_rich Low_complexity Low_complexity 1 29 0 1715 159 161 11 chr5 23512021 23512393 -176117757 - MSTA LTR MaLR 0 428 1 1136 230 125 26 chr5 23512411 23512715 -176117435 + MLT1A1 LTR MaLR 1 334 -31 240 180 49 49 chr5 23513716 23513777 -176116373 + MLT1I LTR MaLR 349 409 0 6253 147 34 33 chr5 23514176 23515214 -176114936 + Tigger3b DNA MER2_type 3 1044 -1984 2374 59 16 13 chr5 23515214 23515519 -176114631 - AluY SINE Alu -5 306 1 6253 147 34 33 chr5 23515519 23515708 -176114442 + Tigger3b DNA MER2_type 1044 1231 0 21 89 0 0 chr5 23516127 23516183 -176113967 + AT_rich Low_complexity Low_complexity 1 56 0 2285 80 14 39 chr5 23516192 23516556 -176113594 - L1PA8 LINE L1 0 6172 5818 659 237 29 23 chr5 23519287 23519460 -176110690 + MER58A DNA MER1_type 48 221 -3 23 97 0 0 chr5 23519650 23519722 -176110428 + AT_rich Low_complexity Low_complexity 1 72 0 337 242 181 40 chr5 23519780 23519929 -176110221 - MER5B DNA MER1_type -7 171 2 1168 121 6 6 chr5 23520425 23520598 -176109552 - AluSp SINE Alu -15 298 126 287 223 65 93 chr5 23520792 23520931 -176109219 - MER104 DNA Tc2 -44 136 2 24 96 0 0 chr5 23522919 23522992 -176107158 + AT_rich Low_complexity Low_complexity 1 73 0 261 0 0 0 chr5 23523753 23523782 -176106368 + (CA)n Simple_repeat Simple_repeat 2 30 0 1773 180 8 42 chr5 23524976 23525331 -176104819 + MER2 DNA MER2_type 1 343 -2 2319 98 0 0 chr5 23525472 23525767 -176104383 - AluSx SINE Alu -12 300 6 450 250 28 7 chr5 23526325 23526469 -176103681 - L1M4 LINE L1 -2196 3950 3804 311 164 107 66 chr5 23526708 23526830 -176103320 - HAL1b LINE L1 -142 1206 1080 33 43 0 0 chr5 23527145 23527192 -176102958 + AT_rich Low_complexity Low_complexity 1 47 0 2448 62 0 0 chr5 23527486 23527795 -176102355 - AluY SINE Alu -2 309 1 4957 211 46 36 chr5 23528315 23530484 -176099666 + L1MC1 LINE L1 4127 6316 -17 2067 124 0 34 chr5 23531950 23532273 -176097877 - AluSq SINE Alu -1 312 1 453 310 27 11 chr5 23532779 23532963 -176097187 - MER20 DNA MER1_type 0 219 33 30 45 0 0 chr5 23533844 23533888 -176096262 + AT_rich Low_complexity Low_complexity 1 44 0 27 0 0 0 chr5 23533977 23534004 -176096146 + AT_rich Low_complexity Low_complexity 1 27 0 842 236 0 116 chr5 23535536 23535820 -176094330 + MLT1A2 LTR MaLR 1 251 -123 534 228 121 31 chr5 23535858 23536148 -176094002 + L1M4 LINE L1 2039 2354 -4030 573 128 11 0 chr5 23536416 23536510 -176093640 + L1PA3 LINE L1 6058 6152 -3 580 232 58 7 chr5 23536755 23536893 -176093257 + L1MD2 LINE L1 26 170 -6370 288 284 8 15 chr5 23536894 23537028 -176093122 + L1M4 LINE L1 4104 4236 -2146 29 0 0 0 chr5 23537115 23537144 -176093006 + AT_rich Low_complexity Low_complexity 1 29 0 713 285 104 35 chr5 23537463 23537798 -176092352 - L1ME LINE L1 -4513 1567 1256 297 0 0 0 chr5 23537798 23537831 -176092319 + (TG)n Simple_repeat Simple_repeat 2 34 0 713 285 104 35 chr5 23537831 23538457 -176091693 - L1ME LINE L1 -4824 1256 528 2739 53 126 0 chr5 23539465 23539863 -176090287 - LTR7 LTR ERV1 -2 448 1 202 244 56 100 chr5 23539945 23540035 -176090115 - MIR3 SINE MIR -36 172 87 267 235 15 0 chr5 23541406 23541474 -176088676 + (TA)n Simple_repeat Simple_repeat 1 69 0 1693 205 67 29 chr5 23542060 23542552 -176087598 - MER9 LTR ERVK 0 511 1 2113 99 0 3 chr5 23542590 23542883 -176087267 + AluSg SINE Alu 1 292 -18 232 273 57 23 chr5 23544503 23544591 -176085559 - L2 LINE L2 -52 3261 3171 287 337 91 25 chr5 23544702 23544901 -176085249 - L2 LINE L2 -288 3025 2814 276 30 0 0 chr5 23545586 23545619 -176084531 + (CA)n Simple_repeat Simple_repeat 2 34 0 276 358 32 8 chr5 23546731 23546854 -176083296 - MIR SINE MIR -63 145 20 1135 283 10 0 chr5 23547453 23547746 -176082404 - MLT1E2 LTR MaLR 0 626 331 293 313 101 52 chr5 23548291 23548579 -176081571 - MLT1J LTR MaLR -78 433 132 307 420 8 0 chr5 23548808 23548927 -176081223 + L1MD2 LINE L1 553 672 -5871 3029 208 48 21 chr5 23548978 23549842 -176080308 + L1MD2 LINE L1 801 1683 -4857 2520 243 113 37 chr5 23549872 23551842 -176078308 + L1MD2 LINE L1 4423 6553 -200 251 28 28 0 chr5 23551842 23551878 -176078272 + (CA)n Simple_repeat Simple_repeat 1 37 0 2520 243 113 37 chr5 23551878 23551932 -176078218 + L1MD2 LINE L1 6553 6601 -152 870 172 20 0 chr5 23551936 23552087 -176078063 - MER44D DNA MER2_type 0 605 580 6407 112 80 8 chr5 23556659 23557859 -176072291 - LOR1-int LTR ERV1 -4314 3806 2520 304 420 8 0 chr5 23558887 23559006 -176071144 + L1MDb LINE L1 419 538 -5871 2519 214 74 7 chr5 23559057 23559750 -176070400 + L1MDb LINE L1 667 1405 -5004 1682 202 33 19 chr5 23559861 23560227 -176069923 - MER44D DNA MER2_type -321 384 14 494 214 17 8 chr5 23560242 23560359 -176069791 + L1MD1 LINE L1 6100 6217 -25 239 157 72 0 chr5 23560531 23560614 -176069536 + (TA)n Simple_repeat Simple_repeat 1 89 0 198 93 87 31 chr5 23560630 23560791 -176069359 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 222 43 0 64 chr5 23560797 23560863 -176069287 + (TAAA)n Simple_repeat Simple_repeat 1 105 0 222 43 0 64 chr5 23560863 23560910 -176069240 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 852 251 73 42 chr5 23561846 23562228 -176067922 + LTR52 LTR ERVL 25 418 -3 1882 92 22 4 chr5 23562485 23562757 -176067393 - AluSc SINE Alu -32 277 1 1214 250 60 60 chr5 23562857 23563336 -176066814 + MLT2B1 LTR ERVL 1 482 -38 225 94 0 0 chr5 23563336 23563368 -176066782 + (CA)n Simple_repeat Simple_repeat 1 32 0 1214 250 60 60 chr5 23563368 23563404 -176066746 + MLT2B1 LTR ERVL 481 516 -4 22 35 0 0 chr5 23564236 23564265 -176065885 + AT_rich Low_complexity Low_complexity 1 29 0 1465 181 178 3 chr5 23564274 23564633 -176065517 - MSTA LTR MaLR 0 428 7 278 32 97 16 chr5 23566061 23566123 -176064027 + (TATAA)n Simple_repeat Simple_repeat 5 71 0 21 89 0 0 chr5 23566238 23566294 -176063856 + AT_rich Low_complexity Low_complexity 1 56 0 2592 94 8 0 chr5 23566650 23567002 -176063148 + THE1A LTR MaLR 1 355 0 11391 106 2 2 chr5 23567002 23568583 -176061567 + THE1A-int LTR MaLR 1 1580 0 2149 86 131 0 chr5 23568583 23568897 -176061253 + THE1A LTR MaLR 1 355 0 26 30 0 0 chr5 23569202 23569235 -176060915 + AT_rich Low_complexity Low_complexity 1 33 0 1143 226 23 39 chr5 23569857 23570166 -176059984 - MER31A LTR ERV1 -9 476 173 530 163 10 20 chr5 23570176 23570274 -176059876 + THE1C LTR MaLR 279 375 0 8168 154 16 41 chr5 23570276 23571774 -176058376 + THE1C-int LTR MaLR 3 1463 -117 28 61 0 0 chr5 23571870 23571919 -176058231 + AT_rich Low_complexity Low_complexity 1 49 0 26 0 0 0 chr5 23572188 23572214 -176057936 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 23572278 23572307 -176057843 + AT_rich Low_complexity Low_complexity 1 29 0 713 265 6 0 chr5 23572875 23573045 -176057105 + AluJb SINE Alu 134 304 -8 2513 63 0 0 chr5 23573098 23573400 -176056750 + AluY SINE Alu 1 302 -9 227 292 138 0 chr5 23573765 23573895 -176056255 + MIR SINE MIR 56 203 -59 211 209 0 0 chr5 23574045 23574088 -176056062 + (CA)n Simple_repeat Simple_repeat 2 44 0 2542 49 3 0 chr5 23574292 23574596 -176055554 - AluY SINE Alu -6 305 1 1478 254 17 42 chr5 23575909 23576381 -176053769 + MLT1C LTR MaLR 8 467 0 21 57 0 0 chr5 23576547 23576582 -176053568 + AT_rich Low_complexity Low_complexity 1 35 0 1216 214 157 10 chr5 23576582 23576876 -176053274 + MER1B DNA MER1_type 1 337 0 864 323 33 17 chr5 23577661 23578104 -176052046 + HERVL LTR ERVL 2951 3484 -2280 301 336 15 45 chr5 23578161 23578295 -176051855 + HERVL LTR ERVL 3486 3615 -2039 555 301 31 51 chr5 23578377 23578669 -176051481 + HERVL LTR ERVL 3764 4049 -1715 693 333 42 17 chr5 23578682 23579036 -176051114 + HERVL LTR ERVL 4192 4554 -1210 21980 60 5 0 chr5 23579069 23582747 -176047403 + L1PA5 LINE L1 2468 6154 0 28 48 0 0 chr5 23582959 23583001 -176047149 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 23584212 23584233 -176045917 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 23586111 23586141 -176044009 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 23586323 23586353 -176043797 + AT_rich Low_complexity Low_complexity 1 30 0 217 326 23 12 chr5 23586811 23586897 -176043253 - MIR SINE MIR -124 138 52 22 35 0 0 chr5 23588180 23588209 -176041941 + AT_rich Low_complexity Low_complexity 1 29 0 274 190 0 0 chr5 23588687 23588745 -176041405 + L1MEc LINE L1 1836 1893 -4714 259 214 0 0 chr5 23588839 23588895 -176041255 + L1MB1 LINE L1 5901 5956 -212 270 316 34 28 chr5 23588900 23589077 -176041073 - L1MEc LINE L1 -4225 2171 1994 624 131 36 20 chr5 23589270 23589529 -176040621 + (TA)n Simple_repeat Simple_repeat 1 263 0 225 175 0 32 chr5 23589531 23589594 -176040556 + L1MEc LINE L1 2004 2064 -4362 309 169 14 28 chr5 23589622 23589693 -176040457 + L1MEc LINE L1 1998 2067 -4359 308 245 32 53 chr5 23589648 23589742 -176040408 - L1MC4 LINE L1 -1339 6703 6612 * 348 206 0 82 chr5 23589741 23589838 -176040312 + L1MC4 LINE L1 6614 6702 -1340 322 274 0 60 chr5 23589771 23589888 -176040262 - L1MC4 LINE L1 -1338 6704 6595 * 297 105 76 9 chr5 23589897 23590002 -176040148 + (TA)n Simple_repeat Simple_repeat 1 112 0 510 119 60 12 chr5 23590041 23590209 -176039941 + (TA)n Simple_repeat Simple_repeat 1 176 0 238 253 24 0 chr5 23590239 23590322 -176039828 - L1MC4 LINE L1 -1343 6699 6615 * 240 202 107 12 chr5 23590251 23590335 -176039815 + L1MC4 LINE L1 6614 6705 -1337 203 211 0 14 chr5 23590335 23590406 -176039744 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 1224 144 0 0 chr5 23590406 23590579 -176039571 - AluSq SINE Alu -140 173 1 418 316 66 60 chr5 23590626 23591335 -176038815 - L1M4c LINE L1 -4634 1750 1035 7950 94 11 22 chr5 23591335 23593363 -176036787 - L1PA7 LINE L1 -1 6153 4159 31 44 0 0 chr5 23593401 23593446 -176036704 + AT_rich Low_complexity Low_complexity 1 45 0 236 62 92 46 chr5 23593640 23593705 -176036445 + (TATAA)n Simple_repeat Simple_repeat 5 72 0 905 231 34 4 chr5 23593705 23593943 -176036207 - L1MC3 LINE L1 -61 7724 7480 2824 164 37 6 chr5 23594039 23594521 -176035629 - LOR1a LTR ERV1 0 497 1 572 152 0 11 chr5 23594521 23594613 -176035537 - LOR1a-int LTR ERV1 0 8120 8030 * 5917 136 7 8 chr5 23594612 23595556 -176034594 - LOR1-int LTR ERV1 -2056 6064 5122 14739 127 50 10 chr5 23595572 23598598 -176031552 - LOR1-int LTR ERV1 -3898 4222 1003 2124 109 22 0 chr5 23598598 23598909 -176031241 - L1PA6 LINE L1 -6 6148 5831 14739 127 50 10 chr5 23598909 23599306 -176030844 - LOR1-int LTR ERV1 -7117 1003 623 234 67 0 0 chr5 23599306 23599336 -176030814 - 5S rRNA rRNA -40 81 52 267 378 21 59 chr5 23599495 23599733 -176030417 + MER115 DNA AcHobo 329 557 -136 2304 100 0 3 chr5 23599755 23600054 -176030096 + AluSg SINE Alu 13 310 0 254 269 106 0 chr5 23600091 23600195 -176029955 + Zaphod DNA AcHobo 3917 4031 0 251 266 25 0 chr5 23601020 23601099 -176029051 + (TA)n Simple_repeat Simple_repeat 2 82 0 1948 118 3 24 chr5 23601143 23601473 -176028677 + AluSx SINE Alu 1 324 0 22 80 0 0 chr5 23602386 23602436 -176027714 + AT_rich Low_complexity Low_complexity 1 50 0 233 329 14 70 chr5 23602792 23602935 -176027215 - MIR3 SINE MIR -5 203 69 209 33 33 0 chr5 23604113 23604143 -176026007 + (TTTTTG)n Simple_repeat Simple_repeat 1 31 0 776 301 82 43 chr5 23604375 23604813 -176025337 - MLT1H1 LTR MaLR -1 554 100 194 0 39 0 chr5 23605363 23605389 -176024761 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 921 107 7 7 chr5 23605644 23605784 -176024366 + AluSp/q SINE Alu 168 307 -6 2161 113 0 3 chr5 23605788 23606089 -176024061 + AluSg SINE Alu 3 302 -8 272 217 0 72 chr5 23606092 23606175 -176023975 - L1M4 LINE L1 -1247 4899 4823 5144 262 58 54 chr5 23606185 23606917 -176023233 - L1M4 LINE L1 -1528 4618 3890 249 111 0 0 chr5 23606917 23606953 -176023197 - tRNA-Arg-AGA tRNA tRNA -40 36 1 5144 262 58 54 chr5 23606953 23608549 -176021601 - L1M4 LINE L1 -2256 3890 2246 297 0 0 0 chr5 23608550 23608583 -176021567 + (TG)n Simple_repeat Simple_repeat 1 33 0 628 192 8 0 chr5 23608599 23608724 -176021426 - L1MCa LINE L1 -5414 1012 887 183 80 0 0 chr5 23608940 23608965 -176021185 + (TG)n Simple_repeat Simple_repeat 1 25 0 4855 189 32 24 chr5 23609123 23609646 -176020504 - L1MC1 LINE L1 -7 6326 5809 891 222 102 68 chr5 23609646 23610029 -176020121 + MSTD LTR MaLR 1 396 0 4855 189 32 24 chr5 23610029 23610564 -176019586 - L1MC1 LINE L1 -524 5809 5259 1976 140 50 20 chr5 23610677 23611019 -176019131 - THE1B LTR MaLR -12 352 1 2824 204 22 22 chr5 23611044 23611636 -176018514 - L1MCa LINE L1 -5815 611 20 683 24 0 0 chr5 23613165 23613249 -176016901 + L1PA3 LINE L1 6067 6150 -5 272 48 24 0 chr5 23613260 23613302 -176016848 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 28 0 0 0 chr5 23614423 23614451 -176015699 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 23615724 23615751 -176014399 + AT_rich Low_complexity Low_complexity 1 27 0 11217 101 10 1 chr5 23615752 23618169 -176011981 - L1PA7 LINE L1 -1 6153 3752 21 0 0 0 chr5 23618388 23618409 -176011741 + AT_rich Low_complexity Low_complexity 1 21 0 34 0 0 0 chr5 23618630 23618664 -176011486 + AT_rich Low_complexity Low_complexity 1 34 0 1999 127 10 16 chr5 23618691 23619005 -176011145 + AluSx SINE Alu 1 312 0 27 73 0 0 chr5 23619108 23619163 -176010987 + AT_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr5 23619473 23619495 -176010655 + AT_rich Low_complexity Low_complexity 1 22 0 435 252 43 0 chr5 23619618 23619733 -176010417 + MER110A LTR ERV1 1 120 -348 215 69 17 52 chr5 23619770 23619828 -176010322 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 193 45 23 68 chr5 23619833 23619877 -176010273 + (TAAAAA)n Simple_repeat Simple_repeat 6 47 0 24 53 0 0 chr5 23619883 23619921 -176010229 + AT_rich Low_complexity Low_complexity 1 38 0 1568 241 70 42 chr5 23620031 23620532 -176009618 - MLT1E2 LTR MaLR -65 561 47 1741 137 17 37 chr5 23620550 23620978 -176009172 - Charlie3 DNA MER1_type 0 2711 6 21 36 0 0 chr5 23622863 23622891 -176007259 + AT_rich Low_complexity Low_complexity 1 28 0 186 354 89 0 chr5 23622891 23622970 -176007180 - L2 LINE L2 -48 3265 3180 296 333 21 28 chr5 23623246 23623387 -176006763 - L2 LINE L2 -468 2846 2707 439 252 37 133 chr5 23623445 23623663 -176006487 + MIR SINE MIR 29 225 -37 765 199 182 72 chr5 23623663 23624262 -176005888 + MER4C LTR ERV1 1 457 -8 2033 123 3 0 chr5 23624458 23624780 -176005370 + AluSp SINE Alu 1 323 0 24 32 0 0 chr5 23625394 23625425 -176004725 + AT_rich Low_complexity Low_complexity 1 31 0 270 0 0 0 chr5 23625748 23625778 -176004372 + (GA)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr5 23627145 23627168 -176002982 + AT_rich Low_complexity Low_complexity 1 23 0 574 311 151 33 chr5 23627724 23628041 -176002109 - MLT1G LTR MaLR 0 590 312 219 36 0 0 chr5 23628041 23628069 -176002081 + (GA)n Simple_repeat Simple_repeat 1 28 0 574 311 151 33 chr5 23628069 23628305 -176001845 - MLT1G LTR MaLR -278 312 1 338 273 55 42 chr5 23628860 23629025 -176001125 - MLT1D LTR MaLR -321 184 18 28 0 0 0 chr5 23629535 23629563 -176000587 + AT_rich Low_complexity Low_complexity 1 28 0 190 308 0 0 chr5 23630182 23630234 -175999916 - MIR SINE MIR -121 141 90 3266 188 35 23 chr5 23631290 23632042 -175998108 + L1MA10 LINE L1 5565 6325 -9 339 352 34 22 chr5 23632129 23632308 -175997842 - L2 LINE L2 -499 2815 2635 222 171 0 0 chr5 23632396 23632437 -175997713 + GA-rich Low_complexity Low_complexity 4 44 0 468 226 54 73 chr5 23632974 23633178 -175996972 - L1ME2 LINE L1 -10 6154 5955 2521 281 77 42 chr5 23633185 23633290 -175996860 - L1ME2 LINE L1 -913 5233 5133 1327 184 35 42 chr5 23633290 23633578 -175996572 - AluJb SINE Alu -22 290 5 2521 281 77 42 chr5 23633578 23634302 -175995848 - L1ME2 LINE L1 -1013 5133 4435 1931 167 11 35 chr5 23634302 23634673 -175995477 + THE1B LTR MaLR 3 364 0 10320 121 17 3 chr5 23634673 23636231 -175993919 + THE1B-int LTR MaLR 1 1580 0 1900 165 19 32 chr5 23636231 23636600 -175993550 + THE1B LTR MaLR 1 364 0 2521 281 77 42 chr5 23636600 23637466 -175992684 - L1ME2 LINE L1 -1710 4436 3477 373 256 144 26 chr5 23637556 23637751 -175992399 - L1MDb LINE L1 -2456 4188 3971 1387 250 66 50 chr5 23637912 23638209 -175991941 - L1M4 LINE L1 -3242 3402 3111 389 36 18 0 chr5 23638209 23638264 -175991886 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 1387 250 66 50 chr5 23638264 23638661 -175991489 - L1M4 LINE L1 -3533 3111 2697 511 77 26 0 chr5 23640130 23640208 -175989942 + MADE1 DNA Mariner 1 80 0 2352 74 7 3 chr5 23640320 23640629 -175989521 + AluY SINE Alu 1 310 -1 238 183 32 32 chr5 23640761 23640854 -175989296 + (TA)n Simple_repeat Simple_repeat 2 94 0 26 50 0 0 chr5 23640916 23640956 -175989194 + AT_rich Low_complexity Low_complexity 1 40 0 808 213 0 0 chr5 23640956 23641106 -175989044 - FRAM SINE Alu -16 150 1 905 112 0 0 chr5 23641445 23641570 -175988580 - THE1B LTR MaLR -4 360 236 207 111 0 28 chr5 23641699 23641735 -175988415 + (TC)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr5 23642471 23642491 -175987659 + (TTA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr5 23642933 23642954 -175987196 + AT_rich Low_complexity Low_complexity 1 21 0 1598 231 69 9 chr5 23643083 23643503 -175986647 + MLT1C LTR MaLR 17 461 -6 21 0 0 0 chr5 23645662 23645683 -175984467 + AT_rich Low_complexity Low_complexity 1 21 0 469 288 88 65 chr5 23645702 23646240 -175983910 - L1M4 LINE L1 -5720 926 142 307 100 0 67 chr5 23646240 23646300 -175983850 - L1PA3 LINE L1 -1 6154 6099 469 288 88 65 chr5 23646300 23646439 -175983711 - L1M4 LINE L1 -6504 142 8 287 289 26 0 chr5 23646450 23646526 -175983624 - L1MDb LINE L1 -3393 3251 3174 215 211 18 18 chr5 23646548 23646605 -175983545 + (TA)n Simple_repeat Simple_repeat 2 58 0 1676 275 90 26 chr5 23646675 23647877 -175982273 - L1MDb LINE L1 -3515 3129 1839 854 230 108 26 chr5 23647891 23648371 -175981779 - L1MDb LINE L1 -4859 1785 1255 261 316 40 67 chr5 23648885 23649110 -175981040 - L1MDb LINE L1 -6307 337 119 22 0 0 0 chr5 23649110 23649132 -175981018 + AT_rich Low_complexity Low_complexity 1 22 0 235 286 19 9 chr5 23649182 23649287 -175980863 - L1MEc LINE L1 -5273 1123 1018 4186 167 15 1 chr5 23649289 23650027 -175980123 - L1PA16 LINE L1 -4 6162 5415 24 32 0 0 chr5 23650033 23650064 -175980086 + AT_rich Low_complexity Low_complexity 1 31 0 6677 257 64 32 chr5 23650080 23653885 -175976265 - L1MB3 LINE L1 -2 6417 2464 331 113 0 16 chr5 23653885 23653947 -175976203 - L1PA11 LINE L1 -1 6173 6113 6677 257 64 32 chr5 23653947 23654306 -175975844 - L1MB3 LINE L1 -3955 2464 2118 416 121 30 0 chr5 23654311 23654377 -175975773 - MADE1 DNA Mariner 0 80 13 870 231 11 16 chr5 23654386 23654572 -175975578 - L1MB3 LINE L1 -5758 626 442 370 289 36 6 chr5 23654609 23654775 -175975375 - L1MEc LINE L1 -6218 178 8 182 88 0 29 chr5 23654864 23654898 -175975252 + (TA)n Simple_repeat Simple_repeat 1 33 0 502 333 128 10 chr5 23655037 23655334 -175974816 + LTR16B LTR ERVL 8 339 -125 1478 241 88 8 chr5 23655995 23656463 -175973687 - MLT1D LTR MaLR 0 505 1 1728 224 15 27 chr5 23657652 23658058 -175972092 - MSTB2 LTR MaLR -53 404 4 30 27 0 0 chr5 23658090 23658127 -175972023 + AT_rich Low_complexity Low_complexity 1 37 0 182 305 17 17 chr5 23658277 23658336 -175971814 + MER5A DNA MER1_type 130 188 -1 22 35 0 0 chr5 23659352 23659381 -175970769 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 23659662 23659684 -175970466 + AT_rich Low_complexity Low_complexity 1 22 0 217 260 60 40 chr5 23659757 23659857 -175970293 - MIR SINE MIR -87 175 74 2014 132 0 4 chr5 23660035 23660315 -175969835 - AluSx SINE Alu -33 279 1 326 198 31 52 chr5 23662201 23662297 -175967853 + MER105 DNA DNA 106 199 -5 2380 80 0 0 chr5 23662862 23663163 -175966987 + AluSq SINE Alu 2 302 -11 26 74 0 0 chr5 23663279 23663333 -175966817 + AT_rich Low_complexity Low_complexity 1 54 0 1464 185 10 27 chr5 23663613 23663911 -175966239 - AluJb SINE Alu -19 293 1 21 0 0 0 chr5 23663948 23663969 -175966181 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 23665353 23665391 -175964759 + AT_rich Low_complexity Low_complexity 1 38 0 396 280 70 13 chr5 23665803 23665960 -175964190 - MIR SINE MIR -2 260 95 1331 201 177 14 chr5 23665960 23666328 -175963822 - MSTA LTR MaLR 0 428 1 8954 156 9 37 chr5 23666328 23667952 -175962198 - MSTA-int LTR MaLR 0 1580 3 1609 178 169 16 chr5 23667954 23668323 -175961827 - MSTA LTR MaLR 0 428 4 185 409 131 10 chr5 23668780 23669093 -175961057 + L2 LINE L2 2584 2934 -380 2034 112 0 0 chr5 23669111 23669389 -175960761 - AluSq SINE Alu 0 313 36 203 162 0 0 chr5 23669983 23670020 -175960130 + A-rich Low_complexity Low_complexity 4 40 0 1936 160 0 0 chr5 23670066 23670354 -175959796 + AluSx SINE Alu 3 290 -22 4920 99 27 4 chr5 23670578 23671323 -175958827 + MER4E LTR ERV1 1 762 -4 1926 132 7 7 chr5 23671327 23671623 -175958527 + MER4E-int LTR ERV1 1 296 -6462 1498 122 262 9 chr5 23671623 23671959 -175958191 + MER4E-int LTR ERV1 752 1172 -5586 2814 150 107 29 chr5 23671970 23672631 -175957519 + MER4E-int LTR ERV1 940 1652 -3363 376 221 7 36 chr5 23672660 23672809 -175957341 - pTR5 LTR ERV1 -95 685 37 1358 118 68 18 chr5 23673236 23673328 -175956822 + MER4E-int LTR ERV1 1671 1757 -5001 1747 65 12 29 chr5 23673328 23673574 -175956576 - AluY SINE Alu -7 304 63 1358 118 68 18 chr5 23673574 23673761 -175956389 + MER4E-int LTR ERV1 1757 1964 -4794 3826 137 37 3 chr5 23673772 23674371 -175955779 + LTR9B LTR ERV1 26 644 0 5252 141 54 31 chr5 23674374 23675484 -175954666 + MER4E-int LTR ERV1 1961 3095 -3663 3507 134 36 67 chr5 23675484 23676155 -175953995 + MER4E-int LTR ERV1 3439 4088 -2670 * 7557 131 44 19 chr5 23676154 23678141 -175952009 + MER4E-int LTR ERV1 4452 6645 -113 5181 89 27 7 chr5 23678990 23679741 -175950409 + MER4E LTR ERV1 1 766 0 506 311 120 78 chr5 23680103 23680285 -175949865 + L2 LINE L2 1128 1301 -2012 1020 79 0 48 chr5 23680285 23680474 -175949676 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 506 311 120 78 chr5 23680474 23680490 -175949660 + L2 LINE L2 1301 1315 -1998 695 209 0 0 chr5 23680490 23680619 -175949531 - FLAM_A SINE Alu -4 129 1 506 311 120 78 chr5 23680619 23681374 -175948776 + L2 LINE L2 1315 3240 -73 26 0 0 0 chr5 23681391 23681417 -175948733 + AT_rich Low_complexity Low_complexity 1 26 0 2120 94 14 0 chr5 23681505 23681792 -175948358 + AluSc SINE Alu 1 291 -18 2193 120 0 22 chr5 23681911 23682228 -175947922 + AluSg SINE Alu 1 310 0 228 286 13 0 chr5 23682281 23682358 -175947792 + L1ME LINE L1 5511 5588 -578 25 31 0 0 chr5 23682431 23682463 -175947687 + AT_rich Low_complexity Low_complexity 1 32 0 783 196 0 8 chr5 23682534 23682667 -175947483 + FAM SINE Alu 20 151 -34 21 36 0 0 chr5 23682676 23682704 -175947446 + AT_rich Low_complexity Low_complexity 1 28 0 260 284 0 0 chr5 23682710 23682777 -175947373 + GA-rich Low_complexity Low_complexity 2 68 0 1700 201 12 58 chr5 23683424 23683552 -175946598 - MLT2D LTR ERVL -2 412 280 1993 125 0 10 chr5 23683552 23683849 -175946301 + AluSg SINE Alu 9 302 -8 1700 201 12 58 chr5 23683849 23684152 -175945998 - MLT2D LTR ERVL -134 280 1 270 339 48 0 chr5 23684774 23684898 -175945252 - MIR3 SINE MIR -39 169 40 809 228 115 59 chr5 23684943 23685316 -175944834 - MSTD LTR MaLR -2 394 1 5937 182 14 18 chr5 23685851 23688155 -175941995 - L1PB2 LINE L1 0 6867 4574 6176 239 10 14 chr5 23688156 23689945 -175940205 - L1PB2 LINE L1 -2448 4414 2633 1149 283 36 3 chr5 23689935 23690296 -175939854 - L1PB2 LINE L1 -6485 378 6 * 1584 280 69 48 chr5 23690466 23691335 -175938815 - L1ME3A LINE L1 -1 6169 5283 339 335 69 28 chr5 23691383 23691601 -175938549 - L1ME3A LINE L1 -936 5210 4984 994 284 68 65 chr5 23691602 23692754 -175937396 + L1M4 LINE L1 2461 3615 -2531 356 291 57 32 chr5 23693197 23693355 -175936795 + MIR SINE MIR 101 262 0 871 234 109 7 chr5 23694985 23695288 -175934862 + MER33 DNA MER1_type 1 323 -1 440 213 44 52 chr5 23695713 23695849 -175934301 - L1MB5 LINE L1 -3 6171 6037 682 189 8 0 chr5 23695896 23696028 -175934122 + FLAM_C SINE Alu 1 133 0 1434 191 34 24 chr5 23696703 23696997 -175933153 - AluJo SINE Alu -15 297 1 927 142 186 0 chr5 23697304 23697487 -175932663 - Tigger1 DNA MER2_type 0 2418 2202 775 210 6 6 chr5 23697476 23697633 -175932517 - Tigger1 DNA MER2_type -2261 157 1 * 1762 140 29 42 chr5 23700041 23700419 -175929731 - THE1C LTR MaLR 0 375 3 232 26 0 51 chr5 23700495 23700534 -175929616 + (TA)n Simple_repeat Simple_repeat 1 37 0 1654 132 60 87 chr5 23700709 23701089 -175929061 - THE1C LTR MaLR -5 370 1 2117 110 20 0 chr5 23701385 23701677 -175928473 - AluSp SINE Alu -15 298 1 2268 117 0 0 chr5 23702448 23702756 -175927394 - AluSg SINE Alu 0 310 3 512 340 84 61 chr5 23702756 23703342 -175926808 - ERVL LTR ERVL -3792 1972 1374 490 321 28 9 chr5 23703562 23703777 -175926373 - ERVL LTR ERVL -5075 689 471 353 272 149 34 chr5 23704851 23705086 -175925064 - LTR41 LTR ERVL -510 263 2 415 318 91 56 chr5 23706226 23706906 -175923244 + L1M4 LINE L1 40 754 -5788 213 39 0 0 chr5 23706906 23706932 -175923218 + (TAA)n Simple_repeat Simple_repeat 3 28 0 415 318 91 56 chr5 23706932 23707066 -175923084 + L1M4 LINE L1 754 882 -5660 1263 277 80 48 chr5 23707165 23707889 -175922261 + L1M4 LINE L1 882 1657 -4989 2582 124 0 11 chr5 23707889 23708268 -175921882 - THE1C LTR MaLR 0 375 1 1263 277 80 48 chr5 23708268 23708711 -175921439 + L1M4 LINE L1 1657 2084 -4562 715 223 46 7 chr5 23708909 23709128 -175921022 - MER61D LTR ERV1 0 732 274 1278 123 5 30 chr5 23709130 23709333 -175920817 - THE1C LTR MaLR -177 198 1 1044 65 18 24 chr5 23709337 23709506 -175920644 - THE1C-int LTR MaLR -6 1574 1407 * 2462 146 11 3 chr5 23709488 23709858 -175920292 - THE1C-int LTR MaLR -306 1274 902 1011 221 108 0 chr5 23710816 23711047 -175919103 - MER61D-int LTR ERV1 -299 6792 6537 4224 254 26 5 chr5 23711427 23712324 -175917826 - MER61D-int LTR ERV1 -3671 3420 2505 1335 181 13 0 chr5 23712360 23712597 -175917553 - MER61D-int LTR ERV1 -4684 2407 2168 3366 264 42 53 chr5 23712630 23714247 -175915903 - MER61D-int LTR ERV1 -6015 981 39 707 199 52 36 chr5 23714264 23714476 -175915674 - MER61D LTR ERV1 -4 790 340 1011 268 29 29 chr5 23714912 23715470 -175914680 + L1M4 LINE L1 2469 2976 -3668 443 320 44 34 chr5 23716095 23716301 -175913849 + MIR SINE MIR 11 218 -44 2065 66 0 26 chr5 23717117 23717389 -175912761 - AluY SINE Alu -16 295 31 4272 115 108 42 chr5 23717389 23718160 -175911990 - LTR12 LTR ERV1 0 826 5 2084 199 33 28 chr5 23718176 23718749 -175911401 - pTR5 LTR ERV1 -1094 1344 769 259 132 89 0 chr5 23718759 23718815 -175911335 - AluY SINE Alu -254 46 1 905 130 13 0 chr5 23718818 23718972 -175911178 - L1M4c LINE L1 -4551 1833 1678 * 3477 181 16 34 chr5 23718966 23719663 -175910487 - L1M4c LINE L1 -5695 689 6 888 311 104 56 chr5 23720791 23721662 -175908488 + HAL1 LINE L1 881 1793 -714 676 47 0 85 chr5 23722095 23722224 -175907926 + AluY SINE Alu 187 306 0 242 290 0 19 chr5 23722445 23722552 -175907598 + HAL1 LINE L1 2292 2396 -111 1971 115 0 0 chr5 23723580 23723841 -175906309 + AluSx SINE Alu 2 262 -50 270 0 0 0 chr5 23723841 23723871 -175906279 + (CA)n Simple_repeat Simple_repeat 2 31 0 307 337 79 14 chr5 23724276 23724555 -175905595 + L1M4 LINE L1 2148 2444 -3702 23 54 0 0 chr5 23724852 23724889 -175905261 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr5 23725118 23725147 -175905003 + AT_rich Low_complexity Low_complexity 1 29 0 4602 162 60 10 chr5 23726201 23727346 -175902804 - L1PA15 LINE L1 0 6165 4975 3818 209 7 62 chr5 23727373 23728405 -175901745 + L1P LINE L1 2857 3831 -2315 2459 163 20 60 chr5 23728610 23728978 -175901172 - Tigger5 DNA MER2_type -5 2318 1937 2177 155 28 0 chr5 23728978 23729332 -175900818 + THE1B LTR MaLR 1 364 0 2459 163 20 60 chr5 23729332 23729395 -175900755 - Tigger5 DNA MER2_type -386 1937 1907 2214 107 3 10 chr5 23729395 23729695 -175900455 + AluSx SINE Alu 1 298 -14 2459 163 20 60 chr5 23729695 23729766 -175900384 - Tigger5 DNA MER2_type -416 1907 1835 1029 266 9 4 chr5 23729750 23729983 -175900167 - Tigger5 DNA MER2_type -2089 234 1 * 26983 139 22 74 chr5 23730332 23732759 -175897391 + L1PA8 LINE L1 10 2563 -3583 1862 140 20 3 chr5 23732759 23733051 -175897099 + AluSg SINE Alu 1 297 -13 26983 139 22 74 chr5 23733051 23734494 -175895656 + L1PA8 LINE L1 2563 3499 -2647 2137 20 8 0 chr5 23734494 23734745 -175895405 - L1PA4 LINE L1 -2 6153 5901 26983 139 22 74 chr5 23734745 23736468 -175893682 + L1PA8 LINE L1 3499 5311 -835 5513 82 48 0 chr5 23736581 23737379 -175892771 + L1PA8 LINE L1 5334 6168 0 26 0 0 0 chr5 23737424 23737450 -175892700 + AT_rich Low_complexity Low_complexity 1 26 0 1358 205 7 34 chr5 23737900 23738198 -175891952 - AluJo SINE Alu -22 290 1 3732 163 12 40 chr5 23738451 23739250 -175890900 - L1PA15 LINE L1 -7 6158 5382 2649 197 9 4 chr5 23739355 23739888 -175890262 - L1PA15 LINE L1 -1141 5005 4470 777 310 61 3 chr5 23739889 23740215 -175889935 + L2 LINE L2 1840 2184 -1130 285 232 61 0 chr5 23740505 23740587 -175889563 + L1MCa LINE L1 1522 1608 -4818 1356 196 7 22 chr5 23740617 23740888 -175889262 + AluJb SINE Alu 1 267 -45 24 0 0 0 chr5 23741195 23741219 -175888931 + AT_rich Low_complexity Low_complexity 1 24 0 25 99 0 0 chr5 23742033 23742114 -175888036 + AT_rich Low_complexity Low_complexity 1 81 0 3079 17 0 0 chr5 23743021 23743377 -175886773 - L1PA2 LINE L1 -2 6153 5798 234 192 0 0 chr5 23743585 23743637 -175886513 + CT-rich Low_complexity Low_complexity 2 53 0 21 57 0 0 chr5 23744279 23744314 -175885836 + AT_rich Low_complexity Low_complexity 1 35 0 940 106 81 6 chr5 23744500 23744661 -175885489 - L1MA2 LINE L1 -10 6294 6122 647 140 9 19 chr5 23744661 23744768 -175885382 - U6 snRNA snRNA 0 107 2 1235 243 17 14 chr5 23744769 23745119 -175885031 - L1M4 LINE L1 -442 5736 5386 1837 137 48 3 chr5 23745442 23745734 -175884416 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 23745921 23745942 -175884208 + AT_rich Low_complexity Low_complexity 1 21 0 2357 118 3 0 chr5 23746443 23746792 -175883358 + L1PA14 LINE L1 5812 6161 0 553 242 148 35 chr5 23746843 23747330 -175882820 - MER69 DNA AcHobo -35 2491 1950 275 284 62 0 chr5 23747336 23747417 -175882733 - MER69 DNA AcHobo -2433 93 8 2145 73 0 4 chr5 23747848 23748121 -175882029 + AluY SINE Alu 1 272 -39 225 315 0 0 chr5 23748373 23748503 -175881647 + (CATATA)n Simple_repeat Simple_repeat 5 134 0 376 207 72 10 chr5 23748503 23748643 -175881507 - L1MB8 LINE L1 -2 6176 6018 580 373 24 4 chr5 23749120 23749375 -175880775 - L2 LINE L2 -2486 828 569 849 321 118 51 chr5 23750283 23751053 -175879097 + L2 LINE L2 2091 2912 -402 183 290 58 14 chr5 23751270 23751339 -175878811 + L2 LINE L2 3152 3223 -90 280 312 189 33 chr5 23751462 23751795 -175878355 - L2 LINE L2 -8 3305 2921 449 333 27 5 chr5 23752225 23752411 -175877739 - MLT1J LTR MaLR -316 195 6 483 293 108 5 chr5 23752421 23752633 -175877517 - L1ME1 LINE L1 -92 6869 6636 1049 99 0 41 chr5 23752652 23752823 -175877327 - AluY SINE Alu -9 302 139 1043 266 56 0 chr5 23752826 23753130 -175877020 - L1ME1 LINE L1 -341 6620 6300 * 34539 85 62 2 chr5 23753129 23758908 -175871242 - L1PA6 LINE L1 -6 6148 11 860 212 21 13 chr5 23758923 23759289 -175870861 - L1ME1 LINE L1 -668 6293 5930 24 32 0 0 chr5 23759447 23759478 -175870672 + AT_rich Low_complexity Low_complexity 1 31 0 1352 177 53 42 chr5 23759499 23759782 -175870368 + AluSx SINE Alu 1 286 -26 1152 134 27 0 chr5 23759797 23759984 -175870166 - Tigger5 DNA MER2_type -70 2253 2062 230 195 0 0 chr5 23759983 23760024 -175870126 - Tigger5 DNA MER2_type -2262 61 21 * 4343 152 25 11 chr5 23760043 23760827 -175869323 - L1MA8 LINE L1 -68 6223 5429 1328 230 25 22 chr5 23760818 23761175 -175868975 - L1ME1 LINE L1 -1024 5917 5560 * 270 325 16 0 chr5 23761581 23761704 -175868446 + LTR33 LTR ERVL 327 451 -70 23 0 0 0 chr5 23762556 23762579 -175867571 + AT_rich Low_complexity Low_complexity 1 23 0 360 296 89 19 chr5 23762793 23763050 -175867100 - L1ME1 LINE L1 -2863 4078 3804 269 330 110 0 chr5 23763050 23763168 -175866982 + MLT1J1 LTR MaLR 1 131 -315 23 33 0 0 chr5 23764398 23764428 -175865722 + AT_rich Low_complexity Low_complexity 1 30 0 2038 251 42 20 chr5 23765668 23766258 -175863892 - LTR26 LTR ERV1 0 603 1 219 69 0 0 chr5 23766570 23766599 -175863551 + (TA)n Simple_repeat Simple_repeat 1 29 0 219 36 0 0 chr5 23766598 23766626 -175863524 + (CA)n Simple_repeat Simple_repeat 2 29 0 26 50 0 0 chr5 23766838 23766878 -175863272 + AT_rich Low_complexity Low_complexity 1 40 0 332 271 50 55 chr5 23766987 23767186 -175862964 + L1M4 LINE L1 3671 3868 -2278 22 35 0 0 chr5 23767195 23767224 -175862926 + AT_rich Low_complexity Low_complexity 1 29 0 1222 106 0 0 chr5 23767300 23767470 -175862680 + AluY SINE Alu 135 304 -7 251 258 46 62 chr5 23768100 23768260 -175861890 - L1ME1 LINE L1 -4631 2468 2159 282 222 265 8 chr5 23768834 23768951 -175861199 - LTR50 LTR ERVL -628 167 21 245 250 73 10 chr5 23768999 23769095 -175861055 - L1ME1 LINE L1 -4785 2158 2057 383 326 57 65 chr5 23769102 23769189 -175860961 - L1ME1 LINE L1 -4926 2196 2110 1930 121 10 10 chr5 23769189 23769494 -175860656 - AluY SINE Alu -6 305 1 383 326 57 65 chr5 23769494 23769777 -175860373 - L1ME1 LINE L1 -5012 2110 1829 229 285 72 25 chr5 23769872 23770149 -175860001 - L1ME1 LINE L1 -4901 1522 1230 920 181 31 84 chr5 23770997 23771223 -175858927 - MER67D LTR ERV1 -300 214 1 610 274 74 23 chr5 23771318 23771533 -175858617 - MER67D-int LTR ERV1 -111 4825 4600 1265 261 32 37 chr5 23771552 23771958 -175858192 - MER31-int LTR ERV1 -4135 801 398 2011 89 0 73 chr5 23772239 23772555 -175857595 + AluSx SINE Alu 17 309 -3 255 297 25 59 chr5 23772875 23772993 -175857157 + L2 LINE L2 3200 3313 0 1257 209 73 42 chr5 23773161 23773457 -175856693 + MER58B DNA MER1_type 1 309 -2111 1577 238 8 8 chr5 23773457 23773822 -175856328 + MLT1A1 LTR MaLR 1 365 0 1257 209 73 42 chr5 23773822 23773855 -175856295 + MER58B DNA MER1_type 309 340 -1 1960 182 91 94 chr5 23773856 23774347 -175855803 + MLT2B3 LTR ERVL 7 497 -57 473 58 14 0 chr5 23774347 23774416 -175855734 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 1960 182 91 94 chr5 23774416 23774474 -175855676 + MLT2B3 LTR ERVL 497 554 0 262 260 80 30 chr5 23774633 23774733 -175855417 + L2 LINE L2 3209 3313 0 1758 161 67 28 chr5 23776917 23777278 -175852872 - THE1C LTR MaLR 0 375 1 1425 156 22 43 chr5 23779299 23779575 -175850575 - THE1C LTR MaLR -105 270 1 545 100 18 18 chr5 23780087 23780197 -175849953 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 490 233 62 40 chr5 23780895 23781071 -175849079 - MER63A DNA MER1_type -28 182 3 22 0 0 0 chr5 23781916 23781938 -175848212 + AT_rich Low_complexity Low_complexity 1 22 0 323 296 92 34 chr5 23782415 23782621 -175847529 + HAL1 LINE L1 803 1020 -1487 2205 134 33 19 chr5 23782958 23783317 -175846833 + THE1B LTR MaLR 1 364 0 26 64 0 0 chr5 23784315 23784362 -175845788 + AT_rich Low_complexity Low_complexity 1 47 0 309 281 36 66 chr5 23784379 23784575 -175845575 + HAL1 LINE L1 2285 2474 -33 23 0 0 0 chr5 23784919 23784942 -175845208 + AT_rich Low_complexity Low_complexity 1 23 0 214 130 19 19 chr5 23785604 23785658 -175844492 + (TA)n Simple_repeat Simple_repeat 2 55 0 22 35 0 0 chr5 23786379 23786408 -175843742 + AT_rich Low_complexity Low_complexity 1 29 0 211 281 0 0 chr5 23786946 23787003 -175843147 + CT-rich Low_complexity Low_complexity 4 60 0 907 246 42 0 chr5 23787130 23787390 -175842760 - MER63C DNA MER1_type -11 919 649 857 246 21 32 chr5 23787396 23787680 -175842470 + MER63C DNA MER1_type 82 362 -568 754 264 74 0 chr5 23787693 23787909 -175842241 - MER63C DNA MER1_type -281 649 418 387 0 0 0 chr5 23787939 23787982 -175842168 + (CA)n Simple_repeat Simple_repeat 2 44 0 1023 178 171 41 chr5 23787983 23788252 -175841898 - MER7A DNA MER2_type -1 345 44 294 95 0 0 chr5 23788281 23788323 -175841827 + (TG)n Simple_repeat Simple_repeat 1 42 0 1143 204 7 3 chr5 23788341 23788604 -175841546 - MLT2D LTR ERVL -60 337 1 1134 264 19 42 chr5 23788604 23789031 -175841119 - MER63C DNA MER1_type -512 418 2 1239 251 14 38 chr5 23789625 23789996 -175840154 - MLT1A2 LTR MaLR -1 373 12 423 348 39 29 chr5 23790112 23790319 -175839831 + LTR16A LTR ERVL 128 336 -114 315 385 17 0 chr5 23790334 23790451 -175839699 + LTR16A LTR ERVL 218 336 -114 22 0 0 0 chr5 23790662 23790684 -175839466 + AT_rich Low_complexity Low_complexity 1 22 0 336 274 47 22 chr5 23791703 23791849 -175838301 + MLT2F LTR ERVL 10 159 -469 368 318 0 0 chr5 23791951 23792068 -175838082 + MLT2E LTR ERVL 532 624 -4 29 0 0 0 chr5 23792820 23792849 -175837301 + AT_rich Low_complexity Low_complexity 1 29 0 2037 144 36 28 chr5 23793119 23793479 -175836671 - THE1B LTR MaLR 0 364 2 238 314 12 24 chr5 23793596 23793765 -175836385 + (TA)n Simple_repeat Simple_repeat 2 168 0 2089 113 3 0 chr5 23793906 23794198 -175835952 + AluSg SINE Alu 2 294 -16 22 70 0 0 chr5 23794795 23794838 -175835312 + AT_rich Low_complexity Low_complexity 1 43 0 307 341 84 0 chr5 23795461 23795628 -175834522 + MLT1I LTR MaLR 5 185 -224 340 240 8 132 chr5 23795680 23795801 -175834349 + MLT1H LTR MaLR 35 172 -377 293 318 11 0 chr5 23795930 23796018 -175834132 + MLT1H LTR MaLR 304 392 -163 527 294 44 6 chr5 23796088 23796248 -175833902 - MER5A DNA MER1_type -22 167 2 21 36 0 0 chr5 23796399 23796427 -175833723 + AT_rich Low_complexity Low_complexity 1 28 0 1345 261 105 48 chr5 23796510 23796883 -175833267 - MLT1E LTR MaLR 0 593 180 2093 139 0 0 chr5 23796883 23797186 -175832964 + AluSx SINE Alu 1 303 -9 1345 261 105 48 chr5 23797186 23797334 -175832816 - MLT1E LTR MaLR -413 180 42 22 56 0 0 chr5 23797419 23797455 -175832695 + AT_rich Low_complexity Low_complexity 1 36 0 227 271 129 29 chr5 23797679 23797819 -175832331 - L1MC/D LINE L1 -1927 5881 5728 331 305 48 62 chr5 23797851 23798222 -175831928 - L1MC/D LINE L1 -2147 5661 5296 766 309 125 22 chr5 23798423 23798831 -175831319 + LTR16A LTR ERVL 1 450 0 253 241 0 0 chr5 23799022 23799076 -175831074 + MLT1H LTR MaLR 413 466 -1 291 113 0 0 chr5 23799124 23799177 -175830973 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 512 309 78 64 chr5 23799192 23799693 -175830457 - L1MEd LINE L1 -4865 1254 747 375 210 85 45 chr5 23800458 23800634 -175829516 + L1MC5 LINE L1 7473 7655 -306 285 186 106 53 chr5 23801121 23801234 -175828916 + MIR SINE MIR 36 154 -108 29 104 0 0 chr5 23801538 23801644 -175828506 + AT_rich Low_complexity Low_complexity 1 106 0 222 214 0 0 chr5 23804119 23804175 -175825975 + (TA)n Simple_repeat Simple_repeat 2 57 0 1642 219 22 124 chr5 23804611 23805113 -175825037 - L1MB8 LINE L1 0 6989 6437 946 106 88 0 chr5 23805113 23805273 -175824877 - L1MA2 LINE L1 -9 6295 6122 646 140 9 19 chr5 23805273 23805380 -175824770 - U6 snRNA snRNA 0 107 2 1642 219 22 124 chr5 23805380 23805771 -175824379 - L1MB8 LINE L1 -550 6439 6187 311 145 35 208 chr5 23805785 23805939 -175824211 - LTR45 LTR ERV1 -7 518 350 1403 198 26 51 chr5 23806234 23806701 -175823449 - L1MB8 LINE L1 -767 6190 5752 6172 271 55 20 chr5 23806707 23809519 -175820631 - L1MB8 LINE L1 -1474 5483 2622 609 290 48 55 chr5 23809747 23810181 -175819969 - L1MB8 LINE L1 -4550 2409 1979 3727 289 69 27 chr5 23810189 23811804 -175818346 - L1MB8 LINE L1 -5158 1697 11 307 366 17 47 chr5 23811814 23811899 -175818251 - MER5B DNA MER1_type -3 175 96 180 0 0 0 chr5 23811899 23811919 -175818231 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 307 366 17 47 chr5 23811919 23812005 -175818145 - MER5B DNA MER1_type -82 96 9 2011 134 0 10 chr5 23812073 23812372 -175817778 - AluSq SINE Alu -17 296 1 22 35 0 0 chr5 23813828 23813857 -175816293 + AT_rich Low_complexity Low_complexity 1 29 0 39 60 0 0 chr5 23813951 23814018 -175816132 + AT_rich Low_complexity Low_complexity 1 67 0 3684 234 78 18 chr5 23817232 23817437 -175812713 - L1MA10 LINE L1 -32 6302 6111 1286 213 49 24 chr5 23817437 23817765 -175812385 + MER1B DNA MER1_type 1 336 -1 3684 234 78 18 chr5 23817765 23819308 -175810842 - L1MA10 LINE L1 -223 6111 4433 26 0 0 0 chr5 23819688 23819714 -175810436 + AT_rich Low_complexity Low_complexity 1 26 0 1788 176 0 13 chr5 23819773 23820079 -175810071 - AluSx SINE Alu -10 302 1 26 0 0 0 chr5 23821183 23821209 -175808941 + AT_rich Low_complexity Low_complexity 1 26 0 22 56 0 0 chr5 23821591 23821627 -175808523 + AT_rich Low_complexity Low_complexity 1 36 0 183 302 129 17 chr5 23821645 23821761 -175808389 + MIR SINE MIR 134 262 0 23 0 0 0 chr5 23822901 23822924 -175807226 + AT_rich Low_complexity Low_complexity 1 23 0 368 248 29 29 chr5 23823258 23823386 -175806764 - MER45A DNA AcHobo -22 156 30 1571 274 133 55 chr5 23823386 23823737 -175806413 + L1MD1 LINE L1 3555 3877 -2365 2199 115 0 0 chr5 23823737 23824042 -175806108 + AluSg SINE Alu 1 305 -5 1571 274 133 55 chr5 23824042 23825720 -175804430 + L1MD1 LINE L1 3877 5423 -819 2214 78 0 7 chr5 23825720 23826034 -175804116 - AluY SINE Alu 0 312 1 1571 274 133 55 chr5 23826034 23826180 -175803970 + L1MD1 LINE L1 5423 5556 -686 1790 150 150 5 chr5 23826180 23826554 -175803596 + MSTA LTR MaLR 1 428 0 1571 274 133 55 chr5 23826554 23826731 -175803419 + L1MD1 LINE L1 5556 6214 -28 180 97 0 0 chr5 23828230 23828261 -175801889 + (TG)n Simple_repeat Simple_repeat 2 32 0 624 213 24 0 chr5 23828778 23828905 -175801245 - MLT1D LTR MaLR -7 498 369 466 341 68 38 chr5 23829596 23829965 -175800185 + HAL1 LINE L1 780 1159 -1348 1876 141 36 28 chr5 23830355 23830716 -175799434 - THE1B LTR MaLR 0 364 1 9765 106 4 0 chr5 23830716 23832070 -175798080 - THE1B-int LTR MaLR 0 1580 222 1305 157 30 30 chr5 23832070 23832332 -175797818 - THE1A LTR MaLR -93 262 1 22 56 0 0 chr5 23832372 23832408 -175797742 + AT_rich Low_complexity Low_complexity 1 36 0 405 318 123 45 chr5 23832645 23833026 -175797124 + HAL1b LINE L1 438 848 -500 2146 198 74 2 chr5 23833079 23833523 -175796627 - MER31A LTR ERV1 -9 476 1 356 272 89 16 chr5 23834435 23834626 -175795524 + L1M4 LINE L1 4357 4561 -1585 981 169 13 0 chr5 23834629 23834783 -175795367 + MER70B LTR ERVL 4 159 -419 246 284 14 0 chr5 23834918 23834992 -175795158 - MLT1J LTR MaLR 0 511 437 1780 175 43 6 chr5 23834999 23835324 -175794826 - MER2 DNA MER2_type -6 339 3 497 324 61 44 chr5 23835378 23835721 -175794429 - MLT1J LTR MaLR -145 366 18 253 143 0 0 chr5 23835814 23835856 -175794294 + MLT1B LTR MaLR 1 42 -348 989 188 0 90 chr5 23835862 23836085 -175794065 + MLT1B LTR MaLR 188 390 0 1911 122 30 3 chr5 23836544 23836848 -175793302 - AluSx SINE Alu 0 312 1 27 0 0 0 chr5 23836987 23837014 -175793136 + AT_rich Low_complexity Low_complexity 1 27 0 32 0 0 0 chr5 23837664 23837696 -175792454 + AT_rich Low_complexity Low_complexity 1 32 0 29 70 0 0 chr5 23837811 23837868 -175792282 + AT_rich Low_complexity Low_complexity 1 57 0 23 86 0 0 chr5 23839467 23839525 -175790625 + AT_rich Low_complexity Low_complexity 1 58 0 23 0 0 0 chr5 23839630 23839653 -175790497 + AT_rich Low_complexity Low_complexity 1 23 0 183 162 0 0 chr5 23841254 23841291 -175788859 + A-rich Low_complexity Low_complexity 1 37 0 7062 219 97 13 chr5 23842518 23844136 -175786014 + L1MA7 LINE L1 11 1764 -5085 3696 213 50 22 chr5 23844132 23844842 -175785308 + L1MA7 LINE L1 5478 6166 -827 * 1996 117 0 38 chr5 23844842 23845158 -175784992 + AluSx SINE Alu 3 306 -6 3696 213 50 22 chr5 23845158 23845909 -175784241 + L1MA7 LINE L1 6166 6989 -4 30 27 0 0 chr5 23846620 23846657 -175783493 + AT_rich Low_complexity Low_complexity 1 37 0 2098 178 21 0 chr5 23847464 23847846 -175782304 - MLT1B LTR MaLR 0 390 1 369 288 23 0 chr5 23848431 23848563 -175781587 + (TATG)n Simple_repeat Simple_repeat 1 135 0 239 154 46 15 chr5 23848750 23848890 -175781260 + (TA)n Simple_repeat Simple_repeat 1 144 0 254 215 0 15 chr5 23850361 23850426 -175779724 + (TA)n Simple_repeat Simple_repeat 1 64 0 410 153 15 38 chr5 23850464 23850595 -175779555 + (TA)n Simple_repeat Simple_repeat 1 128 0 259 253 67 0 chr5 23850727 23850802 -175779348 + L1MEd LINE L1 1161 1240 -4879 4361 128 28 1 chr5 23850820 23851532 -175778618 + L1MA3 LINE L1 5567 6297 -8 25 0 0 0 chr5 23851534 23851559 -175778591 + AT_rich Low_complexity Low_complexity 1 25 0 231 177 16 16 chr5 23851564 23851626 -175778524 + T-rich Low_complexity Low_complexity 4 65 0 1248 263 129 16 chr5 23851897 23852595 -175777555 + L1MC/D LINE L1 4967 5739 -743 564 223 48 37 chr5 23852916 23853104 -175777046 + L1MC3 LINE L1 6915 7104 -681 357 162 0 44 chr5 23853113 23853181 -175776969 + MLT1F1 LTR MaLR 51 115 -452 1789 249 19 36 chr5 23853196 23853771 -175776379 + L1MD3 LINE L1 7430 7994 -1 26 0 0 0 chr5 23854284 23854310 -175775840 + AT_rich Low_complexity Low_complexity 1 26 0 284 310 9 43 chr5 23854573 23854689 -175775461 - HERV16 LTR ERVL -2056 3429 3318 1758 175 27 64 chr5 23855138 23855544 -175774606 - MER41D LTR ERV1 -11 546 156 345 88 0 128 chr5 23855635 23855737 -175774413 - MER41D LTR ERV1 -468 89 1 363 304 0 0 chr5 23855737 23855839 -175774311 - MER41D-int LTR ERV1 -4 5942 5841 2151 239 11 2 chr5 23855908 23856384 -175773766 - MER66-int LTR ERV1 -79 6597 6118 1275 157 18 27 chr5 23856872 23857095 -175773055 - MER66-int LTR ERV1 -1848 4828 4608 607 141 20 0 chr5 23857107 23857206 -175772944 - MER49 LTR ERV1 -208 715 615 * 1150 178 24 55 chr5 23857190 23857482 -175772668 - MER49 LTR ERV1 -633 290 8 1181 182 24 99 chr5 23857484 23857873 -175772277 - MER49-int LTR ERV1 0 7097 6379 561 150 196 0 chr5 23857873 23858003 -175772147 - MER49-int LTR ERV1 -624 6134 3950 727 168 10 117 chr5 23858183 23858380 -175771770 - MER49-int LTR ERV1 -4158 3962 3787 369 247 59 32 chr5 23858570 23858759 -175771391 - MER49-int LTR ERV1 -2136 4177 2607 * 705 180 86 36 chr5 23858753 23858975 -175771175 - MER41D-int LTR ERV1 -2635 3963 3731 644 183 11 63 chr5 23859008 23859183 -175770967 - MER41D-int LTR ERV1 -2869 3729 3564 1423 102 0 158 chr5 23859190 23859493 -175770657 - MER41D-int LTR ERV1 -6077 2043 1808 4059 155 4 1 chr5 23859493 23860176 -175769974 - L1PA15 LINE L1 0 6165 5481 1423 102 0 158 chr5 23860176 23860246 -175769904 - MER41D-int LTR ERV1 -6312 1808 1729 639 217 14 0 chr5 23860663 23860801 -175769349 - MER41D-int LTR ERV1 -6473 1647 1508 314 194 0 14 chr5 23860806 23860878 -175769272 - HERV16 LTR ERVL -4611 732 662 1888 73 12 0 chr5 23860879 23861138 -175769012 + L1PA5 LINE L1 5893 6154 0 1368 109 0 0 chr5 23861153 23861337 -175768813 + AluSg/x SINE Alu 129 312 0 1017 148 15 64 chr5 23861337 23861539 -175768611 - Tigger2a DNA MER2_type -242 192 1 363 118 10 88 chr5 23861545 23861647 -175768503 - L1 LINE L1 -1737 4409 4316 2044 160 0 0 chr5 23861673 23861973 -175768177 + AluSx SINE Alu 3 302 -10 464 177 0 0 chr5 23862271 23862350 -175767800 - AluJ/FRAM SINE Alu -15 297 219 1289 139 0 0 chr5 23862381 23862575 -175767575 - HERV16 LTR ERVL -4719 624 431 332 254 39 147 chr5 23862932 23863239 -175766911 - MER41D-int LTR ERV1 -7368 388 115 3502 145 2 19 chr5 23863368 23863934 -175766216 - MER41D LTR ERV1 -1 556 1 231 36 0 0 chr5 23864004 23864032 -175766118 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 509 298 13 13 chr5 23864048 23864206 -175765944 - HERV16 LTR ERVL -3826 1170 1013 253 390 7 0 chr5 23864616 23864752 -175765398 - HERV16 LTR ERVL -4380 616 480 2224 121 0 9 chr5 23865117 23865432 -175764718 - AluSx SINE Alu 0 312 1 307 315 24 0 chr5 23865526 23865653 -175764497 - LTR16C LTR ERVL -5 486 357 2172 102 7 13 chr5 23865858 23866163 -175763987 + AluY SINE Alu 1 303 -8 1231 214 8 0 chr5 23866223 23866457 -175763693 + AluJo SINE Alu 16 251 -61 1047 108 0 0 chr5 23866601 23866749 -175763401 - L1PA11 LINE L1 -3 6171 6024 22 35 0 0 chr5 23867389 23867418 -175762732 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 23868910 23868938 -175761212 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 23869500 23869528 -175760622 + AT_rich Low_complexity Low_complexity 1 28 0 195 100 0 0 chr5 23869578 23869608 -175760542 + (TA)n Simple_repeat Simple_repeat 2 31 0 270 0 0 0 chr5 23869629 23869659 -175760491 + (CA)n Simple_repeat Simple_repeat 1 30 0 1461 219 67 6 chr5 23869834 23870190 -175759960 + MLT1B LTR MaLR 13 390 0 500 294 65 45 chr5 23870660 23870997 -175759153 + MLT1L LTR MaLR 180 523 -92 27 0 0 0 chr5 23871004 23871031 -175759119 + AT_rich Low_complexity Low_complexity 1 27 0 339 164 0 0 chr5 23871031 23871092 -175759058 + (CA)n Simple_repeat Simple_repeat 2 62 0 201 322 11 11 chr5 23871201 23871291 -175758859 - MIR SINE MIR -56 206 117 2103 279 45 54 chr5 23871782 23872728 -175757422 + L1MEc LINE L1 44 981 -5415 792 292 64 8 chr5 23872833 23873083 -175757067 + LTR40b LTR ERVL 1 264 -198 2288 197 62 6 chr5 23873084 23873566 -175756584 - LTR22 LTR ERVK 0 509 1 2540 157 7 7 chr5 23873637 23874063 -175756087 - MSTA LTR MaLR -2 426 1 574 202 31 16 chr5 23874074 23874203 -175755947 + LTR40b LTR ERVL 332 462 0 1927 178 125 8 chr5 23874293 23874676 -175755474 + MSTA LTR MaLR 1 428 0 8147 169 19 48 chr5 23874678 23875477 -175754673 + MSTA-int LTR MaLR 3 824 -756 2078 104 4 7 chr5 23875477 23875757 -175754393 + AluSc SINE Alu 3 281 -28 261 57 0 0 chr5 23875757 23875792 -175754358 + (CA)n Simple_repeat Simple_repeat 2 36 0 8147 169 19 48 chr5 23875792 23876608 -175753542 + MSTA-int LTR MaLR 822 1571 -9 1485 202 161 8 chr5 23876618 23876984 -175753166 + MSTA LTR MaLR 5 426 -2 749 274 5 11 chr5 23877492 23877678 -175752472 + HERVL40 LTR ERVL 627 811 -4719 329 264 84 7 chr5 23877688 23877843 -175752307 + L1MEc LINE L1 1295 1461 -4935 836 190 178 30 chr5 23877844 23878113 -175752037 + LTR48 LTR ERV1 1 309 -478 445 231 114 78 chr5 23878123 23878438 -175751712 + LTR48 LTR ERV1 245 771 -16 325 341 63 33 chr5 23878460 23879061 -175751089 + L1MEc LINE L1 1470 2088 -4308 1309 150 63 0 chr5 23879069 23879276 -175750874 - Tigger7 DNA MER2_type -484 221 2 2440 188 24 17 chr5 23879276 23879819 -175750331 + L1MA10 LINE L1 5781 6327 -7 1566 272 48 6 chr5 23879822 23880574 -175749576 + L1MEc LINE L1 2116 2854 -3361 2849 6 0 3 chr5 23881321 23881633 -175748517 - AluY SINE Alu 0 311 1 829 167 87 66 chr5 23881683 23881891 -175748259 + L1MA7 LINE L1 5127 5351 -817 2273 91 3 3 chr5 23881891 23882199 -175747951 + AluY SINE Alu 1 308 -3 829 167 87 66 chr5 23882199 23882350 -175747800 + L1MA7 LINE L1 5351 5497 -671 790 173 8 0 chr5 23882375 23882508 -175747642 - MSTB LTR MaLR -291 135 2 3299 209 31 3 chr5 23882508 23883286 -175746864 + L1MA7 LINE L1 5492 6291 0 272 313 39 55 chr5 23883855 23884037 -175746113 - MLT1I LTR MaLR -130 279 101 654 182 5 143 chr5 23885357 23885566 -175744584 + MER20 DNA MER1_type 3 182 -37 28 0 0 0 chr5 23885577 23885605 -175744545 + AT_rich Low_complexity Low_complexity 1 28 0 223 252 178 56 chr5 23885759 23885866 -175744284 - MIR SINE MIR -30 232 113 890 223 28 98 chr5 23886272 23886723 -175743427 + MLT1A1 LTR MaLR 1 394 -2 245 234 63 81 chr5 23887321 23887432 -175742718 + LTR50 LTR ERVL 11 119 -676 248 348 22 11 chr5 23887606 23887698 -175742452 + LTR50 LTR ERVL 426 518 -277 1577 323 119 33 chr5 23887712 23887957 -175742193 - L2 LINE L2 -14 3299 3077 2241 109 0 3 chr5 23887957 23888259 -175741891 - AluSc SINE Alu -8 301 1 1577 323 119 33 chr5 23888259 23889094 -175741056 - L2 LINE L2 -236 3077 2135 763 224 19 0 chr5 23889983 23890144 -175740006 - FRAM SINE Alu -2 174 11 378 194 19 3 chr5 23890150 23890231 -175739919 - AluJ/FLAM SINE Alu -239 63 2 28 48 0 0 chr5 23890523 23890565 -175739585 + AT_rich Low_complexity Low_complexity 1 42 0 484 298 10 47 chr5 23890637 23890924 -175739226 + MLT1H LTR MaLR 43 422 -127 2714 238 32 6 chr5 23891020 23891709 -175738441 - L1MB4 LINE L1 -2 6178 5472 922 237 59 37 chr5 23891741 23892062 -175738088 - L1MB4 LINE L1 -3382 2764 2437 28 29 0 0 chr5 23893130 23893165 -175736985 + AT_rich Low_complexity Low_complexity 1 35 0 233 204 20 0 chr5 23893575 23893624 -175736526 + GA-rich Low_complexity Low_complexity 3 52 0 213 355 159 16 chr5 23893627 23893816 -175736334 + MIR SINE MIR 36 251 -11 428 283 126 28 chr5 23894442 23894695 -175735455 - L1ME3A LINE L1 -83 6087 5860 2093 150 25 11 chr5 23894695 23895054 -175735096 + THE1B LTR MaLR 1 364 0 428 283 126 28 chr5 23895054 23895337 -175734813 - L1ME3A LINE L1 -310 5860 5465 1863 162 0 0 chr5 23895566 23895868 -175734282 + AluSx SINE Alu 11 312 0 1929 168 41 27 chr5 23896822 23896995 -175733155 + LTR57 LTR ERVL 1 170 -241 462 36 0 0 chr5 23896995 23897051 -175733099 + (CA)n Simple_repeat Simple_repeat 1 56 0 1929 168 41 27 chr5 23897051 23897246 -175732904 + LTR57 LTR ERVL 170 374 -37 186 43 0 0 chr5 23897246 23897269 -175732881 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 10092 130 41 43 chr5 23897301 23898225 -175731925 + LTR57-int LTR ERVL 2 926 -4417 306 0 0 0 chr5 23898225 23898259 -175731891 + (TG)n Simple_repeat Simple_repeat 2 35 0 10092 130 41 43 chr5 23898259 23898986 -175731164 + LTR57-int LTR ERVL 926 1652 -3691 378 0 0 0 chr5 23898986 23899028 -175731122 + (TG)n Simple_repeat Simple_repeat 1 42 0 10092 130 41 43 chr5 23899028 23899208 -175730942 + LTR57-int LTR ERVL 1652 1831 -3512 * 10748 151 29 4 chr5 23899194 23901442 -175728708 + LTR57-int LTR ERVL 2626 4990 -353 2154 142 27 3 chr5 23902094 23902432 -175727718 + LTR57-int LTR ERVL 4998 5343 0 2313 145 46 8 chr5 23902434 23902828 -175727322 + LTR57 LTR ERVL 3 411 0 31 0 0 0 chr5 23902927 23902958 -175727192 + AT_rich Low_complexity Low_complexity 1 31 0 295 253 99 0 chr5 23904217 23904308 -175725842 + MLT1J2 LTR MaLR 63 162 -288 267 344 73 18 chr5 23904307 23904525 -175725625 + MLT1J1 LTR MaLR 217 446 0 * 21 36 0 0 chr5 23904795 23904823 -175725327 + AT_rich Low_complexity Low_complexity 1 28 0 321 221 8 16 chr5 23905199 23905321 -175724829 + (TA)n Simple_repeat Simple_repeat 1 121 0 21 0 0 0 chr5 23905341 23905362 -175724788 + AT_rich Low_complexity Low_complexity 1 21 0 2826 156 15 35 chr5 23905784 23906311 -175723839 - L1PA15 LINE L1 0 6165 5648 1958 132 35 59 chr5 23906311 23906682 -175723468 - THE1B LTR MaLR 0 364 3 4034 99 2 4 chr5 23906695 23907249 -175722901 - THE1B-int LTR MaLR -12 1568 1016 9385 263 20 24 chr5 23907249 23910848 -175719302 - L1PA13 LINE L1 -1938 4859 1272 313 279 114 80 chr5 23910856 23911057 -175719093 - L1PA13 LINE L1 -6025 762 555 * 772 340 38 8 chr5 23911039 23911301 -175718849 - L1PA13 LINE L1 -6517 270 1 231 370 119 18 chr5 23911715 23911942 -175718208 - L2 LINE L2 -708 2606 2357 494 309 142 27 chr5 23911961 23912416 -175717734 + L2 LINE L2 2657 3149 -164 325 267 81 0 chr5 23912547 23912633 -175717517 - L2 LINE L2 -1006 2308 2216 205 200 0 0 chr5 23913406 23913446 -175716704 + A-rich Low_complexity Low_complexity 1 40 0 2344 70 0 19 chr5 23913674 23913986 -175716164 + AluY SINE Alu 6 311 0 26 0 0 0 chr5 23914496 23914522 -175715628 + AT_rich Low_complexity Low_complexity 1 26 0 863 191 53 5 chr5 23914696 23914885 -175715265 - MER2 DNA MER2_type -135 210 13 23 0 0 0 chr5 23914936 23914959 -175715191 + AT_rich Low_complexity Low_complexity 1 23 0 631 260 18 6 chr5 23916068 23916237 -175713913 - L1MA10 LINE L1 -8 6326 6156 4200 188 24 20 chr5 23916273 23917315 -175712835 - L1MB1 LINE L1 -8 6160 5109 2002 126 7 10 chr5 23917328 23917630 -175712520 - AluSg SINE Alu -1 309 9 2157 200 7 99 chr5 23918276 23918840 -175711310 - MLT2B2 LTR ERVL -3 512 1 23 0 0 0 chr5 23918965 23918988 -175711162 + AT_rich Low_complexity Low_complexity 1 23 0 532 248 40 24 chr5 23919842 23919967 -175710183 - MER58B DNA MER1_type -17 324 198 1980 203 129 28 chr5 23919975 23920352 -175709798 + MER39 LTR ERV1 7 345 -362 2479 66 0 0 chr5 23920352 23920654 -175709496 - AluY SINE Alu -9 302 1 1980 203 129 28 chr5 23920654 23920876 -175709274 + MER39 LTR ERV1 345 707 0 1623 202 50 22 chr5 23921211 23921572 -175708578 + MLT1B LTR MaLR 20 390 0 383 354 83 43 chr5 23923314 23923735 -175706415 + HERVL LTR ERVL 1736 2173 -3481 658 359 52 20 chr5 23923865 23924369 -175705781 + HERVL LTR ERVL 2381 2900 -2096 1269 215 83 12 chr5 23924925 23925250 -175704900 + MER7A DNA MER2_type 1 346 0 3240 171 52 27 chr5 23925867 23927015 -175703135 - pTR5 LTR ERV1 -133 1523 5 40 49 0 0 chr5 23927801 23927862 -175702288 + AT_rich Low_complexity Low_complexity 1 61 0 260 109 0 22 chr5 23927952 23927998 -175702152 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 1914 162 7 0 chr5 23927998 23928307 -175701843 - AluSq SINE Alu -2 311 1 195 42 0 0 chr5 23928311 23928335 -175701815 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 2501 34 0 0 chr5 23928337 23928634 -175701516 - L1PA4 LINE L1 -13 6142 5846 2091 137 53 8 chr5 23929062 23929421 -175700729 - THE1C LTR MaLR 0 375 1 33 0 0 0 chr5 23929432 23929465 -175700685 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 23929710 23929731 -175700419 + AT_rich Low_complexity Low_complexity 1 21 0 344 260 36 88 chr5 23929810 23930002 -175700148 + L1M4b LINE L1 762 943 -5916 1317 257 39 56 chr5 23930048 23930713 -175699437 + L1M4b LINE L1 1123 1882 -5065 252 200 64 120 chr5 23930718 23930843 -175699307 + L1M4b LINE L1 3447 3564 -3393 * 688 273 86 57 chr5 23930842 23931408 -175698742 + L1M3c LINE L1 1229 1781 -4563 1897 129 7 42 chr5 23931641 23931822 -175698328 - AluSx SINE Alu -4 308 141 2307 91 0 7 chr5 23931822 23932131 -175698019 - AluY SINE Alu -2 309 3 1897 129 7 42 chr5 23932131 23932258 -175697892 - AluSx SINE Alu -171 141 11 4343 209 11 13 chr5 23932697 23932820 -175697330 - L1 LINE L1 -1371 4775 4653 4645 96 23 25 chr5 23932820 23933508 -175696642 - LTR12 LTR ERV1 -1 687 1 4343 209 11 13 chr5 23933508 23934409 -175695741 - L1 LINE L1 -1493 4653 3753 14281 27 1 0 chr5 23934410 23936109 -175694041 + L1P LINE L1 3355 5054 -1092 2295 215 15 17 chr5 23936107 23936396 -175693754 - L1 LINE L1 -2389 3757 3469 * 2552 17 0 10 chr5 23936396 23936689 -175693461 - AluYa5 SINE Alu -21 290 1 2295 215 15 17 chr5 23936689 23936995 -175693155 - L1 LINE L1 -2677 3469 3163 3554 153 59 26 chr5 23936995 23937364 -175692786 + L1PB4 LINE L1 5405 5760 -396 288 0 0 0 chr5 23937364 23937396 -175692754 + (TA)n Simple_repeat Simple_repeat 1 32 0 3554 153 59 26 chr5 23937396 23937750 -175692400 + L1PB4 LINE L1 5760 6153 -3 23 54 0 0 chr5 23937750 23937787 -175692363 + AT_rich Low_complexity Low_complexity 1 37 0 432 0 0 0 chr5 23937858 23937906 -175692244 + (TA)n Simple_repeat Simple_repeat 2 49 0 2353 75 0 3 chr5 23937910 23938217 -175691933 - AluY SINE Alu 0 311 6 1969 133 20 0 chr5 23938499 23938793 -175691357 - AluSx SINE Alu -8 304 5 230 278 0 0 chr5 23938860 23938932 -175691218 - L1M4 LINE L1 -942 5204 5133 23 0 0 0 chr5 23938951 23938974 -175691176 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 23938998 23939019 -175691131 + AT_rich Low_complexity Low_complexity 1 21 0 2325 94 0 0 chr5 23939561 23939870 -175690280 - AluY SINE Alu -2 309 1 21 57 0 0 chr5 23939994 23940029 -175690121 + AT_rich Low_complexity Low_complexity 1 35 0 2814 173 19 0 chr5 23940030 23940516 -175689634 - Tigger1 DNA MER2_type -1 2417 1923 5767 144 14 37 chr5 23940540 23941583 -175688567 - Tigger1 DNA MER2_type -618 1800 782 866 256 123 102 chr5 23941571 23942060 -175688090 + MLT1E LTR MaLR 67 591 -2 * 228 311 33 49 chr5 23943336 23943458 -175686692 + L1MDa LINE L1 871 990 -5433 1283 288 54 46 chr5 23943529 23943656 -175686494 + L1MDa LINE L1 1147 1271 -5670 2451 74 0 0 chr5 23943656 23943966 -175686184 + AluY SINE Alu 1 310 -1 1283 288 54 46 chr5 23943966 23944940 -175685210 + L1MDa LINE L1 1271 2363 -4578 432 276 130 80 chr5 23944943 23945077 -175685073 + L1MDa LINE L1 2485 2611 -4511 2183 77 0 11 chr5 23945077 23945406 -175684744 - AluY SINE Alu 0 326 1 432 276 130 80 chr5 23945406 23945632 -175684518 + L1MDa LINE L1 2611 2864 -4258 8791 211 86 19 chr5 23945639 23945701 -175684449 + L1MA8 LINE L1 3379 3435 -3651 201 94 0 0 chr5 23945701 23945733 -175684417 + (TA)n Simple_repeat Simple_repeat 2 33 0 1447 199 0 70 chr5 23945733 23946060 -175684090 - AluJo SINE Alu -8 304 1 8791 211 86 19 chr5 23946060 23946795 -175683355 + L1MA8 LINE L1 3435 4119 -2967 2634 99 0 0 chr5 23946795 23947150 -175683000 - THE1A LTR MaLR 0 355 1 8791 211 86 19 chr5 23947150 23947755 -175682395 + L1MA8 LINE L1 4119 4682 -2404 2016 139 0 0 chr5 23947755 23948043 -175682107 + AluSc SINE Alu 3 290 -19 8791 211 86 19 chr5 23948043 23949843 -175680307 + L1MA8 LINE L1 4682 6807 -279 608 263 62 4 chr5 23949954 23950214 -175679936 + L1MDa LINE L1 2918 3193 -3748 182 191 76 0 chr5 23950513 23950644 -175679506 + (TA)n Simple_repeat Simple_repeat 1 141 0 246 158 50 25 chr5 23950671 23950791 -175679359 + (TA)n Simple_repeat Simple_repeat 2 124 0 245 188 14 58 chr5 23951753 23951822 -175678328 + L1MEc LINE L1 1556 1621 -4775 327 277 201 25 chr5 23951930 23952089 -175678061 + L1ME LINE L1 5626 5812 -358 23 0 0 0 chr5 23952136 23952159 -175677991 + AT_rich Low_complexity Low_complexity 1 23 0 908 185 7 0 chr5 23952538 23952689 -175677461 - FRAM SINE Alu -11 165 14 1024 272 94 3 chr5 23952713 23953055 -175677095 - MLT1A2 LTR MaLR -1 373 1 1846 183 64 21 chr5 23953067 23953359 -175676791 + MER65A LTR ERV1 3 320 -125 2010 134 6 16 chr5 23953359 23953672 -175676478 - AluSx SINE Alu -2 310 1 1846 183 64 21 chr5 23953672 23953799 -175676351 + MER65A LTR ERV1 320 440 -5 991 238 33 61 chr5 23953836 23954405 -175675745 + MER65A-int LTR ERV1 35 640 -4231 465 216 11 63 chr5 23954440 23954475 -175675675 - MER54B LTR ERVL -563 230 195 2043 207 130 56 chr5 23954475 23955242 -175674908 - LTR1B LTR ERV1 -2 824 1 465 216 11 63 chr5 23955242 23955371 -175674779 - MER54B LTR ERVL -598 195 95 422 230 3 90 chr5 23955437 23955595 -175674555 + MER65A-int LTR ERV1 689 896 -890 1024 170 44 126 chr5 23955796 23956226 -175673924 + MER65A-int LTR ERV1 1158 1552 -3319 4070 136 40 61 chr5 23956226 23956996 -175673154 - LTR1 LTR ERV1 0 785 32 1691 190 91 79 chr5 23957056 23957853 -175672297 + MER65A-int LTR ERV1 954 1913 -5903 664 232 34 125 chr5 23957975 23958610 -175671540 + MER65A-int LTR ERV1 1541 2276 -4482 321 236 87 55 chr5 23959020 23959147 -175671003 + MER65A-int LTR ERV1 3601 3731 -2867 876 195 92 111 chr5 23959228 23960271 -175669879 + MER65A-int LTR ERV1 2528 4745 -1586 712 222 157 22 chr5 23960273 23960503 -175669647 + LTR1B LTR ERV1 90 350 -476 1840 133 71 40 chr5 23960516 23960869 -175669281 - LTR10A LTR ERV1 -61 548 185 2127 180 82 18 chr5 23961006 23961457 -175668693 + LTR1B LTR ERV1 347 826 0 2782 255 61 57 chr5 23961472 23962047 -175668103 + MER65A-int LTR ERV1 2991 3562 -1309 2437 77 0 6 chr5 23962047 23962358 -175667792 - AluY SINE Alu -2 309 1 2782 255 61 57 chr5 23962358 23962959 -175667191 + MER65A-int LTR ERV1 3562 4172 -699 1690 265 35 25 chr5 23963057 23963369 -175666781 + MER65A-int LTR ERV1 4345 4653 -218 2364 116 52 0 chr5 23963369 23963713 -175666437 - THE1B LTR MaLR 0 364 3 10491 115 12 27 chr5 23963719 23965318 -175664832 - THE1B-int LTR MaLR -4 1576 1 2526 123 0 6 chr5 23965318 23965684 -175664466 - THE1B LTR MaLR 0 364 1 1690 265 35 25 chr5 23965684 23965884 -175664266 + MER65A-int LTR ERV1 4656 4870 -1 1674 176 66 55 chr5 23965885 23966323 -175663827 + MER65A LTR ERV1 1 443 -2 495 251 166 27 chr5 23966979 23967343 -175662807 - MER57A LTR ERV1 0 403 22 1398 220 0 31 chr5 23967799 23968090 -175662060 - AluJo SINE Alu -30 282 1 3886 198 39 18 chr5 23968108 23969010 -175661140 - L1MC2 LINE L1 -1 6343 5423 22 0 0 0 chr5 23969033 23969055 -175661095 + AT_rich Low_complexity Low_complexity 1 22 0 286 310 11 0 chr5 23969267 23969354 -175660796 - L2 LINE L2 -5 3308 3221 670 271 14 14 chr5 23970971 23971181 -175658969 + MER58A DNA MER1_type 7 216 -8 280 127 62 49 chr5 23971548 23971627 -175658523 - L1P5 LINE L1 -309 5845 5767 325 295 93 51 chr5 23971920 23972007 -175658143 - L1ME LINE L1 -595 5569 5487 783 261 84 72 chr5 23972007 23972236 -175657914 + MLT1D LTR MaLR 1 226 -279 186 43 0 0 chr5 23972236 23972259 -175657891 + (ATGTG)n Simple_repeat Simple_repeat 5 27 0 783 261 84 72 chr5 23972259 23972528 -175657622 + MLT1D LTR MaLR 226 505 0 325 295 93 51 chr5 23972528 23972677 -175657473 - L1ME LINE L1 -677 5487 5323 4999 142 14 42 chr5 23973081 23973933 -175656217 - L1MA3 LINE L1 0 6305 5430 273 57 0 0 chr5 23973933 23973968 -175656182 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2173 89 4 4 chr5 23973970 23974250 -175655900 - AluSc SINE Alu -29 280 1 4999 142 14 42 chr5 23974250 23974341 -175655809 - L1MA3 LINE L1 -876 5429 5386 1140 158 76 3 chr5 23974337 23974628 -175655522 - L1M1 LINE L1 -3942 3623 3312 * 966 108 0 0 chr5 23974631 23974760 -175655390 + AluY SINE Alu 1 129 -182 183 152 0 0 chr5 23974763 23974809 -175655341 + (TA)n Simple_repeat Simple_repeat 2 47 0 1242 123 0 0 chr5 23974811 23974990 -175655160 + AluSg/x SINE Alu 131 309 -3 12330 150 40 17 chr5 23974990 23975509 -175654641 - L1M1 LINE L1 -4247 3318 2812 2007 179 87 5 chr5 23975509 23975933 -175654217 + LOR1b LTR ERV1 1 459 -2 12330 150 40 17 chr5 23975933 23976120 -175654030 - L1M1 LINE L1 -4753 2812 2631 2285 88 16 3 chr5 23976120 23976426 -175653724 - AluY SINE Alu -1 310 1 12330 150 40 17 chr5 23976426 23977889 -175652261 - L1M1 LINE L1 -4934 2631 1099 545 172 43 9 chr5 23977886 23978002 -175652148 - L1M1 LINE L1 -7432 133 14 * 286 329 0 7 chr5 23978235 23978387 -175651763 - L1ME LINE L1 -1478 4668 4518 207 351 79 18 chr5 23978650 23978764 -175651386 + L2 LINE L2 691 811 -2503 1632 128 4 0 chr5 23978822 23979056 -175651094 - LTR12 LTR ERV1 0 714 480 322 263 10 0 chr5 23979056 23979155 -175650995 - LTR30 LTR ERV1 -79 643 544 1339 81 46 136 chr5 23979155 23979463 -175650687 - LTR12 LTR ERV1 -437 1683 57 270 211 0 0 chr5 23979463 23979515 -175650635 - LTR30 LTR ERV1 -670 52 1 1894 113 3 53 chr5 23980914 23981252 -175648898 + AluSx SINE Alu 1 323 0 1385 221 0 41 chr5 23982020 23982337 -175647813 + AluJo SINE Alu 2 305 -7 2558 65 0 0 chr5 23982691 23983000 -175647150 - AluY SINE Alu -1 310 2 292 317 108 41 chr5 23983147 23983415 -175646735 + L2 LINE L2 75 360 -2954 361 299 110 16 chr5 23983596 23983850 -175646300 - L2 LINE L2 -102 3211 2934 1819 145 4 0 chr5 23984313 23984582 -175645568 - AluSx SINE Alu -10 302 33 465 203 86 48 chr5 23985821 23986008 -175644142 - L1ME LINE L1 -672 5494 5301 659 311 58 48 chr5 23986329 23986395 -175643755 - L1MEc LINE L1 -5837 559 495 4498 157 36 27 chr5 23986395 23987259 -175642891 + MER4D LTR ERV1 1 872 0 659 311 58 48 chr5 23987259 23987607 -175642543 - L1MEc LINE L1 -5901 495 141 24 67 0 0 chr5 23987901 23987946 -175642204 + AT_rich Low_complexity Low_complexity 1 45 0 730 240 89 36 chr5 23988011 23988370 -175641780 + LTR37B LTR ERV1 86 463 -5 273 169 0 0 chr5 23988479 23988538 -175641612 + CT-rich Low_complexity Low_complexity 2 60 0 477 0 0 0 chr5 23988551 23988604 -175641546 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 237 65 0 0 chr5 23988647 23988678 -175641472 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 25 31 0 0 chr5 23989272 23989304 -175640846 + AT_rich Low_complexity Low_complexity 1 32 0 2319 81 0 3 chr5 23989309 23989605 -175640545 + AluY SINE Alu 1 295 -16 24 53 0 0 chr5 23989705 23989743 -175640407 + AT_rich Low_complexity Low_complexity 1 38 0 2215 101 3 3 chr5 23989914 23990212 -175639938 - AluY SINE Alu -13 298 1 1586 197 145 18 chr5 23990327 23990707 -175639443 - MSTA LTR MaLR 0 428 1 9130 153 6 35 chr5 23990707 23992332 -175637818 - MSTA-int LTR MaLR 0 1580 3 1973 152 134 11 chr5 23992334 23992715 -175637435 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr5 23993144 23993168 -175636982 + AT_rich Low_complexity Low_complexity 1 24 0 2356 78 0 0 chr5 23993851 23994146 -175636004 - AluY SINE Alu -16 295 1 927 282 157 11 chr5 23994192 23994643 -175635507 - LTR55 LTR ERV -12 536 20 4736 84 9 19 chr5 23994955 23995622 -175634528 + PABL_A LTR ERV1 1 660 0 374 298 48 52 chr5 23995627 23995875 -175634275 + MER31-int LTR ERV1 3814 4060 -876 1908 238 17 62 chr5 23996093 23996159 -175633991 + MLT2B1 LTR ERVL 3 70 -450 2359 43 0 0 chr5 23996159 23996435 -175633715 - AluY SINE Alu -13 298 23 1908 238 17 62 chr5 23996435 23996874 -175633276 + MLT2B1 LTR ERVL 70 485 -35 356 0 23 0 chr5 23996874 23996918 -175633232 + (CA)n Simple_repeat Simple_repeat 2 46 0 1908 238 17 62 chr5 23996918 23996945 -175633205 + MLT2B1 LTR ERVL 485 512 -8 2359 84 0 13 chr5 23997058 23997368 -175632782 + AluSg SINE Alu 1 306 -4 629 222 12 18 chr5 23997530 23997701 -175632449 + LTR37B LTR ERV1 82 251 -217 983 203 162 12 chr5 23997780 23998101 -175632049 - L1MB8 LINE L1 -6 6172 5804 2147 88 7 20 chr5 23998467 23998763 -175631387 - AluSx SINE Alu -20 292 1 282 160 0 0 chr5 24000386 24000436 -175629714 + (TA)n Simple_repeat Simple_repeat 1 50 0 703 215 17 57 chr5 24000470 24000647 -175629503 - MER82 DNA MER2_type -1 652 483 485 249 45 51 chr5 24000636 24000813 -175629337 - MER82 DNA MER2_type -116 537 362 * 27 62 0 0 chr5 24001158 24001206 -175628944 + AT_rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr5 24001815 24001837 -175628313 + AT_rich Low_complexity Low_complexity 1 22 0 1448 276 31 71 chr5 24002161 24002708 -175627442 + MLT2B3 LTR ERVL 20 544 -10 222 116 0 0 chr5 24003155 24003198 -175626952 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2593 44 0 16 chr5 24004166 24004482 -175625668 + AluY SINE Alu 1 311 0 434 0 35 0 chr5 24004786 24004843 -175625307 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2123 81 3 11 chr5 24004843 24005128 -175625022 - AluY SINE Alu -28 283 1 390 234 83 76 chr5 24005527 24005817 -175624333 - MER69 DNA AcHobo -7 2519 2228 21 0 0 0 chr5 24005925 24005946 -175624204 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 67 chr5 24006195 24006240 -175623910 + AT_rich Low_complexity Low_complexity 1 42 0 195 42 0 0 chr5 24007046 24007070 -175623080 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1960 113 40 0 chr5 24007076 24007350 -175622800 - AluSc SINE Alu -24 285 1 2113 118 0 13 chr5 24007748 24008062 -175622088 + AluSq SINE Alu 1 310 -3 2561 105 14 3 chr5 24008395 24008766 -175621384 - THE1C LTR MaLR 0 375 1 193 98 49 0 chr5 24008845 24008886 -175621264 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 1936 187 36 51 chr5 24008890 24009360 -175620790 - MLT1C LTR MaLR -3 464 2 180 97 0 0 chr5 24011299 24011330 -175618820 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 759 97 0 0 chr5 24011332 24011435 -175618715 - AluY SINE Alu -28 283 181 209 313 62 0 chr5 24011539 24011619 -175618531 + L2 LINE L2 3226 3310 -3 181 343 14 79 chr5 24012062 24012202 -175617948 + MIR SINE MIR 23 153 -109 205 246 9 64 chr5 24013695 24013805 -175616345 + GA-rich Low_complexity Low_complexity 1 104 0 202 118 0 29 chr5 24016496 24016530 -175613620 + (GAAAA)n Simple_repeat Simple_repeat 4 36 0 315 122 0 0 chr5 24016540 24016589 -175613561 + (GGAA)n Simple_repeat Simple_repeat 4 52 0 326 196 128 0 chr5 24017299 24017401 -175612749 - L1M4 LINE L1 -2977 3169 3055 723 320 137 22 chr5 24017569 24018162 -175611988 + L2 LINE L2 1287 1947 -1367 251 294 29 0 chr5 24018925 24018993 -175611157 + L1ME LINE L1 5699 5768 -402 1525 168 39 13 chr5 24018993 24019446 -175610704 + L1M2 LINE L1 5113 5572 -728 * 16646 205 22 11 chr5 24019438 24020279 -175609871 + L1PA14 LINE L1 2617 3448 -4151 1794 32 9 0 chr5 24020279 24020498 -175609652 + L1PA4 LINE L1 5932 6152 -3 204 97 0 0 chr5 24020503 24020534 -175609616 + (CA)n Simple_repeat Simple_repeat 2 32 0 16646 205 22 11 chr5 24020534 24020680 -175609470 + L1PA14 LINE L1 3451 3594 -4005 1959 134 0 0 chr5 24020680 24020956 -175609194 + AluSg SINE Alu 25 300 -10 16646 205 22 11 chr5 24020956 24024887 -175605263 + L1PA14 LINE L1 3594 7596 -3 223 203 29 29 chr5 24026455 24026524 -175603626 + (TATATG)n Simple_repeat Simple_repeat 4 72 0 396 293 95 64 chr5 24026673 24026956 -175603194 + L1MEd LINE L1 949 1240 -4879 479 231 189 18 chr5 24027032 24027201 -175602949 - MER58A DNA MER1_type 0 224 27 21 57 0 0 chr5 24027692 24027727 -175602423 + AT_rich Low_complexity Low_complexity 1 35 0 2320 86 0 10 chr5 24027812 24028113 -175602037 + AluY SINE Alu 1 298 -13 298 256 73 0 chr5 24028519 24028601 -175601549 + L1ME3A LINE L1 5383 5470 -2338 254 309 47 27 chr5 24028886 24029035 -175601115 - MLT1H LTR MaLR -368 181 30 21 0 0 0 chr5 24029342 24029363 -175600787 + AT_rich Low_complexity Low_complexity 1 21 0 1429 171 50 64 chr5 24029591 24029948 -175600202 - THE1C LTR MaLR -21 354 3 181 258 56 101 chr5 24030977 24031066 -175599084 + MIR SINE MIR 79 163 -99 22 0 0 0 chr5 24032736 24032758 -175597392 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr5 24032875 24032917 -175597233 + (CA)n Simple_repeat Simple_repeat 1 42 0 23 33 0 0 chr5 24032950 24032980 -175597170 + AT_rich Low_complexity Low_complexity 1 30 0 187 233 0 0 chr5 24033101 24033144 -175597006 + L2 LINE L2 3263 3305 -8 1721 169 7 7 chr5 24134080 24134376 -175495774 - AluSx SINE Alu -16 296 1 405 0 0 0 chr5 24134449 24134494 -175495656 + (TG)n Simple_repeat Simple_repeat 2 46 0 1396 179 63 36 chr5 24134575 24134876 -175495274 + AluJb SINE Alu 1 309 -3 2261 89 7 0 chr5 24135772 24136054 -175494096 - AluSx SINE Alu -20 292 9 22 35 0 0 chr5 24136238 24136267 -175493883 + AT_rich Low_complexity Low_complexity 1 29 0 835 176 0 55 chr5 24136275 24136457 -175493693 - FAM SINE Alu -3 172 1 281 263 112 6 chr5 24137118 24137297 -175492853 + L1ME3A LINE L1 5745 5942 -179 2168 113 10 0 chr5 24137445 24137736 -175492414 + AluSg SINE Alu 1 294 -16 867 295 97 40 chr5 24137911 24138355 -175491795 + MLT1J LTR MaLR 32 500 -11 1125 135 5 25 chr5 24138666 24138866 -175491284 - L1P LINE L1 -2149 3997 3802 1289 131 5 15 chr5 24138867 24139073 -175491077 - L1P LINE L1 -3488 2658 2455 404 175 25 0 chr5 24139116 24139196 -175490954 - L1P LINE L1 -3825 2321 2240 2743 98 3 11 chr5 24139196 24139554 -175490596 - THE1A LTR MaLR 0 355 1 11790 105 3 9 chr5 24139554 24141143 -175489007 - THE1A-int LTR MaLR 0 1580 1 2405 77 15 6 chr5 24141143 24141470 -175488680 - THE1A LTR MaLR 0 355 26 256 177 25 13 chr5 24142488 24142639 -175487511 + (TA)n Simple_repeat Simple_repeat 1 152 0 317 246 76 123 chr5 24142681 24142998 -175487152 - MLT1J2 LTR MaLR -8 442 100 511 271 73 7 chr5 24143546 24143697 -175486453 + MIR3 SINE MIR 21 181 -27 297 331 34 11 chr5 24144105 24144268 -175485882 + MIR SINE MIR 20 183 -65 395 296 17 9 chr5 24145352 24145467 -175484683 - L2 LINE L2 -11 3302 3187 249 234 31 0 chr5 24149160 24149224 -175480926 + L1ME3A LINE L1 6097 6162 -8 1594 169 7 28 chr5 24150223 24150507 -175479643 + AluJo SINE Alu 13 290 -22 2358 85 7 0 chr5 24151012 24151305 -175478845 + AluSg SINE Alu 1 295 -15 30 0 0 0 chr5 24151516 24151546 -175478604 + AT_rich Low_complexity Low_complexity 1 30 0 1861 148 6 19 chr5 24151559 24151870 -175478280 + AluSx SINE Alu 1 307 -5 363 307 67 22 chr5 24153284 24153463 -175476687 - L2 LINE L2 -512 2802 2616 602 333 52 4 chr5 24153567 24153816 -175476334 - L2 LINE L2 -1899 1415 1155 378 286 161 26 chr5 24155656 24155848 -175474302 + L2 LINE L2 2437 2654 -660 757 201 62 6 chr5 24155905 24156084 -175474066 + MER5A DNA MER1_type 1 189 0 1837 184 0 3 chr5 24157128 24157422 -175472728 + AluJo SINE Alu 1 293 -19 1505 81 0 5 chr5 24158135 24158357 -175471793 - pTR5 LTR ERV1 -2046 392 172 336 248 10 0 chr5 24158360 24158461 -175471689 - LTR30 LTR ERV1 -80 642 541 1242 137 81 53 chr5 24158462 24158747 -175471403 - pTR5 LTR ERV1 -417 2021 1729 570 129 0 0 chr5 24161073 24161166 -175468984 + AluS SINE Alu 220 312 0 290 313 196 33 chr5 24162540 24163020 -175467130 + L2 LINE L2 2361 2918 -396 270 250 0 0 chr5 24163134 24163194 -175466956 + L2 LINE L2 2994 3053 -219 1391 181 0 45 chr5 24165371 24165636 -175464514 + AluJo SINE Alu 42 294 -18 193 244 101 76 chr5 24169795 24169914 -175460236 + MIR SINE MIR 20 141 -67 2113 114 0 26 chr5 24170213 24170521 -175459629 - AluSx SINE Alu -12 300 1 2149 145 3 0 chr5 24170521 24170830 -175459320 - AluJo SINE Alu -1 311 1 880 146 139 6 chr5 24173346 24173511 -175456639 + MER5A DNA MER1_type 1 187 -2 745 235 40 32 chr5 24173524 24173771 -175456379 - LTR16A1 LTR ERVL 0 457 209 280 314 67 36 chr5 24174140 24174197 -175455953 + L1MEc LINE L1 1253 1307 -4908 2239 81 10 17 chr5 24174197 24174492 -175455658 + AluSq SINE Alu 2 294 -19 280 314 67 36 chr5 24174492 24174931 -175455219 + L1MEc LINE L1 1307 1654 -4561 571 214 26 0 chr5 24175246 24175363 -175454787 - LTR12 LTR ERV1 -234 480 361 237 264 0 0 chr5 24175366 24175438 -175454712 - LTR30 LTR ERV1 -99 623 552 1456 86 3 162 chr5 24175438 24175777 -175454373 - LTR12 LTR ERV1 -429 285 1 389 288 73 77 chr5 24175882 24176432 -175453718 + L1MEc LINE L1 2184 2732 -3483 2130 81 7 45 chr5 24176432 24176741 -175453409 + AluSg SINE Alu 1 297 -13 389 288 73 77 chr5 24176741 24176979 -175453171 + L1MEc LINE L1 2732 2969 -3246 1163 264 96 52 chr5 24177036 24177984 -175452166 + L1MB8 LINE L1 5193 6172 -6 192 40 0 0 chr5 24178633 24178658 -175451492 + (A)n Simple_repeat Simple_repeat 1 25 0 1559 197 4 4 chr5 24178802 24179081 -175451069 + AluJo SINE Alu 1 279 -33 2278 89 0 13 chr5 24179251 24179553 -175450597 - AluY SINE Alu -13 298 1 2019 119 0 7 chr5 24179803 24180096 -175450054 + AluY SINE Alu 5 295 -16 243 320 25 0 chr5 24180275 24180397 -175449753 - LTR67 LTR ERVL -2 555 431 1365 174 20 39 chr5 24180633 24181023 -175449127 + pTR5 LTR ERV1 743 1125 -1313 2139 128 0 0 chr5 24181277 24181582 -175448568 + AluSx SINE Alu 1 305 -7 196 304 43 0 chr5 24181741 24181810 -175448340 - L2 LINE L2 -1237 2077 2006 943 227 22 40 chr5 24181845 24182122 -175448028 - MLT1A1 LTR MaLR -93 272 1 350 203 130 7 chr5 24182188 24182326 -175447824 - L1MC4 LINE L1 -874 7168 7014 274 192 14 14 chr5 24182339 24182412 -175447738 + (TA)n Simple_repeat Simple_repeat 1 73 0 304 255 64 0 chr5 24182433 24182527 -175447623 + L1MC4 LINE L1 6615 6714 -1328 652 242 32 44 chr5 24182548 24182823 -175447327 - MLT1B LTR MaLR 0 390 123 330 98 0 0 chr5 24184351 24184402 -175445748 + (TATG)n Simple_repeat Simple_repeat 2 52 0 2115 125 0 3 chr5 24184402 24184687 -175445463 - AluSx SINE Alu -26 286 1 642 283 76 39 chr5 24184797 24185335 -175444815 - L1MCa LINE L1 -2410 4016 3459 430 263 62 70 chr5 24185367 24185610 -175444540 - L1MCa LINE L1 -3149 3277 3037 35 40 0 40 chr5 24185971 24186046 -175444104 + AT_rich Low_complexity Low_complexity 1 72 0 652 159 38 0 chr5 24186061 24186193 -175443957 - L1MC1 LINE L1 -452 5881 5745 1949 169 38 19 chr5 24186193 24186611 -175443539 - MSTB1 LTR MaLR 0 419 7 1381 207 28 3 chr5 24186619 24186909 -175443241 - L1MC1 LINE L1 -605 5728 5432 1848 213 42 29 chr5 24186924 24187402 -175442748 - L1MCa LINE L1 -5628 798 315 441 231 10 0 chr5 24187458 24187562 -175442588 + L1MCa LINE L1 506 610 -5816 * 1000 235 63 4 chr5 24187560 24187828 -175442322 - L1MCa LINE L1 -6112 314 31 27 62 0 0 chr5 24188239 24188287 -175441863 + AT_rich Low_complexity Low_complexity 1 48 0 208 227 27 13 chr5 24188443 24188518 -175441632 + (TA)n Simple_repeat Simple_repeat 2 77 0 2329 93 3 3 chr5 24189502 24189813 -175440337 + AluY SINE Alu 1 311 0 985 288 21 37 chr5 24190149 24190528 -175439622 + MLT1D LTR MaLR 22 394 -111 389 279 60 34 chr5 24190709 24190978 -175439172 + HAL1b LINE L1 212 487 -861 2136 90 0 31 chr5 24191322 24191640 -175438510 - AluY SINE Alu 0 309 1 905 97 35 7 chr5 24191662 24191806 -175438344 + THE1B LTR MaLR 2 149 -215 10935 113 11 5 chr5 24191826 24193396 -175436754 + THE1B-int LTR MaLR 1 1580 0 2019 141 19 50 chr5 24193396 24193772 -175436378 + THE1B LTR MaLR 1 364 0 33 0 0 0 chr5 24195586 24195619 -175434531 + AT_rich Low_complexity Low_complexity 1 33 0 243 0 0 0 chr5 24196026 24196053 -175434097 + (T)n Simple_repeat Simple_repeat 1 27 0 23 54 0 0 chr5 24196392 24196429 -175433721 + AT_rich Low_complexity Low_complexity 1 37 0 2576 98 35 8 chr5 24196494 24196892 -175433258 + MLT2A1 LTR ERVL 1 409 -35 324 236 0 0 chr5 24196892 24196981 -175433169 + (TA)n Simple_repeat Simple_repeat 1 89 0 7409 87 35 13 chr5 24196997 24198127 -175432023 + HERVL-A1 LTR ERVL 1 1155 -4499 * 15024 81 2 11 chr5 24198124 24200207 -175429943 + HERVL LTR ERVL 2557 4619 -1035 4951 115 7 63 chr5 24200207 24201154 -175428996 - L1P LINE L1 -2018 4128 3235 1897 177 0 0 chr5 24201298 24201598 -175428552 - AluSx SINE Alu -12 300 1 806 196 43 149 chr5 24202733 24203101 -175427049 + MLT1A2 LTR MaLR 4 332 -42 23 0 0 0 chr5 24204151 24204174 -175425976 + AT_rich Low_complexity Low_complexity 1 23 0 194 299 77 80 chr5 24204550 24204824 -175425326 - L2 LINE L2 -13 3300 3028 688 330 44 39 chr5 24204837 24205173 -175424977 + L2 LINE L2 859 1199 -2115 432 0 0 0 chr5 24205173 24205221 -175424929 + (CA)n Simple_repeat Simple_repeat 2 49 0 688 330 44 39 chr5 24205221 24205272 -175424878 + L2 LINE L2 1199 1248 -2066 752 239 0 30 chr5 24205717 24205884 -175424266 - FRAM SINE Alu -14 162 1 23 0 0 0 chr5 24205895 24205918 -175424232 + AT_rich Low_complexity Low_complexity 1 23 0 435 298 107 17 chr5 24206936 24207114 -175423036 + MIR SINE MIR 1 194 -68 602 107 0 115 chr5 24207842 24207964 -175422186 + MER50 LTR ERV1 497 604 -130 1606 236 37 8 chr5 24208020 24208401 -175421749 + L1M1 LINE L1 14 405 -7160 439 302 38 13 chr5 24208461 24208620 -175421530 + LTR33 LTR ERVL 298 460 -61 46 33 0 0 chr5 24208688 24208748 -175421402 + AT_rich Low_complexity Low_complexity 1 60 0 386 343 42 7 chr5 24210883 24211026 -175419124 + MIR SINE MIR 36 183 -79 1960 203 8 6 chr5 24212249 24212613 -175417537 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 24213716 24213738 -175416412 + AT_rich Low_complexity Low_complexity 1 22 0 203 103 26 26 chr5 24214447 24214486 -175415664 + (CA)n Simple_repeat Simple_repeat 2 40 0 1884 189 20 23 chr5 24214840 24215231 -175414919 + MLT1B LTR MaLR 1 390 0 2349 161 11 39 chr5 24215387 24215827 -175414323 + MSTC LTR MaLR 1 428 0 1883 238 92 23 chr5 24215963 24216493 -175413657 + MER77 LTR ERV1 35 601 -4 189 74 0 0 chr5 24216655 24216682 -175413468 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1275 196 42 42 chr5 24216684 24216845 -175413305 - AluJb SINE Alu -31 281 118 213 39 0 0 chr5 24216845 24216871 -175413279 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1275 196 42 42 chr5 24216871 24216974 -175413176 - AluJb SINE Alu -193 119 17 287 253 55 22 chr5 24217006 24217097 -175413053 - MLT1D LTR MaLR -310 195 102 4562 137 53 45 chr5 24217098 24217311 -175412839 - Tigger3b DNA MER2_type -1797 1231 1021 2035 146 3 3 chr5 24217311 24217620 -175412530 - AluSx SINE Alu -3 309 1 4562 137 53 45 chr5 24217620 24218328 -175411822 - Tigger3b DNA MER2_type -2007 1021 302 363 157 0 71 chr5 24218341 24218411 -175411739 - Tigger3b DNA MER2_type -1129 102 38 267 192 164 0 chr5 24218432 24218505 -175411645 - MLT1D LTR MaLR -409 96 12 22 35 0 0 chr5 24218774 24218803 -175411347 + AT_rich Low_complexity Low_complexity 1 29 0 3692 96 15 4 chr5 24218803 24219336 -175410814 - L1MA1 LINE L1 -4 6298 5760 2287 149 3 14 chr5 24220543 24220911 -175409239 - THE1B LTR MaLR 0 364 1 311 281 31 10 chr5 24220930 24221026 -175409124 - MLT2E LTR ERVL -81 547 450 655 239 0 0 chr5 24221136 24221274 -175408876 - ERVL-C1 LTR ERVL -4051 1713 1576 3977 119 10 15 chr5 24221318 24221546 -175408604 - LTR43 LTR ERV1 -2 600 372 2395 140 3 3 chr5 24221546 24221910 -175408240 - THE1B LTR MaLR 0 364 1 3977 119 10 15 chr5 24221910 24222284 -175407866 - LTR43 LTR ERV1 -230 372 1 1138 309 34 2 chr5 24222285 24222693 -175407457 - ERVL-C1 LTR ERVL -4243 1521 1101 10100 237 55 58 chr5 24222702 24227905 -175402245 + L1PA12 LINE L1 5 5193 -2391 7324 203 19 33 chr5 24228025 24229758 -175400392 + L1P LINE L1 3169 4877 -1269 912 177 14 14 chr5 24229859 24230074 -175400076 + L1P LINE L1 5181 5395 -751 789 270 72 4 chr5 24230113 24230376 -175399774 - ERVL-C1 LTR ERVL -4667 1097 817 822 345 29 11 chr5 24230395 24230746 -175399404 - ERVL-C1 LTR ERVL -5062 702 346 1019 251 45 57 chr5 24230801 24231155 -175398995 + MLT1B LTR MaLR 41 390 0 317 325 0 17 chr5 24231310 24231427 -175398723 - ERVL-C1 LTR ERVL -5647 117 3 949 276 22 60 chr5 24231428 24231841 -175398309 - MLT2C1 LTR ERVL 0 397 1 22 0 0 0 chr5 24231906 24231928 -175398222 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 24232042 24232065 -175398085 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr5 24233049 24233097 -175397053 + AT_rich Low_complexity Low_complexity 1 48 0 235 221 0 19 chr5 24233607 24233711 -175396439 + CT-rich Low_complexity Low_complexity 3 104 0 223 287 59 40 chr5 24233975 24234076 -175396074 + L2 LINE L2 3200 3302 -11 28 29 0 0 chr5 24234182 24234217 -175395933 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr5 24234522 24234552 -175395598 + AT_rich Low_complexity Low_complexity 1 30 0 1669 116 3 104 chr5 24234881 24235226 -175394924 - L1PB1 LINE L1 -6 6145 5836 4364 185 45 54 chr5 24235307 24236537 -175393613 + L1MA10 LINE L1 5103 6330 -4 213 316 13 26 chr5 24237414 24237490 -175392660 - L2 LINE L2 0 3272 3198 4401 128 28 5 chr5 24237996 24238748 -175391402 + L1MA4A LINE L1 5535 6303 0 29 0 0 0 chr5 24238813 24238842 -175391308 + AT_rich Low_complexity Low_complexity 1 29 0 8034 157 122 23 chr5 24238842 24240318 -175389832 + Tigger1 DNA MER2_type 582 2245 -173 1507 176 6 73 chr5 24240318 24240648 -175389502 - AluJb SINE Alu -3 309 2 8034 157 122 23 chr5 24240648 24240841 -175389309 + Tigger1 DNA MER2_type 2245 2417 -1 29 0 0 0 chr5 24242250 24242279 -175387871 + AT_rich Low_complexity Low_complexity 1 29 0 305 238 0 0 chr5 24242407 24242487 -175387663 + MIR SINE MIR 183 262 0 21 0 0 0 chr5 24242728 24242749 -175387401 + AT_rich Low_complexity Low_complexity 1 21 0 197 354 163 26 chr5 24243892 24244358 -175385792 + L2 LINE L2 2092 2621 -693 22 70 0 0 chr5 24244432 24244475 -175385675 + AT_rich Low_complexity Low_complexity 1 43 0 4820 187 27 24 chr5 24244486 24245890 -175384260 - L1PA16 LINE L1 -3 6163 4763 1260 236 21 41 chr5 24245890 24246229 -175383921 - L1PA16 LINE L1 -2035 4111 3780 18642 103 7 1 chr5 24246229 24249771 -175380379 - L1PA7 LINE L1 -2 6152 2606 3747 109 0 28 chr5 24249772 24250351 -175379799 + L1PA7 LINE L1 2046 2608 -3538 3663 261 28 37 chr5 24250350 24251501 -175378649 - L1PA16 LINE L1 -2636 3510 2405 * 2023 152 0 0 chr5 24251501 24251798 -175378352 + AluSx SINE Alu 1 297 -15 3663 261 28 37 chr5 24251798 24252223 -175377927 - L1PA16 LINE L1 -3741 2405 1978 210 37 0 0 chr5 24252672 24252699 -175377451 + (CA)n Simple_repeat Simple_repeat 2 28 0 226 229 66 0 chr5 24253100 24253161 -175376989 + MLT1H LTR MaLR 479 543 -6 29 28 0 0 chr5 24253652 24253688 -175376462 + AT_rich Low_complexity Low_complexity 1 36 0 417 259 6 82 chr5 24254196 24254366 -175375784 - LTR16A LTR ERVL -259 191 35 23 68 0 0 chr5 24254400 24254444 -175375706 + AT_rich Low_complexity Low_complexity 1 44 0 21 71 0 0 chr5 24254829 24254871 -175375279 + AT_rich Low_complexity Low_complexity 1 42 0 318 300 14 36 chr5 24254872 24255012 -175375138 + HsTC2 DNA Tc2 1277 1589 -309 256 269 32 21 chr5 24255024 24255117 -175375033 + HsTC2 DNA Tc2 1800 1893 -5 1581 184 3 14 chr5 24255259 24255542 -175374608 + AluJb SINE Alu 11 290 -22 336 127 0 0 chr5 24255920 24255975 -175374175 + (CA)n Simple_repeat Simple_repeat 1 55 0 893 117 61 104 chr5 24255977 24256026 -175374124 + HSMAR2 DNA Mariner 3 53 -1249 1886 120 29 11 chr5 24256026 24256331 -175373819 + AluSc SINE Alu 1 310 0 893 117 61 104 chr5 24256331 24256390 -175373760 + HSMAR2 DNA Mariner 53 113 -1189 2109 75 0 0 chr5 24256390 24256657 -175373493 - AluY SINE Alu -5 306 40 893 117 61 104 chr5 24256657 24256776 -175373374 + HSMAR2 DNA Mariner 113 222 -1080 1649 189 3 66 chr5 24256776 24257142 -175373008 + MER61A LTR ERV1 1 343 0 2435 185 17 62 chr5 24257142 24257705 -175372445 + MER61A-int LTR ERV1 1 537 -4680 1229 227 125 10 chr5 24257705 24258106 -175372044 + LTR2 LTR ERV1 3 449 0 2435 185 17 62 chr5 24258106 24258136 -175372014 + MER61A-int LTR ERV1 537 567 -4650 * 12972 93 26 13 chr5 24258111 24260039 -175370111 + MER61-int LTR ERV1 1391 3343 -1874 275 178 0 0 chr5 24260039 24260084 -175370066 + Alu SINE Alu 1 45 -257 * 339 233 22 0 chr5 24260072 24260162 -175369988 + HSMAR2 DNA Mariner 1209 1300 -2 376 347 12 12 chr5 24260493 24260583 -175369567 + CT-rich Low_complexity Low_complexity 3 95 -74 2373 64 0 0 chr5 24260583 24260878 -175369272 - AluY SINE Alu -16 295 1 376 347 12 12 chr5 24260878 24260954 -175369196 + CT-rich Low_complexity Low_complexity 94 169 0 24 53 0 0 chr5 24261017 24261055 -175369095 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 24261181 24261211 -175368939 + AT_rich Low_complexity Low_complexity 1 30 0 413 229 21 0 chr5 24261448 24261544 -175368606 + AluJ/FLAM SINE Alu 2 99 -213 4208 200 27 17 chr5 24261550 24262646 -175367504 - L1P4 LINE L1 -479 5687 4578 1687 151 76 25 chr5 24262646 24263003 -175367147 + THE1C LTR MaLR 1 375 0 4208 200 27 17 chr5 24263003 24263314 -175366836 - L1P4 LINE L1 -1588 4578 4271 332 221 15 15 chr5 24263986 24264122 -175366028 + (TA)n Simple_repeat Simple_repeat 2 137 0 21 57 0 0 chr5 24264534 24264569 -175365581 + AT_rich Low_complexity Low_complexity 1 35 0 696 150 7 52 chr5 24264694 24264847 -175365303 - L1MA10 LINE L1 -11 6323 6178 1379 196 7 42 chr5 24264847 24265249 -175364901 + L1P LINE L1 4864 5231 -915 * 1978 208 5 5 chr5 24265246 24265645 -175364505 + L1PB4 LINE L1 4519 4917 -1229 634 157 39 39 chr5 24265655 24265808 -175364342 + L1MA5 LINE L1 6143 6295 -5 369 0 0 0 chr5 24266165 24266206 -175363944 + (TG)n Simple_repeat Simple_repeat 2 42 0 255 103 0 0 chr5 24266277 24266316 -175363834 + (CA)n Simple_repeat Simple_repeat 2 40 0 696 257 34 63 chr5 24266754 24266991 -175363159 - MSTD LTR MaLR -7 389 160 1576 179 7 23 chr5 24267084 24267385 -175362765 + AluJo SINE Alu 5 300 -12 1819 178 3 13 chr5 24267467 24267776 -175362374 + AluSx SINE Alu 3 308 -4 465 269 25 0 chr5 24267831 24267950 -175362200 + MIR SINE MIR 34 155 -107 204 40 0 0 chr5 24271360 24271385 -175358765 + (A)n Simple_repeat Simple_repeat 1 25 0 25 51 0 0 chr5 24271631 24271670 -175358480 + AT_rich Low_complexity Low_complexity 1 39 0 294 132 0 0 chr5 24271888 24271941 -175358209 + (TG)n Simple_repeat Simple_repeat 1 53 0 2679 186 8 2 chr5 24271946 24272429 -175357721 + THE1C-int LTR MaLR 1042 1527 -124 196 50 0 50 chr5 24272433 24272473 -175357677 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 3881 186 17 13 chr5 24272701 24273479 -175356671 + L1PB4 LINE L1 5362 6142 -14 2094 113 3 13 chr5 24273577 24273887 -175356263 - AluSx SINE Alu -5 307 1 3882 213 28 44 chr5 24274213 24274462 -175355688 + L1MA9 LINE L1 4215 4467 -1845 1613 143 42 65 chr5 24274462 24274626 -175355524 + THE1C LTR MaLR 1 167 -208 2539 27 3 0 chr5 24274626 24274921 -175355229 - AluY SINE Alu -15 296 1 1613 143 42 65 chr5 24274921 24275140 -175355010 + THE1C LTR MaLR 167 375 0 3882 213 28 44 chr5 24275140 24275301 -175354849 + L1MA9 LINE L1 4467 4629 -1683 1981 132 7 3 chr5 24275301 24275597 -175354553 - AluSx SINE Alu -15 297 1 3882 213 28 44 chr5 24275597 24277284 -175352866 + L1MA9 LINE L1 4629 6274 -38 23 33 0 0 chr5 24277366 24277396 -175352754 + AT_rich Low_complexity Low_complexity 1 30 0 936 142 65 0 chr5 24277628 24277783 -175352367 - AluSg/x SINE Alu -14 298 134 996 214 14 5 chr5 24278353 24280206 -175349944 + ALR/Alpha Satellite centromeric 1 1836 -4839 2430 72 3 0 chr5 24280206 24280510 -175349640 - AluY SINE Alu -6 305 1 996 214 14 5 chr5 24280510 24284944 -175345206 + ALR/Alpha Satellite centromeric 1836 6648 -27 6200 79 5 3 chr5 24284944 24286378 -175343772 - L1PA7 LINE L1 -110 6044 4606 885 218 5 4 chr5 24286379 24287191 -175342959 + ALR/Alpha Satellite centromeric 1 813 0 878 219 9 1 chr5 24287208 24288557 -175341593 + ALR/Alpha Satellite centromeric 1 1359 0 925 222 8 4 chr5 24288569 24292224 -175337926 + ALR/Alpha Satellite centromeric 1 3668 -1 827 232 4 2 chr5 24292239 24294480 -175335670 + ALR/Alpha Satellite centromeric 1 2246 -57 208 176 0 59 chr5 24294480 24294548 -175335602 + (TA)n Simple_repeat Simple_repeat 2 65 0 908 203 7 3 chr5 24294559 24298496 -175331654 + ALR/Alpha Satellite centromeric 1 3949 -42 481 241 8 72 chr5 24298497 24298733 -175331417 + L1MA9 LINE L1 6052 6272 -40 1481 101 0 5 chr5 24300959 24301157 -175328993 + AluSq SINE Alu 102 298 -15 40 83 0 0 chr5 24301632 24301728 -175328422 + AT_rich Low_complexity Low_complexity 1 96 0 28 0 0 0 chr5 24301811 24301839 -175328311 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 24302316 24302339 -175327811 + AT_rich Low_complexity Low_complexity 1 23 0 2393 4 83 0 chr5 24303226 24303504 -175326646 + AluY SINE Alu 1 301 -10 22 0 0 0 chr5 24303946 24303968 -175326182 + AT_rich Low_complexity Low_complexity 1 22 0 3660 65 6 68 chr5 24304344 24304885 -175325265 + L1PA7 LINE L1 5636 6142 -12 718 195 0 0 chr5 24304919 24305042 -175325108 + Tigger1 DNA MER2_type 14 136 -2282 1046 179 24 0 chr5 24305044 24305251 -175324899 + Tigger1 DNA MER2_type 2203 2414 -4 1779 93 8 31 chr5 24305381 24305638 -175324512 + AluY SINE Alu 52 302 -9 21 82 0 0 chr5 24305938 24305987 -175324163 + AT_rich Low_complexity Low_complexity 1 49 0 1981 173 26 0 chr5 24306574 24306926 -175323224 - THE1B LTR MaLR -3 361 1 3445 232 14 11 chr5 24308429 24309290 -175320860 + L1 LINE L1 4056 4919 -1227 * 12976 32 1 2 chr5 24309270 24311179 -175318971 - L1PA4 LINE L1 -433 5722 3818 3559 36 32 0 chr5 24311157 24311599 -175318551 + L1PA4 LINE L1 5692 6147 -8 * 2216 227 98 73 chr5 24311617 24312333 -175317817 + L1PA15 LINE L1 4906 5763 -402 637 118 29 0 chr5 24312333 24312435 -175317715 + THE1C LTR MaLR 270 374 -1 2216 227 98 73 chr5 24312435 24312844 -175317306 + L1PA15 LINE L1 5763 6160 -5 775 152 41 7 chr5 24312857 24313002 -175317148 - L1M2 LINE L1 -719 5593 5444 1469 224 102 100 chr5 24313648 24313843 -175316307 - L1ME1 LINE L1 -11 6155 5962 2199 124 0 10 chr5 24313843 24314157 -175315993 - AluSq SINE Alu 0 313 3 1469 224 102 100 chr5 24314157 24314851 -175315299 - L1ME1 LINE L1 -204 5962 5285 652 283 48 53 chr5 24314872 24315307 -175314843 - L1ME1 LINE L1 -923 5223 4791 29 47 0 0 chr5 24315903 24315946 -175314204 + AT_rich Low_complexity Low_complexity 1 43 0 2048 159 11 11 chr5 24316673 24317051 -175313099 - MER65A LTR ERV1 -28 417 40 2623 99 3 0 chr5 24317122 24317476 -175312674 - THE1A LTR MaLR 0 355 1 9898 109 73 0 chr5 24317476 24318948 -175311202 - THE1A-int LTR MaLR 0 1580 1 2530 104 6 3 chr5 24318948 24319302 -175310848 - THE1A LTR MaLR 0 355 1 1930 155 0 0 chr5 24319312 24319602 -175310548 - AluSx SINE Alu -22 290 1 1072 149 0 23 chr5 24319612 24319786 -175310364 - AluSg/x SINE Alu -14 296 127 4625 62 3 2 chr5 24319806 24320446 -175309704 - L1PA7 LINE L1 0 6154 5551 227 197 45 15 chr5 24320572 24320638 -175309512 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 23 68 0 0 chr5 24321102 24321146 -175309004 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 24321556 24321582 -175308568 + AT_rich Low_complexity Low_complexity 1 26 0 360 43 0 0 chr5 24321874 24321920 -175308230 + (TA)n Simple_repeat Simple_repeat 1 46 0 324 0 0 0 chr5 24322092 24322128 -175308022 + (GA)n Simple_repeat Simple_repeat 1 36 0 553 205 0 33 chr5 24322849 24322971 -175307179 + FLAM_C SINE Alu 1 118 -25 1096 171 40 6 chr5 24322971 24323290 -175306860 - MSTA LTR MaLR -4 424 1 216 67 0 0 chr5 24323300 24323330 -175306820 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 266 300 13 1 chr5 24323429 24323511 -175306639 - MER5A DNA MER1_type -79 102 22 301 152 0 0 chr5 24323683 24323729 -175306421 - MER57A LTR ERV1 -181 222 177 423 0 0 0 chr5 24323987 24324034 -175306116 + (TC)n Simple_repeat Simple_repeat 1 47 0 27 49 0 0 chr5 24324518 24324559 -175305591 + AT_rich Low_complexity Low_complexity 1 41 0 222 20 20 82 chr5 24324970 24325019 -175305131 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 922 192 100 78 chr5 24325094 24325375 -175304775 + AluJb SINE Alu 1 287 -15 2150 94 40 12 chr5 24325645 24325974 -175304176 + L1PA13 LINE L1 5817 6154 -9 264 270 0 0 chr5 24326006 24326080 -175304070 + MER104 DNA Tc2 36 109 -71 235 173 19 19 chr5 24326191 24326243 -175303907 + GA-rich Low_complexity Low_complexity 2 53 0 1262 109 6 0 chr5 24326337 24326511 -175303639 + AluSc SINE Alu 46 220 -89 21 36 0 0 chr5 24326663 24326691 -175303459 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 24326698 24326726 -175303424 + AT_rich Low_complexity Low_complexity 1 28 0 417 224 24 0 chr5 24327099 24327184 -175302966 + Tigger5 DNA MER2_type 2237 2323 0 1582 267 55 70 chr5 24327184 24328616 -175301534 - L1M4 LINE L1 -530 5644 4240 299 171 48 6 chr5 24328619 24328732 -175301418 - L1M4 LINE L1 -2169 3977 3867 448 264 137 22 chr5 24328838 24329334 -175300816 - L1M4 LINE L1 -2472 3674 3122 * 1008 234 58 24 chr5 24329326 24329655 -175300495 - L1MC3 LINE L1 -1607 6596 6257 7185 265 38 42 chr5 24329673 24331593 -175298557 - L1MA3 LINE L1 -2 6303 4376 826 203 0 25 chr5 24331593 24331756 -175298394 - FRAM SINE Alu -17 159 1 7185 265 38 42 chr5 24331756 24333856 -175296294 - L1MA3 LINE L1 -1929 4376 2215 1489 239 119 35 chr5 24333869 24334528 -175295622 - L1MC3 LINE L1 -825 5739 5137 2444 119 6 0 chr5 24334528 24334881 -175295269 - THE1A LTR MaLR 0 355 1 10772 116 7 4 chr5 24334881 24336456 -175293694 - THE1A-int LTR MaLR 0 1580 1 2487 126 0 3 chr5 24336456 24336812 -175293338 - THE1A LTR MaLR 0 355 1 1489 239 119 35 chr5 24336812 24337013 -175293137 - L1MC3 LINE L1 -1062 5502 5319 1521 269 86 29 chr5 24337015 24337874 -175292276 - L1MC3 LINE L1 -1380 5184 4277 682 149 0 33 chr5 24337880 24338001 -175292149 + Tigger3(Golem) DNA MER2_type 2646 2762 -267 401 230 42 24 chr5 24338015 24338180 -175291970 + L1M4 LINE L1 2944 3111 -3035 869 254 46 23 chr5 24338180 24338440 -175291710 - Tigger3(Golem) DNA MER2_type -1 3028 2763 6812 158 36 9 chr5 24338446 24339709 -175290441 + HSMAR2 DNA Mariner 4 1301 -1 1139 265 106 15 chr5 24339729 24340752 -175289398 - L1MC3 LINE L1 -3241 3323 2206 1064 281 45 36 chr5 24340749 24341568 -175288582 - L1MC3 LINE L1 -4852 1193 572 * 283 254 0 16 chr5 24341673 24341736 -175288414 - L1MC3 LINE L1 -5485 560 499 416 233 0 9 chr5 24341813 24341929 -175288221 + CT-rich Low_complexity Low_complexity 3 117 0 1770 142 9 41 chr5 24341936 24342253 -175287897 + AluSx SINE Alu 1 307 -5 236 319 0 14 chr5 24342257 24342326 -175287824 - L1MC3 LINE L1 -6357 207 140 27 62 0 0 chr5 24343215 24343263 -175286887 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr5 24343350 24343371 -175286779 + AT_rich Low_complexity Low_complexity 1 21 0 31 44 0 0 chr5 24343521 24343566 -175286584 + AT_rich Low_complexity Low_complexity 1 45 0 4670 133 58 33 chr5 24343582 24344678 -175285472 + pTR5 LTR ERV1 741 2024 -414 374 194 31 20 chr5 24344679 24344777 -175285373 + LTR30 LTR ERV1 544 642 -80 1479 86 14 14 chr5 24344780 24345001 -175285149 + pTR5 LTR ERV1 172 392 -2046 15796 206 30 22 chr5 24345001 24346129 -175284021 - L1P4 LINE L1 -713 5448 4331 2548 45 0 3 chr5 24346129 24346441 -175283709 - AluY SINE Alu 0 311 1 15796 206 30 22 chr5 24346441 24349191 -175280959 - L1P4 LINE L1 -1830 4331 1542 1590 188 0 4 chr5 24349713 24349985 -175280165 + AluSx SINE Alu 15 285 -27 240 287 72 62 chr5 24350274 24350483 -175279667 + L1ME LINE L1 5555 5765 -399 25 31 0 0 chr5 24350623 24350655 -175279495 + AT_rich Low_complexity Low_complexity 1 32 0 10980 151 25 1 chr5 24350688 24352167 -175277983 + L1PA10 LINE L1 3394 4929 -1239 1810 153 41 49 chr5 24352167 24352534 -175277616 - THE1B LTR MaLR 0 364 1 10980 151 25 1 chr5 24352534 24353804 -175276346 + L1PA10 LINE L1 4929 6168 0 28 29 0 0 chr5 24354044 24354079 -175276071 + AT_rich Low_complexity Low_complexity 1 35 0 366 464 106 17 chr5 24354189 24354670 -175275480 - L1MC4a LINE L1 -1772 6036 5513 917 215 138 0 chr5 24354978 24355224 -175274926 + AluJo SINE Alu 1 280 -32 201 74 0 0 chr5 24355227 24355254 -175274896 + (TAA)n Simple_repeat Simple_repeat 2 28 0 215 162 27 54 chr5 24355347 24355421 -175274729 + T-rich Low_complexity Low_complexity 5 76 0 512 383 66 27 chr5 24355606 24356016 -175274134 + L1ME2 LINE L1 39 464 -5932 702 295 84 37 chr5 24356214 24356268 -175273882 + L1ME2 LINE L1 2926 2976 -3239 2033 162 20 11 chr5 24356268 24356626 -175273524 - THE1B LTR MaLR -3 361 1 702 295 84 37 chr5 24356626 24357059 -175273091 + L1ME2 LINE L1 2976 3452 -2763 1249 267 37 66 chr5 24357079 24357458 -175272692 + L1ME2 LINE L1 3969 4358 -1857 2152 136 37 8 chr5 24357458 24357811 -175272339 - THE1B LTR MaLR 0 364 2 1249 267 37 66 chr5 24357811 24358066 -175272084 + L1ME2 LINE L1 4358 4619 -1596 1924 250 72 27 chr5 24358066 24358689 -175271461 + MLT1E1 LTR MaLR 2 652 -2 1249 267 37 66 chr5 24358689 24359069 -175271081 + L1ME2 LINE L1 4619 4955 -1260 802 251 77 32 chr5 24359148 24359523 -175270627 + L1ME2 LINE L1 4969 5360 -855 1185 310 29 36 chr5 24359547 24360179 -175269971 + L1ME2 LINE L1 5395 6021 -212 1818 138 0 0 chr5 24360194 24360455 -175269695 - AluSq SINE Alu -52 261 1 261 0 0 0 chr5 24360457 24360486 -175269664 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 24360862 24360884 -175269266 + AT_rich Low_complexity Low_complexity 1 22 0 360 195 11 35 chr5 24361244 24361331 -175268819 - L1P LINE L1 -1489 4657 4573 209 353 57 74 chr5 24361725 24362022 -175268128 - L2 LINE L2 0 3313 3022 1198 213 77 81 chr5 24362022 24362491 -175267659 - MLT1C LTR MaLR 0 467 1 209 353 57 74 chr5 24362491 24362559 -175267591 - L2 LINE L2 -291 3022 2954 215 264 19 0 chr5 24362736 24362789 -175267361 - L2 LINE L2 -365 2907 2854 21 0 0 0 chr5 24363132 24363153 -175266997 + AT_rich Low_complexity Low_complexity 1 21 0 496 269 70 26 chr5 24363324 24363551 -175266599 - L1ME LINE L1 -511 6464 6228 181 0 69 0 chr5 24363642 24363671 -175266479 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1237 187 52 42 chr5 24364304 24364593 -175265557 - AluJo SINE Alu -10 292 1 2321 86 0 6 chr5 24364926 24365239 -175264911 + AluY SINE Alu 1 311 0 1052 209 48 101 chr5 24365329 24365706 -175264444 - MLT1A2 LTR MaLR -16 358 2 518 212 58 48 chr5 24365924 24366113 -175264037 - L1MB7 LINE L1 0 6184 5994 3034 296 59 56 chr5 24366121 24368214 -175261936 - L1MEc LINE L1 -2405 4552 2482 831 320 94 22 chr5 24368405 24369043 -175261107 - L1MEc LINE L1 -4571 2388 1705 1371 304 31 52 chr5 24369101 24369643 -175260507 - L1MEc LINE L1 -6318 541 11 2102 226 22 10 chr5 24369643 24370142 -175260008 + LTR10B LTR ERV1 1 505 0 3228 183 16 11 chr5 24370142 24370770 -175259380 + LTR10B-int LTR ERV1 5 635 -6014 1672 159 21 3 chr5 24370770 24371110 -175259040 - L1PBa LINE L1 -4827 2036 1691 * 3019 209 1 9 chr5 24371106 24371757 -175258393 + L1 LINE L1 2150 2795 -3351 3875 184 16 6 chr5 24371763 24372470 -175257680 + MER50 LTR ERV1 1 714 -20 1664 258 18 2 chr5 24372513 24373010 -175257140 + L1 LINE L1 2794 3298 -2848 1446 121 52 20 chr5 24373545 24373794 -175256356 + L1PA11 LINE L1 5918 6174 0 2141 96 0 0 chr5 24373938 24374249 -175255901 + AluSg SINE Alu 1 311 0 1160 236 143 11 chr5 24374748 24375071 -175255079 + MLT2D LTR ERVL 1 379 -35 417 86 0 0 chr5 24375071 24375129 -175255021 + (CA)n Simple_repeat Simple_repeat 1 58 0 1160 236 143 11 chr5 24375129 24375170 -175254980 + MLT2D LTR ERVL 379 413 -1 419 254 58 10 chr5 24375341 24375513 -175254637 + MER92B LTR ERV1 257 412 0 548 220 167 12 chr5 24376294 24376506 -175253644 - L1MA8 LINE L1 -40 6272 6036 248 396 90 4 chr5 24377507 24377752 -175252398 + L1MEc LINE L1 179 444 -5952 1505 147 4 11 chr5 24378020 24378316 -175251834 + L1MA7 LINE L1 6013 6306 0 1034 253 104 15 chr5 24378534 24379005 -175251145 - L1M4c LINE L1 -2581 4063 3551 * 1970 284 42 33 chr5 24378980 24380292 -175249858 - L1M4c LINE L1 -4053 2772 1296 622 161 65 8 chr5 24380336 24380460 -175249690 + MLT1B LTR MaLR 1 131 -259 1021 237 11 38 chr5 24380558 24380824 -175249326 + MLT1B LTR MaLR 132 390 0 905 251 89 20 chr5 24380825 24380872 -175249278 - L1M4c LINE L1 -5282 1260 1218 1487 196 14 11 chr5 24380872 24381254 -175248896 - AluJb SINE Alu 0 388 6 905 251 89 20 chr5 24381254 24381494 -175248656 - L1M4c LINE L1 -5324 1218 942 3594 104 22 4 chr5 24381494 24382041 -175248109 - L1PA13 LINE L1 0 6163 5607 905 251 89 20 chr5 24382041 24382098 -175248052 - L1M4c LINE L1 -5600 942 890 967 256 110 66 chr5 24382103 24382541 -175247609 + MLT1D LTR MaLR 49 505 0 1852 268 52 14 chr5 24382541 24383131 -175247019 - L1M4c LINE L1 -5906 636 24 213 39 0 0 chr5 24383791 24383817 -175246333 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2039 137 3 0 chr5 24384215 24384514 -175245636 - AluSp SINE Alu -13 300 1 1045 249 52 33 chr5 24385547 24385912 -175244238 - MER92A LTR ERV1 -1 411 40 197 315 0 27 chr5 24385939 24386012 -175244138 - MIR SINE MIR -10 252 182 2436 60 0 0 chr5 24386300 24386601 -175243549 + AluY SINE Alu 1 301 -10 291 157 0 0 chr5 24386963 24387014 -175243136 + (TA)n Simple_repeat Simple_repeat 1 51 0 668 131 0 0 chr5 24387027 24387126 -175243024 - HY3 scRNA scRNA -2 99 1 198 0 0 0 chr5 24387650 24387672 -175242478 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 297 0 0 0 chr5 24387671 24387704 -175242446 + (TG)n Simple_repeat Simple_repeat 2 34 0 326 318 47 47 chr5 24387736 24387778 -175242372 + L1ME LINE L1 5498 5539 -582 977 245 32 86 chr5 24387778 24388186 -175241964 - MLT1B LTR MaLR 0 390 5 326 318 47 47 chr5 24388186 24388354 -175241796 + L1ME LINE L1 5538 5708 -413 24 53 0 0 chr5 24388686 24388724 -175241426 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 24388770 24388791 -175241359 + AT_rich Low_complexity Low_complexity 1 21 0 858 289 52 25 chr5 24388982 24389346 -175240804 + MLT1A2 LTR MaLR 1 374 0 2881 137 12 18 chr5 24389831 24390328 -175239822 + MER50 LTR ERV1 1 494 -240 259 222 19 0 chr5 24390324 24390378 -175239772 + MER50 LTR ERV1 657 711 -23 * 639 71 0 0 chr5 24390625 24390710 -175239440 + (TA)n Simple_repeat Simple_repeat 2 86 0 1783 167 3 14 chr5 24390713 24391007 -175239143 - AluSx SINE Alu -21 291 1 1394 228 63 6 chr5 24391186 24391520 -175238630 - MLT1D LTR MaLR 0 505 153 1771 257 65 23 chr5 24391524 24392116 -175238034 - MER92B LTR ERV1 -3 560 1 466 210 68 74 chr5 24392116 24392269 -175237881 - MLT1D LTR MaLR -353 152 1 1904 197 33 20 chr5 24392589 24392980 -175237170 + MSTD LTR MaLR 1 396 0 256 366 80 9 chr5 24393394 24393506 -175236644 + L2 LINE L2 2572 2691 -623 339 232 0 0 chr5 24393513 24393595 -175236555 + (TATATG)n Simple_repeat Simple_repeat 2 83 0 287 175 0 0 chr5 24393600 24393663 -175236487 - L1MC4 LINE L1 -1340 6702 6640 899 238 15 0 chr5 24393663 24393865 -175236285 + MER2 DNA MER2_type 2 206 -139 313 301 0 0 chr5 24393894 24393967 -175236183 + MER2 DNA MER2_type 273 345 0 398 355 153 11 chr5 24394430 24394712 -175235438 + MER77 LTR ERV1 278 599 -6 1527 281 17 12 chr5 24394806 24395223 -175234927 + MER77-int LTR ERV1 13 431 -3760 1858 260 71 61 chr5 24395247 24396669 -175233481 + MER21-int LTR ERV1 1920 2695 -1496 608 267 84 46 chr5 24396678 24396894 -175233256 + MER77 LTR ERV1 407 599 -6 21 0 0 0 chr5 24396979 24397000 -175233150 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 24397635 24397663 -175232487 + AT_rich Low_complexity Low_complexity 1 28 0 535 286 63 11 chr5 24398585 24398760 -175231390 - MIR SINE MIR -24 238 55 1762 153 17 3 chr5 24399344 24399638 -175230512 + AluJb SINE Alu 1 298 -14 261 242 0 0 chr5 24399897 24399914 -175230236 + (TA)n Simple_repeat Simple_repeat 1 17 -49 189 0 0 0 chr5 24399914 24399935 -175230215 + (CA)n Simple_repeat Simple_repeat 2 22 0 261 242 0 0 chr5 24399935 24399983 -175230167 + (TA)n Simple_repeat Simple_repeat 16 66 0 4933 201 22 15 chr5 24399992 24402036 -175228114 - L1PA15 LINE L1 -5 6160 4100 3883 239 13 12 chr5 24402039 24403107 -175227043 + L1 LINE L1 2997 4065 -2081 3430 163 20 14 chr5 24403203 24404123 -175226027 - L1MA3 LINE L1 -2 6303 5225 10464 238 34 9 chr5 24404139 24405518 -175224632 - L1M2 LINE L1 -4391 2458 994 498 17 0 0 chr5 24405518 24405577 -175224573 + (TG)n Simple_repeat Simple_repeat 1 59 0 10464 238 34 9 chr5 24405577 24406590 -175223560 - L1M2 LINE L1 -5855 994 7 504 240 0 0 chr5 24407460 24407639 -175222511 + (TA)n Simple_repeat Simple_repeat 2 180 0 1124 274 36 27 chr5 24407807 24408172 -175221978 + MLT1A2 LTR MaLR 1 368 -6 1750 185 0 3 chr5 24408205 24408502 -175221648 + AluJb SINE Alu 1 296 -16 1480 232 49 0 chr5 24408995 24409323 -175220827 - MER7A DNA MER2_type -1 345 4 210 171 0 0 chr5 24409341 24409382 -175220768 + (CA)n Simple_repeat Simple_repeat 1 41 0 633 262 15 0 chr5 24409638 24409798 -175220352 - MLT1A2 LTR MaLR -39 335 188 31 26 0 0 chr5 24409889 24409927 -175220223 + AT_rich Low_complexity Low_complexity 1 38 0 327 237 102 46 chr5 24409938 24410071 -175220079 - MLT1B LTR MaLR -244 137 1 1543 194 7 26 chr5 24410071 24410375 -175219775 - ERVL-D LTR ERVL -1160 4604 4307 2532 64 0 3 chr5 24410389 24410701 -175219449 + AluY SINE Alu 1 311 0 2562 249 32 16 chr5 24410707 24411874 -175218276 - ERVL-D LTR ERVL -4502 1262 4 1447 251 19 40 chr5 24411876 24411929 -175218221 - MLT2D LTR ERVL 0 414 361 785 253 96 37 chr5 24411929 24412253 -175217897 - MER2 DNA MER2_type -1 343 1 1447 251 19 40 chr5 24412253 24412622 -175217528 - MLT2D LTR ERVL -53 361 1 21 36 0 0 chr5 24412641 24412669 -175217481 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr5 24412736 24412773 -175217377 + AT_rich Low_complexity Low_complexity 1 37 0 414 280 46 74 chr5 24412855 24413223 -175216927 - MLT1H LTR MaLR -33 376 51 341 372 36 0 chr5 24413512 24413708 -175216442 - MIR SINE MIR -15 247 45 21 36 0 0 chr5 24414854 24414882 -175215268 + AT_rich Low_complexity Low_complexity 1 28 0 14690 174 73 29 chr5 24415109 24421148 -175209002 + L1PB1 LINE L1 1 6300 -567 3532 108 13 6 chr5 24421255 24421800 -175208350 + L1PB1 LINE L1 6316 6864 -3 28 0 0 0 chr5 24421800 24421828 -175208322 + AT_rich Low_complexity Low_complexity 1 28 0 4358 181 9 11 chr5 24421868 24423161 -175206989 - L1P5 LINE L1 -491 5660 4364 46 62 0 0 chr5 24423238 24423319 -175206831 + AT_rich Low_complexity Low_complexity 1 81 0 5317 105 112 29 chr5 24423558 24424635 -175205515 + MER11A LTR ERVK 4 1266 0 22 0 0 0 chr5 24424708 24424730 -175205420 + AT_rich Low_complexity Low_complexity 1 22 0 589 127 3 7 chr5 24424881 24424991 -175205159 - L1P LINE L1 -1059 5087 4981 423 0 0 0 chr5 24425030 24425077 -175205073 + (CA)n Simple_repeat Simple_repeat 2 48 0 1786 251 70 35 chr5 24425217 24425790 -175204360 - MLT1E LTR MaLR 0 593 1 29 0 0 0 chr5 24427185 24427214 -175202936 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 24428064 24428090 -175202060 + AT_rich Low_complexity Low_complexity 1 26 0 3733 70 8 2 chr5 24428157 24428660 -175201490 - L1P3 LINE L1 -342 5812 5307 2197 79 7 3 chr5 24428660 24428953 -175201197 + L1PA7 LINE L1 5850 6153 -1 8797 77 10 1 chr5 24429910 24431866 -175198284 - L1PA6 LINE L1 -5 6149 4163 4246 74 7 3 chr5 24431867 24432446 -175197704 - L1PA6 LINE L1 -2042 4104 3524 1999 194 51 53 chr5 24432444 24432954 -175197196 - L1MC1 LINE L1 -309 6024 5516 * 468 167 12 0 chr5 24433055 24433139 -175197011 - L1MC1 LINE L1 -822 5511 5427 3006 162 19 6 chr5 24433228 24433764 -175196386 - L1MB1 LINE L1 -91 6077 5535 484 247 27 7 chr5 24433783 24433929 -175196221 - L1MB1 LINE L1 -1536 4610 4462 335 147 13 119 chr5 24433930 24434039 -175196111 + L1PA8A LINE L1 5396 5491 -640 * 2398 212 27 14 chr5 24434034 24434656 -175195494 + L1 LINE L1 4763 5392 -754 22 56 0 0 chr5 24434656 24434692 -175195458 + AT_rich Low_complexity Low_complexity 1 36 0 631 314 18 26 chr5 24435019 24435245 -175194905 + MIR SINE MIR 13 236 -26 201 154 19 58 chr5 24435683 24435735 -175194415 + GA-rich Low_complexity Low_complexity 3 52 0 23 0 0 0 chr5 24435810 24435833 -175194317 + AT_rich Low_complexity Low_complexity 1 23 0 273 57 0 0 chr5 24437405 24437440 -175192710 + (TTTTA)n Simple_repeat Simple_repeat 4 38 0 2002 320 56 40 chr5 24439483 24440419 -175189731 + L2 LINE L2 1812 2762 -552 25 0 0 0 chr5 24441326 24441351 -175188799 + AT_rich Low_complexity Low_complexity 1 25 0 637 139 17 9 chr5 24441999 24442114 -175188036 + L1MA3 LINE L1 15 130 -7435 2252 79 3 0 chr5 24442115 24442405 -175187745 + AluSc SINE Alu 1 291 -18 905 54 0 0 chr5 24442409 24442520 -175187630 - L1P1 LINE L1 -389 5766 5656 18724 181 33 22 chr5 24442545 24445160 -175184990 + L1MA3 LINE L1 118 2702 -5022 2076 174 56 19 chr5 24445160 24445573 -175184577 + MSTA LTR MaLR 1 428 0 18724 181 33 22 chr5 24445573 24447150 -175183000 + L1MA3 LINE L1 2702 4260 -3464 2380 68 7 3 chr5 24447150 24447445 -175182705 + AluY SINE Alu 2 297 -14 18724 181 33 22 chr5 24447445 24450772 -175179378 + L1MA3 LINE L1 4260 7723 -1 478 280 25 13 chr5 24450820 24450977 -175179173 - LTR41 LTR ERVL -605 168 10 927 320 52 18 chr5 24451029 24451467 -175178683 + ERVL LTR ERVL 2120 2572 -3192 357 333 32 20 chr5 24451635 24452011 -175178139 + ERVL LTR ERVL 2777 3213 -2441 592 297 69 29 chr5 24452075 24452351 -175177799 + ERVL LTR ERVL 3362 3648 -2116 261 0 0 0 chr5 24452366 24452395 -175177755 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 425 327 64 88 chr5 24452591 24453141 -175177009 + L2 LINE L2 2735 3262 -51 1776 80 42 0 chr5 24453163 24453400 -175176750 + AluSg SINE Alu 1 247 -63 1894 106 72 10 chr5 24453406 24453699 -175176451 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr5 24455487 24455515 -175174635 + AT_rich Low_complexity Low_complexity 1 28 0 655 246 50 5 chr5 24455758 24455957 -175174193 + L1MA7 LINE L1 6072 6279 -12 21 0 0 0 chr5 24456036 24456057 -175174093 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 24506924 24506962 -175123188 + AT_rich Low_complexity Low_complexity 1 38 0 610 302 36 25 chr5 24507091 24507369 -175122781 - L1ME3A LINE L1 -5 6165 5885 263 264 50 8 chr5 24507406 24507527 -175122623 - L1ME3A LINE L1 -590 5580 5455 1258 199 68 40 chr5 24507611 24507932 -175122218 - THE1C LTR MaLR -45 330 1 3962 152 8 12 chr5 24507932 24508592 -175121558 - THE1C-int LTR MaLR -1 1579 923 2060 91 14 0 chr5 24508769 24509065 -175121085 - L1PA13 LINE L1 -19 6144 5845 359 303 119 32 chr5 24509136 24509387 -175120763 - L1ME3A LINE L1 -2268 3878 3606 235 235 29 0 chr5 24509399 24509467 -175120683 - L1 LINE L1 -2583 3563 3494 3307 215 34 37 chr5 24509499 24510393 -175119757 - L1MB5 LINE L1 -8 6166 5276 264 160 0 0 chr5 24510388 24510438 -175119712 - L1M4c LINE L1 -4996 1388 1339 * 325 317 107 4 chr5 24510532 24510813 -175119337 - L1 LINE L1 -3175 2971 2662 252 0 0 0 chr5 24511853 24511881 -175118269 + (TG)n Simple_repeat Simple_repeat 1 28 0 209 119 24 0 chr5 24511881 24511923 -175118227 + GA-rich Low_complexity Low_complexity 2 44 0 287 289 93 50 chr5 24511932 24512114 -175118036 + L1M4 LINE L1 4636 4840 -1306 2261 83 0 13 chr5 24512114 24512414 -175117736 + AluY SINE Alu 1 296 -15 287 289 93 50 chr5 24512414 24512553 -175117597 + L1M4 LINE L1 4840 4971 -1175 2428 216 31 12 chr5 24512553 24513066 -175117084 + Tigger7 DNA MER2_type 1 523 -1964 450 250 0 0 chr5 24513068 24513156 -175116994 + Tigger7 DNA MER2_type 2500 2587 0 2252 90 0 7 chr5 24513175 24513476 -175116674 + AluY SINE Alu 13 311 0 472 333 41 35 chr5 24513476 24513845 -175116305 + L1M4 LINE L1 4981 5351 -795 1641 176 46 30 chr5 24513895 24514264 -175115886 + THE1C LTR MaLR 1 375 0 4486 153 48 56 chr5 24514266 24515141 -175115009 + THE1C-int LTR MaLR 3 870 -710 219 69 0 0 chr5 24515331 24515360 -175114790 + (CA)n Simple_repeat Simple_repeat 2 30 0 231 203 31 0 chr5 24515420 24515476 -175114674 + L1MC4 LINE L1 6638 6698 -1344 387 0 0 0 chr5 24515476 24515519 -175114631 + (CA)n Simple_repeat Simple_repeat 2 44 0 877 168 5 92 chr5 24515527 24515723 -175114427 - AluJb SINE Alu -133 179 1 1653 87 0 0 chr5 24516078 24516296 -175113854 - AluY SINE Alu -2 309 92 24 32 0 0 chr5 24516313 24516344 -175113806 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 24516860 24516882 -175113268 + AT_rich Low_complexity Low_complexity 1 22 0 333 279 36 9 chr5 24517125 24517236 -175112914 - MER94 DNA DNA -2 132 19 3182 110 2 40 chr5 24517301 24517828 -175112322 - L1PA13 LINE L1 0 6163 5657 339 307 79 42 chr5 24517828 24518017 -175112133 - MIR SINE MIR -57 205 10 206 0 0 65 chr5 24518335 24518366 -175111784 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1708 272 37 54 chr5 24518433 24519029 -175111121 - MLT1E LTR MaLR -7 586 1 189 298 202 29 chr5 24519513 24519617 -175110533 - MIR SINE MIR -93 169 48 1223 242 54 84 chr5 24519754 24520102 -175110048 - MLT2B3 LTR ERVL 0 554 220 5017 114 5 52 chr5 24520102 24520921 -175109229 + LTR17 LTR ERV1 1 780 0 1223 242 54 84 chr5 24520921 24521014 -175109136 - MLT2B3 LTR ERVL -334 220 126 2030 132 10 0 chr5 24521448 24521751 -175108399 + AluSq SINE Alu 1 306 -7 221 269 162 75 chr5 24522811 24522983 -175107167 - L2 LINE L2 -316 2956 2759 4639 27 7 0 chr5 24522983 24523537 -175106613 - L1PA4 LINE L1 0 6155 5598 221 269 162 75 chr5 24523537 24523588 -175106562 - L2 LINE L2 -513 2759 2714 2047 247 17 17 chr5 24524128 24524594 -175105556 + MER70A LTR ERVL 7 472 0 238 179 0 0 chr5 24525271 24525327 -175104823 + L1MC4 LINE L1 6648 6703 -1339 254 104 0 42 chr5 24525327 24525375 -175104775 + (TATATG)n Simple_repeat Simple_repeat 6 51 0 352 281 0 0 chr5 24525378 24525467 -175104683 + L1MC4 LINE L1 6615 6703 -1339 342 311 0 0 chr5 24525387 24525477 -175104673 - L1MC4 LINE L1 -1339 6703 6614 * 230 203 76 0 chr5 24525488 24525567 -175104583 + L1MC4 LINE L1 6615 6699 -1343 230 152 0 0 chr5 24525567 24525613 -175104537 + LTR66 LTR ERVL 394 439 -171 391 165 24 0 chr5 24525613 24525698 -175104452 + (TA)n Simple_repeat Simple_repeat 1 87 0 578 177 29 17 chr5 24525734 24525909 -175104241 + (CATA)n Simple_repeat Simple_repeat 4 180 0 183 205 0 0 chr5 24525912 24525951 -175104199 + (CA)n Simple_repeat Simple_repeat 2 40 0 243 0 0 0 chr5 24526716 24526743 -175103407 + (TG)n Simple_repeat Simple_repeat 2 28 0 1402 233 3 18 chr5 24526870 24527201 -175102949 + MLT1A1 LTR MaLR 29 354 -11 805 85 31 0 chr5 24527219 24527349 -175102801 + (GAAA)n Simple_repeat Simple_repeat 2 135 0 423 338 83 26 chr5 24527391 24527693 -175102457 - L2 LINE L2 -1606 1708 1390 328 162 176 0 chr5 24528306 24528374 -175101776 - MADE1 DNA Mariner 0 80 1 22 35 0 0 chr5 24528380 24528409 -175101741 + AT_rich Low_complexity Low_complexity 1 29 0 2102 112 0 0 chr5 24528456 24528780 -175101370 - AluSq SINE Alu 0 324 1 1355 193 55 80 chr5 24528996 24529058 -175101092 + MLT1B LTR MaLR 1 63 -327 2057 189 30 32 chr5 24529058 24529492 -175100658 - Tigger2a DNA MER2_type -1 433 1 1355 193 55 80 chr5 24529492 24529829 -175100321 + MLT1B LTR MaLR 63 390 0 1951 123 0 4 chr5 24530058 24530334 -175099816 + AluSc SINE Alu 3 277 -32 360 64 0 0 chr5 24530334 24530381 -175099769 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 2096 115 0 7 chr5 24530418 24530714 -175099436 + AluSx SINE Alu 1 294 -18 465 19 0 0 chr5 24530714 24530768 -175099382 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 888 275 27 27 chr5 24531041 24531339 -175098811 - MLT1D LTR MaLR -2 503 206 1112 257 13 10 chr5 24531459 24531759 -175098391 - MLT1J2-int LTR MaLR -768 603 303 1914 184 29 20 chr5 24531789 24532328 -175097822 + L1MA9 LINE L1 5590 6312 0 600 286 5 25 chr5 24532412 24532611 -175097539 - MLT1J2-int LTR MaLR -1174 197 3 293 212 30 0 chr5 24532614 24532680 -175097470 - MLT2F LTR ERVL -1 662 595 3454 234 22 0 chr5 24532681 24533440 -175096710 - ERVL LTR ERVL -3322 2442 1667 3593 259 28 26 chr5 24533670 24534182 -175095968 + ERVL LTR ERVL 2419 2935 -2829 3003 80 30 18 chr5 24534182 24534576 -175095574 + MLT2A1 LTR ERVL 1 402 -42 312 70 0 0 chr5 24534576 24534619 -175095531 + (TG)n Simple_repeat Simple_repeat 2 44 0 3003 80 30 18 chr5 24534619 24534663 -175095487 + MLT2A1 LTR ERVL 402 444 0 3593 259 28 26 chr5 24534663 24535139 -175095011 + ERVL LTR ERVL 2935 3409 -2355 194 314 144 17 chr5 24536164 24536282 -175093868 - L3b LINE CR1 -178 1405 1273 434 316 88 50 chr5 24536856 24537252 -175092898 - MLT1J2 LTR MaLR -24 426 16 330 328 16 0 chr5 24537386 24537511 -175092639 - MIR SINE MIR -12 250 124 356 217 26 72 chr5 24538720 24538872 -175091278 - MIR SINE MIR -31 231 87 3681 246 82 18 chr5 24538903 24539970 -175090180 + L1PA12 LINE L1 610 1713 -5868 315 0 0 0 chr5 24539971 24540006 -175090144 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1829 213 22 25 chr5 24540030 24540477 -175089673 + L1PA12 LINE L1 2402 2847 -4727 1328 175 12 4 chr5 24540474 24540720 -175089430 - THE1C-int LTR MaLR -1330 250 3 * 1704 167 58 25 chr5 24540724 24541083 -175089067 - THE1C LTR MaLR -4 371 1 2417 208 10 4 chr5 24541083 24541598 -175088552 + L1PA12 LINE L1 3333 3850 -3734 4511 104 23 0 chr5 24541601 24542262 -175087888 + L1PA12 LINE L1 5260 5935 -233 1164 153 0 5 chr5 24542318 24542507 -175087643 - L1PA11 LINE L1 -37 6137 5950 561 170 6 132 chr5 24542515 24542575 -175087575 - MIR SINE MIR -92 170 104 2828 6 0 0 chr5 24542575 24542886 -175087264 + AluYa5 SINE Alu 1 311 0 561 170 6 132 chr5 24542886 24542984 -175087166 - MIR SINE MIR -158 104 32 21 57 0 0 chr5 24543054 24543089 -175087061 + AT_rich Low_complexity Low_complexity 1 35 0 286 326 37 59 chr5 24543992 24544179 -175085971 - MER91B DNA MER1_type -5 185 3 1649 204 76 20 chr5 24544191 24544597 -175085553 + MSTB1 LTR MaLR 1 429 -3 29 28 0 0 chr5 24544961 24544997 -175085153 + AT_rich Low_complexity Low_complexity 1 36 0 2097 167 60 19 chr5 24545194 24545699 -175084451 - MLT2A2 LTR ERVL 0 554 1 2393 80 3 3 chr5 24546152 24546464 -175083686 - AluSp SINE Alu -1 312 1 1943 145 62 28 chr5 24546665 24547017 -175083133 - THE1B LTR MaLR 0 364 1 426 251 31 9 chr5 24547629 24547774 -175082376 - L1M4 LINE L1 -394 5853 5705 512 297 46 10 chr5 24547777 24547995 -175082155 - L1M4 LINE L1 -620 5613 5415 * 1023 253 55 62 chr5 24547987 24548923 -175081227 - L1MEc LINE L1 -2517 3698 839 876 204 30 25 chr5 24549282 24549483 -175080667 + MER6A DNA MER2_type 1 202 -403 941 149 0 0 chr5 24549483 24549631 -175080519 + MER6A DNA MER2_type 457 604 -1 701 190 22 49 chr5 24550506 24550690 -175079460 - MER53 DNA DNA 0 189 11 26 30 0 0 chr5 24551004 24551037 -175079113 + AT_rich Low_complexity Low_complexity 1 33 0 182 321 47 19 chr5 24551529 24551635 -175078515 + L2 LINE L2 2929 3037 -276 2225 119 0 0 chr5 24552351 24552661 -175077489 + AluSx SINE Alu 3 312 0 188 289 133 12 chr5 24552978 24553061 -175077089 - MIR SINE MIR -122 140 48 258 260 0 49 chr5 24555137 24555260 -175074890 - L1MC4 LINE L1 0 8042 7926 1668 187 167 8 chr5 24555553 24555912 -175074238 - MSTA LTR MaLR -11 417 2 5313 204 8 20 chr5 24555913 24556981 -175073169 - MSTA-int LTR MaLR 0 1580 526 782 268 93 12 chr5 24556992 24557421 -175072729 + L1ME1 LINE L1 4771 5234 -912 4576 169 71 5 chr5 24557423 24558254 -175071896 + MER4D LTR ERV1 1 886 -17 1314 264 124 60 chr5 24558380 24559179 -175070971 + L1ME1 LINE L1 5312 6161 -5 925 146 20 7 chr5 24559447 24559598 -175070552 + MER4E LTR ERV1 335 487 -292 1356 238 23 26 chr5 24559778 24560169 -175069981 - MLT1B LTR MaLR 0 390 1 230 316 88 18 chr5 24560207 24560321 -175069829 + MIR3 SINE MIR 36 157 -51 187 345 106 18 chr5 24562616 24562729 -175067421 - MIR SINE MIR -124 138 16 274 296 0 34 chr5 24563212 24563300 -175066850 + MIR SINE MIR 174 258 -4 462 368 66 22 chr5 24563838 24564248 -175065902 - LTR16A LTR ERVL 0 450 23 344 341 51 46 chr5 24564821 24565038 -175065112 + MIR SINE MIR 45 262 0 351 0 0 0 chr5 24565234 24565273 -175064877 + (TA)n Simple_repeat Simple_repeat 1 39 0 3859 41 0 0 chr5 24565273 24565735 -175064415 - L1PA4 LINE L1 -15 6140 5679 1902 171 9 6 chr5 24565773 24566117 -175064033 - L1PA15 LINE L1 -6 6159 5815 1332 49 0 12 chr5 24566149 24566311 -175063839 + AluY SINE Alu 1 160 -151 7496 199 43 17 chr5 24566312 24567731 -175062419 - L1PA15 LINE L1 -363 5802 4308 2328 64 3 49 chr5 24567731 24568057 -175062093 + AluY SINE Alu 1 311 0 7496 199 43 17 chr5 24568057 24568859 -175061291 - L1PA15 LINE L1 -1857 4308 3529 3791 219 52 9 chr5 24568945 24569842 -175060308 - L1MD2 LINE L1 -28 7142 6207 1613 236 54 58 chr5 24570010 24570159 -175059991 + L1ME1 LINE L1 4672 4820 -1326 1977 168 31 11 chr5 24570159 24570516 -175059634 - THE1B LTR MaLR 0 364 1 1613 236 54 58 chr5 24570516 24571018 -175059132 + L1ME1 LINE L1 4820 5320 -826 47 0 0 0 chr5 24571018 24571065 -175059085 + AT_rich Low_complexity Low_complexity 1 47 0 2474 245 75 3 chr5 24571081 24571788 -175058362 + L1ME1 LINE L1 5330 6087 -79 1582 171 59 39 chr5 24572363 24572720 -175057430 - THE1B LTR MaLR 0 364 1 8484 162 21 40 chr5 24572720 24574328 -175055822 - THE1B-int LTR MaLR -1 1579 3 1450 177 75 39 chr5 24574330 24574692 -175055458 - THE1C LTR MaLR 0 375 1 2286 98 3 0 chr5 24575073 24575370 -175054780 + AluSp SINE Alu 1 298 -15 16940 126 5 8 chr5 24575407 24578950 -175051200 - L1PA8A LINE L1 -29 6102 2570 1056 198 33 5 chr5 24578986 24579198 -175050952 + MER20 DNA MER1_type 2 219 0 493 241 71 61 chr5 24579471 24579562 -175050588 + L1ME1 LINE L1 2781 2870 -3276 668 160 8 8 chr5 24579562 24579693 -175050457 + L1MA6 LINE L1 6163 6293 -7 493 241 71 61 chr5 24579693 24579896 -175050254 + L1ME1 LINE L1 2870 3078 -3068 24 32 0 0 chr5 24579925 24579956 -175050194 + AT_rich Low_complexity Low_complexity 1 31 0 241 215 15 15 chr5 24579959 24580024 -175050126 - L1MD2 LINE L1 -873 6084 6020 933 236 148 116 chr5 24580165 24580887 -175049263 + L1ME1 LINE L1 5404 6148 -18 31 0 0 0 chr5 24582659 24582690 -175047460 + AT_rich Low_complexity Low_complexity 1 31 0 184 77 96 0 chr5 24583398 24583450 -175046700 + GA-rich Low_complexity Low_complexity 3 59 0 356 191 16 24 chr5 24583453 24583579 -175046571 + G-rich Low_complexity Low_complexity 5 129 0 324 314 84 42 chr5 24584471 24584875 -175045275 + L1M4 LINE L1 2558 2978 -3168 1754 236 50 28 chr5 24585352 24585915 -175044235 - L1MD2 LINE L1 -2080 4877 4303 1332 250 80 28 chr5 24585923 24586211 -175043939 - L1MD2 LINE L1 -5854 1005 687 294 29 0 0 chr5 24586211 24586246 -175043904 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1332 250 80 28 chr5 24586246 24586381 -175043769 - L1MD2 LINE L1 -6172 687 560 194 62 31 0 chr5 24586456 24586488 -175043662 + (GA)n Simple_repeat Simple_repeat 2 34 0 1063 233 110 36 chr5 24586562 24586871 -175043279 + L1M4b LINE L1 13 344 -6515 21 57 0 0 chr5 24587029 24587064 -175043086 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 24587649 24587680 -175042470 + AT_rich Low_complexity Low_complexity 1 31 0 576 255 119 100 chr5 24588056 24588477 -175041673 + MLT1A2 LTR MaLR 17 374 0 205 222 42 42 chr5 24588626 24588698 -175041452 + L2 LINE L2 3234 3305 -8 225 51 102 85 chr5 24589554 24589613 -175040537 - L1PA10 LINE L1 -2 6166 6107 413 221 16 49 chr5 24589657 24589719 -175040431 - MER20 DNA MER1_type 0 219 161 1963 186 53 17 chr5 24589719 24590132 -175040018 + MSTA LTR MaLR 1 428 0 413 221 16 49 chr5 24590132 24590191 -175039959 - MER20 DNA MER1_type -58 161 102 1813 158 57 3 chr5 24590191 24590507 -175039643 - MER1B DNA MER1_type -1 336 4 198 398 91 8 chr5 24590756 24590997 -175039153 - L2 LINE L2 -908 2406 2146 30 45 0 0 chr5 24591249 24591293 -175038857 + AT_rich Low_complexity Low_complexity 1 44 0 1782 153 58 9 chr5 24592102 24592429 -175037721 + MER61A LTR ERV1 1 343 0 222 105 0 0 chr5 24593454 24593492 -175036658 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 314 359 59 48 chr5 24593611 24593965 -175036185 - L1MEd LINE L1 -5492 627 270 380 350 172 13 chr5 24594502 24594962 -175035188 - L3 LINE CR1 -77 1500 968 27 81 0 0 chr5 24595871 24595933 -175034217 + AT_rich Low_complexity Low_complexity 1 62 0 200 313 42 0 chr5 24596004 24596100 -175034050 + MIR SINE MIR 127 226 -36 237 173 0 39 chr5 24596223 24596275 -175033875 - MER76 LTR ERV -631 57 8 21 36 0 0 chr5 24596283 24596311 -175033839 + AT_rich Low_complexity Low_complexity 1 28 0 1657 121 23 23 chr5 24596360 24596624 -175033526 + AluSp SINE Alu 3 266 -47 550 143 0 27 chr5 24596646 24596758 -175033392 + (GAAA)n Simple_repeat Simple_repeat 3 111 0 725 61 10 0 chr5 24596863 24596962 -175033188 + (GGAA)n Simple_repeat Simple_repeat 3 102 0 718 223 76 65 chr5 24597677 24598051 -175032099 + L1M4 LINE L1 2760 3141 -3005 3057 130 6 6 chr5 24598051 24598536 -175031614 - L1PB2 LINE L1 -4 6147 5663 718 223 76 65 chr5 24598536 24598622 -175031528 + L1M4 LINE L1 3141 3225 -2921 316 261 103 18 chr5 24598713 24598878 -175031272 + L1M4 LINE L1 3338 3516 -2630 1275 225 10 24 chr5 24598883 24599007 -175031143 + AluJo SINE Alu 1 125 -187 252 0 0 0 chr5 24599007 24599035 -175031115 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1275 225 10 24 chr5 24599035 24599203 -175030947 + AluJo SINE Alu 125 289 -23 235 224 86 35 chr5 24599220 24599336 -175030814 + L1M4 LINE L1 3510 3631 -2515 30 27 0 0 chr5 24599409 24599446 -175030704 + AT_rich Low_complexity Low_complexity 1 37 0 2566 101 3 0 chr5 24599737 24600103 -175030047 - L1PB1 LINE L1 0 6151 5785 290 45 36 80 chr5 24600107 24600219 -175029931 + (TA)n Simple_repeat Simple_repeat 2 108 0 3289 101 8 12 chr5 24600219 24600716 -175029434 - L1PB1 LINE L1 -362 5789 5295 676 173 0 0 chr5 24600716 24600826 -175029324 + FRAM SINE Alu 1 105 -71 375 105 0 0 chr5 24600853 24600910 -175029240 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 709 185 81 0 chr5 24601047 24601220 -175028930 - MER53 DNA DNA 0 189 3 857 269 20 5 chr5 24601224 24601425 -175028725 + MER58A DNA MER1_type 21 224 0 252 289 134 35 chr5 24601995 24602137 -175028013 - L2 LINE L2 0 3313 3158 613 168 87 40 chr5 24602419 24602568 -175027582 - AluJb SINE Alu -27 285 130 360 0 0 0 chr5 24602569 24602609 -175027541 + (TG)n Simple_repeat Simple_repeat 2 41 0 294 76 114 0 chr5 24602615 24602747 -175027403 + (TA)n Simple_repeat Simple_repeat 1 147 0 24 85 0 0 chr5 24603376 24603435 -175026715 + AT_rich Low_complexity Low_complexity 1 59 0 1986 116 10 23 chr5 24604853 24605155 -175024995 + AluSp SINE Alu 1 298 -15 25 31 0 0 chr5 24605163 24605195 -175024955 + AT_rich Low_complexity Low_complexity 1 32 0 15862 184 43 14 chr5 24605270 24612696 -175017454 + L1MA2 LINE L1 15 7723 0 189 0 0 0 chr5 24613067 24613088 -175017062 + (A)n Simple_repeat Simple_repeat 1 21 0 345 308 103 0 chr5 24613904 24614021 -175016129 - L2 LINE L2 -1 3312 3184 30 27 0 0 chr5 24615042 24615079 -175015071 + AT_rich Low_complexity Low_complexity 1 37 0 2005 137 0 0 chr5 24615114 24615398 -175014752 - AluSg SINE Alu -24 286 3 1872 169 29 8 chr5 24615474 24615858 -175014292 - L1MA8 LINE L1 -7 6284 5893 278 0 54 0 chr5 24615864 24615901 -175014249 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 797 272 31 9 chr5 24617660 24617884 -175012266 + MIR SINE MIR 31 259 -3 218 353 168 0 chr5 24618033 24618152 -175011998 + L2 LINE L2 3125 3263 -9 2320 73 0 0 chr5 24620137 24620468 -175009682 - AluY SINE Alu 0 331 1 2215 138 69 12 chr5 24620705 24621110 -175009040 + MSTA LTR MaLR 1 428 0 189 107 0 0 chr5 24621299 24621327 -175008823 + (CGGGG)n Simple_repeat Simple_repeat 1 28 0 332 377 49 12 chr5 24623566 24623810 -175006340 + L2 LINE L2 2127 2379 -935 22 56 0 0 chr5 24624225 24624261 -175005889 + AT_rich Low_complexity Low_complexity 1 36 0 28 48 0 0 chr5 24624297 24624339 -175005811 + AT_rich Low_complexity Low_complexity 1 42 0 1554 171 3 52 chr5 24625369 24625678 -175004472 - AluJo SINE Alu -18 294 1 21 0 0 0 chr5 24626132 24626153 -175003997 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr5 24626163 24626198 -175003952 + (TC)n Simple_repeat Simple_repeat 2 36 0 275 95 0 32 chr5 24626244 24626307 -175003843 - LTR66 LTR ERVL -171 439 379 2068 135 3 3 chr5 24626841 24627137 -175003013 + AluSx SINE Alu 1 296 -16 4373 177 18 55 chr5 24629461 24630553 -174999597 - L1MB1 LINE L1 -1 6167 5096 1293 221 5 63 chr5 24630549 24630929 -174999221 + L1 LINE L1 4410 4767 -1379 * 1340 219 21 53 chr5 24630937 24631194 -174998956 + MER74C LTR ERVL 131 376 -84 1904 129 28 0 chr5 24631194 24631480 -174998670 - AluSx SINE Alu -15 297 4 1340 219 21 53 chr5 24631480 24631560 -174998590 + MER74C LTR ERVL 376 457 -3 180 0 0 0 chr5 24632837 24632857 -174997293 + (T)n Simple_repeat Simple_repeat 1 20 0 267 133 0 0 chr5 24633919 24633964 -174996186 + (TG)n Simple_repeat Simple_repeat 1 45 0 963 235 98 15 chr5 24633983 24634301 -174995849 + L1MB7 LINE L1 5831 6174 -10 295 275 78 115 chr5 24635440 24635735 -174994415 + MLT1H LTR MaLR 110 393 -156 7507 33 0 0 chr5 24636055 24637522 -174992628 - L1PA4 LINE L1 -3 6152 4686 8582 22 1 0 chr5 24637522 24638531 -174991619 + L1PA4 LINE L1 3698 4707 -1439 24 0 0 0 chr5 24638891 24638915 -174991235 + AT_rich Low_complexity Low_complexity 1 24 0 3431 34 0 0 chr5 24638961 24639374 -174990776 + L1PA4 LINE L1 5738 6150 -5 1130 211 0 38 chr5 24640341 24640602 -174989548 - MLT1D LTR MaLR -1 504 254 1411 165 55 4 chr5 24640625 24640880 -174989270 + AluJb SINE Alu 1 268 -44 189 0 0 0 chr5 24640931 24640952 -174989198 + (TAA)n Simple_repeat Simple_repeat 1 21 0 941 242 4 37 chr5 24640952 24641196 -174988954 - MLT1D LTR MaLR -388 238 3 435 296 9 0 chr5 24741261 24741376 -174888774 - L1MEc LINE L1 -6150 246 131 21 0 0 0 chr5 24741401 24741422 -174888728 + AT_rich Low_complexity Low_complexity 1 21 0 354 282 19 19 chr5 24742150 24742253 -174887897 - L2 LINE L2 -2 3311 3209 22 56 0 0 chr5 24742432 24742468 -174887682 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5 24742874 24742910 -174887240 + AT_rich Low_complexity Low_complexity 1 36 0 304 216 32 24 chr5 24743069 24743194 -174886956 + (TA)n Simple_repeat Simple_repeat 2 127 0 216 319 49 49 chr5 24743276 24743439 -174886711 - L2 LINE L2 0 3313 3151 23 33 0 0 chr5 24743662 24743692 -174886458 + AT_rich Low_complexity Low_complexity 1 30 0 961 307 97 17 chr5 24744234 24744648 -174885502 + L1M2 LINE L1 4 450 -6399 1224 254 0 43 chr5 24745384 24745687 -174884463 + L1PA16 LINE L1 444 733 -6116 6622 250 88 31 chr5 24746115 24746988 -174883162 + L1PA16 LINE L1 1415 2237 -4612 2220 164 76 0 chr5 24746988 24747384 -174882766 - MSTB LTR MaLR 0 426 1 6622 250 88 31 chr5 24747384 24747595 -174882555 + L1PA16 LINE L1 2237 2435 -4414 1632 210 7 3 chr5 24747595 24747904 -174882246 + AluJb SINE Alu 1 310 -2 6622 250 88 31 chr5 24747904 24750632 -174879518 + L1PA16 LINE L1 2435 5691 -1158 420 133 57 203 chr5 24750630 24750788 -174879362 + L1 LINE L1 3589 3723 -2423 * 5156 146 9 28 chr5 24750790 24751998 -174878152 + L1PA16 LINE L1 5678 6866 -3 230 333 0 34 chr5 24752247 24752364 -174877786 - MIR SINE MIR -13 249 137 938 241 89 40 chr5 24752564 24752912 -174877238 - MLT1A1 LTR MaLR 0 365 1 25 0 0 0 chr5 24754048 24754073 -174876077 + AT_rich Low_complexity Low_complexity 1 25 0 439 235 52 46 chr5 24754133 24754286 -174875864 - MER5A DNA MER1_type -6 183 30 1357 259 41 47 chr5 24754306 24754793 -174875357 + MLT1D LTR MaLR 13 496 -9 2139 118 0 0 chr5 24754879 24755176 -174874974 + AluSg SINE Alu 1 297 -13 43 20 0 0 chr5 24755653 24755703 -174874447 + AT_rich Low_complexity Low_complexity 1 50 0 1560 187 49 38 chr5 24757042 24757411 -174872739 - THE1C LTR MaLR 0 375 3 9932 128 16 30 chr5 24757413 24759011 -174871139 - THE1C-int LTR MaLR 0 1580 5 1980 148 32 37 chr5 24759016 24759393 -174870757 - THE1C LTR MaLR 0 375 1 1681 332 163 24 chr5 24759405 24761103 -174869047 - L2 LINE L2 -12 3301 1367 191 298 31 15 chr5 24761336 24761411 -174868739 + MIR SINE MIR 73 149 -59 289 233 19 58 chr5 24761572 24761675 -174868475 + LTR37B LTR ERV1 203 301 -167 * 573 207 69 25 chr5 24761665 24761868 -174868282 + LTR37B LTR ERV1 257 468 0 26 0 0 0 chr5 24761966 24761992 -174868158 + AT_rich Low_complexity Low_complexity 1 26 0 2393 69 0 7 chr5 24762180 24762486 -174867664 - AluY SINE Alu -7 304 1 1446 211 84 96 chr5 24762962 24763474 -174866676 + LTR53 LTR ERVL 14 519 0 765 110 0 0 chr5 24763528 24763646 -174866504 + (TCCA)n Simple_repeat Simple_repeat 1 118 0 22 0 0 0 chr5 24763755 24763777 -174866373 + AT_rich Low_complexity Low_complexity 1 22 0 296 286 0 22 chr5 24763947 24764038 -174866112 - L2 LINE L2 0 3313 3225 595 328 44 22 chr5 24764204 24764524 -174865626 - L2 LINE L2 -393 2921 2595 21 100 0 0 chr5 24764669 24764739 -174865411 + AT_rich Low_complexity Low_complexity 1 70 0 21 57 0 0 chr5 24765768 24765803 -174864347 + AT_rich Low_complexity Low_complexity 1 35 0 1959 120 0 4 chr5 24766434 24766708 -174863442 - AluSx SINE Alu -35 277 5 287 337 6 91 chr5 24769090 24769265 -174860885 + L2 LINE L2 353 512 -2802 372 43 0 0 chr5 24771040 24771086 -174859064 + (GA)n Simple_repeat Simple_repeat 2 47 0 305 319 88 0 chr5 24771171 24771284 -174858866 - MIR SINE MIR -74 188 66 24 0 0 0 chr5 24772462 24772486 -174857664 + AT_rich Low_complexity Low_complexity 1 24 0 358 337 17 23 chr5 24772670 24772842 -174857308 - L2 LINE L2 -233 3039 2869 22 0 0 0 chr5 24773705 24773727 -174856423 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 24774402 24774445 -174855705 + AT_rich Low_complexity Low_complexity 1 43 0 630 271 30 15 chr5 24774805 24775008 -174855142 + L1ME3A LINE L1 5922 6127 -43 231 125 0 0 chr5 24775202 24775242 -174854908 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr5 24775959 24775981 -174854169 + AT_rich Low_complexity Low_complexity 1 22 0 345 355 74 0 chr5 24776021 24776210 -174853940 - HERVL LTR ERVL -3600 2054 1852 504 286 97 31 chr5 24776292 24776551 -174853599 - MLT1I LTR MaLR -18 391 116 28 0 0 0 chr5 24778352 24778380 -174851770 + AT_rich Low_complexity Low_complexity 1 28 0 339 283 7 76 chr5 24779517 24779569 -174850581 - LTR65 LTR ERV1 0 669 615 2384 270 28 15 chr5 24779569 24780244 -174849906 + MER76 LTR ERV 5 688 0 339 283 7 76 chr5 24780244 24780336 -174849814 - LTR65 LTR ERV1 -54 615 535 1252 199 36 20 chr5 24780550 24780856 -174849294 - LTR65 LTR ERV1 -276 393 83 1554 211 140 24 chr5 24781487 24781938 -174848212 + MLT1D LTR MaLR 1 503 -2 32 26 0 0 chr5 24782380 24782419 -174847731 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 24783151 24783173 -174846977 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 24783359 24783380 -174846770 + AT_rich Low_complexity Low_complexity 1 21 0 541 345 103 11 chr5 24783525 24783876 -174846274 + L2 LINE L2 1931 2313 -1001 1499 168 84 19 chr5 24784416 24784738 -174845412 - MER61A LTR ERV1 0 343 1 26 50 0 0 chr5 24785284 24785324 -174844826 + AT_rich Low_complexity Low_complexity 1 40 0 183 339 17 0 chr5 24787354 24787413 -174842737 + L2 LINE L2 1251 1310 -2004 306 297 134 39 chr5 24787511 24787664 -174842486 + L2 LINE L2 1622 1759 -1555 2234 108 0 3 chr5 24787664 24787969 -174842181 + AluSp SINE Alu 1 304 -9 306 297 134 39 chr5 24787969 24788121 -174842029 + L2 LINE L2 1759 1956 -1358 197 65 32 0 chr5 24788127 24788158 -174841992 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 933 260 40 173 chr5 24788490 24788956 -174841194 + L2 LINE L2 2001 2308 -1005 2657 30 0 0 chr5 24788956 24789260 -174840890 + AluY SINE Alu 1 304 -7 933 260 40 173 chr5 24789260 24789906 -174840244 + L2 LINE L2 2308 3038 -275 1954 106 4 4 chr5 24789921 24790196 -174839954 + AluSc SINE Alu 3 277 -32 231 114 0 0 chr5 24790196 24790240 -174839910 + (TTAA)n Simple_repeat Simple_repeat 3 46 0 6186 58 58 11 chr5 24791200 24792090 -174838060 + L1PA7 LINE L1 5223 6153 -1 314 258 150 42 chr5 24792275 24792395 -174837755 + L2 LINE L2 3176 3308 -5 1213 217 134 93 chr5 24793295 24793344 -174836806 - MLT2B1 LTR ERVL -7 513 467 192 40 0 0 chr5 24793344 24793369 -174836781 + (CA)n Simple_repeat Simple_repeat 2 26 0 1213 217 134 93 chr5 24793369 24793812 -174836338 - MLT2B1 LTR ERVL -53 467 1 274 358 0 59 chr5 24794618 24794805 -174835345 + L2 LINE L2 2479 2654 -660 832 280 48 46 chr5 24794822 24795283 -174834867 - MLT1H LTR MaLR -8 541 41 288 330 20 20 chr5 24795666 24795766 -174834384 + L2 LINE L2 3214 3313 0 1334 219 29 4 chr5 24795903 24796197 -174833953 - AluJb SINE Alu 0 301 1 371 235 128 28 chr5 24796466 24796645 -174833505 + L1MC4 LINE L1 7699 7895 -147 300 70 0 0 chr5 24796646 24796689 -174833461 + (TG)n Simple_repeat Simple_repeat 2 44 0 253 281 16 0 chr5 24796695 24796759 -174833391 + GA-rich Low_complexity Low_complexity 2 66 0 225 0 0 0 chr5 24796887 24796912 -174833238 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 333 0 0 0 chr5 24796911 24796948 -174833202 + (CA)n Simple_repeat Simple_repeat 2 38 0 408 141 3 67 chr5 24796967 24797601 -174832549 + (TA)n Simple_repeat Simple_repeat 1 593 0 213 281 0 35 chr5 24798898 24798955 -174831195 - L3 LINE CR1 -2 1575 1521 239 312 72 22 chr5 24799856 24799994 -174830156 + MLT1J1 LTR MaLR 21 165 -281 657 282 67 20 chr5 24800736 24800991 -174829159 - LTR16A LTR ERVL -26 424 158 321 271 110 79 chr5 24802238 24802592 -174827558 + L1ME4a LINE L1 5599 5963 -158 3859 34 0 0 chr5 24802810 24803284 -174826866 - L1PA2 LINE L1 -793 5353 4880 7277 17 0 0 chr5 24803284 24804116 -174826034 + L1PA2 LINE L1 5323 6155 0 34 0 0 0 chr5 24804116 24804150 -174826000 + AT_rich Low_complexity Low_complexity 1 34 0 5676 203 23 3 chr5 24804749 24806704 -174823446 + L1PA15 LINE L1 3958 5953 -212 258 130 0 0 chr5 24806718 24806764 -174823386 + LTR66 LTR ERVL 394 439 -171 2643 117 23 5 chr5 24806788 24807181 -174822969 - MLT2A1 LTR ERVL -44 400 1 5886 105 21 40 chr5 24807181 24808088 -174822062 - HERVL-A1 LTR ERVL 0 5654 4765 8366 98 14 0 chr5 24808089 24809216 -174820934 - HERVL LTR ERVL -2285 3369 2227 5441 88 4 4 chr5 24809212 24809936 -174820214 - HERVL LTR ERVL -4929 725 2 * 301 275 11 11 chr5 24809968 24810059 -174820091 - L1MC4 LINE L1 -1339 6703 6613 261 138 0 35 chr5 24810161 24810219 -174819931 - L1MC4 LINE L1 -1339 6703 6648 2470 123 36 5 chr5 24810234 24810624 -174819526 - MLT2A1 LTR ERVL -41 403 2 556 188 38 30 chr5 24810628 24810761 -174819389 + L1PA15 LINE L1 6032 6165 0 223 227 30 15 chr5 24811247 24811313 -174818837 + CT-rich Low_complexity Low_complexity 5 71 0 1397 296 91 22 chr5 24811552 24811620 -174818530 + L1MC/D LINE L1 37 99 -6297 207 114 0 0 chr5 24811620 24811655 -174818495 + (CA)n Simple_repeat Simple_repeat 2 36 0 1397 296 91 22 chr5 24811655 24812302 -174817848 + L1MC/D LINE L1 99 801 -5595 * 1874 280 72 12 chr5 24812280 24813187 -174816963 + L1MC/D LINE L1 4575 5534 -743 695 287 54 16 chr5 24813204 24813522 -174816628 - MLT1G LTR MaLR -292 298 4 2834 10 0 0 chr5 24813973 24814284 -174815866 + AluYa5 SINE Alu 1 311 0 1151 187 37 8 chr5 24815142 24815388 -174814762 - L1MD2 LINE L1 -20 6339 6087 214 149 21 21 chr5 24815630 24815677 -174814473 + (TAA)n Simple_repeat Simple_repeat 2 48 0 23 0 0 0 chr5 24815799 24815822 -174814328 + AT_rich Low_complexity Low_complexity 1 23 0 195 162 0 0 chr5 24815897 24815934 -174814216 + (CA)n Simple_repeat Simple_repeat 2 38 0 2675 265 69 31 chr5 24815957 24816818 -174813332 + MER45B DNA AcHobo 4 910 -671 869 92 39 0 chr5 24816818 24816948 -174813202 + L1PA13 LINE L1 6028 6162 -1 2675 265 69 31 chr5 24816948 24817085 -174813065 + MER45B DNA AcHobo 910 1040 0 625 276 85 41 chr5 24817088 24817987 -174812163 + L1ME1 LINE L1 3765 4623 -1543 1386 187 38 54 chr5 24817987 24818303 -174811847 - AluJb SINE Alu 0 312 2 625 276 85 41 chr5 24818303 24819552 -174810598 + L1ME1 LINE L1 4623 6161 -5 233 278 78 37 chr5 24819874 24820065 -174810085 - L1MD2 LINE L1 -2350 5458 5260 327 343 62 37 chr5 24820120 24820473 -174809677 - L1MD2 LINE L1 -984 5162 4801 1903 132 7 0 chr5 24820547 24820819 -174809331 + AluSg SINE Alu 5 278 -32 21 57 0 0 chr5 24821115 24821150 -174809000 + AT_rich Low_complexity Low_complexity 1 35 0 207 162 0 0 chr5 24821238 24821275 -174808875 + (CA)n Simple_repeat Simple_repeat 2 38 0 1986 188 3 3 chr5 24823846 24824197 -174805953 + MER47A DNA MER2_type 16 366 0 649 292 182 23 chr5 24824306 24824614 -174805536 + MLT1G1 LTR MaLR 161 517 -78 715 246 45 6 chr5 24825476 24825655 -174804495 - MER58A DNA MER1_type -37 187 2 2362 78 3 3 chr5 24825774 24826081 -174804069 - AluSc SINE Alu -2 307 1 626 349 79 19 chr5 24826573 24827117 -174803033 - L2 LINE L2 -47 3266 2687 198 284 0 40 chr5 24827464 24827538 -174802612 - L2 LINE L2 -769 2545 2475 198 0 0 0 chr5 24827657 24827679 -174802471 + (TTA)n Simple_repeat Simple_repeat 3 24 0 582 15 0 0 chr5 24827701 24827768 -174802382 + L1PA4 LINE L1 5898 5964 -191 1762 112 14 25 chr5 24827886 24828164 -174801986 - THE1C LTR MaLR 0 375 101 1680 215 36 29 chr5 24828851 24829242 -174800908 - MSTD LTR MaLR 0 381 2 509 316 23 12 chr5 24830028 24830199 -174799951 + MER5B DNA MER1_type 6 178 0 1441 242 57 22 chr5 24830226 24830731 -174799419 - Charlie1b DNA MER1_type 0 523 1 21 0 0 0 chr5 24830840 24830861 -174799289 + AT_rich Low_complexity Low_complexity 1 21 0 2286 276 81 33 chr5 24830933 24832019 -174798131 - L1MC4a LINE L1 -4 7804 6667 203 278 14 0 chr5 24832499 24832571 -174797579 + (TA)n Simple_repeat Simple_repeat 1 73 0 2606 147 43 6 chr5 24833229 24833713 -174796437 - L1MA4 LINE L1 -398 5902 5401 1967 145 44 20 chr5 24833713 24834115 -174796035 + L1MA4 LINE L1 5875 6291 -9 3058 86 14 0 chr5 24834432 24834860 -174795290 - L1PA7 LINE L1 -8 6146 5713 246 282 0 42 chr5 24835380 24835451 -174794699 - L2 LINE L2 -1 3271 3204 727 246 174 0 chr5 24835807 24836014 -174794136 - MLT1D LTR MaLR 0 505 263 560 250 39 69 chr5 24836023 24836255 -174793895 + L1M4 LINE L1 4862 5086 -1060 7659 110 8 2 chr5 24836265 24838209 -174791941 - L1PA8 LINE L1 0 6172 4207 1029 242 17 0 chr5 24838222 24838453 -174791697 - MLT1D LTR MaLR -268 237 3 605 236 16 0 chr5 24838569 24838760 -174791390 + L1MD3 LINE L1 7800 7993 -2 4046 121 20 3 chr5 24839609 24840244 -174789906 + L1PA16 LINE L1 5512 6157 -9 25 65 0 0 chr5 24840244 24840290 -174789860 + AT_rich Low_complexity Low_complexity 1 46 0 24 0 0 0 chr5 24842228 24842252 -174787898 + AT_rich Low_complexity Low_complexity 1 24 0 408 331 140 0 chr5 24842349 24842485 -174787665 + MER52A LTR ERV1 670 824 -931 * 456 238 70 45 chr5 24842476 24842781 -174787369 + MER52A LTR ERV1 202 1232 -51 381 93 0 0 chr5 24844455 24844509 -174785641 + (TG)n Simple_repeat Simple_repeat 2 55 0 1564 184 13 33 chr5 24844953 24845257 -174784893 + AluJo SINE Alu 1 298 -14 24 0 0 0 chr5 24846865 24846889 -174783261 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr5 24847198 24847233 -174782917 + AT_rich Low_complexity Low_complexity 1 35 0 415 370 80 9 chr5 24847564 24847788 -174782362 - MIR SINE MIR -13 249 10 2496 71 0 0 chr5 24848134 24848444 -174781706 + AluY SINE Alu 1 310 -1 2262 109 3 0 chr5 24849393 24849697 -174780453 - AluSg SINE Alu -5 305 1 899 214 57 12 chr5 24850673 24850915 -174779235 + L1MA9 LINE L1 5452 5698 -470 639 230 27 4 chr5 24850922 24851083 -174779067 + L1M4 LINE L1 5643 5804 -370 24250 151 28 18 chr5 24851192 24857516 -174772634 + L1PA8A LINE L1 1 6446 0 2114 182 73 6 chr5 24857510 24857976 -174772174 + L1MA9 LINE L1 5814 6310 -2 * 198 222 0 0 chr5 24858274 24858328 -174771822 + (TA)n Simple_repeat Simple_repeat 1 54 0 25 0 0 0 chr5 24859119 24859144 -174771006 + AT_rich Low_complexity Low_complexity 1 25 0 317 367 58 60 chr5 24859532 24859963 -174770187 - L1ME LINE L1 -447 5723 5294 1108 193 79 73 chr5 24859963 24860331 -174769819 - L1MC3 LINE L1 0 8203 7834 6817 220 45 46 chr5 24860390 24861383 -174768767 - L1MC3 LINE L1 -494 7709 6717 2026 116 0 0 chr5 24861383 24861679 -174768471 + AluSc SINE Alu 3 298 0 6817 220 45 46 chr5 24861679 24863566 -174766584 - L1MC3 LINE L1 -1486 6717 4821 2010 131 6 10 chr5 24863622 24863935 -174766215 + AluSx SINE Alu 1 312 0 522 261 14 41 chr5 24863953 24864171 -174765979 - L1MC3 LINE L1 -2277 4287 4076 1156 211 5 33 chr5 24864171 24864536 -174765614 - LTR2 LTR ERV1 0 449 1 2930 254 117 25 chr5 24864536 24866358 -174763792 - L1MC3 LINE L1 -2485 4079 2426 2149 128 3 0 chr5 24866358 24866663 -174763487 + AluSx SINE Alu 1 306 -6 2930 254 117 25 chr5 24866663 24867903 -174762247 - L1MC3 LINE L1 -4138 2426 467 428 327 58 78 chr5 24868249 24868735 -174761415 - L1M4 LINE L1 -1994 4152 3677 22 35 0 0 chr5 24871111 24871140 -174759010 + AT_rich Low_complexity Low_complexity 1 29 0 31 26 0 0 chr5 24871317 24871355 -174758795 + AT_rich Low_complexity Low_complexity 1 38 0 236 197 0 30 chr5 24871377 24871443 -174758707 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 1948 207 32 82 chr5 24872850 24873448 -174756702 - MLT2B3 LTR ERVL 0 520 1 2177 120 3 0 chr5 24873795 24874104 -174756046 - AluSx SINE Alu -2 310 1 31 26 0 0 chr5 24874746 24874784 -174755366 + AT_rich Low_complexity Low_complexity 1 38 0 2025 126 3 7 chr5 24874885 24875195 -174754955 - AluSc SINE Alu 0 309 1 267 31 0 0 chr5 24876047 24876079 -174754071 + (A)n Simple_repeat Simple_repeat 1 32 0 263 289 11 0 chr5 24876168 24876258 -174753892 - LTR67 LTR ERVL -9 548 458 21 36 0 0 chr5 24877201 24877229 -174752921 + AT_rich Low_complexity Low_complexity 1 28 0 1663 149 2 140 chr5 24877257 24877679 -174752471 + THE1B LTR MaLR 1 364 0 9973 131 7 28 chr5 24877679 24879293 -174750857 + THE1B-int LTR MaLR 1 1580 0 1139 159 24 19 chr5 24879293 24879501 -174750649 + THE1C LTR MaLR 1 209 -166 27 29 0 0 chr5 24880162 24880196 -174749954 + AT_rich Low_complexity Low_complexity 1 34 0 337 263 25 107 chr5 24881755 24881998 -174748152 - L2 LINE L2 -16 3297 3075 249 169 31 0 chr5 24882838 24882903 -174747247 + MER53 DNA DNA 95 161 -28 191 227 23 0 chr5 24883258 24883302 -174746848 - L2 LINE L2 0 3313 3269 235 161 0 36 chr5 24883426 24883482 -174746668 + MLT1C LTR MaLR 1 54 -336 613 300 46 23 chr5 24883523 24883783 -174746367 + MLT1C LTR MaLR 200 465 -2 21 57 0 0 chr5 24884047 24884082 -174746068 + AT_rich Low_complexity Low_complexity 1 35 0 426 53 0 0 chr5 24884976 24885033 -174745117 + (TG)n Simple_repeat Simple_repeat 2 58 0 222 343 15 0 chr5 24885104 24885171 -174744979 - MIR SINE MIR -184 78 11 27 29 0 0 chr5 24885762 24885796 -174744354 + AT_rich Low_complexity Low_complexity 1 34 0 300 102 0 0 chr5 24885873 24885922 -174744228 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 1926 97 0 0 chr5 24885922 24886189 -174743961 - L1PA8 LINE L1 -17 6155 5889 186 43 0 0 chr5 24887148 24887171 -174742979 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 5657 70 16 1 chr5 24887619 24888075 -174742075 - L1PA7 LINE L1 0 6154 5681 303 28 0 0 chr5 24888075 24888111 -174742039 + (CA)n Simple_repeat Simple_repeat 2 37 0 5657 70 16 1 chr5 24888111 24888397 -174741753 - L1PA7 LINE L1 -473 5681 5401 245 302 167 29 chr5 24888397 24888672 -174741478 - L2 LINE L2 -1165 2149 1837 1071 231 21 87 chr5 24888863 24889395 -174740755 - LTR5 LTR ERVK 0 969 473 23 54 0 0 chr5 24890026 24890063 -174740087 + AT_rich Low_complexity Low_complexity 1 37 0 876 226 136 31 chr5 24890388 24890843 -174739307 + MER114 LTR ERV 86 588 -60 472 15 31 0 chr5 24890912 24890977 -174739173 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2228 108 0 0 chr5 24890978 24891275 -174738875 - AluSx SINE Alu -14 298 2 531 257 0 0 chr5 24891327 24891440 -174738710 + FLAM_A SINE Alu 6 118 -24 1092 247 123 72 chr5 24892204 24893202 -174736948 - Zaphod DNA AcHobo -350 3681 2633 553 147 6 159 chr5 24893202 24893365 -174736785 - MER1B DNA MER1_type 0 339 202 1172 268 100 33 chr5 24893399 24894066 -174736084 - Zaphod DNA AcHobo -1402 2629 1918 462 263 21 27 chr5 24894143 24894329 -174735821 - Zaphod DNA AcHobo -2890 1141 957 216 195 12 61 chr5 24894977 24895059 -174735091 + (TATATG)n Simple_repeat Simple_repeat 4 81 0 1075 276 77 85 chr5 24896303 24896878 -174733272 + MLT1G LTR MaLR 21 590 0 228 173 0 19 chr5 24897021 24897073 -174733077 + (CATA)n Simple_repeat Simple_repeat 2 52 0 2177 81 3 7 chr5 24897130 24897414 -174732736 - AluSp SINE Alu -30 283 1 1174 123 6 6 chr5 24897439 24897618 -174732532 - AluSx SINE Alu -133 179 1 260 138 35 35 chr5 24897618 24897676 -174732474 + MLT1F LTR MaLR 478 535 -7 1054 262 108 35 chr5 24897705 24898270 -174731880 - L1ME2 LINE L1 -251 6708 6103 440 308 73 57 chr5 24898394 24899587 -174730563 - L1ME2 LINE L1 -4580 2542 1140 260 317 59 30 chr5 24900033 24900235 -174729915 - L1ME2 LINE L1 -6063 360 153 3377 192 29 67 chr5 24900296 24901303 -174728847 + LTR5 LTR ERVK 1 969 0 499 118 0 0 chr5 24901305 24901381 -174728769 - tRNA-Lys-AAG tRNA tRNA 0 76 1 21 0 0 0 chr5 24901495 24901516 -174728634 + AT_rich Low_complexity Low_complexity 1 21 0 677 308 100 59 chr5 24902235 24903289 -174726861 - L1MC4 LINE L1 -18 8024 6928 231 316 66 7 chr5 24903288 24903440 -174726710 - L1ME3A LINE L1 -11 6159 5999 * 363 118 40 0 chr5 24904191 24904267 -174725883 + (TA)n Simple_repeat Simple_repeat 2 80 0 528 147 49 0 chr5 24904336 24904438 -174725712 - L1MA10 LINE L1 0 6334 6228 3745 199 30 56 chr5 24904438 24905128 -174725022 + L1MA10 LINE L1 4789 5496 -838 1893 117 0 0 chr5 24905128 24905392 -174724758 + AluSq SINE Alu 35 298 -15 3745 199 30 56 chr5 24905392 24905955 -174724195 + L1MA10 LINE L1 5496 6073 -261 1261 206 45 75 chr5 24905955 24906098 -174724052 + MLT1A1 LTR MaLR 1 147 -218 2067 83 14 0 chr5 24906098 24906226 -174723924 + AluY SINE Alu 1 126 -183 195 42 0 0 chr5 24906226 24906250 -174723900 + (TA)n Simple_repeat Simple_repeat 2 25 0 2067 83 14 0 chr5 24906250 24906426 -174723724 + AluY SINE Alu 126 309 0 1261 206 45 75 chr5 24906426 24906655 -174723495 + MLT1A1 LTR MaLR 147 363 -2 3745 199 30 56 chr5 24906655 24906744 -174723406 + L1MA10 LINE L1 6073 6163 -171 2288 98 0 7 chr5 24906744 24907050 -174723100 + AluSx SINE Alu 4 307 -5 189 0 0 0 chr5 24907052 24907073 -174723077 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 225 0 0 0 chr5 24907072 24907097 -174723053 + (CA)n Simple_repeat Simple_repeat 2 26 0 3745 199 30 56 chr5 24907073 24907198 -174722952 + L1MA10 LINE L1 6164 6207 -127 512 155 26 22 chr5 24907309 24907443 -174722707 + MSTA LTR MaLR 8 123 -252 23 0 0 0 chr5 24909601 24909624 -174720526 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 24910459 24910503 -174719647 + AT_rich Low_complexity Low_complexity 1 44 0 32 26 0 0 chr5 24910722 24910761 -174719389 + AT_rich Low_complexity Low_complexity 1 39 0 1993 120 39 0 chr5 24911071 24911354 -174718796 + AluSg SINE Alu 6 299 -11 206 227 0 0 chr5 24911391 24911435 -174718715 + (TATG)n Simple_repeat Simple_repeat 1 44 0 3632 201 11 18 chr5 24911505 24912357 -174717793 + L1 LINE L1 3321 4166 -1980 1612 249 45 66 chr5 25012361 25012875 -174617275 + MER77 LTR ERV1 101 603 -2 447 19 0 0 chr5 25013499 25013551 -174616599 + (TA)n Simple_repeat Simple_repeat 2 53 0 243 157 0 0 chr5 25013671 25013722 -174616428 - HSATII Satellite Satellite -119 51 1 1114 124 5 9 chr5 25013733 25015280 -174614870 - HSATII Satellite Satellite -1 1540 1 939 105 17 12 chr5 25015307 25016057 -174614093 - HSATII Satellite Satellite 0 754 1 512 323 5 0 chr5 25016133 25016350 -174613800 + L1M4 LINE L1 2351 2568 -3578 363 296 40 62 chr5 25016864 25017040 -174613110 + L1MEc LINE L1 1242 1413 -4983 818 259 51 13 chr5 25017080 25017454 -174612696 + L1MEc LINE L1 2319 2706 -3509 466 210 23 28 chr5 25017549 25017725 -174612425 + CT-rich Low_complexity Low_complexity 3 177 0 272 255 19 6 chr5 25017736 25017893 -174612257 + CT-rich Low_complexity Low_complexity 2 160 0 591 188 24 0 chr5 25017912 25018077 -174612073 + CT-rich Low_complexity Low_complexity 3 171 0 381 88 38 25 chr5 25018098 25018178 -174611972 + CT-rich Low_complexity Low_complexity 4 84 0 21 0 0 0 chr5 25018192 25018213 -174611937 + AT_rich Low_complexity Low_complexity 1 21 0 931 272 49 91 chr5 25018273 25018550 -174611600 + MLT1D LTR MaLR 5 253 -252 1999 134 7 0 chr5 25018550 25018841 -174611309 + AluY SINE Alu 7 299 -12 931 272 49 91 chr5 25018841 25019070 -174611080 + MLT1D LTR MaLR 253 490 -15 1583 207 7 3 chr5 25020070 25020370 -174609780 + AluJb SINE Alu 11 311 -1 1061 115 4 10 chr5 25020786 25021481 -174608669 - HSATII Satellite Satellite -50 691 1 1176 123 9 11 chr5 25021492 25023357 -174606793 - HSATII Satellite Satellite -3 1860 1 1053 130 5 0 chr5 25023403 25024216 -174605934 - HSATII Satellite Satellite -7 817 1 962 147 3 0 chr5 25024253 25024641 -174605509 - HSATII Satellite Satellite 0 388 1 905 124 9 13 chr5 25024667 25025140 -174605010 - HSATII Satellite Satellite -2 471 1 1059 121 1 16 chr5 25025153 25025885 -174604265 - HSATII Satellite Satellite -33 721 1 1143 85 26 13 chr5 25025922 25026378 -174603772 - HSATII Satellite Satellite 0 461 1 801 120 21 9 chr5 25026408 25026738 -174603412 - HSATII Satellite Satellite 0 334 1 962 121 4 17 chr5 25026838 25027551 -174602599 + HSATII Satellite Satellite 1 703 -1 1091 117 6 23 chr5 25027566 25028499 -174601651 + HSATII Satellite Satellite 1 916 0 186 143 0 0 chr5 25028536 25028571 -174601579 + HSATII Satellite Satellite 10 44 -126 1110 118 12 13 chr5 25028599 25029482 -174600668 + HSATII Satellite Satellite 1 881 0 539 141 70 0 chr5 25029498 25029640 -174600510 + HSATII Satellite Satellite 1 152 -18 767 111 0 21 chr5 25029657 25029801 -174600349 + HSATII Satellite Satellite 30 170 0 692 126 63 0 chr5 25029817 25029976 -174600174 + HSATII Satellite Satellite 1 169 -1 763 106 62 0 chr5 25030016 25030176 -174599974 + HSATII Satellite Satellite 1 170 0 989 130 9 13 chr5 25030198 25032872 -174597278 + HSATII Satellite Satellite 1 2662 0 1041 130 0 12 chr5 25032890 25033367 -174596783 + HSATII Satellite Satellite 1 471 0 1052 138 8 11 chr5 25033386 25035048 -174595102 + HSATII Satellite Satellite 1 1658 -39 857 115 0 19 chr5 25035064 25035220 -174594930 + HSATII Satellite Satellite 1 153 -17 851 160 11 0 chr5 25035247 25035517 -174594633 + HSATII Satellite Satellite 1 273 -93 950 116 1 14 chr5 25035535 25036442 -174593708 + HSATII Satellite Satellite 1 895 -35 1011 120 13 7 chr5 25036542 25037884 -174592266 + HSATII Satellite Satellite 1 1350 -92 993 131 9 11 chr5 25037901 25038741 -174591409 + HSATII Satellite Satellite 1 838 0 830 123 0 18 chr5 25038769 25038932 -174591218 + HSATII Satellite Satellite 7 166 -4 888 129 8 18 chr5 25038971 25040135 -174590015 + HSATII Satellite Satellite 1 1152 -35 853 114 0 34 chr5 25040148 25040323 -174589827 + HSATII Satellite Satellite 2 170 0 892 120 31 23 chr5 25040348 25040613 -174589537 + HSATII Satellite Satellite 1 267 -27 994 122 14 17 chr5 25040640 25041171 -174588979 + HSATII Satellite Satellite 1 529 -9 1089 117 9 9 chr5 25041206 25041523 -174588627 + HSATII Satellite Satellite 1 317 0 647 89 57 0 chr5 25041535 25041659 -174588491 + HSATII Satellite Satellite 20 150 -20 1324 153 3 1 chr5 25041761 25050716 -174579434 + ALR/Alpha Satellite centromeric 1 8972 -50 1106 115 4 11 chr5 25050816 25051907 -174578243 + HSATII Satellite Satellite 1 1083 0 972 114 0 0 chr5 25051936 25052103 -174578047 + HSATII Satellite Satellite 4 170 0 1089 115 0 4 chr5 25052130 25052784 -174577366 + HSATII Satellite Satellite 1 651 -116 1068 123 18 13 chr5 25052802 25054484 -174575666 + HSATII Satellite Satellite 1 1690 0 1097 112 0 13 chr5 25054510 25055893 -174574257 + HSATII Satellite Satellite 1 1365 -7 447 215 0 0 chr5 25055876 25055997 -174574153 + (CACTC)n Simple_repeat Simple_repeat 4 124 0 * 498 70 0 0 chr5 25056076 25056147 -174574003 + (CATTC)n Simple_repeat Simple_repeat 5 75 0 1144 160 5 1 chr5 25056524 25065594 -174564556 + ALR/Alpha Satellite centromeric 1 9109 -36 603 147 4 35 chr5 25065607 25065875 -174564275 - HSATII Satellite Satellite -50 259 1 825 113 18 18 chr5 25065890 25066058 -174564092 - HSATII Satellite Satellite -1 169 2 881 124 12 20 chr5 25066069 25066825 -174563325 - HSATII Satellite Satellite -1 749 1 1034 99 0 17 chr5 25066852 25067024 -174563126 - HSATII Satellite Satellite -1 169 1 1032 146 16 2 chr5 25067063 25068375 -174561775 - HSATII Satellite Satellite 0 1329 1 981 118 2 19 chr5 25068412 25069280 -174560870 - HSATII Satellite Satellite -1 853 1 587 164 21 0 chr5 25069300 25069440 -174560710 - HSATII Satellite Satellite -27 143 1 804 134 23 15 chr5 25069467 25069868 -174560282 - HSATII Satellite Satellite -1 404 1 1197 117 9 12 chr5 25069891 25073614 -174556536 - HSATII Satellite Satellite -39 3709 1 1065 131 8 3 chr5 25073635 25074725 -174555425 - HSATII Satellite Satellite 0 1096 1 1074 133 5 4 chr5 25074741 25076085 -174554065 - HSATII Satellite Satellite -121 1345 1 871 136 8 15 chr5 25076120 25076605 -174553545 - HSATII Satellite Satellite -50 481 1 830 140 6 11 chr5 25076619 25076958 -174553192 - HSATII Satellite Satellite -98 337 1 870 124 0 0 chr5 25076986 25077139 -174553011 - HSATII Satellite Satellite -2 168 16 1011 125 1 12 chr5 25077154 25077880 -174552270 - HSATII Satellite Satellite -1 717 1 758 126 20 0 chr5 25077906 25078057 -174552093 - HSATII Satellite Satellite 0 170 17 795 151 0 0 chr5 25078073 25078232 -174551918 - HSATII Satellite Satellite -7 163 5 923 105 0 8 chr5 25078266 25078616 -174551534 - HSATII Satellite Satellite -14 347 1 1064 105 4 8 chr5 25078643 25079364 -174550786 - HSATII Satellite Satellite -77 718 1 803 107 21 0 chr5 25079376 25079516 -174550634 - HSATII Satellite Satellite -27 143 1 1122 129 5 4 chr5 25079535 25081762 -174548388 - HSATII Satellite Satellite 0 2228 1 943 115 3 16 chr5 25081788 25082161 -174547989 - HSATII Satellite Satellite -8 368 1 921 117 10 18 chr5 25082203 25083067 -174547083 - HSATII Satellite Satellite -3 857 1 950 102 17 0 chr5 25083113 25083467 -174546683 - HSATII Satellite Satellite 0 360 1 713 123 0 36 chr5 25083483 25083745 -174546405 - HSATII Satellite Satellite -1 252 1 34734 29 0 1 chr5 25083845 25088813 -174541337 + L1HS LINE L1 1191 6154 -1 1109 163 4 1 chr5 25088829 25098975 -174531175 + ALR/Alpha Satellite centromeric 1 10176 0 1945 62 3 7 chr5 25099080 25100109 -174530041 - L1P LINE L1 -4990 1156 4 312 212 15 0 chr5 25100109 25100175 -174529975 + ALR/Alpha Satellite centromeric 72 138 -33 1144 159 4 1 chr5 25100281 25104330 -174525820 + ALR/Alpha Satellite centromeric 1 4064 -32 1119 155 3 0 chr5 25104441 25106270 -174523880 - ALR/Alpha Satellite centromeric 0 1833 1 2148 128 74 12 chr5 25106371 25106708 -174523442 + THE1B LTR MaLR 7 364 0 1398 248 46 10 chr5 25106746 25107161 -174522989 + MER54A LTR ERVL 472 901 0 285 273 26 19 chr5 25108105 25108259 -174521891 + (TA)n Simple_repeat Simple_repeat 1 155 0 21 0 0 0 chr5 25108409 25108430 -174521720 + AT_rich Low_complexity Low_complexity 1 21 0 2225 189 104 11 chr5 25108993 25109533 -174520617 + LTR49 LTR ERV1 1 590 -5 1814 181 47 19 chr5 25109725 25110150 -174520000 + LTR56 LTR ERV1 9 445 0 505 243 138 11 chr5 25110289 25110478 -174519672 - MER20 DNA MER1_type -3 216 4 25 31 0 0 chr5 25110730 25110762 -174519388 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 25110977 25111005 -174519145 + AT_rich Low_complexity Low_complexity 1 28 0 3072 45 3 0 chr5 25111183 25111562 -174518588 + L1PA2 LINE L1 5770 6149 -6 651 191 30 0 chr5 25112708 25112839 -174517311 + MSTB1 LTR MaLR 1 135 -297 234 270 86 39 chr5 25112920 25113257 -174516893 - L1ME LINE L1 -4983 1222 870 367 330 73 53 chr5 25113261 25113618 -174516532 - L1ME LINE L1 -5487 909 546 1226 164 4 4 chr5 25113727 25113953 -174516197 - L1MB3 LINE L1 -1 6182 5957 377 363 63 9 chr5 25115548 25115836 -174514314 + L2 LINE L2 2748 3047 -266 2404 220 35 8 chr5 25115909 25116501 -174513649 - L1MB7 LINE L1 -16 6168 5561 4172 267 68 19 chr5 25116516 25118313 -174511837 - L1MB7 LINE L1 -729 5445 3565 28 0 0 0 chr5 25118322 25118350 -174511800 + AT_rich Low_complexity Low_complexity 1 28 0 572 257 139 32 chr5 25118484 25118758 -174511392 + MER77 LTR ERV1 323 599 -6 1600 223 18 0 chr5 25119390 25119731 -174510419 - MER7A DNA MER2_type 0 346 2 25 31 0 0 chr5 25119783 25119815 -174510335 + AT_rich Low_complexity Low_complexity 1 32 0 264 231 0 51 chr5 25120008 25120086 -174510064 + (TATG)n Simple_repeat Simple_repeat 3 76 0 21 36 0 0 chr5 25121009 25121037 -174509113 + AT_rich Low_complexity Low_complexity 1 28 0 985 126 8 20 chr5 25121217 25121941 -174508209 - HSATII Satellite Satellite 0 715 1 1020 127 8 5 chr5 25121968 25123232 -174506918 - HSATII Satellite Satellite 0 1268 1 1023 126 8 8 chr5 25123254 25125557 -174504593 - HSATII Satellite Satellite -23 2303 1 211 165 70 9 chr5 25125557 25125672 -174504478 + (CGAAT)n Simple_repeat Simple_repeat 4 125 0 918 141 5 4 chr5 25125676 25126314 -174503836 - HSATII Satellite Satellite -7 638 1 616 122 0 40 chr5 25126431 25126579 -174503571 - HSATII Satellite Satellite -28 142 1 849 91 15 15 chr5 25126639 25126842 -174503308 - HSATII Satellite Satellite -1 203 1 507 95 0 0 chr5 25126854 25126928 -174503222 - HSATII Satellite Satellite -76 94 21 1036 129 25 4 chr5 25126948 25127666 -174502484 - HSATII Satellite Satellite -7 733 1 651 170 0 0 chr5 25127702 25127855 -174502295 - HSATII Satellite Satellite 0 170 18 1220 100 26 11 chr5 25127873 25128416 -174501734 - HSATII Satellite Satellite 0 551 1 944 121 16 19 chr5 25128439 25129238 -174500912 - HSATII Satellite Satellite -23 796 1 797 133 14 14 chr5 25129340 25129771 -174500379 - HSATII Satellite Satellite 0 431 1 1032 124 6 3 chr5 25129789 25130821 -174499329 - HSATII Satellite Satellite 0 1035 1 945 130 9 0 chr5 25130834 25131138 -174499012 - HSATII Satellite Satellite 0 306 1 888 136 23 9 chr5 25131150 25131774 -174498376 - HSATII Satellite Satellite 0 632 1 1121 120 8 6 chr5 25131797 25133724 -174496426 - HSATII Satellite Satellite -1 1930 1 1023 139 4 8 chr5 25133747 25134502 -174495648 - HSATII Satellite Satellite -51 752 1 182 119 48 0 chr5 25134508 25134550 -174495600 + (GAATG)n Satellite Satellite 2 45 0 1061 108 0 5 chr5 25134560 25134767 -174495383 - HSATII Satellite Satellite 0 205 1 1002 126 11 15 chr5 25134796 25136408 -174493742 - HSATII Satellite Satellite -125 1605 1 595 346 3 3 chr5 25136483 25136798 -174493352 + L1M4 LINE L1 2349 2663 -3483 1963 227 40 71 chr5 25137942 25138564 -174491586 - MER77 LTR ERV1 -2 603 1 21 36 0 0 chr5 25138573 25138601 -174491549 + AT_rich Low_complexity Low_complexity 1 28 0 1086 128 11 8 chr5 25138758 25141928 -174488222 - HSATII Satellite Satellite -100 3180 1 983 103 9 13 chr5 25141939 25142403 -174487747 - HSATII Satellite Satellite -22 462 1 974 130 3 19 chr5 25142428 25144935 -174485215 - HSATII Satellite Satellite -21 2465 1 1041 112 10 19 chr5 25144954 25146036 -174484114 - HSATII Satellite Satellite -1 1071 1 895 103 0 34 chr5 25146059 25146234 -174483916 - HSATII Satellite Satellite -1 169 1 821 129 13 17 chr5 25146287 25146804 -174483346 - HSATII Satellite Satellite 0 514 1 962 132 12 0 chr5 25146853 25147314 -174482836 - HSATII Satellite Satellite 0 466 1 1131 104 13 8 chr5 25147330 25148749 -174481401 - HSATII Satellite Satellite -53 1425 1 1406 229 7 7 chr5 25149062 25149355 -174480795 + MLT1A1 LTR MaLR 73 365 0 280 276 21 35 chr5 25149590 25149735 -174480415 + L1MCa LINE L1 1253 1395 -5031 767 271 42 13 chr5 25149804 25150181 -174479969 + L1MCa LINE L1 2530 2917 -3509 578 209 19 9 chr5 25150275 25150918 -174479232 + CT-rich Low_complexity Low_complexity 1 648 0 21 0 0 0 chr5 25150933 25150954 -174479196 + AT_rich Low_complexity Low_complexity 1 21 0 1059 250 50 83 chr5 25151014 25151287 -174478863 + MLT1D LTR MaLR 5 255 -250 1871 143 7 7 chr5 25151287 25151581 -174478569 + AluSc SINE Alu 3 296 -13 1059 250 50 83 chr5 25151581 25151823 -174478327 + MLT1D LTR MaLR 255 503 -2 1426 227 4 4 chr5 25152816 25153094 -174477056 + AluJb SINE Alu 11 288 -24 22 0 0 0 chr5 25153094 25153116 -174477034 + AT_rich Low_complexity Low_complexity 1 22 0 1486 220 52 3 chr5 25154286 25154672 -174475478 + MER54A LTR ERVL 8 412 -489 2141 121 74 15 chr5 25154681 25155019 -174475131 + THE1B LTR MaLR 7 364 0 1257 256 48 10 chr5 25155057 25155471 -174474679 + MER54A LTR ERVL 472 901 0 279 267 20 27 chr5 25156416 25156562 -174473588 + (TA)n Simple_repeat Simple_repeat 1 145 0 25 31 0 0 chr5 25156713 25156745 -174473405 + AT_rich Low_complexity Low_complexity 1 32 0 2174 192 100 11 chr5 25157332 25157874 -174472276 + LTR49 LTR ERV1 1 590 -5 1822 177 51 19 chr5 25158062 25158492 -174471658 + LTR56 LTR ERV1 1 444 -1 347 229 12 0 chr5 25158633 25158716 -174471434 - MER20 DNA MER1_type -3 216 133 25 31 0 0 chr5 25159167 25159199 -174470951 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr5 25159403 25159442 -174470708 + AT_rich Low_complexity Low_complexity 1 39 0 1575 178 84 55 chr5 25159893 25159925 -174470225 + LTR49 LTR ERV1 1 31 -564 1909 133 7 4 chr5 25159925 25160203 -174469947 - AluSq SINE Alu -21 292 14 1575 178 84 55 chr5 25160203 25160585 -174469565 + LTR49 LTR ERV1 31 427 -168 211 148 16 16 chr5 25160619 25160680 -174469470 + (TA)n Simple_repeat Simple_repeat 1 61 0 254 253 44 0 chr5 25160680 25160771 -174469379 + LTR48 LTR ERV1 645 739 -48 26 64 0 0 chr5 25160905 25160952 -174469198 + AT_rich Low_complexity Low_complexity 1 47 0 706 156 31 0 chr5 25162185 25162313 -174467837 + MSTB1 LTR MaLR 1 132 -300 246 266 108 54 chr5 25162398 25162733 -174467417 - L1ME LINE L1 -4983 1222 870 320 346 64 55 chr5 25162737 25163098 -174467052 - L1ME LINE L1 -5487 909 546 1141 183 22 4 chr5 25163207 25163437 -174466713 - L1MB3 LINE L1 -1 6182 5949 286 269 65 106 chr5 25164763 25165008 -174465142 - L3 LINE CR1 -583 994 760 396 342 78 22 chr5 25165029 25165382 -174464768 + L2 LINE L2 2748 3123 -190 2353 217 53 7 chr5 25165389 25165969 -174464181 - L1MB7 LINE L1 -16 6168 5562 4041 270 73 20 chr5 25165985 25167771 -174462379 - L1MB7 LINE L1 -729 5445 3565 31 0 0 0 chr5 25167776 25167807 -174462343 + AT_rich Low_complexity Low_complexity 1 31 0 585 262 128 49 chr5 25167939 25168213 -174461937 + MER77 LTR ERV1 323 599 -6 1587 223 18 0 chr5 25168846 25169187 -174460963 - MER7A DNA MER2_type 0 346 2 26 30 0 0 chr5 25169238 25169271 -174460879 + AT_rich Low_complexity Low_complexity 1 33 0 303 265 0 24 chr5 25169458 25169541 -174460609 + (TATG)n Simple_repeat Simple_repeat 3 83 0 21 36 0 0 chr5 25170462 25170490 -174459660 + AT_rich Low_complexity Low_complexity 1 28 0 734 140 5 0 chr5 25170670 25170871 -174459279 - HSATII Satellite Satellite -13 202 1 962 131 0 9 chr5 25170899 25171221 -174458929 - HSATII Satellite Satellite -1 319 1 663 123 41 0 chr5 25171248 25171394 -174458756 - HSATII Satellite Satellite -1 169 18 1058 133 11 5 chr5 25171414 25172684 -174457466 - HSATII Satellite Satellite 0 1277 1 899 133 12 9 chr5 25172704 25173046 -174457104 - HSATII Satellite Satellite -1 343 1 739 147 13 13 chr5 25173059 25173294 -174456856 - HSATII Satellite Satellite 0 235 1 912 135 7 7 chr5 25173317 25174463 -174455687 - HSATII Satellite Satellite 0 1146 1 1016 119 6 17 chr5 25174496 25175212 -174454938 - HSATII Satellite Satellite -76 708 1 1065 113 0 0 chr5 25175231 25175544 -174454606 - HSATII Satellite Satellite -1 313 1 938 140 0 19 chr5 25175579 25175900 -174454250 - HSATII Satellite Satellite -23 315 1 214 118 0 59 chr5 25175910 25175978 -174454172 + (GAATG)n Satellite Satellite 2 65 0 866 118 12 17 chr5 25175978 25176499 -174453651 - HSATII Satellite Satellite 0 518 1 931 99 26 8 chr5 25176544 25176907 -174453243 - HSATII Satellite Satellite -1 369 1 844 113 17 12 chr5 25176925 25177172 -174452978 - HSATII Satellite Satellite -49 248 1 775 106 21 0 chr5 25177183 25177324 -174452826 - HSATII Satellite Satellite -18 152 9 3679 182 18 36 chr5 25277377 25278162 -174351988 - L1 LINE L1 -1862 4284 3514 419 278 57 36 chr5 25278216 25278464 -174351686 - L1ME3A LINE L1 -30 6140 5888 682 263 110 32 chr5 25278503 25278896 -174351254 - L1M3 LINE L1 -411 5751 5368 235 348 18 0 chr5 25278882 25279046 -174351104 - L1ME3A LINE L1 -728 5434 5268 * 260 209 134 0 chr5 25279241 25279308 -174350842 - MLT1G1 LTR MaLR -31 564 489 288 294 7 85 chr5 25279507 25279660 -174350490 - MLT1H LTR MaLR -342 207 67 367 262 46 46 chr5 25279894 25280157 -174349993 - L1ME3A LINE L1 -1302 4844 4582 1274 236 4 7 chr5 25280260 25280536 -174349614 - AluJo SINE Alu -37 275 1 293 238 119 31 chr5 25280650 25280810 -174349340 - L1M3 LINE L1 -1880 4266 4093 1203 256 87 76 chr5 25281142 25281810 -174348340 - L1MD2 LINE L1 -16 6343 5669 1836 151 39 36 chr5 25282996 25283360 -174346790 - MER47A DNA MER2_type 0 366 2 2236 199 34 2 chr5 25283586 25284054 -174346096 - MER52A LTR ERV1 -1 1754 1272 3847 126 62 101 chr5 25284054 25285038 -174345112 + pTR5 LTR ERV1 797 2021 -417 283 224 31 20 chr5 25285042 25285140 -174345010 + LTR30 LTR ERV1 544 642 -80 1466 101 5 5 chr5 25285143 25285360 -174344790 + pTR5 LTR ERV1 172 388 -2050 3820 217 115 17 chr5 25285360 25286255 -174343895 - MER52A LTR ERV1 -413 1342 360 486 253 188 6 chr5 25286243 25286413 -174343737 - MER52A LTR ERV1 -1554 201 1 * 199 320 0 0 chr5 25286429 25286479 -174343671 - L2 LINE L2 -6 3266 3217 2313 91 3 0 chr5 25286534 25286842 -174343308 + AluY SINE Alu 1 309 -2 233 239 11 125 chr5 25286992 25287168 -174342982 - L2 LINE L2 -1369 1945 1790 1038 213 15 56 chr5 25287347 25287615 -174342535 - AluJb SINE Alu -11 301 45 324 314 21 64 chr5 25289056 25289244 -174340906 - L2 LINE L2 -17 3296 3117 21 36 0 0 chr5 25289715 25289743 -174340407 + AT_rich Low_complexity Low_complexity 1 28 0 267 140 0 0 chr5 25290228 25290278 -174339872 + (TG)n Simple_repeat Simple_repeat 1 50 0 1846 139 17 0 chr5 25292053 25292340 -174337810 - AluSx SINE Alu -20 292 1 294 29 0 0 chr5 25292735 25292770 -174337380 + (TG)n Simple_repeat Simple_repeat 2 36 0 * 393 22 0 0 chr5 25292769 25292815 -174337335 + (TA)n Simple_repeat Simple_repeat 1 46 0 1984 131 3 0 chr5 25292829 25293119 -174337031 - AluSx SINE Alu -21 291 1 307 54 0 0 chr5 25293147 25293184 -174336966 - L1P LINE L1 -1895 4251 4215 3495 19 0 9 chr5 25293184 25293603 -174336547 + L1PA2 LINE L1 5737 6153 -2 22 35 0 0 chr5 25293651 25293680 -174336470 + AT_rich Low_complexity Low_complexity 1 29 0 195 146 0 0 chr5 25294237 25294278 -174335872 + (TG)n Simple_repeat Simple_repeat 2 42 0 309 361 101 27 chr5 25295286 25295865 -174334285 - L2 LINE L2 0 3313 2653 1617 188 3 29 chr5 25296453 25296761 -174333389 + AluJb SINE Alu 3 302 -10 28 48 0 0 chr5 25296894 25296936 -174333214 + AT_rich Low_complexity Low_complexity 1 42 0 2101 148 8 78 chr5 25296946 25297380 -174332770 - L1MA7 LINE L1 -18 6273 5810 1639 167 159 8 chr5 25297380 25297752 -174332398 - MSTA LTR MaLR 0 428 1 8718 152 19 36 chr5 25297752 25299357 -174330793 - MSTA-int LTR MaLR 0 1580 3 1877 154 133 13 chr5 25299358 25299740 -174330410 - MSTA LTR MaLR 0 428 1 2101 148 8 78 chr5 25299740 25299776 -174330374 - L1MA7 LINE L1 -421 5870 5833 246 175 48 0 chr5 25299776 25299839 -174330311 + L1MA7 LINE L1 5767 5832 -459 2067 140 48 28 chr5 25300928 25301285 -174328865 - THE1B LTR MaLR 0 364 1 1862 197 112 14 chr5 25301583 25302019 -174328131 + MLT1D LTR MaLR 27 505 0 225 65 0 0 chr5 25302212 25302243 -174327907 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1767 152 0 0 chr5 25302256 25302519 -174327631 - AluSx SINE Alu -41 271 9 2218 114 7 0 chr5 25302702 25303000 -174327150 + AluSc SINE Alu 1 300 -9 368 342 74 19 chr5 25303007 25303222 -174326928 + MIR SINE MIR 15 243 -19 27 62 0 0 chr5 25303252 25303300 -174326850 + AT_rich Low_complexity Low_complexity 1 48 0 1696 197 28 28 chr5 25303664 25304054 -174326096 - MLT1B LTR MaLR 0 390 1 294 29 0 0 chr5 25304486 25304521 -174325629 + (TG)n Simple_repeat Simple_repeat 2 36 0 265 273 66 71 chr5 25304525 25304708 -174325442 + L2 LINE L2 2684 2865 -449 309 51 0 0 chr5 25305461 25305500 -174324650 + (TA)n Simple_repeat Simple_repeat 1 39 0 1540 203 36 36 chr5 25305850 25306240 -174323910 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr5 25306346 25306367 -174323783 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 25306809 25306844 -174323306 + AT_rich Low_complexity Low_complexity 1 35 0 2158 104 0 23 chr5 25306954 25307263 -174322887 - AluSx SINE Alu -10 302 1 28 105 0 0 chr5 25308177 25308282 -174321868 + AT_rich Low_complexity Low_complexity 1 105 0 247 345 48 44 chr5 25309357 25309586 -174320564 - L1MC5 LINE L1 -64 7897 7668 187 356 127 50 chr5 25310056 25310631 -174319519 + L2 LINE L2 2356 2974 -340 1298 190 11 144 chr5 25310841 25311314 -174318836 - MLT2D LTR ERVL 0 414 5 29 78 0 0 chr5 25311793 25311857 -174318293 + AT_rich Low_complexity Low_complexity 1 64 0 2119 68 0 0 chr5 25311993 25312257 -174317893 + AluY SINE Alu 1 264 -47 11179 200 43 13 chr5 25312799 25315848 -174314302 - L1MA4A LINE L1 -10 7355 4146 216 0 0 0 chr5 25315848 25315872 -174314278 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 11179 200 43 13 chr5 25315872 25316771 -174313379 - L1MA4A LINE L1 -3219 4146 3275 25 0 0 0 chr5 25317008 25317033 -174313117 + AT_rich Low_complexity Low_complexity 1 25 0 204 40 0 0 chr5 25317190 25317215 -174312935 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 9246 146 40 8 chr5 25317216 25317681 -174312469 - L1PA10 LINE L1 -22 6461 6012 1698 179 3 17 chr5 25317681 25317982 -174312168 - AluSx SINE Alu -15 297 1 9246 146 40 8 chr5 25317982 25319104 -174311046 - L1PA10 LINE L1 -471 6012 4768 207 0 0 0 chr5 25319104 25319127 -174311023 + (TTA)n Simple_repeat Simple_repeat 2 24 0 9246 146 40 8 chr5 25319127 25319910 -174310240 - L1PA10 LINE L1 -1715 4768 4012 7163 205 14 11 chr5 25319903 25321460 -174308690 - L1PA10 LINE L1 -3562 2899 1338 * 1148 73 0 0 chr5 25321474 25321648 -174308502 - AluSc SINE Alu 0 319 146 5208 226 28 21 chr5 25321655 25322957 -174307193 - L1PA10 LINE L1 -4735 1140 1 378 191 2 0 chr5 25322960 25323048 -174307102 - L1MA4A LINE L1 -3928 3280 3192 1568 175 57 33 chr5 25323048 25323414 -174306736 + THE1C LTR MaLR 1 375 0 4685 157 68 48 chr5 25323416 25324377 -174305773 + THE1C-int LTR MaLR 3 982 -598 889 94 8 24 chr5 25324377 25324504 -174305646 + THE1C-int LTR MaLR 1203 1327 -253 1984 134 0 3 chr5 25324529 25324819 -174305331 - AluSc SINE Alu -19 290 2 1576 119 26 22 chr5 25324821 25325089 -174305061 + THE1C-int LTR MaLR 1312 1580 0 1448 157 106 40 chr5 25325089 25325439 -174304711 + THE1C LTR MaLR 1 373 -2 5939 251 97 30 chr5 25325441 25328240 -174301910 - L1MA4A LINE L1 -4013 3196 174 915 119 143 6 chr5 25328259 25328427 -174301723 + THE1B LTR MaLR 1 191 -173 328 289 91 47 chr5 25328828 25329081 -174301069 - L2 LINE L2 0 3313 3050 34 42 0 0 chr5 25329237 25329285 -174300865 + AT_rich Low_complexity Low_complexity 1 48 0 1516 152 31 66 chr5 25329778 25330090 -174300060 + AluJb SINE Alu 6 307 0 432 339 70 26 chr5 25330272 25330658 -174299492 + MLT1L LTR MaLR 213 615 0 2011 117 7 23 chr5 25331630 25331937 -174298213 - AluSq SINE Alu -1 312 11 3259 269 89 35 chr5 25331944 25333129 -174297021 + MSTD-int LTR MaLR 470 1718 -17 818 213 94 1 chr5 25333144 25333471 -174296679 + MSTD LTR MaLR 6 396 0 3546 78 0 2 chr5 25334386 25334859 -174295291 - L1PA8 LINE L1 0 6172 5701 276 271 62 42 chr5 25335063 25335159 -174294991 - MLT1J1 LTR MaLR -243 203 106 222 217 28 49 chr5 25335295 25335438 -174294712 + (TAA)n Simple_repeat Simple_repeat 1 140 0 1931 164 0 0 chr5 25335968 25336267 -174293883 - AluSx SINE Alu -13 299 1 21 0 0 0 chr5 25336277 25336298 -174293852 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 25337218 25337247 -174292903 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 25337792 25337820 -174292330 + AT_rich Low_complexity Low_complexity 1 28 0 2611 51 0 0 chr5 25338129 25338440 -174291710 - AluY SINE Alu 0 311 1 28 0 0 0 chr5 25338640 25338668 -174291482 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 25339615 25339647 -174290503 + AT_rich Low_complexity Low_complexity 1 32 0 2143 141 0 0 chr5 25339653 25339965 -174290185 - AluSx SINE Alu 0 312 1 1980 164 26 65 chr5 25340060 25340522 -174289628 + MER65A LTR ERV1 1 444 -1 636 171 20 7 chr5 25340541 25340693 -174289457 + L1MA4A LINE L1 6149 6302 -1 3879 240 55 43 chr5 25340693 25341749 -174288401 + MLT1A1-int LTR MaLR 667 1735 0 846 215 42 67 chr5 25341750 25342133 -174288017 + MLT1A1 LTR MaLR 2 421 -7 28 71 0 0 chr5 25342996 25343052 -174287098 + AT_rich Low_complexity Low_complexity 1 56 0 388 164 51 34 chr5 25343079 25343256 -174286894 + (TA)n Simple_repeat Simple_repeat 1 180 0 352 124 38 97 chr5 25343316 25343501 -174286649 + (TATAA)n Simple_repeat Simple_repeat 4 177 0 275 118 11 43 chr5 25343515 25343608 -174286542 + (TAA)n Simple_repeat Simple_repeat 3 92 0 220 163 31 51 chr5 25343612 25343710 -174286440 + (TA)n Simple_repeat Simple_repeat 1 96 0 221 163 20 0 chr5 25345163 25345212 -174284938 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 388 359 67 24 chr5 25345429 25345727 -174284423 + L1ME4a LINE L1 5508 5818 -303 1126 178 0 35 chr5 25346039 25346241 -174283909 + MER1B DNA MER1_type 1 195 -102 487 267 103 6 chr5 25346468 25346633 -174283517 + MER5A DNA MER1_type 3 183 -6 1966 158 135 5 chr5 25347289 25347668 -174282482 - MSTA LTR MaLR 0 428 1 301 330 30 46 chr5 25347916 25348113 -174282037 - L2 LINE L2 -1344 1970 1777 290 282 77 0 chr5 25348171 25348288 -174281862 + L1ME4a LINE L1 5994 6119 -2 696 270 15 20 chr5 25349025 25349225 -174280925 - MER3 DNA MER1_type 0 209 11 2019 182 26 44 chr5 25351491 25351919 -174278231 - MSTB LTR MaLR -2 424 5 305 329 102 27 chr5 25352576 25352947 -174277203 + L1MEc LINE L1 953 1351 -5212 238 299 76 25 chr5 25353024 25353181 -174276969 + L1MEc LINE L1 1265 1429 -4955 1171 236 134 52 chr5 25353183 25353644 -174276506 - MLT1D LTR MaLR -6 499 1 511 300 100 30 chr5 25353658 25354028 -174276122 + L1MEc LINE L1 1540 1935 -4447 290 292 67 11 chr5 25355215 25355393 -174274757 + L1MEc LINE L1 2584 2771 -3611 7462 36 1 0 chr5 25355467 25356519 -174273631 + L1PA4 LINE L1 5100 6152 -3 336 134 25 168 chr5 25356532 25356651 -174273499 + L1ME LINE L1 5620 5721 -449 24 32 0 0 chr5 25356808 25356839 -174273311 + AT_rich Low_complexity Low_complexity 1 31 0 409 283 22 36 chr5 25356862 25357085 -174273065 + L1MEc LINE L1 2861 3080 -3302 289 135 58 0 chr5 25357088 25357140 -174273010 - MLT2A2 LTR ERVL 0 444 390 259 98 106 0 chr5 25357146 25357278 -174272872 + (TA)n Simple_repeat Simple_repeat 1 146 0 225 186 0 0 chr5 25357357 25357427 -174272723 + (TA)n Simple_repeat Simple_repeat 2 71 0 2786 117 25 0 chr5 25357435 25357838 -174272312 - MLT2A2 LTR ERVL -40 413 1 35000 108 10 8 chr5 25357838 25363547 -174266603 - ERVL-A2-A2 LTR ERVL 0 5654 2 2960 120 20 2 chr5 25363550 25363993 -174266157 - MLT2A2 LTR ERVL -2 451 1 598 263 74 29 chr5 25364214 25364457 -174265693 + L1MCa LINE L1 1327 1580 -4846 21 0 0 0 chr5 25364899 25364920 -174265230 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 25365924 25365946 -174264204 + AT_rich Low_complexity Low_complexity 1 22 0 405 300 72 22 chr5 25366262 25366485 -174263665 - L1M4 LINE L1 -790 5356 5123 270 334 30 25 chr5 25366571 25366936 -174263214 - L1M4 LINE L1 -1159 4987 4621 659 311 53 6 chr5 25367463 25367673 -174262477 - L1ME3 LINE L1 -120 6042 5810 258 32 0 0 chr5 25367673 25367704 -174262446 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 659 311 53 6 chr5 25367704 25367815 -174262335 - L1ME3 LINE L1 -352 5810 5706 21 0 0 0 chr5 25367973 25367994 -174262156 + AT_rich Low_complexity Low_complexity 1 21 0 2172 159 19 5 chr5 25368486 25368856 -174261294 + THE1C LTR MaLR 1 375 0 9367 142 40 7 chr5 25368857 25370386 -174259764 + THE1C-int LTR MaLR 2 1580 0 2315 148 14 5 chr5 25370387 25370758 -174259392 + THE1C LTR MaLR 2 375 0 423 274 28 65 chr5 25370923 25371171 -174258979 - L1ME1 LINE L1 -15 6220 5982 1068 271 96 11 chr5 25371227 25371874 -174258276 - L1ME1 LINE L1 -356 5879 5176 * 1555 280 51 17 chr5 25371846 25373021 -174257129 - L1ME1 LINE L1 -2980 3235 2058 1831 164 0 0 chr5 25373031 25373306 -174256844 + AluSx SINE Alu 1 275 -37 5684 163 60 12 chr5 25373635 25374741 -174255409 + Tigger3b DNA MER2_type 1 1159 -72 6536 214 135 14 chr5 25374744 25376308 -174253842 - MER52A LTR ERV1 0 1755 3 391 253 25 0 chr5 25376308 25376383 -174253767 + Tigger3b DNA MER2_type 1165 1241 0 542 308 75 48 chr5 25376466 25376904 -174253246 - L1ME3 LINE L1 -455 5707 5258 907 170 64 148 chr5 25377008 25377338 -174252812 + AluJb SINE Alu 1 302 0 2062 130 36 0 chr5 25378401 25378702 -174251448 - AluSx SINE Alu 0 312 1 42 73 0 24 chr5 25378946 25379070 -174251080 + AT_rich Low_complexity Low_complexity 1 121 0 226 315 136 19 chr5 25381339 25381552 -174248598 - LTR33 LTR ERVL 0 521 284 364 359 57 26 chr5 25382173 25382630 -174247520 - ERVL LTR ERVL -570 5194 4724 268 279 33 49 chr5 25382732 25382854 -174247296 - ERVL LTR ERVL -928 4557 4438 702 331 18 6 chr5 25382917 25383248 -174246902 - ERVL LTR ERVL -1190 4296 3953 186 143 0 0 chr5 25383756 25383791 -174246359 + (TA)n Simple_repeat Simple_repeat 2 36 0 2675 302 46 48 chr5 25383806 25383880 -174246270 - ERVL LTR ERVL -2303 3461 3388 1786 216 58 58 chr5 25383880 25384132 -174246018 - MLT1D LTR MaLR -1 504 253 186 43 0 0 chr5 25384132 25384155 -174245995 + (TC)n Simple_repeat Simple_repeat 2 24 0 2141 134 0 3 chr5 25384155 25384468 -174245682 - AluSq SINE Alu -1 312 1 1786 216 58 58 chr5 25384468 25384718 -174245432 - MLT1D LTR MaLR -250 255 1 2675 302 46 48 chr5 25384718 25384791 -174245359 - ERVL LTR ERVL -2376 3388 3316 5638 37 0 3 chr5 25384791 25385468 -174244682 + L1PA3 LINE L1 5478 6152 -3 2675 302 46 48 chr5 25385468 25386730 -174243420 - ERVL LTR ERVL -2448 3316 2054 358 267 9 9 chr5 25386855 25386960 -174243190 - ERVL LTR ERVL -3905 1859 1755 5212 41 2 2 chr5 25386981 25387613 -174242537 - L1PA5 LINE L1 -8 6146 5515 506 333 56 0 chr5 25387615 25387810 -174242340 + L1MC/D LINE L1 5459 5664 -2144 548 246 7 7 chr5 25388750 25388892 -174241258 + L1MA10 LINE L1 6179 6320 -14 1795 221 13 66 chr5 25388896 25389366 -174240784 + MER74C LTR ERVL 4 448 -12 1494 314 87 50 chr5 25389383 25390278 -174239872 + HERVL74 LTR ERVL 3 930 -4755 237 234 47 16 chr5 25390581 25390645 -174239505 + MIR SINE MIR 79 144 -64 405 322 110 49 chr5 25390876 25391305 -174238845 + L1 LINE L1 4884 5338 -808 421 287 51 72 chr5 25391326 25391563 -174238587 + HERVL74 LTR ERVL 674 905 -4780 3761 191 35 10 chr5 25391628 25393023 -174237127 + L1MA3 LINE L1 30 1389 -6335 414 0 0 0 chr5 25393023 25393069 -174237081 + (TAA)n Simple_repeat Simple_repeat 2 47 0 3761 191 35 10 chr5 25393069 25394154 -174235996 + L1MA3 LINE L1 1389 2446 -5278 2566 65 0 0 chr5 25394154 25394460 -174235690 + AluY SINE Alu 1 306 -5 3761 191 35 10 chr5 25394460 25395518 -174234632 + L1MA3 LINE L1 2446 3476 -4248 2107 138 0 0 chr5 25395518 25395816 -174234334 + AluSc SINE Alu 1 298 -11 3761 191 35 10 chr5 25395816 25396463 -174233687 + L1MA3 LINE L1 3476 4106 -3618 2224 114 0 3 chr5 25396463 25396761 -174233389 + AluSx SINE Alu 1 297 -15 3761 191 35 10 chr5 25396761 25397024 -174233126 + L1MA3 LINE L1 4106 4361 -3363 189 0 0 0 chr5 25397024 25397045 -174233105 + (TAA)n Simple_repeat Simple_repeat 2 22 0 3761 191 35 10 chr5 25397045 25399377 -174230773 + L1MA3 LINE L1 4361 7128 -596 1493 102 0 23 chr5 25399377 25399593 -174230557 + AluSq SINE Alu 98 308 -5 3761 191 35 10 chr5 25399593 25400206 -174229944 + L1MA3 LINE L1 7128 7724 0 186 300 20 0 chr5 25400223 25400273 -174229877 - L2 LINE L2 -84 3229 3179 285 135 0 0 chr5 25400745 25400797 -174229353 + (CA)n Simple_repeat Simple_repeat 2 53 0 1742 259 33 55 chr5 25400797 25401375 -174228775 + MLT1E2 LTR MaLR 37 601 -25 414 0 0 0 chr5 25401407 25401453 -174228697 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 21 0 0 0 chr5 25401532 25401553 -174228597 + AT_rich Low_complexity Low_complexity 1 21 0 235 257 73 92 chr5 25402363 25402581 -174227569 - L2 LINE L2 0 3313 3100 1943 142 11 0 chr5 25403179 25403461 -174226689 + AluSq SINE Alu 1 285 -28 2943 28 11 16 chr5 25403463 25403849 -174226301 + L1PA4 LINE L1 5794 6155 0 1918 143 52 25 chr5 25405576 25405941 -174224209 - THE1C LTR MaLR 0 375 1 29 0 0 0 chr5 25406747 25406776 -174223374 + AT_rich Low_complexity Low_complexity 1 29 0 1551 126 7 96 chr5 25406786 25407088 -174223062 - AluSx SINE Alu -37 275 1 45 19 0 0 chr5 25408710 25408762 -174221388 + AT_rich Low_complexity Low_complexity 1 52 0 35 41 0 0 chr5 25411122 25411171 -174218979 + AT_rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr5 25411589 25411617 -174218533 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr5 25412222 25412262 -174217888 + AT_rich Low_complexity Low_complexity 1 40 0 192 255 20 0 chr5 25413756 25413807 -174216343 + MIR SINE MIR 156 207 -55 268 196 11 63 chr5 25414021 25414210 -174215940 + (TA)n Simple_repeat Simple_repeat 2 180 0 24 0 0 0 chr5 25415297 25415321 -174214829 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr5 25416008 25416032 -174214118 + AT_rich Low_complexity Low_complexity 1 24 0 450 0 0 0 chr5 25416034 25416084 -174214066 + (TTC)n Simple_repeat Simple_repeat 2 51 0 7749 98 12 5 chr5 25416088 25418055 -174212095 - L1PA7 LINE L1 -8 6161 4145 1396 177 157 20 chr5 25418326 25418670 -174211480 - MSTB LTR MaLR -35 391 1 1309 226 82 15 chr5 25419472 25419812 -174210338 - MLT1A1 LTR MaLR -2 363 1 202 235 0 51 chr5 25421579 25421677 -174208473 + T-rich Low_complexity Low_complexity 5 97 0 817 189 17 63 chr5 25421837 25422012 -174208138 - FAM SINE Alu -8 167 1 782 252 50 90 chr5 25422043 25422444 -174207706 - MLT1B LTR MaLR -5 385 1 1711 173 133 13 chr5 25422515 25422897 -174207253 + MSTA LTR MaLR 1 428 0 2338 169 5 28 chr5 25423043 25423480 -174206670 + Tigger2a DNA MER2_type 1 427 -7 1595 219 76 3 chr5 25423656 25424025 -174206125 + MSTD LTR MaLR 1 396 0 304 314 160 24 chr5 25424196 25424572 -174205578 + L1 LINE L1 2890 3316 -2830 24 0 0 0 chr5 25424573 25424597 -174205553 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 25424624 25424646 -174205504 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 25425056 25425086 -174205064 + AT_rich Low_complexity Low_complexity 1 30 0 750 327 82 39 chr5 25425181 25426030 -174204120 + L1MEd LINE L1 682 1580 -4549 696 253 152 86 chr5 25427000 25427285 -174202865 + MLT2B1 LTR ERVL 1 333 -187 2459 63 0 0 chr5 25427285 25427587 -174202563 + AluY SINE Alu 1 302 -9 696 253 152 86 chr5 25427587 25427788 -174202362 + MLT2B1 LTR ERVL 333 519 -1 664 117 9 9 chr5 25427793 25427904 -174202246 + MLT-int LTR MaLR 5 115 -1620 * 1949 232 4 24 chr5 25427898 25428367 -174201783 + MSTD-int LTR MaLR 263 722 -649 294 281 22 0 chr5 25428509 25428598 -174201552 + MSTD-int LTR MaLR 676 766 -969 1753 241 21 17 chr5 25428685 25429105 -174201045 + MSTD-int LTR MaLR 1314 1735 0 1088 201 85 63 chr5 25429105 25429483 -174200667 + MLT1B LTR MaLR 1 386 -4 307 330 105 38 chr5 25429844 25430111 -174200039 + L3 LINE CR1 1129 1413 -164 771 198 86 26 chr5 25430113 25430229 -174199921 - L1MD3 LINE L1 -18 7977 7869 231 103 0 0 chr5 25430229 25430268 -174199882 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 771 198 86 26 chr5 25430268 25430383 -174199767 - L1MD3 LINE L1 -126 7869 7732 2068 107 21 0 chr5 25431678 25431969 -174198181 + AluSp SINE Alu 1 297 -16 2168 117 0 0 chr5 25432184 25432500 -174197650 - AluSx SINE Alu 0 316 1 22 35 0 0 chr5 25432624 25432653 -174197497 + AT_rich Low_complexity Low_complexity 1 29 0 305 121 0 69 chr5 25432727 25432785 -174197365 - MLT1E1 LTR MaLR -408 246 193 1033 248 72 30 chr5 25432842 25433186 -174196964 + MSTD LTR MaLR 19 428 0 262 240 0 0 chr5 25433247 25433297 -174196853 - MLT2F LTR ERVL -612 51 2 610 303 51 37 chr5 25434851 25435145 -174195005 - MER68 LTR ERV1 -4 558 261 42059 32 25 4 chr5 25435157 25441182 -174188968 + L1PA3 LINE L1 2 6154 -1 497 274 96 0 chr5 25441229 25441375 -174188775 - MER68 LTR ERV1 -348 214 55 565 240 0 0 chr5 25441727 25441829 -174188321 - MER58B DNA MER1_type 0 341 240 528 212 97 88 chr5 25441829 25442212 -174187938 - LTR35 LTR ERV1 0 556 196 22 0 0 0 chr5 25442349 25442371 -174187779 + AT_rich Low_complexity Low_complexity 1 22 0 2756 133 52 68 chr5 25442836 25443408 -174186742 + LTR1 LTR ERV1 32 594 -191 5850 132 182 84 chr5 25443418 25444959 -174185191 - pTR5 LTR ERV1 0 2438 747 1136 184 11 0 chr5 25444959 25445149 -174185001 + LTR1 LTR ERV1 594 785 0 186 212 0 0 chr5 25445153 25445186 -174184964 + MER5B DNA MER1_type 1 33 -145 3428 159 6 54 chr5 25445931 25446054 -174184096 + LTR35 LTR ERV1 1 128 -490 3487 137 73 2 chr5 25446054 25446645 -174183505 - MER41B LTR ERV1 0 635 3 3428 159 6 54 chr5 25446645 25447170 -174182980 + LTR35 LTR ERV1 128 618 0 350 284 78 50 chr5 25447189 25447407 -174182743 + LTR35-int LTR ERV1 1067 1290 -6247 6306 179 6 62 chr5 25447766 25449086 -174181064 + LTR35-int LTR ERV1 863 2108 -3838 1121 150 8 69 chr5 25449136 25449396 -174180754 + LTR35-int LTR ERV1 2758 3001 -2945 2862 208 55 23 chr5 25449468 25450065 -174180085 - LTR58 LTR ERV1 -3 676 55 2198 181 15 0 chr5 25450065 25450462 -174179688 - MER57A LTR ERV1 0 403 1 2862 208 55 23 chr5 25450462 25450519 -174179631 - LTR58 LTR ERV1 -624 55 1 8261 194 58 71 chr5 25450519 25451871 -174178279 + LTR35-int LTR ERV1 3031 3297 -1639 2125 168 100 72 chr5 25451871 25452443 -174177707 + LTR4 LTR ERV1 1 588 0 8261 194 58 71 chr5 25452443 25453630 -174176520 + LTR35-int LTR ERV1 3297 4499 -437 334 145 0 16 chr5 25453710 25453772 -174176378 + LTR35-int LTR ERV1 5994 6054 -277 1908 157 7 0 chr5 25454114 25454436 -174175714 + AluSx SINE Alu 1 324 0 3044 171 8 64 chr5 25454462 25455117 -174175033 + LTR35 LTR ERV1 1 618 0 299 330 0 9 chr5 25455678 25455755 -174174395 + GA-rich Low_complexity Low_complexity 3 80 -27 2045 130 7 0 chr5 25455755 25456048 -174174102 + AluSc SINE Alu 1 295 -14 299 330 0 9 chr5 25456048 25456076 -174174074 + GA-rich Low_complexity Low_complexity 80 107 0 2276 96 3 0 chr5 25456107 25456410 -174173740 + AluY SINE Alu 1 304 -7 259 17 17 83 chr5 25456413 25456473 -174173677 + (TTA)n Simple_repeat Simple_repeat 3 58 0 282 295 50 43 chr5 25456719 25456858 -174173292 + MIR SINE MIR 73 212 -50 1340 239 18 34 chr5 25457805 25458185 -174171965 + MLT1A2 LTR MaLR 1 374 0 679 200 18 5 chr5 25459609 25459768 -174170382 - L1MA8 LINE L1 -2 6298 6131 21 36 0 0 chr5 25459808 25459836 -174170314 + AT_rich Low_complexity Low_complexity 1 28 0 514 135 10 19 chr5 25459836 25459940 -174170210 - L1MA9 LINE L1 -19 6293 6191 226 209 0 0 chr5 25460245 25460288 -174169862 + CT-rich Low_complexity Low_complexity 2 44 0 4245 107 6 2 chr5 25461545 25462169 -174167981 + L1PA13 LINE L1 5537 6163 0 189 281 0 56 chr5 25462506 25462595 -174167555 + L2 LINE L2 3016 3099 -214 27 49 0 0 chr5 25464615 25464656 -174165494 + AT_rich Low_complexity Low_complexity 1 41 0 1862 157 0 20 chr5 25466075 25466375 -174163775 + AluSx SINE Alu 3 296 -16 23 0 0 0 chr5 25466437 25466460 -174163690 + AT_rich Low_complexity Low_complexity 1 23 0 2281 185 129 13 chr5 25467192 25467750 -174162400 + LTR28 LTR ERV1 1 1266 -444 452 277 43 28 chr5 25467754 25467895 -174162255 + LTR27 LTR ERV1 494 636 0 198 0 0 0 chr5 25467910 25467932 -174162218 + (GA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr5 25468229 25468250 -174161900 + AT_rich Low_complexity Low_complexity 1 21 0 332 299 40 62 chr5 25468266 25468490 -174161660 + L1M4 LINE L1 4029 4247 -1899 2007 166 6 11 chr5 25469043 25469399 -174160751 - L1P LINE L1 -1911 4235 3882 378 134 60 0 chr5 25469400 25469467 -174160683 + L1MA3 LINE L1 5893 5963 -342 25 31 0 0 chr5 25469688 25469720 -174160430 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 25470073 25470096 -174160054 + AT_rich Low_complexity Low_complexity 1 23 0 466 262 21 35 chr5 25472247 25472373 -174157777 + MLT1C LTR MaLR 62 187 -280 1798 155 7 10 chr5 25472373 25472683 -174157467 + AluSx SINE Alu 1 309 -3 466 262 21 35 chr5 25472683 25472701 -174157449 + MLT1C LTR MaLR 187 204 -263 21 0 0 0 chr5 25472723 25472744 -174157406 + AT_rich Low_complexity Low_complexity 1 21 0 6049 59 1 0 chr5 25472841 25473599 -174156551 - L1PA7 LINE L1 -4 6150 5392 616 175 54 19 chr5 25474842 25474999 -174155151 - L1MA8 LINE L1 -161 6130 5954 227 299 58 80 chr5 25475092 25475316 -174154834 - L1MEd LINE L1 -4906 1213 995 2140 122 7 0 chr5 25475799 25476102 -174154048 + AluY SINE Alu 1 305 -6 246 208 83 0 chr5 25476275 25476347 -174153803 - MLT1J LTR MaLR -30 481 404 289 298 111 0 chr5 25476822 25477030 -174153120 - L1MDa LINE L1 -4636 1904 1674 231 61 0 0 chr5 25477641 25477674 -174152476 + (A)n Simple_repeat Simple_repeat 1 33 0 22 56 0 0 chr5 25477748 25477784 -174152366 + AT_rich Low_complexity Low_complexity 1 36 0 303 259 62 89 chr5 25477842 25478066 -174152084 - L1ME4a LINE L1 -105 6016 5799 401 272 26 26 chr5 25478076 25478267 -174151883 + L1MD2 LINE L1 4836 5026 -1120 1314 216 34 3 chr5 25478338 25478779 -174151371 + AluJo SINE Alu 1 450 0 606 141 13 39 chr5 25478879 25479035 -174151115 + GA-rich Low_complexity Low_complexity 4 155 0 1433 258 58 7 chr5 25479064 25479609 -174150541 + L1MD2 LINE L1 5345 5737 -429 558 242 7 0 chr5 25479681 25479834 -174150316 + L1MA10 LINE L1 6177 6330 -4 22 56 0 0 chr5 25479836 25479872 -174150278 + AT_rich Low_complexity Low_complexity 1 36 0 269 208 129 34 chr5 25480200 25480378 -174149772 + L1ME3A LINE L1 2375 2569 -3577 1200 274 35 44 chr5 25480416 25480850 -174149300 - LTR40a LTR ERVL -89 430 1 512 257 58 18 chr5 25480953 25481179 -174148971 + L1ME3A LINE L1 2678 2912 -3234 329 300 112 52 chr5 25481184 25481611 -174148539 + L1ME3A LINE L1 2882 3334 -2812 447 324 125 0 chr5 25481857 25482153 -174147997 + L1ME3A LINE L1 4012 4344 -1802 31 76 0 0 chr5 25482166 25482232 -174147918 + AT_rich Low_complexity Low_complexity 1 66 0 5526 213 45 20 chr5 25482544 25483214 -174146936 + L1PA3 LINE L1 3638 4289 -1883 2282 80 10 16 chr5 25483214 25483525 -174146625 + AluY SINE Alu 1 309 -2 5526 213 45 20 chr5 25483525 25485260 -174144890 + L1PA3 LINE L1 4289 6172 0 865 325 50 37 chr5 25485274 25486028 -174144122 + L1ME3A LINE L1 5293 6056 -114 24 67 0 0 chr5 25486397 25486442 -174143708 + AT_rich Low_complexity Low_complexity 1 45 0 31 0 0 0 chr5 25487907 25487938 -174142212 + AT_rich Low_complexity Low_complexity 1 31 0 2037 109 7 0 chr5 25488076 25488388 -174141762 + AluSx SINE Alu 1 314 0 235 368 25 37 chr5 25489205 25489368 -174140782 - MIR3 SINE MIR -18 190 30 29 47 0 0 chr5 25490989 25491032 -174139118 + AT_rich Low_complexity Low_complexity 1 43 0 1817 134 31 0 chr5 25491194 25491484 -174138666 + AluSx SINE Alu 6 304 -8 181 284 40 27 chr5 25491488 25491562 -174138588 - L2 LINE L2 -349 2965 2891 1501 43 0 0 chr5 25491644 25491829 -174138321 - L1PA5 LINE L1 -4 6150 5966 565 324 180 32 chr5 25491999 25492728 -174137422 - L2 LINE L2 -695 2619 1783 23 0 0 0 chr5 25493184 25493207 -174136943 + AT_rich Low_complexity Low_complexity 1 23 0 388 329 90 8 chr5 25493361 25493595 -174136555 - L1ME4a LINE L1 -178 5943 5691 21 0 0 0 chr5 25493623 25493644 -174136506 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 25494092 25494123 -174136027 + AT_rich Low_complexity Low_complexity 1 31 0 2501 180 24 3 chr5 25494272 25494799 -174135351 - L1PA16 LINE L1 -2 6153 5600 2105 138 23 0 chr5 25494797 25495265 -174134885 + L1PA16 LINE L1 5124 5600 -566 * 25 0 0 0 chr5 25495315 25495340 -174134810 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 25495597 25495619 -174134531 + AT_rich Low_complexity Low_complexity 1 22 0 718 311 117 20 chr5 25495907 25496309 -174133841 + LTR16A1 LTR ERVL 17 457 0 301 235 81 101 chr5 25496398 25496547 -174133603 - LTR16A LTR ERVL 0 450 305 1550 206 41 39 chr5 25496663 25497052 -174133098 - MLT1B LTR MaLR 0 390 1 427 315 29 34 chr5 25497144 25497382 -174132768 + ERVL LTR ERVL 2104 2340 -3145 371 320 35 59 chr5 25498387 25498590 -174131560 + LTR16A1 LTR ERVL 1 198 -259 22 56 0 0 chr5 25499372 25499408 -174130742 + AT_rich Low_complexity Low_complexity 1 36 0 26 50 0 0 chr5 25499431 25499471 -174130679 + AT_rich Low_complexity Low_complexity 1 40 0 771 309 63 53 chr5 25500242 25500620 -174129530 + MLT2F LTR ERVL 117 498 -165 231 184 0 0 chr5 25500620 25500658 -174129492 - THE1C LTR MaLR 0 428 391 1778 170 13 19 chr5 25500660 25500977 -174129173 - THE1B LTR MaLR 0 364 50 832 145 0 0 chr5 25500977 25501108 -174129042 + THE1-int LTR MaLR 1039 1169 -411 * 7027 113 8 16 chr5 25501107 25502142 -174128008 - THE1B-int LTR MaLR -553 1027 1 1977 141 30 22 chr5 25502142 25502503 -174127647 - THE1B LTR MaLR 0 364 1 1815 158 46 12 chr5 25502503 25502831 -174127319 - THE1C LTR MaLR -36 339 1 739 228 6 25 chr5 25503261 25503423 -174126727 + FRAM SINE Alu 1 159 -17 2376 201 6 46 chr5 25503920 25504158 -174125992 - MLT1D LTR MaLR -3 502 256 2158 135 0 0 chr5 25504158 25504470 -174125680 - AluSx SINE Alu 0 312 1 2376 201 6 46 chr5 25504470 25504749 -174125401 - MLT1D LTR MaLR -249 256 6 435 328 57 33 chr5 25504760 25505004 -174125146 + ERVL LTR ERVL 880 1129 -4635 990 240 65 14 chr5 25505918 25506193 -174123957 + MER99 DNA DNA 6 294 -534 1332 251 56 10 chr5 25506219 25506630 -174123520 + MER99 DNA DNA 355 784 -44 11452 186 32 31 chr5 25508283 25511920 -174118230 + L1MA8 LINE L1 2657 6291 0 27 0 0 0 chr5 25512597 25512624 -174117526 + AT_rich Low_complexity Low_complexity 1 27 0 2640 108 8 0 chr5 25513425 25513846 -174116304 + L1PA15 LINE L1 5404 5832 -324 1049 144 17 0 chr5 25513860 25514034 -174116116 + L1PA15 LINE L1 5986 6162 -3 1442 188 76 0 chr5 25514088 25514402 -174115748 - MER44D DNA MER2_type -1 608 1 1452 193 119 59 chr5 25515201 25515605 -174114545 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 25515755 25515777 -174114373 + AT_rich Low_complexity Low_complexity 1 22 0 671 275 45 35 chr5 25517447 25517734 -174112416 - MER67C LTR ERV1 -420 290 1 3059 43 0 0 chr5 25519085 25519454 -174110696 + L1PA3 LINE L1 5787 6155 0 578 14 14 0 chr5 25519613 25519684 -174110466 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 1448 97 53 4 chr5 25519813 25520039 -174110111 + MLT2A1 LTR ERVL 1 237 -207 8196 79 1 8 chr5 25520172 25521249 -174108901 + HERVL-A1 LTR ERVL 1820 2888 -2766 * 10579 93 5 5 chr5 25521233 25522684 -174107466 + HERVL-A1 LTR ERVL 4204 5654 0 2772 100 24 40 chr5 25522684 25523135 -174107015 + MLT2A1 LTR ERVL 1 444 0 1359 194 42 31 chr5 25523866 25524018 -174106132 + L1MA8 LINE L1 5559 5708 -583 369 0 0 0 chr5 25524018 25524059 -174106091 + (TA)n Simple_repeat Simple_repeat 2 42 0 1359 194 42 31 chr5 25524059 25524261 -174105889 + L1MA8 LINE L1 5708 5917 -374 2058 175 52 99 chr5 25524418 25524533 -174105617 + L1MA9 LINE L1 5598 5717 -595 338 0 24 0 chr5 25524533 25524575 -174105575 + (TA)n Simple_repeat Simple_repeat 2 44 0 2058 175 52 99 chr5 25524575 25525209 -174104941 + L1MA9 LINE L1 5717 6312 0 3566 157 98 5 chr5 25526784 25527434 -174102716 - MER50 LTR ERV1 -23 711 1 4197 199 54 10 chr5 25527890 25529242 -174100908 - MER52A LTR ERV1 0 1755 281 285 253 63 0 chr5 25529755 25529850 -174100300 - MER52A LTR ERV1 -1654 101 1 326 338 25 13 chr5 25530402 25530559 -174099591 + L2 LINE L2 3155 3313 0 27 29 0 0 chr5 25530676 25530710 -174099440 + AT_rich Low_complexity Low_complexity 1 34 0 422 300 25 8 chr5 25532720 25532840 -174097310 - MIR SINE MIR -111 151 30 27 0 0 0 chr5 25533201 25533228 -174096922 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 25533684 25533712 -174096438 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 25534068 25534091 -174096059 + AT_rich Low_complexity Low_complexity 1 23 0 845 156 0 0 chr5 25534171 25534299 -174095851 + FLAM_C SINE Alu 2 129 -14 197 293 41 57 chr5 25534358 25534481 -174095669 - L2 LINE L2 -610 2704 2584 23 33 0 0 chr5 25534595 25534625 -174095525 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr5 25534742 25534779 -174095371 + AT_rich Low_complexity Low_complexity 1 37 0 422 138 0 0 chr5 25534960 25535040 -174095110 + L1MA3 LINE L1 6226 6305 0 1910 145 10 3 chr5 25535140 25535450 -174094700 + AluSx SINE Alu 1 312 0 213 178 0 0 chr5 25536482 25536527 -174093623 + (TA)n Simple_repeat Simple_repeat 1 45 0 473 310 66 15 chr5 25536669 25536866 -174093284 + MIR SINE MIR 40 246 -16 2954 156 27 7 chr5 25537279 25538301 -174091849 - Tigger4(Zombi) DNA MER2_type -2 2729 1638 263 188 0 0 chr5 25538298 25538346 -174091804 + Tigger4(Zombi) DNA MER2_type 1295 1342 -1389 * 7177 178 57 9 chr5 25538343 25539714 -174090436 - Tigger4(Zombi) DNA MER2_type -1283 1448 13 21 67 0 17 chr5 25540013 25540043 -174090107 + AT_rich Low_complexity Low_complexity 1 30 -29 5373 140 26 4 chr5 25540043 25541069 -174089081 - L1PA16 LINE L1 -2 6164 5128 21 67 0 17 chr5 25541069 25541098 -174089052 + AT_rich Low_complexity Low_complexity 30 59 0 265 286 22 11 chr5 25541510 25541601 -174088549 + MLT1J2 LTR MaLR 69 160 -290 33 0 0 0 chr5 25542006 25542039 -174088111 + AT_rich Low_complexity Low_complexity 1 33 0 2085 124 28 0 chr5 25543210 25543500 -174086650 + AluSq SINE Alu 1 298 -15 32 81 0 0 chr5 25543784 25543858 -174086292 + AT_rich Low_complexity Low_complexity 1 74 0 290 141 0 16 chr5 25544902 25544966 -174085184 + (TA)n Simple_repeat Simple_repeat 1 63 0 1962 150 0 0 chr5 25544966 25545253 -174084897 - AluSg SINE Alu -23 287 1 4248 240 73 38 chr5 25545301 25546281 -174083869 - L1MC1 LINE L1 0 6613 5668 2123 82 0 4 chr5 25546281 25546610 -174083540 - AluSc SINE Alu 0 329 2 4248 240 73 38 chr5 25546610 25547823 -174082327 - L1MC1 LINE L1 -945 5668 4341 3504 232 63 51 chr5 25547812 25550253 -174079897 - L1MC1 LINE L1 -2590 3836 1367 * 3821 194 30 86 chr5 25550238 25551283 -174078867 - L1MC1 LINE L1 -5366 1060 75 26 82 0 0 chr5 25552506 25552567 -174077583 + AT_rich Low_complexity Low_complexity 1 61 0 26 0 0 0 chr5 25552681 25552707 -174077443 + AT_rich Low_complexity Low_complexity 1 26 0 1778 160 38 0 chr5 25552758 25553046 -174077104 - AluSq SINE Alu -13 300 2 27 49 0 0 chr5 25553346 25553387 -174076763 + AT_rich Low_complexity Low_complexity 1 41 0 230 157 0 59 chr5 25554177 25554228 -174075922 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 225 402 8 17 chr5 25554620 25554737 -174075413 - L2 LINE L2 -4 3268 3153 21 71 0 0 chr5 25555242 25555284 -174074866 + AT_rich Low_complexity Low_complexity 1 42 0 381 329 53 12 chr5 25555418 25555661 -174074489 + MLT1J LTR MaLR 1 253 -258 281 264 96 60 chr5 25555715 25555882 -174074268 + MLT1J LTR MaLR 339 511 0 390 214 26 146 chr5 25555985 25556177 -174073973 - LTR16A1 LTR ERVL -5 452 284 21 0 0 0 chr5 25556589 25556610 -174073540 + AT_rich Low_complexity Low_complexity 1 21 0 553 100 0 0 chr5 25556639 25556719 -174073431 - MADE1 DNA Mariner 0 80 1 2390 195 76 52 chr5 25556761 25557595 -174072555 - L1MB3 LINE L1 -335 6084 5227 2239 110 0 0 chr5 25557595 25557904 -174072246 + AluSc SINE Alu 1 309 0 2390 195 76 52 chr5 25557904 25558063 -174072087 - L1MB3 LINE L1 -1192 5227 5073 6339 246 37 19 chr5 25558077 25558385 -174071765 - L1MB3 LINE L1 -1578 4804 4503 255 61 0 0 chr5 25558385 25558418 -174071732 + (TG)n Simple_repeat Simple_repeat 2 34 0 6339 246 37 19 chr5 25558418 25560209 -174069941 - L1MB3 LINE L1 -1879 4503 2667 980 9 0 0 chr5 25560209 25560322 -174069828 - AluYa5/8 SINE Alu 0 311 199 9708 197 55 36 chr5 25560407 25561957 -174068193 - L1MB3 LINE L1 -3940 2444 832 180 0 0 0 chr5 25561957 25561977 -174068173 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9708 197 55 36 chr5 25561977 25562808 -174067342 - L1MB3 LINE L1 -5552 832 18 21 36 0 0 chr5 25563732 25563760 -174066390 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 25564672 25564698 -174065452 + AT_rich Low_complexity Low_complexity 1 26 0 1311 169 59 17 chr5 25565134 25565371 -174064779 + Charlie3 DNA MER1_type 1 247 -2463 1278 122 19 24 chr5 25565358 25565563 -174064587 + Charlie3 DNA MER1_type 2503 2706 -4 * 32 43 0 0 chr5 25566655 25566701 -174063449 + AT_rich Low_complexity Low_complexity 1 46 0 53 90 0 0 chr5 25567231 25567375 -174062775 + AT_rich Low_complexity Low_complexity 1 144 0 897 189 18 84 chr5 25568176 25568462 -174061688 - L1MA9 LINE L1 -38 6274 6008 1115 232 140 29 chr5 25568464 25568813 -174061337 + L1MA9 LINE L1 5624 6011 -301 663 303 40 0 chr5 25569135 25569363 -174060787 - MIR SINE MIR -21 241 5 7013 95 12 7 chr5 25669440 25670465 -173959685 - L1P LINE L1 -798 5348 4319 26 0 0 0 chr5 25671355 25671381 -173958769 + AT_rich Low_complexity Low_complexity 1 26 0 418 242 51 47 chr5 25671409 25671624 -173958526 - L1MC5 LINE L1 -115 7846 7631 389 269 92 56 chr5 25671627 25671987 -173958163 - L1MC5 LINE L1 -476 7485 7113 395 82 98 0 chr5 25671993 25672054 -173958096 - MLT2A2 LTR ERVL 0 453 387 1981 148 39 27 chr5 25672185 25672704 -173957446 - MLT2A2 LTR ERVL -32 506 1 326 319 21 7 chr5 25672733 25672877 -173957273 - L1MC4 LINE L1 -1018 7024 6879 286 214 22 22 chr5 25672890 25672979 -173957171 + MER94 DNA DNA 25 113 -21 216 0 0 0 chr5 25673050 25673074 -173957076 + (TTA)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr5 25673191 25673215 -173956935 + AT_rich Low_complexity Low_complexity 1 24 0 2539 55 0 0 chr5 25673848 25674156 -173955994 - AluY SINE Alu -3 308 1 839 202 0 21 chr5 25675356 25675544 -173954606 - L1M4c LINE L1 -3640 2742 2559 1929 119 16 3 chr5 25675544 25675855 -173954295 + L1MA1 LINE L1 5987 6302 0 39 0 0 0 chr5 25675978 25676017 -173954133 + AT_rich Low_complexity Low_complexity 1 39 0 407 243 90 0 chr5 25676427 25676538 -173953612 + MER3 DNA MER1_type 1 121 -88 322 278 142 87 chr5 25676624 25677005 -173953145 + L1ME LINE L1 5258 5659 -462 2017 119 0 57 chr5 25677154 25677472 -173952678 + AluSq SINE Alu 2 301 -12 515 343 103 44 chr5 25677790 25678178 -173951972 + L2 LINE L2 88 498 -2816 31 26 0 0 chr5 25678252 25678290 -173951860 + AT_rich Low_complexity Low_complexity 1 38 0 218 125 21 0 chr5 25678459 25678507 -173951643 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 1326 277 69 35 chr5 25678786 25679023 -173951127 - L1M4c LINE L1 -4607 1777 1549 2426 87 0 0 chr5 25679023 25679333 -173950817 - AluY SINE Alu -1 310 1 1326 277 69 35 chr5 25679333 25679778 -173950372 - L1M4c LINE L1 -4835 1549 1072 553 299 48 30 chr5 25680343 25680778 -173949372 - L1MEc LINE L1 -4832 1710 1268 279 250 39 23 chr5 25681234 25681362 -173948788 - L1MEc LINE L1 -6212 613 484 22 0 0 0 chr5 25682365 25682387 -173947763 + AT_rich Low_complexity Low_complexity 1 22 0 183 80 0 0 chr5 25683040 25683065 -173947085 + (GA)n Simple_repeat Simple_repeat 2 26 0 2201 98 0 3 chr5 25683312 25683624 -173946526 + AluSq SINE Alu 1 311 0 877 296 4 15 chr5 25683689 25683953 -173946197 + L1MDa LINE L1 19 279 -6261 826 176 47 0 chr5 25684575 25684745 -173945405 + L1MA7 LINE L1 5984 6161 -130 435 139 0 0 chr5 25684849 25684928 -173945222 + L1MA7 LINE L1 6207 6285 -6 686 204 120 22 chr5 25684939 25685164 -173944986 + L1MDa LINE L1 970 1216 -5327 2008 116 0 14 chr5 25685164 25685448 -173944702 + AluSx SINE Alu 2 281 -31 7104 52 0 0 chr5 25685843 25686913 -173943237 - L1PA5 LINE L1 0 6154 5082 26 50 0 0 chr5 25687261 25687301 -173942849 + AT_rich Low_complexity Low_complexity 1 40 0 191 36 36 0 chr5 25688084 25688112 -173942038 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 37 39 0 0 chr5 25688993 25689044 -173941106 + AT_rich Low_complexity Low_complexity 1 51 0 25 0 0 0 chr5 25689134 25689159 -173940991 + AT_rich Low_complexity Low_complexity 1 25 0 351 0 0 0 chr5 25690665 25690704 -173939446 + (TTA)n Simple_repeat Simple_repeat 1 39 0 1235 184 24 14 chr5 25690901 25691189 -173938961 + L1MA4 LINE L1 6005 6295 -5 21 36 0 0 chr5 25692421 25692449 -173937701 + AT_rich Low_complexity Low_complexity 1 28 0 331 85 51 0 chr5 25693625 25693684 -173936466 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 2472 66 3 0 chr5 25694556 25694860 -173935290 + AluY SINE Alu 1 305 -6 370 262 78 43 chr5 25695214 25695355 -173934795 + MLT1L LTR MaLR 362 507 -108 2351 73 7 0 chr5 25696276 25696579 -173933571 - AluY SINE Alu -6 305 1 308 237 65 43 chr5 25697023 25697116 -173933034 + MLT1A2 LTR MaLR 5 99 -275 181 283 19 0 chr5 25697511 25697564 -173932586 - L2 LINE L2 -894 2420 2367 6492 76 8 5 chr5 25697608 25698478 -173931672 - L1PA7 LINE L1 -4 6150 5278 264 346 78 28 chr5 25698493 25698851 -173931299 - L2 LINE L2 -995 2319 1944 2305 220 62 37 chr5 25699876 25700471 -173929679 - MER90 LTR ERV1 -1 613 4 258 338 107 11 chr5 25700760 25701041 -173929109 + L1ME3A LINE L1 4625 4932 -1214 275 238 0 12 chr5 25701054 25701138 -173929012 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 850 271 18 7 chr5 25701186 25701459 -173928691 + L1ME3A LINE L1 5523 5798 -372 1079 263 128 37 chr5 25701496 25701957 -173928193 + MLT1F1 LTR MaLR 63 565 -2 536 297 100 34 chr5 25701979 25702299 -173927851 + L1ME3A LINE L1 5812 6152 -18 312 299 51 40 chr5 25702415 25702592 -173927558 - L1MDa LINE L1 -3894 2646 2468 28 48 0 0 chr5 25702785 25702827 -173927323 + AT_rich Low_complexity Low_complexity 1 42 0 423 0 0 0 chr5 25703810 25703857 -173926293 + (TA)n Simple_repeat Simple_repeat 2 48 0 2085 113 17 0 chr5 25703953 25704244 -173925906 + AluSx SINE Alu 1 296 -16 254 171 14 0 chr5 25704252 25704322 -173925828 + (TG)n Simple_repeat Simple_repeat 2 72 0 892 224 6 0 chr5 25704515 25704758 -173925392 + FAM SINE Alu 1 108 0 275 310 260 5 chr5 25705237 25705437 -173924713 - MIR SINE MIR -11 251 1 23 0 0 0 chr5 25705880 25705903 -173924247 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 25705972 25705994 -173924156 + AT_rich Low_complexity Low_complexity 1 22 0 888 90 0 0 chr5 25706031 25706153 -173923997 - L1PA7 LINE L1 -1 6153 6032 3500 128 26 29 chr5 25706253 25706902 -173923248 - L1P LINE L1 -2153 3993 3347 2673 51 27 0 chr5 25706902 25707237 -173922913 - LTR14A LTR ERVK 0 344 1 757 71 18 35 chr5 25707240 25707353 -173922797 - HERVK14 LTR ERVK 0 5945 5835 363 172 0 18 chr5 25707354 25707428 -173922722 - MER41C LTR ERV1 -493 61 1 5621 66 83 8 chr5 25707428 25708200 -173921950 - HERVK14 LTR ERVK -186 5759 4930 * 22386 71 3 6 chr5 25708190 25709150 -173921000 - HERVK14 LTR ERVK -3083 2862 1900 5175 88 91 21 chr5 25709150 25709922 -173920228 + LTR12 LTR ERV1 1 826 0 22386 71 3 6 chr5 25709922 25711833 -173918317 - HERVK14 LTR ERVK -4045 1900 1 2541 85 12 0 chr5 25711833 25712173 -173917977 - LTR14A LTR ERVK 0 344 1 5305 100 6 2 chr5 25712175 25712975 -173917175 - L1P LINE L1 -2794 3352 2550 692 278 0 48 chr5 25712983 25713256 -173916894 + pTR5 LTR ERV1 769 1028 -1410 4233 118 82 69 chr5 25713442 25714256 -173915894 + LTR12 LTR ERV1 1 825 -1 845 81 81 0 chr5 25714257 25714380 -173915770 + LTR12 LTR ERV1 582 714 0 12102 128 16 54 chr5 25714380 25717253 -173912897 - L1P3 LINE L1 -3586 2875 8 180 0 0 0 chr5 25717556 25717576 -173912574 + (A)n Simple_repeat Simple_repeat 1 20 0 26 0 0 0 chr5 25718238 25718264 -173911886 + AT_rich Low_complexity Low_complexity 1 26 0 976 303 3 18 chr5 25718663 25718990 -173911160 - ERVL LTR ERVL -636 5128 4807 22 0 0 0 chr5 25720970 25720992 -173909158 + AT_rich Low_complexity Low_complexity 1 22 0 335 362 51 7 chr5 25722271 25722409 -173907741 + MIR3 SINE MIR 44 187 -21 2366 144 3 0 chr5 25722534 25722895 -173907255 + THE1B LTR MaLR 1 362 -2 541 175 42 0 chr5 25723055 25723175 -173906975 + MLT1D LTR MaLR 379 503 -2 266 350 124 0 chr5 25723434 25723571 -173906579 + L2 LINE L2 1432 1585 -1729 854 345 123 14 chr5 25723592 25724186 -173905964 - L2 LINE L2 -773 2541 1883 592 346 59 30 chr5 25724264 25724866 -173905284 + L2 LINE L2 2615 3313 0 826 214 50 5 chr5 25725130 25725331 -173904819 - AluJo SINE Alu -4 308 99 653 135 0 0 chr5 25725455 25725551 -173904599 - AluJo SINE Alu -212 100 5 775 341 54 60 chr5 25725839 25726995 -173903155 + L2 LINE L2 2152 3309 -4 23 0 0 0 chr5 25727242 25727265 -173902885 + AT_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr5 25729673 25729697 -173900453 + (TATG)n Simple_repeat Simple_repeat 3 26 0 29 0 0 0 chr5 25729761 25729790 -173900360 + AT_rich Low_complexity Low_complexity 1 29 0 1830 177 124 111 chr5 25729872 25730029 -173900121 + MLT2D LTR ERVL 1 154 -310 2130 139 128 8 chr5 25730029 25730411 -173899739 - MSTA LTR MaLR 0 428 1 1830 177 124 111 chr5 25730411 25730636 -173899514 + MLT2D LTR ERVL 154 392 -72 312 27 0 0 chr5 25730636 25730673 -173899477 + (TG)n Simple_repeat Simple_repeat 2 38 0 1830 177 124 111 chr5 25730673 25730747 -173899403 + MLT2D LTR ERVL 392 464 0 451 262 60 13 chr5 25732368 25732517 -173897633 - MLT2E LTR ERVL -441 187 32 542 304 13 27 chr5 25733210 25733434 -173896716 - ERVL LTR ERVL -673 5091 4871 1089 233 164 31 chr5 25734320 25734766 -173895384 + MLT1D LTR MaLR 1 505 0 365 170 80 62 chr5 25734903 25735015 -173895135 - MER51D LTR ERV1 -44 613 500 284 246 15 0 chr5 25736058 25736123 -173894027 + tRNA-Phe-TTC tRNA tRNA 4 69 -7 28 29 0 0 chr5 25736849 25736884 -173893266 + AT_rich Low_complexity Low_complexity 1 35 0 29 28 0 0 chr5 25737537 25737573 -173892577 + AT_rich Low_complexity Low_complexity 1 36 0 379 240 0 0 chr5 25737867 25737942 -173892208 + Charlie1 DNA MER1_type 1517 1591 -1170 2163 110 0 17 chr5 25737943 25738243 -173891907 + AluSx SINE Alu 1 295 -17 220 205 0 0 chr5 25738244 25738283 -173891867 + (CATA)n Simple_repeat Simple_repeat 2 40 0 564 291 114 24 chr5 25738622 25739123 -173891027 - HAL1 LINE L1 -102 2405 1860 435 326 33 37 chr5 25739279 25739521 -173890629 - HAL1 LINE L1 -877 1630 1390 1267 97 102 0 chr5 25739567 25739763 -173890387 - L1PA10 LINE L1 -5 6163 5948 2070 131 3 0 chr5 25739919 25740217 -173889933 + AluY SINE Alu 1 299 -12 500 281 96 65 chr5 25740255 25740850 -173889300 - HAL1 LINE L1 -1156 1351 739 26 0 0 0 chr5 25741340 25741366 -173888784 + AT_rich Low_complexity Low_complexity 1 26 0 262 203 0 34 chr5 25741537 25741596 -173888554 - Tigger5 DNA MER2_type -4 2319 2263 565 244 67 12 chr5 25741607 25741771 -173888379 + MER58B DNA MER1_type 167 339 -2 2274 98 0 0 chr5 25741848 25742144 -173888006 + AluSq SINE Alu 1 296 -17 1143 188 0 27 chr5 25742471 25742694 -173887456 + AluJo SINE Alu 85 301 -11 1404 215 24 53 chr5 25743303 25743679 -173886471 - MLT1A1 LTR MaLR 0 365 1 2042 190 81 0 chr5 25743679 25744073 -173886077 - MLT1A1-int LTR MaLR 0 1735 1310 312 325 57 0 chr5 25744139 25744262 -173885888 - MLT1A1-int LTR MaLR -421 1314 1185 547 316 95 7 chr5 25746636 25747327 -173882823 - L1ME LINE L1 -441 5721 4969 2446 68 0 0 chr5 25747766 25748077 -173882073 - AluY SINE Alu 0 311 1 214 403 25 8 chr5 25748227 25748346 -173881804 - MIR SINE MIR -72 136 16 1204 196 69 16 chr5 25748603 25748909 -173881241 - L1MD3 LINE L1 -15 7980 7659 692 191 115 27 chr5 25749013 25749196 -173880954 - LTR1B LTR ERV1 -259 567 369 456 302 28 35 chr5 25749336 25749591 -173880559 + MER34B LTR ERV1 313 565 0 1009 239 12 12 chr5 25749591 25749685 -173880465 - L1MD3 LINE L1 -330 7665 7572 2034 211 135 40 chr5 25749685 25750439 -173879711 - LTR1B LTR ERV1 0 826 1 1009 239 12 12 chr5 25750439 25750599 -173879551 - L1MD3 LINE L1 -422 7573 7411 549 205 57 0 chr5 25750601 25750723 -173879427 - MLT1F1 LTR MaLR -436 131 3 26 30 0 0 chr5 25751579 25751612 -173878538 + AT_rich Low_complexity Low_complexity 1 33 0 718 194 46 104 chr5 25752011 25752397 -173877753 + MER89 LTR ERV1 2 460 -99 417 233 75 101 chr5 25753358 25753676 -173876474 + MER46C DNA MER2_type 22 331 -7 21 36 0 0 chr5 25753715 25753743 -173876407 + AT_rich Low_complexity Low_complexity 1 28 0 986 160 6 33 chr5 25753749 25753930 -173876220 + AluJb SINE Alu 136 311 -1 240 122 54 54 chr5 25754446 25754520 -173875630 + (CTATA)n Simple_repeat Simple_repeat 2 75 0 429 168 66 5 chr5 25754524 25754629 -173875521 + L1MB1 LINE L1 6066 6179 -10 1985 154 73 14 chr5 25754696 25755040 -173875110 + THE1B LTR MaLR 1 364 0 4443 194 15 66 chr5 25755078 25756163 -173873987 - L1MA8 LINE L1 -10 6281 5356 1798 206 9 0 chr5 25756163 25756508 -173873642 + MER7A DNA MER2_type 1 346 0 4443 194 15 66 chr5 25756508 25757461 -173872689 - L1MA8 LINE L1 -935 5356 4356 2187 55 7 4 chr5 25757474 25757749 -173872401 - AluY SINE Alu -2 309 34 352 206 9 9 chr5 25757975 25758082 -173872068 + CT-rich Low_complexity Low_complexity 2 108 0 23 54 0 0 chr5 25758561 25758598 -173871552 + AT_rich Low_complexity Low_complexity 1 37 0 182 285 125 75 chr5 25758929 25759129 -173871021 + MIR SINE MIR 50 259 -3 4962 68 36 29 chr5 25759424 25760143 -173870007 + L1PA8 LINE L1 5434 6157 -15 2360 85 0 0 chr5 25760673 25760978 -173869172 + AluY SINE Alu 1 305 -6 531 202 9 26 chr5 25761991 25762105 -173868045 + LOR1a LTR ERV1 386 497 0 1110 256 10 35 chr5 25762139 25762405 -173867745 + AluJo SINE Alu 8 267 -44 2165 95 13 0 chr5 25762405 25762709 -173867441 - AluSp SINE Alu -5 308 1 1110 256 10 35 chr5 25762709 25762753 -173867397 + AluJo SINE Alu 267 311 0 896 326 69 49 chr5 25762835 25763433 -173866717 + L1PBb LINE L1 10 1188 -6397 330 345 34 57 chr5 25763568 25763745 -173866405 + L1PBb LINE L1 1398 1570 -6015 379 314 131 49 chr5 25764369 25764614 -173865536 + L1PBb LINE L1 1532 1796 -5789 373 305 46 23 chr5 25764808 25764982 -173865168 + L1PBb LINE L1 1752 1929 -5656 2466 159 25 82 chr5 25765127 25765688 -173864462 - L1MA9 LINE L1 -1 6311 5783 230 152 0 0 chr5 25765690 25765736 -173864414 + LTR66 LTR ERVL 394 439 -171 621 245 0 0 chr5 25765751 25765898 -173864252 - L1MA9 LINE L1 -519 5793 5647 881 241 150 88 chr5 25766451 25767010 -173863140 - LTR28 LTR ERV1 -426 594 1 209 341 23 0 chr5 25767199 25767287 -173862863 - MIR SINE MIR -119 143 54 247 194 48 16 chr5 25767531 25767593 -173862557 + L1ME LINE L1 5604 5667 -454 21 36 0 0 chr5 25767603 25767631 -173862519 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 25768108 25768138 -173862012 + AT_rich Low_complexity Low_complexity 1 30 0 244 234 78 0 chr5 25768211 25768288 -173861862 + L1ME LINE L1 5513 5595 -526 33 43 0 0 chr5 25769114 25769161 -173860989 + AT_rich Low_complexity Low_complexity 1 47 0 26 50 0 0 chr5 25769454 25769494 -173860656 + AT_rich Low_complexity Low_complexity 1 40 0 22 70 0 0 chr5 25770130 25770173 -173859977 + AT_rich Low_complexity Low_complexity 1 43 0 265 172 31 0 chr5 25770525 25770589 -173859561 - MER52A LTR ERV1 -861 894 829 6808 65 5 1 chr5 25770771 25771972 -173858178 + L1PA7 LINE L1 4936 6141 -13 815 159 22 7 chr5 25772034 25772172 -173857978 + L1PA16 LINE L1 6018 6157 -9 916 186 229 7 chr5 25775308 25775588 -173854562 + MER2 DNA MER2_type 1 342 -2 1965 137 3 13 chr5 25776650 25776963 -173853187 - AluSg SINE Alu 0 310 1 1284 119 0 6 chr5 25776963 25777140 -173853010 - AluSc SINE Alu -20 289 114 1954 9 0 9 chr5 25777625 25777854 -173852296 - L1P1 LINE L1 -567 5588 5362 * 15818 26 1 0 chr5 25777851 25779729 -173850421 + L1P1 LINE L1 3489 5367 -779 22 70 0 0 chr5 25780370 25780413 -173849737 + AT_rich Low_complexity Low_complexity 1 43 0 270 172 31 0 chr5 25780765 25780829 -173849321 - MER52A LTR ERV1 -861 894 829 6851 64 5 1 chr5 25781011 25782212 -173847938 + L1PA7 LINE L1 4936 6141 -13 815 159 22 7 chr5 25782274 25782412 -173847738 + L1PA16 LINE L1 6018 6157 -9 916 186 229 7 chr5 25785548 25785828 -173844322 + MER2 DNA MER2_type 1 342 -2 1965 137 3 13 chr5 25786890 25787203 -173842947 - AluSg SINE Alu 0 310 1 1284 119 0 6 chr5 25787203 25787380 -173842770 - AluSc SINE Alu -20 289 114 1775 165 3 25 chr5 25790075 25790390 -173839760 - AluJb SINE Alu -1 311 4 322 300 0 0 chr5 25790804 25790894 -173839256 + L1MC4 LINE L1 6613 6702 -1340 205 138 0 0 chr5 25790894 25790923 -173839227 + (CA)n Simple_repeat Simple_repeat 1 29 0 428 219 65 0 chr5 25791188 25791311 -173838839 - MER94 DNA DNA -3 131 1 35 54 0 0 chr5 25792339 25792395 -173837755 + AT_rich Low_complexity Low_complexity 1 56 0 276 139 0 0 chr5 25793435 25793478 -173836672 + LTR30 LTR ERV1 1 43 -679 1781 98 29 8 chr5 25793478 25793785 -173836365 + LTR12 LTR ERV1 57 2032 -406 382 211 11 0 chr5 25793786 25793876 -173836274 + LTR30 LTR ERV1 553 643 -79 706 137 0 0 chr5 25793876 25793978 -173836172 + LTR12 LTR ERV1 613 714 0 28038 104 12 26 chr5 25793991 25798190 -173831960 + HERV9 LTR ERV1 40 4182 -4217 2260 170 36 45 chr5 25798190 25798684 -173831466 - LTR2B LTR ERV1 0 490 1 5128 97 14 10 chr5 25798684 25799415 -173830735 - Harlequin LTR ERV1 0 6896 6163 * 25773 75 2 7 chr5 25799403 25802771 -173827379 - Harlequin LTR ERV1 -1727 5169 1818 4557 146 64 30 chr5 25802764 25804111 -173826039 - Harlequin LTR ERV1 -5487 1409 1 * 2349 143 81 66 chr5 25804111 25804594 -173825556 - LTR2B LTR ERV1 0 490 1 5221 119 6 20 chr5 25804594 25805407 -173824743 + HERV17 LTR ERV1 4179 4980 -3419 1841 146 64 98 chr5 25805374 25806294 -173823856 + HERV17 LTR ERV1 703 1740 -5156 * 5655 100 1 0 chr5 25806292 25807062 -173823088 + HERV17 LTR ERV1 7626 8396 -3 548 82 0 0 chr5 25807065 25807138 -173823012 + LTR12 LTR ERV1 209 281 -433 298 274 11 0 chr5 25807138 25807233 -173822917 + LTR30 LTR ERV1 548 643 -79 1691 116 0 0 chr5 25807233 25807466 -173822684 + LTR12 LTR ERV1 480 712 -2 1339 237 90 18 chr5 25808142 25808576 -173821574 - MLT1C LTR MaLR 0 467 3 994 234 25 12 chr5 25808578 25808822 -173821328 - MLT1C-int LTR MaLR 0 1371 1125 249 167 17 17 chr5 25809025 25809085 -173821065 - MLT1C-int LTR MaLR -484 887 828 * 1925 235 13 17 chr5 25809082 25809542 -173820608 - MLT1C-int LTR MaLR -667 704 247 23 0 0 0 chr5 25809600 25809623 -173820527 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr5 25810766 25810809 -173819341 + AT_rich Low_complexity Low_complexity 1 43 0 270 274 145 64 chr5 25813152 25813386 -173816764 - L3 LINE CR1 -187 1390 1138 244 321 12 0 chr5 25813733 25813817 -173816333 + (TA)n Simple_repeat Simple_repeat 2 86 0 25 0 0 0 chr5 25813871 25813896 -173816254 + AT_rich Low_complexity Low_complexity 1 25 0 220 255 32 32 chr5 25814791 25814885 -173815265 + (TATATG)n Simple_repeat Simple_repeat 5 98 0 29 28 0 0 chr5 25814970 25815006 -173815144 + AT_rich Low_complexity Low_complexity 1 36 0 1942 120 25 0 chr5 25815211 25815511 -173814639 + AluSx SINE Alu 1 307 0 25 51 0 0 chr5 25815575 25815614 -173814536 + AT_rich Low_complexity Low_complexity 1 39 0 325 248 124 55 chr5 25816224 25816442 -173813708 + L1M4 LINE L1 4354 4586 -1560 644 170 28 0 chr5 25816473 25816579 -173813571 - FLAM_C SINE Alu -32 111 3 22 0 0 0 chr5 25816840 25816862 -173813288 + AT_rich Low_complexity Low_complexity 1 22 0 283 315 14 7 chr5 25817108 25817251 -173812899 + L1M4 LINE L1 2686 2829 -3317 2409 57 14 14 chr5 25817563 25817860 -173812290 + AluY SINE Alu 1 297 -14 344 333 87 26 chr5 25818520 25818911 -173811239 + L1M4 LINE L1 4233 4647 -1499 320 319 65 18 chr5 25819572 25819808 -173810342 - L1ME LINE L1 -517 5653 5401 27 49 0 0 chr5 25820110 25820151 -173809999 + AT_rich Low_complexity Low_complexity 1 41 0 490 304 103 0 chr5 25820167 25820371 -173809779 - MIR SINE MIR -19 243 19 1803 188 18 18 chr5 25820556 25820945 -173809205 - L1MA6 LINE L1 0 7362 6974 6503 180 49 5 chr5 25820990 25821019 -173809131 - L1MA6 LINE L1 -694 6668 6642 2912 176 177 16 chr5 25821019 25821730 -173808420 - LTR1B LTR ERV1 0 826 1 6503 180 49 5 chr5 25821730 25822624 -173807526 - L1MA6 LINE L1 -720 6642 5641 222 37 0 0 chr5 25822624 25822651 -173807499 + (TG)n Simple_repeat Simple_repeat 2 28 0 6503 180 49 5 chr5 25822651 25823314 -173806836 - L1MA6 LINE L1 -1721 5641 5009 6105 256 61 28 chr5 25823321 25824069 -173806081 - L1MA6 LINE L1 -2309 4899 4177 2287 88 0 3 chr5 25824069 25824385 -173805765 - AluSc SINE Alu 0 315 1 6105 256 61 28 chr5 25824385 25825493 -173804657 - L1MA6 LINE L1 -3031 4177 3107 1287 225 10 50 chr5 25825493 25825650 -173804500 - AluJo SINE Alu -24 288 147 2067 92 0 66 chr5 25825650 25825967 -173804183 - AluY SINE Alu -15 296 1 1287 225 10 50 chr5 25825967 25826107 -173804043 - AluJo SINE Alu -165 147 3 6105 256 61 28 chr5 25826107 25828305 -173801845 - L1MA6 LINE L1 -4101 3107 168 22 0 0 0 chr5 25829023 25829045 -173801105 + AT_rich Low_complexity Low_complexity 1 22 0 36 62 0 0 chr5 25829374 25829438 -173800712 + AT_rich Low_complexity Low_complexity 1 64 0 34 0 0 0 chr5 25829789 25829823 -173800327 + AT_rich Low_complexity Low_complexity 1 34 0 22 70 0 0 chr5 25829879 25829922 -173800228 + AT_rich Low_complexity Low_complexity 1 43 0 26 0 0 0 chr5 25830029 25830055 -173800095 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr5 25830204 25830239 -173799911 + AT_rich Low_complexity Low_complexity 1 35 0 2119 119 3 0 chr5 25830585 25830895 -173799255 - AluSp SINE Alu -2 311 1 1406 72 0 6 chr5 25831026 25831207 -173798943 - AluSg/x SINE Alu -7 305 126 440 93 0 0 chr5 25831212 25831287 -173798863 + Alu SINE Alu 236 310 0 415 333 53 22 chr5 25831919 25832147 -173798003 + MIR SINE MIR 10 244 -18 271 246 0 0 chr5 25832710 25832767 -173797383 + MER4-int LTR ERV1 1113 1169 -5429 504 125 12 0 chr5 25833217 25833297 -173796853 + MER67D LTR ERV1 1 81 -433 1077 231 108 10 chr5 25833334 25833641 -173796509 + MER67C LTR ERV1 67 403 -307 329 282 73 0 chr5 25833644 25833754 -173796396 - LTR16B LTR ERVL -239 225 108 662 352 35 41 chr5 25833929 25834742 -173795408 - HERVL LTR ERVL -289 5365 4234 295 295 63 11 chr5 25834924 25835019 -173795131 - HERVL LTR ERVL -1161 4324 4225 2921 221 26 10 chr5 25835445 25836070 -173794080 - MER39 LTR ERV1 0 707 73 1198 267 124 32 chr5 25836241 25836773 -173793377 - L1ME3A LINE L1 -10 6160 5580 892 294 73 47 chr5 25836784 25837029 -173793121 - L1ME3A LINE L1 -2908 3238 3001 2194 105 26 76 chr5 25837029 25837410 -173792740 - THE1B LTR MaLR -2 362 1 892 294 73 47 chr5 25837410 25837487 -173792663 - L1ME3A LINE L1 -3145 3001 2928 2214 110 0 3 chr5 25837487 25837779 -173792371 - AluSc SINE Alu -18 291 1 892 294 73 47 chr5 25837779 25838272 -173791878 - L1ME3A LINE L1 -3218 2928 2400 2097 112 7 3 chr5 25839113 25839416 -173790734 - AluSp SINE Alu -9 304 1 1823 131 0 0 chr5 25840658 25840925 -173789225 + AluSx SINE Alu 46 312 0 22 0 0 0 chr5 25841059 25841081 -173789069 + AT_rich Low_complexity Low_complexity 1 22 0 2279 114 0 0 chr5 25841541 25841847 -173788303 + AluSq SINE Alu 1 306 -7 1317 252 24 24 chr5 25842199 25842572 -173787578 - LTR40a LTR ERVL -49 470 98 258 32 0 0 chr5 25844563 25844594 -173785556 + (TG)n Simple_repeat Simple_repeat 2 32 0 1552 194 69 3 chr5 25844595 25844914 -173785236 + MER2 DNA MER2_type 1 340 -4 309 322 123 17 chr5 25844957 25845193 -173784957 - L1MC4a LINE L1 -1941 5867 5607 306 271 16 70 chr5 25846299 25846428 -173783722 - MIR SINE MIR -41 221 100 25 65 0 0 chr5 25847156 25847202 -173782948 + AT_rich Low_complexity Low_complexity 1 46 0 2408 78 0 0 chr5 25847352 25847658 -173782492 - AluY SINE Alu -4 307 2 230 311 31 66 chr5 25848043 25848239 -173781911 + MIR SINE MIR 3 191 -71 180 179 0 0 chr5 25848702 25848741 -173781409 + CT-rich Low_complexity Low_complexity 2 40 0 2092 72 4 0 chr5 25848760 25849037 -173781113 - L1PA8 LINE L1 -20 6152 5875 2115 154 0 61 chr5 25849037 25849283 -173780867 - Tigger2 DNA MER2_type -2 2716 2502 2082 86 7 7 chr5 25849283 25849586 -173780564 + AluSc SINE Alu 1 303 0 2115 154 0 61 chr5 25849586 25849746 -173780404 - Tigger2 DNA MER2_type -216 2502 2334 245 128 21 0 chr5 25849781 25849828 -173780322 + (TG)n Simple_repeat Simple_repeat 2 49 0 1493 176 50 58 chr5 25849829 25850188 -173779962 - MLT2C1 LTR ERVL -41 356 1 21 0 0 0 chr5 25851581 25851602 -173778548 + AT_rich Low_complexity Low_complexity 1 21 0 2173 116 0 0 chr5 25851952 25852262 -173777888 - AluSx SINE Alu -2 310 1 190 283 0 0 chr5 25852497 25852543 -173777607 - L2 LINE L2 -1 3271 3226 28 29 0 0 chr5 25853792 25853827 -173776323 + AT_rich Low_complexity Low_complexity 1 35 0 188 317 72 113 chr5 25853856 25854006 -173776144 + L2 LINE L2 2405 2560 -754 1940 197 7 31 chr5 25854006 25854427 -173775723 - LTR57 LTR ERVL 0 411 1 188 317 72 113 chr5 25854427 25854639 -173775511 + L2 LINE L2 2560 2752 -562 1226 176 9 0 chr5 25855390 25855606 -173774544 - L1MC1 LINE L1 -5 6328 6111 217 118 39 0 chr5 25855613 25855664 -173774486 + (TA)n Simple_repeat Simple_repeat 2 54 0 956 124 0 0 chr5 25855664 25855793 -173774357 - AluSg/x SINE Alu -24 288 160 2170 94 4 0 chr5 25855793 25856069 -173774081 - AluSp SINE Alu -36 277 1 522 0 0 0 chr5 25856071 25856129 -173774021 + (TA)n Simple_repeat Simple_repeat 1 58 0 2826 170 45 11 chr5 25856136 25856670 -173773480 - L1MC1 LINE L1 -244 6089 5538 4602 95 30 95 chr5 25857239 25858073 -173772077 - LTR17 LTR ERV1 0 780 1 2862 9 0 0 chr5 25859061 25859377 -173770773 + AluYb8 SINE Alu 1 316 -2 268 374 9 9 chr5 25859573 25859680 -173770470 + MIR SINE MIR 8 114 -148 1284 261 123 66 chr5 25859741 25860206 -173769944 + L1ME2 LINE L1 3831 4268 -1878 1870 154 3 3 chr5 25860206 25860491 -173769659 + AluJb SINE Alu 2 286 -26 414 0 0 0 chr5 25860498 25860544 -173769606 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1284 261 123 66 chr5 25860544 25861306 -173768844 + L1ME2 LINE L1 4273 5136 -1010 1734 265 77 17 chr5 25861339 25861974 -173768176 + L1ME2 LINE L1 5377 6049 -115 5624 130 31 27 chr5 25861974 25862300 -173767850 - Tigger1 DNA MER2_type 0 2418 2095 1253 158 74 87 chr5 25862300 25862598 -173767552 - AluSq SINE Alu -16 297 4 5624 130 31 27 chr5 25862598 25863060 -173767090 - Tigger1 DNA MER2_type -323 2095 1623 1840 136 7 33 chr5 25863060 25863362 -173766788 - AluSc SINE Alu -15 294 1 5624 130 31 27 chr5 25863362 25863565 -173766585 - Tigger1 DNA MER2_type -795 1623 1422 451 129 14 0 chr5 25863583 25863653 -173766497 + Tigger1 DNA MER2_type 1107 1177 -1241 7456 156 34 39 chr5 25863720 25864018 -173766132 - Tigger1 DNA MER2_type -954 1464 1166 1292 215 0 39 chr5 25864018 25864325 -173765825 - AluJo SINE Alu -17 295 1 7456 156 34 39 chr5 25864325 25864888 -173765262 - Tigger1 DNA MER2_type -1252 1166 601 2126 54 0 11 chr5 25864888 25865165 -173764985 - L1PA5 LINE L1 -1 6153 5880 7456 156 34 39 chr5 25865165 25865747 -173764403 - Tigger1 DNA MER2_type -1817 601 28 293 313 15 0 chr5 25865928 25866062 -173764088 + (TA)n Simple_repeat Simple_repeat 2 137 0 241 345 17 17 chr5 25867495 25867614 -173762536 + L2 LINE L2 3192 3310 -3 206 238 38 62 chr5 25868018 25868098 -173762052 - MIR3 SINE MIR -40 168 91 1731 122 93 4 chr5 25868110 25868380 -173761770 - AluSx SINE Alu -18 294 1 22 80 0 0 chr5 25868468 25868518 -173761632 + AT_rich Low_complexity Low_complexity 1 50 0 2351 171 24 14 chr5 25869253 25869675 -173760475 - MSTB LTR MaLR 0 426 1 1175 224 79 65 chr5 25869834 25870326 -173759824 + MLT1D LTR MaLR 5 503 -2 2816 113 30 38 chr5 25870581 25871050 -173759100 + MER4C LTR ERV1 1 465 0 478 321 58 74 chr5 25871095 25871178 -173758972 + HAL1b LINE L1 42 125 -1223 2317 156 11 36 chr5 25871178 25871620 -173758530 + MER61C LTR ERV1 1 431 -3 478 321 58 74 chr5 25871620 25872056 -173758094 + HAL1b LINE L1 125 364 -984 3019 203 21 89 chr5 25872056 25873095 -173757055 + LTR5 LTR ERVK 1 968 -1 478 321 58 74 chr5 25873095 25873157 -173756993 + HAL1b LINE L1 364 425 -923 348 250 111 32 chr5 25874017 25874354 -173755796 + L1 LINE L1 2214 2573 -3573 302 271 28 14 chr5 25874586 25874730 -173755420 + (TATATG)n Simple_repeat Simple_repeat 5 150 0 23 33 0 0 chr5 25874770 25874800 -173755350 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr5 25874851 25874897 -173755253 + AT_rich Low_complexity Low_complexity 1 46 0 2231 116 3 0 chr5 25874916 25875226 -173754924 - AluSp SINE Alu 0 313 3 488 267 38 15 chr5 25876257 25876388 -173753762 + MIR SINE MIR 24 157 -105 2025 138 3 0 chr5 25877316 25877621 -173752529 + AluSx SINE Alu 1 306 -6 684 287 78 4 chr5 25878309 25878539 -173751611 + MIR SINE MIR 15 261 -1 320 244 35 29 chr5 25880427 25880599 -173749551 + (TA)n Simple_repeat Simple_repeat 2 174 0 1039 189 75 137 chr5 25880965 25881461 -173748689 - MER4C LTR ERV1 0 465 1 3859 186 28 18 chr5 25881503 25882325 -173747825 - MER4C-int LTR ERV1 -1023 5308 4479 2676 211 83 67 chr5 25882306 25883191 -173746959 - MER4C-int LTR ERV1 -2023 4763 3893 * 207 100 0 0 chr5 25883191 25883221 -173746929 + (CTTA)n Simple_repeat Simple_repeat 2 31 0 1764 181 0 0 chr5 25883221 25883502 -173746648 - AluSx SINE Alu -29 283 3 2676 211 83 67 chr5 25883502 25884442 -173745708 - MER4C-int LTR ERV1 -2892 3894 1603 1280 229 45 138 chr5 25884458 25885173 -173744977 - MER4C-int LTR ERV1 -4530 3007 2360 1307 198 104 45 chr5 25885292 25885666 -173744484 - MER4C-int LTR ERV1 -4942 1389 994 1928 140 0 10 chr5 25885891 25886183 -173743967 + AluSx SINE Alu 1 289 -23 219 23 93 0 chr5 25886190 25886233 -173743917 + (CAAA)n Simple_repeat Simple_repeat 4 50 0 549 121 43 26 chr5 25886396 25886512 -173743638 - MER4C-int LTR ERV1 -6346 252 135 1150 234 72 34 chr5 25886641 25886845 -173743305 - MER4C LTR ERV1 -4 461 266 2135 105 3 16 chr5 25886845 25887149 -173743001 - AluSx SINE Alu -10 302 3 1150 234 72 34 chr5 25887149 25887388 -173742762 - MER4C LTR ERV1 -199 266 1 2347 141 61 4 chr5 25887817 25888277 -173741873 - LTR19A LTR ERV1 0 486 1 725 324 161 43 chr5 25888430 25889320 -173740830 - L2 LINE L2 -1 3312 2320 241 269 21 0 chr5 25890672 25890765 -173739385 + (TA)n Simple_repeat Simple_repeat 1 95 0 1575 181 30 20 chr5 25891112 25891230 -173738920 + AluJb SINE Alu 7 122 -190 365 38 57 0 chr5 25891230 25891283 -173738867 + A-rich Low_complexity Low_complexity 5 60 0 1575 181 30 20 chr5 25891283 25891467 -173738683 + AluJb SINE Alu 122 312 0 199 366 0 14 chr5 25891569 25891640 -173738510 + L2 LINE L2 3239 3308 -5 34 24 0 0 chr5 25893511 25893552 -173736598 + AT_rich Low_complexity Low_complexity 1 41 0 289 351 37 21 chr5 25896319 25896507 -173733643 + MIR SINE MIR 58 248 -14 22 0 0 0 chr5 25896707 25896729 -173733421 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr5 25896817 25896842 -173733308 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr5 25898297 25898334 -173731816 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 25899015 25899036 -173731114 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 25899544 25899566 -173730584 + AT_rich Low_complexity Low_complexity 1 22 0 25 65 0 0 chr5 25900081 25900127 -173730023 + AT_rich Low_complexity Low_complexity 1 46 0 37 62 0 0 chr5 25901089 25901154 -173728996 + AT_rich Low_complexity Low_complexity 1 65 0 2024 101 9 32 chr5 25901958 25902274 -173727876 + AluSc SINE Alu 1 309 0 26 64 0 0 chr5 25902659 25902706 -173727444 + AT_rich Low_complexity Low_complexity 1 47 0 200 59 29 0 chr5 25905300 25905334 -173724816 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 372 178 0 0 chr5 25905341 25905414 -173724736 - LTR30 LTR ERV1 -98 624 552 2079 127 0 3 chr5 25905807 25906098 -173724052 + AluSx SINE Alu 7 296 -16 22 0 0 0 chr5 25906127 25906149 -173724001 + AT_rich Low_complexity Low_complexity 1 22 0 409 340 54 33 chr5 25906905 25907146 -173723004 + MIR SINE MIR 16 261 -1 2145 71 0 14 chr5 25908324 25908619 -173721531 - AluY SINE Alu -20 291 1 561 258 71 7 chr5 25909801 25909956 -173720194 + MER45A DNA AcHobo 1 165 -13 378 271 28 9 chr5 25910074 25910181 -173719969 + MIR SINE MIR 49 157 -105 321 252 56 19 chr5 25910256 25910363 -173719787 + MIR SINE MIR 114 224 -38 24 53 0 0 chr5 25910444 25910482 -173719668 + AT_rich Low_complexity Low_complexity 1 38 0 1755 205 92 66 chr5 25910493 25910910 -173719240 + MER34 LTR ERV1 26 460 -82 2615 42 3 0 chr5 25910910 25911220 -173718930 - AluY SINE Alu 0 311 1 1755 205 92 66 chr5 25911220 25911305 -173718845 + MER34 LTR ERV1 460 541 -1 2112 120 7 7 chr5 25912229 25912537 -173717613 + AluSg SINE Alu 1 308 -2 26 0 0 0 chr5 25913584 25913610 -173716540 + AT_rich Low_complexity Low_complexity 1 26 0 218 95 40 68 chr5 25913738 25913812 -173716338 + (TATAA)n Simple_repeat Simple_repeat 1 72 0 1542 168 6 84 chr5 25914154 25914488 -173715662 - MER1B DNA MER1_type 0 339 32 757 225 23 74 chr5 25914496 25914834 -173715316 - L1MC/D LINE L1 -743 5403 5220 2029 126 13 3 chr5 25914834 25915144 -173715006 - AluSq SINE Alu 0 313 1 757 225 23 74 chr5 25915144 25915279 -173714871 - L1MC/D LINE L1 -926 5220 5080 423 0 0 0 chr5 25915621 25915668 -173714482 + (TG)n Simple_repeat Simple_repeat 1 47 0 300 268 29 36 chr5 25915696 25915834 -173714316 - HAL1 LINE L1 -885 1622 1486 21 36 0 0 chr5 25916027 25916055 -173714095 + AT_rich Low_complexity Low_complexity 1 28 0 435 313 62 35 chr5 25916538 25916765 -173713385 - LTR40a LTR ERVL -42 477 245 21 0 0 0 chr5 25917566 25917587 -173712563 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 25917699 25917721 -173712429 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr5 25917873 25917913 -173712237 + AT_rich Low_complexity Low_complexity 1 40 0 27 81 0 0 chr5 25919625 25919687 -173710463 + AT_rich Low_complexity Low_complexity 1 62 0 24 67 0 0 chr5 25920309 25920354 -173709796 + AT_rich Low_complexity Low_complexity 1 45 0 459 0 0 0 chr5 25921348 25921399 -173708751 + (TG)n Simple_repeat Simple_repeat 2 52 0 193 289 55 55 chr5 25921695 25921823 -173708327 - MIR SINE MIR -46 216 89 444 314 78 25 chr5 25922072 25922276 -173707874 + MIR SINE MIR 48 262 0 24 0 0 0 chr5 25922497 25922521 -173707629 + AT_rich Low_complexity Low_complexity 1 24 0 208 357 0 0 chr5 25923579 25923657 -173706493 - MIR SINE MIR -76 132 54 331 323 21 27 chr5 25923765 25923951 -173706199 + L1ME2 LINE L1 4007 4191 -1955 960 297 94 41 chr5 25924025 25924616 -173705534 - L1MC4 LINE L1 -142 7900 7273 2080 54 12 75 chr5 25924616 25924948 -173705202 + AluY SINE Alu 1 311 0 960 297 94 41 chr5 25924948 25924985 -173705165 - L1MC4 LINE L1 -769 7273 7239 1081 250 105 10 chr5 25924992 25925376 -173704774 - L1MD3 LINE L1 -943 7071 6664 450 306 49 0 chr5 25925744 25925927 -173704223 - L1MC4 LINE L1 -1393 6649 6458 1250 254 73 45 chr5 25926307 25926700 -173703450 + L1ME2 LINE L1 4147 4527 -1637 1181 212 53 70 chr5 25926700 25926904 -173703246 + MLT1B LTR MaLR 1 196 -194 210 91 0 0 chr5 25926904 25926937 -173703213 + (CA)n Simple_repeat Simple_repeat 1 33 0 1181 212 53 70 chr5 25926937 25927129 -173703021 + MLT1B LTR MaLR 196 390 0 1250 254 73 45 chr5 25927129 25927187 -173702963 + L1ME2 LINE L1 4527 4582 -1582 2021 142 3 0 chr5 25927187 25927490 -173702660 - AluSx SINE Alu -8 304 1 1250 254 73 45 chr5 25927490 25928936 -173701214 + L1ME2 LINE L1 4582 6154 -10 2764 176 45 35 chr5 25929445 25929974 -173700176 + L1MB4 LINE L1 5300 5892 -288 2046 129 0 0 chr5 25929974 25930268 -173699882 + AluSg SINE Alu 3 296 -14 2764 176 45 35 chr5 25930268 25930558 -173699592 + L1MB4 LINE L1 5892 6178 -2 30 0 7 0 chr5 25930741 25930809 -173699341 + AT_rich Low_complexity Low_complexity 1 30 0 2078 97 7 10 chr5 25930909 25931208 -173698942 - AluSx SINE Alu -14 298 1 394 328 109 0 chr5 25931550 25931733 -173698417 + LTR16A LTR ERVL 196 398 -52 183 80 0 0 chr5 25931794 25931819 -173698331 + (TA)n Simple_repeat Simple_repeat 2 26 0 804 228 46 20 chr5 25932733 25932930 -173697220 + MER63A DNA MER1_type 7 208 -2 231 204 0 0 chr5 25933930 25933984 -173696166 + A-rich Low_complexity Low_complexity 1 54 0 2525 46 0 0 chr5 25934420 25934724 -173695426 + AluY SINE Alu 1 304 -7 287 206 46 15 chr5 25934767 25934898 -173695252 + (TA)n Simple_repeat Simple_repeat 2 136 0 2356 45 0 7 chr5 25934898 25935186 -173694964 - AluY SINE Alu -25 286 1 2067 217 67 22 chr5 25935186 25935720 -173694430 + Tigger6a DNA MER2_type 103 660 -423 376 265 80 10 chr5 25935753 25935953 -173694197 + L1MEc LINE L1 2070 2283 -4113 1887 127 34 0 chr5 25936092 25936383 -173693767 + AluSq SINE Alu 13 313 0 2925 234 93 25 chr5 25937340 25938309 -173691841 + L1MC3 LINE L1 6137 6344 0 350 310 66 40 chr5 25939633 25940237 -173689913 + L1MEc LINE L1 3612 4231 -1984 249 146 0 0 chr5 25940238 25940286 -173689864 + (TA)n Simple_repeat Simple_repeat 2 49 0 905 310 165 36 chr5 25940286 25941015 -173689135 + L2 LINE L2 1709 2531 -783 671 76 0 0 chr5 25941040 25941132 -173689018 - L1PA13 LINE L1 -4 6159 6068 316 375 11 11 chr5 25941169 25941353 -173688797 - L1M4 LINE L1 -2420 3726 3543 476 78 16 0 chr5 25941376 25941462 -173688688 - L1PA12 LINE L1 -41 6120 6031 783 285 46 54 chr5 25941462 25941559 -173688591 + L2 LINE L2 2703 2799 -514 1924 221 88 7 chr5 25941559 25942024 -173688126 - MLT1D LTR MaLR -2 503 1 783 285 46 54 chr5 25942024 25942513 -173687637 + L2 LINE L2 2799 3287 -26 226 236 70 16 chr5 25942878 25942980 -173687170 + L1ME LINE L1 5517 5603 -559 1512 208 20 10 chr5 25943999 25944292 -173685858 - AluJo SINE Alu -16 296 1 2385 75 3 3 chr5 25944707 25945012 -173685138 - AluSg SINE Alu -5 305 1 480 18 0 0 chr5 25947009 25947066 -173683084 + (GA)n Simple_repeat Simple_repeat 2 58 0 2262 113 0 14 chr5 25947275 25947628 -173682522 + L1PA13 LINE L1 5811 6158 -5 186 43 0 0 chr5 25947645 25947668 -173682482 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 460 206 98 10 chr5 25947670 25947772 -173682378 - FLAM_A SINE Alu -18 115 5 1911 141 23 3 chr5 25948487 25948792 -173681358 - AluSx SINE Alu -1 311 1 818 192 7 0 chr5 25948919 25949070 -173681080 + MLT1B LTR MaLR 239 390 0 328 299 45 8 chr5 25949245 25949379 -173680771 + L2 LINE L2 2935 3073 -240 26 50 0 0 chr5 25949540 25949580 -173680570 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 25950284 25950305 -173679845 + AT_rich Low_complexity Low_complexity 1 21 0 257 307 47 13 chr5 25950384 25950534 -173679616 + L1M4 LINE L1 2676 2830 -3316 23 33 0 0 chr5 25950562 25950592 -173679558 + AT_rich Low_complexity Low_complexity 1 30 0 2863 242 54 29 chr5 25951050 25951197 -173678953 - L1MC4a LINE L1 -148 7660 7518 2442 101 31 6 chr5 25951197 25951552 -173678598 + THE1B LTR MaLR 1 364 0 2863 242 54 29 chr5 25951552 25952330 -173677820 - L1MC4a LINE L1 -290 7518 6712 302 302 50 43 chr5 25952769 25953047 -173677103 + L1MC4 LINE L1 6759 7038 -1004 390 269 0 0 chr5 25953844 25953989 -173676161 + (TA)n Simple_repeat Simple_repeat 1 145 0 2087 144 0 0 chr5 25954358 25954664 -173675486 - AluSx SINE Alu -6 306 1 21 0 0 0 chr5 25954727 25954748 -173675402 + AT_rich Low_complexity Low_complexity 1 21 0 366 322 40 17 chr5 25954980 25955254 -173674896 + L1MC4a LINE L1 5297 5576 -586 987 226 160 34 chr5 25955255 25955636 -173674514 - MLT1C LTR MaLR -5 462 34 300 308 33 34 chr5 25955661 25955908 -173674242 + L1MC4a LINE L1 5707 5956 -208 1563 156 92 18 chr5 25956197 25956479 -173673671 - AluSx SINE Alu -9 303 1 1187 113 6 0 chr5 25956736 25956895 -173673255 + AluSp SINE Alu 1 160 -153 1364 92 63 24 chr5 25956898 25957104 -173673046 + AluSp SINE Alu 88 301 -12 2037 114 7 0 chr5 25957472 25957796 -173672354 + AluSg SINE Alu 1 326 0 394 318 98 18 chr5 25957829 25958106 -173672044 + HAL1 LINE L1 1487 1785 -722 297 0 0 0 chr5 25958107 25958140 -173672010 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 217 238 0 0 chr5 25958956 25958998 -173671152 + (CATA)n Simple_repeat Simple_repeat 2 43 0 23 33 0 0 chr5 25959010 25959040 -173671110 + AT_rich Low_complexity Low_complexity 1 30 0 371 264 14 0 chr5 25962750 25963042 -173667108 + (TA)n Simple_repeat Simple_repeat 1 296 0 1999 132 48 6 chr5 25963061 25963394 -173666756 - MER7A DNA MER2_type -1 345 1 186 103 0 0 chr5 25963469 25963498 -173666652 + (TG)n Simple_repeat Simple_repeat 2 30 0 288 237 0 0 chr5 25963612 25963671 -173666479 + L2 LINE L2 3214 3272 0 261 358 28 39 chr5 25964472 25964572 -173665578 + MIR SINE MIR 55 154 -108 391 75 194 0 chr5 25964572 25964639 -173665511 + MADE1 DNA Mariner 1 80 0 261 358 28 39 chr5 25964639 25964717 -173665433 + MIR SINE MIR 154 231 -31 189 74 0 0 chr5 25965628 25965655 -173664495 + (T)n Simple_repeat Simple_repeat 1 27 0 257 351 58 27 chr5 25966598 25966823 -173663327 + L2 LINE L2 2828 3059 -213 2629 97 6 0 chr5 25967038 25967400 -173662750 - THE1B LTR MaLR 0 364 1 590 242 95 57 chr5 25967485 25967696 -173662454 - MER20 DNA MER1_type 0 219 1 183 80 0 0 chr5 25967871 25967896 -173662254 + (TAA)n Simple_repeat Simple_repeat 2 26 0 228 345 86 36 chr5 25967908 25968128 -173662022 - MIR SINE MIR -5 257 27 505 186 99 88 chr5 25968131 25968394 -173661756 + MER33 DNA MER1_type 1 266 -58 241 295 9 36 chr5 25968394 25968506 -173661644 + MIR SINE MIR 104 212 -50 1391 138 5 5 chr5 25968738 25968990 -173661160 + AluSg/x SINE Alu 76 327 0 209 189 0 0 chr5 25970647 25970684 -173659466 + T-rich Low_complexity Low_complexity 4 40 0 567 264 50 0 chr5 25973844 25974003 -173656147 - MER115 DNA AcHobo -8 685 519 339 381 34 53 chr5 25974216 25974481 -173655669 - MER115 DNA AcHobo -366 327 68 29 0 0 0 chr5 25975020 25975049 -173655101 + AT_rich Low_complexity Low_complexity 1 29 0 1937 186 5 22 chr5 25977994 25978027 -173652123 - MLT1A1 LTR MaLR -1 364 332 1873 155 77 0 chr5 25978027 25978350 -173651800 + MER7A DNA MER2_type 1 346 0 1937 186 5 22 chr5 25978350 25978686 -173651464 - MLT1A1 LTR MaLR -33 332 1 2142 112 0 0 chr5 25979718 25980014 -173650136 + AluSc SINE Alu 1 296 -13 964 205 81 77 chr5 25981238 25981535 -173648615 + AluJo SINE Alu 1 298 -4 189 0 0 0 chr5 25981886 25981907 -173648243 + (TG)n Simple_repeat Simple_repeat 2 22 0 318 294 22 7 chr5 25982254 25982390 -173647760 + (TA)n Simple_repeat Simple_repeat 1 138 0 1750 197 16 94 chr5 25983675 25983827 -173646323 - MLT2C2 LTR ERVL -60 404 242 1948 131 27 3 chr5 25983827 25984125 -173646025 - AluSx SINE Alu -7 305 1 1750 197 16 94 chr5 25984125 25984408 -173645742 - MLT2C2 LTR ERVL -222 242 3 505 282 79 71 chr5 25984596 25985256 -173644894 + L1MEc LINE L1 901 1571 -4825 2298 100 0 0 chr5 25985256 25985555 -173644595 - AluSq SINE Alu -14 299 1 505 282 79 71 chr5 25985555 25985804 -173644346 + L1MEc LINE L1 1571 1817 -4579 279 256 39 0 chr5 25985920 25985998 -173644152 + L1ME3A LINE L1 6086 6166 -4 734 354 114 13 chr5 25986307 25986850 -173643300 + L2 LINE L2 2383 2977 -295 321 307 52 16 chr5 25986955 25987206 -173642944 - L1M4 LINE L1 -871 5275 5016 25 31 0 0 chr5 25987980 25988012 -173642138 + AT_rich Low_complexity Low_complexity 1 32 0 280 299 103 39 chr5 25988336 25988617 -173641533 - HAL1 LINE L1 -448 2059 1761 819 284 52 31 chr5 25988703 25989221 -173640929 - HAL1 LINE L1 -934 1573 1045 272 291 77 8 chr5 25989245 25989362 -173640788 + MLT1G1 LTR MaLR 1 125 -470 250 218 109 24 chr5 25989361 25989458 -173640692 + MLT1F1 LTR MaLR 9 119 -411 * 242 29 29 0 chr5 25989669 25989704 -173640446 + (GA)n Simple_repeat Simple_repeat 2 37 0 22 0 0 0 chr5 25989967 25989989 -173640161 + AT_rich Low_complexity Low_complexity 1 22 0 362 306 142 27 chr5 25990045 25990567 -173639583 + L1MC4a LINE L1 5313 5894 -1914 21 0 0 0 chr5 25990781 25990802 -173639348 + AT_rich Low_complexity Low_complexity 1 21 0 2235 105 0 0 chr5 25990982 25991286 -173638864 - AluSg1 SINE Alu -5 304 1 2004 119 3 10 chr5 25991779 25991819 -173638331 - AluSc SINE Alu 0 309 270 207 0 0 0 chr5 25991819 25991842 -173638308 + (GA)n Simple_repeat Simple_repeat 1 23 0 2004 119 3 10 chr5 25991842 25992112 -173638038 - AluSc SINE Alu -39 270 1 1727 178 7 3 chr5 25992191 25992489 -173637661 - AluJo SINE Alu -13 299 1 2125 100 0 4 chr5 25992786 25993067 -173637083 - AluSq SINE Alu -33 280 1 2171 110 0 16 chr5 25993778 25994086 -173636064 - AluSq SINE Alu -8 305 3 185 94 31 0 chr5 25994141 25994173 -173635977 + (TAA)n Simple_repeat Simple_repeat 1 33 0 2542 40 0 0 chr5 25994184 25994487 -173635663 - AluY SINE Alu -8 303 1 181 284 171 0 chr5 25996423 25996511 -173633639 + L2 LINE L2 3170 3272 0 26 88 0 0 chr5 25997625 25997693 -173632457 + AT_rich Low_complexity Low_complexity 1 68 0 226 382 99 8 chr5 25997784 25997915 -173632235 - MIR3 SINE MIR -60 148 6 207 100 0 0 chr5 26000247 26000277 -173629873 + (TA)n Simple_repeat Simple_repeat 2 31 0 183 42 0 0 chr5 26000960 26000984 -173629166 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 243 0 0 0 chr5 26001446 26001473 -173628677 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 704 266 73 68 chr5 26001599 26002097 -173628053 + L2 LINE L2 2531 3034 -279 198 0 0 0 chr5 26002131 26002153 -173627997 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 251 355 11 0 chr5 26002183 26002276 -173627874 + L2 LINE L2 3205 3298 -15 186 103 0 0 chr5 26002276 26002305 -173627845 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 269 256 104 76 chr5 26002315 26002565 -173627585 + MER20B DNA MER1_type 519 775 -8 23 33 0 0 chr5 26004432 26004462 -173625688 + AT_rich Low_complexity Low_complexity 1 30 0 304 250 76 22 chr5 26004595 26004687 -173625463 - MER5A DNA MER1_type -83 106 10 27 0 0 0 chr5 26005278 26005305 -173624845 + AT_rich Low_complexity Low_complexity 1 27 0 209 346 0 26 chr5 26007832 26007910 -173622240 - L2 LINE L2 -181 3091 3016 225 94 0 0 chr5 26007935 26007967 -173622183 + (TG)n Simple_repeat Simple_repeat 2 33 0 896 198 71 45 chr5 26008275 26008543 -173621607 + ORSL DNA AcHobo 1 275 0 289 263 61 20 chr5 26008621 26008720 -173621430 - MIR SINE MIR -71 137 35 1772 244 61 56 chr5 26010631 26011421 -173618729 + L1ME1 LINE L1 3599 4395 -1751 1525 201 10 3 chr5 26011421 26011715 -173618435 + AluJo SINE Alu 12 307 -5 1772 244 61 56 chr5 26011715 26011781 -173618369 + L1ME1 LINE L1 4395 4459 -1687 2259 293 49 62 chr5 26011799 26011934 -173618216 + L1ME1 LINE L1 5080 5215 -951 2055 115 13 3 chr5 26011934 26012238 -173617912 + AluSq SINE Alu 1 307 -6 2259 293 49 62 chr5 26012238 26013189 -173616961 + L1ME1 LINE L1 5215 6155 -11 610 157 28 0 chr5 26013191 26013299 -173616851 + L1M2 LINE L1 5363 5473 -839 2272 115 0 0 chr5 26013301 26013613 -173616537 + AluSx SINE Alu 1 312 0 2353 90 0 0 chr5 26015266 26015565 -173614585 - AluSc SINE Alu -10 299 1 227 374 24 0 chr5 26015680 26015763 -173614387 - L2 LINE L2 0 3272 3188 21 0 0 0 chr5 26017186 26017207 -173612943 + AT_rich Low_complexity Low_complexity 1 21 0 213 298 107 0 chr5 26018028 26018112 -173612038 + L2 LINE L2 3161 3253 -19 187 314 0 0 chr5 26018216 26018267 -173611883 - MIR SINE MIR -155 107 57 583 186 70 16 chr5 26018279 26018408 -173611742 + AluJo SINE Alu 1 136 -176 1192 252 153 46 chr5 26018594 26019117 -173611033 + MLT1E LTR MaLR 15 593 0 434 339 81 37 chr5 26022045 26022507 -173607643 + L2 LINE L2 2793 3282 -31 770 202 8 97 chr5 26024075 26024313 -173605837 - MER20 DNA MER1_type 0 219 3 219 295 13 26 chr5 26024867 26024945 -173605205 - MIR3 SINE MIR -3 205 129 22 35 0 0 chr5 26025908 26025937 -173604213 + AT_rich Low_complexity Low_complexity 1 29 0 1671 173 9 43 chr5 26025995 26026173 -173603977 + MLT1A1-int LTR MaLR 1424 1588 -147 2510 54 0 0 chr5 26026173 26026470 -173603680 - AluY SINE Alu -14 297 1 1671 173 9 43 chr5 26026470 26026614 -173603536 + MLT1A1-int LTR MaLR 1588 1735 0 1223 241 71 3 chr5 26026636 26026972 -173603178 + MLT1A1 LTR MaLR 5 363 -2 453 304 57 30 chr5 26028413 26028676 -173601474 - L2 LINE L2 -67 3246 2977 324 307 21 7 chr5 26028689 26028829 -173601321 + (TA)n Simple_repeat Simple_repeat 2 143 0 557 314 159 19 chr5 26028830 26029145 -173601005 - L2 LINE L2 -349 2965 2607 241 254 56 14 chr5 26029863 26029934 -173600216 - MIR3 SINE MIR -39 169 96 298 328 44 33 chr5 26031143 26031326 -173598824 + L2 LINE L2 3085 3269 -44 305 257 0 83 chr5 26032526 26032635 -173597515 + L1MC4 LINE L1 6614 6713 -1329 24 0 0 0 chr5 26033580 26033604 -173596546 + AT_rich Low_complexity Low_complexity 1 24 0 943 166 13 0 chr5 26033605 26033756 -173596394 + AluSg/x SINE Alu 135 287 -25 240 137 0 0 chr5 26033758 26033809 -173596341 + L1MC4 LINE L1 6653 6703 -1339 307 306 24 0 chr5 26033814 26033899 -173596251 + L1MC4 LINE L1 6617 6703 -1339 305 315 36 0 chr5 26033819 26033930 -173596220 - L1MC4 LINE L1 -1339 6703 6589 * 739 321 25 4 chr5 26034478 26034721 -173595429 + MIR SINE MIR 11 258 -4 336 24 0 0 chr5 26035823 26035864 -173594286 + (CA)n Simple_repeat Simple_repeat 2 42 0 240 257 50 40 chr5 26036177 26036278 -173593872 + MARNA DNA Mariner 137 238 -348 242 325 12 24 chr5 26036294 26036377 -173593773 - MER5A DNA MER1_type -30 159 78 2028 137 55 25 chr5 26036505 26036869 -173593281 + THE1C LTR MaLR 1 375 0 1699 174 7 16 chr5 26037243 26037547 -173592603 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr5 26037655 26037680 -173592470 + AT_rich Low_complexity Low_complexity 1 25 0 401 333 44 48 chr5 26037823 26038075 -173592075 - MIR SINE MIR -10 252 2 21 0 0 0 chr5 26038768 26038789 -173591361 + AT_rich Low_complexity Low_complexity 1 21 0 279 122 0 0 chr5 26039864 26039913 -173590237 + (ATG)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr5 26041762 26041783 -173588367 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 26043022 26043045 -173587105 + AT_rich Low_complexity Low_complexity 1 23 0 715 250 91 14 chr5 26043166 26043374 -173586776 - MIR SINE MIR -20 242 19 607 87 0 0 chr5 26043633 26043725 -173586425 + L1PA15 LINE L1 6072 6163 -2 241 323 21 11 chr5 26044229 26044322 -173585828 + L2 LINE L2 3220 3313 0 22 35 0 0 chr5 26044510 26044539 -173585611 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr5 26045253 26045279 -173584871 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr5 26046047 26046078 -173584072 + AT_rich Low_complexity Low_complexity 1 31 0 246 315 11 0 chr5 26047278 26047367 -173582783 + GA-rich Low_complexity Low_complexity 1 90 0 29 84 0 0 chr5 26052470 26052541 -173577609 + AT_rich Low_complexity Low_complexity 1 71 0 207 186 0 0 chr5 26052824 26052867 -173577283 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 23 0 0 0 chr5 26053603 26053626 -173576524 + AT_rich Low_complexity Low_complexity 1 23 0 472 291 118 17 chr5 26054004 26054241 -173575909 - MLT1J LTR MaLR -239 272 12 21 0 0 0 chr5 26054444 26054465 -173575685 + AT_rich Low_complexity Low_complexity 1 21 0 1865 125 4 7 chr5 26055816 26056097 -173574053 - AluSg SINE Alu -30 280 1 637 174 28 69 chr5 26056536 26056713 -173573437 + LTR48 LTR ERV1 3 169 -591 * 1153 193 88 40 chr5 26056708 26056982 -173573168 + LTR3 LTR ERVK 5 291 -141 15097 127 29 8 chr5 26056982 26057092 -173573058 + HERVK3 LTR ERVK 473 579 -6664 2089 113 0 28 chr5 26057092 26057410 -173572740 + AluSc SINE Alu 1 309 0 15097 127 29 8 chr5 26057410 26059687 -173570463 + HERVK3 LTR ERVK 579 2910 -4333 1366 95 0 0 chr5 26059674 26059863 -173570287 + HERVK3 LTR ERVK 4119 4307 -2936 * 4312 127 11 1 chr5 26059862 26060530 -173569620 + HERVK3 LTR ERVK 4685 5358 -1885 * 7146 98 3 1 chr5 26060525 26061503 -173568647 + HERVK3 LTR ERVK 6264 7243 0 1069 234 94 12 chr5 26061507 26061763 -173568387 + LTR3 LTR ERVK 5 281 -151 6601 69 3 10 chr5 26061764 26062659 -173567491 - L1PA6 LINE L1 0 6154 5266 25 31 0 0 chr5 26063177 26063209 -173566941 + AT_rich Low_complexity Low_complexity 1 32 0 6090 148 17 12 chr5 26063327 26064486 -173565664 - L1MA2 LINE L1 0 6304 5141 2056 133 0 3 chr5 26064587 26064888 -173565262 - AluSg SINE Alu -10 300 1 21 0 0 0 chr5 26065224 26065245 -173564905 + AT_rich Low_complexity Low_complexity 1 21 0 247 294 8 8 chr5 26065251 26065377 -173564773 + (TA)n Simple_repeat Simple_repeat 2 127 0 1614 239 115 72 chr5 26065452 26066147 -173564003 - MER50 LTR ERV1 0 734 10 238 397 17 9 chr5 26066807 26066923 -173563227 - MIR3 SINE MIR -1 207 91 180 0 0 0 chr5 26067846 26067866 -173562284 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 594 171 0 43 chr5 26067936 26068053 -173562097 + AluJb SINE Alu 178 289 -23 310 243 19 65 chr5 26068879 26068986 -173561164 + L1ME3A LINE L1 5565 5666 -504 2042 170 66 24 chr5 26068997 26069408 -173560742 + LTR3 LTR ERVK 5 432 0 266 186 0 0 chr5 26069408 26069451 -173560699 + HERVK3 LTR ERVK 1 43 -7200 785 272 75 0 chr5 26069509 26069788 -173560362 + L1ME3A LINE L1 5859 6158 -12 26696 76 9 7 chr5 26070088 26073815 -173556335 - L1P LINE L1 -804 5342 1607 2138 108 7 3 chr5 26074150 26074446 -173555704 - AluSx SINE Alu -15 297 1 537 314 35 9 chr5 26074697 26074926 -173555224 + L1ME1 LINE L1 5928 6162 -4 24 53 0 0 chr5 26075929 26075967 -173554183 + AT_rich Low_complexity Low_complexity 1 38 0 1933 176 77 15 chr5 26076512 26076710 -173553440 + MSTA LTR MaLR 1 185 -243 258 32 0 0 chr5 26076710 26076741 -173553409 + (TC)n Simple_repeat Simple_repeat 2 32 0 1933 176 77 15 chr5 26076741 26076945 -173553205 + MSTA LTR MaLR 185 428 0 4052 208 62 20 chr5 26076979 26078491 -173551659 - L1MB2 LINE L1 0 6171 4589 21 71 0 0 chr5 26079348 26079390 -173550760 + AT_rich Low_complexity Low_complexity 1 42 0 1247 63 6 0 chr5 26079393 26079588 -173550562 - AluY SINE Alu 0 329 134 21 0 0 0 chr5 26080649 26080670 -173549480 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 26082336 26082364 -173547786 + AT_rich Low_complexity Low_complexity 1 28 0 9217 142 18 37 chr5 26083013 26084640 -173545510 - L1P LINE L1 -4539 1607 11 715 200 0 35 chr5 26084646 26084816 -173545334 + LTR3 LTR ERVK 267 430 -2 257 154 0 0 chr5 26084822 26084861 -173545289 + HERVK3 LTR ERVK 1 39 -7204 2546 171 96 22 chr5 26084861 26085416 -173544734 + LTR48 LTR ERV1 192 787 0 23 0 0 0 chr5 26085929 26085952 -173544198 + AT_rich Low_complexity Low_complexity 1 23 0 742 277 128 34 chr5 26086050 26086371 -173543779 - LTR40a LTR ERVL 0 519 169 2556 87 29 3 chr5 26086769 26087147 -173543003 - L1PA13 LINE L1 -5 6158 5771 242 333 105 35 chr5 26088304 26088475 -173541675 + MER5A DNA MER1_type 7 189 0 233 228 0 18 chr5 26089090 26089147 -173541003 + GA-rich Low_complexity Low_complexity 3 58 0 618 281 23 0 chr5 26089205 26089376 -173540774 + MER45A DNA AcHobo 1 175 -3 405 335 21 21 chr5 26089657 26089848 -173540302 - L2 LINE L2 -4 3309 3119 25 51 0 0 chr5 26090607 26090646 -173539504 + AT_rich Low_complexity Low_complexity 1 39 0 722 181 0 8 chr5 26092604 26092731 -173537419 - FLAM_C SINE Alu -7 126 1 22 0 0 0 chr5 26092784 26092806 -173537344 + AT_rich Low_complexity Low_complexity 1 22 0 1226 321 106 12 chr5 26093029 26093235 -173536915 - L2 LINE L2 0 3313 3128 1224 198 54 124 chr5 26093235 26093345 -173536805 + MLT1D LTR MaLR 4 120 -385 2262 103 0 3 chr5 26093345 26093656 -173536494 + AluSg SINE Alu 1 310 0 1224 198 54 124 chr5 26093656 26093695 -173536455 + MLT1D LTR MaLR 120 160 -345 183 42 0 0 chr5 26093695 26093719 -173536431 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1224 198 54 124 chr5 26093719 26094108 -173536042 + MLT1D LTR MaLR 160 505 0 1226 321 106 12 chr5 26094108 26094732 -173535418 - L2 LINE L2 -185 3128 2403 30 27 0 0 chr5 26095471 26095508 -173534642 + AT_rich Low_complexity Low_complexity 1 37 0 37 39 0 0 chr5 26095603 26095654 -173534496 + AT_rich Low_complexity Low_complexity 1 51 0 26 30 0 0 chr5 26096086 26096119 -173534031 + AT_rich Low_complexity Low_complexity 1 33 0 2579 55 0 0 chr5 26096859 26097168 -173532982 + AluY SINE Alu 1 309 -2 221 149 43 0 chr5 26097487 26097534 -173532616 + CT-rich Low_complexity Low_complexity 3 51 0 206 0 69 0 chr5 26098322 26098351 -173531799 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1947 146 3 0 chr5 26098418 26098719 -173531431 - AluSx SINE Alu -10 302 1 362 264 11 0 chr5 26099701 26099788 -173530362 + MIR SINE MIR 78 165 -97 1678 188 10 0 chr5 26100028 26100321 -173529829 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr5 26100624 26100660 -173529490 + AT_rich Low_complexity Low_complexity 1 36 0 2231 193 27 2 chr5 26101084 26101498 -173528652 + MSTB LTR MaLR 1 424 -2 222 204 0 0 chr5 26101621 26101670 -173528480 + (TG)n Simple_repeat Simple_repeat 2 50 0 747 244 6 0 chr5 26101909 26102073 -173528077 - MER2 DNA MER2_type -180 165 1 429 318 108 0 chr5 26102594 26102770 -173527380 + MIR SINE MIR 3 197 -65 34 24 0 0 chr5 26102903 26102944 -173527206 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr5 26102977 26102998 -173527152 + AT_rich Low_complexity Low_complexity 1 21 0 2044 120 19 3 chr5 26104265 26104573 -173525577 + AluSp SINE Alu 1 313 0 1509 182 64 33 chr5 26104593 26104923 -173525227 + MER46B DNA MER2_type 22 236 0 266 339 47 47 chr5 26105141 26105312 -173524838 - MIR SINE MIR -86 176 6 231 88 0 0 chr5 26105652 26105686 -173524464 + (TG)n Simple_repeat Simple_repeat 1 34 0 260 370 37 40 chr5 26106041 26106365 -173523785 + L1ME LINE L1 102 424 -5646 285 128 21 0 chr5 26106369 26106416 -173523734 + L1PB4 LINE L1 6049 6096 -60 307 192 26 0 chr5 26106520 26106598 -173523552 + L1PB4 LINE L1 6074 6153 -3 612 158 0 0 chr5 26106694 26106789 -173523361 + THE1C LTR MaLR 1 95 -280 686 119 0 0 chr5 26106794 26106895 -173523255 + THE1-int LTR MaLR 123 223 -1357 * 1203 149 5 0 chr5 26106894 26107088 -173523062 + THE1-int LTR MaLR 818 1012 -568 2610 164 36 7 chr5 26107088 26107534 -173522616 + MSTA-int LTR MaLR 1193 1651 0 274 108 31 31 chr5 26107534 26107599 -173522551 + (ATATG)n Simple_repeat Simple_repeat 3 67 0 585 234 0 0 chr5 26107599 26107710 -173522440 + MSTA LTR MaLR 1 111 -317 524 174 0 0 chr5 26107717 26107809 -173522341 + MSTA LTR MaLR 337 428 0 260 244 63 55 chr5 26107974 26108101 -173522049 + MLT1K LTR MaLR 99 226 -428 * 863 274 53 51 chr5 26108084 26108518 -173521632 + MLT2B1 LTR ERVL 86 520 0 561 254 56 106 chr5 26108520 26108894 -173521256 + MLT1E3 LTR MaLR 136 487 -139 2329 206 9 10 chr5 26108894 26109468 -173520682 + L1MA2 LINE L1 3534 4108 -3457 5168 189 14 13 chr5 26109474 26110519 -173519631 + L1MA2 LINE L1 4706 5751 -1814 6231 180 110 64 chr5 26110522 26112121 -173518029 - MER52A LTR ERV1 -2 1753 1 5536 219 9 8 chr5 26112122 26112357 -173517793 + L1MA2 LINE L1 5750 5983 -1740 1655 170 181 6 chr5 26112357 26112721 -173517429 - MSTA LTR MaLR 0 428 1 5536 219 9 8 chr5 26112721 26114454 -173515696 + L1MA2 LINE L1 5983 7722 -1 580 233 90 0 chr5 26114514 26114647 -173515503 + FRAM SINE Alu 1 145 -31 366 259 145 23 chr5 26114748 26114879 -173515271 + MIR3 SINE MIR 17 163 -45 31 68 0 0 chr5 26114881 26114940 -173515210 + AT_rich Low_complexity Low_complexity 1 59 0 301 270 14 0 chr5 26115897 26115971 -173514179 + MER58 DNA MER1_type 128 2407 -13 848 206 6 0 chr5 26116171 26116351 -173513799 - L1 LINE L1 -799 5347 5167 410 390 10 5 chr5 26116475 26116680 -173513470 - L2 LINE L2 -210 3062 2857 286 359 28 37 chr5 26116809 26117026 -173513124 + MLT1K LTR MaLR 194 408 -180 348 176 0 0 chr5 26117040 26117108 -173513042 + GA-rich Low_complexity Low_complexity 3 70 0 424 354 0 0 chr5 26117483 26117610 -173512540 - L2 LINE L2 0 3313 3187 12086 165 81 15 chr5 26117625 26118624 -173511526 + Tigger1 DNA MER2_type 2 934 -1484 2382 132 65 7 chr5 26118624 26119027 -173511123 - MSTA LTR MaLR 0 428 3 12086 165 81 15 chr5 26119027 26120294 -173509856 + Tigger1 DNA MER2_type 934 2418 0 5302 167 24 19 chr5 26120916 26122023 -173508127 - L1 LINE L1 -1109 6456 5344 * 11706 164 99 5 chr5 26122016 26123867 -173506283 - L1 LINE L1 -3854 3711 1595 183 42 0 0 chr5 26123867 26123891 -173506259 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 11706 164 99 5 chr5 26123891 26124365 -173505785 - L1 LINE L1 -5970 1595 1167 5035 44 24 2 chr5 26124787 26125418 -173504732 - L1PA4 LINE L1 0 6155 5511 2002 135 7 0 chr5 26127875 26128157 -173501993 - AluSc SINE Alu -25 284 1 1440 181 4 8 chr5 26128344 26128610 -173501540 - MER47A DNA MER2_type 0 366 102 1704 135 52 1 chr5 26128610 26128986 -173501164 + L1MA5 LINE L1 5189 5581 -719 1699 127 0 4 chr5 26128987 26129224 -173500926 + AluSx SINE Alu 1 236 -76 1444 159 12 52 chr5 26129224 26129362 -173500788 + L1MA5 LINE L1 5985 6127 -173 1900 163 0 0 chr5 26129362 26129657 -173500493 + AluSx SINE Alu 1 295 -17 1444 159 12 52 chr5 26129657 26129845 -173500305 + L1MA5 LINE L1 6127 6298 -2 234 118 0 118 chr5 26129851 26129902 -173500248 - MER47A DNA MER2_type -241 125 81 24 53 0 0 chr5 26130044 26130082 -173500068 + AT_rich Low_complexity Low_complexity 1 38 0 186 133 0 0 chr5 26130714 26130744 -173499406 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 23 68 0 0 chr5 26132185 26132229 -173497921 + AT_rich Low_complexity Low_complexity 1 44 0 957 231 69 26 chr5 26132559 26132905 -173497245 + MLT1A1 LTR MaLR 1 361 -4 1398 198 88 18 chr5 26133052 26133395 -173496755 - MLT1A2 LTR MaLR -7 367 1 1874 133 22 4 chr5 26133509 26133839 -173496311 + AluSq SINE Alu 1 335 0 23 0 0 0 chr5 26134163 26134186 -173495964 + AT_rich Low_complexity Low_complexity 1 23 0 186 133 0 0 chr5 26134723 26134753 -173495397 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 24 32 0 0 chr5 26135699 26135730 -173494420 + AT_rich Low_complexity Low_complexity 1 31 0 21 71 0 0 chr5 26136997 26137039 -173493111 + AT_rich Low_complexity Low_complexity 1 42 0 330 343 29 41 chr5 26137134 26137376 -173492774 - HAL1b LINE L1 -664 684 446 2296 88 0 32 chr5 26137473 26137781 -173492369 - AluSg1 SINE Alu -8 301 4 23 0 0 0 chr5 26137787 26137810 -173492340 + AT_rich Low_complexity Low_complexity 1 23 0 222 222 22 0 chr5 26137912 26137957 -173492193 - L2 LINE L2 -12 3260 3215 25 0 0 0 chr5 26138809 26138834 -173491316 + AT_rich Low_complexity Low_complexity 1 25 0 2114 105 25 0 chr5 26138860 26139146 -173491004 - AluSx SINE Alu -11 301 9 23 78 0 0 chr5 26139484 26139535 -173490615 + AT_rich Low_complexity Low_complexity 1 51 0 1722 132 6 89 chr5 26139630 26139955 -173490195 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 26140295 26140316 -173489834 + AT_rich Low_complexity Low_complexity 1 21 0 1632 164 0 10 chr5 26140564 26140874 -173489276 - L1MA7 LINE L1 0 6291 5985 837 303 67 24 chr5 26141291 26141805 -173488345 - L1ME LINE L1 -2452 3930 3440 180 0 0 0 chr5 26141805 26141825 -173488325 + (CATTT)n Simple_repeat Simple_repeat 1 20 0 1784 166 3 27 chr5 26141826 26142127 -173488023 - AluJb SINE Alu -18 294 1 837 303 67 24 chr5 26142127 26142191 -173487959 - L1ME LINE L1 -2941 3441 3325 328 238 173 42 chr5 26142200 26142368 -173487782 - L1ME LINE L1 -4660 1724 1535 476 286 63 22 chr5 26142684 26143051 -173487099 - L1ME LINE L1 -4985 1387 1006 5206 54 15 4 chr5 26143070 26143875 -173486275 - L1PA7 LINE L1 -228 5926 5119 1547 80 9 0 chr5 26143876 26144088 -173486062 + L1PA7 LINE L1 5940 6153 -1 358 388 135 16 chr5 26144579 26144891 -173485259 - L1ME LINE L1 -6026 537 189 737 199 0 0 chr5 26145101 26145232 -173484918 + FLAM_C SINE Alu 1 131 -12 836 201 179 45 chr5 26146756 26147065 -173483085 - MER83C LTR ERV1 -46 327 1 187 156 16 125 chr5 26147104 26147168 -173482982 - L2 LINE L2 -854 2460 2404 1152 340 176 12 chr5 26147170 26147986 -173482164 - L2 LINE L2 -1834 1480 531 405 307 159 0 chr5 26148136 26148325 -173481825 + L3 LINE CR1 1306 1524 -53 182 268 0 0 chr5 26148464 26148505 -173481645 - L2 LINE L2 -39 3233 3193 2326 60 0 23 chr5 26148729 26149029 -173481121 + AluY SINE Alu 1 293 -18 199 226 38 19 chr5 26149419 26149472 -173480678 + L2 LINE L2 2921 2974 -340 217 250 0 0 chr5 26149728 26149780 -173480370 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 184 337 97 72 chr5 26149899 26150824 -173479326 - L2 LINE L2 -638 2676 1729 230 236 106 24 chr5 26151439 26151562 -173478588 + L1ME LINE L1 5741 5873 -248 2294 93 14 14 chr5 26153491 26153846 -173476304 - L1P LINE L1 -1559 4587 4233 3939 98 43 5 chr5 26153846 26154429 -173475721 - LTR14B LTR ERVK 0 608 4 774 37 56 28 chr5 26154433 26154541 -173475609 - HERVK14 LTR ERVK 0 5945 5835 318 222 0 18 chr5 26154541 26154616 -173475534 - MER41C LTR ERV1 -493 61 1 3406 68 23 1 chr5 26154616 26155279 -173474871 - HERVK3 LTR ERVK -186 5759 5013 949 83 0 0 chr5 26155278 26155399 -173474751 - HERVK3 LTR ERVK -1545 4400 4280 * 250 62 0 0 chr5 26155551 26155583 -173474567 - HERVK3 LTR ERVK -7025 218 187 180 246 0 0 chr5 26155591 26155660 -173474490 + CT-rich Low_complexity Low_complexity 2 70 0 2973 127 51 2 chr5 26156385 26156834 -173473316 - HERVK3 LTR ERVK -3769 2176 1706 5555 66 3 0 chr5 26156869 26157566 -173472584 - HERVK3 LTR ERVK -5246 699 1 4171 91 39 5 chr5 26157566 26158151 -173471999 - LTR14B LTR ERVK 0 608 4 19231 111 10 4 chr5 26158155 26161056 -173469094 - L1P LINE L1 -1908 4238 1320 6274 80 20 6 chr5 26161056 26162570 -173467580 + L1PA7 LINE L1 4624 6149 -5 22 0 0 0 chr5 26162570 26162592 -173467558 + AT_rich Low_complexity Low_complexity 1 22 0 3419 189 36 55 chr5 26162592 26164200 -173465950 - L1PB4 LINE L1 -20 6838 5263 2882 92 0 0 chr5 26164200 26164580 -173465570 + MLT2A1 LTR ERVL 1 380 -64 387 59 294 15 chr5 26164626 26164653 -173465497 + MLT2A1 LTR ERVL 358 376 -68 733 11 21 0 chr5 26164653 26164747 -173465403 + (TA)n Simple_repeat Simple_repeat 2 97 0 387 59 294 15 chr5 26164747 26164787 -173465363 + MLT2A1 LTR ERVL 376 444 0 240 98 39 39 chr5 26164822 26164873 -173465277 - FAM SINE Alu -6 173 123 7633 238 61 17 chr5 26164875 26167668 -173462482 - L1PB4 LINE L1 -1613 5235 2214 2202 103 10 0 chr5 26167668 26167969 -173462181 - AluY SINE Alu -7 304 1 7633 238 61 17 chr5 26167969 26169154 -173460996 - L1PB4 LINE L1 -4634 2214 1082 356 387 84 31 chr5 26169588 26169779 -173460371 - L1PB4 LINE L1 -6062 787 587 333 394 89 25 chr5 26170084 26170287 -173459863 - L1PB4 LINE L1 -6062 787 572 485 286 179 30 chr5 26170302 26170564 -173459586 - L1PB4 LINE L1 -6399 450 150 197 381 9 0 chr5 26170600 26170705 -173459445 - L2 LINE L2 -1097 2217 2112 542 347 28 14 chr5 26170971 26171187 -173458963 - MIR SINE MIR 0 262 44 1601 200 45 79 chr5 26171272 26171741 -173458409 + MLT1C LTR MaLR 5 457 -10 1025 217 175 29 chr5 26172066 26172380 -173457770 + MLT1A2 LTR MaLR 4 363 -11 310 307 37 16 chr5 26173014 26173164 -173456986 - MIR SINE MIR -65 143 36 25 0 0 0 chr5 26173498 26173523 -173456627 + AT_rich Low_complexity Low_complexity 1 25 0 27 62 0 0 chr5 26174138 26174186 -173455964 + AT_rich Low_complexity Low_complexity 1 48 0 2041 243 20 45 chr5 26174497 26175095 -173455055 - MER92B LTR ERV1 0 636 54 23 78 0 0 chr5 26175095 26175146 -173455004 + AT_rich Low_complexity Low_complexity 1 51 0 1378 148 63 11 chr5 26175146 26175430 -173454720 - L1MA8 LINE L1 -20 6271 5973 317 115 0 0 chr5 26176083 26176140 -173454010 - MLT2C1 LTR ERVL 0 414 349 1568 156 31 89 chr5 26176140 26176498 -173453652 + MER2 DNA MER2_type 1 337 -8 * 1667 247 7 51 chr5 26176487 26176937 -173453213 - MLT2B1 LTR ERVL -90 430 1 215 261 14 43 chr5 26176937 26177006 -173453144 - L2 LINE L2 -704 2610 2544 374 290 55 59 chr5 26177116 26177371 -173452779 - L2 LINE L2 -1240 2074 1821 28 0 0 0 chr5 26178430 26178458 -173451692 + AT_rich Low_complexity Low_complexity 1 28 0 410 354 115 10 chr5 26178749 26179063 -173451087 - L3 LINE CR1 -1 1576 1230 262 331 40 33 chr5 26179194 26179345 -173450805 - L3 LINE CR1 -816 761 610 418 336 72 68 chr5 26179395 26179676 -173450474 + L1MEd LINE L1 37 315 -5804 2096 92 3 0 chr5 26179676 26180019 -173450131 + AluSp SINE Alu 1 344 0 418 336 72 68 chr5 26180019 26180473 -173449677 + L1MEd LINE L1 315 776 -5343 414 291 32 67 chr5 26180519 26180832 -173449318 + L1MEd LINE L1 865 1166 -4953 283 277 51 18 chr5 26180871 26181041 -173449109 + L1MEd LINE L1 1354 1628 -862 345 364 84 34 chr5 26181887 26182184 -173447966 - L3 LINE CR1 -1096 481 170 3391 34 2 0 chr5 26182203 26182613 -173447537 - L1PA4 LINE L1 0 6155 5745 21 36 0 0 chr5 26182656 26182684 -173447466 + AT_rich Low_complexity Low_complexity 1 28 0 223 333 105 0 chr5 26183336 26183450 -173446700 + MIR SINE MIR 74 199 -63 408 229 28 69 chr5 26183547 26183691 -173446459 - MIR SINE MIR -3 259 122 210 143 0 0 chr5 26184149 26184184 -173445966 + (TG)n Simple_repeat Simple_repeat 2 36 0 225 247 41 52 chr5 26184260 26184357 -173445793 + MLT1I LTR MaLR 120 215 -194 262 227 13 0 chr5 26184542 26184617 -173445533 + MER116 DNA Mariner 5 80 0 1849 230 75 19 chr5 26187195 26187673 -173442477 - MLT1D LTR MaLR 0 505 1 25 31 0 0 chr5 26187908 26187940 -173442210 + AT_rich Low_complexity Low_complexity 1 32 0 292 268 89 16 chr5 26188798 26188921 -173441229 + LTR67 LTR ERVL 424 555 -2 22 0 0 0 chr5 26189020 26189042 -173441108 + AT_rich Low_complexity Low_complexity 1 22 0 182 323 199 0 chr5 26189421 26189582 -173440568 - L2 LINE L2 -1060 2254 2062 189 325 44 62 chr5 26190195 26190355 -173439795 - L2 LINE L2 -152 3161 3005 301 70 35 0 chr5 26190719 26190776 -173439374 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 206 153 42 42 chr5 26190944 26191016 -173439134 + (TATAA)n Simple_repeat Simple_repeat 3 74 0 24 0 0 0 chr5 26193518 26193542 -173436608 + AT_rich Low_complexity Low_complexity 1 24 0 315 269 21 0 chr5 26193831 26193924 -173436226 - MER5A DNA MER1_type -79 110 16 2160 44 11 4 chr5 26193950 26194223 -173435927 + L1PA3 LINE L1 5870 6144 -11 255 31 0 0 chr5 26194240 26194272 -173435878 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 213 39 0 0 chr5 26194325 26194351 -173435799 + (TTTTTG)n Simple_repeat Simple_repeat 1 26 0 1073 292 109 81 chr5 26194391 26195251 -173434899 + L2 LINE L2 2429 3308 -5 32 57 0 0 chr5 26195396 26195449 -173434701 + AT_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr5 26195626 26195654 -173434496 + AT_rich Low_complexity Low_complexity 1 28 0 299 316 26 9 chr5 26196204 26196318 -173433832 - MER94 DNA DNA -1 133 18 246 340 50 46 chr5 26196497 26196738 -173433412 - L3 LINE CR1 -200 1377 1136 223 186 0 0 chr5 26197068 26197111 -173433039 + T-rich Low_complexity Low_complexity 1 43 0 445 341 109 57 chr5 26197243 26197990 -173432160 + L2 LINE L2 2517 3304 -9 1784 156 10 3 chr5 26198845 26199184 -173430966 - AluSx SINE Alu 0 312 1 482 101 0 13 chr5 26199296 26199375 -173430775 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1818 160 3 3 chr5 26199611 26199905 -173430245 - AluSx SINE Alu -18 294 1 247 333 79 0 chr5 26200187 26200301 -173429849 + MIR SINE MIR 139 261 -1 21 0 0 0 chr5 26200364 26200385 -173429765 + AT_rich Low_complexity Low_complexity 1 21 0 739 258 67 48 chr5 26200606 26200874 -173429276 - L1ME2 LINE L1 0 6098 5826 3425 268 85 50 chr5 26200884 26203714 -173426436 - L1ME2 LINE L1 -1076 5004 2075 22 35 0 0 chr5 26203714 26203743 -173426407 + AT_rich Low_complexity Low_complexity 1 29 0 628 271 60 21 chr5 26204013 26204206 -173425944 - L1ME2 LINE L1 -4475 1605 1396 450 49 0 0 chr5 26204206 26204267 -173425883 + (TG)n Simple_repeat Simple_repeat 2 62 0 628 271 60 21 chr5 26204267 26204357 -173425793 - L1ME2 LINE L1 -4684 1396 1311 271 162 0 29 chr5 26204458 26204526 -173425624 + CT-rich Low_complexity Low_complexity 5 70 0 1442 252 26 44 chr5 26204671 26205099 -173425051 - MLT1D LTR MaLR -64 441 22 430 272 68 19 chr5 26205116 26205381 -173424769 - L1ME2 LINE L1 -5167 903 626 1547 209 23 13 chr5 26205396 26205703 -173424447 + MLT2B3 LTR ERVL 13 322 -232 934 209 52 0 chr5 26205711 26205902 -173424248 + ERVL-B3 LTR ERVL 3644 3844 -1920 3114 181 34 26 chr5 26206010 26206636 -173423514 + ERVL-B3 LTR ERVL 4830 5460 -304 1881 156 24 0 chr5 26206635 26206968 -173423182 + ERVL-B3 LTR ERVL 5417 5757 -7 * 2416 204 43 43 chr5 26206968 26207522 -173422628 + MLT2B3 LTR ERVL 1 554 0 334 259 29 72 chr5 26207525 26207664 -173422486 - L1ME2 LINE L1 -5445 625 493 502 308 99 58 chr5 26207738 26208154 -173421996 - L1ME2 LINE L1 -5611 459 27 348 354 59 29 chr5 26208655 26208958 -173421192 - L2 LINE L2 -214 3058 2747 432 314 91 29 chr5 26210231 26210473 -173419677 - MLT1J2 LTR MaLR -2 448 192 2053 125 0 6 chr5 26212198 26212509 -173417641 - AluSc SINE Alu 0 309 1 601 284 16 36 chr5 26212624 26212818 -173417332 + MIR SINE MIR 47 236 -26 21 57 0 0 chr5 26213470 26213505 -173416645 + AT_rich Low_complexity Low_complexity 1 35 0 340 296 126 36 chr5 26213684 26214296 -173415854 + HAL1 LINE L1 796 1462 -1045 2328 70 0 3 chr5 26214392 26214690 -173415460 - AluY SINE Alu -14 297 1 422 238 122 34 chr5 26215484 26215631 -173414519 - MLT1H1 LTR MaLR 0 555 396 2398 67 0 0 chr5 26215717 26216014 -173414136 + AluY SINE Alu 8 304 -7 189 233 27 110 chr5 26216019 26216092 -173414058 - L3b LINE CR1 -235 1348 1282 880 300 65 56 chr5 26216662 26217522 -173412628 + HAL1 LINE L1 1502 2369 -138 271 0 51 0 chr5 26218047 26218086 -173412064 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 490 204 18 9 chr5 26218086 26218199 -173411951 - L1MA9 LINE L1 -37 6275 6162 1044 242 85 24 chr5 26218233 26218526 -173411624 + MER58B DNA MER1_type 5 315 -26 324 0 0 0 chr5 26218527 26218563 -173411587 + (CA)n Simple_repeat Simple_repeat 1 36 0 273 57 0 0 chr5 26219770 26219805 -173410345 + (CA)n Simple_repeat Simple_repeat 2 36 0 270 152 0 0 chr5 26219813 26219859 -173410291 - L2 LINE L2 -1 3312 3267 1818 149 86 6 chr5 26220210 26220546 -173409604 + MER47A DNA MER2_type 2 364 -2 3792 165 27 14 chr5 26221043 26221781 -173408369 - L1PA16 LINE L1 0 6166 5419 2348 252 29 38 chr5 26221791 26222691 -173407459 + L1P LINE L1 2267 3158 -2988 602 229 0 16 chr5 26222815 26222937 -173407213 + MLT2C1 LTR ERVL 208 327 -70 7071 206 93 67 chr5 26222942 26225349 -173404801 + Tigger2 DNA MER2_type 1 2468 -250 2288 86 0 0 chr5 26225349 26225639 -173404511 + AluY SINE Alu 1 290 -21 1304 200 13 172 chr5 26225813 26225894 -173404256 + MER67C LTR ERV1 1 93 -551 582 153 95 0 chr5 26225894 26226031 -173404119 - L1MA9 LINE L1 0 6312 6163 1304 200 13 172 chr5 26226031 26226140 -173404010 + MER67C LTR ERV1 93 218 -426 2231 110 3 0 chr5 26226140 26226448 -173403702 - AluSx SINE Alu -3 309 1 1304 200 13 172 chr5 26226448 26226701 -173403449 + MER67C LTR ERV1 218 403 -241 281 138 52 17 chr5 26226728 26226786 -173403364 + MER67D LTR ERV1 455 514 0 499 313 82 5 chr5 26226787 26226995 -173403155 - MLT2F LTR ERVL -152 511 288 1238 156 9 17 chr5 26227051 26227282 -173402868 + MER4D LTR ERV1 1 229 -674 1435 176 0 4 chr5 26227426 26227682 -173402468 + L1PA15 LINE L1 5910 6164 -1 10400 220 29 16 chr5 26227688 26229494 -173400656 + ERVL-C1 LTR ERVL 102 1883 -3881 1897 157 93 42 chr5 26229494 26229713 -173400437 - MSTA LTR MaLR 0 428 222 2190 130 0 0 chr5 26229713 26230021 -173400129 - AluSx SINE Alu -4 308 1 1897 157 93 42 chr5 26230021 26230208 -173399942 - MSTA LTR MaLR -206 222 1 7478 176 33 42 chr5 26230208 26230379 -173399771 - MSTA-int LTR MaLR 0 1580 1409 180 0 0 0 chr5 26230379 26230399 -173399751 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 7478 176 33 42 chr5 26230399 26231320 -173398830 - MSTA-int LTR MaLR -171 1409 504 1663 131 29 0 chr5 26231320 26231565 -173398585 - AluSx SINE Alu 0 312 61 7478 176 33 42 chr5 26231565 26232065 -173398085 - MSTA-int LTR MaLR -1076 504 1 1572 165 132 26 chr5 26232065 26232452 -173397698 - MSTA LTR MaLR 0 428 1 10400 220 29 16 chr5 26232452 26234383 -173395767 + ERVL-C1 LTR ERVL 1882 3975 -1789 3028 174 64 33 chr5 26234380 26234878 -173395272 + ERVL-C1 LTR ERVL 4145 4667 -1097 * 1972 145 129 8 chr5 26234878 26235258 -173394892 + MSTA LTR MaLR 1 426 -2 3028 174 64 33 chr5 26235258 26235370 -173394780 + ERVL-C1 LTR ERVL 4667 4774 -990 802 293 12 12 chr5 26235374 26235616 -173394534 - MLT1A1 LTR MaLR -11 354 113 1409 159 30 81 chr5 26236772 26237106 -173393044 + MER44D DNA MER2_type 23 609 0 2033 193 94 33 chr5 26237364 26237968 -173392182 - L1M LINE L1 -839 5307 4678 10268 209 50 11 chr5 26237969 26239083 -173391067 - L1PA15-16 LINE L1 -2294 4555 3486 2228 103 7 0 chr5 26239083 26239393 -173390757 - AluSp SINE Alu -1 312 1 10268 209 50 11 chr5 26239393 26241226 -173388924 - L1PA15-16 LINE L1 -3363 3486 3 228 216 0 0 chr5 26241270 26241321 -173388829 + (TATG)n Simple_repeat Simple_repeat 2 52 0 277 287 27 76 chr5 26241840 26242063 -173388087 - HAL1b LINE L1 -820 528 317 6679 76 23 0 chr5 26243019 26244072 -173386078 - L1PA7 LINE L1 0 6154 5093 11392 109 13 0 chr5 26244072 26245748 -173384402 + L1PA7 LINE L1 3393 5090 -1056 316 211 64 11 chr5 26245912 26246019 -173384131 - L1MA7 LINE L1 -109 6203 5982 434 110 0 66 chr5 26246028 26246119 -173384031 + L1MA7 LINE L1 6207 6291 0 182 45 91 0 chr5 26246676 26246720 -173383430 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1327 35 0 41 chr5 26246722 26246893 -173383257 - L1PA3 LINE L1 -3 6152 5989 1558 269 20 18 chr5 26247473 26247975 -173382175 + MLT1D LTR MaLR 3 505 0 1370 128 214 12 chr5 26248652 26248909 -173381241 - AluSg1 SINE Alu 0 309 1 1563 229 6 3 chr5 26248988 26249311 -173380839 - MER89-int LTR ERV1 -1034 5767 5444 718 187 15 0 chr5 26249595 26249729 -173380421 - AluSx SINE Alu 0 312 177 525 268 0 0 chr5 26249729 26249852 -173380298 - AluSx SINE Alu -190 123 1 1563 211 14 16 chr5 26251136 26251556 -173378594 + MLT2B1 LTR ERVL 1 467 -48 633 11 23 11 chr5 26251587 26251674 -173378476 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 330 131 0 33 chr5 26251678 26251739 -173378411 + MLT2B1 LTR ERVL 462 520 0 1657 165 67 20 chr5 26251990 26252395 -173377755 - Charlie1a DNA MER1_type -6 1449 1026 1700 196 24 6 chr5 26252660 26252997 -173377153 - MER61A LTR ERV1 0 343 1 3500 233 28 37 chr5 26253158 26254211 -173375939 - Charlie1a DNA MER1_type -412 1043 1 243 146 0 0 chr5 26254357 26254398 -173375752 + (TAG)n Simple_repeat Simple_repeat 1 41 0 239 324 12 81 chr5 26254518 26254691 -173375459 + LTR67 LTR ERVL 39 199 -358 1950 177 65 76 chr5 26255170 26255696 -173374454 - MLT2B1 LTR ERVL 0 520 1 2489 199 20 18 chr5 26259753 26260246 -173369904 + MER82 DNA MER2_type 1 494 -159 889 213 48 30 chr5 26260350 26260495 -173369655 - MER67C LTR ERV1 -413 297 145 1994 142 3 0 chr5 26260495 26260804 -173369346 + AluSx SINE Alu 1 310 -2 889 213 48 30 chr5 26260804 26260888 -173369262 - MER67C LTR ERV1 -565 145 64 659 131 95 0 chr5 26260912 26261049 -173369101 + L1MA9 LINE L1 6163 6312 0 444 193 0 23 chr5 26261049 26261130 -173369020 - MER67D LTR ERV1 -433 81 1 * 452 228 12 84 chr5 26261130 26261293 -173368857 + MLT2F LTR ERVL 509 659 -4 671 276 36 14 chr5 26262199 26262420 -173367730 - L1ME1 LINE L1 -5 6161 5936 240 229 16 0 chr5 26262447 26262508 -173367642 - L1ME1 LINE L1 -8 6158 6097 1629 211 30 19 chr5 26262634 26262995 -173367155 - MLT1A1 LTR MaLR 0 365 1 208 135 0 0 chr5 26263241 26263278 -173366872 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1581 220 20 37 chr5 26267431 26268001 -173362149 + MLT2B3 LTR ERVL 3 515 -39 594 93 0 0 chr5 26268001 26268087 -173362063 + (TCTA)n Simple_repeat Simple_repeat 2 87 0 1581 220 20 37 chr5 26268087 26268127 -173362023 + MLT2B3 LTR ERVL 515 554 0 383 309 73 55 chr5 26268599 26269036 -173361114 + L1M4 LINE L1 2134 2578 -3568 316 273 137 39 chr5 26269147 26269403 -173360747 + L1M4 LINE L1 2734 3014 -3132 21 57 0 0 chr5 26269657 26269692 -173360458 + AT_rich Low_complexity Low_complexity 1 35 0 673 315 103 7 chr5 26270016 26270441 -173359709 - L1ME2 LINE L1 -10 6154 5689 2229 281 97 43 chr5 26270461 26273072 -173357078 - L1ME1 LINE L1 -385 5779 3025 1198 273 99 44 chr5 26275044 26275498 -173354652 + MLT1F LTR MaLR 1 479 -63 2047 181 14 3 chr5 26275498 26275869 -173354281 + Tigger1 DNA MER2_type 1 375 -2043 710 210 41 82 chr5 26276552 26276697 -173353453 + MER6B DNA MER2_type 1 150 -715 237 65 0 0 chr5 26276697 26276728 -173353422 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1191 214 62 22 chr5 26276728 26277003 -173353147 - AluJb SINE Alu -16 286 1 710 210 41 82 chr5 26277003 26277075 -173353075 + MER6B DNA MER2_type 148 210 0 1155 240 42 0 chr5 26277177 26277485 -173352665 - L1MC3 LINE L1 -123 7662 7342 238 220 0 0 chr5 26279804 26279854 -173350296 + (TA)n Simple_repeat Simple_repeat 1 50 0 27 29 0 0 chr5 26280251 26280285 -173349865 + AT_rich Low_complexity Low_complexity 1 34 0 9800 80 7 0 chr5 26280844 26282973 -173347177 + L1PA7 LINE L1 4011 6151 -3 200 114 45 0 chr5 26283054 26283098 -173347052 + (TTAA)n Simple_repeat Simple_repeat 2 47 0 4001 204 34 18 chr5 26283149 26284284 -173345866 + L1PA16 LINE L1 4207 5377 -789 1859 165 38 22 chr5 26284284 26284653 -173345497 + THE1C LTR MaLR 1 375 0 4001 204 34 18 chr5 26284653 26285148 -173345002 + L1PA16 LINE L1 5377 5863 -303 266 317 42 42 chr5 26285257 26285377 -173344773 - L2 LINE L2 -979 2335 2216 193 107 0 0 chr5 26285402 26285430 -173344720 - L2 LINE L2 -1072 2242 2215 21 0 0 0 chr5 26286347 26286368 -173343782 + AT_rich Low_complexity Low_complexity 1 21 0 183 139 0 0 chr5 26286597 26286633 -173343517 + (GA)n Simple_repeat Simple_repeat 1 36 0 1306 205 0 60 chr5 26287697 26287995 -173342155 + AluJo SINE Alu 3 282 -30 23 33 0 0 chr5 26288821 26288851 -173341299 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr5 26288883 26288930 -173341220 + AT_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr5 26289197 26289223 -173340927 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 26289345 26289367 -173340783 + AT_rich Low_complexity Low_complexity 1 22 0 764 250 71 5 chr5 26289573 26289675 -173340475 - MER58A DNA MER1_type -2211 209 115 405 0 0 0 chr5 26289675 26289720 -173340430 + (TC)n Simple_repeat Simple_repeat 2 46 0 357 24 0 0 chr5 26289719 26289761 -173340389 + (TA)n Simple_repeat Simple_repeat 1 42 0 * 764 250 71 5 chr5 26289720 26289854 -173340296 - MER58A DNA MER1_type -2305 115 1 191 111 0 28 chr5 26290848 26290884 -173339266 + (TTC)n Simple_repeat Simple_repeat 2 36 0 731 199 0 8 chr5 26291230 26291361 -173338789 + FLAM_C SINE Alu 1 130 -13 359 364 48 24 chr5 26292117 26292408 -173337742 - HAL1 LINE L1 -700 1807 1510 393 251 97 75 chr5 26292529 26293024 -173337126 - HAL1 LINE L1 -1192 1315 810 278 397 21 7 chr5 26293097 26293238 -173336912 - HAL1 LINE L1 -1832 675 533 311 371 52 62 chr5 26293313 26293736 -173336414 - HAL1 LINE L1 -2046 461 42 2474 130 3 8 chr5 26293736 26294113 -173336037 - THE1C LTR MaLR 0 375 1 311 371 52 62 chr5 26294113 26294155 -173335995 - HAL1 LINE L1 -2465 42 1 1153 234 19 19 chr5 26294410 26294671 -173335479 - MLT1A1 LTR MaLR 0 365 105 1561 211 61 125 chr5 26294687 26295124 -173335026 + MER77 LTR ERV1 24 411 -194 1419 246 28 14 chr5 26295124 26295481 -173334669 - MLT1A1 LTR MaLR 0 365 4 1561 211 61 125 chr5 26295481 26295665 -173334485 + MER77 LTR ERV1 411 605 0 248 256 0 13 chr5 26295686 26295711 -173334439 + (TA)n Simple_repeat Simple_repeat 1 25 -52 536 113 0 0 chr5 26295711 26295791 -173334359 - MADE1 DNA Mariner 0 80 1 248 256 0 13 chr5 26295791 26295843 -173334307 + (TA)n Simple_repeat Simple_repeat 25 77 0 652 130 0 0 chr5 26295930 26296030 -173334120 + HY3 scRNA scRNA 2 101 0 774 299 38 31 chr5 26296084 26296605 -173333545 - L1M4 LINE L1 -979 5561 5037 312 289 22 0 chr5 26296629 26296719 -173333431 - L1M4 LINE L1 -1665 4875 4784 2001 106 3 61 chr5 26296757 26297068 -173333082 - AluSx SINE Alu -19 293 1 942 145 32 59 chr5 26297077 26297298 -173332852 - L1MD1 LINE L1 0 6242 6028 1185 254 61 20 chr5 26297299 26297759 -173332391 - L1MDa LINE L1 -3288 3252 2774 186 189 0 0 chr5 26297844 26297881 -173332269 + (TA)n Simple_repeat Simple_repeat 2 38 0 525 224 125 2 chr5 26297887 26298162 -173331988 - L1MDa LINE L1 -3784 2756 2449 22 0 0 0 chr5 26298973 26298995 -173331155 + AT_rich Low_complexity Low_complexity 1 22 0 663 81 0 0 chr5 26299028 26299127 -173331023 + (GAA)n Simple_repeat Simple_repeat 2 100 0 23 0 0 0 chr5 26299543 26299566 -173330584 + AT_rich Low_complexity Low_complexity 1 23 0 648 304 22 0 chr5 26299906 26300090 -173330060 + MER5A DNA MER1_type 1 188 -1 430 318 47 6 chr5 26300723 26300893 -173329257 + MIR SINE MIR 20 196 -66 348 298 48 0 chr5 26301323 26301427 -173328723 - MIR SINE MIR -122 140 32 191 296 182 11 chr5 26302487 26302575 -173327575 + MIR3 SINE MIR 6 108 -100 878 255 81 26 chr5 26303322 26303467 -173326683 - MER21B LTR ERV1 -127 736 600 405 0 0 0 chr5 26303467 26303512 -173326638 + (CA)n Simple_repeat Simple_repeat 2 46 0 878 255 81 26 chr5 26303512 26303637 -173326513 - MER21B LTR ERV1 -263 600 451 21 36 0 0 chr5 26303672 26303700 -173326450 + AT_rich Low_complexity Low_complexity 1 28 0 181 320 90 16 chr5 26304991 26305113 -173325037 + L2 LINE L2 2210 2340 -974 745 299 55 13 chr5 26305390 26305587 -173324563 + L1MC4a LINE L1 5542 5729 -2079 3418 65 0 7 chr5 26305587 26306036 -173324114 - L1PA5 LINE L1 -13 6141 5696 745 299 55 13 chr5 26306036 26306219 -173323931 + L1MC4a LINE L1 5729 5938 -1870 360 0 0 0 chr5 26306249 26306289 -173323861 + (TG)n Simple_repeat Simple_repeat 2 41 0 1376 196 28 25 chr5 26306290 26306576 -173323574 + AluJo SINE Alu 17 303 -9 411 123 0 0 chr5 26306580 26306661 -173323489 + (GAA)n Simple_repeat Simple_repeat 2 82 0 26 0 0 0 chr5 26308034 26308060 -173322090 + AT_rich Low_complexity Low_complexity 1 26 0 2234 114 0 0 chr5 26308126 26308425 -173321725 - AluSx SINE Alu -9 303 5 22 35 0 0 chr5 26309715 26309744 -173320406 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 26309924 26309947 -173320203 + AT_rich Low_complexity Low_complexity 1 23 0 651 235 24 18 chr5 26309979 26310145 -173320005 + MLT1B LTR MaLR 2 168 -206 1005 56 0 0 chr5 26310145 26310271 -173319879 - L1PA8 LINE L1 -316 5856 5731 1035 72 7 26 chr5 26310271 26310422 -173319728 + L1PA8 LINE L1 6019 6168 -4 2384 43 0 3 chr5 26310429 26310764 -173319386 + AluY SINE Alu 1 334 0 818 256 20 10 chr5 26310839 26311038 -173319112 + MLT1B LTR MaLR 190 390 0 198 192 0 0 chr5 26311045 26311097 -173319053 + (TA)n Simple_repeat Simple_repeat 2 53 0 22 0 0 0 chr5 26311220 26311242 -173318908 + AT_rich Low_complexity Low_complexity 1 22 0 38 0 0 0 chr5 26311620 26311658 -173318492 + AT_rich Low_complexity Low_complexity 1 38 0 214 291 0 0 chr5 26312056 26312111 -173318039 + MIR SINE MIR 63 117 -145 24 85 0 0 chr5 26312174 26312233 -173317917 + AT_rich Low_complexity Low_complexity 1 59 0 1379 214 45 60 chr5 26312331 26312733 -173317417 + MSTD LTR MaLR 1 396 0 230 179 0 45 chr5 26313441 26313508 -173316642 - LTR66 LTR ERVL -149 461 398 463 283 66 15 chr5 26313542 26313740 -173316410 + LTR33 LTR ERVL 8 215 -306 274 302 123 0 chr5 26313776 26313882 -173316268 + LTR33 LTR ERVL 272 390 -131 605 219 4 122 chr5 26313882 26314119 -173316031 - MER63A DNA MER1_type 0 210 2 216 0 0 0 chr5 26314938 26314962 -173315188 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 449 366 25 15 chr5 26316069 26316311 -173313839 + ERVL LTR ERVL 1910 2209 -2835 3707 145 68 20 chr5 26316813 26317524 -173312626 - Tigger3(Golem) DNA MER2_type 0 3029 2285 2451 75 0 0 chr5 26317534 26317841 -173312309 + AluY SINE Alu 1 307 -4 552 210 0 0 chr5 26317846 26317946 -173312204 - Tigger3(Golem) DNA MER2_type -2929 100 1 39 22 0 0 chr5 26318489 26318535 -173311615 + AT_rich Low_complexity Low_complexity 1 46 0 380 324 27 0 chr5 26319393 26319541 -173310609 + MER104 DNA Tc2 1 152 -28 1266 151 55 0 chr5 26319983 26320201 -173309949 - MER30 DNA MER1_type 0 230 1 261 146 0 0 chr5 26321038 26321086 -173309064 + (TA)n Simple_repeat Simple_repeat 1 48 0 204 40 0 0 chr5 26321102 26321127 -173309023 + (GA)n Simple_repeat Simple_repeat 1 25 0 387 309 18 36 chr5 26321557 26321777 -173308373 + HAL1b LINE L1 231 446 -902 41 36 0 0 chr5 26322675 26322730 -173307420 + AT_rich Low_complexity Low_complexity 1 55 0 1307 229 26 23 chr5 26322730 26323032 -173307118 - AluJo SINE Alu -7 305 3 309 327 84 40 chr5 26323492 26323789 -173306361 - L2 LINE L2 -1 3312 3003 292 341 47 8 chr5 26323871 26324000 -173306150 - L2 LINE L2 -448 2866 2733 337 253 21 0 chr5 26324457 26324552 -173305598 + MER58 DNA MER1_type 2302 2398 -22 260 385 107 6 chr5 26324663 26324990 -173305160 - L2 LINE L2 -683 2631 2272 209 184 41 0 chr5 26325043 26325092 -173305058 + T-rich Low_complexity Low_complexity 1 51 0 2144 121 0 31 chr5 26325817 26326139 -173304011 + AluSx SINE Alu 1 312 0 1635 100 4 0 chr5 26326949 26327178 -173302972 + MER30 DNA MER1_type 1 230 0 21 0 0 0 chr5 26327515 26327536 -173302614 + AT_rich Low_complexity Low_complexity 1 21 0 398 288 9 9 chr5 26328587 26328698 -173301452 + HAL1b LINE L1 335 445 -903 385 280 136 23 chr5 26329010 26329407 -173300743 + HAL1b LINE L1 852 1293 -55 1600 158 18 0 chr5 26329942 26330226 -173299924 - AluSx SINE Alu 0 312 24 20352 53 5 2 chr5 26330326 26332963 -173297187 - L1P LINE L1 -1871 4275 1631 7353 39 1 1 chr5 26332964 26334540 -173295610 + L1PA5 LINE L1 4570 6146 -8 793 169 26 32 chr5 26334633 26334787 -173295363 - MSTA LTR MaLR -58 370 218 1742 281 40 12 chr5 26335128 26335780 -173294370 - L1MC4 LINE L1 -479 7563 6894 318 263 88 9 chr5 26335775 26335889 -173294261 + L1MC4 LINE L1 7547 7669 -373 * 762 264 104 22 chr5 26335931 26336333 -173293817 + L1MC4 LINE L1 7605 8039 -3 185 143 0 41 chr5 26336548 26336597 -173293553 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 291 100 29 0 chr5 26337275 26337344 -173292806 - L1PA6 LINE L1 -3 6151 6078 400 321 33 72 chr5 26338934 26339323 -173290827 + HAL1b LINE L1 62 435 -913 21 0 0 0 chr5 26339521 26339542 -173290608 + AT_rich Low_complexity Low_complexity 1 21 0 250 329 92 0 chr5 26339773 26339925 -173290225 - L1MC4 LINE L1 -2337 5471 5306 189 0 0 0 chr5 26340190 26340211 -173289939 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 535 174 107 40 chr5 26340382 26340531 -173289619 + MER76 LTR ERV 12 170 -518 25 0 0 0 chr5 26341045 26341070 -173289080 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr5 26341519 26341552 -173288598 + AT_rich Low_complexity Low_complexity 1 33 0 5200 169 19 28 chr5 26341552 26341831 -173288319 + L1MA4A LINE L1 5105 5385 -918 297 0 0 0 chr5 26341831 26341864 -173288286 + (TG)n Simple_repeat Simple_repeat 2 34 0 2107 128 3 0 chr5 26341872 26342169 -173287981 - AluSx SINE Alu -14 298 1 5200 169 19 28 chr5 26342169 26343084 -173287066 + L1MA4A LINE L1 5392 6298 -5 1902 148 0 7 chr5 26343269 26343572 -173286578 - AluSx SINE Alu -11 301 1 412 171 40 0 chr5 26343600 26343676 -173286474 + AluS SINE Alu 1 79 -223 820 271 21 25 chr5 26343836 26344076 -173286074 - MER8 DNA MER2_type 0 239 1 1857 159 52 0 chr5 26344121 26344430 -173285720 + MER7A DNA MER2_type 21 343 -3 934 197 44 19 chr5 26344441 26344695 -173285455 + L1MC4 LINE L1 6774 7021 -787 473 266 105 25 chr5 26344683 26345021 -173285129 + L1MC4 LINE L1 7330 7577 -231 * 990 265 82 16 chr5 26345021 26345387 -173284763 - MLT1B LTR MaLR 0 390 1 473 266 105 25 chr5 26345387 26345536 -173284614 + L1MC4 LINE L1 7577 7713 -95 195 100 0 0 chr5 26345586 26345616 -173284534 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 542 270 212 17 chr5 26345616 26345961 -173284189 + L1MC4 LINE L1 7488 7899 -143 38 81 0 0 chr5 26346018 26346105 -173284045 + AT_rich Low_complexity Low_complexity 1 87 0 332 358 56 39 chr5 26346247 26346479 -173283671 + L1ME LINE L1 5385 5620 -501 3199 161 17 9 chr5 26346739 26347361 -173282789 + MER4D LTR ERV1 266 872 0 432 0 0 0 chr5 26347835 26347883 -173282267 + (TA)n Simple_repeat Simple_repeat 2 49 0 2177 110 0 3 chr5 26347981 26348282 -173281868 - AluSg SINE Alu -10 300 1 1249 166 3 90 chr5 26348362 26348652 -173281498 + L1MA10 LINE L1 6027 6291 -43 550 352 82 40 chr5 26348958 26349555 -173280595 + MLT2F LTR ERVL 8 629 -34 355 271 60 108 chr5 26349655 26350054 -173280096 - L1MEd LINE L1 -4900 1219 840 24 0 0 0 chr5 26350223 26350247 -173279903 + AT_rich Low_complexity Low_complexity 1 24 0 1999 121 3 17 chr5 26350530 26350828 -173279322 - AluSq SINE Alu -19 294 1 370 242 44 11 chr5 26351136 26351227 -173278923 - MER58C DNA MER1_type -3 212 119 23 0 0 0 chr5 26352047 26352070 -173278080 + AT_rich Low_complexity Low_complexity 1 23 0 258 320 30 44 chr5 26352334 26352537 -173277613 + L1ME LINE L1 5536 5735 -386 1830 137 3 44 chr5 26353047 26353368 -173276782 - AluSx SINE Alu -4 308 1 23 33 0 0 chr5 26353546 26353576 -173276574 + AT_rich Low_complexity Low_complexity 1 30 0 1788 115 0 4 chr5 26353975 26354227 -173275923 + AluSq SINE Alu 3 253 -60 312 260 10 0 chr5 26354327 26354423 -173275727 + (TA)n Simple_repeat Simple_repeat 2 98 0 216 0 0 0 chr5 26354439 26354463 -173275687 + (CA)n Simple_repeat Simple_repeat 2 25 0 387 0 0 0 chr5 26354492 26354535 -173275615 + (CA)n Simple_repeat Simple_repeat 2 44 0 202 171 0 49 chr5 26355722 26355763 -173274387 + polypyrimidine Low_complexity Low_complexity 1 39 0 6177 235 45 40 chr5 26355994 26357545 -173272605 - MER89-int LTR ERV1 -270 6531 4970 2747 123 34 5 chr5 26357545 26357960 -173272190 - MSTA LTR MaLR -1 427 1 6177 235 45 40 chr5 26357960 26358040 -173272110 - MER89-int LTR ERV1 -1831 4970 4892 640 306 118 8 chr5 26358101 26358356 -173271794 - MER89-int LTR ERV1 -3866 2935 2653 * 956 244 41 69 chr5 26358328 26358718 -173271432 - MER89-int LTR ERV1 -5546 1255 877 585 242 35 135 chr5 26358934 26359194 -173270956 - MER89-int LTR ERV1 -6088 713 480 2118 216 80 11 chr5 26359194 26359658 -173270492 + MLT1D LTR MaLR 1 496 -9 27 29 0 0 chr5 26361050 26361084 -173269066 + AT_rich Low_complexity Low_complexity 1 34 0 2204 165 24 21 chr5 26361247 26361665 -173268485 + MSTA LTR MaLR 6 424 -4 827 233 17 0 chr5 26361670 26361846 -173268304 + MER58A DNA MER1_type 46 224 0 25 31 0 0 chr5 26363439 26363471 -173266679 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 26363541 26363562 -173266588 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 26363725 26363750 -173266400 + AT_rich Low_complexity Low_complexity 1 25 0 293 95 0 0 chr5 26364160 26364202 -173265948 + MLT2A1 LTR ERVL 390 431 -13 292 127 0 28 chr5 26364202 26364273 -173265877 + (TA)n Simple_repeat Simple_repeat 2 70 0 2135 122 40 92 chr5 26364308 26364734 -173265416 - MLT2A1 LTR ERVL -40 404 1 2065 213 12 2 chr5 26364734 26365143 -173265007 + MLT2C2 LTR ERVL 4 416 -48 1344 203 30 8 chr5 26365477 26365743 -173264407 - MLT1A1 LTR MaLR -80 285 14 260 210 113 0 chr5 26365755 26365817 -173264333 + Charlie1 DNA MER1_type 2675 2743 -18 220 410 50 3 chr5 26365879 26366162 -173263988 - L3 LINE CR1 -108 1469 1174 22 35 0 0 chr5 26366440 26366469 -173263681 + AT_rich Low_complexity Low_complexity 1 29 0 746 104 0 0 chr5 26366566 26366704 -173263446 - AluY SINE Alu 0 317 180 24 0 0 0 chr5 26366814 26366838 -173263312 + AT_rich Low_complexity Low_complexity 1 24 0 1930 244 84 36 chr5 26366859 26368835 -173261315 - L1MB7 LINE L1 -18 6166 3999 851 86 86 0 chr5 26368835 26368963 -173261187 + MER85 DNA T2_type 1 139 0 1930 244 84 36 chr5 26368963 26369420 -173260730 - L1MB7 LINE L1 -2185 3999 3565 1303 270 69 18 chr5 26369420 26370097 -173260053 - L1M4 LINE L1 -2354 3792 3081 * 2912 249 55 79 chr5 26370091 26370117 -173260033 - L1MC/D LINE L1 -743 5403 5378 200 35 35 0 chr5 26370117 26370146 -173260004 + (TTA)n Simple_repeat Simple_repeat 3 32 0 2912 249 55 79 chr5 26370146 26370621 -173259529 - L1MC/D LINE L1 -768 5378 4893 9490 85 15 1 chr5 26370621 26372719 -173257431 - L1PA7 LINE L1 -4 6150 4031 2912 249 55 79 chr5 26372719 26373134 -173257016 - L1MC/D LINE L1 -1253 4893 4470 2090 90 0 52 chr5 26373134 26373444 -173256706 + AluSg SINE Alu 1 294 -16 2912 249 55 79 chr5 26373444 26374361 -173255789 - L1MC/D LINE L1 -1676 4470 3726 1215 256 75 35 chr5 26374366 26375254 -173254896 - L1ME1 LINE L1 -272 5894 4964 23 54 0 0 chr5 26376444 26376481 -173253669 + AT_rich Low_complexity Low_complexity 1 37 0 2044 132 10 0 chr5 26378802 26379106 -173251044 - AluSx SINE Alu -2 310 4 280 340 40 10 chr5 26379977 26380077 -173250073 - L2 LINE L2 -7 3306 3204 537 257 80 5 chr5 26381022 26381209 -173248941 - MER67D LTR ERV1 -8 506 306 1187 176 59 99 chr5 26381253 26381577 -173248573 - MER67D LTR ERV1 -203 311 1 711 151 120 0 chr5 26382294 26382466 -173247684 - L1MA9 LINE L1 -9 6303 6112 7308 45 1 0 chr5 26382491 26384071 -173246079 - L1PA5 LINE L1 -3 6151 4570 22427 52 9 2 chr5 26384072 26386972 -173243178 + L1PA5 LINE L1 1631 4551 -1595 1417 188 71 8 chr5 26387012 26387278 -173242872 - AluJb SINE Alu -16 296 14 280 239 0 0 chr5 26387278 26387324 -173242826 - AluJ/monomer SINE Alu -254 46 1 1392 224 41 0 chr5 26387332 26387626 -173242524 - AluJo SINE Alu -6 306 1 26 0 0 0 chr5 26387665 26387691 -173242459 + AT_rich Low_complexity Low_complexity 1 26 0 243 322 112 34 chr5 26387962 26388167 -173241983 + L3 LINE CR1 888 1108 -469 552 316 116 12 chr5 26389234 26389554 -173240596 - MLT1K LTR MaLR -24 564 212 277 247 43 21 chr5 26389556 26389649 -173240501 - MLT1I LTR MaLR -8 401 307 1048 124 5 54 chr5 26390407 26390593 -173239557 + AluSg/x SINE Alu 135 311 -1 481 275 127 16 chr5 26391802 26392180 -173237970 + L1MC5 LINE L1 7327 7746 -215 240 279 62 0 chr5 26393379 26393508 -173236642 - L1ME LINE L1 -272 5849 5713 447 336 66 23 chr5 26393579 26393972 -173236178 + MLT1J1 LTR MaLR 7 416 -30 3091 221 61 29 chr5 26393982 26395836 -173234314 - L1MA9 LINE L1 -4 6330 4542 * 3342 242 15 7 chr5 26395821 26396686 -173233464 + L1 LINE L1 3304 4175 -1971 12052 217 23 77 chr5 26396723 26397094 -173233056 + L1PA15 LINE L1 1323 1712 -5104 1543 201 27 0 chr5 26397094 26397387 -173232763 - AluJb SINE Alu -11 301 1 12052 217 23 77 chr5 26397387 26397569 -173232581 + L1PA15 LINE L1 1712 1902 -4914 1953 142 23 7 chr5 26397569 26397872 -173232278 + AluSq SINE Alu 1 308 -5 12052 217 23 77 chr5 26397872 26401481 -173228669 + L1PA15 LINE L1 1902 5063 -1753 522 100 0 12 chr5 26401481 26401561 -173228589 + MADE1 DNA Mariner 2 80 0 12052 217 23 77 chr5 26401561 26403227 -173226923 + L1PA15 LINE L1 5063 6816 0 1352 189 41 43 chr5 26403286 26403678 -173226472 + L1 LINE L1 4152 4542 -1604 296 386 38 5 chr5 26404739 26404923 -173225227 - LTR33 LTR ERVL -313 208 19 704 233 85 17 chr5 26406763 26406939 -173223211 - MLT1B LTR MaLR -3 387 200 244 206 24 67 chr5 26407283 26407448 -173222702 + (TTATA)n Simple_repeat Simple_repeat 1 158 0 29 0 0 0 chr5 26407591 26407620 -173222530 + AT_rich Low_complexity Low_complexity 1 29 0 225 65 0 0 chr5 26407846 26407877 -173222273 + (TG)n Simple_repeat Simple_repeat 2 32 0 279 289 22 0 chr5 26407877 26407967 -173222183 + (TA)n Simple_repeat Simple_repeat 2 93 0 230 167 26 77 chr5 26408027 26408105 -173222045 - HsTC2 DNA Tc2 -104 1794 1721 22 56 0 0 chr5 26408139 26408175 -173221975 + AT_rich Low_complexity Low_complexity 1 36 0 6787 68 0 8 chr5 26408706 26409834 -173220316 - L1PA7 LINE L1 0 6154 5040 291 234 28 28 chr5 26409834 26409941 -173220209 + MER90 LTR ERV1 365 471 -104 532 174 146 56 chr5 26409947 26410091 -173220059 - MER39 LTR ERV1 -2 682 384 669 238 24 30 chr5 26410102 26410270 -173219880 - MER39 LTR ERV1 -201 506 340 452 252 94 16 chr5 26410392 26410519 -173219631 - MER39 LTR ERV1 -569 138 2 38 0 0 0 chr5 26410636 26410674 -173219476 + AT_rich Low_complexity Low_complexity 1 38 0 273 148 37 0 chr5 26411093 26411147 -173219003 + L1MC4 LINE L1 6648 6703 -1339 252 86 0 0 chr5 26411147 26411182 -173218968 + (TA)n Simple_repeat Simple_repeat 1 35 0 272 351 80 66 chr5 26411478 26411828 -173218322 + L2 LINE L2 2918 3272 0 490 295 52 6 chr5 26413084 26413257 -173216893 - MIR SINE MIR -14 248 68 1157 235 40 52 chr5 26413511 26413933 -173216217 - LTR56 LTR ERV1 -20 425 9 378 211 29 44 chr5 26414196 26414427 -173215723 - HERVS71 LTR ERV1 -840 5918 4646 2522 40 3 3 chr5 26415354 26415653 -173214497 + AluY SINE Alu 6 304 -7 2508 116 6 6 chr5 26416530 26416893 -173213257 - THE1B LTR MaLR 0 364 2 2079 86 7 0 chr5 26417504 26417808 -173212342 - L1P LINE L1 -860 5286 4981 3045 62 25 2 chr5 26417808 26418212 -173211938 + L1PA7 LINE L1 5730 6144 -10 1650 199 68 27 chr5 26418544 26418771 -173211379 - MSTB1 LTR MaLR 0 432 179 180 0 0 0 chr5 26418771 26418791 -173211359 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1650 199 68 27 chr5 26418791 26418976 -173211174 - MSTB1 LTR MaLR -253 179 3 284 269 65 11 chr5 26419085 26419178 -173210972 - HERVS71 LTR ERV1 -3390 5588 5491 728 224 13 70 chr5 26419431 26419659 -173210491 + L1P LINE L1 4605 4819 -1327 6154 102 20 0 chr5 26419671 26421107 -173209043 + L1PA11 LINE L1 4719 6172 -2 23 0 0 0 chr5 26422247 26422270 -173207880 + AT_rich Low_complexity Low_complexity 1 23 0 8599 116 23 2 chr5 26422504 26423761 -173206389 + HSMAR1 DNA Mariner 5 1287 0 1027 226 128 0 chr5 26424038 26424264 -173205886 - AluJo SINE Alu -56 256 2 207 0 0 0 chr5 26425984 26426007 -173204143 + (A)n Simple_repeat Simple_repeat 1 23 0 883 218 53 57 chr5 26426644 26427054 -173203096 - LTR56 LTR ERV1 0 437 44 190 317 161 41 chr5 26427954 26428345 -173201805 - L2 LINE L2 -791 2523 2086 413 291 55 12 chr5 26428406 26428571 -173201579 - LTR33A LTR ERVL -5 518 347 234 329 0 0 chr5 26429409 26429482 -173200668 - LTR16A1 LTR ERVL -11 446 374 1695 224 35 69 chr5 26430829 26430961 -173199189 - MLT1C LTR MaLR -2 465 330 2457 68 3 0 chr5 26430961 26431271 -173198879 - AluY SINE Alu 0 311 1 1695 224 35 69 chr5 26431271 26431619 -173198531 - MLT1C LTR MaLR -137 330 1 207 167 0 0 chr5 26431654 26431690 -173198460 + (TG)n Simple_repeat Simple_repeat 1 36 0 465 362 76 20 chr5 26431815 26432308 -173197842 - HERVL LTR ERVL -1900 3096 2806 27 0 0 0 chr5 26432502 26432529 -173197621 + AT_rich Low_complexity Low_complexity 1 27 0 227 37 0 0 chr5 26432792 26432819 -173197331 + L1MA1 LINE L1 6232 6258 -44 298 261 49 44 chr5 26433060 26433216 -173196934 - HERVL LTR ERVL -4083 1681 1484 233 280 108 11 chr5 26433312 26433405 -173196745 - MLT1G1 LTR MaLR -18 577 476 1956 127 0 3 chr5 26434363 26434808 -173195342 + AluY SINE Alu 1 444 0 732 151 96 36 chr5 26435174 26435340 -173194810 + MER96B DNA MER1_type? 4 179 -238 3928 176 32 7 chr5 26436789 26438084 -173192066 - L1PA15 LINE L1 -181 6635 5313 4113 249 40 31 chr5 26438152 26439396 -173190754 - L1PA15 LINE L1 -4509 2278 564 1787 198 110 0 chr5 26439470 26439853 -173190297 + MSTB1 LTR MaLR 5 429 -3 194 361 167 27 chr5 26439856 26440294 -173189856 + L2 LINE L2 926 1424 -1890 270 236 11 34 chr5 26441265 26441354 -173188796 + L1ME4a LINE L1 5970 6056 -65 3870 176 89 50 chr5 26441400 26442357 -173187793 - L1MA9 LINE L1 -30 6282 5289 637 239 15 20 chr5 26442360 26442557 -173187593 + L1MA9 LINE L1 5096 5291 -855 1860 79 35 28 chr5 26442719 26443009 -173187141 - AluY SINE Alu -19 292 1 1916 180 16 0 chr5 26443017 26443394 -173186756 - L1MB1 LINE L1 -5 6163 5781 25 0 0 0 chr5 26443846 26443871 -173186279 + AT_rich Low_complexity Low_complexity 1 25 0 2454 54 0 0 chr5 26443934 26444229 -173185921 - AluY SINE Alu -5 306 12 243 287 10 30 chr5 26444511 26444612 -173185538 + (TATATG)n Simple_repeat Simple_repeat 2 100 0 38 51 0 0 chr5 26444741 26444800 -173185350 + AT_rich Low_complexity Low_complexity 1 59 0 26 93 0 0 chr5 26445033 26445108 -173185042 + AT_rich Low_complexity Low_complexity 1 75 0 22 35 0 0 chr5 26445407 26445436 -173184714 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 26445497 26445521 -173184629 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr5 26445562 26445600 -173184550 + AT_rich Low_complexity Low_complexity 1 38 0 214 270 0 0 chr5 26446975 26447038 -173183112 + T-rich Low_complexity Low_complexity 1 63 0 230 95 0 24 chr5 26447156 26447198 -173182952 + Alu SINE Alu 241 281 -20 1418 185 22 25 chr5 26447298 26447574 -173182576 + AluJb SINE Alu 38 312 0 9976 164 48 3 chr5 26447733 26448340 -173181810 + Tigger1 DNA MER2_type 1 579 -1839 1885 86 4 0 chr5 26448340 26448584 -173181566 + AluY SINE Alu 51 295 -16 9976 164 48 3 chr5 26448584 26449788 -173180362 + Tigger1 DNA MER2_type 579 1893 -525 6070 64 232 72 chr5 26449789 26450880 -173179270 - MER11A LTR ERVK 0 1266 1 2596 183 27 9 chr5 26450880 26451401 -173178749 + Tigger1 DNA MER2_type 1889 2418 0 1384 328 64 19 chr5 26452048 26452561 -173177589 + L1M4b LINE L1 182 717 -6142 1187 241 13 77 chr5 26452564 26452954 -173177196 + MLT1A2 LTR MaLR 4 368 -6 3286 259 66 24 chr5 26452960 26454637 -173175513 + L1M4b LINE L1 713 2493 -4464 1016 209 27 128 chr5 26454676 26455082 -173175068 - MLT1A1 LTR MaLR 0 365 1 1183 290 36 32 chr5 26455157 26456198 -173173952 + L1M4b LINE L1 2469 3467 -3490 494 310 70 20 chr5 26456271 26456574 -173173576 - L1ME LINE L1 -4999 1071 751 23 0 0 0 chr5 26456630 26456653 -173173497 + AT_rich Low_complexity Low_complexity 1 23 0 212 211 19 19 chr5 26457128 26457180 -173172970 + (TATG)n Simple_repeat Simple_repeat 4 55 0 369 0 0 0 chr5 26457511 26457552 -173172598 + (CA)n Simple_repeat Simple_repeat 2 42 0 28 0 0 0 chr5 26458321 26458349 -173171801 + AT_rich Low_complexity Low_complexity 1 28 0 969 244 103 53 chr5 26458742 26459082 -173171068 + MER57A LTR ERV1 47 403 0 729 280 55 21 chr5 26459085 26459321 -173170829 + MER57A-int LTR ERV1 3 246 -7291 21 36 0 0 chr5 26459939 26459967 -173170183 + AT_rich Low_complexity Low_complexity 1 28 0 202 152 0 0 chr5 26460151 26460165 -173169985 + (CAAA)n Simple_repeat Simple_repeat 2 15 -19 1921 167 0 3 chr5 26460165 26460476 -173169674 + AluSx SINE Alu 1 310 -2 202 152 0 0 chr5 26460476 26460494 -173169656 + (CAAA)n Simple_repeat Simple_repeat 14 34 0 973 222 125 27 chr5 26460543 26460872 -173169278 + MER57A-int LTR ERV1 1066 1426 -3510 1908 158 0 3 chr5 26460880 26461165 -173168985 + AluSx SINE Alu 4 287 -25 657 144 10 0 chr5 26461358 26461462 -173168688 + MER34 LTR ERV1 133 237 -305 360 219 0 0 chr5 26461462 26461526 -173168624 + MER34 LTR ERV1 476 539 -3 1544 328 25 28 chr5 26461783 26462503 -173167647 + MER57-int LTR ERV1 6253 6970 -567 862 182 158 111 chr5 26462727 26463068 -173167082 + MER57A LTR ERV1 45 401 -2 241 152 0 0 chr5 26463777 26463823 -173166327 - LTR66 LTR ERVL -171 439 394 611 231 86 27 chr5 26464477 26464663 -173165487 - MER105 DNA DNA -2 202 6 22 0 0 0 chr5 26465213 26465235 -173164915 + AT_rich Low_complexity Low_complexity 1 22 0 190 364 26 0 chr5 26465271 26465348 -173164802 + MIR SINE MIR 74 152 -110 21 36 0 0 chr5 26466913 26466941 -173163209 + AT_rich Low_complexity Low_complexity 1 28 0 32 26 0 0 chr5 26467024 26467063 -173163087 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr5 26469755 26469778 -173160372 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 26470118 26470139 -173160011 + AT_rich Low_complexity Low_complexity 1 21 0 243 234 130 0 chr5 26470563 26470640 -173159510 + L1MC/D LINE L1 5728 5814 -1994 22 35 0 0 chr5 26471022 26471051 -173159099 + AT_rich Low_complexity Low_complexity 1 29 0 186 133 0 0 chr5 26471504 26471534 -173158616 + (TG)n Simple_repeat Simple_repeat 1 30 0 201 121 0 0 chr5 26471877 26471910 -173158240 + (CA)n Simple_repeat Simple_repeat 2 34 0 358 309 0 0 chr5 26473922 26474006 -173156144 + MLT1E LTR MaLR 324 407 -186 1139 234 53 30 chr5 26474387 26474780 -173155370 - LTR52 LTR ERVL -19 402 1 535 324 48 20 chr5 26474902 26475152 -173154998 - MLT1H LTR MaLR -292 257 1 22 35 0 0 chr5 26475935 26475964 -173154186 + AT_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr5 26476156 26476195 -173153955 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr5 26476975 26476997 -173153153 + AT_rich Low_complexity Low_complexity 1 22 0 1359 229 104 69 chr5 26477307 26477842 -173152308 + Charlie1 DNA MER1_type 47 609 -2152 1280 238 13 17 chr5 26477842 26478127 -173152023 + AluJo SINE Alu 1 287 -15 202 39 0 0 chr5 26478127 26478153 -173151997 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1280 238 13 17 chr5 26478153 26478169 -173151981 + AluJo SINE Alu 287 302 0 1359 229 104 69 chr5 26478169 26478258 -173151892 + Charlie1 DNA MER1_type 609 693 -2068 291 182 80 34 chr5 26478261 26478349 -173151801 + Charlie1 DNA MER1_type 921 1012 -1749 1109 221 130 109 chr5 26478365 26478881 -173151269 + Charlie1 DNA MER1_type 1622 2126 -635 2278 62 0 3 chr5 26478881 26479171 -173150979 + AluY SINE Alu 1 289 -22 1109 221 130 109 chr5 26479171 26479440 -173150710 + Charlie1 DNA MER1_type 2126 2388 -373 1778 136 38 14 chr5 26479440 26479727 -173150423 - AluSx SINE Alu -6 306 13 1109 221 130 109 chr5 26479727 26479813 -173150337 + Charlie1 DNA MER1_type 2388 2471 -290 1938 138 37 0 chr5 26479813 26480110 -173150040 - AluSx SINE Alu -4 308 1 1109 221 130 109 chr5 26480110 26480274 -173149876 + Charlie1 DNA MER1_type 2471 2681 -80 560 68 11 23 chr5 26480274 26480362 -173149788 - L1MA3 LINE L1 -13 6292 6206 26 30 0 0 chr5 26480373 26480406 -173149744 + AT_rich Low_complexity Low_complexity 1 33 0 314 156 104 65 chr5 26480729 26480806 -173149344 - Charlie1 DNA MER1_type 0 2761 2682 5130 173 23 8 chr5 26480807 26482652 -173147498 - L1MA3 LINE L1 -156 6149 4273 24 32 0 0 chr5 26482698 26482729 -173147421 + AT_rich Low_complexity Low_complexity 1 31 0 42565 36 21 1 chr5 26483580 26489612 -173140538 - L1PA3 LINE L1 0 6155 2 24 0 0 0 chr5 26490033 26490057 -173140093 + AT_rich Low_complexity Low_complexity 1 24 0 311 171 29 0 chr5 26491793 26491863 -173138287 + (TATG)n Simple_repeat Simple_repeat 4 75 0 1927 154 148 13 chr5 26492615 26492992 -173137158 + MSTA LTR MaLR 1 428 0 26 50 0 0 chr5 26493392 26493432 -173136718 + AT_rich Low_complexity Low_complexity 1 40 0 206 265 0 0 chr5 26493485 26493534 -173136616 + (TA)n Simple_repeat Simple_repeat 2 50 0 210 208 0 0 chr5 26494109 26494157 -173135993 + CT-rich Low_complexity Low_complexity 5 52 0 1904 131 45 0 chr5 26494659 26494778 -173135372 + AluSq SINE Alu 1 113 -200 887 0 0 10 chr5 26494778 26494882 -173135268 + (TAAAA)n Simple_repeat Simple_repeat 2 104 0 1904 131 45 0 chr5 26494882 26495053 -173135097 + AluSq SINE Alu 113 304 -9 22 0 0 0 chr5 26495097 26495119 -173135031 + AT_rich Low_complexity Low_complexity 1 22 0 245 273 42 79 chr5 26495285 26495450 -173134700 + MLT1L LTR MaLR 417 575 -40 21 36 0 0 chr5 26495575 26495603 -173134547 + AT_rich Low_complexity Low_complexity 1 28 0 2282 107 0 0 chr5 26496090 26496400 -173133750 - AluSg SINE Alu 0 310 1 24 0 0 0 chr5 26497815 26497839 -173132311 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 26498863 26498886 -173131264 + AT_rich Low_complexity Low_complexity 1 23 0 210 171 0 0 chr5 26498938 26498973 -173131177 + A-rich Low_complexity Low_complexity 1 35 0 199 333 42 85 chr5 26499577 26499766 -173130384 + L3 LINE CR1 538 718 -859 588 263 44 35 chr5 26500064 26500292 -173129858 - MER115 DNA AcHobo -10 683 454 348 336 137 38 chr5 26500289 26500581 -173129569 - LTR16A1 LTR ERVL -136 321 1 * 1250 359 70 32 chr5 26500708 26501942 -173128208 - ERVL LTR ERVL -380 5384 4103 434 333 46 56 chr5 26502075 26502469 -173127681 - ERVL LTR ERVL -1892 3872 3483 2272 180 31 10 chr5 26502686 26503103 -173127047 + MSTB LTR MaLR 1 426 0 367 283 19 0 chr5 26503481 26503587 -173126563 + HERV16 LTR ERVL 2683 2790 -2206 339 44 0 0 chr5 26503589 26503634 -173126516 + (CA)n Simple_repeat Simple_repeat 2 46 0 236 250 17 0 chr5 26503738 26503798 -173126352 - LTR16A1 LTR ERVL -385 72 12 2084 99 45 3 chr5 26504063 26504355 -173125795 - AluSc SINE Alu -4 305 2 23 33 0 0 chr5 26504614 26504644 -173125506 + AT_rich Low_complexity Low_complexity 1 30 0 30 45 0 0 chr5 26504831 26504875 -173125275 + AT_rich Low_complexity Low_complexity 1 44 0 802 71 18 0 chr5 26504976 26505088 -173125062 + L1PA7 LINE L1 6038 6151 -3 1095 255 59 47 chr5 26505094 26505603 -173124547 - L1ME1 LINE L1 -5 6161 5647 201 245 43 0 chr5 26505608 26505702 -173124448 + T-rich Low_complexity Low_complexity 4 101 0 * 292 260 35 0 chr5 26505655 26505824 -173124326 + (TA)n Simple_repeat Simple_repeat 1 175 0 593 270 53 11 chr5 26505856 26506045 -173124105 - L1ME1 LINE L1 -1886 4260 4064 1962 130 16 3 chr5 26506045 26506353 -173123797 - THE1C LTR MaLR 0 375 64 2301 64 30 0 chr5 26506737 26507034 -173123116 - AluY SINE Alu -5 306 1 197 277 0 0 chr5 26507784 26507831 -173122319 + MER5A DNA MER1_type 140 186 -3 23 0 0 0 chr5 26508415 26508438 -173121712 + AT_rich Low_complexity Low_complexity 1 23 0 317 24 24 0 chr5 26508793 26508835 -173121315 + (GGA)n Simple_repeat Simple_repeat 3 45 0 949 40 8 16 chr5 26508841 26508965 -173121185 + L1PA5 LINE L1 6027 6149 -5 24 53 0 0 chr5 26508978 26509016 -173121134 + AT_rich Low_complexity Low_complexity 1 38 0 728 168 0 23 chr5 26509031 26509162 -173120988 - FLAM_C SINE Alu -5 128 1 1400 132 5 0 chr5 26509176 26509396 -173120754 - L1PA13 LINE L1 -4 6159 5939 1256 229 29 58 chr5 26509463 26509839 -173120311 - MLT1A1 LTR MaLR 0 365 1 28 0 0 0 chr5 26510005 26510033 -173120117 + AT_rich Low_complexity Low_complexity 1 28 0 1196 235 104 22 chr5 26510168 26510534 -173119616 + MSTD LTR MaLR 1 396 0 9881 207 26 25 chr5 26510698 26511484 -173118666 + L1 LINE L1 2921 3705 -2458 1427 176 81 31 chr5 26511484 26511841 -173118309 + THE1C LTR MaLR 1 375 0 9881 207 26 25 chr5 26511841 26513548 -173116602 + L1 LINE L1 3705 5420 -743 650 268 6 28 chr5 26513659 26513859 -173116291 - MLT2C1 LTR ERVL -37 427 164 1267 125 0 0 chr5 26513861 26514045 -173116105 + AluSc SINE Alu 126 309 0 608 238 6 25 chr5 26514061 26514174 -173115976 - MLT2C1 LTR ERVL -227 170 59 13007 171 21 3 chr5 26514174 26516549 -173113601 - Tigger1 DNA MER2_type 0 2418 1 608 238 6 25 chr5 26516549 26516595 -173113555 - MLT2C1 LTR ERVL -338 59 14 1901 100 89 0 chr5 26517317 26517587 -173112563 + AluSg SINE Alu 1 294 -16 4298 170 36 26 chr5 26518139 26519357 -173110793 + L1PA16 LINE L1 4930 6161 -5 928 163 48 12 chr5 26519530 26519696 -173110454 - MLT2B2 LTR ERVL -343 172 1 24 0 0 0 chr5 26519848 26519872 -173110278 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr5 26520540 26520576 -173109574 + AT_rich Low_complexity Low_complexity 1 36 0 216 286 0 0 chr5 26521299 26521362 -173108788 + T-rich Low_complexity Low_complexity 1 63 0 228 293 24 24 chr5 26522424 26522506 -173107644 - MER96 DNA MER1_type? -93 82 1 290 255 39 29 chr5 26522627 26522729 -173107421 + L1MEc LINE L1 1542 1644 -4752 441 304 101 29 chr5 26523211 26523637 -173106513 + L1MEc LINE L1 2148 2576 -3639 387 269 70 57 chr5 26523753 26523952 -173106198 + L1MEc LINE L1 2713 2920 -3295 1833 170 0 0 chr5 26523952 26524274 -173105876 + AluSx SINE Alu 1 322 0 387 269 70 57 chr5 26524274 26524374 -173105776 + L1MEc LINE L1 2920 3017 -3198 529 314 122 45 chr5 26524376 26524911 -173105239 + L1MEc LINE L1 3700 4275 -1940 30 0 0 0 chr5 26524948 26524978 -173105172 + AT_rich Low_complexity Low_complexity 1 30 0 1403 119 0 0 chr5 26525107 26525301 -173104849 + AluY SINE Alu 95 288 -23 5302 138 22 9 chr5 26525301 26526446 -173103704 + L1PA14 LINE L1 5002 6161 0 33441 48 27 2 chr5 26526806 26532781 -173097369 - L1PA2 LINE L1 -2 6153 7 215 372 13 0 chr5 26533500 26533578 -173096572 + MER5B DNA MER1_type 49 127 -51 1462 165 135 15 chr5 26533688 26534021 -173096129 - THE1C LTR MaLR 0 375 3 8065 165 25 55 chr5 26534023 26535649 -173094501 - THE1C-int LTR MaLR 0 1580 4 1852 158 61 25 chr5 26535652 26536014 -173094136 - THE1C LTR MaLR 0 375 1 1419 208 10 20 chr5 26536105 26536398 -173093752 - AluJo SINE Alu -22 290 1 26 30 0 0 chr5 26536632 26536665 -173093485 + AT_rich Low_complexity Low_complexity 1 33 0 2526 86 8 6 chr5 26537200 26537551 -173092599 + THE1A LTR MaLR 1 352 -3 1308 270 83 61 chr5 26537881 26538008 -173092142 - L1MC4 LINE L1 -151 7891 7768 1744 165 29 38 chr5 26538008 26538323 -173091827 + AluSx SINE Alu 1 312 0 1308 270 83 61 chr5 26538323 26538835 -173091315 - L1MC4 LINE L1 -274 7768 7238 711 271 127 66 chr5 26538842 26539329 -173090821 - L1MC4a LINE L1 -811 6997 6481 278 337 111 12 chr5 26539782 26539954 -173090196 - L2 LINE L2 0 3313 3125 196 361 0 0 chr5 26540112 26540173 -173089977 - L2 LINE L2 -556 2758 2698 585 296 13 52 chr5 26540226 26540308 -173089842 + MER58A DNA MER1_type 1 85 -2335 877 261 61 68 chr5 26540308 26540703 -173089447 - MSTD LTR MaLR -2 394 3 585 296 13 52 chr5 26540703 26540853 -173089297 + MER58A DNA MER1_type 85 224 0 284 203 107 7 chr5 26541040 26541147 -173089003 - L1MCc LINE L1 -4871 1551 1440 976 292 88 23 chr5 26541179 26541610 -173088540 - L1MCc LINE L1 -5222 1201 743 516 291 72 52 chr5 26541652 26541903 -173088247 - L1MCc LINE L1 -5825 598 343 254 241 36 28 chr5 26542259 26542373 -173087777 - L1ME LINE L1 -540 5626 5518 215 330 68 0 chr5 26543243 26543346 -173086804 - MIR SINE MIR -71 191 82 262 236 34 67 chr5 26543575 26543664 -173086486 + L2 LINE L2 3184 3269 -3 23 33 0 0 chr5 26543744 26543774 -173086376 + AT_rich Low_complexity Low_complexity 1 30 0 30 83 0 0 chr5 26543955 26544027 -173086123 + AT_rich Low_complexity Low_complexity 1 72 0 23 101 0 0 chr5 26544143 26544222 -173085928 + AT_rich Low_complexity Low_complexity 1 79 0 21 0 0 0 chr5 26544737 26544758 -173085392 + AT_rich Low_complexity Low_complexity 1 21 0 1822 155 75 31 chr5 26545880 26546229 -173083921 + THE1B LTR MaLR 1 364 0 11332 113 1 0 chr5 26546229 26547808 -173082342 + THE1B-int LTR MaLR 1 1580 0 2128 134 73 20 chr5 26547810 26548154 -173081996 + THE1B LTR MaLR 3 364 0 1714 175 0 4 chr5 26548570 26548850 -173081300 - AluSx SINE Alu -23 289 11 1980 151 7 0 chr5 26548923 26549214 -173080936 + AluSq SINE Alu 3 295 -18 2111 116 0 0 chr5 26550404 26550724 -173079426 + AluSx SINE Alu 1 320 0 184 339 100 23 chr5 26550973 26551103 -173079047 + MIR SINE MIR 48 187 -75 25 0 0 0 chr5 26551303 26551328 -173078822 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 26551787 26551818 -173078332 + AT_rich Low_complexity Low_complexity 1 31 0 891 143 26 0 chr5 26552081 26552235 -173077915 + MER2 DNA MER2_type 56 213 -132 1589 234 31 50 chr5 26552961 26553443 -173076707 + MLT1D LTR MaLR 26 498 -7 2113 121 7 0 chr5 26554027 26554325 -173075825 - AluSx SINE Alu -12 300 1 4060 204 19 38 chr5 26554437 26555979 -173074171 + L1MA4 LINE L1 4591 6166 -5 29 84 0 0 chr5 26555986 26556057 -173074093 + AT_rich Low_complexity Low_complexity 1 71 0 40 67 0 0 chr5 26556186 26556261 -173073889 + AT_rich Low_complexity Low_complexity 1 75 0 289 236 0 47 chr5 26556557 26556684 -173073466 + A-rich Low_complexity Low_complexity 4 124 0 1168 340 88 75 chr5 26559014 26560511 -173069639 + ERVL LTR ERVL 1491 3074 -2637 2410 74 7 3 chr5 26560511 26560820 -173069330 + AluY SINE Alu 1 310 -1 1168 340 88 75 chr5 26560820 26561201 -173068949 + ERVL LTR ERVL 3074 3449 -2262 401 339 67 38 chr5 26561293 26561665 -173068485 + ERVL LTR ERVL 3564 3946 -1708 309 371 59 11 chr5 26563106 26563292 -173066858 + LTR16C LTR ERVL 297 491 0 2057 119 37 11 chr5 26563453 26563805 -173066345 - MER4A-int LTR ERV1 -1846 4752 4392 3357 83 40 2 chr5 26563812 26564282 -173065868 - L1PA7 LINE L1 -2 6152 5665 2606 77 0 0 chr5 26564282 26564631 -173065519 + L1P LINE L1 4911 5259 -887 2604 144 73 32 chr5 26564631 26565166 -173064984 - MER4A-int LTR ERV1 -2205 4393 3837 1004 169 42 35 chr5 26565167 26565427 -173064723 - MER4A-int LTR ERV1 -2919 3679 3418 1018 167 46 82 chr5 26565443 26566043 -173064107 - MER4A-int LTR ERV1 -2430 3273 1919 1304 160 72 0 chr5 26566045 26566282 -173063868 + LTR8 LTR ERV1 4 257 -434 3761 105 65 27 chr5 26566282 26566987 -173063163 - MER4A-int LTR ERV1 -4103 2495 1764 384 22 0 0 chr5 26566992 26567037 -173063113 + (CA)n Simple_repeat Simple_repeat 2 46 0 4319 115 25 31 chr5 26567037 26567946 -173062204 - MER4A-int LTR ERV1 -5611 1147 189 817 247 33 2 chr5 26567963 26568168 -173061982 - MER4A-int LTR ERV1 -3512 2434 1987 231 260 60 30 chr5 26568195 26568295 -173061855 - L2 LINE L2 -1519 1795 1693 2409 110 156 37 chr5 26568410 26568891 -173061259 - MER4A-int LTR ERV1 -5912 686 65 5018 82 28 3 chr5 26568891 26569595 -173060555 + LTR30 LTR ERV1 1 722 0 2409 110 156 37 chr5 26569595 26569669 -173060481 - MER4A-int LTR ERV1 -6533 65 1 1779 130 3 78 chr5 26569672 26570045 -173060105 - MER4A LTR ERV1 0 664 261 657 121 0 10 chr5 26570045 26570144 -173060006 - MER4A LTR ERV1 -566 98 1 1239 261 71 60 chr5 26570150 26570787 -173059363 - L1MC4a LINE L1 -1900 5908 5265 245 328 17 9 chr5 26571175 26571291 -173058859 - L1MC4a LINE L1 -1319 4827 4711 2002 125 4 0 chr5 26571479 26571793 -173058357 - AluSx SINE Alu 0 319 5 61 90 0 0 chr5 26572696 26572862 -173057288 + AT_rich Low_complexity Low_complexity 1 166 0 6215 150 56 18 chr5 26573215 26574400 -173055750 - Tigger3b DNA MER2_type -1 1230 1 243 133 0 0 chr5 26574468 26574513 -173055637 + L1MA8 LINE L1 6243 6287 -4 4439 182 12 11 chr5 26574543 26575399 -173054751 + L1PA16 LINE L1 5301 6157 -9 1554 158 33 39 chr5 26575388 26575723 -173054427 + L1MA8 LINE L1 5938 6270 -21 * 246 236 0 0 chr5 26576092 26576147 -173054003 + L1MA8 LINE L1 6057 6111 -180 41 48 0 0 chr5 26576153 26576215 -173053935 + AT_rich Low_complexity Low_complexity 1 62 0 197 0 0 67 chr5 26576423 26576453 -173053697 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2452 99 14 3 chr5 26576456 26576801 -173053349 - L1PA10 LINE L1 -30 6138 5790 2830 101 5 5 chr5 26576803 26577218 -173052932 + L1PA10 LINE L1 5372 5786 -382 6353 191 8 6 chr5 26577527 26578819 -173051331 - L1P LINE L1 -1578 4883 3589 29 47 0 0 chr5 26579084 26579127 -173051023 + AT_rich Low_complexity Low_complexity 1 43 0 5762 119 13 11 chr5 26579207 26580493 -173049657 - L1PA13 LINE L1 -2 6161 4870 1585 232 76 19 chr5 26580947 26581409 -173048741 + L1MD2 LINE L1 5860 6347 -12 492 242 50 28 chr5 26581803 26581985 -173048165 + MER106A DNA MER1_type 51 236 0 1409 251 38 15 chr5 26582034 26582508 -173047642 + Charlie1b DNA MER1_type 5 489 -34 2127 130 22 33 chr5 26582896 26583264 -173046886 + THE1B LTR MaLR 1 364 0 30 59 0 0 chr5 26583444 26583495 -173046655 + AT_rich Low_complexity Low_complexity 1 51 0 24 67 0 0 chr5 26583557 26583602 -173046548 + AT_rich Low_complexity Low_complexity 1 45 0 20148 136 13 16 chr5 26584657 26587126 -173043024 - L1PA8A LINE L1 -28 6418 3984 2047 103 0 7 chr5 26587126 26587434 -173042716 + AluSg SINE Alu 1 306 0 20148 136 13 16 chr5 26587434 26589207 -173040943 - L1PA8A LINE L1 -2462 3984 2206 6205 232 8 39 chr5 26589310 26591208 -173038942 - L1P3 LINE L1 -3834 2627 756 6929 160 39 21 chr5 26591312 26591587 -173038563 - L1PA8A LINE L1 -4734 1141 873 198 71 0 0 chr5 26591587 26591615 -173038535 + (TTG)n Simple_repeat Simple_repeat 1 28 0 6929 160 39 21 chr5 26591615 26592812 -173037338 - L1PA8A LINE L1 -5002 873 4 28 29 0 0 chr5 26592825 26592860 -173037290 + AT_rich Low_complexity Low_complexity 1 35 0 2244 72 0 0 chr5 26593416 26593692 -173036458 - AluY SINE Alu -2 309 34 322 345 110 16 chr5 26593879 26594198 -173035952 + LTR33 LTR ERVL 166 514 -7 27 73 0 0 chr5 26594469 26594524 -173035626 + AT_rich Low_complexity Low_complexity 1 55 0 22 35 0 0 chr5 26594584 26594613 -173035537 + AT_rich Low_complexity Low_complexity 1 29 0 2129 172 15 32 chr5 26594695 26595166 -173034984 - L1MB1 LINE L1 -1 6167 5705 3478 205 47 56 chr5 26595167 26595830 -173034320 - L1MB1 LINE L1 -2126 4020 3369 1780 119 119 39 chr5 26595830 26596167 -173033983 + THE1B LTR MaLR 1 364 0 3478 205 47 56 chr5 26596167 26596534 -173033616 - L1MB1 LINE L1 -2777 3369 3000 * 4017 213 59 15 chr5 26596533 26597960 -173032190 + L1MA9 LINE L1 4792 6283 -29 23 33 0 0 chr5 26597970 26598000 -173032150 + AT_rich Low_complexity Low_complexity 1 30 0 846 174 92 5 chr5 26599446 26599642 -173030508 + MER109 Unknown Unknown 542 754 -1678 275 302 28 0 chr5 26599859 26599965 -173030185 - HsTC2 DNA Tc2 -1786 112 4 511 271 24 24 chr5 26603456 26603592 -173026558 - L1MA10 LINE L1 -41 6293 6155 243 61 0 0 chr5 26603592 26603625 -173026525 + (TG)n Simple_repeat Simple_repeat 2 34 0 511 271 24 24 chr5 26603625 26603658 -173026492 - L1MA10 LINE L1 -178 6156 6124 6820 50 14 8 chr5 26603683 26604642 -173025508 + L1PA5 LINE L1 5183 6146 -8 2382 140 12 22 chr5 26604645 26605058 -173025092 + L1P4 LINE L1 5315 5723 -443 3143 196 57 40 chr5 26605072 26605815 -173024335 - L1MB1 LINE L1 -139 6029 5288 185 35 69 0 chr5 26605815 26605844 -173024306 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3143 196 57 40 chr5 26605844 26605926 -173024224 - L1MB1 LINE L1 -880 5288 5209 41 21 0 0 chr5 26605930 26605978 -173024172 + AT_rich Low_complexity Low_complexity 1 48 0 1710 172 40 0 chr5 26606039 26606336 -173023814 + AluJb SINE Alu 1 309 -3 1964 74 0 0 chr5 26606685 26606964 -173023186 + AluY SINE Alu 39 317 0 1924 123 5 115 chr5 26607321 26607695 -173022455 + MER1B DNA MER1_type 3 335 -4 388 93 27 0 chr5 26608725 26608800 -173021350 + (TA)n Simple_repeat Simple_repeat 1 77 0 683 147 202 23 chr5 26608800 26608929 -173021221 + AluSg/x SINE Alu 135 286 -24 21 0 0 0 chr5 26608952 26608973 -173021177 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 26610153 26610175 -173019975 + AT_rich Low_complexity Low_complexity 1 22 0 713 288 5 26 chr5 26610401 26610592 -173019558 + Tigger3(Golem) DNA MER2_type 1 187 -2842 208 231 22 66 chr5 26611488 26611579 -173018571 + MIR SINE MIR 122 208 -54 14541 122 32 14 chr5 26611771 26614064 -173016086 + MER109 Unknown Unknown 100 2432 0 1052 193 18 14 chr5 26614576 26614794 -173015356 - AluJo SINE Alu -5 307 89 372 264 95 7 chr5 26615711 26615859 -173014291 - MER90 LTR ERV1 -283 292 132 1920 217 20 80 chr5 26616059 26616648 -173013502 + MLT2B3 LTR ERVL 1 554 0 198 0 0 0 chr5 26616649 26616671 -173013479 + (TG)n Simple_repeat Simple_repeat 2 23 0 212 260 13 0 chr5 26617323 26617400 -173012750 + (TA)n Simple_repeat Simple_repeat 2 79 0 290 186 12 31 chr5 26617411 26617572 -173012578 + (TA)n Simple_repeat Simple_repeat 2 159 0 805 212 61 39 chr5 26617600 26617782 -173012368 - MER46A DNA MER2_type -2495 236 46 2371 77 0 3 chr5 26617782 26618082 -173012068 + AluY SINE Alu 1 299 -12 805 212 61 39 chr5 26618082 26618130 -173012020 - MER46A DNA MER2_type -2685 46 1 1430 147 52 34 chr5 26618557 26618893 -173011257 + Tigger3(Golem) DNA MER2_type 1 2981 -48 21 0 0 0 chr5 26619758 26619779 -173010371 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 26619996 26620016 -173010134 + (GA)n Simple_repeat Simple_repeat 1 20 0 4777 162 23 13 chr5 26620110 26620609 -173009541 - L1MA8 LINE L1 -5 6286 5772 2181 112 0 0 chr5 26620609 26620620 -173009530 - AluSx SINE Alu -16 296 286 369 0 0 0 chr5 26620620 26620661 -173009489 + (TATG)n Simple_repeat Simple_repeat 2 42 0 2181 112 0 0 chr5 26620661 26620945 -173009205 - AluSx SINE Alu -25 287 1 4777 162 23 13 chr5 26620945 26621360 -173008790 - L1MA8 LINE L1 -519 5772 5363 5922 127 88 67 chr5 26621677 26623646 -173006504 - pTR5 LTR ERV1 0 2438 741 2428 197 22 15 chr5 26625845 26626383 -173003767 - L1MC3 LINE L1 -7 7778 7237 469 155 32 75 chr5 26626387 26626644 -173003506 + (TATAG)n Simple_repeat Simple_repeat 1 246 0 229 122 68 0 chr5 26626856 26626930 -173003220 + (TTATA)n Simple_repeat Simple_repeat 1 79 0 31 58 0 0 chr5 26627189 26627241 -173002909 + AT_rich Low_complexity Low_complexity 1 52 0 22 0 0 0 chr5 26627409 26627431 -173002719 + AT_rich Low_complexity Low_complexity 1 22 0 184 197 13 13 chr5 26627756 26627832 -173002318 + (TA)n Simple_repeat Simple_repeat 2 77 0 258 185 0 31 chr5 26628204 26628269 -173001881 + (TAAA)n Simple_repeat Simple_repeat 1 63 0 483 325 90 62 chr5 26629092 26629625 -173000525 + ERVL LTR ERVL 906 1453 -4311 1516 123 58 0 chr5 26629790 26630051 -173000099 - L1MA5A LINE L1 -4 6293 6018 313 92 0 46 chr5 26630265 26630312 -172999838 + (TTTTTA)n Simple_repeat Simple_repeat 3 48 -16 6140 10 0 0 chr5 26630312 26631005 -172999145 - L1PA3 LINE L1 0 6155 5463 313 92 0 46 chr5 26631005 26631022 -172999128 + (TTTTTA)n Simple_repeat Simple_repeat 48 64 0 213 222 0 0 chr5 26631156 26631219 -172998931 + (CATA)n Simple_repeat Simple_repeat 2 64 0 192 40 0 0 chr5 26631219 26631244 -172998906 + (TG)n Simple_repeat Simple_repeat 2 26 0 276 270 144 0 chr5 26632396 26632507 -172997643 - L1ME LINE L1 -433 5688 5562 25 0 0 0 chr5 26632698 26632723 -172997427 + AT_rich Low_complexity Low_complexity 1 25 0 228 133 89 0 chr5 26632735 26632780 -172997370 + L2 LINE L2 3265 3313 0 21 0 0 0 chr5 26634884 26634905 -172995245 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 26634962 26634984 -172995166 + AT_rich Low_complexity Low_complexity 1 22 0 1751 162 33 16 chr5 26635326 26636049 -172994101 + L1PA13 LINE L1 1 1895 -4892 * 14442 211 33 11 chr5 26636047 26637711 -172992439 + L1P LINE L1 2614 4240 -2557 255 79 0 0 chr5 26637711 26637749 -172992401 + (CA)n Simple_repeat Simple_repeat 2 39 0 14442 211 33 11 chr5 26637749 26639066 -172991084 + L1P LINE L1 4240 5680 -1117 2125 100 4 0 chr5 26639066 26639366 -172990784 + AluY SINE Alu 1 301 0 14442 211 33 11 chr5 26639366 26639742 -172990408 + L1P LINE L1 5680 6046 -751 497 158 73 0 chr5 26639743 26639825 -172990325 + AluS SINE Alu 1 88 -225 208 286 22 11 chr5 26640223 26640314 -172989836 + (TA)n Simple_repeat Simple_repeat 1 92 0 24 77 0 0 chr5 26640502 26640554 -172989596 + AT_rich Low_complexity Low_complexity 1 52 0 22 70 0 0 chr5 26641633 26641676 -172988474 + AT_rich Low_complexity Low_complexity 1 43 0 2850 6 0 0 chr5 26641703 26642015 -172988135 + AluYb8 SINE Alu 1 312 -6 27 49 0 0 chr5 26643152 26643193 -172986957 + AT_rich Low_complexity Low_complexity 1 41 0 216 196 11 22 chr5 26644075 26644167 -172985983 + (TA)n Simple_repeat Simple_repeat 2 92 0 540 130 16 49 chr5 26644183 26644368 -172985782 + (TA)n Simple_repeat Simple_repeat 2 180 0 230 242 22 22 chr5 26644384 26644475 -172985675 - L1MC4 LINE L1 -1338 6704 6614 225 146 0 0 chr5 26644479 26644520 -172985630 + LTR66 LTR ERVL 398 438 -172 243 156 13 52 chr5 26644541 26644618 -172985532 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 25 0 0 0 chr5 26645155 26645180 -172984970 + AT_rich Low_complexity Low_complexity 1 25 0 232 188 94 16 chr5 26645218 26645282 -172984868 - MLT1H LTR MaLR 0 549 481 2314 68 0 7 chr5 26645464 26645756 -172984394 - AluY SINE Alu -19 292 3 265 277 66 36 chr5 26645807 26645944 -172984206 - MLT1H LTR MaLR -406 143 3 244 302 107 65 chr5 26646004 26646219 -172983931 + LTR16A LTR ERVL 25 248 -202 398 237 58 64 chr5 26647517 26647690 -172982460 - MLT1H LTR MaLR -375 174 3 263 356 25 0 chr5 26647854 26647972 -172982178 + L2 LINE L2 2342 2462 -852 189 0 0 0 chr5 26648288 26648309 -172981841 + (T)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr5 26648759 26648788 -172981362 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr5 26649356 26649397 -172980753 + AT_rich Low_complexity Low_complexity 1 41 0 24 32 0 0 chr5 26649509 26649540 -172980610 + AT_rich Low_complexity Low_complexity 1 31 0 304 244 31 75 chr5 26649665 26649825 -172980325 - L1MEc LINE L1 -5066 1330 1178 237 288 59 20 chr5 26649847 26650000 -172980150 - L1M2c LINE L1 -4809 1980 1822 252 220 0 0 chr5 26650167 26650226 -172979924 - MLT2C1 LTR ERVL 0 520 462 290 87 22 0 chr5 26650238 26650284 -172979866 + (GA)n Simple_repeat Simple_repeat 1 47 0 1512 236 20 9 chr5 26650289 26650633 -172979517 - MLT2C1 LTR ERVL -48 349 2 257 330 66 0 chr5 26651800 26651906 -172978244 + ERVL LTR ERVL 1341 1453 -4311 2217 122 9 3 chr5 26652067 26652403 -172977747 + L1PA13 LINE L1 5612 5949 -214 2138 150 22 19 chr5 26652403 26652764 -172977386 - THE1B LTR MaLR 0 364 3 8543 112 4 2 chr5 26652766 26653952 -172976198 - THE1B-int LTR MaLR 0 1580 393 580 129 10 0 chr5 26653952 26654053 -172976097 + L1PA13 LINE L1 6062 6163 0 22 35 0 0 chr5 26654053 26654082 -172976068 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr5 26654387 26654432 -172975718 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr5 26655455 26655491 -172974659 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 26655758 26655782 -172974368 + AT_rich Low_complexity Low_complexity 1 24 0 578 326 126 26 chr5 26657031 26657381 -172972769 + L2 LINE L2 1455 1839 -1475 270 352 30 30 chr5 26657414 26657650 -172972500 + L2 LINE L2 3074 3309 -4 879 319 81 23 chr5 26658274 26658706 -172971444 + LTR16B LTR ERVL 8 464 0 965 320 38 12 chr5 26659018 26659437 -172970713 + ERVL LTR ERVL 839 1268 -3728 24 0 0 0 chr5 26660759 26660783 -172969367 + AT_rich Low_complexity Low_complexity 1 24 0 507 303 17 27 chr5 26660903 26661200 -172968950 - L1ME LINE L1 -552 5610 5317 7775 18 0 5 chr5 26661205 26662727 -172967423 - L1PA3 LINE L1 -4 6151 4634 305 253 160 38 chr5 26662879 26663116 -172967034 + L1M4 LINE L1 4807 5072 -1074 9988 195 32 103 chr5 26663206 26664515 -172965635 + L1PB4 LINE L1 2300 3701 -2445 1515 209 29 3 chr5 26664515 26664822 -172965328 + L1PB4 LINE L1 5825 6139 -17 9988 195 32 103 chr5 26664822 26664922 -172965228 + L1PB4 LINE L1 3701 3807 -2339 1057 130 19 0 chr5 26664922 26665084 -172965066 + AluSg/x SINE Alu 146 310 -2 9988 195 32 103 chr5 26665084 26665497 -172964653 + L1PB4 LINE L1 3807 4248 -1898 317 89 0 0 chr5 26665497 26665542 -172964608 + MADE1 DNA Mariner 1 45 -35 9988 195 32 103 chr5 26665542 26666675 -172963475 + L1PB4 LINE L1 4248 5237 -909 954 226 51 30 chr5 26667209 26667444 -172962706 - MLT1B LTR MaLR 0 390 151 23 0 0 0 chr5 26669569 26669592 -172960558 + AT_rich Low_complexity Low_complexity 1 23 0 360 152 0 0 chr5 26670488 26670554 -172959596 + (TA)n Simple_repeat Simple_repeat 2 67 0 3956 171 30 52 chr5 26670810 26671690 -172958460 - L1MB3 LINE L1 -2 6181 5322 1797 131 7 18 chr5 26673289 26673610 -172956540 + AluSx SINE Alu 4 321 0 790 219 122 15 chr5 26673950 26674176 -172955974 + AluJo SINE Alu 66 312 0 1764 152 18 11 chr5 26674252 26674564 -172955586 - AluSx SINE Alu 0 314 1 408 336 92 37 chr5 26674606 26674933 -172955217 - L1ME LINE L1 -327 5794 5450 17092 115 42 23 chr5 26676263 26678917 -172951233 - Charlie3 DNA MER1_type -4 2706 1 619 298 64 34 chr5 26679040 26679335 -172950815 + LTR16C LTR ERVL 188 491 0 26 82 0 0 chr5 26679898 26679959 -172950191 + AT_rich Low_complexity Low_complexity 1 61 0 2953 96 41 2 chr5 26680046 26680482 -172949668 + MLT2A2 LTR ERVL 1 453 0 26 0 0 0 chr5 26680831 26680857 -172949293 + AT_rich Low_complexity Low_complexity 1 26 0 1756 159 55 0 chr5 26680867 26681156 -172948994 + AluSg SINE Alu 3 307 -3 1397 246 66 0 chr5 26681314 26681663 -172948487 - MER67D LTR ERV1 -138 376 5 3997 191 8 0 chr5 26683692 26684452 -172945698 - L1P LINE L1 -3457 2689 1924 9245 186 62 12 chr5 26684469 26684640 -172945510 + L1P LINE L1 3057 3218 -2928 2098 100 0 7 chr5 26684640 26684949 -172945201 + AluSc SINE Alu 1 307 0 9245 186 62 12 chr5 26684949 26686218 -172943932 + L1P LINE L1 3218 4625 -1521 3559 71 2 0 chr5 26686218 26686670 -172943480 + MLT2A2 LTR ERVL 1 453 0 9245 186 62 12 chr5 26686670 26687199 -172942951 + L1P LINE L1 4625 5126 -1020 481 138 23 0 chr5 26687301 26687388 -172942762 + L1PA13 LINE L1 6075 6163 0 703 230 52 17 chr5 26687975 26688149 -172942001 + MER20 DNA MER1_type 2 181 -38 21 0 0 0 chr5 26691045 26691066 -172939084 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 26691155 26691176 -172938974 + AT_rich Low_complexity Low_complexity 1 21 0 183 387 16 0 chr5 26691237 26691299 -172938851 - L2 LINE L2 -1045 2269 2207 335 143 31 10 chr5 26691765 26691863 -172938287 + (TA)n Simple_repeat Simple_repeat 1 100 0 1238 213 109 30 chr5 26692053 26692391 -172937759 + MLT1A1 LTR MaLR 1 365 0 288 248 26 17 chr5 26693268 26693385 -172936765 + (TA)n Simple_repeat Simple_repeat 1 118 0 227 39 96 0 chr5 26694229 26694281 -172935869 + (TTAGG)n Simple_repeat Simple_repeat 4 60 0 341 221 15 0 chr5 26694841 26694909 -172935241 + Tigger2 DNA MER2_type 1 69 -2649 * 1318 187 142 89 chr5 26694907 26695324 -172934826 + Tigger2 DNA MER2_type 2280 2718 0 27 0 0 0 chr5 26696360 26696387 -172933763 + AT_rich Low_complexity Low_complexity 1 27 0 471 72 0 0 chr5 26697095 26697164 -172932986 + AluS SINE Alu 1 69 -244 1396 193 23 36 chr5 26697220 26697517 -172932633 - MER61A LTR ERV1 0 343 49 1962 70 12 8 chr5 26697517 26697774 -172932376 - AluSq SINE Alu -55 258 1 2229 211 17 6 chr5 26697782 26698251 -172931899 - ERVL LTR ERVL -4525 1239 766 435 62 0 0 chr5 26698296 26698387 -172931763 + Alu SINE Alu 245 335 0 3024 230 22 18 chr5 26698387 26699062 -172931088 + ERVL LTR ERVL 1235 1912 -3852 216 97 0 0 chr5 26699062 26699093 -172931057 + (CA)n Simple_repeat Simple_repeat 2 32 0 291 157 0 0 chr5 26699110 26699161 -172930989 + T-rich Low_complexity Low_complexity 1 51 0 26 69 0 35 chr5 26700002 26700089 -172930061 + AT_rich Low_complexity Low_complexity 1 84 0 258 275 99 11 chr5 26801012 26801103 -172829047 + L2 LINE L2 3172 3270 -2 23 0 0 0 chr5 26801637 26801660 -172828490 + AT_rich Low_complexity Low_complexity 1 23 0 1362 117 0 10 chr5 26802048 26802254 -172827896 + L1PB1 LINE L1 5947 6150 -1 794 173 13 0 chr5 26802532 26802682 -172827468 + MER47A DNA MER2_type 25 176 -190 21 0 0 0 chr5 26803082 26803103 -172827047 + AT_rich Low_complexity Low_complexity 1 21 0 429 285 27 35 chr5 26804012 26804268 -172825882 + L1MEd LINE L1 972 1225 -4894 1249 207 23 4 chr5 26804295 26804556 -172825594 + AluJo SINE Alu 13 278 -34 1870 162 3 0 chr5 26805132 26805422 -172824728 + AluSx SINE Alu 1 291 -21 30 45 0 0 chr5 26805511 26805555 -172824595 + AT_rich Low_complexity Low_complexity 1 44 0 428 282 99 42 chr5 26806193 26806526 -172823624 + MER57A LTR ERV1 78 429 -5 8805 205 21 21 chr5 26807365 26808298 -172821852 - L1P LINE L1 -1637 4509 3578 1659 139 0 0 chr5 26808298 26808535 -172821615 - AluSq SINE Alu -76 237 1 8805 205 21 21 chr5 26808535 26808600 -172821550 - L1P LINE L1 -2568 3578 3515 189 0 0 0 chr5 26808600 26808621 -172821529 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 8805 205 21 21 chr5 26808621 26809661 -172820489 - L1P LINE L1 -2631 3515 2469 5116 154 24 27 chr5 26809657 26811306 -172818844 + L1PA13 LINE L1 4519 6161 -2 * 1248 197 42 32 chr5 26811492 26811801 -172818349 - AluJo SINE Alu 0 312 1 306 271 10 31 chr5 26811853 26811949 -172818201 + MER57A-int LTR ERV1 283 376 -4560 225 328 30 30 chr5 26812662 26812796 -172817354 + MER34C LTR ERV1 294 427 -158 360 237 77 38 chr5 26812901 26813340 -172816810 + MER57A-int LTR ERV1 879 1968 -418 1338 157 11 77 chr5 26813344 26813618 -172816532 - MER50 LTR ERV1 0 734 479 2438 87 0 3 chr5 26813652 26813963 -172816187 + AluSp SINE Alu 1 310 -3 225 0 0 0 chr5 26813963 26813988 -172816162 + (TA)n Simple_repeat Simple_repeat 2 26 0 1874 158 3 3 chr5 26814000 26814285 -172815865 - AluSx SINE Alu -27 285 1 2340 194 14 22 chr5 26814285 26814774 -172815376 - MER50 LTR ERV1 -249 485 1 1813 169 22 33 chr5 26814777 26815145 -172815005 + THE1B LTR MaLR 1 364 0 369 257 38 38 chr5 26815325 26815430 -172814720 + MER34 LTR ERV1 133 237 -305 251 277 31 0 chr5 26815430 26815495 -172814655 + MER34 LTR ERV1 476 542 0 390 219 123 61 chr5 26815566 26816005 -172814145 + MER57A-int LTR ERV1 1978 3575 -2371 1222 248 18 49 chr5 26816012 26816444 -172813706 + MER57A-int LTR ERV1 4629 5592 -1587 322 301 12 35 chr5 26816729 26816902 -172813248 + MER57A LTR ERV1 235 403 0 1850 251 42 21 chr5 26817384 26817914 -172812236 + MER87 LTR ERV1 1 541 0 28 29 0 0 chr5 26820676 26820711 -172809439 + AT_rich Low_complexity Low_complexity 1 35 0 2142 129 73 15 chr5 26821263 26821605 -172808545 + THE1B LTR MaLR 3 364 0 1199 210 98 61 chr5 26821663 26821844 -172808306 - MLT1B LTR MaLR 0 390 217 2270 156 49 10 chr5 26821844 26822255 -172807895 - MSTA LTR MaLR -1 427 1 1199 210 98 61 chr5 26822255 26822449 -172807701 - MLT1B LTR MaLR -173 217 1 392 301 148 11 chr5 26822582 26822758 -172807392 + MLT1E LTR MaLR 219 418 -175 643 239 92 25 chr5 26823173 26823411 -172806739 + L1MCc LINE L1 27 280 -6143 447 250 11 0 chr5 26823450 26823542 -172806608 + MER20 DNA MER1_type 1 93 -126 2425 167 125 18 chr5 26823547 26824051 -172806099 - MER21A LTR ERV1 -6 925 368 1033 179 25 82 chr5 26824050 26824330 -172805820 - MER21A LTR ERV1 -667 264 1 * 1406 254 118 35 chr5 26824355 26824488 -172805662 + MLT1E LTR MaLR 58 179 -414 2026 160 11 26 chr5 26824488 26824869 -172805281 - THE1C LTR MaLR 0 375 1 8998 147 29 34 chr5 26824869 26826457 -172803693 - THE1C-int LTR MaLR 0 1580 1 1786 174 35 32 chr5 26826457 26826831 -172803319 - THE1C LTR MaLR 0 375 1 1406 254 118 35 chr5 26826831 26827138 -172803012 + MLT1E LTR MaLR 179 547 -46 405 0 0 0 chr5 26827138 26827183 -172802967 + (TG)n Simple_repeat Simple_repeat 2 46 0 1406 254 118 35 chr5 26827183 26827231 -172802919 + MLT1E LTR MaLR 547 590 -3 609 205 0 8 chr5 26827237 26827354 -172802796 + MER20 DNA MER1_type 93 208 -11 414 265 8 17 chr5 26827789 26827906 -172802244 + L1MCc LINE L1 773 888 -5535 1344 224 46 40 chr5 26827909 26828235 -172801915 + MLT1D LTR MaLR 21 348 -157 2008 141 84 19 chr5 26828239 26828692 -172801458 + MER1A DNA MER1_type 6 529 0 4436 112 99 11 chr5 26828698 26829415 -172800735 - LTR17 LTR ERV1 0 780 1 559 272 32 6 chr5 26829415 26829573 -172800577 + MLT1D LTR MaLR 342 503 -2 1427 212 0 30 chr5 26829951 26830253 -172799897 - AluJb SINE Alu -19 293 1 327 25 0 0 chr5 26830329 26830369 -172799781 + (CA)n Simple_repeat Simple_repeat 2 41 0 2003 128 0 3 chr5 26830456 26830752 -172799398 + AluSx SINE Alu 3 297 -15 2272 77 0 35 chr5 26830963 26831275 -172798875 + AluY SINE Alu 1 301 -10 223 157 29 0 chr5 26832292 26832362 -172797788 + (TA)n Simple_repeat Simple_repeat 2 73 0 206 219 41 0 chr5 26832375 26832448 -172797702 + (TA)n Simple_repeat Simple_repeat 2 77 0 361 304 106 28 chr5 26832777 26833135 -172797015 + HAL1 LINE L1 758 1143 -1364 518 236 174 17 chr5 26833157 26833335 -172796815 - MER58A DNA MER1_type -15 209 4 21 36 0 0 chr5 26833535 26833563 -172796587 + AT_rich Low_complexity Low_complexity 1 28 0 224 182 0 18 chr5 26833658 26833713 -172796437 + (TA)n Simple_repeat Simple_repeat 1 54 0 708 197 8 0 chr5 26833937 26834064 -172796086 - FLAM_A SINE Alu -5 128 1 22 56 0 0 chr5 26834248 26834284 -172795866 + AT_rich Low_complexity Low_complexity 1 36 0 25 65 0 0 chr5 26834378 26834424 -172795726 + AT_rich Low_complexity Low_complexity 1 46 0 196 366 0 21 chr5 26834894 26834987 -172795163 - MIR3 SINE MIR -42 166 76 246 307 22 66 chr5 26836758 26836895 -172793255 - MLT1J LTR MaLR -190 321 191 234 105 0 0 chr5 26836927 26836965 -172793185 + (CA)n Simple_repeat Simple_repeat 1 38 0 25 65 0 0 chr5 26837492 26837538 -172792612 + AT_rich Low_complexity Low_complexity 1 46 0 372 254 42 17 chr5 26838863 26838981 -172791169 - MIR SINE MIR -29 233 113 31 44 0 0 chr5 26839907 26839952 -172790198 + AT_rich Low_complexity Low_complexity 1 45 0 276 171 49 12 chr5 26840839 26840921 -172789229 + (TA)n Simple_repeat Simple_repeat 2 86 0 242 286 13 13 chr5 26841122 26841199 -172788951 - L1M4 LINE L1 -1999 4147 4071 2342 82 20 0 chr5 26841460 26841765 -172788385 + AluSx SINE Alu 1 311 -1 332 333 58 104 chr5 26842131 26842545 -172787605 - L2 LINE L2 -854 2460 2066 183 391 62 0 chr5 26842638 26842766 -172787384 - L2 LINE L2 -1496 1818 1683 1634 256 37 37 chr5 26843367 26843855 -172786295 + LTR40a LTR ERVL 23 510 -9 22 0 0 0 chr5 26844510 26844532 -172785618 + AT_rich Low_complexity Low_complexity 1 22 0 2189 91 3 7 chr5 26844752 26845048 -172785102 + AluSq SINE Alu 9 303 -10 408 327 50 13 chr5 26846921 26847080 -172783070 - MIR SINE MIR -42 220 56 485 346 66 15 chr5 26848215 26848635 -172781515 + HERVL LTR ERVL 1776 2229 -2818 1475 189 47 153 chr5 26848714 26848751 -172781399 - L1MA9 LINE L1 -38 6274 6235 309 68 0 0 chr5 26848751 26848795 -172781355 + (TA)n Simple_repeat Simple_repeat 2 45 0 180 0 0 0 chr5 26848801 26848821 -172781329 + (CA)n Simple_repeat Simple_repeat 2 21 0 1475 189 47 153 chr5 26848821 26848839 -172781311 - L1MA9 LINE L1 -82 6230 6212 1820 196 130 9 chr5 26848839 26849293 -172780857 + LTR22 LTR ERVK 1 509 0 1475 189 47 153 chr5 26849293 26849926 -172780224 - L1MA9 LINE L1 -100 6212 5652 544 353 33 3 chr5 26850141 26850447 -172779703 + HERVL LTR ERVL 2549 2863 -2901 284 358 52 36 chr5 26850618 26850925 -172779225 + HERVL LTR ERVL 3046 3357 -2297 1084 319 163 6 chr5 26851802 26852519 -172777631 - L2 LINE L2 -913 2401 1572 324 49 0 0 chr5 26853151 26853192 -172776958 + MADE1 DNA Mariner 40 80 0 290 339 39 15 chr5 26853260 26853390 -172776760 - MIR3 SINE MIR -32 176 44 933 236 148 107 chr5 26853445 26854033 -172776117 + MLT1E1 LTR MaLR 6 617 -37 1988 141 7 0 chr5 26855406 26855705 -172774445 - AluSq SINE Alu -7 306 6 356 145 0 92 chr5 26856697 26856773 -172773377 - Charlie3 DNA MER1_type -2641 69 1 1974 116 4 0 chr5 26856806 26857081 -172773069 + AluSx SINE Alu 34 309 -3 423 248 9 0 chr5 26857145 26857258 -172772892 - LTR43 LTR ERV1 -309 293 180 660 271 48 33 chr5 26857509 26857719 -172772431 - MER58A DNA MER1_type -10 214 2 1465 198 13 48 chr5 26859235 26859687 -172770463 + MLT1D LTR MaLR 1 505 0 2264 239 42 16 chr5 26859870 26860418 -172769732 - REP3 LTR ERV 0 562 1 21 0 0 0 chr5 26861426 26861447 -172768703 + AT_rich Low_complexity Low_complexity 1 21 0 2837 191 62 7 chr5 26862036 26862602 -172767548 - Tigger1 DNA MER2_type -1821 597 1 342 264 125 7 chr5 26862603 26862747 -172767403 + L1MA6 LINE L1 3048 3208 -4357 1477 207 41 32 chr5 26862807 26863150 -172767000 - MER4D LTR ERV1 -12 891 546 576 198 0 86 chr5 26863147 26863206 -172766944 - MER4E LTR ERV1 -588 284 222 * 2097 122 0 0 chr5 26863206 26863500 -172766650 + AluSg SINE Alu 1 294 -16 576 198 0 86 chr5 26863500 26863633 -172766517 - MER4E LTR ERV1 -650 222 1 4460 223 45 17 chr5 26863662 26865177 -172764973 + L1MA6 LINE L1 3281 4846 -2719 4530 182 43 24 chr5 26865277 26867072 -172763078 + L1MA6 LINE L1 5704 7539 -180 774 32 0 0 chr5 26867943 26868036 -172762114 + (TA)n Simple_repeat Simple_repeat 1 93 0 34 79 0 0 chr5 26868252 26868328 -172761822 + AT_rich Low_complexity Low_complexity 1 76 0 1982 129 7 0 chr5 26869308 26869602 -172760548 - AluSq SINE Alu -17 296 1 1784 185 48 43 chr5 26869718 26870279 -172759871 + MLT2A2 LTR ERVL 1 554 0 32 43 0 0 chr5 26870336 26870382 -172759768 + AT_rich Low_complexity Low_complexity 1 46 0 289 270 14 0 chr5 26870685 26870759 -172759391 + L1MC4a LINE L1 6642 6716 -1092 305 280 118 40 chr5 26870785 26871571 -172758579 + L1MC5 LINE L1 6780 7470 -492 6012 150 39 34 chr5 26871842 26872242 -172757908 + Tigger3b DNA MER2_type 3 400 -2628 2217 66 0 21 chr5 26872242 26872557 -172757593 - AluY SINE Alu 0 309 1 6012 150 39 34 chr5 26872557 26872861 -172757289 + Tigger3b DNA MER2_type 400 701 -2327 1907 142 3 3 chr5 26872861 26873156 -172756994 + AluSx SINE Alu 1 295 -17 6012 150 39 34 chr5 26873156 26873670 -172756480 + Tigger3b DNA MER2_type 701 1230 -1 198 103 0 0 chr5 26873670 26873699 -172756451 + (GA)n Simple_repeat Simple_repeat 2 30 0 3094 206 16 6 chr5 26874328 26875016 -172755134 + L1M4 LINE L1 5069 5763 -1802 1876 178 40 9 chr5 26875018 26875367 -172754783 + THE1B LTR MaLR 3 362 -2 7653 128 17 0 chr5 26875369 26876502 -172753648 + THE1B-int LTR MaLR 1 1152 -428 3454 196 34 17 chr5 26876534 26877635 -172752515 + L1M2 LINE L1 5968 7086 -645 917 91 68 0 chr5 26877646 26877778 -172752372 - MSTA LTR MaLR -287 141 1 540 278 66 26 chr5 26877788 26878015 -172752135 + MERVL LTR ERVL 931 1166 -3830 414 257 38 9 chr5 26878044 26878149 -172752001 + MERVL LTR ERVL 1219 1326 -3670 295 373 0 0 chr5 26878223 26878341 -172751809 + MERVL LTR ERVL 2979 3096 -2389 1592 199 10 20 chr5 26878424 26878730 -172751420 - AluJb SINE Alu -9 303 1 60 27 0 0 chr5 26878908 26878982 -172751168 + AT_rich Low_complexity Low_complexity 1 74 0 711 283 61 36 chr5 26878982 26879426 -172750724 + L1M4 LINE L1 5792 6252 -1313 362 340 123 8 chr5 26879813 26880048 -172750102 - MLT1I LTR MaLR -147 262 1 891 202 6 0 chr5 26881853 26882021 -172748129 - AluJb SINE Alu -8 304 136 224 220 9 37 chr5 26883392 26883501 -172746649 + (TTAA)n Simple_repeat Simple_repeat 4 109 0 300 281 35 53 chr5 26884129 26884243 -172745907 - MIR SINE MIR 0 262 151 3847 15 0 18 chr5 26884244 26884743 -172745407 + L1PA2 LINE L1 5706 6155 0 495 276 181 26 chr5 26884853 26885085 -172745065 + LTR33 LTR ERVL 4 271 -250 2057 138 3 0 chr5 26885566 26885856 -172744294 - AluSx SINE Alu -21 291 1 281 241 35 46 chr5 26886252 26886339 -172743811 + MER5A DNA MER1_type 102 187 -2 2006 229 26 9 chr5 26886650 26887069 -172743081 + MLT2B3 LTR ERVL 1 426 -128 933 169 18 0 chr5 26887074 26887240 -172742910 + MLT1A1 LTR MaLR 197 365 0 233 260 0 0 chr5 26889042 26889092 -172741058 + CT-rich Low_complexity Low_complexity 1 50 0 279 308 42 25 chr5 26889117 26889237 -172740913 - L1MC4 LINE L1 -364 7678 7557 32 0 0 0 chr5 26889244 26889276 -172740874 + AT_rich Low_complexity Low_complexity 1 32 0 1590 202 39 30 chr5 26889674 26890035 -172740115 - MLT1A1 LTR MaLR 0 365 2 1360 346 114 11 chr5 26890770 26891769 -172738381 + L2 LINE L2 1820 2921 -393 722 265 89 22 chr5 26891897 26892267 -172737883 - LTR37B LTR ERV1 -73 395 1 2320 73 0 0 chr5 26993787 26994118 -172636032 - AluY SINE Alu 0 331 1 717 152 109 0 chr5 26994356 26994521 -172635629 + MSTA LTR MaLR 1 183 -245 7850 215 16 20 chr5 26994641 26996707 -172633443 + L1M1 LINE L1 3502 5564 -2001 278 323 43 59 chr5 26996871 26997057 -172633093 - MER91B DNA MER1_type -5 185 3 1614 211 79 15 chr5 26997069 26997472 -172632678 + MSTB1 LTR MaLR 1 429 -3 29 28 0 0 chr5 26997836 26997872 -172632278 + AT_rich Low_complexity Low_complexity 1 36 0 2119 168 59 18 chr5 26998069 26998573 -172631577 - MLT2A2 LTR ERVL 0 554 1 635 103 211 0 chr5 26999024 26999209 -172630941 - AluSp SINE Alu -2 311 88 812 231 119 130 chr5 26999503 27000244 -172629906 + L1ME1 LINE L1 5404 6043 -123 31 0 0 0 chr5 27002003 27002034 -172628116 + AT_rich Low_complexity Low_complexity 1 31 0 464 370 63 22 chr5 27002230 27002641 -172627509 + LTR16A LTR ERVL 23 450 0 274 296 0 34 chr5 27003177 27003265 -172626885 - MIR SINE MIR -4 258 174 21 0 0 0 chr5 27003825 27003846 -172626304 + AT_rich Low_complexity Low_complexity 1 21 0 1782 153 58 9 chr5 27005385 27005712 -172624438 - MER61A LTR ERV1 0 343 1 30 45 0 0 chr5 27006519 27006563 -172623587 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr5 27007337 27007359 -172622791 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 27007876 27007907 -172622243 + AT_rich Low_complexity Low_complexity 1 31 0 1653 87 0 0 chr5 27007924 27008142 -172622008 + AluY SINE Alu 92 309 -2 877 168 5 92 chr5 27008496 27008692 -172621458 + AluJb SINE Alu 1 179 -133 387 0 0 0 chr5 27008700 27008743 -172621407 + (TG)n Simple_repeat Simple_repeat 2 44 0 367 304 20 17 chr5 27008828 27009078 -172621072 + GA-rich Low_complexity Low_complexity 1 250 0 222 230 0 44 chr5 27009101 27009236 -172620914 + GA-rich Low_complexity Low_complexity 1 129 0 380 291 64 64 chr5 27009414 27009648 -172620502 - MLT1J2 LTR MaLR -201 249 16 330 328 16 0 chr5 27009782 27009907 -172620243 - MIR SINE MIR -12 250 124 356 217 26 72 chr5 27011115 27011267 -172618883 - MIR SINE MIR -31 231 87 2963 250 38 46 chr5 27011298 27012372 -172617778 + L1PA12 LINE L1 610 2326 -5258 3583 259 28 26 chr5 27012693 27013205 -172616945 + ERVL LTR ERVL 2419 2935 -2829 3042 80 27 18 chr5 27013205 27013600 -172616550 + MLT2A1 LTR ERVL 1 402 -42 312 70 0 0 chr5 27013600 27013643 -172616507 + (TG)n Simple_repeat Simple_repeat 2 44 0 3042 80 27 18 chr5 27013643 27013687 -172616463 + MLT2A1 LTR ERVL 402 444 0 3583 259 28 26 chr5 27013687 27014163 -172615987 + ERVL LTR ERVL 2935 3409 -2355 908 233 29 40 chr5 27014586 27014861 -172615289 + L1M4 LINE L1 734 1005 -5854 1646 229 51 39 chr5 27014869 27015437 -172614713 + L1M4 LINE L1 4303 4877 -2080 300 300 105 9 chr5 27015913 27016123 -172614027 - L1ME LINE L1 -3168 4397 4168 227 319 11 21 chr5 27017253 27017347 -172612803 - L1ME LINE L1 -5941 1614 1522 701 190 22 49 chr5 27017930 27018114 -172612036 - MER53 DNA DNA 0 189 11 26 30 0 0 chr5 27018427 27018460 -172611690 + AT_rich Low_complexity Low_complexity 1 33 0 182 321 47 19 chr5 27018952 27019058 -172611092 + L2 LINE L2 2929 3037 -276 13016 189 107 19 chr5 27019483 27022395 -172607755 - L1M4 LINE L1 -4382 3183 15 25 31 0 0 chr5 27022471 27022503 -172607647 + AT_rich Low_complexity Low_complexity 1 32 0 1986 116 10 23 chr5 27022511 27022813 -172607337 - AluSp SINE Alu -15 298 1 1023 253 55 62 chr5 27023496 27024432 -172605718 + L1ME LINE L1 1581 4440 -2517 512 297 46 10 chr5 27024424 27024642 -172605508 + L1ME LINE L1 6157 6381 -620 * 426 251 31 9 chr5 27024645 27024790 -172605360 + L1ME LINE L1 6447 6595 -394 1943 145 62 28 chr5 27025461 27025813 -172604337 + THE1B LTR MaLR 1 364 0 2240 84 7 3 chr5 27026014 27026312 -172603838 + AluSp SINE Alu 1 299 -14 4760 172 6 42 chr5 27026427 27028233 -172601917 - L1PA6 LINE L1 0 6154 4409 376 203 0 0 chr5 27028258 27028337 -172601813 + L1M4b LINE L1 5150 5228 -1729 198 277 50 50 chr5 27028543 27028644 -172601506 - MIR SINE MIR -110 152 52 333 0 0 0 chr5 27028786 27028823 -172601327 + (TG)n Simple_repeat Simple_repeat 1 37 0 26 0 0 0 chr5 27028907 27028933 -172601217 + AT_rich Low_complexity Low_complexity 1 26 0 27 39 0 19 chr5 27029047 27029072 -172601078 + AT_rich Low_complexity Low_complexity 1 25 -26 1854 141 7 7 chr5 27029072 27029363 -172600787 - AluSp SINE Alu -22 291 1 27 39 0 19 chr5 27029363 27029389 -172600761 + AT_rich Low_complexity Low_complexity 25 51 0 762 249 30 6 chr5 27029627 27029865 -172600285 + L1ME2 LINE L1 5712 5905 -259 190 373 49 20 chr5 27030219 27030321 -172599829 - L2 LINE L2 -4 3268 3164 22 35 0 0 chr5 27030346 27030375 -172599775 + AT_rich Low_complexity Low_complexity 1 29 0 1649 225 11 3 chr5 27031318 27031678 -172598472 - MLT1A1 LTR MaLR -2 363 1 318 304 87 72 chr5 27032890 27033056 -172597094 + L2 LINE L2 2538 2711 -603 180 0 0 0 chr5 27033056 27033076 -172597074 + (CA)n Simple_repeat Simple_repeat 1 20 0 318 304 87 72 chr5 27033076 27033185 -172596965 + L2 LINE L2 2711 2817 -497 34 24 0 0 chr5 27034411 27034452 -172595698 + AT_rich Low_complexity Low_complexity 1 41 0 7706 212 20 33 chr5 27034548 27037189 -172592961 - L1P5 LINE L1 -660 5491 2966 2501 248 88 3 chr5 27037673 27038423 -172591727 - L1ME1 LINE L1 -23 6143 5330 47 0 0 0 chr5 27038439 27038486 -172591664 + AT_rich Low_complexity Low_complexity 1 47 0 1613 236 54 58 chr5 27038486 27038988 -172591162 - L1ME1 LINE L1 -826 5320 4820 1977 168 31 11 chr5 27038988 27039345 -172590805 + THE1B LTR MaLR 1 364 0 1613 236 54 58 chr5 27039345 27039494 -172590656 - L1ME1 LINE L1 -1326 4820 4672 2584 211 50 13 chr5 27039662 27040277 -172589873 + L1MD2 LINE L1 5396 6033 -326 180 0 0 0 chr5 27041027 27041047 -172589103 + (T)n Simple_repeat Simple_repeat 1 20 0 267 133 0 0 chr5 27042108 27042153 -172587997 + (TG)n Simple_repeat Simple_repeat 1 45 0 963 235 98 15 chr5 27042172 27042490 -172587660 + L1MB7 LINE L1 5831 6174 -10 462 79 0 0 chr5 27043902 27043965 -172586185 + (TA)n Simple_repeat Simple_repeat 1 63 0 1532 132 0 0 chr5 27044063 27044303 -172585847 - AluSq SINE Alu 0 307 68 210 358 132 48 chr5 27046437 27047102 -172583048 + L2 LINE L2 1616 2336 -978 4373 177 18 55 chr5 27048999 27050091 -172580059 - L1MB1 LINE L1 -1 6167 5096 1155 204 11 8 chr5 27050087 27050347 -172579803 + L1 LINE L1 4410 4670 -1476 * 1510 191 54 26 chr5 27050517 27050867 -172579283 - THE1B LTR MaLR -4 360 1 8447 162 22 40 chr5 27050867 27052474 -172577676 - THE1B-int LTR MaLR -1 1579 3 1450 177 75 39 chr5 27052476 27052838 -172577312 - THE1C LTR MaLR 0 375 1 424 224 9 28 chr5 27053218 27053325 -172576825 + AluSp SINE Alu 1 105 -198 292 288 36 9 chr5 27053749 27053860 -172576290 + MLT1J1 LTR MaLR 55 168 -278 1035 236 65 96 chr5 27054807 27055063 -172575087 + MLT2B1 LTR ERVL 3 265 -255 195 42 0 0 chr5 27055063 27055087 -172575063 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1035 236 65 96 chr5 27055087 27055312 -172574838 + MLT2B1 LTR ERVL 265 469 -51 521 15 15 0 chr5 27055312 27055378 -172574772 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 1035 236 65 96 chr5 27055378 27055429 -172574721 + MLT2B1 LTR ERVL 469 520 0 226 267 78 33 chr5 27057163 27057253 -172572897 - MLT1I LTR MaLR -243 166 73 189 0 0 0 chr5 27058756 27058777 -172571373 + (T)n Simple_repeat Simple_repeat 1 21 0 6688 139 14 10 chr5 27059148 27060828 -172569322 - L1MA2 LINE L1 0 6304 4619 1554 171 3 52 chr5 27061920 27062229 -172567921 - AluJo SINE Alu -18 294 1 21 0 0 0 chr5 27062682 27062703 -172567447 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr5 27062713 27062748 -172567402 + (TC)n Simple_repeat Simple_repeat 2 36 0 384 119 0 0 chr5 27062789 27062848 -172567302 + (TA)n Simple_repeat Simple_repeat 1 59 0 2068 135 3 3 chr5 27063388 27063684 -172566466 + AluSx SINE Alu 1 296 -16 337 349 46 46 chr5 27064785 27065003 -172565147 + MIR SINE MIR 45 262 0 263 49 24 0 chr5 27065216 27065257 -172564893 + (TA)n Simple_repeat Simple_repeat 1 42 0 4280 82 15 0 chr5 27065257 27065856 -172564294 - L1PA4 LINE L1 -19 6136 5529 1016 256 43 75 chr5 27066073 27066538 -172563612 + MLT1D LTR MaLR 3 452 -53 25 0 0 0 chr5 27067328 27067353 -172562797 + AT_rich Low_complexity Low_complexity 1 25 0 1829 213 22 25 chr5 27067602 27068049 -172562101 + L1PA13 LINE L1 1615 2060 -4727 1328 175 12 4 chr5 27068046 27068292 -172561858 - THE1C-int LTR MaLR -1330 250 3 * 1704 167 58 25 chr5 27068296 27068655 -172561495 - THE1C LTR MaLR -4 371 1 2417 208 10 4 chr5 27068655 27069170 -172560980 + L1PA13 LINE L1 2546 3063 -3734 4511 104 23 0 chr5 27069173 27069834 -172560316 + L1PA12 LINE L1 5260 5935 -233 1164 153 0 5 chr5 27069890 27070079 -172560071 - L1PA11 LINE L1 -37 6137 5950 561 170 6 132 chr5 27070087 27070147 -172560003 - MIR SINE MIR -92 170 104 2793 6 0 3 chr5 27070147 27070459 -172559691 + AluYa5 SINE Alu 1 311 0 561 170 6 132 chr5 27070459 27070557 -172559593 - MIR SINE MIR -158 104 32 21 57 0 0 chr5 27070627 27070662 -172559488 + AT_rich Low_complexity Low_complexity 1 35 0 1180 243 0 18 chr5 27071655 27071935 -172558215 + MLT1A1 LTR MaLR 80 354 -11 805 85 31 0 chr5 27071953 27072083 -172558067 + (GAAA)n Simple_repeat Simple_repeat 2 135 0 417 339 90 25 chr5 27072151 27072428 -172557722 - L2 LINE L2 -1630 1684 1390 328 162 176 0 chr5 27073039 27073107 -172557043 - MADE1 DNA Mariner 0 80 1 22 35 0 0 chr5 27073113 27073142 -172557008 + AT_rich Low_complexity Low_complexity 1 29 0 2102 112 0 0 chr5 27073189 27073513 -172556637 - AluSq SINE Alu 0 324 1 1805 177 33 30 chr5 27073942 27074304 -172555846 - Tigger2a DNA MER2_type -71 363 1 1196 190 65 74 chr5 27074304 27074640 -172555510 + MLT1B LTR MaLR 58 390 0 1718 139 0 21 chr5 27074872 27075153 -172554997 + AluSc SINE Alu 3 277 -32 360 64 0 0 chr5 27075153 27075200 -172554950 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 2071 112 0 10 chr5 27075243 27075537 -172554613 + AluSx SINE Alu 4 294 -18 465 19 0 0 chr5 27075537 27075591 -172554559 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 669 226 64 29 chr5 27075863 27076067 -172554083 - MLT1D LTR MaLR -2 503 293 5272 48 0 0 chr5 27076279 27076923 -172553227 + L1PA5 LINE L1 5503 6146 -8 21 36 0 0 chr5 27076923 27076951 -172553199 + AT_rich Low_complexity Low_complexity 1 28 0 453 36 0 0 chr5 27077216 27077271 -172552879 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 459 293 7 0 chr5 27077802 27077949 -172552201 - MER110 LTR ERV1 -12 479 332 24 0 0 0 chr5 27077949 27077973 -172552177 + AT_rich Low_complexity Low_complexity 1 24 0 663 311 44 7 chr5 27078059 27078332 -172551818 - Charlie2 DNA MER1_type -2155 627 345 432 230 69 49 chr5 27078356 27078560 -172551590 - LTR37B LTR ERV1 -11 457 250 209 133 0 67 chr5 27078611 27078656 -172551494 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2279 60 43 7 chr5 27078848 27079148 -172551002 - AluY SINE Alu 0 311 1 304 209 48 19 chr5 27079162 27079267 -172550883 - L1MD3 LINE L1 -8 7987 7880 * 673 273 25 50 chr5 27079265 27079507 -172550643 + L1MD3 LINE L1 6742 6977 -1018 184 273 0 0 chr5 27079838 27079882 -172550268 - L2 LINE L2 -7 3306 3263 23 33 0 0 chr5 27080496 27080526 -172549624 + AT_rich Low_complexity Low_complexity 1 30 0 216 277 107 36 chr5 27080979 27081091 -172549059 - L2 LINE L2 -302 2970 2851 7464 31 0 0 chr5 27081160 27082627 -172547523 - L1PA4 LINE L1 0 6155 4686 8582 22 1 0 chr5 27082627 27083636 -172546514 + L1PA4 LINE L1 3698 4707 -1439 3442 34 0 0 chr5 27084080 27084493 -172545657 + L1PA4 LINE L1 5738 6150 -5 1130 211 0 38 chr5 27085463 27085724 -172544426 - MLT1D LTR MaLR -1 504 254 1376 164 55 8 chr5 27085747 27086003 -172544147 + AluJb SINE Alu 1 268 -44 189 0 0 0 chr5 27086054 27086075 -172544075 + (TAA)n Simple_repeat Simple_repeat 1 21 0 941 242 4 37 chr5 27086075 27086319 -172543831 - MLT1D LTR MaLR -388 238 3 362 306 45 65 chr5 27087129 27087485 -172542665 - L1MC4 LINE L1 0 8042 7694 1668 187 167 8 chr5 27087547 27087906 -172542244 - MSTA LTR MaLR -11 417 2 5313 204 8 20 chr5 27087907 27088975 -172541175 - MSTA-int LTR MaLR 0 1580 526 782 268 93 12 chr5 27088986 27089415 -172540735 + L1ME1 LINE L1 4771 5234 -912 4537 169 72 5 chr5 27089417 27090247 -172539903 + MER4D LTR ERV1 1 886 -17 1314 264 124 60 chr5 27090373 27091172 -172538978 + L1ME1 LINE L1 5312 6161 -5 379 261 49 21 chr5 27091434 27091576 -172538574 + MER4E LTR ERV1 327 472 -307 264 256 12 24 chr5 27091746 27091828 -172538322 + MIR SINE MIR 177 257 -5 450 114 0 0 chr5 27092239 27092309 -172537841 + (CA)n Simple_repeat Simple_repeat 2 71 0 894 202 30 20 chr5 27093178 27093376 -172536774 + MER3 DNA MER1_type 5 204 -5 597 261 96 43 chr5 27093835 27093902 -172536248 + MER110 LTR ERV1 166 228 -263 2355 90 3 0 chr5 27093902 27094201 -172535949 - AluSc SINE Alu -9 300 1 597 261 96 43 chr5 27094201 27094436 -172535714 + MER110 LTR ERV1 228 484 -7 1942 123 97 32 chr5 27095616 27095958 -172534192 - THE1B LTR MaLR 0 364 1 337 276 0 35 chr5 27096038 27096125 -172534025 - L2 LINE L2 -3 3310 3227 472 134 0 0 chr5 27096286 27096353 -172533797 + AluSg/x SINE Alu 217 283 -26 183 24 49 49 chr5 27096357 27096398 -172533752 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 278 344 16 49 chr5 27096931 27097053 -172533097 + L2 LINE L2 3144 3261 -11 1426 218 0 10 chr5 27097106 27097399 -172532751 - AluJo SINE Alu -21 291 2 311 149 0 0 chr5 27097644 27097691 -172532459 - L1MA6 LINE L1 -192 6108 6062 22 70 0 0 chr5 27098566 27098609 -172531541 + AT_rich Low_complexity Low_complexity 1 43 0 260 213 25 12 chr5 27098684 27098764 -172531386 - HAL1b LINE L1 -2 1346 1266 305 174 116 0 chr5 27098935 27099021 -172531129 - L1MB3 LINE L1 -7 6176 6081 23 54 0 0 chr5 27099213 27099250 -172530900 + AT_rich Low_complexity Low_complexity 1 37 0 813 271 28 9 chr5 27099470 27099688 -172530462 - MER58A DNA MER1_type -2 222 1 403 269 215 0 chr5 27099786 27099916 -172530234 - MER63A DNA MER1_type 0 210 53 652 238 21 0 chr5 27100423 27100566 -172529584 + AluJb SINE Alu 164 309 -3 279 350 96 0 chr5 27100943 27101120 -172529030 - LTR33 LTR ERVL -2 519 326 373 336 7 20 chr5 27101217 27101366 -172528784 - LTR33 LTR ERVL -374 147 1 447 204 11 0 chr5 27102475 27102563 -172527587 - MER72 LTR ERV1 -9 713 625 2618 84 24 50 chr5 27102563 27102682 -172527468 + L1PB1 LINE L1 5372 5493 -658 2105 113 0 0 chr5 27102682 27102990 -172527160 + AluY SINE Alu 1 308 0 2618 84 24 50 chr5 27102990 27103286 -172526864 + L1PB1 LINE L1 5493 5777 -374 312 27 0 0 chr5 27103291 27103328 -172526822 + (CA)n Simple_repeat Simple_repeat 2 38 0 271 265 66 0 chr5 27103738 27103904 -172526246 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 202 186 57 0 chr5 27103904 27104044 -172526106 + (TA)n Simple_repeat Simple_repeat 1 148 0 1549 73 0 0 chr5 27104044 27104249 -172525901 + L1PB1 LINE L1 5782 5986 -165 278 68 0 0 chr5 27104250 27104294 -172525856 + L1PB1 LINE L1 6104 6147 -4 25 0 0 0 chr5 27104297 27104322 -172525828 + AT_rich Low_complexity Low_complexity 1 25 0 252 325 76 25 chr5 27104460 27104617 -172525533 - MIR SINE MIR -19 243 79 282 240 31 61 chr5 27104993 27105066 -172525084 + MLT1J LTR MaLR 64 133 -317 2472 123 3 6 chr5 27105066 27105431 -172524719 - THE1B LTR MaLR 0 364 1 282 240 31 61 chr5 27105431 27105455 -172524695 + MLT1J LTR MaLR 133 156 -294 2832 268 82 21 chr5 27105503 27106581 -172523569 + L1MCb LINE L1 1 1143 -4902 2672 248 154 24 chr5 27106583 27106709 -172523441 + L1MD3 LINE L1 5186 4432 -1714 2216 76 13 3 chr5 27106709 27107010 -172523140 + AluY SINE Alu 1 304 -7 2672 248 154 24 chr5 27107010 27108117 -172522033 + L1MD3 LINE L1 4431 5392 -754 2439 202 87 25 chr5 27108112 27108746 -172521404 + L1MC3 LINE L1 7094 7766 -19 * 239 340 102 30 chr5 27108855 27109052 -172521098 + MLT1J2 LTR MaLR 240 450 0 270 207 92 46 chr5 27109228 27109315 -172520835 - L2 LINE L2 -41 3231 3141 1836 86 4 22 chr5 27109585 27109854 -172520296 + AluSg1 SINE Alu 1 264 -45 24 53 0 0 chr5 27110670 27110708 -172519442 + AT_rich Low_complexity Low_complexity 1 38 0 607 299 36 25 chr5 27110837 27111115 -172519035 - L1ME3A LINE L1 -5 6960 6680 263 264 50 8 chr5 27111152 27111273 -172518877 - L1ME3A LINE L1 -590 6375 6250 1258 200 67 41 chr5 27111341 27111679 -172518471 - THE1C LTR MaLR -24 402 1 8855 151 30 36 chr5 27111679 27113266 -172516884 - THE1C-int LTR MaLR -1 1579 3 1641 176 46 30 chr5 27113268 27113637 -172516513 - THE1C LTR MaLR 0 375 1 472 333 41 35 chr5 27113687 27114056 -172516094 - L1ME3A LINE L1 -795 6146 5776 2252 90 0 7 chr5 27114056 27114357 -172515793 - AluY SINE Alu 0 311 13 450 250 0 0 chr5 27114376 27114464 -172515686 - Tigger7 DNA MER2_type 0 2491 2404 2428 216 31 12 chr5 27114466 27114979 -172515171 - Tigger7 DNA MER2_type -1964 523 1 291 300 84 43 chr5 27114979 27115118 -172515032 - L1ME3A LINE L1 -1175 5766 5634 2261 83 0 13 chr5 27115118 27115418 -172514732 - AluY SINE Alu -15 296 1 291 300 84 43 chr5 27115418 27115601 -172514549 - L1ME3A LINE L1 -1307 5634 5431 209 119 24 0 chr5 27115610 27115652 -172514498 + CT-rich Low_complexity Low_complexity 2 44 0 330 26 0 0 chr5 27115652 27115691 -172514459 + (CA)n Simple_repeat Simple_repeat 1 39 0 598 284 124 42 chr5 27115870 27116297 -172513853 - L1ME3A LINE L1 -1731 5210 4819 2060 91 14 0 chr5 27116297 27116593 -172513557 - L1PA13 LINE L1 -19 6144 5845 598 284 124 42 chr5 27116593 27116925 -172513225 - L1ME3A LINE L1 -2122 4819 4389 3256 214 36 37 chr5 27117027 27117919 -172512231 - L1MB5 LINE L1 -8 6166 5276 264 160 0 0 chr5 27117914 27117964 -172512186 - L1ME3A LINE L1 -4996 1947 1898 * 325 317 107 4 chr5 27118058 27118339 -172511811 - L1M4 LINE L1 -3175 2971 2662 180 224 0 86 chr5 27119174 27119232 -172510918 + MIR3 SINE MIR 112 164 -44 480 269 60 60 chr5 27119460 27119743 -172510407 - L1MB5 LINE L1 -1210 4936 4654 301 293 9 9 chr5 27120069 27120185 -172509965 - L1ME3A LINE L1 -6226 197 82 324 48 0 0 chr5 27120725 27120767 -172509383 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 372 298 32 25 chr5 27120846 27121004 -172509146 - MIR SINE MIR -3 259 101 650 249 58 40 chr5 27121045 27121266 -172508884 - MER20 DNA MER1_type 0 219 1 361 245 125 42 chr5 27122720 27122872 -172507278 - L1MC5 LINE L1 -45 7916 7743 1385 203 7 42 chr5 27122872 27123178 -172506972 + AluJb SINE Alu 1 295 -17 361 245 125 42 chr5 27123178 27123217 -172506933 - L1MC5 LINE L1 -218 7743 7709 266 194 14 0 chr5 27123449 27123521 -172506629 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 1653 258 100 21 chr5 27123541 27124267 -172505883 - L1ME2 LINE L1 -120 6324 5542 509 383 17 14 chr5 27124365 27124710 -172505440 + LTR16A LTR ERVL 105 450 0 423 231 103 0 chr5 27124913 27125030 -172505120 + MLT1H1 LTR MaLR 427 555 0 1026 297 93 48 chr5 27125034 27125892 -172504258 - L1ME2 LINE L1 -3006 3420 2602 2781 175 23 17 chr5 27125892 27126413 -172503737 + MER1A DNA MER1_type 1 524 -3 1026 297 93 48 chr5 27126413 27127546 -172502604 - L1ME2 LINE L1 -3824 2602 1171 209 238 63 0 chr5 27127619 27127682 -172502468 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 2164 224 76 39 chr5 27127939 27128496 -172501654 - L1MC2 LINE L1 -195 6429 5894 2069 148 39 20 chr5 27128496 27128853 -172501297 - THE1B LTR MaLR 0 364 1 11339 95 9 2 chr5 27128853 27130422 -172499728 - THE1B-int LTR MaLR 0 1580 1 1815 167 39 25 chr5 27130422 27130781 -172499369 - THE1B LTR MaLR 0 364 1 2164 224 76 39 chr5 27130781 27130932 -172499218 - L1MC2 LINE L1 -729 5895 5693 1478 157 111 98 chr5 27130929 27131408 -172498742 - L1MCa LINE L1 -4944 1482 998 * 1107 220 68 114 chr5 27131416 27131811 -172498339 + MSTD LTR MaLR 20 396 0 3834 187 54 67 chr5 27131811 27132774 -172497376 - L1MCa LINE L1 -5429 997 47 578 239 24 6 chr5 27132795 27132962 -172497188 - L1MC2 LINE L1 -917 5707 5538 584 271 109 57 chr5 27133068 27133452 -172496698 - L1MC2 LINE L1 -5995 431 28 453 347 50 48 chr5 27133518 27134019 -172496131 - L1M4 LINE L1 -1313 4833 4332 233 307 85 20 chr5 27134139 27134292 -172495858 - L1M4 LINE L1 -1954 4192 4030 5991 72 0 0 chr5 27334569 27335390 -172294760 - L1PA7 LINE L1 -2 6152 5328 216 67 0 0 chr5 27335479 27335509 -172294641 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 255 103 0 0 chr5 27336937 27336976 -172293174 + (CA)n Simple_repeat Simple_repeat 2 40 0 285 169 28 45 chr5 27337264 27337442 -172292708 + CT-rich Low_complexity Low_complexity 5 179 0 301 248 88 29 chr5 27337442 27337579 -172292571 - L1M2 LINE L1 -4028 2821 2677 362 308 178 30 chr5 27337585 27337955 -172292195 - HAL1 LINE L1 -1207 1300 876 404 344 73 9 chr5 27339093 27339311 -172290839 + MIR SINE MIR 21 252 -10 371 323 68 68 chr5 27339391 27339639 -172290511 + LTR33 LTR ERVL 12 259 -262 257 305 12 0 chr5 27339714 27339796 -172290354 + LTR33 LTR ERVL 370 452 -69 442 288 23 0 chr5 27340087 27340219 -172289931 - MLT1H LTR MaLR -4 545 411 587 264 82 30 chr5 27340301 27340536 -172289614 - MLT1H LTR MaLR -261 288 1 590 13 53 0 chr5 27340862 27340938 -172289212 - L1PA4 LINE L1 -2 6153 6074 267 393 0 0 chr5 27341225 27341309 -172288841 - L2 LINE L2 -38 3234 3151 6060 173 10 14 chr5 27341590 27343704 -172286446 + L1MA3 LINE L1 4190 6305 0 25 31 0 0 chr5 27343708 27343740 -172286410 + AT_rich Low_complexity Low_complexity 1 32 0 292 109 0 36 chr5 27343832 27343887 -172286263 - L1MA10 LINE L1 -14 6320 6268 1360 217 4 0 chr5 27343887 27344117 -172286033 + MER8 DNA MER2_type 2 232 -7 207 69 0 0 chr5 27345293 27345322 -172284828 + (TG)n Simple_repeat Simple_repeat 1 29 0 225 304 0 0 chr5 27345512 27345591 -172284559 + L1MDa LINE L1 1636 1714 -4826 333 236 158 24 chr5 27345599 27345726 -172284424 - L1MCa LINE L1 -3215 3211 3068 21 36 0 0 chr5 27345838 27345866 -172284284 + AT_rich Low_complexity Low_complexity 1 28 0 600 243 61 43 chr5 27346023 27346484 -172283666 - L1MCa LINE L1 -3667 2759 2250 366 231 40 0 chr5 27346523 27346776 -172283374 + (TA)n Simple_repeat Simple_repeat 1 263 0 328 247 35 0 chr5 27346825 27346910 -172283240 + MLT1B LTR MaLR 256 343 -47 2420 272 66 24 chr5 27346911 27347049 -172283101 + L1M4 LINE L1 3117 3248 -2898 2116 96 3 20 chr5 27347049 27347391 -172282759 + AluSc SINE Alu 1 309 0 2420 272 66 24 chr5 27347391 27347465 -172282685 + L1M4 LINE L1 3248 3317 -2829 1919 203 40 26 chr5 27347465 27347738 -172282412 - MSTB1 LTR MaLR 0 432 149 1531 214 7 0 chr5 27347738 27348032 -172282118 + AluJb SINE Alu 1 296 -16 1919 203 40 26 chr5 27348032 27348181 -172281969 - MSTB1 LTR MaLR -283 149 4 2420 272 66 24 chr5 27348181 27349085 -172281065 + L1M4 LINE L1 3317 4281 -1865 1192 126 16 0 chr5 27349076 27349266 -172280884 + L1P5 LINE L1 5410 5602 -549 * 5758 125 12 3 chr5 27349373 27350268 -172279882 + L1PA10 LINE L1 5262 6164 -4 462 262 90 0 chr5 27351005 27351150 -172279000 - MIR SINE MIR -34 228 71 214 361 92 17 chr5 27352234 27352353 -172277797 + MIR SINE MIR 14 141 -121 400 252 8 53 chr5 27352456 27352587 -172277563 + MIR SINE MIR 135 259 -3 23 86 0 0 chr5 27353248 27353306 -172276844 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr5 27353838 27353860 -172276290 + AT_rich Low_complexity Low_complexity 1 22 0 2375 75 7 0 chr5 27354316 27354623 -172275527 - AluY SINE Alu -2 309 1 436 272 40 8 chr5 27357664 27357789 -172272361 + L2 LINE L2 3185 3313 0 1373 243 65 29 chr5 27358167 27358615 -172271535 + MLT1C LTR MaLR 4 467 0 23 33 0 0 chr5 27358630 27358660 -172271490 + AT_rich Low_complexity Low_complexity 1 30 0 1903 161 77 48 chr5 27358784 27359200 -172270950 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 27359232 27359254 -172270896 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr5 27359835 27359877 -172270273 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 303 326 65 22 chr5 27360631 27360769 -172269381 + MIR SINE MIR 28 171 -91 1429 108 58 0 chr5 27360771 27361012 -172269138 + L1MA6 LINE L1 6040 6294 -6 454 239 181 32 chr5 27361478 27361633 -172268517 - MER5A DNA MER1_type 0 189 12 1579 162 54 40 chr5 27361971 27362341 -172267809 + THE1C LTR MaLR 1 375 0 1820 152 0 0 chr5 27362406 27362689 -172267461 - AluSq SINE Alu -30 283 1 380 111 0 0 chr5 27362713 27362767 -172267383 + MSTB LTR MaLR 2 55 -371 433 159 0 0 chr5 27362767 27362836 -172267314 - L1P LINE L1 -1152 4994 4926 * 1496 123 36 12 chr5 27362833 27363084 -172267066 + L1PA13 LINE L1 5887 6143 -20 1589 201 64 3 chr5 27363120 27363434 -172266716 + MSTB LTR MaLR 94 426 0 437 162 57 57 chr5 27363491 27363596 -172266554 - MLT1D LTR MaLR 0 505 401 279 0 0 0 chr5 27363738 27363769 -172266381 + (TG)n Simple_repeat Simple_repeat 2 32 0 2573 55 0 0 chr5 27365301 27365609 -172264541 - AluY SINE Alu -2 309 2 1811 146 71 31 chr5 27366120 27366443 -172263707 + MER1B DNA MER1_type 2 337 0 27 29 0 0 chr5 27367016 27367050 -172263100 + AT_rich Low_complexity Low_complexity 1 34 0 1771 295 36 14 chr5 27367084 27367585 -172262565 + MLT1F LTR MaLR 29 540 -2 205 248 18 0 chr5 27367794 27367907 -172262243 + (TA)n Simple_repeat Simple_repeat 2 116 0 222 128 0 0 chr5 27369028 27369067 -172261083 + (TG)n Simple_repeat Simple_repeat 2 40 0 242 384 18 0 chr5 27370274 27370386 -172259764 + MER81 DNA DNA 1 114 0 1468 256 39 18 chr5 27370450 27370938 -172259212 + MLT1D LTR MaLR 4 501 -4 2200 39 0 0 chr5 27371384 27371642 -172258508 + AluY SINE Alu 43 300 -11 685 228 57 24 chr5 27372497 27372708 -172257442 - MER39 LTR ERV1 -41 666 449 222 37 0 0 chr5 27372847 27372874 -172257276 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 814 149 0 0 chr5 27372874 27372988 -172257162 - AluJb SINE Alu -192 120 7 25 31 0 0 chr5 27373562 27373594 -172256556 + AT_rich Low_complexity Low_complexity 1 32 0 1288 170 140 8 chr5 27374578 27374843 -172255307 + AluJb SINE Alu 1 300 -2 247 301 166 5 chr5 27374878 27375071 -172255079 + MER46C DNA MER2_type 94 317 -21 250 340 60 10 chr5 27375227 27375327 -172254823 - MIR SINE MIR -81 181 77 1736 199 17 11 chr5 27376246 27376608 -172253542 - MLT1A1 LTR MaLR 0 365 2 1574 167 0 99 chr5 27376800 27377183 -172252967 - MER7A DNA MER2_type 0 346 4 356 167 26 13 chr5 27377205 27377283 -172252867 + MER67C LTR ERV1 595 673 -37 1156 144 18 52 chr5 27377860 27378089 -172252061 - Tigger2a DNA MER2_type -212 222 2 801 63 9 0 chr5 27378243 27378354 -172251796 + LTR22A LTR ERVK 1 112 -346 655 159 16 16 chr5 27378355 27378481 -172251669 - HERVK22 LTR ERVK -6631 206 81 3280 88 11 4 chr5 27378545 27378999 -172251151 - LTR22A LTR ERVK -1 457 1 219 261 0 0 chr5 27379134 27379180 -172250970 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 323 313 35 55 chr5 27379748 27379949 -172250201 - MIR3 SINE MIR 0 208 12 2042 115 4 4 chr5 27380020 27380328 -172249822 - AluSx SINE Alu 0 312 5 1032 225 0 0 chr5 27380620 27380833 -172249317 - L1PB4 LINE L1 -3 6153 5941 422 330 63 42 chr5 27381238 27381523 -172248627 - L2 LINE L2 -2 3311 3021 21 0 0 0 chr5 27381793 27381814 -172248336 + AT_rich Low_complexity Low_complexity 1 21 0 237 349 69 39 chr5 27381958 27382290 -172247860 - L2 LINE L2 -707 2607 2266 2568 53 0 0 chr5 27382293 27382597 -172247553 - AluY SINE Alu -7 304 1 186 373 45 0 chr5 27383229 27383296 -172246854 - L2 LINE L2 -50 3222 3153 588 314 106 16 chr5 27383492 27383795 -172246355 + L2 LINE L2 1299 1628 -1686 183 100 0 0 chr5 27383795 27383825 -172246325 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 1964 61 389 162 chr5 27383826 27384400 -172245750 + LTR12 LTR ERV1 8 711 -3 207 100 0 0 chr5 27384402 27384432 -172245718 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2046 127 7 3 chr5 27384433 27384732 -172245418 - AluSg SINE Alu -8 302 3 485 333 102 19 chr5 27384766 27385081 -172245069 + L2 LINE L2 1642 1982 -1332 495 313 142 16 chr5 27385082 27385398 -172244752 + L2 LINE L2 2185 2540 -774 261 0 0 0 chr5 27385401 27385430 -172244720 + (T)n Simple_repeat Simple_repeat 1 29 0 635 270 11 16 chr5 27385576 27385765 -172244385 - MLT1A2 LTR MaLR 0 374 187 315 0 0 0 chr5 27385768 27385803 -172244347 + (TG)n Simple_repeat Simple_repeat 2 36 0 860 199 42 0 chr5 27385812 27385978 -172244172 - MSTB LTR MaLR -15 411 239 242 220 0 0 chr5 27385984 27386034 -172244116 - MSTB-int LTR MaLR -188 1463 1414 1846 145 49 20 chr5 27386034 27386378 -172243772 + L1PB3 LINE L1 5799 6152 -2 6562 218 46 10 chr5 27386432 27387795 -172242355 - MSTB-int LTR MaLR -234 1417 6 1847 237 21 5 chr5 27387806 27388224 -172241926 - MSTB LTR MaLR 0 426 2 228 122 0 0 chr5 27388224 27388265 -172241885 + (TC)n Simple_repeat Simple_repeat 2 42 0 564 236 7 42 chr5 27388346 27388490 -172241660 - MLT1A2 LTR MaLR -226 139 1 190 333 39 13 chr5 27388608 27388686 -172241464 - L2 LINE L2 -12 3301 3222 198 0 0 0 chr5 27389324 27389346 -172240804 + (T)n Simple_repeat Simple_repeat 1 22 0 221 187 55 22 chr5 27389943 27390034 -172240116 + (TA)n Simple_repeat Simple_repeat 2 95 0 374 339 63 0 chr5 27391821 27392010 -172238140 + MLT1J2 LTR MaLR 12 212 -238 240 254 0 0 chr5 27392022 27392081 -172238069 + CT-rich Low_complexity Low_complexity 2 60 0 647 282 87 21 chr5 27393772 27394013 -172236137 + MIR SINE MIR 5 261 -1 246 270 67 11 chr5 27394068 27394157 -172235993 + L2 LINE L2 3220 3313 0 338 288 153 23 chr5 27394285 27394462 -172235688 + MIR SINE MIR 41 240 -22 269 185 7 40 chr5 27395226 27395377 -172234773 + (TA)n Simple_repeat Simple_repeat 2 147 0 236 325 60 0 chr5 27395400 27395483 -172234667 - L2 LINE L2 -44 3228 3141 2309 144 38 10 chr5 27395844 27396261 -172233889 + L1PB2 LINE L1 5721 6149 -2 2847 213 92 17 chr5 27396268 27396860 -172233290 + L1MC2 LINE L1 4309 4855 -1489 240 35 0 0 chr5 27396860 27396889 -172233261 + (CA)n Simple_repeat Simple_repeat 1 29 0 2847 213 92 17 chr5 27396889 27398179 -172231971 + L1MC2 LINE L1 4855 6335 -9 750 306 128 18 chr5 27398343 27398914 -172231236 + L1ME2 LINE L1 5316 5949 -215 228 111 0 0 chr5 27399452 27399488 -172230662 + (TA)n Simple_repeat Simple_repeat 1 36 0 1757 135 6 45 chr5 27399880 27400191 -172229959 + AluSx SINE Alu 1 299 -13 225 185 0 74 chr5 27401003 27401057 -172229093 + L2 LINE L2 3264 3313 0 1239 131 78 45 chr5 27401789 27402033 -172228117 - MSTC LTR MaLR -12 416 165 2538 101 14 8 chr5 27402036 27402394 -172227756 - THE1C LTR MaLR -15 360 1 785 193 33 0 chr5 27402394 27402540 -172227610 - MSTC LTR MaLR -277 151 1 2191 102 3 3 chr5 27403247 27403542 -172226608 + AluSp SINE Alu 5 299 -14 197 337 41 0 chr5 27403830 27403928 -172226222 + MIR SINE MIR 148 249 -13 21 71 0 0 chr5 27404256 27404298 -172225852 + AT_rich Low_complexity Low_complexity 1 42 0 1573 164 18 11 chr5 27404397 27404700 -172225450 + AluJo SINE Alu 16 312 0 30 45 0 0 chr5 27410615 27410659 -172219491 + AT_rich Low_complexity Low_complexity 1 44 0 2181 110 3 3 chr5 27411031 27411331 -172218819 + AluSg SINE Alu 7 306 -4 930 85 0 248 chr5 27411914 27411959 -172218191 + MSTC LTR MaLR 1 55 -373 495 0 0 0 chr5 27411959 27412014 -172218136 + (TTTTA)n Simple_repeat Simple_repeat 5 59 0 1771 107 69 4 chr5 27412014 27412276 -172217874 - AluSq SINE Alu -32 281 3 930 85 0 248 chr5 27412276 27412352 -172217798 + MSTC LTR MaLR 54 12 -416 2257 70 0 64 chr5 27412352 27412681 -172217469 + AluY SINE Alu 4 311 0 930 85 0 248 chr5 27412681 27412851 -172217299 + MSTC LTR MaLR 11 221 -207 189 0 0 0 chr5 27412918 27412939 -172217211 + (A)n Simple_repeat Simple_repeat 1 21 0 465 303 263 19 chr5 27413456 27413942 -172216208 + L2 LINE L2 2152 2756 -558 207 379 30 23 chr5 27414006 27414138 -172216012 + L2 LINE L2 2768 2900 -414 2432 63 0 0 chr5 27414401 27414700 -172215450 - AluY SINE Alu -12 299 1 302 122 51 31 chr5 27414878 27414976 -172215174 + (TA)n Simple_repeat Simple_repeat 2 101 0 25 0 0 0 chr5 27415523 27415548 -172214602 + AT_rich Low_complexity Low_complexity 1 25 0 532 338 101 0 chr5 27418283 27418511 -172211639 + MIR SINE MIR 6 256 -6 1646 218 48 10 chr5 27418829 27419224 -172210926 - LTR52 LTR ERVL -9 412 3 29 47 0 0 chr5 27419561 27419604 -172210546 + AT_rich Low_complexity Low_complexity 1 43 0 535 261 62 29 chr5 27420613 27420854 -172209296 + HAL1 LINE L1 1778 2026 -481 21 0 0 0 chr5 27420903 27420924 -172209226 + AT_rich Low_complexity Low_complexity 1 21 0 2091 131 26 0 chr5 27421332 27421637 -172208513 - AluSq SINE Alu 0 313 1 1602 156 7 41 chr5 27422242 27422572 -172207578 - AluJo SINE Alu 0 320 1 1559 336 84 37 chr5 27422657 27423939 -172206211 - L2 LINE L2 -7 3306 1978 215 260 10 21 chr5 27424210 27424306 -172205844 + (TTTAA)n Simple_repeat Simple_repeat 3 97 0 203 282 107 61 chr5 27425634 27425765 -172204385 - L3 LINE CR1 -227 1350 1214 22 0 0 0 chr5 27425904 27425926 -172204224 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr5 27426175 27426209 -172203941 + AT_rich Low_complexity Low_complexity 1 34 0 28 79 0 0 chr5 27426471 27426534 -172203616 + AT_rich Low_complexity Low_complexity 1 63 0 285 250 25 0 chr5 27427927 27428007 -172202143 + (TA)n Simple_repeat Simple_repeat 2 83 0 181 327 60 60 chr5 27428161 27428311 -172201839 + L2 LINE L2 3016 3165 -107 486 0 0 0 chr5 27428912 27428966 -172201184 + (TA)n Simple_repeat Simple_repeat 1 54 0 27 0 0 0 chr5 27429091 27429118 -172201032 + AT_rich Low_complexity Low_complexity 1 27 0 528 244 159 20 chr5 27429280 27429481 -172200669 + Charlie4 DNA MER1_type 3 231 -1730 242 282 51 8 chr5 27429573 27429690 -172200460 + Charlie4 DNA MER1_type 1840 1961 0 21 57 0 0 chr5 27430830 27430865 -172199285 + AT_rich Low_complexity Low_complexity 1 35 0 233 316 238 6 chr5 27431044 27431212 -172198938 + MIR SINE MIR 28 234 -28 198 0 0 0 chr5 27431964 27431986 -172198164 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 39 22 0 0 chr5 27432399 27432445 -172197705 + AT_rich Low_complexity Low_complexity 1 46 0 42 48 0 0 chr5 27433320 27433383 -172196767 + AT_rich Low_complexity Low_complexity 1 63 0 338 327 138 52 chr5 27433388 27433467 -172196683 + L1MC4a LINE L1 5264 5335 -2473 1707 231 26 22 chr5 27433467 27433930 -172196220 + MLT1C LTR MaLR 3 467 0 338 327 138 52 chr5 27433930 27434388 -172195762 + L1MC4a LINE L1 5335 5847 -1961 749 238 40 113 chr5 27434520 27434920 -172195230 - MLT1A2 LTR MaLR 0 374 4 1535 260 58 64 chr5 27437071 27437269 -172192881 + MLT1E2 LTR MaLR 1 199 -427 2221 89 4 0 chr5 27437269 27437550 -172192600 + AluSx SINE Alu 3 284 -28 1179 93 7 0 chr5 27437550 27437573 -172192577 + AluSq SINE Alu 3 307 0 1535 260 58 64 chr5 27437573 27438009 -172192141 + MLT1E2 LTR MaLR 199 626 0 459 294 157 0 chr5 27438152 27438305 -172191845 - MER5A DNA MER1_type -1 188 12 2297 80 0 10 chr5 27438601 27438903 -172191247 - AluY SINE Alu -12 299 1 239 0 0 31 chr5 27439551 27439583 -172190567 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 16706 103 42 75 chr5 27442536 27445841 -172184309 + L1PA8 LINE L1 2895 6170 -2 948 279 64 29 chr5 27445841 27446389 -172183761 + L1M4 LINE L1 3168 3734 -2412 395 309 86 0 chr5 27448059 27448198 -172181952 + MIR SINE MIR 18 168 -94 21 57 0 0 chr5 27450160 27450195 -172179955 + AT_rich Low_complexity Low_complexity 1 35 0 222 218 69 92 chr5 27450418 27450505 -172179645 - MIR SINE MIR -10 252 168 310 316 155 26 chr5 27450634 27450789 -172179361 + MIR SINE MIR 12 186 -76 183 333 0 25 chr5 27451491 27451572 -172178578 - MIR SINE MIR -169 93 15 21 57 0 0 chr5 27452593 27452628 -172177522 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr5 27453240 27453261 -172176889 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 27453522 27453560 -172176590 + AT_rich Low_complexity Low_complexity 1 38 0 2319 58 7 7 chr5 27454945 27455240 -172174910 - AluY SINE Alu -16 295 1 35 78 0 0 chr5 27455326 27455403 -172174747 + AT_rich Low_complexity Low_complexity 1 77 0 1038 8 0 0 chr5 27455494 27455613 -172174537 - L1PA2 LINE L1 -1 6154 6036 25 0 0 0 chr5 27455895 27455920 -172174230 + AT_rich Low_complexity Low_complexity 1 25 0 407 19 19 0 chr5 27456170 27456222 -172173928 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 267 393 0 0 chr5 27456991 27457075 -172173075 + L2 LINE L2 3151 3234 -38 230 345 11 0 chr5 27457081 27457168 -172172982 - MIR SINE MIR -2 260 173 195 170 0 0 chr5 27458454 27458501 -172171649 + (TA)n Simple_repeat Simple_repeat 2 48 0 1982 134 36 38 chr5 27458723 27459088 -172171062 + THE1B LTR MaLR 1 364 0 209 254 28 42 chr5 27459139 27459210 -172170940 + MIR3 SINE MIR 91 160 -48 21 36 0 0 chr5 27459236 27459264 -172170886 + AT_rich Low_complexity Low_complexity 1 28 0 324 0 0 0 chr5 27459714 27459750 -172170400 + (TG)n Simple_repeat Simple_repeat 1 36 0 233 356 45 60 chr5 27461000 27461182 -172168968 + MIR SINE MIR 2 191 -54 1319 153 142 24 chr5 27461363 27461617 -172168533 + THE1B LTR MaLR 81 364 0 354 167 15 0 chr5 27461767 27461833 -172168317 + MSTD LTR MaLR 2 68 -360 575 286 6 40 chr5 27461865 27462040 -172168110 + MSTD LTR MaLR 227 395 -1 27 73 0 0 chr5 27462259 27462314 -172167836 + AT_rich Low_complexity Low_complexity 1 55 0 2103 103 10 0 chr5 27462584 27462874 -172167276 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr5 27463804 27463828 -172166322 + AT_rich Low_complexity Low_complexity 1 24 0 3301 213 23 26 chr5 27464052 27465152 -172164998 + L1MB5 LINE L1 4979 6076 -98 1494 152 110 26 chr5 27466380 27466689 -172163461 - MER44D DNA MER2_type -4 605 1 606 129 34 48 chr5 27467106 27467253 -172162897 - L1MA7 LINE L1 -8 6283 6139 536 224 37 0 chr5 27467272 27467406 -172162744 + L1MA7 LINE L1 6005 6143 -148 208 385 73 6 chr5 27467634 27467813 -172162337 + L2 LINE L2 2522 2712 -602 24 77 0 0 chr5 27467959 27468011 -172162139 + AT_rich Low_complexity Low_complexity 1 52 0 193 333 231 6 chr5 27468270 27468426 -172161724 + L2 LINE L2 3031 3221 -92 1099 260 123 31 chr5 27468557 27468938 -172161212 + MLT2B1 LTR ERVL 103 518 -2 16938 156 47 56 chr5 27468983 27471072 -172159078 + L1M1 LINE L1 16 2202 -5363 2970 168 33 9 chr5 27471072 27471644 -172158506 + LTR60 LTR ERV1 1 586 0 16938 156 47 56 chr5 27471644 27473062 -172157088 + L1M1 LINE L1 2202 3632 -3933 3785 233 39 22 chr5 27473096 27474252 -172155898 + L1M1 LINE L1 3608 4782 -2783 295 121 38 17 chr5 27474354 27474431 -172155719 - L1PA8 LINE L1 -188 5966 5884 1919 146 0 0 chr5 27474819 27475130 -172155020 + AluSx SINE Alu 1 311 0 265 321 57 0 chr5 27475673 27475779 -172154371 + LTR16A1 LTR ERVL 174 285 -172 1516 198 29 0 chr5 27476472 27476627 -172153523 - AluJb SINE Alu -26 286 118 221 0 0 33 chr5 27476627 27476657 -172153493 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1516 198 29 0 chr5 27476657 27476779 -172153371 - AluJb SINE Alu -194 118 1 301 322 11 11 chr5 27477085 27477172 -172152978 - L2 LINE L2 -36 3277 3191 1562 183 0 41 chr5 27477234 27477529 -172152621 - AluJo SINE Alu -20 292 10 2036 118 0 0 chr5 27477809 27478088 -172152062 - AluSx SINE Alu -10 302 24 243 309 11 0 chr5 27478889 27478983 -172151167 - L1MC/D LINE L1 -2339 5469 5375 254 125 21 0 chr5 27479436 27479484 -172150666 + (TA)n Simple_repeat Simple_repeat 2 50 0 207 218 69 20 chr5 27479604 27479705 -172150445 + (TTAAA)n Simple_repeat Simple_repeat 5 110 0 851 216 54 62 chr5 27481935 27482176 -172147974 + MER8 DNA MER2_type 1 239 0 2319 89 0 0 chr5 27482392 27482683 -172147467 - AluSg SINE Alu -14 296 6 1930 151 10 10 chr5 27483489 27483800 -172146350 + AluSx SINE Alu 1 311 -1 1571 137 64 6 chr5 27484192 27484341 -172145809 - L1MA9 LINE L1 0 6312 6173 222 37 0 0 chr5 27484341 27484368 -172145782 + (TG)n Simple_repeat Simple_repeat 2 28 0 1571 137 64 6 chr5 27484368 27484531 -172145619 - L1MA9 LINE L1 -139 6173 5982 362 367 29 61 chr5 27485327 27485673 -172144477 + L1ME LINE L1 332 666 -5539 235 353 26 0 chr5 27485774 27485890 -172144260 + L1MC4 LINE L1 7907 8025 -17 1302 165 34 8 chr5 27485968 27486204 -172143946 - AluJb SINE Alu -8 304 63 299 186 43 0 chr5 27486276 27486346 -172143804 - L1MC/D LINE L1 -764 5400 5328 329 295 20 58 chr5 27486467 27486762 -172143388 - L1MC4 LINE L1 -169 7873 7590 293 309 66 7 chr5 27486764 27486916 -172143234 + L1M4 LINE L1 4622 4782 -1364 234 220 0 0 chr5 27486976 27487035 -172143115 + (TA)n Simple_repeat Simple_repeat 2 60 0 1838 295 73 40 chr5 27487459 27489627 -172140523 + L1ME LINE L1 591 2791 -3424 190 382 66 0 chr5 27490391 27490467 -172139683 + L2 LINE L2 3169 3249 -23 243 313 30 30 chr5 27490584 27490715 -172139435 + L1ME LINE L1 5602 5732 -458 1895 174 3 9 chr5 27490726 27491071 -172139079 + MER2 DNA MER2_type 2 344 0 24 32 0 0 chr5 27491175 27491206 -172138944 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr5 27491469 27491490 -172138660 + (CAT)n Simple_repeat Simple_repeat 1 21 0 201 121 0 0 chr5 27491638 27491671 -172138479 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 1938 118 20 13 chr5 27492203 27492509 -172137641 - AluSg SINE Alu 0 310 3 180 0 0 0 chr5 27492626 27492646 -172137504 + (CAA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr5 27494992 27495013 -172135137 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr5 27496615 27496647 -172133503 + (T)n Simple_repeat Simple_repeat 1 32 0 410 101 14 0 chr5 27499018 27499087 -172131063 + (TC)n Simple_repeat Simple_repeat 1 70 0 279 355 0 0 chr5 27499481 27499574 -172130576 - MIR SINE MIR -121 141 49 258 160 0 0 chr5 27499655 27499705 -172130445 + (CAT)n Simple_repeat Simple_repeat 1 50 0 411 294 123 42 chr5 27500446 27500755 -172129395 - L2 LINE L2 -439 2875 2542 381 325 58 31 chr5 27500984 27501175 -172128975 + LTR16A1 LTR ERVL 258 453 -4 310 276 11 0 chr5 27501496 27501583 -172128567 + (TA)n Simple_repeat Simple_repeat 2 89 0 1386 182 0 0 chr5 27501583 27501814 -172128336 - MER1B DNA MER1_type -66 231 1 1414 201 33 16 chr5 27501814 27502118 -172128032 + MLT1A1 LTR MaLR 55 363 -2 2816 230 25 32 chr5 27502118 27502341 -172127809 + MLT1A1-int LTR MaLR 5 228 -1143 2244 88 3 16 chr5 27502341 27502646 -172127504 + AluSp SINE Alu 1 301 -12 2816 230 25 32 chr5 27502646 27503161 -172126989 + MLT1A1-int LTR MaLR 228 752 -619 222 37 0 0 chr5 27503225 27503252 -172126898 + (A)n Simple_repeat Simple_repeat 1 27 0 2045 236 36 25 chr5 27503377 27503852 -172126298 + MLT1A1-int LTR MaLR 1255 1734 -1 1247 237 12 96 chr5 27503856 27504055 -172126095 + MLT1A2 LTR MaLR 4 153 -221 302 0 26 0 chr5 27504055 27504093 -172126057 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1247 237 12 96 chr5 27504093 27504298 -172125852 + MLT1A2 LTR MaLR 153 374 0 25 31 0 0 chr5 27505848 27505880 -172124270 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 27506142 27506171 -172123979 + AT_rich Low_complexity Low_complexity 1 29 0 205 226 19 0 chr5 27506176 27506229 -172123921 + (TA)n Simple_repeat Simple_repeat 1 54 0 246 156 0 0 chr5 27506252 27506316 -172123834 + (TA)n Simple_repeat Simple_repeat 2 65 0 195 235 0 0 chr5 27506776 27506827 -172123323 + (TG)n Simple_repeat Simple_repeat 2 52 0 2112 118 3 0 chr5 27507233 27507521 -172122629 - AluSc SINE Alu -17 292 4 404 102 17 0 chr5 27507751 27507810 -172122340 - L1P LINE L1 -900 5246 5187 3694 43 2 4 chr5 27507810 27508269 -172121881 + L1PA4 LINE L1 5695 6155 0 21 36 0 0 chr5 27508415 27508443 -172121707 + AT_rich Low_complexity Low_complexity 1 28 0 2154 113 20 0 chr5 27508490 27508791 -172121359 + AluSc SINE Alu 1 307 -2 184 270 226 0 chr5 27508874 27508989 -172121161 - L2 LINE L2 -62 3251 3111 8541 199 37 110 chr5 27508993 27511369 -172118781 + L1MC3 LINE L1 4728 7278 -507 297 0 0 0 chr5 27511369 27511402 -172118748 + (TC)n Simple_repeat Simple_repeat 1 33 0 8541 199 37 110 chr5 27511402 27511510 -172118640 + L1MC3 LINE L1 7278 7392 -393 7249 45 3 0 chr5 27511510 27512456 -172117694 + L1PA5 LINE L1 5206 6154 0 8541 199 37 110 chr5 27512456 27512532 -172117618 + L1MC3 LINE L1 7392 7472 -313 1137 217 4 0 chr5 27512532 27512767 -172117383 - MER46A DNA MER2_type 0 236 1 8541 199 37 110 chr5 27512767 27513120 -172117030 + L1MC3 LINE L1 7472 7353 -432 208 0 62 0 chr5 27513120 27513152 -172116998 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8541 199 37 110 chr5 27513152 27513537 -172116613 + L1MC3 LINE L1 7352 7764 -21 293 327 65 93 chr5 27513549 27514086 -172116064 - L2 LINE L2 -188 3125 2606 417 264 37 117 chr5 27514122 27514448 -172115702 - L2 LINE L2 -830 2484 2185 5472 128 5 3 chr5 27514800 27515703 -172114447 + L1PA14 LINE L1 5047 6152 -9 30 0 0 0 chr5 27515703 27515733 -172114417 + AT_rich Low_complexity Low_complexity 1 30 0 737 318 135 21 chr5 27515817 27516254 -172113896 + LTR33 LTR ERVL 31 517 -4 193 255 245 10 chr5 27516338 27516436 -172113714 - L2 LINE L2 -2 3311 3191 931 253 145 22 chr5 27517053 27517468 -172112682 - Charlie4a DNA MER1_type -7 501 36 1808 154 21 0 chr5 27517740 27518025 -172112125 + AluSx SINE Alu 3 293 -19 311 305 91 19 chr5 27518427 27518581 -172111569 - MLT1I LTR MaLR -236 173 9 1085 191 23 27 chr5 27519598 27519854 -172110296 - L1MB1 LINE L1 -18 6150 5896 587 312 67 40 chr5 27520336 27520708 -172109442 - MLT1I LTR MaLR -22 387 6 1303 219 113 24 chr5 27520733 27521158 -172108992 + MLT1C LTR MaLR 3 465 -2 328 206 15 145 chr5 27521332 27521463 -172108687 + MIR SINE MIR 64 177 -85 703 293 10 0 chr5 27521571 27521779 -172108371 + MER2 DNA MER2_type 1 210 -135 25 0 0 0 chr5 27521803 27521828 -172108322 + AT_rich Low_complexity Low_complexity 1 25 0 223 216 137 0 chr5 27522514 27522565 -172107585 - MIR SINE MIR -4 258 201 1283 208 67 31 chr5 27522585 27522945 -172107205 + MER93b LTR ERV1 1 373 0 425 305 123 48 chr5 27522949 27523283 -172106867 + MLT1I LTR MaLR 18 376 -33 692 283 178 28 chr5 27523495 27523962 -172106188 + MER90 LTR ERV1 78 614 0 257 221 0 35 chr5 27524124 27524210 -172105940 + (TA)n Simple_repeat Simple_repeat 1 83 0 21 0 0 0 chr5 27524404 27524425 -172105725 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 27525139 27525168 -172104982 + AT_rich Low_complexity Low_complexity 1 29 0 288 306 64 31 chr5 27526856 27527096 -172103054 + MER20B DNA MER1_type 2 270 -513 205 171 0 0 chr5 27527100 27527141 -172103009 + T-rich Low_complexity Low_complexity 4 44 0 273 299 78 59 chr5 27527196 27527400 -172102750 + MER20B DNA MER1_type 309 516 -267 203 254 0 0 chr5 27527834 27527889 -172102261 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 25 31 0 0 chr5 27529581 27529613 -172100537 + AT_rich Low_complexity Low_complexity 1 32 0 30 27 0 0 chr5 27529722 27529759 -172100391 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 27530114 27530142 -172100008 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr5 27530245 27530272 -172099878 + (CA)n Simple_repeat Simple_repeat 1 27 0 279 317 12 0 chr5 27532559 27532641 -172097509 - MIR3 SINE MIR -25 183 101 1987 130 0 0 chr5 27533294 27533614 -172096536 + AluSx SINE Alu 1 320 0 195 318 229 18 chr5 27534151 27534321 -172095829 - MIR SINE MIR -49 213 8 416 365 131 9 chr5 27535872 27536209 -172093941 + L2 LINE L2 2929 3306 -7 30 59 0 0 chr5 27536220 27536271 -172093879 + AT_rich Low_complexity Low_complexity 1 51 0 322 387 7 0 chr5 27537014 27537164 -172092986 - MIR SINE MIR -79 183 33 190 323 50 30 chr5 27537226 27537325 -172092825 - MIR SINE MIR -65 143 43 1861 155 7 3 chr5 27537621 27537917 -172092233 + AluSx SINE Alu 1 297 -15 205 296 87 56 chr5 27538849 27539045 -172091105 + L3 LINE CR1 1184 1385 -192 196 306 41 0 chr5 27539103 27539152 -172090998 + L2 LINE L2 3242 3292 -21 24 32 0 0 chr5 27541769 27541800 -172088350 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr5 27541902 27541934 -172088216 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 27542415 27542437 -172087713 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr5 27542794 27542822 -172087328 + AT_rich Low_complexity Low_complexity 1 28 0 324 70 0 0 chr5 27542990 27543033 -172087117 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr5 27543701 27543722 -172086428 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr5 27544068 27544092 -172086058 + AT_rich Low_complexity Low_complexity 1 24 0 186 43 0 0 chr5 27544104 27544127 -172086023 + (CA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr5 27544481 27544509 -172085641 + AT_rich Low_complexity Low_complexity 1 28 0 363 72 29 14 chr5 27544546 27544615 -172085535 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 213 39 0 0 chr5 27544690 27544716 -172085434 + (TA)n Simple_repeat Simple_repeat 2 27 0 489 47 0 0 chr5 27545198 27545262 -172084888 + (TG)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr5 27545572 27545593 -172084557 + AT_rich Low_complexity Low_complexity 1 21 0 575 317 65 93 chr5 27551058 27551641 -172078509 + L2 LINE L2 240 806 -2508 22 0 0 0 chr5 27552246 27552268 -172077882 + AT_rich Low_complexity Low_complexity 1 22 0 189 147 0 0 chr5 27552826 27552860 -172077290 + (TAA)n Simple_repeat Simple_repeat 1 34 0 342 356 113 9 chr5 27552867 27553089 -172077061 - MIR SINE MIR -13 249 5 26 30 0 0 chr5 27553644 27553677 -172076473 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr5 27554332 27554364 -172075786 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr5 27554502 27554524 -172075626 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 27555145 27555166 -172074984 + AT_rich Low_complexity Low_complexity 1 21 0 2281 39 0 1 chr5 27556337 27556644 -172073506 - L1M LINE L1 -758 5388 5101 5268 8 0 0 chr5 27556644 27557236 -172072914 + L1PA2 LINE L1 5561 6152 -3 303 99 28 14 chr5 27557871 27557942 -172072208 + (TA)n Simple_repeat Simple_repeat 2 73 0 263 316 76 80 chr5 27558649 27558899 -172071251 + L2 LINE L2 3004 3252 -20 300 260 58 31 chr5 27559318 27559473 -172070677 - MIR SINE MIR -57 151 37 298 290 61 30 chr5 27559676 27559807 -172070343 + MIR SINE MIR 68 202 -60 23 0 0 0 chr5 27560463 27560486 -172069664 + AT_rich Low_complexity Low_complexity 1 23 0 554 278 138 60 chr5 27560523 27561633 -172068517 - L1MEc LINE L1 -4098 2298 1102 222 224 15 60 chr5 27563248 27563315 -172066835 + MER5B DNA MER1_type 4 67 -111 2283 98 0 0 chr5 27563602 27563899 -172066251 - AluY SINE Alu -14 297 1 2231 95 0 3 chr5 27563905 27564199 -172065951 - AluSx SINE Alu -15 297 5 208 216 0 0 chr5 27564248 27564285 -172065865 + polypyrimidine Low_complexity Low_complexity 1 37 0 2498 133 38 12 chr5 27564673 27565094 -172065056 + MSTB1 LTR MaLR 1 432 0 211 200 22 0 chr5 27566773 27566818 -172063332 + CT-rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr5 27567016 27567044 -172063106 + AT_rich Low_complexity Low_complexity 1 28 0 767 338 63 43 chr5 27567396 27567793 -172062357 - LTR16C LTR ERVL 0 491 87 627 301 66 8 chr5 27567907 27568163 -172061987 + ERVL-E LTR ERVL 2876 3146 -2618 1422 285 96 91 chr5 27568163 27569698 -172060452 + ERVL-E LTR ERVL 4219 5761 -3 317 328 25 17 chr5 27569771 27569890 -172060260 + MLT2E LTR ERVL 34 153 -475 307 341 97 63 chr5 27571268 27571693 -172058457 + L2 LINE L2 2834 3272 0 707 347 51 13 chr5 27571855 27572230 -172057920 + LTR16B LTR ERVL 76 464 0 907 332 60 54 chr5 27572507 27572879 -172057271 + ERVL LTR ERVL 299 678 -4318 2557 40 0 10 chr5 27572879 27573183 -172056967 + AluY SINE Alu 1 301 -10 907 332 60 54 chr5 27573183 27573499 -172056651 + ERVL LTR ERVL 678 991 -4005 461 280 145 91 chr5 27573504 27573876 -172056274 + ERVL LTR ERVL 3986 4549 -619 431 222 0 0 chr5 27574089 27574179 -172055971 - Charlie5 DNA MER1_type -2522 90 1 24 32 0 0 chr5 27574356 27574387 -172055763 + AT_rich Low_complexity Low_complexity 1 31 0 218 390 0 0 chr5 27574593 27574675 -172055475 + MIR SINE MIR 73 154 -108 24 53 0 0 chr5 27576492 27576530 -172053620 + AT_rich Low_complexity Low_complexity 1 38 0 215 383 11 0 chr5 27576555 27576649 -172053501 - L2 LINE L2 0 3272 3178 2297 236 10 19 chr5 27576684 27577204 -172052946 + MLT2B2 LTR ERVL 1 515 0 638 238 17 65 chr5 27577254 27577451 -172052699 + MER58A DNA MER1_type 1 187 -2233 2171 117 0 3 chr5 27577451 27577758 -172052392 - AluSc SINE Alu -3 306 1 638 238 17 65 chr5 27577758 27577791 -172052359 + MER58A DNA MER1_type 187 220 -4 44 63 0 0 chr5 27577926 27578005 -172052145 + AT_rich Low_complexity Low_complexity 1 79 0 232 143 88 0 chr5 27578084 27578175 -172051975 + (TA)n Simple_repeat Simple_repeat 2 100 0 196 344 31 21 chr5 27578650 27578746 -172051404 - MIR SINE MIR -70 192 96 557 298 22 6 chr5 27580352 27580533 -172049617 - MIR SINE MIR -68 194 11 259 357 71 0 chr5 27580655 27580753 -172049397 - L2 LINE L2 -5 3308 3204 280 322 41 0 chr5 27581585 27581706 -172048444 + MLT1J2 LTR MaLR 59 184 -266 15674 194 57 7 chr5 27581858 27588084 -172042066 + L1PA14 LINE L1 61 6883 -716 2431 97 3 43 chr5 27588084 27588130 -172042020 - THE1A LTR MaLR 0 355 309 2388 82 0 3 chr5 27588130 27588434 -172041716 + AluY SINE Alu 1 303 -8 2431 97 3 43 chr5 27588434 27588757 -172041393 - THE1A LTR MaLR -46 309 1 3741 101 8 0 chr5 27588757 27589271 -172040879 - THE1A-int LTR MaLR 0 1580 1063 1124 175 13 0 chr5 27589261 27589490 -172040660 + L1P LINE L1 5058 5289 -857 * 7608 99 14 2 chr5 27589497 27590545 -172039605 - THE1A-int LTR MaLR -519 1061 1 2334 116 29 0 chr5 27590545 27590890 -172039260 - THE1A LTR MaLR 0 355 1 4948 106 4 0 chr5 27590891 27591599 -172038551 + L1PA14 LINE L1 6880 7590 -9 537 140 0 20 chr5 27594442 27594542 -172035608 + AluY SINE Alu 200 297 -14 190 273 66 58 chr5 27594753 27594874 -172035276 - MIR SINE MIR -81 181 60 2344 48 30 0 chr5 27595272 27595392 -172034758 + AluY SINE Alu 1 116 -195 369 0 0 0 chr5 27595392 27595433 -172034717 + (CA)n Simple_repeat Simple_repeat 2 42 0 2344 48 30 0 chr5 27595433 27595607 -172034543 + AluY SINE Alu 116 304 -7 319 318 27 0 chr5 27598272 27598382 -172031768 - L2 LINE L2 -8 3305 3193 296 295 0 0 chr5 27598442 27598520 -172031630 + (TG)n Simple_repeat Simple_repeat 1 78 0 387 0 0 0 chr5 27598556 27598599 -172031551 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1828 153 0 27 chr5 27598604 27598898 -172031252 - AluSx SINE Alu -26 286 1 29 70 0 0 chr5 27598995 27599052 -172031098 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr5 27599094 27599115 -172031035 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 27599291 27599328 -172030822 + AT_rich Low_complexity Low_complexity 1 37 0 195 343 102 9 chr5 27600204 27600312 -172029838 + MIR SINE MIR 66 183 -79 28 48 0 0 chr5 27600438 27600480 -172029670 + AT_rich Low_complexity Low_complexity 1 42 0 439 342 74 0 chr5 27600939 27601129 -172029021 + LTR16A LTR ERVL 146 349 -101 3130 189 42 31 chr5 27601152 27601871 -172028279 + LTR8A LTR ERV1 1 727 0 1278 94 0 21 chr5 27603399 27603412 -172026738 + AluY SINE Alu 121 133 -178 2402 63 0 19 chr5 27603412 27603729 -172026421 + AluY SINE Alu 1 311 0 1278 94 0 21 chr5 27603729 27603907 -172026243 + AluY SINE Alu 133 308 -3 727 352 150 37 chr5 27605149 27605204 -172024946 + L2 LINE L2 1882 1929 -1343 2225 104 0 0 chr5 27605204 27605511 -172024639 - AluSx SINE Alu -5 307 1 727 352 150 37 chr5 27605511 27605535 -172024615 + L2 LINE L2 1929 1949 -1323 2281 196 72 48 chr5 27605535 27606245 -172023905 - LTR8A LTR ERV1 0 727 1 727 352 150 37 chr5 27606245 27606315 -172023835 + L2 LINE L2 1949 2010 -1262 4776 113 7 7 chr5 27606315 27607006 -172023144 - LTR8 LTR ERV1 0 691 1 727 352 150 37 chr5 27607006 27607895 -172022255 + L2 LINE L2 2010 3040 -232 301 285 134 47 chr5 27608149 27608321 -172021829 + MIR3 SINE MIR 19 205 -3 29 28 0 0 chr5 27608344 27608380 -172021770 + AT_rich Low_complexity Low_complexity 1 36 0 307 274 151 28 chr5 27609676 27609928 -172020222 - L1ME4a LINE L1 -126 5995 5713 27 29 0 0 chr5 27610014 27610048 -172020102 + AT_rich Low_complexity Low_complexity 1 34 0 28 29 0 0 chr5 27610412 27610447 -172019703 + AT_rich Low_complexity Low_complexity 1 35 0 2009 165 12 0 chr5 27610830 27611163 -172018987 + MER1B DNA MER1_type 1 337 0 431 313 65 45 chr5 27611166 27611502 -172018648 - L1ME3A LINE L1 -264 5906 5564 29 28 0 0 chr5 27611553 27611589 -172018561 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr5 27611956 27611989 -172018161 + AT_rich Low_complexity Low_complexity 1 33 0 228 312 32 21 chr5 27612383 27612476 -172017674 + MIR SINE MIR 53 146 -116 202 200 0 29 chr5 27613131 27613201 -172016949 + (TA)n Simple_repeat Simple_repeat 1 68 0 234 0 0 0 chr5 27613223 27613249 -172016901 + (CA)n Simple_repeat Simple_repeat 1 26 0 594 0 0 0 chr5 27614575 27614641 -172015509 + (TA)n Simple_repeat Simple_repeat 1 66 0 1081 197 52 116 chr5 27614779 27615185 -172014965 + MLT1B LTR MaLR 11 390 0 237 65 0 0 chr5 27615322 27615353 -172014797 + (TG)n Simple_repeat Simple_repeat 2 32 0 2153 90 6 26 chr5 27615729 27616040 -172014110 + AluY SINE Alu 1 305 -6 1938 118 0 0 chr5 27616057 27616365 -172013785 + AluSq SINE Alu 21 328 0 26 50 0 0 chr5 27617083 27617123 -172013027 + AT_rich Low_complexity Low_complexity 1 40 0 1140 243 35 30 chr5 27617141 27617507 -172012643 - MER93b LTR ERV1 -1 372 5 838 149 8 0 chr5 27617660 27617794 -172012356 - MER50 LTR ERV1 -23 711 577 225 0 0 0 chr5 27668152 27668177 -171961973 + (A)n Simple_repeat Simple_repeat 1 25 0 1886 118 3 3 chr5 27668187 27668476 -171961674 + AluY SINE Alu 1 289 -22 1905 246 82 24 chr5 27668591 27669261 -171960889 + L1MCb LINE L1 435 1143 -4902 2667 245 145 26 chr5 27669263 27669389 -171960761 + L1MD3 LINE L1 5186 4419 -1727 2216 76 13 3 chr5 27669389 27669690 -171960460 + AluY SINE Alu 1 304 -7 2667 245 145 26 chr5 27669690 27670797 -171959353 + L1MD3 LINE L1 4418 5392 -754 2414 204 87 25 chr5 27670792 27671426 -171958724 + L1MC3 LINE L1 7094 7766 -19 * 239 340 102 30 chr5 27671535 27671732 -171958418 + MLT1J2 LTR MaLR 240 450 0 270 207 92 46 chr5 27671908 27671995 -171958155 - L2 LINE L2 -41 3231 3141 2285 98 3 0 chr5 27672265 27672572 -171957578 + AluSg1 SINE Alu 1 308 -1 21 0 0 0 chr5 27673393 27673414 -171956736 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 27674680 27674710 -171955440 + AT_rich Low_complexity Low_complexity 1 30 0 673 273 25 50 chr5 27675699 27675941 -171954209 - L1MD3 LINE L1 -1018 6977 6742 304 209 48 19 chr5 27675939 27676044 -171954106 + L1MD3 LINE L1 7880 7987 -8 * 2288 57 43 10 chr5 27676058 27676359 -171953791 + AluY SINE Alu 1 311 0 225 0 0 0 chr5 27676895 27676920 -171953230 + (A)n Simple_repeat Simple_repeat 1 25 0 2253 50 3 3 chr5 27676929 27677240 -171952910 + AluY SINE Alu 1 311 0 1494 180 64 15 chr5 27678030 27678358 -171951792 + MER2 DNA MER2_type 1 344 0 371 365 72 14 chr5 27680097 27680374 -171949776 + LTR16A LTR ERVL 78 370 -80 962 256 16 20 chr5 27680450 27680696 -171949454 + LTR53 LTR ERVL 189 433 -86 5734 40 0 1 chr5 27680721 27681424 -171948726 - L1PA4 LINE L1 -1073 5073 4372 7354 36 2 0 chr5 27681424 27682501 -171947649 + L1PA4 LINE L1 5070 6149 -6 186 143 0 0 chr5 27682576 27682611 -171947539 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 300 341 22 7 chr5 27682619 27682757 -171947393 - MIR SINE MIR -109 153 14 27 81 0 0 chr5 27682806 27682868 -171947282 + AT_rich Low_complexity Low_complexity 1 62 0 23 33 0 0 chr5 27683117 27683147 -171947003 + AT_rich Low_complexity Low_complexity 1 30 0 544 160 47 7 chr5 27683310 27683460 -171946690 + GA-rich Low_complexity Low_complexity 4 159 0 226 341 155 0 chr5 27684455 27684584 -171945566 - MIR3 SINE MIR -3 205 57 329 315 132 52 chr5 27685024 27685411 -171944739 + L2 LINE L2 2891 3308 -5 1799 215 47 92 chr5 27685782 27686383 -171943767 - MLT1E2 LTR MaLR 0 626 53 831 217 6 0 chr5 27688120 27688286 -171941864 + FAM SINE Alu 1 167 -8 942 187 115 19 chr5 27689658 27689867 -171940283 + MSTA LTR MaLR 197 425 -3 7983 202 18 13 chr5 27689867 27691508 -171938642 + MSTA-int LTR MaLR 2 1651 0 1885 173 96 10 chr5 27691508 27691902 -171938248 + MSTA LTR MaLR 1 428 0 2466 118 14 0 chr5 27692494 27692860 -171937290 + THE1C LTR MaLR 1 371 -4 27 0 0 0 chr5 27693039 27693066 -171937084 + AT_rich Low_complexity Low_complexity 1 27 0 1452 176 45 62 chr5 27694145 27694847 -171935303 - pTR5 LTR ERV1 -513 1480 119 2256 103 0 0 chr5 27697481 27697781 -171932369 - AluY SINE Alu -9 302 3 307 325 96 28 chr5 27698035 27698437 -171931713 + L1MC/D LINE L1 5482 5900 -347 706 69 6 114 chr5 27698767 27698942 -171931208 + AluSp/q SINE Alu 158 313 0 459 0 0 0 chr5 27698944 27698995 -171931155 + (TA)n Simple_repeat Simple_repeat 1 51 0 1179 280 117 42 chr5 27699096 27701108 -171929042 - L1MCc LINE L1 -3405 3536 1207 180 0 0 0 chr5 27701339 27701359 -171928791 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 270 380 9 0 chr5 27701379 27701492 -171928658 - ERVL LTR ERVL -2132 3632 3519 427 364 67 12 chr5 27701753 27702080 -171928070 - ERVL LTR ERVL -2536 3228 2884 744 59 20 0 chr5 27702081 27702240 -171927910 + AluYa5/8 SINE Alu 177 337 0 781 325 21 64 chr5 27702350 27702914 -171927236 - ERVL LTR ERVL -3046 2718 2179 21 0 0 0 chr5 27706197 27706218 -171923932 + AT_rich Low_complexity Low_complexity 1 21 0 2184 82 0 27 chr5 27707309 27707625 -171922525 - AluY SINE Alu 0 308 1 262 212 30 0 chr5 27707813 27707879 -171922271 + (CATA)n Simple_repeat Simple_repeat 1 68 0 1336 178 4 47 chr5 27707943 27708218 -171921932 - AluJo SINE Alu -13 299 37 207 246 0 66 chr5 27708571 27708632 -171921518 - L2 LINE L2 -8 3305 3249 2188 82 7 13 chr5 27709274 27709579 -171920571 - AluY SINE Alu -3 308 6 28 61 0 0 chr5 27711294 27711343 -171918807 + AT_rich Low_complexity Low_complexity 1 49 0 468 286 103 93 chr5 27711794 27712491 -171917659 + HAL1 LINE L1 963 1666 -841 191 149 0 21 chr5 27712846 27712893 -171917257 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 21 0 0 0 chr5 27712937 27712958 -171917192 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 27713460 27713490 -171916660 + AT_rich Low_complexity Low_complexity 1 30 0 271 289 52 21 chr5 27714299 27714396 -171915754 - MLT1H LTR MaLR -195 354 255 2456 114 28 14 chr5 27714397 27714756 -171915394 - THE1B LTR MaLR 0 364 1 269 337 125 19 chr5 27714842 27715106 -171915044 - L2 LINE L2 -759 2555 2264 1834 133 0 14 chr5 27715464 27715796 -171914354 - AluSx SINE Alu 0 338 11 183 308 0 87 chr5 27716060 27716164 -171913986 + MIR SINE MIR 80 174 -88 267 258 0 32 chr5 27717069 27717162 -171912988 + (TA)n Simple_repeat Simple_repeat 1 90 0 511 158 21 95 chr5 27717345 27717591 -171912559 + MER51A LTR ERV1 1 162 -215 * 1797 139 53 10 chr5 27717584 27717886 -171912264 + MER51B LTR ERV1 63 377 0 1678 170 22 19 chr5 27718338 27718655 -171911495 + MER1A DNA MER1_type 1 318 -211 673 118 0 20 chr5 27718655 27718757 -171911393 - MER4A LTR ERV1 0 664 565 * 805 212 110 57 chr5 27718754 27719018 -171911132 - LTR21A LTR ERV1 -16 489 212 578 190 0 0 chr5 27719186 27719286 -171910864 - MER4B LTR ERV1 -96 514 415 2322 61 0 3 chr5 27719289 27719583 -171910567 + AluY SINE Alu 4 296 -15 482 305 37 11 chr5 27719655 27719842 -171910308 + L1ME LINE L1 5515 5706 -458 334 118 0 0 chr5 27719852 27719929 -171910221 + AluJ/FRAM SINE Alu 232 308 0 248 175 0 0 chr5 27719929 27719969 -171910181 - MER4A LTR ERV1 -188 476 437 500 137 7 38 chr5 27719986 27720132 -171910018 - MER4A LTR ERV1 -203 461 262 531 144 21 10 chr5 27720133 27720230 -171909920 - MER4A LTR ERV1 -566 98 1 1323 138 24 0 chr5 27720230 27720440 -171909710 + MER1A DNA MER1_type 315 529 0 2201 81 0 7 chr5 27720569 27720866 -171909284 + AluY SINE Alu 16 310 -1 22 0 0 0 chr5 27721073 27721095 -171909055 + AT_rich Low_complexity Low_complexity 1 22 0 1009 172 37 5 chr5 27721205 27721420 -171908730 - L1MB3 LINE L1 -3 6180 5959 196 303 45 0 chr5 27721511 27721577 -171908573 + L2 LINE L2 2290 2358 -956 1557 212 5 61 chr5 27721687 27722097 -171908053 + MLT1B LTR MaLR 4 390 0 371 314 8 17 chr5 27722481 27722599 -171907551 - MER5A DNA MER1_type -30 159 43 773 257 87 30 chr5 27723722 27724057 -171906093 - MLT1A1 LTR MaLR -4 361 8 428 239 62 9 chr5 27724669 27724782 -171905368 + MER51D LTR ERV1 463 581 -76 21 36 0 0 chr5 27724922 27724950 -171905200 + AT_rich Low_complexity Low_complexity 1 28 0 30 59 0 0 chr5 27725154 27725205 -171904945 + AT_rich Low_complexity Low_complexity 1 51 0 373 329 55 20 chr5 27725815 27725961 -171904189 - MLT1K LTR MaLR -342 246 96 236 128 0 21 chr5 27726073 27726120 -171904030 + (TA)n Simple_repeat Simple_repeat 1 46 0 1693 219 3 16 chr5 27727128 27727498 -171902652 + MLT1A1 LTR MaLR 1 365 0 186 397 23 8 chr5 27727535 27727666 -171902484 + MIR SINE MIR 109 241 -21 263 232 0 29 chr5 27727772 27727841 -171902309 + MLT1H LTR MaLR 96 162 -387 303 177 0 0 chr5 27728158 27728220 -171901930 + CT-rich Low_complexity Low_complexity 1 62 0 345 24 0 0 chr5 27728654 27728696 -171901454 + (CA)n Simple_repeat Simple_repeat 1 42 0 3225 62 0 0 chr5 27728839 27729255 -171900895 - L1PA5 LINE L1 -8 6146 5731 1384 43 0 0 chr5 27729255 27729419 -171900731 + L1PA5 LINE L1 5574 5737 -417 26 30 0 0 chr5 27729967 27730000 -171900150 + AT_rich Low_complexity Low_complexity 1 33 0 203 301 14 0 chr5 27730979 27731052 -171899098 + (TATG)n Simple_repeat Simple_repeat 2 75 0 26 30 0 0 chr5 27731398 27731431 -171898719 + AT_rich Low_complexity Low_complexity 1 33 0 225 255 0 0 chr5 27733133 27733180 -171896970 + (CA)n Simple_repeat Simple_repeat 2 48 0 241 288 85 17 chr5 27733893 27734011 -171896139 + L3 LINE CR1 839 964 -613 199 374 12 0 chr5 27734278 27734361 -171895789 + L3 LINE CR1 1074 1157 -420 511 314 5 32 chr5 27734684 27734872 -171895278 + HERVL-F LTR ERVL 767 949 -4815 475 270 13 26 chr5 27735154 27735306 -171894844 + HERVL-F LTR ERVL 3100 3249 -2405 814 282 53 8 chr5 27735338 27735604 -171894546 + HERVL-F LTR ERVL 3364 3641 -2123 2574 274 63 20 chr5 27735610 27736857 -171893293 + L1ME1 LINE L1 4861 6160 -6 348 304 27 9 chr5 27736888 27737000 -171893150 + HERVL-F LTR ERVL 4442 4555 -1099 361 340 77 10 chr5 27737122 27737316 -171892834 + HERVL-F LTR ERVL 4745 4951 -813 653 288 49 57 chr5 27737367 27737993 -171892157 + HERVL-F LTR ERVL 4997 5752 -12 765 309 78 45 chr5 27737994 27738546 -171891604 + MLT2F LTR ERVL 46 655 -8 237 62 0 0 chr5 27738726 27738758 -171891392 - L1P LINE L1 -736 5420 5389 774 333 62 6 chr5 27738817 27739153 -171890997 + LTR16B LTR ERVL 110 464 0 319 286 27 81 chr5 27739466 27739493 -171890657 + MLT1G LTR MaLR 221 248 -342 3804 148 3 0 chr5 27739493 27740093 -171890057 + LTR43 LTR ERV1 1 602 0 319 286 27 81 chr5 27740093 27740250 -171889900 + MLT1G LTR MaLR 248 395 -195 467 310 94 19 chr5 27740280 27740493 -171889657 + MLT1G LTR MaLR 346 574 -16 2370 117 16 19 chr5 27740605 27740981 -171889169 - THE1C LTR MaLR 0 375 1 1895 141 3 14 chr5 27741518 27741808 -171888342 + AluSx SINE Alu 5 291 -21 321 159 65 9 chr5 27741880 27741987 -171888163 + (TA)n Simple_repeat Simple_repeat 1 113 0 203 331 124 0 chr5 27741987 27742108 -171888042 - MIR SINE MIR 0 262 127 488 95 27 0 chr5 27744249 27744323 -171885827 + MADE1 DNA Mariner 1 76 -4 1843 129 0 4 chr5 27744749 27745027 -171885123 + AluSq SINE Alu 35 311 -2 1258 295 28 36 chr5 27745236 27745707 -171884443 - MLT1C LTR MaLR 0 467 1 2157 185 18 8 chr5 27745917 27746312 -171883838 - MSTB LTR MaLR -27 399 1 185 347 20 0 chr5 27746455 27746504 -171883646 - MIR SINE MIR -160 102 53 22 0 0 0 chr5 27747411 27747433 -171882717 + AT_rich Low_complexity Low_complexity 1 22 0 414 400 91 9 chr5 27747442 27747672 -171882478 + MER115 DNA AcHobo 1 249 -444 * 749 384 12 21 chr5 27747667 27748203 -171881947 + MER115 DNA AcHobo 89 693 0 260 284 14 0 chr5 27749567 27749641 -171880509 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 184 375 0 0 chr5 27749682 27749746 -171880404 - L3 LINE CR1 -3 1574 1511 2705 13 0 0 chr5 27750357 27750660 -171879490 + AluYa5 SINE Alu 1 303 -8 29 0 0 0 chr5 27750759 27750788 -171879362 + AT_rich Low_complexity Low_complexity 1 29 0 180 224 0 86 chr5 27751329 27751387 -171878763 - MIR3 SINE MIR -44 164 112 325 317 107 4 chr5 27752222 27752503 -171877647 + L1M4 LINE L1 2662 2971 -3175 264 160 0 0 chr5 27752597 27752647 -171877503 + L1ME3A LINE L1 1339 1388 -4996 * 3307 215 34 37 chr5 27752642 27753536 -171876614 + L1MB5 LINE L1 5276 6166 -8 598 278 111 74 chr5 27753638 27753970 -171876180 + L1ME3A LINE L1 3830 4148 -2234 2060 91 14 0 chr5 27753970 27754266 -171875884 + L1PA13 LINE L1 5845 6144 -19 598 278 111 74 chr5 27754266 27754888 -171875262 + L1ME3A LINE L1 4148 4746 -1636 312 27 0 0 chr5 27754888 27754925 -171875225 + (TG)n Simple_repeat Simple_repeat 1 37 0 598 278 111 74 chr5 27754925 27755158 -171874992 + L1ME3A LINE L1 4746 4969 -1413 2261 83 0 13 chr5 27755158 27755458 -171874692 + AluY SINE Alu 1 296 -15 598 278 111 74 chr5 27755458 27755597 -171874553 + L1ME3A LINE L1 4969 5207 -1175 2413 218 31 12 chr5 27755597 27756110 -171874040 + Tigger7 DNA MER2_type 1 523 -1964 450 250 0 0 chr5 27756112 27756200 -171873950 + Tigger7 DNA MER2_type 2400 2487 0 2252 90 0 7 chr5 27756219 27756520 -171873630 + AluY SINE Alu 13 311 0 480 332 40 35 chr5 27756523 27756893 -171873257 + L1ME3A LINE L1 5216 5587 -795 1641 176 46 30 chr5 27756943 27757312 -171872838 + THE1C LTR MaLR 1 375 0 8855 151 30 36 chr5 27757314 27758901 -171871249 + THE1C-int LTR MaLR 3 1579 -1 1247 203 67 41 chr5 27758901 27759239 -171870911 + THE1C LTR MaLR 1 402 -24 263 264 50 8 chr5 27759307 27759428 -171870722 + L1ME3A LINE L1 5691 5816 -590 593 296 40 25 chr5 27759465 27759742 -171870408 + L1ME3A LINE L1 6121 6401 -5 24 53 0 0 chr5 27759872 27759910 -171870240 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr5 27762324 27762349 -171867801 + AT_rich Low_complexity Low_complexity 1 25 0 955 238 84 82 chr5 27763098 27763598 -171866552 - MLT1D LTR MaLR -2 503 3 4011 108 26 8 chr5 27763811 27764434 -171865716 + L1PA10 LINE L1 5523 6156 -12 288 346 23 30 chr5 27765116 27765249 -171864901 - MLT2E LTR ERVL -460 168 37 225 0 0 0 chr5 27765415 27765440 -171864710 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 324 0 0 0 chr5 27765439 27765475 -171864675 + (CA)n Simple_repeat Simple_repeat 1 36 0 8185 229 25 59 chr5 27766011 27769044 -171861106 + L1P5 LINE L1 2567 5491 -660 34 24 0 0 chr5 27769140 27769181 -171860969 + AT_rich Low_complexity Low_complexity 1 41 0 584 341 48 8 chr5 27770506 27770758 -171859392 - MIR SINE MIR 0 262 1 23 54 0 0 chr5 27771109 27771146 -171859004 + AT_rich Low_complexity Low_complexity 1 37 0 305 174 116 0 chr5 27771338 27771424 -171858726 + L1MB3 LINE L1 6081 6176 -7 260 213 25 12 chr5 27771595 27771675 -171858475 + HAL1b LINE L1 1266 1346 -2 22 70 0 0 chr5 27771750 27771793 -171858357 + AT_rich Low_complexity Low_complexity 1 43 0 311 149 0 0 chr5 27772670 27772717 -171857433 + L1MA6 LINE L1 6062 6108 -192 1426 218 0 10 chr5 27772962 27773255 -171856895 + AluJo SINE Alu 2 291 -21 278 344 16 49 chr5 27773308 27773430 -171856720 - L2 LINE L2 -11 3261 3144 252 0 0 0 chr5 27773788 27773816 -171856334 + (TA)n Simple_repeat Simple_repeat 2 29 0 183 24 49 49 chr5 27773975 27774016 -171856134 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 472 134 0 0 chr5 27774020 27774087 -171856063 - AluS SINE Alu -26 286 220 337 276 0 35 chr5 27774248 27774335 -171855815 + L2 LINE L2 3227 3310 -3 1967 120 97 32 chr5 27774415 27774757 -171855393 + THE1B LTR MaLR 1 364 0 208 360 131 48 chr5 27775084 27775750 -171854400 - L2 LINE L2 -978 2336 1616 192 396 19 0 chr5 27775834 27775940 -171854210 - L2 LINE L2 -1840 1474 1367 1533 132 0 0 chr5 27777881 27778121 -171852029 + AluSq SINE Alu 68 307 0 210 143 0 0 chr5 27778220 27778255 -171851895 + (TA)n Simple_repeat Simple_repeat 2 36 0 1144 221 54 27 chr5 27778687 27779022 -171851128 + MER2 DNA MER2_type 1 344 0 1464 187 13 97 chr5 27780523 27780942 -171849208 - MER67C LTR ERV1 -243 271 1 326 275 0 0 chr5 27782395 27782475 -171847675 - MER96 DNA MER1_type? -78 97 18 963 325 32 3 chr5 27782481 27782795 -171847355 - MLT2F LTR ERVL -180 483 161 333 203 0 0 chr5 27782825 27782889 -171847261 - MLT2F LTR ERVL -596 67 4 561 319 86 32 chr5 27784565 27784973 -171845177 - MLT1J1 LTR MaLR -14 432 3 28 61 0 0 chr5 27785065 27785114 -171845036 + AT_rich Low_complexity Low_complexity 1 49 0 597 261 96 43 chr5 27786337 27786572 -171843578 - MER110 LTR ERV1 -7 484 228 2310 92 3 0 chr5 27786572 27786866 -171843284 + AluSc SINE Alu 1 295 -14 597 261 96 43 chr5 27786866 27786933 -171843217 - MER110 LTR ERV1 -263 228 166 894 202 30 20 chr5 27787391 27787589 -171842561 - MER3 DNA MER1_type -5 204 5 23 33 0 0 chr5 27787993 27788023 -171842127 + AT_rich Low_complexity Low_complexity 1 30 0 432 118 0 0 chr5 27788441 27788509 -171841641 + (TG)n Simple_repeat Simple_repeat 2 69 0 245 227 0 45 chr5 27788920 27788986 -171841164 - MIR SINE MIR -5 257 195 792 251 31 1 chr5 27789376 27789613 -171840537 - L1ME2 LINE L1 -259 5905 5712 1854 141 7 7 chr5 27789874 27790165 -171839985 + AluSp SINE Alu 1 291 -22 25 0 0 0 chr5 27790165 27790190 -171839960 + AT_rich Low_complexity Low_complexity 1 25 0 315 0 0 0 chr5 27790414 27790449 -171839701 + (CA)n Simple_repeat Simple_repeat 1 35 0 198 277 50 50 chr5 27790591 27790692 -171839458 + MIR SINE MIR 52 152 -110 376 203 0 0 chr5 27790898 27790977 -171839173 - L1 LINE L1 -1729 4417 4339 4790 171 5 42 chr5 27791002 27792810 -171837340 + L1PA6 LINE L1 4409 6154 0 2532 188 32 9 chr5 27792812 27793366 -171836784 + L1MA4 LINE L1 5724 6290 -10 1456 200 6 16 chr5 27793062 27793377 -171836773 + L1MA3 LINE L1 5994 6305 0 23 0 0 0 chr5 27793423 27793446 -171836704 + AT_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr5 27794077 27794113 -171836037 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr5 27794146 27794174 -171835976 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr5 27794350 27794383 -171835767 + AT_rich Low_complexity Low_complexity 1 33 0 291 302 147 16 chr5 27794620 27794749 -171835401 + MIR SINE MIR 109 254 -8 29 70 0 0 chr5 27795141 27795198 -171834952 + AT_rich Low_complexity Low_complexity 1 57 0 214 261 0 0 chr5 27795267 27795313 -171834837 + (CATA)n Simple_repeat Simple_repeat 3 48 0 262 385 7 14 chr5 27795737 27795885 -171834265 + MLT2E LTR ERVL 32 178 -450 21 0 0 0 chr5 27796877 27796898 -171833252 + AT_rich Low_complexity Low_complexity 1 21 0 416 172 0 43 chr5 27796947 27797040 -171833110 + MER57-int LTR ERV1 5257 5345 -2192 24 53 0 0 chr5 27797058 27797096 -171833054 + AT_rich Low_complexity Low_complexity 1 38 0 34 55 0 0 chr5 27797142 27797197 -171832953 + AT_rich Low_complexity Low_complexity 1 55 0 24 0 0 0 chr5 27797420 27797444 -171832706 + AT_rich Low_complexity Low_complexity 1 24 0 5272 48 0 0 chr5 27798101 27798745 -171831405 + L1PA5 LINE L1 5503 6146 -8 21 36 0 0 chr5 27798745 27798773 -171831377 + AT_rich Low_complexity Low_complexity 1 28 0 360 64 0 0 chr5 27799038 27799085 -171831065 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 459 293 7 0 chr5 27799618 27799765 -171830385 - MER110 LTR ERV1 -12 479 332 24 0 0 0 chr5 27799765 27799789 -171830361 + AT_rich Low_complexity Low_complexity 1 24 0 692 308 40 7 chr5 27799875 27800151 -171829999 - Charlie2 DNA MER1_type -2155 627 343 431 237 58 53 chr5 27800175 27800382 -171829768 - LTR37B LTR ERV1 -11 457 250 209 133 0 67 chr5 27800433 27800478 -171829672 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 857 239 44 17 chr5 27800661 27800975 -171829175 - AluY SINE Alu 0 322 1 375 226 24 0 chr5 27801092 27801176 -171828974 + L1MD3 LINE L1 6742 6827 -1168 401 286 71 24 chr5 27801297 27801465 -171828685 + Charlie8 DNA MER1_type 73 248 -2169 383 98 16 0 chr5 27801563 27801624 -171828526 + (TA)n Simple_repeat Simple_repeat 2 63 0 207 370 143 25 chr5 27801822 27801941 -171828209 - L2 LINE L2 -11 3261 3129 330 304 87 72 chr5 27802053 27802162 -171827988 - L2 LINE L2 -497 2817 2711 180 0 0 0 chr5 27802162 27802182 -171827968 + (TG)n Simple_repeat Simple_repeat 1 20 0 330 304 87 72 chr5 27802182 27802348 -171827802 - L2 LINE L2 -603 2711 2538 1649 225 11 3 chr5 27803560 27803920 -171826230 + MLT1A1 LTR MaLR 1 363 -2 22 35 0 0 chr5 27804864 27804893 -171825257 + AT_rich Low_complexity Low_complexity 1 29 0 181 386 50 10 chr5 27804918 27805019 -171825131 + L2 LINE L2 3164 3268 -4 615 187 8 8 chr5 27805767 27805890 -171824260 + FLAM_A SINE Alu 1 123 -10 229 313 40 40 chr5 27807249 27807348 -171822802 - MIR SINE MIR -87 121 23 23 0 0 0 chr5 27808433 27808456 -171821694 + AT_rich Low_complexity Low_complexity 1 23 0 243 260 20 0 chr5 27808667 27808767 -171821383 + (TATAA)n Simple_repeat Simple_repeat 2 103 0 308 329 106 59 chr5 27809463 27809867 -171820283 + L1M4 LINE L1 3540 3962 -2184 233 307 85 20 chr5 27809910 27810063 -171820087 + L1M4 LINE L1 4030 4192 -1954 466 338 52 54 chr5 27810183 27810686 -171819464 + L1M4 LINE L1 4332 4833 -1313 584 271 109 57 chr5 27810752 27811136 -171819014 + L1MC2 LINE L1 28 431 -5995 578 239 24 6 chr5 27811242 27811409 -171818741 + L1MC2 LINE L1 5538 5707 -2358 3804 187 54 67 chr5 27811430 27812394 -171817756 + L1MCa LINE L1 47 997 -5429 1107 220 68 114 chr5 27812394 27812789 -171817361 - MSTD LTR MaLR 0 396 20 1478 157 111 98 chr5 27812797 27813276 -171816874 + L1MCa LINE L1 998 1482 -4944 * 2219 223 74 39 chr5 27813273 27813424 -171816726 + L1MC2 LINE L1 5693 5837 -787 1815 167 39 25 chr5 27813424 27813783 -171816367 + THE1B LTR MaLR 1 364 0 11339 95 9 2 chr5 27813783 27815352 -171814798 + THE1B-int LTR MaLR 1 1580 0 2069 148 39 20 chr5 27815352 27815709 -171814441 + THE1B LTR MaLR 1 364 0 2219 223 74 39 chr5 27815709 27816267 -171813883 + L1MC2 LINE L1 5836 6429 -195 209 238 63 0 chr5 27816524 27816587 -171813563 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 1006 297 95 48 chr5 27816660 27817795 -171812355 + L1ME2 LINE L1 1171 2252 -4174 2792 173 23 17 chr5 27817795 27818316 -171811834 - MER1A DNA MER1_type -3 524 1 1006 297 95 48 chr5 27818316 27819174 -171810976 + L1ME2 LINE L1 2252 3420 -3006 423 231 103 0 chr5 27819178 27819295 -171810855 - MLT1H1 LTR MaLR 0 555 427 509 383 17 14 chr5 27819498 27819843 -171810307 - LTR16A LTR ERVL 0 450 105 1690 258 99 21 chr5 27819941 27820668 -171809482 + L1ME2 LINE L1 5542 6324 -120 266 194 14 0 chr5 27820688 27820760 -171809390 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 398 244 119 42 chr5 27820993 27821033 -171809117 + L1MC5 LINE L1 7709 7744 -217 1487 201 3 33 chr5 27821033 27821337 -171808813 - AluJb SINE Alu -17 295 1 398 244 119 42 chr5 27821337 27821489 -171808661 + L1MC5 LINE L1 7744 7916 -45 670 243 58 40 chr5 27822944 27823165 -171806985 + MER20 DNA MER1_type 1 219 0 372 298 32 25 chr5 27823206 27823364 -171806786 + MIR SINE MIR 101 259 -3 324 48 0 0 chr5 27823443 27823485 -171806665 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 294 302 9 9 chr5 27824025 27824141 -171806009 + L1MCc LINE L1 82 197 -6226 1096 274 80 34 chr5 27824467 27825094 -171805056 + L1M4 LINE L1 4654 5309 -837 226 267 78 33 chr5 27825681 27825771 -171804379 + MLT1I LTR MaLR 73 166 -243 1028 236 65 96 chr5 27827513 27827564 -171802586 - MLT2B1 LTR ERVL 0 520 469 482 0 17 0 chr5 27827564 27827622 -171802528 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1028 236 65 96 chr5 27827622 27827847 -171802303 - MLT2B1 LTR ERVL -51 469 239 195 42 0 0 chr5 27827847 27827871 -171802279 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1028 236 65 96 chr5 27827871 27828127 -171802023 - MLT2B1 LTR ERVL -281 239 3 310 295 27 9 chr5 27829074 27829186 -171800964 - MLT1J1 LTR MaLR -278 168 55 200 286 20 20 chr5 27829752 27829850 -171800300 + (TATATG)n Simple_repeat Simple_repeat 3 100 0 39 0 0 0 chr5 27829987 27830026 -171800124 + AT_rich Low_complexity Low_complexity 1 39 0 27 49 0 0 chr5 27830168 27830209 -171799941 + AT_rich Low_complexity Low_complexity 1 41 0 2713 179 45 70 chr5 27830372 27831059 -171799091 - L1MA10 LINE L1 -14 6320 5651 1488 227 28 6 chr5 27831059 27831416 -171798734 + MLT1A1 LTR MaLR 1 365 0 357 260 68 20 chr5 27831428 27831574 -171798576 + L1 LINE L1 4950 5102 -1044 243 300 106 76 chr5 27831577 27832000 -171798150 - HsTC2a DNA Tc2 -279 465 30 22 0 0 0 chr5 27832171 27832193 -171797957 + AT_rich Low_complexity Low_complexity 1 22 0 1989 131 3 13 chr5 27832456 27832768 -171797382 + AluSx SINE Alu 4 312 0 354 23 0 0 chr5 27833533 27833576 -171796574 + (TG)n Simple_repeat Simple_repeat 2 44 0 26 93 0 0 chr5 27834284 27834359 -171795791 + AT_rich Low_complexity Low_complexity 1 75 0 1295 199 6 67 chr5 27886007 27886323 -171743827 + AluJo SINE Alu 1 297 -15 214 254 7 148 chr5 27886515 27886657 -171743493 - L2 LINE L2 -32 3281 3160 21 0 0 0 chr5 27886795 27886816 -171743334 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr5 27887789 27887825 -171742325 + AT_rich Low_complexity Low_complexity 1 36 0 189 74 0 0 chr5 27890321 27890348 -171739802 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 312 231 109 0 chr5 27891480 27891576 -171738574 - MLT1I LTR MaLR -5 434 310 400 311 47 31 chr5 27891679 27891872 -171738278 - MLT1J2 LTR MaLR -254 196 1 341 197 13 26 chr5 27892135 27892211 -171737939 + L1ME2 LINE L1 5972 6046 -118 24 32 0 0 chr5 27892379 27892410 -171737740 + AT_rich Low_complexity Low_complexity 1 31 0 1809 171 59 35 chr5 27892791 27893213 -171736937 - MSTB1 LTR MaLR 0 432 1 411 73 0 0 chr5 27894149 27894204 -171735946 + (TG)n Simple_repeat Simple_repeat 2 56 0 315 0 0 0 chr5 27895234 27895269 -171734881 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 273 73 53 chr5 27895419 27895879 -171734271 + L1M4 LINE L1 4310 4792 -1354 29 0 0 0 chr5 27896476 27896505 -171733645 + AT_rich Low_complexity Low_complexity 1 29 0 221 333 117 0 chr5 27896520 27896631 -171733519 + MIR SINE MIR 48 171 -91 2104 131 230 2 chr5 27896965 27897361 -171732789 + LTR12 LTR ERV1 2 487 -227 2181 199 75 140 chr5 27897505 27898416 -171731734 - MER21B LTR ERV1 0 902 71 359 138 0 0 chr5 27898514 27898572 -171731578 - MER21A LTR ERV1 -861 70 13 22 0 0 0 chr5 27898999 27899021 -171731129 + AT_rich Low_complexity Low_complexity 1 22 0 8427 120 17 8 chr5 27899051 27900321 -171729829 - HSMAR1 DNA Mariner -5 1282 1 21 0 0 0 chr5 27900351 27900372 -171729778 + AT_rich Low_complexity Low_complexity 1 21 0 21 95 0 0 chr5 27902670 27902733 -171727417 + AT_rich Low_complexity Low_complexity 1 63 0 42 65 0 0 chr5 27902962 27903039 -171727111 + AT_rich Low_complexity Low_complexity 1 77 0 24 32 0 0 chr5 27903573 27903604 -171726546 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr5 27903836 27903871 -171726279 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 27904874 27904898 -171725252 + AT_rich Low_complexity Low_complexity 1 24 0 1372 88 0 21 chr5 27905191 27905383 -171724767 - AluSg/x SINE Alu -17 295 108 317 230 47 20 chr5 27905653 27905801 -171724349 + L1ME LINE L1 945 1096 -5109 233 250 0 0 chr5 27905808 27905864 -171724286 + L1ME LINE L1 2312 2367 -4029 230 191 21 0 chr5 27905966 27906013 -171724137 + L1ME LINE L1 1161 1208 -4997 2152 184 22 5 chr5 27906152 27906566 -171723584 + MER61C LTR ERV1 14 434 0 763 196 24 100 chr5 27906566 27906816 -171723334 + MER61C-int LTR ERV1 2 232 -4985 * 26891 137 37 28 chr5 27906793 27911620 -171718530 + MER61C-int LTR ERV1 343 5213 -4 2223 181 35 6 chr5 27911620 27912051 -171718099 + MER61C LTR ERV1 6 434 0 393 291 108 21 chr5 27912051 27912485 -171717665 + L1ME LINE L1 1096 1569 -4511 333 323 51 15 chr5 27912459 27912654 -171717496 + L1ME LINE L1 2110 2311 -3769 * 6679 28 0 0 chr5 27912656 27913469 -171716681 + L1PA3 LINE L1 5355 6167 0 780 255 144 23 chr5 27913469 27913905 -171716245 + L1ME LINE L1 2353 2841 -3239 365 304 49 0 chr5 27913906 27914008 -171716142 + L2 LINE L2 3191 3297 -16 2147 113 7 7 chr5 27914998 27915308 -171714842 - AluSg SINE Alu 0 310 1 181 250 0 0 chr5 27915380 27915420 -171714730 - L2 LINE L2 -1 3312 3273 203 176 0 0 chr5 27915841 27915875 -171714275 + (TG)n Simple_repeat Simple_repeat 1 34 0 384 240 118 36 chr5 27915875 27916096 -171714054 - Charlie4 DNA MER1_type -20 1941 1703 439 330 54 10 chr5 27916588 27916791 -171713359 - MIR SINE MIR -26 236 25 216 97 0 0 chr5 27917284 27917315 -171712835 + (TA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr5 27917483 27917519 -171712631 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 27918514 27918536 -171711614 + AT_rich Low_complexity Low_complexity 1 22 0 1084 110 0 0 chr5 27918660 27918815 -171711335 - AluSp/q SINE Alu 0 313 159 198 349 105 0 chr5 27920063 27920215 -171709935 - L2 LINE L2 -961 2353 2186 1526 158 26 8 chr5 27920454 27920719 -171709431 - AluSx SINE Alu -4 308 39 186 355 53 26 chr5 27920777 27920966 -171709184 + L2 LINE L2 2660 2853 -461 299 287 23 0 chr5 27921223 27921310 -171708840 + GA-rich Low_complexity Low_complexity 3 91 0 21 0 0 0 chr5 27921750 27921771 -171708379 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 27922490 27922511 -171707639 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 27922964 27923002 -171707148 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 27923019 27923047 -171707103 + AT_rich Low_complexity Low_complexity 1 28 0 31 44 0 0 chr5 27923094 27923139 -171707011 + AT_rich Low_complexity Low_complexity 1 45 0 221 263 0 154 chr5 27924020 27924279 -171705871 + L2 LINE L2 1570 1788 -1526 238 175 0 0 chr5 27924288 27924328 -171705822 + Alu SINE Alu 3 42 -266 466 99 0 0 chr5 27924328 27924399 -171705751 + Alu SINE Alu 232 302 -10 284 329 183 30 chr5 27924505 27924937 -171705213 + L2 LINE L2 1854 2351 -963 1083 358 64 17 chr5 27925382 27926137 -171704013 - HERV16 LTR ERVL -2213 2783 1994 262 242 30 40 chr5 27926146 27926245 -171703905 - MLT1I LTR MaLR -41 368 271 454 317 77 59 chr5 27927124 27927462 -171702688 + LTR33 LTR ERVL 3 346 -175 2561 53 0 0 chr5 27927475 27927779 -171702371 - AluY SINE Alu -7 304 1 22 70 0 0 chr5 27928048 27928091 -171702059 + AT_rich Low_complexity Low_complexity 1 43 0 2147 97 23 3 chr5 27930014 27930314 -171699836 - AluY SINE Alu -5 306 1 206 373 51 0 chr5 27930402 27930520 -171699630 + MIR SINE MIR 118 241 -21 370 230 7 12 chr5 27930664 27930809 -171699341 + MER20 DNA MER1_type 1 219 0 335 310 17 9 chr5 27932644 27932760 -171697390 - L2 LINE L2 -5 3308 3192 26 0 0 0 chr5 27933057 27933083 -171697067 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr5 27934217 27934256 -171695894 + AT_rich Low_complexity Low_complexity 1 39 0 242 236 0 0 chr5 27934346 27934401 -171695749 + L1MC4 LINE L1 6649 6703 -1339 * 256 250 21 73 chr5 27934399 27934495 -171695655 - L1MC4 LINE L1 -1339 6703 6613 195 42 0 0 chr5 27934589 27934613 -171695537 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2418 52 0 13 chr5 27934615 27934920 -171695230 - AluY SINE Alu -10 301 1 231 211 0 0 chr5 27935513 27935565 -171694585 - L1MA9 LINE L1 -13 6299 6248 1694 157 60 43 chr5 27936045 27936414 -171693736 - THE1C LTR MaLR 0 375 1 8955 138 17 38 chr5 27936414 27938024 -171692126 - THE1C-int LTR MaLR 0 1580 4 1195 181 102 42 chr5 27938027 27938381 -171691769 - THE1C LTR MaLR 0 375 1 1648 181 20 16 chr5 27939223 27939526 -171690624 + AluJb SINE Alu 3 306 -6 328 291 9 27 chr5 27940162 27940272 -171689878 + MIR SINE MIR 64 171 -91 1769 117 0 0 chr5 27940456 27940712 -171689438 + AluSx SINE Alu 38 293 -19 32 67 0 0 chr5 27941023 27941083 -171689067 + AT_rich Low_complexity Low_complexity 1 60 0 2307 91 0 0 chr5 27942067 27942364 -171687786 - AluSc SINE Alu -6 303 7 27 87 0 0 chr5 27942657 27942726 -171687424 + AT_rich Low_complexity Low_complexity 1 69 0 1886 122 21 10 chr5 27942794 27943082 -171687068 - AluSx SINE Alu -13 299 9 214 354 51 36 chr5 27943881 27944076 -171686074 + MIR SINE MIR 57 254 -8 2235 164 16 47 chr5 27944157 27944417 -171685733 + L1MA9 LINE L1 5837 6077 -235 715 161 39 15 chr5 27944417 27944547 -171685603 - FLAM_C SINE Alu 0 133 1 2235 164 16 47 chr5 27944547 27944773 -171685377 + L1MA9 LINE L1 6077 6308 -4 524 233 69 31 chr5 27945784 27945943 -171684207 - L1MB7 LINE L1 -7 6177 6013 2590 235 52 25 chr5 27945953 27945992 -171684158 + L1M4 LINE L1 3415 3451 -2695 2389 94 0 0 chr5 27945992 27946301 -171683849 + AluSc SINE Alu 1 309 0 2590 235 52 25 chr5 27946301 27947048 -171683102 + L1M4 LINE L1 3451 4222 -1924 2471 201 23 23 chr5 27947063 27947595 -171682555 + Tigger1 DNA MER2_type 24 555 -1863 1217 277 16 8 chr5 27947595 27947981 -171682169 + L1M4 LINE L1 4696 5084 -1062 2821 85 20 15 chr5 27948234 27948636 -171681514 - MLT2A1 LTR ERVL -40 404 1 41896 93 6 2 chr5 27948636 27954264 -171675886 - HERVL-A1 LTR ERVL 0 5654 4 2802 100 20 35 chr5 27954267 27954307 -171675843 - MLT2A1 LTR ERVL 0 444 405 486 0 0 0 chr5 27954307 27954361 -171675789 + (TA)n Simple_repeat Simple_repeat 2 55 0 2802 100 20 35 chr5 27954361 27954771 -171675379 - MLT2A1 LTR ERVL -39 405 1 680 221 97 66 chr5 27954771 27955060 -171675090 + MLT1D LTR MaLR 152 449 -56 313 276 73 104 chr5 27955659 27955851 -171674299 + L1MC5 LINE L1 7746 7931 -30 2740 7 0 10 chr5 27956279 27956587 -171673563 + AluYa5 SINE Alu 1 305 -6 1121 234 0 58 chr5 27957703 27958062 -171672088 - MER52A LTR ERV1 -34 1721 1384 1584 71 0 0 chr5 27958084 27958280 -171671870 + AluSg/x SINE Alu 113 308 -2 314 287 49 15 chr5 27958469 27958619 -171671531 + MLT1F1 LTR MaLR 417 559 -8 308 224 15 22 chr5 27958706 27958840 -171671310 + (TTA)n Simple_repeat Simple_repeat 2 134 0 264 229 0 0 chr5 27958840 27958888 -171671262 - MLT1B LTR MaLR -336 54 7 * 568 246 0 0 chr5 27958885 27959007 -171671143 + MLT1B LTR MaLR 21 142 -248 886 213 91 15 chr5 27959008 27959271 -171670879 + MLT1B LTR MaLR 67 349 -41 477 0 0 0 chr5 27959810 27959863 -171670287 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 222 37 0 0 chr5 27959863 27959890 -171670260 + (GA)n Simple_repeat Simple_repeat 2 28 0 290 286 97 62 chr5 27960810 27961069 -171669081 + L2 LINE L2 1806 2073 -1241 329 300 30 0 chr5 27961093 27961193 -171668957 - LTR40a LTR ERVL -413 106 4 596 220 135 10 chr5 27961878 27962078 -171668072 - L1MC2 LINE L1 -98 6246 6022 * 6938 252 27 63 chr5 27962069 27963428 -171666722 - L1PA12 LINE L1 -2001 5583 4176 225 0 0 0 chr5 27963428 27963453 -171666697 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 6938 252 27 63 chr5 27963453 27965653 -171664497 - L1PA12 LINE L1 -3408 4176 2176 588 382 0 13 chr5 27965645 27965870 -171664280 - L1PA12 LINE L1 -6564 1010 789 * 375 194 101 23 chr5 27966074 27966203 -171663947 - L1MCb LINE L1 -3214 3350 3212 2080 248 42 15 chr5 27966239 27966695 -171663455 - MER70B LTR ERVL -108 470 3 1512 266 28 10 chr5 27966699 27967200 -171662950 - L1MCb LINE L1 -3350 3214 2705 832 284 30 85 chr5 27967248 27967780 -171662370 - L1MCb LINE L1 -5540 505 3 223 338 92 44 chr5 27968021 27968249 -171661901 - MIR SINE MIR -6 256 18 182 116 23 0 chr5 27969221 27969264 -171660886 + (TG)n Simple_repeat Simple_repeat 1 44 0 21 36 0 0 chr5 27970436 27970464 -171659686 + AT_rich Low_complexity Low_complexity 1 28 0 32 43 0 0 chr5 27970534 27970580 -171659570 + AT_rich Low_complexity Low_complexity 1 46 0 527 219 22 44 chr5 27971048 27971185 -171658965 - LTR5 LTR ERVK -835 134 1 1363 240 116 24 chr5 27971185 27972217 -171657933 + L1MC3 LINE L1 1871 3001 -3425 1598 181 5 32 chr5 27972319 27972700 -171657450 - L1PA16 LINE L1 -592 5574 5204 2913 152 44 67 chr5 27972703 27973297 -171656853 + L1PA16 LINE L1 5581 6160 -6 1224 266 49 18 chr5 27973303 27973750 -171656400 + L1MC3 LINE L1 4670 5130 -1296 1042 200 46 72 chr5 27973763 27974108 -171656042 + L1MC3 LINE L1 5966 6301 -1764 313 264 123 43 chr5 27974132 27974295 -171655855 - L1M4 LINE L1 -3157 2989 2814 4800 209 35 63 chr5 27974335 27975715 -171654435 + L1MC3 LINE L1 6327 7668 -397 711 221 22 50 chr5 27975716 27975938 -171654212 + L1MC3 LINE L1 7819 8034 -31 1687 147 13 121 chr5 27975940 27976327 -171653823 - MER7A DNA MER2_type -1 345 3 23 0 0 0 chr5 27976666 27976689 -171653461 + AT_rich Low_complexity Low_complexity 1 23 0 2554 115 3 3 chr5 27976881 27977255 -171652895 + THE1C LTR MaLR 2 375 0 9592 146 28 5 chr5 27977255 27978799 -171651351 + THE1C-int LTR MaLR 1 1580 0 2465 99 16 37 chr5 27978799 27979181 -171650969 + THE1C LTR MaLR 1 374 -1 261 128 43 0 chr5 27980090 27980137 -171650013 + L1MC4 LINE L1 6652 6700 -1342 26 50 0 0 chr5 27980297 27980337 -171649813 + AT_rich Low_complexity Low_complexity 1 40 0 22 35 0 0 chr5 27980567 27980596 -171649554 + AT_rich Low_complexity Low_complexity 1 29 0 3625 150 0 2 chr5 27981103 27981690 -171648460 - L1PA13 LINE L1 -11 6152 5567 5122 149 14 5 chr5 27981697 27983233 -171646917 + L1PA15 LINE L1 4619 6160 -5 5355 260 36 45 chr5 27983233 27986602 -171643548 - L1PA13 LINE L1 -2943 3854 1 321 125 0 18 chr5 27986610 27986666 -171643484 + L1MB7 LINE L1 6111 6165 -19 30 0 0 0 chr5 27986989 27987019 -171643131 + AT_rich Low_complexity Low_complexity 1 30 0 31 26 0 0 chr5 27987156 27987194 -171642956 + AT_rich Low_complexity Low_complexity 1 38 0 1650 208 19 19 chr5 27988417 27988782 -171641368 - MLT1A1 LTR MaLR 0 365 1 29 0 0 0 chr5 27989130 27989159 -171640991 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 27989911 27989953 -171640197 + AT_rich Low_complexity Low_complexity 1 42 0 1317 268 105 22 chr5 27991030 27991766 -171638384 - L1M4 LINE L1 -2260 3886 3090 23 0 0 0 chr5 27991805 27991828 -171638322 + AT_rich Low_complexity Low_complexity 1 23 0 1598 147 14 11 chr5 27991835 27992120 -171638030 - L1MA6 LINE L1 -5 6295 6010 2507 107 80 5 chr5 27992120 27992511 -171637639 + L1PA11 LINE L1 5743 6174 0 1392 266 49 4 chr5 27992519 27992985 -171637165 + L1MB8 LINE L1 3569 4055 -2091 * 1728 226 68 3 chr5 27992974 27993501 -171636649 + L1MB8 LINE L1 5513 6117 -67 358 261 139 35 chr5 27993511 27993626 -171636524 + MER5A DNA MER1_type 60 186 -3 333 310 0 120 chr5 27993869 27994069 -171636081 - MER5B DNA MER1_type -1 177 2 257 254 197 0 chr5 27994377 27994448 -171635702 - L2 LINE L2 -30 3242 3158 325 291 156 7 chr5 27994843 27994984 -171635166 - MER5B DNA MER1_type -16 162 1 213 259 51 134 chr5 27995481 27995659 -171634491 - L2 LINE L2 -10 3303 3112 1955 117 7 3 chr5 27995659 27995972 -171634178 + AluSp SINE Alu 1 314 0 213 259 51 134 chr5 27995972 27996063 -171634087 - L2 LINE L2 -201 3112 3064 2102 101 14 3 chr5 27996063 27996360 -171633790 + AluSc SINE Alu 1 300 -9 213 259 51 134 chr5 27996360 27996424 -171633726 - L2 LINE L2 -249 3064 2996 623 278 55 3 chr5 27997309 27997600 -171632550 + Charlie4a DNA MER1_type 77 382 -126 31 44 0 0 chr5 27997919 27997964 -171632186 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr5 27998595 27998630 -171631520 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 27998832 27998863 -171631287 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr5 27999121 27999158 -171630992 + AT_rich Low_complexity Low_complexity 1 37 0 680 285 61 20 chr5 27999584 27999830 -171630320 + MIR SINE MIR 7 262 0 21 82 0 0 chr5 28000636 28000685 -171629465 + AT_rich Low_complexity Low_complexity 1 49 0 24 53 0 0 chr5 28002719 28002757 -171627393 + AT_rich Low_complexity Low_complexity 1 38 0 888 192 158 0 chr5 28003789 28003992 -171626158 - MER46A DNA MER2_type -1 235 1 219 242 0 0 chr5 28004124 28004186 -171625964 + (TA)n Simple_repeat Simple_repeat 1 62 0 1439 265 25 92 chr5 28004493 28005124 -171625026 + MLT1E LTR MaLR 1 589 -4 776 165 88 29 chr5 28005390 28005652 -171624498 + MER44D DNA MER2_type 2 517 -92 1135 184 43 4 chr5 28005655 28005889 -171624261 - Tigger2a DNA MER2_type 0 444 202 534 175 62 0 chr5 28005890 28005987 -171624163 + AluSq/x SINE Alu 3 105 -208 951 212 13 42 chr5 28006045 28006281 -171623869 - Tigger2a DNA MER2_type -205 229 1 382 237 66 0 chr5 28006281 28006356 -171623794 + MER44D DNA MER2_type 523 602 -7 240 86 0 0 chr5 28006475 28006510 -171623640 + (TC)n Simple_repeat Simple_repeat 1 35 0 24 85 0 0 chr5 28006726 28006785 -171623365 + AT_rich Low_complexity Low_complexity 1 59 0 207 94 38 19 chr5 28006787 28006840 -171623310 + A-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr5 28006840 28006866 -171623284 + AT_rich Low_complexity Low_complexity 1 26 0 636 244 2 5 chr5 28006866 28007058 -171623092 + L1MB5 LINE L1 5660 5849 -325 21 36 0 0 chr5 28007060 28007088 -171623062 + AT_rich Low_complexity Low_complexity 1 28 0 4032 189 33 9 chr5 28007282 28008665 -171621485 + L1PB4 LINE L1 4376 5791 -365 422 202 16 33 chr5 28008665 28008848 -171621302 + (TA)n Simple_repeat Simple_repeat 1 180 0 1731 182 62 0 chr5 28008891 28009232 -171620918 + L1PB4 LINE L1 5782 6143 -13 28 71 0 0 chr5 28009265 28009321 -171620829 + AT_rich Low_complexity Low_complexity 1 56 0 2245 60 0 18 chr5 28009675 28009959 -171620191 + AluY SINE Alu 1 279 -32 360 0 0 0 chr5 28009959 28009999 -171620151 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1187 211 19 0 chr5 28010013 28010273 -171619877 + L1MA9 LINE L1 6010 6274 -38 28 0 0 0 chr5 28010273 28010301 -171619849 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 28010956 28010978 -171619172 + AT_rich Low_complexity Low_complexity 1 22 0 315 336 17 9 chr5 28011898 28012014 -171618136 + MIR3 SINE MIR 87 203 -5 26 0 0 0 chr5 28012525 28012551 -171617599 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 28012617 28012638 -171617512 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr5 28013204 28013233 -171616917 + (TA)n Simple_repeat Simple_repeat 2 30 0 717 312 66 45 chr5 28013734 28014308 -171615842 - ERVL LTR ERVL -102 5662 5077 1864 102 18 21 chr5 28014321 28014604 -171615546 + AluSx SINE Alu 29 310 -2 1005 293 43 29 chr5 28014651 28015367 -171614783 - ERVL LTR ERVL -932 4832 4053 709 261 118 62 chr5 28016650 28017056 -171613094 + MLT1E2 LTR MaLR 21 449 -177 12475 237 34 17 chr5 28018784 28021331 -171608819 - L1PA16 LINE L1 -9 7595 5092 1575 105 18 0 chr5 28021331 28021580 -171608570 - AluY SINE Alu 0 315 63 12475 237 34 17 chr5 28021580 28021882 -171608268 - L1PA16 LINE L1 -2512 5092 4797 341 22 22 0 chr5 28021882 28021928 -171608222 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 12475 237 34 17 chr5 28021928 28024347 -171605803 - L1PA16 LINE L1 -2807 4797 2197 296 320 0 0 chr5 28024594 28024691 -171605459 - L1PA16 LINE L1 -5400 2181 2085 574 330 33 48 chr5 28024745 28025285 -171604865 - L1PA16 LINE L1 -6167 1407 876 284 222 69 0 chr5 28025399 28025471 -171604679 - MIR SINE MIR -110 152 76 24 96 0 0 chr5 28025799 28025872 -171604278 + AT_rich Low_complexity Low_complexity 1 73 0 22 70 0 0 chr5 28026717 28026760 -171603390 + AT_rich Low_complexity Low_complexity 1 43 0 1648 138 78 67 chr5 28030172 28030543 -171599607 - THE1C LTR MaLR 0 375 1 1483 301 87 15 chr5 28030693 28031277 -171598873 - MLT1E2 LTR MaLR 0 626 1 281 257 134 34 chr5 28031818 28031997 -171598153 - MIR SINE MIR 0 262 66 356 268 71 42 chr5 28032729 28032897 -171597253 - MLT1J2 LTR MaLR 0 450 278 405 301 98 20 chr5 28033246 28033399 -171596751 + Charlie1 DNA MER1_type 7 171 -2590 305 314 17 0 chr5 28033432 28033550 -171596600 + Charlie1 DNA MER1_type 2637 2756 -5 21 89 0 0 chr5 28033604 28033660 -171596490 + AT_rich Low_complexity Low_complexity 1 56 0 3946 164 25 31 chr5 28033864 28034668 -171595482 - Tigger3b DNA MER2_type 0 1231 433 1791 174 81 0 chr5 28034647 28034980 -171595170 - Tigger3b DNA MER2_type -869 362 3 * 215 215 28 9 chr5 28034992 28035099 -171595051 + (TA)n Simple_repeat Simple_repeat 1 109 0 1587 299 119 27 chr5 28035100 28037624 -171592526 + L1ME2 LINE L1 1306 4019 -2196 734 258 219 7 chr5 28037691 28038148 -171592002 + L1ME2 LINE L1 4864 5417 -798 305 283 22 0 chr5 28038162 28038254 -171591896 + L1ME2 LINE L1 5450 5543 -704 452 261 23 28 chr5 28038311 28038487 -171591663 + L1ME2 LINE L1 5905 6079 -154 213 94 0 0 chr5 28038657 28038689 -171591461 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2919 176 96 20 chr5 28038913 28039573 -171590577 - MER67C LTR ERV1 0 710 1 378 269 10 10 chr5 28039717 28039821 -171590329 + L1MC2 LINE L1 6239 6342 -2 1234 164 14 0 chr5 28140242 28140461 -171489689 - HERVH LTR ERV1 -4352 3361 3140 * 11147 138 6 34 chr5 28140440 28142369 -171487781 - HERVH LTR ERV1 -4718 2995 1122 1025 164 35 0 chr5 28143300 28143471 -171486679 - AluJo SINE Alu -16 296 120 644 278 49 31 chr5 28143625 28143932 -171486218 + MLT1A1 LTR MaLR 1 353 -12 241 283 28 57 chr5 28143994 28144100 -171486050 - MIR SINE MIR -126 136 34 22 0 0 0 chr5 28144270 28144292 -171485858 + AT_rich Low_complexity Low_complexity 1 22 0 2656 192 39 59 chr5 28144718 28145218 -171484932 - L1MA5A LINE L1 0 6297 5833 1865 56 0 0 chr5 28145218 28145452 -171484698 - L1PA5 LINE L1 0 6154 5921 2656 192 39 59 chr5 28145452 28145821 -171484329 - L1MA5A LINE L1 -464 5833 5458 2268 121 8 5 chr5 28145929 28146300 -171483850 - L1P LINE L1 -3861 2285 1914 * 6494 92 1 4 chr5 28146296 28147210 -171482940 + L1P LINE L1 3758 4668 -1478 7374 42 0 1 chr5 28147210 28148935 -171481215 + L1PA3 LINE L1 4429 6152 -3 637 225 78 75 chr5 28148955 28149329 -171480821 - L1M4 LINE L1 -1387 4759 4385 23 0 0 0 chr5 28149336 28149359 -171480791 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 28149438 28149461 -171480689 + AT_rich Low_complexity Low_complexity 1 23 0 421 324 158 3 chr5 28149758 28150094 -171480056 - L2 LINE L2 -1665 1649 1262 5728 120 5 2 chr5 28150102 28150969 -171479181 - L1PA13 LINE L1 -2 6161 5293 * 6120 185 18 1 chr5 28150959 28152362 -171477788 - L1P4 LINE L1 -645 5523 4102 327 274 16 32 chr5 28152466 28152590 -171477560 + MER110-int LTR ERV1 3297 3418 -1229 * 687 298 44 46 chr5 28152589 28152978 -171477172 + MER110-int LTR ERV1 3978 4365 -282 2573 108 3 0 chr5 28153261 28153613 -171476537 + THE1A LTR MaLR 3 355 0 10805 106 5 23 chr5 28153613 28155203 -171474947 + THE1A-int LTR MaLR 1 1561 -19 2630 91 6 0 chr5 28155205 28155558 -171474592 + THE1A LTR MaLR 1 355 0 1957 143 26 52 chr5 28155925 28156310 -171473840 + THE1C LTR MaLR 1 375 0 341 252 111 22 chr5 28156371 28156506 -171473644 + MER110 LTR ERV1 359 482 -3 180 0 0 0 chr5 28158226 28158246 -171471904 + (CATTT)n Simple_repeat Simple_repeat 4 23 0 282 257 0 0 chr5 28158547 28158621 -171471529 - MER92A LTR ERV1 0 412 339 374 179 155 0 chr5 28158802 28158886 -171471264 - MER92A LTR ERV1 -315 97 1 1183 174 0 5 chr5 28158930 28159131 -171471019 + L1P3 LINE L1 10 209 -6252 2487 132 0 19 chr5 28159136 28159554 -171470596 + L1P3 LINE L1 2297 2706 -3755 22 0 0 0 chr5 28161316 28161338 -171468812 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 28161712 28161733 -171468417 + AT_rich Low_complexity Low_complexity 1 21 0 436 16 33 0 chr5 28162296 28162357 -171467793 + (TA)n Simple_repeat Simple_repeat 1 63 0 22 80 0 0 chr5 28162560 28162610 -171467540 + AT_rich Low_complexity Low_complexity 1 50 0 27 0 0 0 chr5 28163410 28163437 -171466713 + AT_rich Low_complexity Low_complexity 1 27 0 23 78 0 0 chr5 28164155 28164206 -171465944 + AT_rich Low_complexity Low_complexity 1 51 0 2289 67 7 14 chr5 28164712 28165009 -171465141 - AluY SINE Alu -16 295 1 21 0 0 0 chr5 28165441 28165462 -171464688 + AT_rich Low_complexity Low_complexity 1 21 0 1778 177 5 39 chr5 28166392 28166804 -171463346 + L1 LINE L1 4146 4543 -1603 519 322 33 11 chr5 28166914 28167097 -171463053 + MER5A DNA MER1_type 1 187 -2 191 353 49 43 chr5 28167905 28168089 -171462061 + L2 LINE L2 299 483 -2831 181 0 0 65 chr5 28168238 28168269 -171461881 + (GAAA)n Simple_repeat Simple_repeat 2 30 0 304 385 86 20 chr5 28168325 28168823 -171461327 + L2 LINE L2 668 1198 -2116 35 71 0 0 chr5 28170814 28170884 -171459266 + AT_rich Low_complexity Low_complexity 1 70 0 609 149 0 0 chr5 28171193 28171287 -171458863 + AluS SINE Alu 1 94 -218 548 365 180 15 chr5 28171539 28172402 -171457748 + L2 LINE L2 1837 2841 -473 433 270 104 24 chr5 28172885 28173096 -171457054 + L1ME LINE L1 4145 4372 -1774 519 220 0 0 chr5 28173151 28173242 -171456908 + FLAM_A SINE Alu 16 106 -36 360 0 0 0 chr5 28173242 28173282 -171456868 + (TC)n Simple_repeat Simple_repeat 2 41 0 285 68 17 34 chr5 28173281 28173340 -171456810 + (TA)n Simple_repeat Simple_repeat 1 58 0 * 1546 282 50 49 chr5 28173408 28173563 -171456587 + L1ME LINE L1 4466 4619 -1547 2147 53 50 27 chr5 28173563 28173864 -171456286 - AluY SINE Alu -3 308 1 1546 282 50 49 chr5 28173864 28174915 -171455235 + L1ME LINE L1 4619 5662 -504 21 71 0 0 chr5 28177897 28177939 -171452211 + AT_rich Low_complexity Low_complexity 1 42 0 6815 216 48 14 chr5 28178394 28180214 -171449936 - L1 LINE L1 -2114 4992 3111 5899 251 62 54 chr5 28180208 28181248 -171448902 - L1 LINE L1 -3890 3216 2186 * 2402 129 3 6 chr5 28181248 28181613 -171448537 + THE1B LTR MaLR 1 364 0 5899 251 62 54 chr5 28181613 28183098 -171447052 - L1 LINE L1 -4920 2186 10 954 345 106 26 chr5 28184764 28185269 -171444881 + L2 LINE L2 2260 2863 -450 1717 128 37 10 chr5 28185269 28185565 -171444585 - AluSx SINE Alu -8 304 1 954 345 106 26 chr5 28185565 28185870 -171444280 + L2 LINE L2 2863 3142 -171 21 82 0 0 chr5 28186011 28186060 -171444090 + AT_rich Low_complexity Low_complexity 1 49 0 1020 219 85 54 chr5 28187664 28188016 -171442134 - MLT1A1 LTR MaLR 0 365 3 203 152 0 0 chr5 28188208 28188241 -171441909 + A-rich Low_complexity Low_complexity 4 36 0 360 0 0 0 chr5 28188996 28189036 -171441114 + (TA)n Simple_repeat Simple_repeat 2 41 0 207 283 81 20 chr5 28189038 28189137 -171441013 + L2 LINE L2 2529 2633 -681 219 277 182 19 chr5 28189177 28189336 -171440814 - MIR SINE MIR -13 249 65 545 317 102 20 chr5 28189675 28189968 -171440182 + L2 LINE L2 2632 2948 -366 241 318 0 0 chr5 28190157 28190220 -171439930 + L2 LINE L2 3251 3313 0 338 324 28 28 chr5 28191007 28191183 -171438967 - MIR SINE MIR -64 198 23 458 255 137 63 chr5 28192429 28192700 -171437450 - L2 LINE L2 -8 3305 3015 219 291 29 58 chr5 28192924 28193027 -171437123 - L2 LINE L2 -820 2494 2395 234 220 0 0 chr5 28193031 28193090 -171437060 + CT-rich Low_complexity Low_complexity 1 59 0 710 127 35 12 chr5 28193128 28193301 -171436849 + CT-rich Low_complexity Low_complexity 4 180 0 21 0 0 0 chr5 28193376 28193397 -171436753 + AT_rich Low_complexity Low_complexity 1 21 0 631 248 60 41 chr5 28193593 28193961 -171436189 + L1ME3A LINE L1 5276 5650 -520 2010 164 22 27 chr5 28193961 28194327 -171435823 - THE1B LTR MaLR 0 364 1 5443 130 9 2 chr5 28194327 28195128 -171435022 - THE1B-int LTR MaLR 0 1580 775 1004 243 35 52 chr5 28195128 28195474 -171434676 - LTR9 LTR ERV1 0 612 273 686 182 10 76 chr5 28195731 28195929 -171434221 - LTR9-int LTR ERV1 -560 4320 2388 * 5316 173 92 47 chr5 28195927 28196978 -171433172 - LTR9-int LTR ERV1 -5314 2104 1102 360 0 0 0 chr5 28196978 28197018 -171433132 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5316 173 92 47 chr5 28197018 28197059 -171433091 - LTR9-int LTR ERV1 -6316 1102 1064 188 261 109 0 chr5 28197059 28197151 -171432999 + MER5C DNA MER1_type 1 102 -222 5316 173 92 47 chr5 28197151 28197848 -171432302 - LTR9-int LTR ERV1 -6354 1064 749 1295 228 14 24 chr5 28197866 28198160 -171431990 - LTR9-int LTR ERV1 -6884 534 244 316 206 59 0 chr5 28198153 28198221 -171431929 - LTR9-int LTR ERV1 -7322 96 25 * 1381 263 36 80 chr5 28198255 28198895 -171431255 - LTR9 LTR ERV1 0 612 1 5094 132 14 3 chr5 28198895 28199664 -171430486 - THE1-int LTR MaLR -799 781 1 1912 150 33 19 chr5 28199664 28200023 -171430127 - THE1B LTR MaLR 0 364 1 356 326 81 8 chr5 28200035 28200271 -171429879 + L1ME3A LINE L1 5658 5910 -260 251 326 33 49 chr5 28200285 28200469 -171429681 + ERVL LTR ERVL 3318 3498 -2266 1689 169 31 41 chr5 28200550 28200941 -171429209 - MLT1B LTR MaLR -3 387 1 258 32 0 0 chr5 28201565 28201596 -171428554 + (TA)n Simple_repeat Simple_repeat 2 32 0 510 281 79 6 chr5 28202069 28202247 -171427903 + L1 LINE L1 2585 2775 -3371 8223 116 23 8 chr5 28202248 28203595 -171426555 - L1P LINE L1 -2388 3758 2392 3863 88 26 27 chr5 28203740 28204323 -171425827 + L1PA7 LINE L1 5565 6146 -8 5092 249 20 17 chr5 28204330 28205902 -171424248 + L1 LINE L1 2752 4327 -1819 1593 202 16 3 chr5 28205902 28206219 -171423931 + L1PA16 LINE L1 5829 6149 -17 232 286 157 0 chr5 28206253 28206393 -171423757 - L1M4 LINE L1 -2591 3555 3394 384 346 39 0 chr5 28206558 28206685 -171423465 - MIR3 SINE MIR -12 196 65 21 57 0 0 chr5 28207036 28207071 -171423079 + AT_rich Low_complexity Low_complexity 1 35 0 1933 157 34 10 chr5 28207537 28208052 -171422098 - MLT2A2 LTR ERVL 0 554 1 628 264 140 13 chr5 28208419 28208654 -171421496 - MER45C DNA AcHobo -1 952 688 256 0 0 71 chr5 28209174 28209216 -171420934 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1215 269 82 65 chr5 28210591 28211149 -171419001 + MLT1E LTR MaLR 7 574 -19 272 179 18 0 chr5 28211844 28211900 -171418250 - FAM SINE Alu -7 172 116 2115 164 37 28 chr5 28211900 28212445 -171417705 + MLT2A2 LTR ERVL 1 554 0 1231 182 12 43 chr5 28212445 28212698 -171417452 - AluJo SINE Alu -67 245 1 1866 193 20 11 chr5 28214057 28214415 -171415735 - MLT1A1 LTR MaLR -4 361 1 334 279 130 19 chr5 28214565 28214726 -171415424 - MIR SINE MIR -6 256 78 55 40 0 0 chr5 28214917 28214993 -171415157 + AT_rich Low_complexity Low_complexity 1 76 0 1038 229 67 80 chr5 28216865 28217240 -171412910 - MLT1A2 LTR MaLR 0 374 5 25 51 0 0 chr5 28217773 28217812 -171412338 + AT_rich Low_complexity Low_complexity 1 39 0 288 116 0 0 chr5 28218469 28218512 -171411638 + MADE1 DNA Mariner 38 80 0 4231 221 29 50 chr5 28218512 28218995 -171411155 + L1MC3 LINE L1 6409 6901 -884 183 80 0 0 chr5 28218995 28219020 -171411130 + (CA)n Simple_repeat Simple_repeat 2 26 0 4231 221 29 50 chr5 28219020 28219750 -171410400 + L1MC3 LINE L1 6901 7596 -189 1891 139 147 21 chr5 28219765 28220145 -171410005 + MSTA LTR MaLR 1 428 0 304 287 65 70 chr5 28220367 28220597 -171409553 - Charlie8 DNA MER1_type -2153 264 36 2814 184 114 10 chr5 28222120 28222725 -171407425 - L1PA16 LINE L1 -4 6162 5495 3019 276 29 41 chr5 28222726 28224375 -171405775 + L1PA12 LINE L1 2828 4459 -3125 612 183 30 18 chr5 28224546 28224715 -171405435 + L1MC3 LINE L1 7613 7783 -2 3309 153 50 31 chr5 28225136 28225816 -171404334 - L1MA7 LINE L1 -5 6286 5594 378 121 0 0 chr5 28226349 28226415 -171403735 + (TC)n Simple_repeat Simple_repeat 1 66 0 4963 226 28 20 chr5 28227273 28228638 -171401512 + L1 LINE L1 4616 5991 -1593 747 164 105 33 chr5 28228641 28228793 -171401357 - THE1B LTR MaLR 0 364 202 363 313 90 30 chr5 28228795 28228961 -171401189 + MLT1C LTR MaLR 292 467 0 771 262 183 37 chr5 28229360 28229742 -171400408 + MLT1D LTR MaLR 68 505 0 206 292 14 14 chr5 28231627 28231699 -171398451 + (TA)n Simple_repeat Simple_repeat 2 73 0 229 389 48 31 chr5 28231745 28231974 -171398176 - L2 LINE L2 -149 3164 2932 2983 221 40 47 chr5 28232044 28232560 -171397590 - L1MB8 LINE L1 -12 6166 5648 1474 184 52 52 chr5 28232560 28232924 -171397226 - THE1B LTR MaLR 0 364 1 2983 221 40 47 chr5 28232924 28233609 -171396541 - L1MB8 LINE L1 -530 5648 4972 1999 101 22 4 chr5 28233609 28233886 -171396264 - AluSx SINE Alu -23 289 8 2983 221 40 47 chr5 28233886 28234011 -171396139 - L1MB8 LINE L1 -1206 4972 4848 1076 257 96 43 chr5 28234022 28234461 -171395689 + L1M4 LINE L1 -252 209 -6071 1708 234 56 63 chr5 28234491 28235081 -171395069 + L1M4 LINE L1 281 866 -5414 1451 222 63 122 chr5 28235076 28235447 -171394703 + L1M4 LINE L1 1160 1551 -4833 * 2095 83 0 21 chr5 28235447 28235735 -171394415 + AluSx SINE Alu 1 282 -30 340 98 0 0 chr5 28235735 28235786 -171394364 + Alu SINE Alu 250 300 0 1451 222 63 122 chr5 28235786 28236189 -171393961 + L1M4 LINE L1 1549 1903 -4481 230 169 85 0 chr5 28236211 28236270 -171393880 + L1M4 LINE L1 2025 2088 -4296 391 229 90 0 chr5 28236363 28236485 -171393665 + L1MB7 LINE L1 5800 5932 -242 * 683 243 28 0 chr5 28236484 28236665 -171393485 - L1M4 LINE L1 -3377 3580 3395 4780 258 49 55 chr5 28236666 28237213 -171392937 - L1M4 LINE L1 -5215 1644 1095 180 0 0 0 chr5 28237213 28237233 -171392917 + (TC)n Simple_repeat Simple_repeat 1 20 0 4780 258 49 55 chr5 28237233 28237407 -171392743 - L1M4 LINE L1 -5764 1095 921 480 61 0 0 chr5 28237407 28237473 -171392677 - L1PA6 LINE L1 -3 6151 6086 4780 258 49 55 chr5 28237473 28238372 -171391778 - L1M4 LINE L1 -5938 921 33 317 211 0 0 chr5 28238883 28238940 -171391210 + L1P4 LINE L1 1 57 -6730 3861 97 20 46 chr5 28238940 28239546 -171390604 - LTR14B LTR ERVK 0 608 19 17571 220 28 8 chr5 28239553 28240283 -171389867 + L1P4 LINE L1 66 780 -6039 332 43 22 0 chr5 28240283 28240329 -171389821 + (TG)n Simple_repeat Simple_repeat 1 47 0 17571 220 28 8 chr5 28240329 28245576 -171384574 + L1P4 LINE L1 780 6174 -645 5728 120 5 2 chr5 28245566 28246433 -171383717 + L1PA13 LINE L1 5293 6161 -2 * 428 321 158 3 chr5 28246441 28246777 -171383373 + L2 LINE L2 1262 1649 -1665 23 0 0 0 chr5 28247074 28247097 -171383053 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 28247176 28247199 -171382951 + AT_rich Low_complexity Low_complexity 1 23 0 655 224 77 77 chr5 28247206 28247581 -171382569 + L1ME2 LINE L1 4385 4759 -1387 7481 36 0 0 chr5 28247601 28249047 -171381103 - L1PA3 LINE L1 -3 6152 4707 1299 7 0 0 chr5 28249047 28249195 -171380955 + L1PA3 LINE L1 4554 4701 -1445 474 283 102 44 chr5 28249191 28249672 -171380478 + L1ME2 LINE L1 4747 5255 -891 * 556 297 128 23 chr5 28249722 28250150 -171380000 + L1ME2 LINE L1 5329 5801 -363 240 35 0 0 chr5 28250188 28250217 -171379933 + (TG)n Simple_repeat Simple_repeat 2 30 0 416 211 13 122 chr5 28250384 28250540 -171379610 + L1MA9 LINE L1 6153 6291 0 713 242 86 17 chr5 28250546 28250853 -171379297 + L1ME2 LINE L1 5815 6145 -19 237 232 0 18 chr5 28251297 28251353 -171378797 + (TG)n Simple_repeat Simple_repeat 2 56 0 1669 100 155 7 chr5 28253896 28254167 -171375983 - AluSx SINE Alu -1 311 1 2128 143 0 0 chr5 28254308 28254615 -171375535 + AluSx SINE Alu 1 307 -5 697 236 67 84 chr5 28255416 28255700 -171374450 - MER21B LTR ERV1 -93 770 492 21 57 0 0 chr5 28255921 28255956 -171374194 + AT_rich Low_complexity Low_complexity 1 35 0 27 49 0 0 chr5 28256852 28256893 -171373257 + AT_rich Low_complexity Low_complexity 1 41 0 981 284 48 44 chr5 28257600 28258058 -171372092 - L1ME1 LINE L1 -3 6163 5704 1552 106 38 4 chr5 28258217 28258454 -171371696 - AluSx SINE Alu -16 296 52 412 263 168 36 chr5 28258457 28258731 -171371419 - L1ME1 LINE L1 -841 5305 4996 279 287 41 107 chr5 28258825 28259142 -171371008 + MLT1F1-int LTR MaLR 1076 1371 0 1926 267 30 25 chr5 28259149 28259707 -171370443 + MLT1F1 LTR MaLR 7 567 0 21 36 0 0 chr5 28259969 28259997 -171370153 + AT_rich Low_complexity Low_complexity 1 28 0 1360 117 5 0 chr5 28260280 28260497 -171369653 + AluSg/x SINE Alu 86 303 0 252 268 236 16 chr5 28261302 28261425 -171368725 - MIR SINE MIR -100 162 13 38 39 0 0 chr5 28261585 28261637 -171368513 + AT_rich Low_complexity Low_complexity 1 52 0 2263 61 3 10 chr5 28262346 28262639 -171367511 - AluY SINE Alu -4 307 17 25 51 0 0 chr5 28262760 28262799 -171367351 + AT_rich Low_complexity Low_complexity 1 39 0 27 29 0 0 chr5 28262836 28262870 -171367280 + AT_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr5 28263247 28263278 -171366872 + AT_rich Low_complexity Low_complexity 1 31 0 958 231 0 42 chr5 28265243 28265507 -171364643 - L1MD1 LINE L1 -217 6025 5773 189 0 0 0 chr5 28266731 28266752 -171363398 + (TC)n Simple_repeat Simple_repeat 2 22 0 234 91 0 0 chr5 28266753 28266786 -171363364 + (TATG)n Simple_repeat Simple_repeat 2 34 0 189 276 103 52 chr5 28266810 28266926 -171363224 + L2 LINE L2 1311 1432 -1882 713 331 39 16 chr5 28267152 28267460 -171362690 + LTR16A1 LTR ERVL 143 457 0 2053 125 0 0 chr5 28270732 28271013 -171359137 + AluSg SINE Alu 14 294 -16 32 43 0 0 chr5 28272378 28272424 -171357726 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr5 28272588 28272611 -171357539 + AT_rich Low_complexity Low_complexity 1 23 0 331 304 77 43 chr5 28273383 28273760 -171356390 + L1MEd LINE L1 988 1435 -4875 2503 48 0 0 chr5 28273760 28274055 -171356095 + AluY SINE Alu 1 295 -16 331 304 77 43 chr5 28274055 28274186 -171355964 + L1MEd LINE L1 1435 1560 -4750 251 195 24 24 chr5 28274628 28274710 -171355440 + (TCTA)n Simple_repeat Simple_repeat 2 83 0 516 272 143 0 chr5 28275033 28275180 -171354970 + MIR SINE MIR 2 169 -93 23 33 0 0 chr5 28276113 28276143 -171354007 + AT_rich Low_complexity Low_complexity 1 30 0 288 228 43 33 chr5 28276827 28276919 -171353231 + MER5A DNA MER1_type 4 96 -93 23 33 0 0 chr5 28278108 28278138 -171352012 + AT_rich Low_complexity Low_complexity 1 30 0 27 29 0 0 chr5 28279295 28279329 -171350821 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr5 28279534 28279563 -171350587 + AT_rich Low_complexity Low_complexity 1 29 0 248 371 21 10 chr5 28280580 28280677 -171349473 + MER91A DNA MER1_type 14 111 -85 2345 85 13 3 chr5 28281512 28281819 -171348331 - AluSg SINE Alu 0 310 1 1075 163 15 0 chr5 28282013 28282209 -171347941 + L1MB1 LINE L1 5970 6168 0 31 26 0 0 chr5 28282299 28282337 -171347813 + AT_rich Low_complexity Low_complexity 1 38 0 230 300 12 0 chr5 28282829 28282909 -171347241 - MER103 DNA DNA -55 111 31 2493 204 63 87 chr5 28283004 28283725 -171346425 - L1MB8 LINE L1 -6 6172 5474 5307 16 13 3 chr5 28283725 28284358 -171345792 - L1PA2 LINE L1 -1 6154 5516 2493 204 63 87 chr5 28284358 28284521 -171345629 - L1MB8 LINE L1 -704 5474 5309 717 185 6 25 chr5 28284541 28284703 -171345447 - L1MB3 LINE L1 -3 6180 6022 6950 174 75 114 chr5 28284706 28284946 -171345204 - L1M4c LINE L1 -4222 2162 1914 798 163 0 15 chr5 28284946 28285081 -171345069 + FLAM_C SINE Alu 1 133 0 6950 174 75 114 chr5 28285081 28286118 -171344032 - L1M4c LINE L1 -4470 1914 867 692 156 52 22 chr5 28286118 28286253 -171343897 - AluJb SINE Alu -173 139 1 6950 174 75 114 chr5 28286253 28287070 -171343080 - L1M4c LINE L1 -5517 867 20 1199 255 24 14 chr5 28288071 28288440 -171341710 + L1MB8 LINE L1 5746 6118 -60 1687 162 73 20 chr5 28288501 28288602 -171341548 - L1MA8 LINE L1 -5 6286 6192 258 81 0 0 chr5 28288602 28288639 -171341511 + (TG)n Simple_repeat Simple_repeat 2 38 0 1687 162 73 20 chr5 28288639 28289314 -171340836 - L1MA8 LINE L1 -99 6192 5377 807 189 37 98 chr5 28289497 28289741 -171340409 - MLT1-int LTR MaLR -723 648 420 281 228 0 0 chr5 28290004 28290061 -171340089 + HERVL68 LTR ERVL 2724 2780 -257 2704 19 0 0 chr5 28290314 28290623 -171339527 + AluYa5 SINE Alu 1 309 -2 253 410 6 6 chr5 28290709 28290870 -171339280 - L2 LINE L2 -557 2757 2597 1515 134 0 0 chr5 28291422 28291638 -171338512 - AluSg/x SINE Alu -13 297 82 27 49 0 0 chr5 28291880 28291921 -171338229 + AT_rich Low_complexity Low_complexity 1 41 0 983 251 43 0 chr5 28292455 28292734 -171337416 - MER63 DNA MER1_type -11 1049 759 1656 174 10 84 chr5 28292751 28293154 -171336996 + MLT1B LTR MaLR 1 373 -17 2279 174 20 3 chr5 28293155 28293545 -171336605 - MSTA LTR MaLR 0 428 32 387 237 61 18 chr5 28293584 28293698 -171336452 - MER63 DNA MER1_type -317 745 1 1508 206 44 12 chr5 28293920 28294260 -171335890 - L1MA4 LINE L1 -21 6279 5929 1329 188 51 8 chr5 28294260 28294516 -171335634 + L1M1 LINE L1 5504 5770 -530 2575 33 3 0 chr5 28294522 28294825 -171335325 - AluY SINE Alu -7 304 1 1061 347 71 40 chr5 28295899 28296853 -171333297 + L2 LINE L2 2308 3300 -13 202 349 65 61 chr5 28297159 28297388 -171332762 - MIR SINE MIR -9 253 24 194 81 27 0 chr5 28297646 28297683 -171332467 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 303 283 22 0 chr5 28298456 28298548 -171331602 + L1M LINE L1 5295 5388 -774 555 220 86 42 chr5 28298697 28299006 -171331144 + L1ME3A LINE L1 5133 5459 -743 282 200 47 24 chr5 28299032 28299117 -171331033 + L1ME3A LINE L1 5411 5497 -667 263 247 58 11 chr5 28299139 28299253 -171330897 + L1ME3A LINE L1 5481 5599 -565 3189 66 50 2 chr5 28299399 28299823 -171330327 - MLT2A1 LTR ERVL 0 444 1 27126 96 14 3 chr5 28299823 28305429 -171324721 - HERVL-A1 LTR ERVL 0 5654 1 2698 145 40 36 chr5 28305429 28305946 -171324204 - MLT2A1 LTR ERVL 0 515 1 603 269 83 27 chr5 28305993 28306157 -171323993 + L1ME3A LINE L1 5775 5928 -242 1661 241 23 43 chr5 28306157 28306672 -171323478 - MLT1D LTR MaLR 0 505 1 603 269 83 27 chr5 28306672 28306808 -171323342 + L1ME3A LINE L1 5928 6092 -78 284 287 0 0 chr5 28307524 28307611 -171322539 + (TA)n Simple_repeat Simple_repeat 1 87 0 338 318 48 26 chr5 28309717 28309906 -171320244 - MIR SINE MIR 0 262 70 26 0 0 0 chr5 28310382 28310408 -171319742 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr5 28310922 28310954 -171319196 + AT_rich Low_complexity Low_complexity 1 32 0 327 334 125 26 chr5 28310994 28311305 -171318845 + L1ME3A LINE L1 4759 5100 -1046 1043 205 19 0 chr5 28311423 28311628 -171318522 - MER2 DNA MER2_type -136 209 1 917 241 62 120 chr5 28311789 28312405 -171317745 + L1ME3A LINE L1 5261 5826 -344 1841 148 140 8 chr5 28312405 28312783 -171317367 - MSTA LTR MaLR 0 428 1 917 241 62 120 chr5 28312783 28313057 -171317093 + L1ME3A LINE L1 5826 6114 -56 32 42 0 42 chr5 28313062 28313134 -171317016 + AT_rich Low_complexity Low_complexity 1 69 0 11456 137 15 19 chr5 28313404 28315288 -171314862 + L1P LINE L1 11 1886 -4260 299 313 13 20 chr5 28315654 28315804 -171314346 + MERVL LTR ERVL 5185 5333 -152 478 319 99 45 chr5 28316050 28316363 -171313787 + LTR33 LTR ERVL 60 389 -132 708 186 88 44 chr5 28317692 28317896 -171312254 + LTR7 LTR ERV1 238 450 0 561 269 57 26 chr5 28318682 28318875 -171311275 + MIR SINE MIR 18 216 -46 246 284 37 0 chr5 28318987 28319096 -171311054 + (TA)n Simple_repeat Simple_repeat 2 114 0 837 261 63 66 chr5 28319185 28319242 -171310908 - MER92A LTR ERV1 0 412 356 1968 150 51 23 chr5 28319242 28319596 -171310554 - THE1B LTR MaLR 0 364 1 10986 111 10 6 chr5 28319596 28321169 -171308981 - THE1B-int LTR MaLR 0 1580 1 2101 145 48 20 chr5 28321171 28321523 -171308627 - THE1B LTR MaLR -2 362 1 837 261 63 66 chr5 28321523 28321871 -171308279 - MER92A LTR ERV1 -56 356 4 24 0 0 0 chr5 28322138 28322162 -171307988 + AT_rich Low_complexity Low_complexity 1 24 0 209 222 0 0 chr5 28322469 28322514 -171307636 + (TA)n Simple_repeat Simple_repeat 1 45 0 200 228 18 0 chr5 28322909 28322966 -171307184 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 296 188 14 0 chr5 28323357 28323426 -171306724 + (TA)n Simple_repeat Simple_repeat 2 71 0 1551 204 127 32 chr5 28323426 28323858 -171306292 - MLT2B2 LTR ERVL -40 475 3 23 0 0 0 chr5 28323979 28324002 -171306148 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 28324555 28324579 -171305571 + AT_rich Low_complexity Low_complexity 1 24 0 239 325 0 8 chr5 28324710 28324827 -171305323 + (TA)n Simple_repeat Simple_repeat 2 117 0 317 320 0 0 chr5 28325774 28325877 -171304273 + MER103 DNA DNA 3 105 -61 23 0 0 0 chr5 28326080 28326103 -171304047 + AT_rich Low_complexity Low_complexity 1 23 0 582 236 5 46 chr5 28326120 28326315 -171303835 - L1MC3 LINE L1 -1 7784 7598 410 192 0 0 chr5 28326356 28326434 -171303716 - L1MC3 LINE L1 -923 6862 6785 189 0 0 0 chr5 28326488 28326509 -171303641 + (A)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr5 28327301 28327329 -171302821 + AT_rich Low_complexity Low_complexity 1 28 0 376 235 25 17 chr5 28327707 28327826 -171302324 - L1MA10 LINE L1 -2 6332 6213 1389 186 28 28 chr5 28327847 28328057 -171302093 - MLT1B LTR MaLR 0 390 178 2804 105 84 0 chr5 28328057 28328475 -171301675 - MLT2A2 LTR ERVL 0 453 1 1389 186 28 28 chr5 28328475 28328555 -171301595 - MLT1B LTR MaLR -211 179 100 1735 117 0 0 chr5 28328573 28328813 -171301337 - AluSg/x SINE Alu 0 312 73 333 67 0 22 chr5 28328813 28328858 -171301292 + AluS SINE Alu 23 66 -236 293 148 22 237 chr5 28328851 28328923 -171301227 - MLT1B LTR MaLR -284 106 75 * 1977 124 3 16 chr5 28328923 28329229 -171300921 + AluSq SINE Alu 1 302 -11 293 148 22 237 chr5 28329229 28329291 -171300859 - MLT1B LTR MaLR -315 75 1 1722 246 107 17 chr5 28329322 28330259 -171299891 - L1ME1 LINE L1 -161 6005 4991 5357 8 2 0 chr5 28330269 28330893 -171299257 + L1PA2 LINE L1 5544 6168 0 6398 230 50 7 chr5 28331577 28334538 -171295612 + L1PA13 LINE L1 1 3148 -3649 358 254 196 33 chr5 28335828 28336134 -171294016 - MLT1E LTR MaLR 0 542 101 1823 243 67 2 chr5 28337160 28337650 -171292500 + L1M4 LINE L1 3623 4144 -2002 2567 200 6 30 chr5 28337667 28338161 -171291989 + MLT2B3 LTR ERVL 47 528 -26 2570 237 66 23 chr5 28338169 28339042 -171291108 + L1M4 LINE L1 4174 5084 -1062 189 0 0 0 chr5 28339564 28339585 -171290565 + (GA)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr5 28339591 28339612 -171290538 + AT_rich Low_complexity Low_complexity 1 21 0 1547 119 0 0 chr5 28340173 28340391 -171289759 + AluSx SINE Alu 1 218 -94 1920 144 6 16 chr5 28341288 28341600 -171288550 + AluSc SINE Alu 1 309 0 1965 141 0 3 chr5 28341613 28341897 -171288253 + AluSx SINE Alu 4 286 -26 276 245 49 10 chr5 28341945 28342047 -171288103 - L1ME4a LINE L1 -60 6061 5956 4935 106 91 120 chr5 28342100 28342115 -171288035 - pTR5 LTR ERV1 0 2438 2424 762 94 51 0 chr5 28342115 28342232 -171287918 - L1PA15 LINE L1 -4 6161 6039 4935 106 91 120 chr5 28342232 28343812 -171286338 - pTR5 LTR ERV1 -14 2424 136 2078 120 19 0 chr5 28343812 28344128 -171286022 - L1PA15 LINE L1 -121 6044 5723 24 0 0 0 chr5 28344904 28344928 -171285222 + AT_rich Low_complexity Low_complexity 1 24 0 4758 252 45 17 chr5 28346069 28348285 -171281865 - L1MB8 LINE L1 -2 6176 3860 3771 211 107 106 chr5 28348287 28350037 -171280113 + MER52A LTR ERV1 1 1751 -4 1280 251 44 32 chr5 28350043 28350540 -171279610 - L1MB8 LINE L1 -2299 3847 3345 32 86 0 0 chr5 28350561 28350642 -171279508 + AT_rich Low_complexity Low_complexity 1 81 0 230 307 33 43 chr5 28350684 28350987 -171279163 - L1M4 LINE L1 -2260 3886 3587 247 158 0 0 chr5 28351358 28351396 -171278754 - L1 LINE L1 -2475 3671 3634 22 35 0 0 chr5 28351554 28351583 -171278567 + AT_rich Low_complexity Low_complexity 1 29 0 1427 58 0 0 chr5 28351930 28352104 -171278046 - AluY SINE Alu 0 311 138 2006 298 100 22 chr5 28353051 28353962 -171276188 + L2 LINE L2 1716 2697 -617 2065 172 3 0 chr5 28353962 28354299 -171275851 - MER6A DNA MER2_type -267 338 1 1031 172 113 0 chr5 28354299 28354502 -171275648 - L1MC2 LINE L1 -421 5923 5698 498 380 22 47 chr5 28354509 28354833 -171275317 + L2 LINE L2 2722 3038 -275 434 360 66 4 chr5 28355472 28355714 -171274436 + MIR SINE MIR 5 261 -1 238 156 0 0 chr5 28355721 28355770 -171274380 - MLT2B2 LTR ERVL 0 464 424 251 232 0 0 chr5 28355784 28355840 -171274310 + (TA)n Simple_repeat Simple_repeat 2 57 0 201 121 0 0 chr5 28355852 28355885 -171274265 + (TG)n Simple_repeat Simple_repeat 2 34 0 378 0 0 0 chr5 28355885 28355927 -171274223 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 1605 193 145 22 chr5 28355927 28356327 -171273823 - MLT2B2 LTR ERVL -66 449 1 28 29 0 0 chr5 28356857 28356892 -171273258 + AT_rich Low_complexity Low_complexity 1 35 0 295 100 0 0 chr5 28357629 28357679 -171272471 - L1PA4 LINE L1 0 6155 6106 214 257 38 19 chr5 28358570 28358675 -171271475 + (TATG)n Simple_repeat Simple_repeat 2 108 0 2239 116 3 0 chr5 28359015 28359326 -171270824 - AluSx SINE Alu 0 312 1 239 300 14 14 chr5 28359549 28359619 -171270531 - L2 LINE L2 0 3272 3203 23 33 0 0 chr5 28360438 28360468 -171269682 + AT_rich Low_complexity Low_complexity 1 30 0 25 75 0 0 chr5 28360569 28360622 -171269528 + AT_rich Low_complexity Low_complexity 1 53 0 2123 136 16 35 chr5 28361126 28361495 -171268655 + THE1B LTR MaLR 3 364 0 29 0 0 0 chr5 28361931 28361960 -171268190 + AT_rich Low_complexity Low_complexity 1 29 0 1647 100 11 38 chr5 28362267 28362528 -171267622 + AluY SINE Alu 44 297 -14 619 229 0 0 chr5 28362528 28362650 -171267500 - AluJo/FLAM SINE Alu -190 122 1 899 256 5 19 chr5 28363136 28363347 -171266803 - MER58A DNA MER1_type -16 208 1 589 256 176 24 chr5 28364098 28364438 -171265712 + MSTD LTR MaLR 1 392 -4 946 229 30 120 chr5 28364800 28365201 -171264949 + MLT1A1 LTR MaLR 1 365 0 25 75 0 0 chr5 28365726 28365779 -171264371 + AT_rich Low_complexity Low_complexity 1 53 0 24 32 0 0 chr5 28366861 28366892 -171263258 + AT_rich Low_complexity Low_complexity 1 31 0 219 235 143 31 chr5 28367651 28367749 -171262401 - L2 LINE L2 -1 3271 3163 388 91 30 0 chr5 28419348 28419414 -171210736 + CT-rich Low_complexity Low_complexity 3 70 0 244 246 16 0 chr5 28419650 28419711 -171210439 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 27 49 0 0 chr5 28419960 28420001 -171210149 + AT_rich Low_complexity Low_complexity 1 41 0 265 347 38 20 chr5 28420606 28420774 -171209376 + MIR SINE MIR 42 212 -50 263 339 0 11 chr5 28420819 28420996 -171209154 + (CATA)n Simple_repeat Simple_repeat 2 176 0 2066 154 5 29 chr5 28421260 28421642 -171208508 - THE1C LTR MaLR -2 373 1 710 273 27 36 chr5 28421926 28422256 -171207894 - HAL1b LINE L1 -805 543 217 21 36 0 0 chr5 28422270 28422298 -171207852 + AT_rich Low_complexity Low_complexity 1 28 0 210 71 0 0 chr5 28422378 28422406 -171207744 + (TC)n Simple_repeat Simple_repeat 2 29 0 29 28 0 0 chr5 28423022 28423058 -171207092 + AT_rich Low_complexity Low_complexity 1 36 0 228 211 0 0 chr5 28423351 28423389 -171206761 + polypurine Low_complexity Low_complexity 2 39 0 882 118 31 9 chr5 28423389 28423618 -171206532 + GA-rich Low_complexity Low_complexity 1 233 0 22 0 0 0 chr5 28423983 28424005 -171206145 + AT_rich Low_complexity Low_complexity 1 22 0 581 213 7 29 chr5 28424780 28424916 -171205234 - AluJo SINE Alu -114 198 66 318 312 145 17 chr5 28425038 28425198 -171204952 - L1ME3A LINE L1 -274 5896 5695 1436 206 21 14 chr5 28425198 28425489 -171204661 - AluJo SINE Alu -19 293 1 318 312 145 17 chr5 28425489 28425562 -171204588 - L1ME3A LINE L1 -475 5695 5633 341 121 84 108 chr5 28426409 28426492 -171203658 - MER51D LTR ERV1 -77 580 500 689 268 69 90 chr5 28427239 28427524 -171202626 + L1MC4a LINE L1 6616 6906 -1055 2075 131 0 20 chr5 28427524 28427830 -171202320 + AluSg SINE Alu 1 300 -10 689 268 69 90 chr5 28427830 28428175 -171201975 + L1MC4a LINE L1 6906 7238 -723 512 287 84 43 chr5 28428318 28428712 -171201438 + L1MC5 LINE L1 7277 7686 -275 180 301 75 32 chr5 28429662 28429755 -171200395 + L2 LINE L2 3203 3299 -14 304 169 15 0 chr5 28430389 28430454 -171199696 - MER116 DNA Mariner -1 79 14 26 74 0 0 chr5 28430981 28431035 -171199115 + AT_rich Low_complexity Low_complexity 1 54 0 27 0 0 0 chr5 28431290 28431317 -171198833 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr5 28431941 28431966 -171198184 + AT_rich Low_complexity Low_complexity 1 25 0 300 286 86 51 chr5 28432356 28432590 -171197560 - HAL1 LINE L1 -1 2506 2265 1397 143 0 9 chr5 28432741 28432951 -171197199 - AluSx SINE Alu -66 246 39 1819 142 0 11 chr5 28433680 28433954 -171196196 + AluSx SINE Alu 1 271 -41 205 167 42 0 chr5 28433962 28434010 -171196140 + T-rich Low_complexity Low_complexity 2 51 0 1252 176 51 62 chr5 28434733 28435112 -171195038 - MER67C LTR ERV1 -242 272 1 3119 227 68 58 chr5 28435365 28435737 -171194413 - L1MD1 LINE L1 0 6636 6269 2272 97 0 13 chr5 28435737 28436048 -171194102 - AluSc SINE Alu -2 307 1 3119 227 68 58 chr5 28436048 28437339 -171192811 - L1MD1 LINE L1 -367 6269 4946 1789 177 36 33 chr5 28437348 28437401 -171192749 + MLT1B LTR MaLR 1 52 -338 2393 107 19 16 chr5 28437401 28437764 -171192386 + THE1B LTR MaLR 1 364 0 1789 177 36 33 chr5 28437764 28438099 -171192051 + MLT1B LTR MaLR 52 390 0 3553 255 90 57 chr5 28438104 28438549 -171191601 - L1MD1 LINE L1 -1607 4933 4504 654 12 0 24 chr5 28438549 28438633 -171191517 + L1PA6 LINE L1 6070 6151 -3 3553 255 90 57 chr5 28438633 28439154 -171190996 - L1MD1 LINE L1 -2036 4504 4002 1956 100 3 91 chr5 28439154 28439483 -171190667 + AluSp SINE Alu 4 303 -10 3553 255 90 57 chr5 28439483 28439944 -171190206 - L1MD1 LINE L1 -2538 4002 3558 881 166 39 34 chr5 28439944 28440149 -171190001 - L1MA3 LINE L1 -2 6303 6098 3553 255 90 57 chr5 28440149 28441250 -171188900 - L1MD1 LINE L1 -2982 3558 2326 291 154 40 20 chr5 28441251 28441400 -171188750 + (TA)n Simple_repeat Simple_repeat 1 152 0 201 126 28 70 chr5 28441378 28441521 -171188629 + (TTATA)n Simple_repeat Simple_repeat 3 139 0 * 27 92 0 0 chr5 28441522 28441598 -171188552 + AT_rich Low_complexity Low_complexity 1 76 0 244 162 40 75 chr5 28441599 28441772 -171188378 + (TATAA)n Simple_repeat Simple_repeat 3 169 0 312 222 27 54 chr5 28441972 28442157 -171187993 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 808 230 86 3 chr5 28442157 28442461 -171187689 - L1MD1 LINE L1 -4203 2337 2009 24 77 0 0 chr5 28442694 28442746 -171187404 + AT_rich Low_complexity Low_complexity 1 52 0 501 378 95 17 chr5 28442836 28443257 -171186893 + L2 LINE L2 2225 2678 -636 183 42 0 0 chr5 28443346 28443370 -171186780 + (TC)n Simple_repeat Simple_repeat 2 25 0 642 283 147 12 chr5 28443383 28443797 -171186353 - MER69 DNA AcHobo -19 2507 2038 * 767 324 54 4 chr5 28443795 28444073 -171186077 - MER69 DNA AcHobo -584 642 351 1181 238 5 68 chr5 28444952 28445322 -171184828 + MLT2C1 LTR ERVL 3 349 -48 210 203 0 51 chr5 28445322 28445381 -171184769 + (TCTCTG)n Simple_repeat Simple_repeat 4 59 0 1045 270 109 55 chr5 28445445 28446067 -171184083 - L1MC4 LINE L1 -143 7899 7244 689 222 30 15 chr5 28446071 28446269 -171183881 - L1MC4 LINE L1 -952 7090 6890 686 214 12 18 chr5 28446372 28446540 -171183610 - L1MB8 LINE L1 -6 6172 6006 230 164 0 49 chr5 28446547 28446608 -171183542 - L1MB8 LINE L1 -506 5668 5611 1209 194 24 10 chr5 28446631 28446919 -171183231 + L1MB8 LINE L1 5611 5902 -276 1679 161 37 7 chr5 28446920 28447338 -171182812 + L1M2 LINE L1 5148 5574 -717 6614 65 1 1 chr5 28447384 28448873 -171181277 - L1PA5 LINE L1 0 6154 4690 1659 70 0 0 chr5 28448873 28449088 -171181062 + L1PA5 LINE L1 4445 4659 -1487 469 302 37 55 chr5 28449263 28449652 -171180498 + ERVL LTR ERVL 1940 2365 -2864 302 326 36 7 chr5 28449906 28450044 -171180106 + ERVL LTR ERVL 2692 2833 -2163 350 380 62 7 chr5 28450207 28450657 -171179493 + ERVL LTR ERVL 3068 3542 -2112 262 267 50 0 chr5 28451552 28451653 -171178497 - HAL1b LINE L1 -257 1091 986 1221 131 0 6 chr5 28451773 28451949 -171178201 - AluSg/x SINE Alu -49 261 87 370 116 43 43 chr5 28451950 28452019 -171178131 + AluS SINE Alu 9 77 -226 796 59 37 15 chr5 28452084 28452220 -171177930 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 631 301 86 46 chr5 28452359 28452857 -171177293 - HAL1b LINE L1 -741 607 90 1841 135 0 0 chr5 28453258 28453583 -171176567 + AluSx SINE Alu 3 327 0 190 54 27 27 chr5 28453583 28453620 -171176530 + (TA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr5 28454987 28455008 -171175142 + AT_rich Low_complexity Low_complexity 1 21 0 2131 86 0 0 chr5 28456213 28456520 -171173630 + AluY SINE Alu 1 281 -30 2219 229 10 22 chr5 28456703 28457209 -171172941 - LTR31 LTR ERV1 -16 603 104 23 33 0 0 chr5 28457615 28457645 -171172505 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr5 28458066 28458099 -171172051 + AT_rich Low_complexity Low_complexity 1 33 0 842 234 12 6 chr5 28458208 28458379 -171171771 + MER45A DNA AcHobo 7 178 0 1384 208 0 41 chr5 28459421 28459750 -171170400 + AluJo SINE Alu 1 317 0 340 354 67 67 chr5 28460009 28460532 -171169618 + L2 LINE L2 2452 2974 -340 1329 137 19 5 chr5 28461092 28461297 -171168853 - AluSg/x SINE Alu -14 298 91 769 176 0 8 chr5 28461311 28461442 -171168708 - FLAM_C SINE Alu -3 130 1 710 191 66 0 chr5 28461929 28462081 -171168069 - MLT1A1 LTR MaLR 0 365 204 1195 159 0 0 chr5 28462213 28462395 -171167755 - AluSg/x SINE Alu -13 299 118 866 200 34 11 chr5 28462427 28462602 -171167548 - MLT1A1 LTR MaLR -183 182 4 1921 163 0 7 chr5 28462804 28463110 -171167040 - AluSx SINE Alu -8 304 1 815 278 163 47 chr5 28463433 28463980 -171166170 - MLT1E2 LTR MaLR 0 654 5 227 306 25 25 chr5 28464608 28464729 -171165421 - MLT1J LTR MaLR -161 350 230 2507 266 45 44 chr5 28466546 28467627 -171162523 + L1MEc LINE L1 1973 3051 -3164 2116 112 10 3 chr5 28467627 28467932 -171162218 + AluSx SINE Alu 1 307 -5 2507 266 45 44 chr5 28467932 28468243 -171161907 + L1MEc LINE L1 3051 3317 -2898 2256 145 67 12 chr5 28468243 28468649 -171161501 + MSTA LTR MaLR 1 428 0 2507 266 45 44 chr5 28468649 28468665 -171161485 + L1MEc LINE L1 3317 3331 -2884 345 296 45 126 chr5 28468885 28469392 -171160758 + L1MC4 LINE L1 7545 8010 -32 785 289 101 50 chr5 28470216 28470673 -171159477 + MLT1F1 LTR MaLR 80 559 -8 23 54 0 0 chr5 28471450 28471487 -171158663 + AT_rich Low_complexity Low_complexity 1 37 0 206 255 0 0 chr5 28471777 28471828 -171158322 + (TTA)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr5 28473581 28473602 -171156548 + AT_rich Low_complexity Low_complexity 1 21 0 6552 99 62 12 chr5 28473639 28473975 -171156175 - L1PA8A LINE L1 -314 5817 5499 2139 114 0 3 chr5 28473975 28474273 -171155877 - AluSg1 SINE Alu -12 297 1 6552 99 62 12 chr5 28474273 28475465 -171154685 - L1PA8A LINE L1 -632 5499 4206 304 163 0 0 chr5 28475465 28475514 -171154636 + MLT1B LTR MaLR 336 384 -6 592 271 68 51 chr5 28475522 28475814 -171154336 + MLT2C1 LTR ERVL 1 297 -100 309 89 0 0 chr5 28475820 28475865 -171154285 + (TC)n Simple_repeat Simple_repeat 2 46 0 363 152 0 0 chr5 28475866 28475945 -171154205 + (CA)n Simple_repeat Simple_repeat 1 79 0 693 208 59 25 chr5 28475999 28476201 -171153949 - L1MD3 LINE L1 0 7995 7787 904 239 77 68 chr5 28476231 28476728 -171153422 - MLT1D LTR MaLR -4 501 1 21 36 0 0 chr5 28477187 28477215 -171152935 + AT_rich Low_complexity Low_complexity 1 28 0 621 136 58 12 chr5 28477927 28478170 -171151980 + CT-rich Low_complexity Low_complexity 1 254 0 2213 100 7 0 chr5 28478646 28478936 -171151214 + AluSc SINE Alu 1 292 -17 22 56 0 0 chr5 28480032 28480068 -171150082 + AT_rich Low_complexity Low_complexity 1 36 0 1247 219 64 3 chr5 28480389 28480672 -171149478 - AluJo SINE Alu -2 300 1 22 56 0 0 chr5 28480794 28480830 -171149320 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr5 28481305 28481333 -171148817 + AT_rich Low_complexity Low_complexity 1 28 0 445 285 6 0 chr5 28481608 28481727 -171148423 + MIR SINE MIR 39 161 -47 234 300 167 24 chr5 28482271 28482481 -171147669 - L1M4 LINE L1 -1224 4922 4683 277 122 0 0 chr5 28482571 28482612 -171147538 + U2 snRNA snRNA 1 41 -147 2097 153 34 39 chr5 28482636 28483075 -171147075 + LTR56 LTR ERV1 9 445 0 1001 259 60 34 chr5 28483097 28483500 -171146650 - L1M4 LINE L1 -1627 4519 4101 1492 212 76 27 chr5 28483500 28483910 -171146240 + MER57B LTR ERV1 5 434 0 1001 259 60 34 chr5 28483910 28483954 -171146196 - L1M4 LINE L1 -2045 4101 4060 4724 92 36 0 chr5 28487078 28487775 -171142375 + LTR30 LTR ERV1 1 722 0 729 325 90 36 chr5 28488034 28488567 -171141583 + ERVL LTR ERVL 2669 3230 -2534 220 317 19 29 chr5 28489162 28489266 -171140884 + L2 LINE L2 2145 2247 -1067 * 233 376 24 57 chr5 28489256 28489588 -171140562 - L2 LINE L2 -1191 2123 1803 187 393 36 0 chr5 28490695 28490807 -171139343 + L2 LINE L2 1896 2011 -1303 191 278 0 0 chr5 28490944 28490980 -171139170 + L2 LINE L2 3267 3302 -11 347 304 84 31 chr5 28491031 28491258 -171138892 + L2 LINE L2 3075 3313 0 1988 123 13 13 chr5 28492086 28492396 -171137754 + AluSx SINE Alu 1 310 -2 231 274 157 32 chr5 28492725 28492973 -171137177 + HAL1b LINE L1 95 373 -975 983 274 87 19 chr5 28493035 28493404 -171136746 - L1ME3A LINE L1 -328 5842 5449 274 333 56 5 chr5 28493468 28493681 -171136469 + L1M4 LINE L1 5164 5387 -759 23 0 0 0 chr5 28493842 28493865 -171136285 + AT_rich Low_complexity Low_complexity 1 23 0 2318 121 0 50 chr5 28493865 28494075 -171136075 - L1MA2 LINE L1 -7 6297 6078 2372 55 0 0 chr5 28494075 28494364 -171135786 - AluY SINE Alu -17 294 6 207 0 0 0 chr5 28494368 28494391 -171135759 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1871 98 8 0 chr5 28494394 28494639 -171135511 - AluSc SINE Alu -32 277 31 2318 121 0 50 chr5 28494639 28494823 -171135327 - L1MA2 LINE L1 -231 6073 5914 237 315 68 93 chr5 28494825 28495149 -171135001 - L1MEd LINE L1 -5596 523 208 39 50 0 0 chr5 28497323 28497383 -171132767 + AT_rich Low_complexity Low_complexity 1 60 0 237 320 54 54 chr5 28499070 28499217 -171130933 + MER5A DNA MER1_type 36 182 -7 2261 97 0 0 chr5 28500421 28500720 -171129430 - AluY SINE Alu -12 299 1 1785 170 75 154 chr5 28501583 28502373 -171127777 + LTR8A LTR ERV1 1 727 0 189 0 0 0 chr5 28503489 28503510 -171126640 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2198 82 7 0 chr5 28503510 28503790 -171126360 - AluY SINE Alu -29 282 1 890 287 37 6 chr5 28505305 28505653 -171124497 + L1M4 LINE L1 3703 4061 -2085 2653 236 85 6 chr5 28505675 28506819 -171123331 + L1M4 LINE L1 4384 5618 -566 1156 206 61 8 chr5 28506819 28507081 -171123069 + MLT1A1 LTR MaLR 1 276 -89 1075 36 0 29 chr5 28507084 28507224 -171122926 + L1PA10 LINE L1 6031 6166 -2 997 201 16 39 chr5 28507375 28507629 -171122521 + L1PA16 LINE L1 4481 4728 -1418 3990 179 16 30 chr5 28507632 28508462 -171121688 + L1PA16 LINE L1 5312 6129 -37 275 216 46 26 chr5 28508462 28508615 -171121535 + (TTATA)n Simple_repeat Simple_repeat 4 159 0 * 391 209 45 40 chr5 28508599 28508776 -171121374 + (TA)n Simple_repeat Simple_repeat 2 179 0 421 186 36 25 chr5 28508805 28509132 -171121018 + (TA)n Simple_repeat Simple_repeat 1 330 0 24 85 0 0 chr5 28509186 28509245 -171120905 + AT_rich Low_complexity Low_complexity 1 59 0 356 209 33 44 chr5 28509245 28509498 -171120652 + (TA)n Simple_repeat Simple_repeat 1 250 0 244 198 31 62 chr5 28509478 28509640 -171120510 + (TTATA)n Simple_repeat Simple_repeat 5 161 0 * 324 192 45 13 chr5 28509673 28509829 -171120321 + (TA)n Simple_repeat Simple_repeat 1 161 0 23 86 0 0 chr5 28509935 28509993 -171120157 + AT_rich Low_complexity Low_complexity 1 58 0 389 276 248 5 chr5 28510126 28510336 -171119814 - MLT1E1 LTR MaLR -391 263 3 225 218 92 23 chr5 28510498 28510585 -171119565 - L1ME3A LINE L1 -134 6036 5944 973 176 22 39 chr5 28510889 28511071 -171119079 + MER30 DNA MER1_type 52 230 0 629 245 65 43 chr5 28511071 28511341 -171118809 + MER52A LTR ERV1 1 380 -1375 24 91 0 0 chr5 28511395 28511461 -171118689 + AT_rich Low_complexity Low_complexity 1 66 0 429 36 0 0 chr5 28511737 28511792 -171118358 + (TG)n Simple_repeat Simple_repeat 2 56 0 1902 138 16 13 chr5 28512119 28512430 -171117720 + AluSq SINE Alu 1 312 -1 22 0 0 0 chr5 28513439 28513461 -171116689 + AT_rich Low_complexity Low_complexity 1 22 0 307 282 12 0 chr5 28514429 28514514 -171115636 + MIR SINE MIR 83 168 -94 23 54 0 0 chr5 28514577 28514614 -171115536 + AT_rich Low_complexity Low_complexity 1 37 0 548 226 8 8 chr5 28514802 28514935 -171115215 - MLT1A1 LTR MaLR 0 365 233 256 132 0 179 chr5 28514963 28515069 -171115081 + LTR38B LTR ERV1 27 113 -497 967 215 137 41 chr5 28515160 28515596 -171114554 + LTR38B LTR ERV1 92 556 0 867 220 49 31 chr5 28515596 28515819 -171114331 - MLT1A1 LTR MaLR -129 236 10 2505 310 21 18 chr5 28516420 28517350 -171112800 - ERVL LTR ERVL -2350 3414 2482 28 0 0 0 chr5 28517357 28517385 -171112765 + AT_rich Low_complexity Low_complexity 1 28 0 3620 60 0 11 chr5 28517395 28517861 -171112289 - L1PA7 LINE L1 -11 6143 5683 460 119 0 0 chr5 28517861 28517928 -171112222 + L1PA7 LINE L1 5631 5697 -457 1829 327 41 6 chr5 28517956 28518835 -171111315 - ERVL LTR ERVL -3238 2438 1477 493 314 29 5 chr5 28519005 28519212 -171110938 - ERVL LTR ERVL -4448 1316 1105 322 368 14 0 chr5 28519744 28519888 -171110262 - ERVL LTR ERVL -5154 610 465 423 295 20 13 chr5 28520065 28520214 -171109936 - MLT2F LTR ERVL -513 150 1 306 294 28 55 chr5 28520316 28520425 -171109725 - L1M4 LINE L1 -2688 3458 3353 648 251 43 21 chr5 28520442 28520629 -171109521 + MER20 DNA MER1_type 29 219 0 186 43 0 0 chr5 28521127 28521150 -171109000 + (A)n Simple_repeat Simple_repeat 1 23 0 70 92 0 0 chr5 28521252 28521448 -171108702 + AT_rich Low_complexity Low_complexity 1 196 0 186 422 37 18 chr5 28521509 28521618 -171108532 - MER5A DNA MER1_type 0 189 79 247 335 64 37 chr5 28521886 28522074 -171108076 - MLT1I LTR MaLR -17 392 200 23 0 0 0 chr5 28523490 28523513 -171106637 + AT_rich Low_complexity Low_complexity 1 23 0 48 0 0 0 chr5 28523530 28523578 -171106572 + AT_rich Low_complexity Low_complexity 1 48 0 1735 154 159 16 chr5 28524393 28524757 -171105393 - MSTA LTR MaLR -12 416 1 1714 86 0 21 chr5 28525159 28525393 -171104757 - AluSp SINE Alu -2 311 83 23 33 0 0 chr5 28525750 28525780 -171104370 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 28526478 28526500 -171103650 + AT_rich Low_complexity Low_complexity 1 22 0 223 300 0 109 chr5 28527156 28527230 -171102920 - L2 LINE L2 -19 3253 3193 1969 159 0 7 chr5 28527230 28527532 -171102618 + AluSx SINE Alu 1 300 -12 223 300 0 109 chr5 28527532 28527567 -171102583 - L2 LINE L2 -79 3193 3156 11370 218 25 20 chr5 28528400 28534330 -171095820 - L1PA16 LINE L1 0 6869 899 21 0 0 0 chr5 28534636 28534657 -171095493 + AT_rich Low_complexity Low_complexity 1 21 0 1974 130 9 13 chr5 28535425 28535740 -171094410 + L1PB4 LINE L1 5830 6143 -13 247 314 58 22 chr5 28535746 28535883 -171094267 + MIR SINE MIR 57 198 -64 940 294 95 24 chr5 28536793 28537851 -171092299 - L1ME3 LINE L1 -50 6112 4921 21 0 0 0 chr5 28537955 28537976 -171092174 + AT_rich Low_complexity Low_complexity 1 21 0 1619 214 58 16 chr5 28538435 28538800 -171091350 + MLT1B LTR MaLR 1 380 -10 245 256 47 12 chr5 28540447 28540533 -171089617 - MLT1I LTR MaLR -17 392 304 29 28 0 0 chr5 28540907 28540943 -171089207 + AT_rich Low_complexity Low_complexity 1 36 0 868 249 40 20 chr5 28541200 28541449 -171088701 + MLT1E1 LTR MaLR 6 259 -395 690 285 34 28 chr5 28541910 28542264 -171087886 - L1ME3 LINE L1 -2197 3949 3594 216 0 0 0 chr5 28542594 28542618 -171087532 + (TA)n Simple_repeat Simple_repeat 2 25 0 318 26 0 0 chr5 28542645 28542684 -171087466 + (CA)n Simple_repeat Simple_repeat 2 40 0 729 191 50 0 chr5 28542707 28542848 -171087302 + Tigger2 DNA MER2_type 4 151 -2567 4074 149 3 46 chr5 28542858 28543601 -171086549 + Tigger2 DNA MER2_type 330 1040 -1678 2004 113 3 0 chr5 28543601 28543909 -171086241 - AluSp SINE Alu 0 309 1 3981 158 72 3 chr5 28543927 28544634 -171085516 + Tigger2 DNA MER2_type 1963 2718 0 309 198 0 0 chr5 28544634 28544720 -171085430 + (TA)n Simple_repeat Simple_repeat 1 86 0 226 303 0 0 chr5 28544733 28544822 -171085328 - L1MC4 LINE L1 -1339 6703 6615 801 195 11 63 chr5 28544936 28545126 -171085024 - MLT2B1 LTR ERVL -264 256 77 773 224 0 0 chr5 28545149 28545292 -171084858 - ERVL LTR ERVL -1022 4742 4600 1433 224 53 28 chr5 28545302 28545663 -171084487 - MLT1A2 LTR MaLR 0 374 5 1467 204 3 19 chr5 28545725 28546039 -171084111 - AluJo SINE Alu -3 309 1 21 36 0 0 chr5 28546076 28546104 -171084046 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr5 28546475 28546507 -171083643 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr5 28546901 28546922 -171083228 + AT_rich Low_complexity Low_complexity 1 21 0 1954 137 0 4 chr5 28547109 28547447 -171082703 - AluSg SINE Alu 0 341 5 1934 165 0 0 chr5 28547450 28547747 -171082403 - AluSx SINE Alu -15 297 1 485 221 12 86 chr5 28547828 28547991 -171082159 + LTR52 LTR ERVL 1 151 -270 236 127 91 18 chr5 28547992 28548047 -171082103 + L1M4 LINE L1 3651 3709 -2437 1852 148 80 14 chr5 28548050 28548402 -171081748 + THE1C LTR MaLR 1 375 0 1977 148 51 24 chr5 28548405 28548737 -171081413 - THE1B LTR MaLR -8 356 16 11191 112 3 0 chr5 28548744 28550319 -171079831 - THE1B-int LTR MaLR 0 1580 1 1945 138 63 20 chr5 28550319 28550666 -171079484 - THE1B LTR MaLR 0 364 3 5897 182 26 94 chr5 28550674 28552301 -171077849 + L1M2 LINE L1 3708 5164 -1127 263 71 24 0 chr5 28552301 28552343 -171077807 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 5897 182 26 94 chr5 28552343 28552723 -171077427 + L1M2 LINE L1 5164 5568 -723 2494 57 3 0 chr5 28552724 28553042 -171077108 + L1P LINE L1 3455 3773 -2373 208 221 0 44 chr5 28654902 28654970 -170975180 + (TATG)n Simple_repeat Simple_repeat 4 68 0 235 138 35 17 chr5 28655084 28655142 -170975008 + (TA)n Simple_repeat Simple_repeat 1 59 0 273 59 0 0 chr5 28655201 28655235 -170974915 - U2 snRNA snRNA -154 34 1 1908 99 24 24 chr5 28655406 28655700 -170974450 + AluSx SINE Alu 1 294 -18 185 91 0 30 chr5 28655749 28655782 -170974368 + (CGGGA)n Simple_repeat Simple_repeat 2 33 0 225 274 0 0 chr5 28656245 28656296 -170973854 + GA-rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr5 28656390 28656411 -170973739 + AT_rich Low_complexity Low_complexity 1 21 0 749 226 62 4 chr5 28656878 28657221 -170972929 - MLT1D LTR MaLR 0 505 115 327 137 0 0 chr5 28657223 28657274 -170972876 - MADE1 DNA Mariner 0 80 30 280 288 0 0 chr5 28657302 28657368 -170972782 - MLT1D LTR MaLR -439 66 1 4992 201 51 59 chr5 28657404 28659107 -170971043 + L1MC1 LINE L1 4634 6324 -9 285 242 11 55 chr5 28659167 28659258 -170970892 - Tigger5 DNA MER2_type 0 2323 2237 1568 267 29 27 chr5 28659409 28659889 -170970261 - LTR38 LTR ERV1 -11 545 65 375 376 12 32 chr5 28660370 28660620 -170969530 - LTR38-int LTR ERV1 -257 6865 6621 258 196 59 0 chr5 28660614 28660665 -170969485 - PABL_B-int LTR ERV1 -5090 2032 1979 * 469 284 84 47 chr5 28660772 28661131 -170969019 + LTR15 LTR ERV1 104 475 -18 1566 180 40 42 chr5 28661141 28661815 -170968335 - MER49 LTR ERV1 -212 711 1 578 132 5 36 chr5 28661819 28662006 -170968144 - LTR38-int LTR ERV1 -1023 7097 6829 681 237 43 0 chr5 28662024 28662163 -170967987 - LTR38-int LTR ERV1 -608 6150 6006 288 184 78 136 chr5 28662473 28662576 -170967574 - LTR38-int LTR ERV1 -4240 3880 3784 740 201 146 18 chr5 28662773 28663148 -170967002 - LTR38-int LTR ERV1 -4513 2245 1663 2022 100 0 0 chr5 28663152 28663411 -170966739 - AluSc SINE Alu -20 289 31 5802 187 50 33 chr5 28663411 28663838 -170966312 - LTR38-int LTR ERV1 -7 1779 1361 3307 53 2 0 chr5 28663838 28664249 -170965901 + L1PA5 LINE L1 5740 6151 -3 5802 187 50 33 chr5 28664249 28665311 -170964839 - LTR38-int LTR ERV1 -425 1361 284 551 140 119 0 chr5 28665521 28665664 -170964486 - AluYa8 SINE Alu -150 160 1 325 323 128 5 chr5 28665779 28665974 -170964176 - MLT1J LTR MaLR -2 509 291 40 59 0 0 chr5 28666149 28666217 -170963933 + AT_rich Low_complexity Low_complexity 1 68 0 182 37 37 0 chr5 28666606 28666633 -170963517 + (TC)n Simple_repeat Simple_repeat 1 28 0 342 115 0 0 chr5 28666836 28666888 -170963262 + (TG)n Simple_repeat Simple_repeat 1 52 0 2209 148 11 0 chr5 28667066 28667443 -170962707 - L1PA13 LINE L1 0 6163 5783 856 251 103 14 chr5 28668336 28668627 -170961523 + L1ME LINE L1 4034 4350 -1796 1434 247 106 39 chr5 28668675 28669421 -170960729 + L1ME LINE L1 4931 5720 -446 1600 189 0 11 chr5 28669427 28669708 -170960442 - AluJb SINE Alu -34 278 1 839 55 0 0 chr5 28669999 28670108 -170960042 - L1PA4 LINE L1 0 6155 6047 479 17 17 0 chr5 28670867 28670927 -170959223 + (CA)n Simple_repeat Simple_repeat 1 61 0 1193 284 113 21 chr5 28671158 28671768 -170958382 - L2 LINE L2 -499 2815 2150 25 75 0 0 chr5 28671891 28671944 -170958206 + AT_rich Low_complexity Low_complexity 1 53 0 192 344 169 31 chr5 28672030 28672190 -170957960 - MIR3 SINE MIR -15 193 12 22 70 0 0 chr5 28672476 28672519 -170957631 + AT_rich Low_complexity Low_complexity 1 43 0 459 0 0 0 chr5 28673042 28673093 -170957057 + (CA)n Simple_repeat Simple_repeat 2 52 0 1539 198 0 3 chr5 28673201 28673484 -170956666 + AluJb SINE Alu 1 282 -30 338 214 12 24 chr5 28673551 28673635 -170956515 - L1MB1 LINE L1 -55 6134 6052 * 906 115 33 123 chr5 28673630 28673874 -170956276 + L1MA10 LINE L1 6111 6332 -2 21 0 0 0 chr5 28674255 28674276 -170955874 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 28675091 28675121 -170955029 + AT_rich Low_complexity Low_complexity 1 30 0 426 136 25 74 chr5 28676852 28676933 -170953217 - LTR38-int LTR ERV1 -1708 78 2 1558 285 45 24 chr5 28676947 28677480 -170952670 - LTR38 LTR ERV1 -12 544 1 315 253 40 53 chr5 28677539 28677689 -170952461 - L1M4 LINE L1 -3096 3050 2903 368 323 154 18 chr5 28677803 28678140 -170952010 + L1M4 LINE L1 4683 5065 -1081 2226 77 40 7 chr5 28680395 28680695 -170949455 + AluY SINE Alu 1 310 -1 6265 126 23 29 chr5 28681090 28682167 -170947983 - MER11C LTR ERVK 0 1071 1 355 242 42 0 chr5 28682266 28682361 -170947789 - L1MA10 LINE L1 -11 6323 6225 2428 63 0 0 chr5 28682610 28682909 -170947241 + AluY SINE Alu 1 299 -12 301 334 52 83 chr5 28682977 28683384 -170946766 - L1MB1 LINE L1 -2005 5803 5410 393 353 56 24 chr5 28683448 28683697 -170946453 + L2 LINE L2 3056 3312 -1 23 78 0 0 chr5 28686015 28686066 -170944084 + AT_rich Low_complexity Low_complexity 1 51 0 283 286 20 0 chr5 28686677 28686819 -170943331 + (TA)n Simple_repeat Simple_repeat 1 144 0 22 0 0 0 chr5 28688293 28688315 -170941835 + AT_rich Low_complexity Low_complexity 1 22 0 2400 36 0 0 chr5 28688887 28689204 -170940946 - AluY SINE Alu 0 317 1 24 0 0 0 chr5 28689400 28689424 -170940726 + AT_rich Low_complexity Low_complexity 1 24 0 445 284 119 37 chr5 28689571 28689898 -170940252 - L1MDa LINE L1 -2792 3423 3070 1505 210 35 35 chr5 28689899 28690270 -170939880 + MLT1A2 LTR MaLR 4 374 0 351 263 45 8 chr5 28690299 28690432 -170939718 - L1MDa LINE L1 -3147 3068 2931 277 336 105 0 chr5 28690582 28690811 -170939339 - L1MDa LINE L1 -3783 2432 2180 2324 66 10 7 chr5 28690940 28691241 -170938909 + AluY SINE Alu 1 302 -9 301 300 67 45 chr5 28691552 28692146 -170938004 - L1MDa LINE L1 -4571 1644 1072 21 0 0 0 chr5 28693621 28693642 -170936508 + AT_rich Low_complexity Low_complexity 1 21 0 2175 56 11 3 chr5 28693648 28693933 -170936217 + AluY SINE Alu 1 287 -24 564 29 0 0 chr5 28693936 28694006 -170936144 + (TAAAA)n Simple_repeat Simple_repeat 2 71 0 2323 38 14 3 chr5 28694343 28694634 -170935516 + AluY SINE Alu 1 294 -17 255 331 76 7 chr5 28695001 28695146 -170935004 - MER67D LTR ERV1 -4 510 356 1239 211 70 29 chr5 28695153 28695465 -170934685 - MER67C LTR ERV1 -307 403 79 927 245 7 114 chr5 28695481 28695894 -170934256 + MLT2B1 LTR ERVL 99 467 -53 24 96 0 0 chr5 28696192 28696265 -170933885 + AT_rich Low_complexity Low_complexity 1 73 0 189 147 0 0 chr5 28696581 28696615 -170933535 + (CA)n Simple_repeat Simple_repeat 2 35 0 350 267 23 12 chr5 28697248 28697420 -170932730 + (TA)n Simple_repeat Simple_repeat 2 175 0 1782 188 53 8 chr5 28697427 28697784 -170932366 - MLT2D LTR ERVL -40 374 2 968 232 42 83 chr5 28698157 28698952 -170931198 - MER4C LTR ERV1 0 471 1 40 0 0 0 chr5 28699011 28699051 -170931099 + AT_rich Low_complexity Low_complexity 1 40 0 1109 192 0 33 chr5 28700108 28700348 -170929802 - AluJb SINE Alu -3 309 78 223 184 20 51 chr5 28700593 28700691 -170929459 + (TA)n Simple_repeat Simple_repeat 2 96 0 24 32 0 0 chr5 28701402 28701433 -170928717 + AT_rich Low_complexity Low_complexity 1 31 0 192 97 0 0 chr5 28701544 28701575 -170928575 + (TG)n Simple_repeat Simple_repeat 2 32 0 811 191 0 0 chr5 28702682 28702829 -170927321 - L1MA6 LINE L1 -1199 4947 4801 2317 177 26 71 chr5 28702830 28702981 -170927169 + L1MA6 LINE L1 4955 5111 -1189 2291 121 0 3 chr5 28702981 28703294 -170926856 - AluSx SINE Alu 0 312 1 2317 177 26 71 chr5 28703294 28704065 -170926085 + L1MA6 LINE L1 5111 5836 -464 5065 177 34 17 chr5 28704090 28705180 -170924970 + L1MA6 LINE L1 5190 6299 -1 425 318 87 0 chr5 28705204 28705377 -170924773 - LTR16A1 LTR ERVL -69 388 201 391 234 88 58 chr5 28705836 28706041 -170924109 + L2 LINE L2 2311 2521 -793 23 78 0 0 chr5 28707811 28707862 -170922288 + AT_rich Low_complexity Low_complexity 1 51 0 34 24 0 0 chr5 28708040 28708081 -170922069 + AT_rich Low_complexity Low_complexity 1 41 0 1498 194 33 14 chr5 28709109 28709474 -170920676 + L1MA6 LINE L1 5918 6289 -11 312 27 0 0 chr5 28709996 28710033 -170920117 + (TG)n Simple_repeat Simple_repeat 1 37 0 813 200 14 81 chr5 28710045 28710255 -170919895 - AluJo SINE Alu -30 282 87 696 86 29 9 chr5 28710400 28710505 -170919645 - L1P4 LINE L1 -523 5645 5539 2457 102 43 0 chr5 28710505 28710863 -170919287 + L1PA10 LINE L1 5779 6168 0 1349 57 6 0 chr5 28711292 28711468 -170918682 - L1PA4 LINE L1 -8 6147 5971 21 57 0 0 chr5 28711964 28711999 -170918151 + AT_rich Low_complexity Low_complexity 1 35 0 241 94 113 19 chr5 28712255 28712308 -170917842 - MLT1I LTR MaLR -26 383 326 1960 144 0 3 chr5 28714238 28714550 -170915600 + AluSq SINE Alu 1 311 0 263 276 28 62 chr5 28714807 28714952 -170915198 + L2 LINE L2 2219 2358 -956 1577 319 70 26 chr5 28715093 28715854 -170914296 + L2 LINE L2 1536 2329 -985 21 0 0 0 chr5 28716018 28716039 -170914111 + AT_rich Low_complexity Low_complexity 1 21 0 27 81 0 0 chr5 28716070 28716132 -170914018 + AT_rich Low_complexity Low_complexity 1 62 0 295 356 23 3 chr5 28716396 28716506 -170913644 - MIR SINE MIR -66 142 30 367 281 56 56 chr5 28716658 28716836 -170913314 + MLT1J LTR MaLR 3 180 -331 647 218 81 6 chr5 28716849 28717022 -170913128 - MSTD LTR MaLR -2 383 175 1469 313 56 25 chr5 28717148 28717832 -170912318 - L2 LINE L2 -976 2338 1634 501 245 83 62 chr5 28718085 28718277 -170911873 - MSTD LTR MaLR -169 196 1 430 321 14 69 chr5 28718282 28718559 -170911591 + MLT1J LTR MaLR 191 452 -59 1903 184 52 33 chr5 28718620 28719161 -170910989 + MLT2A2 LTR ERVL 4 554 0 300 291 0 12 chr5 28720186 28720272 -170909878 - L2 LINE L2 -2 3311 3227 422 295 62 53 chr5 28720895 28721122 -170909028 - MIR SINE MIR 0 262 34 30 0 0 0 chr5 28721241 28721271 -170908879 + AT_rich Low_complexity Low_complexity 1 30 0 1211 114 0 0 chr5 28721419 28721603 -170908547 + L1MA4 LINE L1 6109 6292 -8 2235 193 73 5 chr5 28721770 28722361 -170907789 - L1P LINE L1 -777 5374 4735 4259 96 3 5 chr5 28722361 28722968 -170907182 + L1PB1 LINE L1 5545 6150 -1 26 0 0 0 chr5 28723207 28723233 -170906917 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr5 28723446 28723478 -170906672 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 28724133 28724156 -170905994 + AT_rich Low_complexity Low_complexity 1 23 0 2597 145 14 26 chr5 28724231 28724722 -170905428 - L1MA9 LINE L1 0 6312 5828 198 0 0 0 chr5 28724754 28724776 -170905374 + (TATATG)n Simple_repeat Simple_repeat 3 24 0 1593 175 25 62 chr5 28724786 28725187 -170904963 + L1 LINE L1 4972 5357 -789 1126 194 0 15 chr5 28726037 28726243 -170903907 + MSTA LTR MaLR 1 203 -225 1157 154 37 15 chr5 28726342 28726546 -170903604 + MSTA LTR MaLR 211 418 -10 337 289 22 0 chr5 28728976 28729066 -170901084 + MIR SINE MIR 76 167 -95 26 64 0 0 chr5 28729953 28730000 -170900150 + AT_rich Low_complexity Low_complexity 1 47 0 29 0 0 0 chr5 28732238 28732267 -170897883 + AT_rich Low_complexity Low_complexity 1 29 0 3161 105 29 25 chr5 28732267 28732780 -170897370 - L1MA1 LINE L1 -7 6295 5781 3746 77 8 6 chr5 28732799 28733320 -170896830 + L1MA1 LINE L1 5254 5775 -527 2173 108 0 0 chr5 28733811 28734097 -170896053 + AluSx SINE Alu 1 286 -26 2361 90 3 0 chr5 28737073 28737384 -170892766 - AluSp SINE Alu 0 313 2 251 107 0 71 chr5 28738049 28738105 -170892045 + L1MC4 LINE L1 6652 6703 -1339 416 182 0 20 chr5 28738110 28738209 -170891941 + (CATATA)n Simple_repeat Simple_repeat 3 99 0 2095 115 3 0 chr5 28738274 28738562 -170891588 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr5 28739640 28739670 -170890480 + AT_rich Low_complexity Low_complexity 1 30 0 3936 83 63 3 chr5 28740001 28740569 -170889581 - LTR14B LTR ERVK 0 608 7 379 314 16 43 chr5 28740670 28740858 -170889292 + MLT1I LTR MaLR 44 226 -183 207 0 0 0 chr5 28740978 28741001 -170889149 + (CA)n Simple_repeat Simple_repeat 2 24 0 204 40 0 0 chr5 28742178 28742203 -170887947 + (CA)n Simple_repeat Simple_repeat 2 26 0 1451 191 101 42 chr5 28742387 28742725 -170887425 + MSTB1 LTR MaLR 1 368 -64 1970 110 0 18 chr5 28742725 28743007 -170887143 - AluSc SINE Alu -32 277 1 1451 191 101 42 chr5 28743007 28743076 -170887074 + MSTB1 LTR MaLR 368 432 0 1775 171 0 31 chr5 28744202 28744524 -170885626 + AluJo SINE Alu 1 312 0 461 139 15 36 chr5 28744743 28744880 -170885270 + (TA)n Simple_repeat Simple_repeat 2 135 0 1048 310 115 39 chr5 28744972 28745629 -170884521 - L2 LINE L2 -272 3041 2340 4951 29 5 0 chr5 28746261 28746853 -170883297 - L1PA4 LINE L1 0 6155 5561 186 43 0 0 chr5 28746853 28746876 -170883274 + (CAGAA)n Simple_repeat Simple_repeat 3 25 0 1781 184 34 6 chr5 28746901 28747255 -170882895 - MLT1A1 LTR MaLR -1 364 1 969 323 187 28 chr5 28747255 28748149 -170882001 - L2 LINE L2 -1023 2291 1256 22638 31 4 0 chr5 28748159 28750907 -170879243 - L1P LINE L1 -1739 4407 1649 8839 32 0 0 chr5 28750909 28752736 -170877414 + L1PA3 LINE L1 4324 6150 -5 1471 191 87 48 chr5 28754577 28755104 -170875046 - MER67C LTR ERV1 0 514 1 518 280 0 32 chr5 28755104 28755288 -170874862 + MER3 DNA MER1_type 31 208 -1 256 182 57 0 chr5 28756320 28756408 -170873742 + GA-rich Low_complexity Low_complexity 2 94 0 556 367 31 8 chr5 28756550 28756806 -170873344 + MIR SINE MIR 1 262 0 238 302 66 97 chr5 28756946 28757204 -170872946 + L2 LINE L2 2228 2477 -837 24 53 0 0 chr5 28757874 28757912 -170872238 + AT_rich Low_complexity Low_complexity 1 38 0 29 84 0 0 chr5 28758186 28758257 -170871893 + AT_rich Low_complexity Low_complexity 1 71 0 337 316 68 11 chr5 28759403 28759580 -170870570 - MIR SINE MIR -35 227 41 1547 134 38 4 chr5 28759915 28760154 -170869996 - AluSg SINE Alu -22 288 42 235 302 47 0 chr5 28760321 28760427 -170869723 - L1ME LINE L1 -346 5824 5714 232 296 68 30 chr5 28760435 28760567 -170869583 - L1ME LINE L1 -534 5636 5500 2176 108 0 3 chr5 28760786 28761083 -170869067 + AluSq SINE Alu 1 296 -17 219 139 0 0 chr5 28761083 28761119 -170869031 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr5 28761101 28761122 -170869028 + AT_rich Low_complexity Low_complexity 1 21 0 * 413 149 0 23 chr5 28762091 28762178 -170867972 + (TCCCC)n Simple_repeat Simple_repeat 5 89 0 391 321 49 62 chr5 28762645 28762969 -170867181 + MLT1I LTR MaLR 85 404 -5 2467 63 0 0 chr5 28764429 28764729 -170865421 - AluY SINE Alu -11 300 1 369 345 65 49 chr5 28766154 28766479 -170863671 + L2 LINE L2 2643 2972 -342 21 0 0 0 chr5 28766818 28766839 -170863311 + AT_rich Low_complexity Low_complexity 1 21 0 284 156 44 0 chr5 28768123 28768213 -170861937 + (TA)n Simple_repeat Simple_repeat 1 94 0 1447 202 0 0 chr5 28768213 28768475 -170861675 - AluJb SINE Alu -27 285 24 1115 224 103 4 chr5 28769078 28769350 -170860800 - MLT1E2 LTR MaLR -9 617 319 2311 219 16 14 chr5 28769376 28769878 -170860272 - MER67D LTR ERV1 -2 512 10 543 210 152 5 chr5 28769896 28770106 -170860044 - MLT1E2 LTR MaLR -328 298 73 198 103 0 0 chr5 28771656 28771685 -170858465 + (TCCCC)n Simple_repeat Simple_repeat 3 31 0 833 132 24 6 chr5 28771707 28771874 -170858276 + CT-rich Low_complexity Low_complexity 3 172 0 877 77 33 39 chr5 28771890 28772071 -170858079 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 284 328 29 35 chr5 28772582 28772753 -170857397 - MLT1K LTR MaLR -2 586 417 395 191 76 38 chr5 28772757 28772862 -170857288 - FLAM_A SINE Alu -3 130 22 350 346 65 14 chr5 28772865 28773082 -170857068 - MLT1K LTR MaLR -162 426 199 1942 201 40 81 chr5 28773793 28774371 -170855779 + MLT2B3 LTR ERVL 1 554 0 219 69 0 0 chr5 28776043 28776072 -170854078 + (A)n Simple_repeat Simple_repeat 1 29 0 294 267 38 38 chr5 28776948 28777079 -170853071 + L1MC4 LINE L1 7891 8021 -21 237 291 43 35 chr5 28777692 28777747 -170852403 + HAL1b LINE L1 456 509 -839 2007 147 29 29 chr5 28777747 28778122 -170852028 + THE1C LTR MaLR 1 375 0 237 291 43 35 chr5 28778122 28778207 -170851943 + HAL1b LINE L1 509 597 -751 748 228 89 17 chr5 28778280 28778517 -170851633 + L1MC2 LINE L1 6038 6291 -53 2883 244 29 37 chr5 28778518 28779426 -170850724 + MLT1-int LTR MaLR 258 1127 -244 1017 214 61 36 chr5 28779461 28779901 -170850249 + L1M4 LINE L1 2778 3228 -2918 228 200 0 0 chr5 28781093 28781143 -170849007 + GA-rich Low_complexity Low_complexity 1 50 0 243 0 0 0 chr5 28781905 28781932 -170848218 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1027 273 138 12 chr5 28781941 28782760 -170847390 - L1ME1 LINE L1 -4 6442 5491 532 213 15 7 chr5 28782750 28782886 -170847264 - L1ME1 LINE L1 -2089 4337 4201 * 512 216 72 18 chr5 28782909 28783076 -170847074 + L1MC5 LINE L1 7017 7192 -769 * 1184 162 37 21 chr5 28783072 28783437 -170846713 - L1ME1 LINE L1 -4480 1946 1489 880 236 45 63 chr5 28783455 28783789 -170846361 - L1ME1 LINE L1 -6071 355 28 4674 216 45 1 chr5 28783795 28785062 -170845088 + L1MC2 LINE L1 5016 6335 -9 483 296 17 29 chr5 28785879 28786051 -170844099 - L3 LINE CR1 -772 805 636 229 343 125 33 chr5 28786428 28786795 -170843355 + L2 LINE L2 711 1111 -2203 1559 238 42 27 chr5 28786797 28787247 -170842903 - MLT1C LTR MaLR 0 467 11 2135 129 0 3 chr5 28787656 28788008 -170842142 - AluSg SINE Alu 0 310 1 227 375 47 63 chr5 28788128 28788429 -170841721 + L2 LINE L2 1862 2157 -1157 348 267 47 0 chr5 28788532 28788618 -170841532 - L1MC4 LINE L1 -1339 6703 6614 232 138 69 0 chr5 28788618 28788676 -170841474 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 372 270 0 0 chr5 28788676 28788765 -170841385 + L1MC4 LINE L1 6614 6702 -1340 264 148 0 0 chr5 28788768 28788829 -170841321 + (TA)n Simple_repeat Simple_repeat 2 62 0 346 255 0 43 chr5 28788832 28788926 -170841224 + L1MC4 LINE L1 6614 6703 -1339 314 284 23 0 chr5 28788938 28789026 -170841124 + L1MC4 LINE L1 6614 6703 -1339 993 106 0 0 chr5 28789029 28789209 -170840941 + (TA)n Simple_repeat Simple_repeat 1 180 0 368 271 0 70 chr5 28789218 28789347 -170840803 + L1MC4 LINE L1 6614 6733 -1309 380 37 19 0 chr5 28789422 28789476 -170840674 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 3344 87 5 143 chr5 28789674 28790339 -170839811 + L1PA7 LINE L1 5330 5902 -253 42127 37 22 1 chr5 28790340 28796365 -170833785 + L1PA2 LINE L1 1 6155 0 2102 48 0 8 chr5 28796518 28796786 -170833364 + L1PA7 LINE L1 5888 6153 -1 21 57 0 0 chr5 28797123 28797158 -170832992 + AT_rich Low_complexity Low_complexity 1 35 0 21 82 0 0 chr5 28797311 28797360 -170832790 + AT_rich Low_complexity Low_complexity 1 49 0 599 285 67 62 chr5 28798960 28799318 -170830832 - L2 LINE L2 -457 2857 2498 1078 143 23 97 chr5 28799321 28799512 -170830638 - Tigger2 DNA MER2_type 0 2718 2549 1760 139 0 73 chr5 28799512 28799828 -170830322 - AluJb SINE Alu -19 293 1 1078 143 23 97 chr5 28799828 28799895 -170830255 - Tigger2 DNA MER2_type -169 2549 2479 553 290 30 71 chr5 28802594 28802863 -170827287 - L2 LINE L2 -1134 2180 1923 23 54 0 0 chr5 28803165 28803202 -170826948 + AT_rich Low_complexity Low_complexity 1 37 0 219 114 0 0 chr5 28804242 28804277 -170825873 + (CA)n Simple_repeat Simple_repeat 2 36 0 183 239 0 0 chr5 28804724 28804770 -170825380 + (TA)n Simple_repeat Simple_repeat 2 47 0 2184 218 29 8 chr5 28805124 28805252 -170824898 + L1MB2 LINE L1 5370 5494 -677 2167 113 0 7 chr5 28805252 28805552 -170824598 + AluSg SINE Alu 1 298 -12 2184 218 29 8 chr5 28805552 28806088 -170824062 + L1MB2 LINE L1 5494 6161 -10 28 71 0 0 chr5 28806743 28806799 -170823351 + AT_rich Low_complexity Low_complexity 1 56 0 201 158 0 0 chr5 28807012 28807050 -170823100 + T-rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr5 28807176 28807199 -170822951 + AT_rich Low_complexity Low_complexity 1 23 0 1997 206 52 82 chr5 28808351 28808982 -170821168 - LTR9 LTR ERV1 0 612 1 2096 109 3 32 chr5 28809362 28809673 -170820477 + AluSq SINE Alu 1 302 -11 647 148 0 8 chr5 28809673 28809795 -170820355 + (GGA)n Simple_repeat Simple_repeat 1 121 0 1122 234 151 34 chr5 28809847 28810265 -170819885 - MLT1C LTR MaLR 0 467 1 2133 118 3 0 chr5 28810654 28810951 -170819199 + AluSx SINE Alu 1 298 -14 301 238 0 38 chr5 28810963 28811043 -170819107 + MIR SINE MIR 186 262 0 301 331 95 25 chr5 28811337 28811579 -170818571 - MLT1H LTR MaLR -5 544 286 1662 219 133 5 chr5 28811975 28812404 -170817746 - MLT1D LTR MaLR -19 486 3 2056 159 82 20 chr5 28813334 28813737 -170816413 + MSTA LTR MaLR 1 428 0 8503 189 16 9 chr5 28813737 28815376 -170814774 + MSTA-int LTR MaLR 1 1651 0 1250 163 262 23 chr5 28815378 28815722 -170814428 + MSTA LTR MaLR 3 428 0 201 175 0 0 chr5 28816235 28816275 -170813875 + (TATG)n Simple_repeat Simple_repeat 4 43 0 27 29 0 0 chr5 28816356 28816390 -170813760 + AT_rich Low_complexity Low_complexity 1 34 0 220 154 62 31 chr5 28816448 28816513 -170813637 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 5047 201 32 7 chr5 28818063 28818630 -170811520 - L1P5 LINE L1 -379 5777 5225 194 0 0 37 chr5 28818630 28818657 -170811493 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5047 201 32 7 chr5 28818657 28819765 -170810385 - L1P5 LINE L1 -931 5225 4061 28 0 0 0 chr5 28819772 28819800 -170810350 + AT_rich Low_complexity Low_complexity 1 28 0 230 247 13 39 chr5 28820622 28820699 -170809451 + CT-rich Low_complexity Low_complexity 4 78 0 310 252 126 17 chr5 28820783 28820902 -170809248 - L2 LINE L2 -4 3309 3178 24 0 0 0 chr5 28820961 28820985 -170809165 + AT_rich Low_complexity Low_complexity 1 24 0 1772 147 76 17 chr5 28821332 28821686 -170808464 - THE1C LTR MaLR 0 375 1 6560 129 224 43 chr5 28821686 28823024 -170807126 - THE1C-int LTR MaLR 0 1580 1 1852 141 83 3 chr5 28823024 28823351 -170806799 - THE1C LTR MaLR 0 375 23 24 67 0 0 chr5 28823558 28823603 -170806547 + AT_rich Low_complexity Low_complexity 1 45 0 33 25 0 0 chr5 28824373 28824413 -170805737 + AT_rich Low_complexity Low_complexity 1 40 0 2152 116 0 0 chr5 28824861 28825155 -170804995 - AluY SINE Alu -17 294 1 22 0 0 0 chr5 28825208 28825230 -170804920 + AT_rich Low_complexity Low_complexity 1 22 0 1230 249 78 19 chr5 28825635 28826009 -170804141 - MSTD LTR MaLR 0 396 1 5546 264 63 28 chr5 28826009 28827684 -170802466 - MSTD-int LTR MaLR 0 1735 2 1431 275 18 10 chr5 28827686 28828079 -170802071 - MSTD LTR MaLR 0 396 1 721 290 76 37 chr5 28828828 28829156 -170800994 + MER2 DNA MER2_type 2 342 -3 21 0 0 0 chr5 28829403 28829424 -170800726 + AT_rich Low_complexity Low_complexity 1 21 0 203 291 0 0 chr5 28831327 28831382 -170798768 + (TA)n Simple_repeat Simple_repeat 1 55 0 2283 45 52 3 chr5 28831656 28831945 -170798205 - AluY SINE Alu -8 303 1 36 23 0 0 chr5 28832759 28832802 -170797348 + AT_rich Low_complexity Low_complexity 1 43 0 23 78 0 0 chr5 28832949 28833000 -170797150 + AT_rich Low_complexity Low_complexity 1 51 0 234 368 0 0 chr5 28833807 28833883 -170796267 + MIR3 SINE MIR 115 190 -18 1245 75 0 0 chr5 28834121 28834280 -170795870 + ERVL-D LTR ERVL 2425 2583 -3181 222 37 0 0 chr5 28834280 28834307 -170795843 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 7590 22 0 0 chr5 28834307 28835680 -170794470 - L1PA2 LINE L1 -13 6142 4770 7980 38 0 1 chr5 28835680 28836650 -170793500 + L1P LINE L1 3865 4833 -1313 * 19947 37 0 0 chr5 28836640 28839102 -170791048 + L1P LINE L1 1399 3861 -2285 17508 179 22 16 chr5 28839102 28841672 -170788478 + ERVL-D LTR ERVL 2579 5173 -591 2391 106 35 54 chr5 28841672 28842078 -170788072 - MER48 LTR ERV1 0 398 1 17508 179 22 16 chr5 28842078 28842672 -170787478 + ERVL-D LTR ERVL 5173 5762 -2 1235 147 36 9 chr5 28842672 28842793 -170787357 + Ricksha DNA DNA 347 473 -781 1618 185 18 110 chr5 28842859 28843312 -170786838 + MLT2D LTR ERVL 143 553 0 2060 183 21 0 chr5 28843354 28843736 -170786414 + MLT1B LTR MaLR 1 390 0 476 267 80 53 chr5 28844022 28844247 -170785903 - MIR SINE MIR 0 262 32 5539 125 21 42 chr5 28844703 28845669 -170784481 + L1MA2 LINE L1 5353 6297 -7 22 0 0 0 chr5 28845748 28845770 -170784380 + AT_rich Low_complexity Low_complexity 1 22 0 766 293 176 29 chr5 28846687 28847130 -170783020 - HAL1 LINE L1 -4 2503 2127 983 248 94 49 chr5 28847130 28847577 -170782573 - MLT1C LTR MaLR 0 467 1 766 293 176 29 chr5 28847577 28847900 -170782250 - HAL1 LINE L1 -380 2127 1624 1904 194 3 0 chr5 28848181 28848541 -170781609 - L1PB3 LINE L1 -5 6149 5789 227 271 0 0 chr5 28848542 28848590 -170781560 + (TATG)n Simple_repeat Simple_repeat 3 50 0 1878 149 15 11 chr5 28848592 28849012 -170781138 - L1PB3 LINE L1 -376 5778 5262 417 311 259 23 chr5 28849262 28849703 -170780447 - HAL1 LINE L1 -940 1567 1023 1559 177 46 7 chr5 28849728 28850010 -170780140 - AluSx SINE Alu -13 299 7 2577 236 60 27 chr5 28850038 28850704 -170779446 + MER76 LTR ERV 1 688 0 456 282 90 116 chr5 28851506 28852491 -170777659 - L1MEc LINE L1 -4634 1762 803 189 0 0 0 chr5 28853112 28853133 -170777017 + (T)n Simple_repeat Simple_repeat 1 21 0 1844 110 0 8 chr5 28853787 28854050 -170776100 - AluSx SINE Alu -51 261 1 438 337 36 5 chr5 28855203 28855396 -170774754 - MIR SINE MIR -57 205 7 325 316 82 20 chr5 28855399 28855595 -170774555 + HERVL LTR ERVL 2340 2547 -3107 24 0 0 0 chr5 28856191 28856215 -170773935 + AT_rich Low_complexity Low_complexity 1 24 0 3104 245 33 31 chr5 28856757 28857792 -170772358 + L1MB8 LINE L1 4557 5596 -582 1642 175 34 3 chr5 28857792 28858083 -170772067 + AluJb SINE Alu 3 302 -10 3104 245 33 31 chr5 28858083 28858668 -170771482 + L1MB8 LINE L1 5596 6178 0 461 216 164 8 chr5 28859063 28859197 -170770953 - MER77 LTR ERV1 -7 598 444 204 125 0 0 chr5 28859911 28859943 -170770207 + (TA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr5 28860260 28860281 -170769869 + AT_rich Low_complexity Low_complexity 1 21 0 34 55 0 0 chr5 28860745 28860800 -170769350 + AT_rich Low_complexity Low_complexity 1 55 0 3101 188 26 47 chr5 28861793 28861943 -170768207 - L1MC1 LINE L1 -18 6315 6163 2009 93 0 18 chr5 28861943 28862221 -170767929 - AluSg SINE Alu -3 307 35 3101 188 26 47 chr5 28862221 28862788 -170767362 - L1MC1 LINE L1 -170 6163 5613 267 286 94 72 chr5 28863008 28863284 -170766866 - HAL1 LINE L1 -768 1739 1458 25 51 0 0 chr5 28863287 28863326 -170766824 + AT_rich Low_complexity Low_complexity 1 39 0 2017 234 18 24 chr5 28863377 28863925 -170766225 - L1 LINE L1 -1663 4483 3939 6722 140 25 7 chr5 28863936 28864626 -170765524 - Tigger1 DNA MER2_type -531 1887 1170 1901 144 24 0 chr5 28864626 28864917 -170765233 - AluSx SINE Alu -14 298 1 6722 140 25 7 chr5 28864917 28865303 -170764847 - Tigger1 DNA MER2_type -1248 1170 792 1651 219 38 14 chr5 28865307 28865673 -170764477 - Tigger1 DNA MER2_type -2042 376 2 29 70 0 0 chr5 28865673 28865730 -170764420 + AT_rich Low_complexity Low_complexity 1 57 0 10895 34 1 0 chr5 28865784 28867876 -170762274 - L1PA3 LINE L1 0 6155 4062 25 51 0 0 chr5 28868984 28869023 -170761127 + AT_rich Low_complexity Low_complexity 1 39 0 28 48 0 0 chr5 28870241 28870283 -170759867 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 28871582 28871603 -170758547 + AT_rich Low_complexity Low_complexity 1 21 0 283 315 97 24 chr5 28871617 28871782 -170758368 - L2 LINE L2 -139 3174 2998 2020 155 7 0 chr5 28872545 28872854 -170757296 - AluSx SINE Alu 0 312 2 485 285 7 0 chr5 28873003 28873154 -170756996 + L1PBa LINE L1 3 154 -6709 273 174 0 54 chr5 28873269 28873361 -170756789 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 214 263 26 13 chr5 28873609 28873685 -170756465 + (TTTA)n Simple_repeat Simple_repeat 1 77 0 18247 77 5 1 chr5 28874094 28876515 -170753635 + L1P LINE L1 1 2431 -3715 2177 54 0 4 chr5 28876531 28876809 -170753341 + L1PA5 LINE L1 5878 6154 0 316 202 24 48 chr5 28876834 28876918 -170753232 + L2 LINE L2 3190 3271 -1 405 282 101 7 chr5 28877020 28877169 -170752981 + MIR SINE MIR 4 166 -96 25 0 0 0 chr5 28878134 28878159 -170751991 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr5 28878739 28878781 -170751369 + AT_rich Low_complexity Low_complexity 1 42 0 28 29 0 0 chr5 28879224 28879259 -170750891 + AT_rich Low_complexity Low_complexity 1 35 0 1498 272 76 18 chr5 28879346 28880418 -170749732 - L1ME3 LINE L1 -222 5940 4799 716 252 79 14 chr5 28880439 28880717 -170749433 - L1ME3 LINE L1 -1518 4628 4333 333 337 134 18 chr5 28880823 28881099 -170749051 + L1ME3A LINE L1 5578 5885 -285 729 191 64 12 chr5 28882436 28882609 -170747541 + L1MA9 LINE L1 6131 6312 0 269 286 8 17 chr5 28883690 28883809 -170746341 + (TA)n Simple_repeat Simple_repeat 2 119 0 431 78 16 0 chr5 28883809 28883873 -170746277 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 398 320 20 34 chr5 28883957 28884104 -170746046 - MIR SINE MIR -113 149 5 18842 193 32 12 chr5 28885330 28889683 -170740467 + L1MA3 LINE L1 13 4457 -3108 6368 146 11 19 chr5 28889672 28891131 -170739019 + L1MA3 LINE L1 6281 7723 -1 * 23 68 0 0 chr5 28891391 28891435 -170738715 + AT_rich Low_complexity Low_complexity 1 44 0 5672 79 4 1 chr5 28891439 28892188 -170737962 - L1PA7 LINE L1 -3 6151 5401 1369 251 24 46 chr5 28892725 28893226 -170736924 + MLT1D LTR MaLR 16 505 0 25 83 0 0 chr5 28893361 28893421 -170736729 + AT_rich Low_complexity Low_complexity 1 60 0 24 53 0 0 chr5 28893518 28893556 -170736594 + AT_rich Low_complexity Low_complexity 1 38 0 417 248 39 26 chr5 28893714 28893867 -170736283 - L1ME1 LINE L1 -5 6161 6007 207 69 0 0 chr5 28893945 28893974 -170736176 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr5 28894204 28894234 -170735916 + AT_rich Low_complexity Low_complexity 1 30 0 383 235 30 18 chr5 28894772 28894938 -170735212 + (TA)n Simple_repeat Simple_repeat 2 169 0 218 173 40 40 chr5 28896340 28896415 -170733735 + L2 LINE L2 2831 2905 -367 183 310 123 37 chr5 28897134 28897321 -170732829 + MIR SINE MIR 60 262 0 249 417 11 0 chr5 28897991 28898166 -170731984 + L2 LINE L2 2496 2672 -642 240 111 0 0 chr5 28898189 28898225 -170731925 + (T)n Simple_repeat Simple_repeat 1 36 0 516 178 90 140 chr5 28898225 28898568 -170731582 - LTR7 LTR ERV1 -38 412 87 1324 81 47 8 chr5 28898570 28898804 -170731346 + SVA Other Other 455 697 -689 700 139 0 0 chr5 28898832 28898940 -170731210 + AluSq/x SINE Alu 1 108 -205 228 35 0 0 chr5 28898952 28898981 -170731169 + (CCAA)n Simple_repeat Simple_repeat 1 29 0 202 365 0 0 chr5 28899021 28899095 -170731055 + CT-rich Low_complexity Low_complexity 2 75 0 335 338 132 64 chr5 28899452 28900253 -170729897 + L1 LINE L1 535 1390 -5459 * 348 286 89 125 chr5 28899907 28900738 -170729412 - L1M2 LINE L1 -5442 1407 607 240 178 0 0 chr5 28901514 28901559 -170728591 + SUBTEL_sa Satellite Satellite 117 161 -13 21 57 0 0 chr5 28902968 28903003 -170727147 + AT_rich Low_complexity Low_complexity 1 35 0 21 57 0 0 chr5 28904009 28904044 -170726106 + AT_rich Low_complexity Low_complexity 1 35 0 566 302 23 23 chr5 28904064 28904279 -170725871 - MER20 DNA MER1_type -1 218 4 311 288 70 23 chr5 28904415 28904630 -170725520 + L1 LINE L1 5080 5304 -1544 312 295 39 0 chr5 28904658 28904736 -170725414 + L1MCa LINE L1 2 82 -6777 775 179 90 4 chr5 28904764 28904998 -170725152 + L1MCa LINE L1 2745 2998 -3959 1402 326 5 29 chr5 28904998 28905753 -170724397 + L1M4 LINE L1 3718 4454 -1692 400 331 39 6 chr5 28906086 28906264 -170723886 - HERVL LTR ERVL -1331 4433 4250 470 252 104 56 chr5 28906300 28906604 -170723546 - HERVL LTR ERVL -1337 4148 3831 652 196 85 13 chr5 28906638 28906791 -170723359 + MER20 DNA MER1_type 55 218 -1 2097 157 11 11 chr5 28907542 28907917 -170722233 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr5 28907986 28908019 -170722131 + AT_rich Low_complexity Low_complexity 1 33 0 180 375 14 14 chr5 28908539 28908611 -170721539 - L2 LINE L2 -31 3282 3211 279 301 136 0 chr5 28908672 28908775 -170721375 + MER5C DNA MER1_type 8 124 -200 23 68 0 0 chr5 28908920 28908964 -170721186 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 28909730 28909756 -170720394 + AT_rich Low_complexity Low_complexity 1 26 0 30 45 0 0 chr5 28909974 28910018 -170720132 + AT_rich Low_complexity Low_complexity 1 44 0 744 68 17 8 chr5 28911587 28911704 -170718446 + (GAAA)n Simple_repeat Simple_repeat 2 119 0 183 261 0 0 chr5 28912277 28912323 -170717827 + L3b LINE CR1 1536 1581 -2 22 56 0 0 chr5 28912494 28912530 -170717620 + AT_rich Low_complexity Low_complexity 1 36 0 198 103 0 0 chr5 28912720 28912749 -170717401 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 285 333 37 15 chr5 28913119 28913254 -170716896 - MIR SINE MIR -34 228 91 22 56 0 0 chr5 28913279 28913315 -170716835 + AT_rich Low_complexity Low_complexity 1 36 0 1224 195 70 8 chr5 28915091 28915332 -170714818 - MSTB LTR MaLR 0 426 171 4352 210 110 4 chr5 28915337 28916265 -170713885 - MSTB-int LTR MaLR -625 1026 1 2275 190 17 9 chr5 28916265 28916686 -170713464 - MSTB LTR MaLR 0 426 3 482 108 12 0 chr5 28917603 28917686 -170712464 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 2145 125 0 3 chr5 28918344 28918655 -170711495 - AluSx SINE Alu -2 310 1 335 264 23 0 chr5 28918928 28919015 -170711135 + L1MC4 LINE L1 6614 6702 -1340 183 186 0 0 chr5 28919402 28919445 -170710705 + (TA)n Simple_repeat Simple_repeat 1 43 0 2012 131 0 7 chr5 28919488 28919779 -170710371 - AluSx SINE Alu -8 304 16 1151 238 38 3 chr5 28920222 28920512 -170709638 + AluJo SINE Alu 2 301 -1 346 246 24 16 chr5 28920920 28921046 -170709104 + (TA)n Simple_repeat Simple_repeat 1 127 0 235 296 23 0 chr5 28921046 28921134 -170709016 - L1MC4 LINE L1 -1339 6703 6614 222 209 23 0 chr5 28921138 28921181 -170708969 + GA-rich Low_complexity Low_complexity 1 44 0 704 264 0 28 chr5 28921194 28921372 -170708778 - MLT2C2 LTR ERVL -89 375 203 310 138 0 17 chr5 28921393 28921451 -170708699 - MLT2C2 LTR ERVL -407 57 1 31 58 0 0 chr5 28921984 28922036 -170708114 + AT_rich Low_complexity Low_complexity 1 52 0 2240 83 0 17 chr5 28922356 28922658 -170707492 + AluY SINE Alu 1 297 -14 29 47 0 0 chr5 28922859 28922902 -170707248 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr5 28922927 28922948 -170707202 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 28922986 28923009 -170707141 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 28923627 28923655 -170706495 + AT_rich Low_complexity Low_complexity 1 28 0 205 214 0 0 chr5 28924221 28924263 -170705887 - L2 LINE L2 0 3313 3272 265 214 56 0 chr5 28924295 28924384 -170705766 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 3472 218 44 36 chr5 28925757 28926556 -170703594 - L1MB4 LINE L1 -1 6415 5592 2273 111 0 0 chr5 28926556 28926862 -170703288 - AluSg SINE Alu -4 306 1 3472 218 44 36 chr5 28926862 28927344 -170702806 - L1MB4 LINE L1 -824 5592 5115 972 265 42 11 chr5 28927355 28927714 -170702436 - L1MB4 LINE L1 -3594 2788 2419 2818 244 77 57 chr5 28927783 28928972 -170701178 - L1MB4 LINE L1 -4480 1904 693 28 71 0 0 chr5 28932021 28932077 -170698073 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr5 28932320 28932342 -170697808 + AT_rich Low_complexity Low_complexity 1 22 0 1762 114 9 82 chr5 28932345 28932661 -170697489 - AluSx SINE Alu -19 293 1 198 293 35 0 chr5 28932675 28932733 -170697417 - L2 LINE L2 -62 3251 3192 261 357 54 36 chr5 28932771 28932939 -170697211 - L2 LINE L2 -259 3054 2884 21 82 0 0 chr5 28932952 28933001 -170697149 + AT_rich Low_complexity Low_complexity 1 49 0 2082 102 3 0 chr5 28933314 28933597 -170696553 + AluY SINE Alu 1 284 -27 423 0 0 0 chr5 28933597 28933644 -170696506 + (CA)n Simple_repeat Simple_repeat 2 48 0 21 36 0 0 chr5 28933705 28933733 -170696417 + AT_rich Low_complexity Low_complexity 1 28 0 195 318 35 75 chr5 28933783 28933956 -170696194 - L2 LINE L2 -212 3060 2895 24 32 0 0 chr5 28933994 28934025 -170696125 + AT_rich Low_complexity Low_complexity 1 31 0 659 236 99 81 chr5 28934106 28934428 -170695722 - L1ME2 LINE L1 -1 6163 5836 1696 287 63 39 chr5 28934431 28934602 -170695548 - L1MEc LINE L1 -4242 2154 1989 1594 70 124 77 chr5 28934602 28934861 -170695289 + AluY SINE Alu 28 298 -13 1696 287 63 39 chr5 28934861 28935557 -170694593 - L1MEc LINE L1 -4407 1989 1266 4814 171 24 21 chr5 28935564 28936868 -170693282 - L1PB3 LINE L1 -4 6866 5554 638 243 0 29 chr5 28936873 28937083 -170693067 - L1PB3 LINE L1 -1713 5149 4946 1992 163 45 59 chr5 28937101 28937581 -170692569 + MLT2A2 LTR ERVL 1 500 -54 261 119 0 0 chr5 28937585 28937627 -170692523 + (TA)n Simple_repeat Simple_repeat 1 42 0 552 203 90 15 chr5 28937627 28937760 -170692390 - L1ME2 LINE L1 -29 6135 5993 207 232 18 0 chr5 28937763 28937819 -170692331 + (TA)n Simple_repeat Simple_repeat 1 57 0 736 171 35 31 chr5 28937821 28937992 -170692158 - MLT2A2 LTR ERVL -35 504 293 341 111 0 0 chr5 28938024 28938078 -170692072 + MLT2A1 LTR ERVL 391 444 0 7204 224 15 22 chr5 28938081 28939118 -170691032 - L1PB3 LINE L1 -1923 4939 3919 1751 151 70 25 chr5 28939118 28939475 -170690675 - THE1C LTR MaLR -2 373 1 7204 224 15 22 chr5 28939475 28940346 -170689804 - L1PB3 LINE L1 -2943 3919 3044 1749 194 126 8 chr5 28940361 28940733 -170689417 - MSTA LTR MaLR -12 416 1 8315 168 11 48 chr5 28940733 28942354 -170687796 - MSTA-int LTR MaLR 0 1580 21 1781 163 127 18 chr5 28942366 28942752 -170687398 - MSTA LTR MaLR 0 428 1 5265 240 62 21 chr5 28942752 28946575 -170683575 - L1PB3 LINE L1 -3814 3048 3 1997 157 7 0 chr5 28946724 28947030 -170683120 + AluSx SINE Alu 2 309 -3 268 321 97 24 chr5 28947791 28947956 -170682194 + L2 LINE L2 2998 3174 -139 21 0 0 0 chr5 28947970 28947991 -170682159 + AT_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr5 28949290 28949332 -170680818 + AT_rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr5 28950550 28950589 -170679561 + AT_rich Low_complexity Low_complexity 1 39 0 10918 34 0 0 chr5 28951697 28953789 -170676361 + L1PA3 LINE L1 4062 6155 0 29 70 0 0 chr5 28953843 28953900 -170676250 + AT_rich Low_complexity Low_complexity 1 57 0 1651 219 38 14 chr5 28953900 28954266 -170675884 + Tigger1 DNA MER2_type 2 376 -2042 6698 141 25 7 chr5 28954270 28954656 -170675494 + Tigger1 DNA MER2_type 792 1170 -1248 1874 148 24 0 chr5 28954656 28954947 -170675203 + AluSx SINE Alu 1 298 -14 6698 141 25 7 chr5 28954947 28955637 -170674513 + Tigger1 DNA MER2_type 1170 1887 -531 2017 234 18 24 chr5 28955648 28956196 -170673954 + L1 LINE L1 3939 4483 -1663 25 51 0 0 chr5 28956247 28956286 -170673864 + AT_rich Low_complexity Low_complexity 1 39 0 267 286 94 72 chr5 28956289 28956565 -170673585 + HAL1 LINE L1 1458 1739 -768 2647 185 35 2 chr5 28956785 28957330 -170672820 + L1MC1 LINE L1 5613 6175 -158 4195 224 16 1 chr5 28957437 28958301 -170671849 - L1M1 LINE L1 -6676 889 13 9623 48 10 0 chr5 28958730 28960224 -170669926 + L1P2 LINE L1 4152 5657 -498 24 53 0 0 chr5 28960464 28960502 -170669648 + AT_rich Low_complexity Low_complexity 1 38 0 417 248 39 26 chr5 28960659 28960812 -170669338 - L1ME1 LINE L1 -5 6161 6007 207 69 0 0 chr5 28960890 28960919 -170669231 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr5 28961148 28961178 -170668972 + AT_rich Low_complexity Low_complexity 1 30 0 298 207 24 18 chr5 28961716 28961890 -170668260 + (TA)n Simple_repeat Simple_repeat 1 175 0 25 83 0 0 chr5 28962581 28962641 -170667509 + AT_rich Low_complexity Low_complexity 1 60 0 1355 254 24 46 chr5 28962776 28963277 -170666873 - MLT1D LTR MaLR 0 505 16 5601 80 4 1 chr5 28963814 28964563 -170665587 + L1PA7 LINE L1 5401 6151 -3 23 68 0 0 chr5 28964567 28964611 -170665539 + AT_rich Low_complexity Low_complexity 1 44 0 6094 148 12 19 chr5 28964874 28966334 -170663816 - L1MA3 LINE L1 -1 7723 6281 * 14088 193 37 16 chr5 28966323 28969862 -170660288 - L1MA3 LINE L1 -3108 4457 840 7083 54 6 0 chr5 28969968 28971328 -170658822 + L1PA5 LINE L1 4788 6154 0 1722 214 119 35 chr5 28971752 28972187 -170657963 + MER70A LTR ERVL 1 472 0 463 310 61 56 chr5 28973705 28973918 -170656232 - LTR33 LTR ERVL -297 224 11 23 33 0 0 chr5 28974404 28974434 -170655716 + AT_rich Low_complexity Low_complexity 1 30 0 28 0 0 0 chr5 28974790 28974818 -170655332 + AT_rich Low_complexity Low_complexity 1 28 0 209 125 25 0 chr5 28975704 28975744 -170654406 + (TA)n Simple_repeat Simple_repeat 2 42 0 1661 143 91 20 chr5 28976778 28977128 -170653022 + THE1C LTR MaLR 1 375 0 1885 152 0 7 chr5 28977697 28977986 -170652164 - AluSg SINE Alu -23 287 1 598 372 42 21 chr5 28979729 28980154 -170649996 + MERVL LTR ERVL 4177 4610 -875 252 176 103 7 chr5 28980625 28980761 -170649389 + (TA)n Simple_repeat Simple_repeat 2 150 0 881 298 84 17 chr5 28980876 28981339 -170648811 + L1MC4 LINE L1 5412 5905 -1903 545 295 53 66 chr5 28981838 28982128 -170648022 + L1MC4 LINE L1 6641 6819 -966 180 77 0 0 chr5 28982220 28982246 -170647904 + (TG)n Simple_repeat Simple_repeat 1 26 0 446 306 46 32 chr5 28982386 28982759 -170647391 + L1MC4 LINE L1 7117 7494 -548 652 270 90 4 chr5 28983113 28983380 -170646770 - L1ME1 LINE L1 -1 6165 5876 22 35 0 0 chr5 28983429 28983458 -170646692 + AT_rich Low_complexity Low_complexity 1 29 0 181 75 50 0 chr5 28983787 28983827 -170646323 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 367 205 46 7 chr5 28983827 28983978 -170646172 + (TA)n Simple_repeat Simple_repeat 2 158 0 3269 134 24 7 chr5 28984070 28984736 -170645414 + LTR1 LTR ERV1 17 785 0 2099 128 7 0 chr5 28985059 28985365 -170644785 - AluY SINE Alu -3 308 1 21 36 0 0 chr5 28986085 28986113 -170644037 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr5 28987412 28987442 -170642708 + AT_rich Low_complexity Low_complexity 1 30 0 350 66 0 82 chr5 28987734 28987795 -170642355 - MLT2A1 LTR ERVL 0 444 389 5503 156 45 17 chr5 28987813 28988884 -170641266 - HERVL-A1 LTR ERVL -155 5499 4399 * 17653 83 16 12 chr5 28988879 28991286 -170638864 - HERVL-A1 LTR ERVL -3238 2416 1 3101 78 32 7 chr5 28991286 28991334 -170638816 - MLT2A1 LTR ERVL 0 444 399 333 0 0 0 chr5 28991334 28991371 -170638779 + (CA)n Simple_repeat Simple_repeat 2 38 0 3101 78 32 7 chr5 28991371 28991755 -170638395 - MLT2A1 LTR ERVL -45 399 1 28 79 0 0 chr5 28992532 28992595 -170637555 + AT_rich Low_complexity Low_complexity 1 63 0 1956 121 39 0 chr5 28993125 28993407 -170636743 + AluSq SINE Alu 1 293 -20 423 0 0 0 chr5 28993548 28993595 -170636555 + (TG)n Simple_repeat Simple_repeat 2 48 0 2503 56 0 0 chr5 28994414 28994720 -170635430 + AluY SINE Alu 1 306 -5 236 277 138 44 chr5 28995251 28995410 -170634740 + L2 LINE L2 2918 3091 -181 22 0 0 0 chr5 28996867 28996889 -170633261 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 28996929 28996951 -170633199 + AT_rich Low_complexity Low_complexity 1 22 0 2235 263 47 64 chr5 28997783 28998860 -170631290 - L1M4c LINE L1 -4440 2385 1292 1975 149 3 0 chr5 28998860 28999156 -170630994 + AluSx SINE Alu 12 308 -4 2235 263 47 64 chr5 28999156 28999297 -170630853 - L1M4c LINE L1 -5533 1292 1150 1529 210 40 0 chr5 28999297 28999597 -170630553 + AluJo SINE Alu 1 312 0 2235 263 47 64 chr5 28999597 28999704 -170630446 - L1M4c LINE L1 -5675 1150 948 5886 92 13 2 chr5 28999715 29001067 -170629083 - L1PA8A LINE L1 -2 6129 4768 7080 133 23 3 chr5 29001068 29002215 -170627935 + L1PA8A LINE L1 3624 4793 -1353 372 261 31 77 chr5 29002209 29002404 -170627746 - L1M4c LINE L1 -5593 949 764 * 5647 251 36 10 chr5 29002513 29003854 -170626296 - ERVL-B3 LTR ERVL -4388 1376 1 2713 193 37 17 chr5 29003854 29003901 -170626249 - MLT2B3 LTR ERVL 0 554 509 459 0 0 0 chr5 29003901 29003952 -170626198 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 2713 193 37 17 chr5 29003952 29004444 -170625706 - MLT2B3 LTR ERVL -45 509 4 22 35 0 0 chr5 29004462 29004491 -170625659 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr5 29004574 29004598 -170625552 + AT_rich Low_complexity Low_complexity 1 24 0 933 81 22 0 chr5 29006217 29006353 -170623797 + L1PA10 LINE L1 6021 6159 -9 23 68 0 0 chr5 29006556 29006600 -170623550 + AT_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr5 29006702 29006746 -170623404 + AT_rich Low_complexity Low_complexity 1 44 0 34526 70 14 1 chr5 29007681 29012289 -170617861 + L1P LINE L1 11 4675 -1471 5319 85 33 1 chr5 29012401 29013190 -170616960 - HERVL-A1 LTR ERVL -4840 814 1 2815 79 53 7 chr5 29013190 29013238 -170616912 - MLT2A1 LTR ERVL 0 444 400 333 0 0 0 chr5 29013238 29013275 -170616875 + (CA)n Simple_repeat Simple_repeat 2 38 0 2815 79 53 7 chr5 29013275 29013644 -170616506 - MLT2A1 LTR ERVL -44 400 8 4138 240 36 4 chr5 29013841 29015074 -170615076 - L1 LINE L1 -2660 3486 2214 276 325 75 20 chr5 29015375 29015575 -170614575 + LTR16C LTR ERVL 279 489 -2 21 36 0 0 chr5 29016502 29016530 -170613620 + AT_rich Low_complexity Low_complexity 1 28 0 613 177 94 22 chr5 29016638 29016819 -170613331 + MER3 DNA MER1_type 7 200 -9 4440 159 80 8 chr5 29016935 29018087 -170612063 - L1PB1 LINE L1 -66 6085 4849 1922 129 7 10 chr5 29018187 29018490 -170611660 - AluSx SINE Alu -10 302 1 872 137 172 20 chr5 29018491 29018695 -170611455 - L1MB2 LINE L1 -343 5828 5594 322 309 67 11 chr5 29018972 29019150 -170611000 - L1M4 LINE L1 -2154 3992 3805 1137 240 58 33 chr5 29019733 29020088 -170610062 + MLT1A1 LTR MaLR 3 365 0 401 173 55 16 chr5 29020668 29020795 -170609355 - Alu SINE Alu -2 308 177 22 35 0 0 chr5 29021026 29021055 -170609095 + AT_rich Low_complexity Low_complexity 1 29 0 226 229 21 0 chr5 29021622 29021670 -170608480 + GA-rich Low_complexity Low_complexity 2 50 0 2027 119 0 29 chr5 29021737 29022049 -170608101 - AluSx SINE Alu -9 303 1 353 314 50 7 chr5 29022068 29022208 -170607942 + MIR SINE MIR 3 148 -114 567 193 18 0 chr5 29022387 29022501 -170607649 + MER46C DNA MER2_type 79 194 -144 189 74 0 0 chr5 29022800 29022827 -170607323 + (TG)n Simple_repeat Simple_repeat 2 28 0 352 347 58 26 chr5 29024727 29024917 -170605233 + LTR33 LTR ERVL 1 196 -325 232 360 10 0 chr5 29025031 29025131 -170605019 + LTR33 LTR ERVL 366 466 -55 26 50 0 0 chr5 29025288 29025328 -170604822 + AT_rich Low_complexity Low_complexity 1 40 0 534 285 21 11 chr5 29025615 29025801 -170604349 + LTR33 LTR ERVL 326 513 -8 1386 251 181 43 chr5 29027367 29028040 -170602110 + LTR41 LTR ERVL 2 767 -6 334 218 24 73 chr5 29028100 29028224 -170601926 + L1ME2 LINE L1 5660 5777 -385 416 317 49 19 chr5 29029116 29029321 -170600829 + LTR16C LTR ERVL 279 489 -2 21 36 0 0 chr5 29030259 29030287 -170599863 + AT_rich Low_complexity Low_complexity 1 28 0 864 185 56 26 chr5 29030395 29030590 -170599560 + MER3 DNA MER1_type 7 207 -2 27 81 0 0 chr5 29031200 29031262 -170598888 + AT_rich Low_complexity Low_complexity 1 62 0 1580 230 26 15 chr5 29031823 29032214 -170597936 + LTR52 LTR ERVL 1 395 -26 2719 234 19 27 chr5 29032240 29032915 -170597235 + LTR52-int LTR ERVL 4 673 -2883 405 221 23 0 chr5 29032938 29033024 -170597126 + LTR52-int LTR ERVL 846 933 -2623 3746 251 57 73 chr5 29033093 29034756 -170595394 + LTR52-int LTR ERVL 1132 2768 -2917 2449 128 186 20 chr5 29034757 29035267 -170594883 + LTR49 LTR ERV1 1 595 0 572 140 50 0 chr5 29035267 29035367 -170594783 + LTR52-int LTR ERVL 2766 2870 -2815 310 191 169 0 chr5 29035484 29035573 -170594577 + L1ME2 LINE L1 5804 5907 -257 2391 76 3 3 chr5 29035807 29036108 -170594042 - AluSp SINE Alu -12 301 1 2098 118 0 3 chr5 29036361 29036682 -170593468 - AluSx SINE Alu 0 320 1 30 27 0 0 chr5 29036908 29036945 -170593205 + AT_rich Low_complexity Low_complexity 1 37 0 1962 177 21 8 chr5 29037034 29037419 -170592731 + L1MA6 LINE L1 5902 6291 -9 2133 105 0 43 chr5 29037439 29037763 -170592387 - AluSx SINE Alu -2 310 1 1933 134 0 3 chr5 29038112 29038395 -170591755 - AluSg SINE Alu -22 288 7 402 261 155 18 chr5 29038585 29038811 -170591339 + LTR50 LTR ERVL 12 268 -527 236 328 0 0 chr5 29040667 29040731 -170589419 + MER20B DNA MER1_type 86 149 -634 1975 236 40 2 chr5 29042166 29042610 -170587540 - LTR53 LTR ERVL -31 488 28 636 221 21 0 chr5 29042773 29042913 -170587237 + L1PB4 LINE L1 6008 6150 -6 1903 165 131 8 chr5 29043091 29043472 -170586678 - MSTA LTR MaLR 0 428 1 8434 164 8 43 chr5 29043472 29045107 -170585043 - MSTA-int LTR MaLR 0 1580 3 1572 174 174 8 chr5 29045109 29045476 -170584674 - MSTA LTR MaLR 0 428 1 1154 112 0 22 chr5 29045643 29045821 -170584329 - MSTA-int LTR MaLR -94 1486 1313 582 342 108 36 chr5 29046299 29046773 -170583377 + L2 LINE L2 2804 3311 -2 188 301 55 0 chr5 29046848 29046921 -170583229 - L2 LINE L2 -536 2778 2702 421 307 23 17 chr5 29048469 29048645 -170581505 + MER45A DNA AcHobo 1 177 -1 5553 155 62 13 chr5 29050008 29051126 -170579024 - Tigger3b DNA MER2_type 0 1231 41 378 225 56 0 chr5 29051144 29051233 -170578917 + MER69 DNA AcHobo 2425 2518 -8 843 26 61 0 chr5 29051338 29051518 -170578632 + L1PA4 LINE L1 6031 6217 0 496 375 19 16 chr5 29051520 29051837 -170578313 - HERV16 LTR ERVL -2105 2891 2574 1862 117 71 0 chr5 29052771 29053052 -170577098 + AluSg SINE Alu 1 301 -9 2917 200 30 12 chr5 29053245 29053839 -170576311 - MER6A DNA MER2_type 0 605 1 357 24 0 0 chr5 29053865 29053907 -170576243 + (CA)n Simple_repeat Simple_repeat 1 42 0 28 29 0 0 chr5 29054431 29054466 -170575684 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 29054663 29054686 -170575464 + AT_rich Low_complexity Low_complexity 1 23 0 578 221 100 122 chr5 29054686 29055097 -170575053 - MER93a LTR ERV1 0 402 1 278 385 36 15 chr5 29055428 29055623 -170574527 + L2 LINE L2 1889 2087 -1227 254 294 136 17 chr5 29055627 29055804 -170574346 + L2 LINE L2 2463 2660 -654 1679 193 36 14 chr5 29056080 29056437 -170573713 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr5 29057775 29057797 -170572353 + AT_rich Low_complexity Low_complexity 1 22 0 1726 71 4 8 chr5 29058130 29058370 -170571780 + L1PA8 LINE L1 5934 6172 0 312 27 0 0 chr5 29058733 29058770 -170571380 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1773 202 26 21 chr5 29059274 29059660 -170570490 - MLT1B LTR MaLR 0 390 3 37 0 0 0 chr5 29061027 29061064 -170569086 + AT_rich Low_complexity Low_complexity 1 37 0 242 108 0 0 chr5 29061104 29061141 -170569009 - L1MCa LINE L1 -5275 1151 1115 1046 201 65 77 chr5 29064021 29064374 -170565776 + LTR49 LTR ERV1 1 349 -246 207 0 0 0 chr5 29064412 29064435 -170565715 + (A)n Simple_repeat Simple_repeat 1 23 0 350 199 84 96 chr5 29064442 29064608 -170565542 + LTR48 LTR ERV1 624 787 0 314 294 0 0 chr5 29065046 29065114 -170565036 + tRNA-Glu-GAG tRNA tRNA 8 75 0 26 50 0 0 chr5 29066470 29066510 -170563640 + AT_rich Low_complexity Low_complexity 1 40 0 7472 30 5 0 chr5 29067396 29068882 -170561268 - L1PA4 LINE L1 0 6155 4666 8463 29 1 0 chr5 29068882 29069898 -170560252 + L1PA4 LINE L1 3640 4656 -1490 1478 186 27 10 chr5 29070851 29071147 -170559003 - AluJb SINE Alu -7 305 5 189 147 0 0 chr5 29071433 29071467 -170558683 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 710 233 24 63 chr5 29071467 29071509 -170558641 - MLT2D LTR ERVL 0 414 372 408 20 0 0 chr5 29071509 29071558 -170558592 + (TG)n Simple_repeat Simple_repeat 2 50 0 710 233 24 63 chr5 29071558 29071721 -170558429 - MLT2D LTR ERVL -42 372 217 * 744 179 134 6 chr5 29071713 29071892 -170558258 - MLT1B LTR MaLR -188 202 1 22 80 0 0 chr5 29071935 29071985 -170558165 + AT_rich Low_complexity Low_complexity 1 50 0 11972 148 54 40 chr5 29073508 29074028 -170556122 + Tigger1 DNA MER2_type 6 517 -1901 1834 169 24 0 chr5 29074028 29074323 -170555827 + AluSx SINE Alu 1 302 -10 11972 148 54 40 chr5 29074323 29076113 -170554037 + Tigger1 DNA MER2_type 517 2347 -71 2218 255 61 24 chr5 29076114 29076815 -170553335 - MER50 LTR ERV1 0 734 8 412 181 0 0 chr5 29076821 29076893 -170553257 + Tigger1 DNA MER2_type 2347 2418 0 213 347 40 52 chr5 29077001 29077174 -170552976 - MIR SINE MIR -2 260 90 251 192 0 19 chr5 29077326 29077378 -170552772 - MLT1G1 LTR MaLR -2 540 490 405 337 15 7 chr5 29077446 29077625 -170552525 - MLT1G1 LTR MaLR -186 391 248 21 0 0 0 chr5 29077998 29078019 -170552131 + AT_rich Low_complexity Low_complexity 1 21 0 372 43 0 0 chr5 29078404 29078450 -170551700 + (CA)n Simple_repeat Simple_repeat 1 46 0 288 171 86 0 chr5 29078460 29078530 -170551620 + MSTC LTR MaLR 336 411 -17 1382 222 50 58 chr5 29079010 29079407 -170550743 + MSTD LTR MaLR 3 396 0 2311 144 0 18 chr5 29079487 29079869 -170550281 - THE1C LTR MaLR 0 375 1 4573 115 2 2 chr5 29079869 29080504 -170549646 - THE1C-int LTR MaLR 0 1580 946 1819 141 3 21 chr5 29080526 29080816 -170549334 + THE1-int LTR MaLR 665 949 -631 306 337 63 11 chr5 29080873 29081048 -170549102 - HAL1 LINE L1 -1029 1478 1295 555 351 94 23 chr5 29081138 29081616 -170548534 - HAL1 LINE L1 -1785 722 211 215 0 67 0 chr5 29082384 29082414 -170547736 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 329 326 0 0 chr5 29082424 29082519 -170547631 - MER69A DNA AcHobo -82 95 1 496 258 14 120 chr5 29083007 29083224 -170546926 - L2 LINE L2 -349 2965 2772 829 190 45 15 chr5 29083890 29084090 -170546060 - L1MA7 LINE L1 0 6291 6086 331 148 0 0 chr5 29084135 29084189 -170545961 - L1MA7 LINE L1 -193 6098 6045 2072 112 0 29 chr5 29085578 29085891 -170544259 + AluSq SINE Alu 1 304 -9 227 242 62 39 chr5 29086142 29086270 -170543880 + L1M4 LINE L1 4231 4361 -1785 337 248 26 137 chr5 29086887 29087069 -170543081 - MLT1L LTR MaLR 0 615 463 2208 136 16 19 chr5 29087069 29087445 -170542705 + THE1C LTR MaLR 1 375 0 337 248 26 137 chr5 29087445 29087496 -170542654 - MLT1L LTR MaLR -152 463 408 24 77 0 0 chr5 29088490 29088542 -170541608 + AT_rich Low_complexity Low_complexity 1 52 0 5060 251 63 69 chr5 29088580 29091024 -170539126 - ERVL-C1 LTR ERVL -1957 3807 1259 1986 192 14 57 chr5 29091071 29091509 -170538641 - MSTB1 LTR MaLR -13 419 1 1327 292 73 29 chr5 29091511 29091824 -170538326 - ERVL-C1 LTR ERVL -4551 1213 915 1729 144 60 41 chr5 29091824 29092192 -170537958 + THE1C LTR MaLR 1 375 0 1327 292 73 29 chr5 29092192 29092670 -170537480 - ERVL-C1 LTR ERVL -4849 915 294 1708 160 9 47 chr5 29092670 29092989 -170537161 + AluJb SINE Alu 1 307 -5 1327 292 73 29 chr5 29092989 29093204 -170536946 - ERVL-C1 LTR ERVL -5470 294 90 1793 124 3 57 chr5 29093273 29093587 -170536563 + AluSc SINE Alu 1 297 -12 282 29 0 0 chr5 29093589 29093624 -170536526 + (CA)n Simple_repeat Simple_repeat 2 36 0 897 270 70 39 chr5 29093647 29094032 -170536118 - MLT2C1 LTR ERVL 0 397 1 203 365 35 17 chr5 29094104 29094219 -170535931 - L2 LINE L2 -521 2793 2677 238 334 86 52 chr5 29094709 29094858 -170535292 - L2 LINE L2 -1264 2050 1908 1967 136 4 0 chr5 29094858 29095185 -170534965 + AluSg SINE Alu 1 328 0 238 334 86 52 chr5 29095185 29095441 -170534709 - L2 LINE L2 -1406 1908 1630 208 265 216 20 chr5 29095464 29095566 -170534584 + L2 LINE L2 3191 3312 -1 30 0 0 0 chr5 29095738 29095768 -170534382 + AT_rich Low_complexity Low_complexity 1 30 0 218 310 0 0 chr5 29096057 29096115 -170534035 + L2 LINE L2 3001 3058 -214 23 33 0 0 chr5 29097808 29097838 -170532312 + AT_rich Low_complexity Low_complexity 1 30 0 2320 88 3 0 chr5 29098440 29098737 -170531413 - AluSp SINE Alu -15 298 1 183 42 0 0 chr5 29098842 29098866 -170531284 + (T)n Simple_repeat Simple_repeat 1 24 0 2103 134 0 0 chr5 29099445 29099752 -170530398 + AluSg SINE Alu 1 307 -3 8422 218 66 43 chr5 29100068 29101868 -170528282 - L1MC3 LINE L1 0 9204 7447 1932 99 58 0 chr5 29101868 29102161 -170527989 - AluSg SINE Alu 0 310 1 8422 218 66 43 chr5 29102161 29102183 -170527967 - L1MC3 LINE L1 -1757 7447 7427 2384 67 0 3 chr5 29102183 29102483 -170527667 - AluY SINE Alu -12 299 1 8422 218 66 43 chr5 29102483 29103322 -170526828 - L1MC3 LINE L1 -1777 7427 6478 1686 200 91 28 chr5 29103322 29103783 -170526367 + LTR2B LTR ERV1 1 490 0 8422 218 66 43 chr5 29103783 29103875 -170526275 - L1MC3 LINE L1 -2726 6478 6390 5035 285 48 17 chr5 29103849 29106012 -170524138 - L1MC3 LINE L1 -1774 5791 3561 * 248 230 40 0 chr5 29106014 29106088 -170524062 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 701 283 74 36 chr5 29106110 29106686 -170523464 - L1MC3 LINE L1 -4263 3483 2802 629 252 92 56 chr5 29106723 29106973 -170523177 - L1MC3 LINE L1 -5255 1791 1533 500 297 48 0 chr5 29107251 29107416 -170522734 - MLT1F1 LTR MaLR -385 182 10 1493 215 32 24 chr5 29108136 29108375 -170521775 - L1MB8 LINE L1 -2 6176 5931 2135 112 0 3 chr5 29108375 29108670 -170521480 - AluSx SINE Alu -18 294 1 1493 215 32 24 chr5 29108670 29108806 -170521344 - L1MB8 LINE L1 -247 5931 5798 497 221 66 22 chr5 29108832 29109013 -170521137 - L1M4 LINE L1 -3782 3175 2987 * 4436 275 68 45 chr5 29109008 29109156 -170520994 - L1M4 LINE L1 -4550 2409 2266 1986 96 30 4 chr5 29109156 29109454 -170520696 - AluSg SINE Alu 0 308 4 4436 275 68 45 chr5 29109454 29109989 -170520161 - L1M4 LINE L1 -4693 2266 1745 2078 110 0 0 chr5 29109989 29110324 -170519826 - AluSc SINE Alu 0 335 1 4436 275 68 45 chr5 29110324 29111984 -170518166 - L1M4 LINE L1 -5214 1745 11 262 391 77 6 chr5 29112544 29112700 -170517450 - MIR3 SINE MIR -38 170 4 26 0 0 0 chr5 29113189 29113215 -170516935 + AT_rich Low_complexity Low_complexity 1 26 0 826 312 54 10 chr5 29113554 29113868 -170516282 - MER69 DNA AcHobo -2198 328 1 181 376 65 0 chr5 29114123 29114216 -170515934 + L2 LINE L2 2716 2814 -500 251 260 156 10 chr5 29114541 29114637 -170515513 + L2 LINE L2 3163 3272 0 7210 171 40 9 chr5 29114799 29116116 -170514034 - Tigger1 DNA MER2_type 0 2418 1061 3122 153 33 0 chr5 29118447 29118988 -170511162 - Tigger1 DNA MER2_type -1339 1079 521 356 135 11 56 chr5 29118989 29119078 -170511072 - L1PA16 LINE L1 -2 6164 6080 274 330 36 9 chr5 29119078 29119190 -170510960 + L2 LINE L2 3196 3310 -3 13014 203 44 8 chr5 29119211 29124373 -170505777 - L1PB1 LINE L1 -5 6862 1517 2096 143 39 22 chr5 29124373 29124572 -170505578 - THE1B LTR MaLR 0 364 155 2344 38 0 3 chr5 29124572 29124862 -170505288 - L1PA2 LINE L1 0 6155 5867 2096 143 39 22 chr5 29124862 29125020 -170505130 - THE1B LTR MaLR -209 155 1 9098 158 10 5 chr5 29125020 29126531 -170503619 - L1PB1 LINE L1 -5342 1521 3 2792 182 19 15 chr5 29126542 29127074 -170503076 - Tigger1 DNA MER2_type -1884 534 1 1350 194 70 65 chr5 29127259 29127646 -170502504 + MLT1B LTR MaLR 1 389 -1 27 81 0 0 chr5 29127741 29127803 -170502347 + AT_rich Low_complexity Low_complexity 1 62 0 230 207 96 111 chr5 29128467 29128738 -170501412 - L1M4 LINE L1 -1484 4662 4396 2287 166 60 66 chr5 29128942 29129309 -170500841 - L1MB2 LINE L1 -2 6169 5805 1978 133 0 10 chr5 29129309 29129637 -170500513 - AluSx SINE Alu 0 312 1 2287 166 60 66 chr5 29129637 29129848 -170500302 - L1MB2 LINE L1 -366 5805 5594 272 315 99 23 chr5 29129832 29130305 -170499845 - L1M4 LINE L1 -1822 4324 3816 * 971 296 32 20 chr5 29130494 29130937 -170499213 - L1M4 LINE L1 -1987 4159 3712 * 4185 208 40 18 chr5 29130932 29132756 -170497394 + L1MA9 LINE L1 4277 6150 -162 245 303 40 0 chr5 29133746 29133822 -170496328 + MLT2F LTR ERVL 157 235 -428 254 377 14 41 chr5 29133874 29134094 -170496056 + MLT2F LTR ERVL 241 454 -209 375 176 0 0 chr5 29134118 29134186 -170495964 - AluJ/FLAM SINE Alu -230 72 5 344 309 40 17 chr5 29134196 29134371 -170495779 + MLT2F LTR ERVL 463 641 -22 1975 177 26 31 chr5 29135054 29135511 -170494639 - L1MA8 LINE L1 -3 6288 5834 1248 229 50 37 chr5 29136335 29136794 -170493356 - LTR37B LTR ERV1 0 468 4 23 68 0 0 chr5 29137125 29137169 -170492981 + AT_rich Low_complexity Low_complexity 1 44 0 7327 124 82 109 chr5 29137733 29139479 -170490671 - pTR5 LTR ERV1 0 2438 741 2275 84 6 6 chr5 29139501 29139812 -170490338 + AluY SINE Alu 1 311 0 1189 246 44 33 chr5 29140399 29140760 -170489390 - MLT1A1 LTR MaLR 0 365 1 2083 144 0 0 chr5 29141013 29141326 -170488824 - AluSp SINE Alu 0 313 1 27 81 0 0 chr5 29141463 29141525 -170488625 + AT_rich Low_complexity Low_complexity 1 62 0 341 340 139 4 chr5 29142010 29142248 -170487902 + Charlie2 DNA MER1_type 46 315 -2467 4970 143 4 7 chr5 29142272 29143093 -170487057 + L1PA15 LINE L1 5346 6163 -2 333 268 177 26 chr5 29143219 29143618 -170486532 - L1ME3A LINE L1 -112 6058 5595 658 161 36 93 chr5 29143742 29143832 -170486318 + LTR38 LTR ERV1 1 76 -480 1898 150 0 3 chr5 29143832 29144125 -170486025 - AluSx SINE Alu -20 292 1 658 161 36 93 chr5 29144125 29144227 -170485923 + LTR38 LTR ERV1 76 182 -374 5213 176 23 28 chr5 29144227 29144822 -170485328 + L1PA16 LINE L1 4738 5335 -831 396 0 0 0 chr5 29144822 29144866 -170485284 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5213 176 23 28 chr5 29144866 29145707 -170484443 + L1PA16 LINE L1 5335 6157 -9 37 23 0 0 chr5 29145733 29145777 -170484373 + AT_rich Low_complexity Low_complexity 1 44 0 1801 181 64 13 chr5 29145798 29146174 -170483976 + LTR38 LTR ERV1 158 552 -4 23 33 0 0 chr5 29146206 29146236 -170483914 + AT_rich Low_complexity Low_complexity 1 30 0 259 138 15 15 chr5 29146238 29146303 -170483847 + (TATTG)n Simple_repeat Simple_repeat 1 65 0 304 158 0 0 chr5 29146488 29146545 -170483605 - L1MA4 LINE L1 0 6300 6244 * 469 156 46 37 chr5 29146519 29146628 -170483522 - L1M3f LINE L1 -5203 125 16 1672 208 0 0 chr5 29146677 29146989 -170483161 - AluJo SINE Alu 0 312 1 576 317 57 27 chr5 29147086 29147635 -170482515 - L1M4 LINE L1 -2238 3908 3344 1167 258 58 3 chr5 29148524 29148834 -170481316 - MER68 LTR ERV1 -9 553 227 393 172 35 23 chr5 29148833 29148920 -170481230 - LTR52 LTR ERVL -5 416 329 * 253 182 0 0 chr5 29148915 29148959 -170481191 - MER68 LTR ERV1 -467 95 52 * 517 261 30 0 chr5 29148958 29149092 -170481058 - MER77 LTR ERV1 -43 562 425 1179 162 0 5 chr5 29150280 29150471 -170479679 - AluSg/x SINE Alu -25 287 98 26 0 0 0 chr5 29151165 29151191 -170478959 + AT_rich Low_complexity Low_complexity 1 26 0 454 254 38 56 chr5 29151362 29151575 -170478575 + MER3 DNA MER1_type 1 209 0 339 281 175 31 chr5 29151626 29151786 -170478364 - MER5A DNA MER1_type 0 189 7 2307 110 0 0 chr5 29152023 29152333 -170477817 - AluSg SINE Alu 0 310 1 493 331 7 0 chr5 29152543 29152688 -170477462 + MIR SINE MIR 11 156 -106 21 0 0 0 chr5 29152757 29152778 -170477372 + AT_rich Low_complexity Low_complexity 1 21 0 355 269 10 19 chr5 29153131 29153235 -170476915 - MIR SINE MIR -56 206 104 727 303 35 45 chr5 29153244 29153706 -170476444 - L1M4 LINE L1 -1203 4943 4487 480 128 0 0 chr5 29154025 29154103 -170476047 - L1PA13 LINE L1 -4 6159 6082 401 91 0 0 chr5 29154107 29154162 -170475988 + L1PA13 LINE L1 6022 6076 -87 1555 250 15 11 chr5 29154626 29155300 -170474850 + MER21B LTR ERV1 19 750 -113 22 70 0 0 chr5 29155487 29155530 -170474620 + AT_rich Low_complexity Low_complexity 1 43 0 1329 269 78 47 chr5 29157769 29158319 -170471831 + MLT1E LTR MaLR 1 593 0 298 263 125 38 chr5 29158354 29158514 -170471636 + HERVL LTR ERVL 3165 3338 -2316 2823 189 41 8 chr5 29159040 29159535 -170470615 + MLT2B3 LTR ERVL 1 478 -76 600 53 21 11 chr5 29159535 29159629 -170470521 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 2823 189 41 8 chr5 29159629 29159640 -170470510 + MLT2B3 LTR ERVL 478 487 -67 1998 53 0 4 chr5 29159640 29159902 -170470248 - L1PA4 LINE L1 0 6155 5895 2823 189 41 8 chr5 29159902 29159929 -170470221 + MLT2B3 LTR ERVL 487 553 -1 266 336 9 28 chr5 29160544 29160651 -170469499 - MIR SINE MIR -156 106 2 381 248 21 57 chr5 29161178 29161319 -170468831 + MER77 LTR ERV1 60 195 -410 1015 256 62 100 chr5 29161350 29161881 -170468269 + MER77 LTR ERV1 140 601 -4 22 0 0 0 chr5 29164144 29164166 -170465984 + AT_rich Low_complexity Low_complexity 1 22 0 262 276 87 31 chr5 29164595 29164722 -170465428 - MLT1J2 LTR MaLR -33 417 284 27 0 0 0 chr5 29165563 29165590 -170464560 + AT_rich Low_complexity Low_complexity 1 27 0 205 152 0 0 chr5 29166408 29166441 -170463709 + (TG)n Simple_repeat Simple_repeat 2 34 0 2255 86 0 3 chr5 29167375 29167666 -170462484 + AluSc SINE Alu 8 297 -12 948 252 108 12 chr5 29167947 29168280 -170461870 - MLT1A1 LTR MaLR 0 365 1 931 287 175 5 chr5 29169007 29169425 -170460725 + L2 LINE L2 950 1438 -1876 423 291 89 55 chr5 29169803 29170433 -170459717 - L1MEc LINE L1 -4687 1709 1039 1898 141 0 28 chr5 29170433 29170753 -170459397 - AluY SINE Alu 0 311 1 423 291 89 55 chr5 29170753 29171014 -170459136 - L1MEc LINE L1 -5357 1039 788 206 279 13 13 chr5 29172308 29172387 -170457763 + CT-rich Low_complexity Low_complexity 2 80 0 23 0 0 0 chr5 29174533 29174556 -170455594 + AT_rich Low_complexity Low_complexity 1 23 0 2043 104 3 13 chr5 29175283 29175582 -170454568 + AluY SINE Alu 1 296 -15 2409 57 0 3 chr5 29176548 29176846 -170453304 + AluY SINE Alu 1 297 -14 1345 201 40 63 chr5 29178475 29178598 -170451552 + MLT1B LTR MaLR 1 125 -265 1845 146 0 0 chr5 29178598 29178879 -170451271 + AluSx SINE Alu 30 310 -2 1345 201 40 63 chr5 29178879 29179154 -170450996 + MLT1B LTR MaLR 125 390 0 2068 117 7 0 chr5 29179296 29179595 -170450555 - AluSx SINE Alu -11 301 1 21 36 0 0 chr5 29179849 29179877 -170450273 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 29179927 29179958 -170450192 + AT_rich Low_complexity Low_complexity 1 31 0 703 322 33 0 chr5 29180249 29180460 -170449690 + MIR SINE MIR 41 258 -4 246 160 0 0 chr5 29180823 29180873 -170449277 + CT-rich Low_complexity Low_complexity 1 50 0 220 221 15 29 chr5 29181815 29181883 -170448267 + A-rich Low_complexity Low_complexity 6 72 0 2383 148 22 36 chr5 29181891 29182336 -170447814 - MER65A LTR ERV1 -5 440 2 21 36 0 0 chr5 29182366 29182394 -170447756 + AT_rich Low_complexity Low_complexity 1 28 0 285 372 71 0 chr5 29182660 29182843 -170447307 - MIR SINE MIR -16 246 51 2497 66 0 0 chr5 29183395 29183698 -170446452 + AluY SINE Alu 1 303 -8 361 216 50 144 chr5 29183759 29183898 -170446252 - L2 LINE L2 -8 3305 3180 4216 204 42 15 chr5 29183936 29184241 -170445909 - MER54A LTR ERVL -2 899 604 2124 133 10 51 chr5 29184241 29184596 -170445554 - THE1C LTR MaLR 0 375 36 2043 144 3 0 chr5 29184596 29184901 -170445249 + AluSx SINE Alu 1 306 -6 2124 133 10 51 chr5 29184901 29184936 -170445214 - THE1C LTR MaLR -339 36 1 4216 204 42 15 chr5 29184936 29185484 -170444666 - MER54A LTR ERVL -297 604 23 2897 298 74 40 chr5 29185540 29186921 -170443229 - L2 LINE L2 -215 3098 1651 1652 205 18 12 chr5 29186924 29187266 -170442884 + MLT2D LTR ERVL 1 344 -70 1225 282 164 10 chr5 29187312 29187805 -170442345 - L2 LINE L2 -1815 1499 931 219 69 0 0 chr5 29189018 29189047 -170441103 + (TA)n Simple_repeat Simple_repeat 1 29 0 330 26 0 0 chr5 29189049 29189088 -170441062 + (CA)n Simple_repeat Simple_repeat 2 40 0 1543 179 17 30 chr5 29190983 29191280 -170438870 + AluJo SINE Alu 3 295 -17 423 352 86 25 chr5 29193479 29193906 -170436244 - L1ME4a LINE L1 -296 5825 5372 206 314 11 122 chr5 29195019 29195188 -170434962 - L2 LINE L2 -181 3091 2943 2536 120 3 8 chr5 29195188 29195554 -170434596 - THE1B LTR MaLR 0 364 1 206 314 11 122 chr5 29195554 29195572 -170434578 - L2 LINE L2 -329 2943 2925 321 238 0 12 chr5 29195671 29195755 -170434395 - L1MDa LINE L1 -3383 3157 3075 1589 244 20 0 chr5 29195851 29196207 -170433943 - MLT1A1 LTR MaLR -2 363 1 198 103 0 0 chr5 29196492 29196521 -170433629 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 319 260 13 110 chr5 29196561 29196715 -170433435 - L1MDa LINE L1 -5104 1436 1298 218 122 0 61 chr5 29197830 29197879 -170432271 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 324 0 0 0 chr5 29197889 29197925 -170432225 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 35954 34 113 3 chr5 29197925 29203435 -170426715 - L1PA2 LINE L1 -13 6142 7 942 171 38 86 chr5 29203440 29203732 -170426418 - MER33 DNA MER1_type -41 283 6 22 0 0 0 chr5 29204041 29204063 -170426087 + AT_rich Low_complexity Low_complexity 1 22 0 2427 150 7 41 chr5 29205131 29205592 -170424558 - MER65A LTR ERV1 0 445 1 231 297 22 11 chr5 29205768 29205859 -170424291 + CT-rich Low_complexity Low_complexity 6 97 0 2063 108 4 0 chr5 29207221 29207499 -170422651 + AluSp SINE Alu 35 313 0 211 284 67 20 chr5 29207524 29207623 -170422527 + MIR SINE MIR 34 144 -64 28 29 0 0 chr5 29208597 29208632 -170421518 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 29210204 29210229 -170419921 + AT_rich Low_complexity Low_complexity 1 25 0 207 205 0 0 chr5 29212133 29212172 -170417978 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 32 62 0 0 chr5 29215595 29215643 -170414507 + GC_rich Low_complexity Low_complexity 1 48 0 24 0 0 0 chr5 29217615 29217639 -170412511 + GC_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr5 29218960 29218985 -170411165 + AT_rich Low_complexity Low_complexity 1 25 0 305 240 188 52 chr5 29219062 29219312 -170410838 + L1 LINE L1 3092 3375 -2771 234 223 29 50 chr5 29219868 29220007 -170410143 + (CACAA)n Simple_repeat Simple_repeat 4 139 0 205 336 23 8 chr5 29220061 29220192 -170409958 + (CATA)n Simple_repeat Simple_repeat 2 134 0 528 361 90 17 chr5 29221362 29221839 -170408311 + HAL1 LINE L1 211 722 -1785 301 337 63 11 chr5 29221929 29222104 -170408046 + HAL1 LINE L1 1295 1478 -1029 459 313 24 37 chr5 29222112 29222358 -170407792 + HAL1 LINE L1 1451 1693 -814 2901 160 32 6 chr5 29222403 29222933 -170407217 - L1MA4 LINE L1 -57 6243 5700 573 220 145 66 chr5 29222933 29223160 -170406990 + MLT2B1 LTR ERVL 11 255 -265 5175 225 114 34 chr5 29223211 29224681 -170405469 + MER52A LTR ERV1 214 1755 0 671 219 16 0 chr5 29224681 29224809 -170405341 + MLT2B1 LTR ERVL 328 457 -63 393 75 0 0 chr5 29224843 29224896 -170405254 + (CA)n Simple_repeat Simple_repeat 2 54 0 2224 173 16 42 chr5 29224906 29225403 -170404747 - LTR22B LTR ERVK -4 488 5 248 182 0 0 chr5 29225421 29225465 -170404685 + MLT2D LTR ERVL 369 412 -2 877 298 85 39 chr5 29225472 29226188 -170403962 + HAL1 LINE L1 1752 2500 -7 1483 129 0 5 chr5 29227253 29227477 -170402673 + LOR1b LTR ERV1 1 223 -238 702 187 0 43 chr5 29227517 29227656 -170402494 - FLAM_C SINE Alu 0 133 1 196 220 100 0 chr5 29227714 29227764 -170402386 - MIR SINE MIR -88 174 120 750 171 54 93 chr5 29227782 29228040 -170402110 + LTR56 LTR ERV1 1 248 -197 690 256 64 8 chr5 29228057 29228291 -170401859 + LTR56 LTR ERV1 199 445 0 902 251 146 69 chr5 29228610 29229208 -170400942 + LTR48B LTR ERV1 1 644 0 23 54 0 0 chr5 29229934 29229971 -170400179 + AT_rich Low_complexity Low_complexity 1 37 0 2345 114 27 11 chr5 29230074 29230443 -170399707 + THE1C LTR MaLR 1 375 0 9459 122 40 40 chr5 29230443 29232024 -170398126 + THE1C-int LTR MaLR 1 1580 0 2314 147 0 18 chr5 29232024 29232406 -170397744 + THE1C LTR MaLR 1 375 0 1433 221 51 39 chr5 29232486 29232875 -170397275 - MSTD LTR MaLR 0 396 3 378 175 26 13 chr5 29233338 29233430 -170396720 - MSTC LTR MaLR -2 411 301 318 50 0 0 chr5 29233440 29233480 -170396670 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr5 29233865 29233886 -170396264 + AT_rich Low_complexity Low_complexity 1 21 0 402 336 15 7 chr5 29234259 29234438 -170395712 + MLT1G1 LTR MaLR 248 356 -186 258 173 0 19 chr5 29234506 29234558 -170395592 + MLT1G1 LTR MaLR 490 540 -2 197 317 78 54 chr5 29234710 29234877 -170395273 + MIR SINE MIR 90 260 -2 413 181 0 0 chr5 29234985 29235057 -170395093 - Tigger1 DNA MER2_type 0 2418 2347 2227 249 62 25 chr5 29235063 29235757 -170394393 + MER50 LTR ERV1 8 727 -7 11952 147 55 38 chr5 29235765 29237552 -170392598 - Tigger1 DNA MER2_type -71 2347 511 1854 172 24 0 chr5 29237552 29237849 -170392301 - AluSx SINE Alu -8 304 1 11952 147 55 38 chr5 29237849 29238364 -170391786 - Tigger1 DNA MER2_type -1907 511 6 2073 219 29 34 chr5 29289769 29290350 -170339800 + L1MB7 LINE L1 5606 6183 -1 308 379 44 20 chr5 29290634 29290882 -170339268 - MIR SINE MIR -8 254 1 24 32 0 0 chr5 29290957 29290988 -170339162 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr5 29291817 29291845 -170338305 + AT_rich Low_complexity Low_complexity 1 28 0 290 259 17 92 chr5 29291878 29292052 -170338098 - L1ME LINE L1 -449 5672 5512 227 317 24 12 chr5 29292264 29292346 -170337804 + MIR SINE MIR 2 84 -178 272 48 24 0 chr5 29293107 29293149 -170337001 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 1339 134 10 14 chr5 29293175 29293384 -170336766 - AluSx SINE Alu -73 239 32 346 86 69 0 chr5 29293400 29293458 -170336692 - AluS SINE Alu -201 102 41 874 307 162 21 chr5 29294002 29294753 -170335397 + L2 LINE L2 2374 3234 -79 24 0 0 0 chr5 29294763 29294787 -170335363 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 29295117 29295139 -170335011 + AT_rich Low_complexity Low_complexity 1 22 0 271 353 0 0 chr5 29295164 29295266 -170334884 - MLT1I LTR MaLR -7 402 301 453 103 0 0 chr5 29295370 29295438 -170334712 + (ATTAG)n Simple_repeat Simple_repeat 3 70 0 23 33 0 0 chr5 29295461 29295491 -170334659 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 29296246 29296269 -170333881 + AT_rich Low_complexity Low_complexity 1 23 0 6031 140 15 0 chr5 29296269 29297876 -170332274 - L1PA11 LINE L1 -23 6151 4522 8320 181 8 3 chr5 29297880 29299489 -170330661 + L1PA11 LINE L1 2892 4508 -1638 212 0 36 0 chr5 29299490 29299518 -170330632 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 234 105 0 0 chr5 29300711 29300749 -170329401 + (CAA)n Simple_repeat Simple_repeat 2 39 0 347 320 75 62 chr5 29301134 29301506 -170328644 + L2 LINE L2 2055 2431 -883 364 266 92 43 chr5 29302198 29302405 -170327745 - HAL1b LINE L1 -1008 340 124 28 48 0 0 chr5 29302410 29302452 -170327698 + AT_rich Low_complexity Low_complexity 1 42 0 192 307 27 27 chr5 29302635 29302710 -170327440 - L2 LINE L2 -1263 2051 1977 778 167 34 6 chr5 29302976 29303207 -170326943 + Tigger2 DNA MER2_type 2442 2717 -1 203 252 155 10 chr5 29303507 29303610 -170326540 + L3 LINE CR1 588 705 -872 2320 235 16 29 chr5 29303737 29304354 -170325796 + L1MB7 LINE L1 5479 6087 -97 303 185 0 15 chr5 29304422 29304487 -170325663 + L1MB8 LINE L1 6106 6169 -9 482 199 46 53 chr5 29304594 29304725 -170325425 + L1MEc LINE L1 462 591 -5454 44 0 0 0 chr5 29304770 29304814 -170325336 + AT_rich Low_complexity Low_complexity 1 44 0 2923 281 40 18 chr5 29305563 29306976 -170323174 + L1MCc LINE L1 1 1798 -4851 797 227 138 44 chr5 29306988 29307708 -170322442 + L1MCc LINE L1 1844 2717 -4224 2653 200 52 2 chr5 29307708 29308227 -170321923 + MER44D DNA MER2_type 1 600 -5 389 231 111 13 chr5 29308246 29308554 -170321596 + L1MCc LINE L1 2752 3131 -3961 1245 214 49 30 chr5 29308561 29308865 -170321285 + MLT2D LTR ERVL 1 310 -104 585 204 0 0 chr5 29308892 29309039 -170321111 + (TA)n Simple_repeat Simple_repeat 1 147 0 1174 291 30 11 chr5 29309208 29309683 -170320467 + L1MCc LINE L1 3130 3613 -3328 24 91 0 0 chr5 29310084 29310150 -170320000 + AT_rich Low_complexity Low_complexity 1 66 0 35 63 0 0 chr5 29310220 29310283 -170319867 + AT_rich Low_complexity Low_complexity 1 63 0 2359 62 3 0 chr5 29311388 29311692 -170318458 - AluY SINE Alu -6 305 1 287 250 54 45 chr5 29311940 29312052 -170318098 + MIR SINE MIR 24 136 -126 311 256 110 54 chr5 29312393 29312729 -170317421 + L1ME3 LINE L1 5625 5979 -183 369 261 76 78 chr5 29312885 29313216 -170316934 + L1MEc LINE L1 1302 1605 -4959 22 0 0 0 chr5 29313279 29313301 -170316849 + AT_rich Low_complexity Low_complexity 1 22 0 369 247 130 55 chr5 29313568 29314180 -170315970 + L1MEc LINE L1 2381 2995 -3569 25 0 0 0 chr5 29314216 29314241 -170315909 + AT_rich Low_complexity Low_complexity 1 25 0 1979 148 0 0 chr5 29314806 29315110 -170315040 + AluSx SINE Alu 1 304 -8 24 67 0 0 chr5 29315727 29315772 -170314378 + AT_rich Low_complexity Low_complexity 1 45 0 234 309 46 18 chr5 29315790 29316007 -170314143 + L1MEc LINE L1 4136 4358 -2206 12203 108 20 26 chr5 29316007 29318290 -170311860 + MER41B-int LTR ERV1 2994 5945 -1 3144 110 90 0 chr5 29318291 29318791 -170311359 + MER41B LTR ERV1 3 547 -88 376 238 29 29 chr5 29318882 29318987 -170311163 + L1MEc LINE L1 4438 4542 -2022 452 288 161 13 chr5 29319089 29319461 -170310689 + L1MEc LINE L1 4983 5409 -1155 1304 245 69 58 chr5 29321464 29322211 -170307939 - L1ME1 LINE L1 -163 6397 5589 798 279 60 17 chr5 29322311 29322862 -170307288 - L1ME1 LINE L1 -3718 2822 2249 1953 143 3 13 chr5 29324622 29324937 -170305213 + AluSx SINE Alu 1 312 0 200 196 0 18 chr5 29326207 29326263 -170303887 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2675 170 11 5 chr5 29326445 29326881 -170303269 - Tigger2 DNA MER2_type 0 2718 2280 304 201 18 0 chr5 29326881 29326950 -170303200 - Tigger2 DNA MER2_type -2656 62 1 29 90 0 0 chr5 29327198 29327276 -170302874 + AT_rich Low_complexity Low_complexity 1 78 0 2382 68 0 0 chr5 29327292 29327587 -170302563 + AluY SINE Alu 1 295 -16 1573 183 62 32 chr5 29328172 29328510 -170301640 + MER7A DNA MER2_type 1 346 0 253 276 0 82 chr5 29328563 29328661 -170301489 + L1ME3 LINE L1 5477 5566 -600 1567 230 28 19 chr5 29328679 29329143 -170301007 - L1MA9 LINE L1 -37 6275 5817 2011 95 0 37 chr5 29329143 29329439 -170300711 - AluSg SINE Alu -12 298 14 1567 230 28 19 chr5 29329439 29330025 -170300125 - L1MA9 LINE L1 -495 5817 5104 219 170 21 0 chr5 29330654 29330701 -170299449 + (CA)n Simple_repeat Simple_repeat 1 48 0 1191 170 9 22 chr5 29331933 29332156 -170297994 - MSTA LTR MaLR -2 426 207 1032 231 23 11 chr5 29332154 29332414 -170297736 - MSTB LTR MaLR -163 263 1 * 2423 119 6 6 chr5 29332632 29332994 -170297156 - THE1B LTR MaLR -2 362 1 784 341 54 20 chr5 29333240 29333779 -170296371 + L1MCc LINE L1 -490 66 -5842 848 289 97 49 chr5 29333898 29334528 -170295622 + L1MCc LINE L1 293 952 -4956 260 248 115 0 chr5 29334633 29334746 -170295404 + L1MCc LINE L1 1201 1326 -5100 39 60 0 0 chr5 29334834 29334901 -170295249 + AT_rich Low_complexity Low_complexity 1 67 0 361 279 66 37 chr5 29334957 29335249 -170294901 + L1MCc LINE L1 1421 1932 -4675 1304 211 25 18 chr5 29335538 29335818 -170294332 + AluJo SINE Alu 1 282 -30 290 272 44 80 chr5 29335967 29336217 -170293933 - L1MC/D LINE L1 -2148 5660 5420 22 35 0 0 chr5 29336556 29336585 -170293565 + AT_rich Low_complexity Low_complexity 1 29 0 1070 228 49 26 chr5 29336628 29336935 -170293215 + L1ME3 LINE L1 5625 5938 -224 432 261 14 19 chr5 29336944 29337113 -170293037 + L1MA10 LINE L1 5988 6316 -18 216 97 0 0 chr5 29338752 29338783 -170291367 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 2184 81 40 0 chr5 29339024 29339320 -170290830 - AluY SINE Alu -3 308 1 310 317 10 0 chr5 29339436 29339540 -170290610 + (TATG)n Simple_repeat Simple_repeat 3 107 0 29 0 0 0 chr5 29339639 29339668 -170290482 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr5 29339685 29339711 -170290439 + (TTATA)n Simple_repeat Simple_repeat 4 29 0 27 49 0 0 chr5 29340455 29340496 -170289654 + AT_rich Low_complexity Low_complexity 1 41 0 296 185 64 19 chr5 29341179 29341336 -170288814 + (TA)n Simple_repeat Simple_repeat 2 165 0 1807 189 14 3 chr5 29341383 29341727 -170288423 + MER7A DNA MER2_type 1 346 0 271 338 28 21 chr5 29342388 29342530 -170287620 + MER5A DNA MER1_type 9 151 -38 2153 112 0 0 chr5 29342682 29342976 -170287174 - AluSg1 SINE Alu -15 294 1 1219 244 60 55 chr5 29343011 29343413 -170286737 - MER92A LTR ERV1 -8 404 1 30 27 0 0 chr5 29343460 29343497 -170286653 + AT_rich Low_complexity Low_complexity 1 37 0 897 239 34 10 chr5 29343676 29343881 -170286269 - MLT1H LTR MaLR -274 275 66 2868 155 39 109 chr5 29345974 29346646 -170283504 + MER51A LTR ERV1 1 625 -9 309 350 120 39 chr5 29346745 29347128 -170283022 + L2 LINE L2 2900 3313 0 2066 109 169 11 chr5 29347266 29347634 -170282516 + MSTA LTR MaLR 3 428 0 1955 219 23 10 chr5 29347895 29348374 -170281776 + MER31A LTR ERV1 1 485 0 22 0 0 0 chr5 29348388 29348410 -170281740 + AT_rich Low_complexity Low_complexity 1 22 0 226 282 13 13 chr5 29349298 29349376 -170280774 + MIR SINE MIR 66 143 -119 299 295 74 9 chr5 29349466 29349683 -170280467 + L1M4 LINE L1 4116 4346 -1800 23 0 0 0 chr5 29349834 29349857 -170280293 + AT_rich Low_complexity Low_complexity 1 23 0 375 183 78 26 chr5 29349873 29349988 -170280162 + L1M4 LINE L1 4598 4718 -1428 613 337 42 29 chr5 29351410 29351787 -170278363 + HERV16 LTR ERVL 2116 2497 -2499 22 70 0 0 chr5 29352839 29352882 -170277268 + AT_rich Low_complexity Low_complexity 1 43 0 716 206 67 75 chr5 29353393 29353761 -170276389 + LTR21B LTR ERV1 28 438 0 9168 210 31 34 chr5 29353761 29357884 -170272266 + HERVFH21 LTR ERV1 1 3970 -2559 2952 294 27 41 chr5 29358020 29359436 -170270714 + HERVFH21 LTR ERV1 5354 6529 0 621 214 78 48 chr5 29359455 29359814 -170270336 + LTR21B LTR ERV1 28 438 0 2852 13 0 0 chr5 29359923 29360241 -170269909 + AluYb8 SINE Alu 1 318 0 2982 278 104 48 chr5 29360653 29361475 -170268675 + L1MB7 LINE L1 15 790 -5856 297 68 0 0 chr5 29361475 29361519 -170268631 + (CA)n Simple_repeat Simple_repeat 1 44 0 2982 278 104 48 chr5 29361519 29362654 -170267496 + L1MB7 LINE L1 790 2096 -4550 1194 245 46 14 chr5 29362682 29363071 -170267079 - L1MB5 LINE L1 -8 6166 5764 3839 263 46 46 chr5 29363257 29365150 -170265000 + L1MB7 LINE L1 2536 4426 -2218 2337 101 0 0 chr5 29365150 29365457 -170264693 - AluSx SINE Alu -5 307 1 3839 263 46 46 chr5 29365457 29365674 -170264476 + L1MB7 LINE L1 4426 4642 -2002 773 274 68 3 chr5 29365676 29365968 -170264182 + L1MB7 LINE L1 5367 5677 -967 9523 208 78 7 chr5 29365971 29368984 -170261166 + L1M1 LINE L1 24 2666 -4899 2237 141 8 19 chr5 29368984 29369360 -170260790 + THE1C LTR MaLR 1 372 -3 9523 208 78 7 chr5 29369360 29369514 -170260636 + L1M1 LINE L1 2666 2808 -4757 3752 236 41 54 chr5 29369518 29372419 -170257731 + L1MA6 LINE L1 2097 4813 -2752 7074 185 41 12 chr5 29372422 29374962 -170255188 + L1MA6 LINE L1 5100 7707 -12 435 190 28 45 chr5 29374962 29375141 -170255009 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 3339 230 48 9 chr5 29375149 29376103 -170254047 + L1MB7 LINE L1 5686 6674 -8 868 245 21 0 chr5 29376279 29376467 -170253683 - MLT1A1 LTR MaLR 0 365 174 392 176 0 27 chr5 29376475 29376549 -170253601 - MLT1A1 LTR MaLR -356 72 1 27 0 0 0 chr5 29377245 29377272 -170252878 + AT_rich Low_complexity Low_complexity 1 27 0 2077 114 6 9 chr5 29377306 29377630 -170252520 - L1MA2 LINE L1 0 6304 5982 230 246 16 0 chr5 29379063 29379124 -170251026 + (TG)n Simple_repeat Simple_repeat 1 62 0 2626 241 18 7 chr5 29379244 29379924 -170250226 + L1MB1 LINE L1 4406 5092 -1054 1566 188 33 11 chr5 29379940 29380308 -170249842 + L1MB1 LINE L1 5791 6166 -2 262 156 65 13 chr5 29380598 29380675 -170249475 + Charlie6 DNA MER1_type 2806 2886 -614 2624 188 11 6 chr5 29380941 29381409 -170248741 - MER70A LTR ERVL 0 472 3 2171 121 0 3 chr5 29381757 29382055 -170248095 - AluSg SINE Alu -5 305 9 736 203 14 0 chr5 29383156 29383299 -170246851 - AluSg/x SINE Alu -13 299 155 273 196 0 0 chr5 29383636 29383692 -170246458 + (TA)n Simple_repeat Simple_repeat 1 56 0 2822 170 20 7 chr5 29383853 29384394 -170245756 + L1MA4 LINE L1 5742 6289 -11 265 299 21 21 chr5 29385529 29385626 -170244524 + MER69 DNA AcHobo 48 144 -1082 398 200 80 0 chr5 29386422 29386522 -170243628 - MLT1H LTR MaLR -3 546 439 275 279 217 0 chr5 29386642 29386771 -170243379 - MLT1H1 LTR MaLR -341 214 58 * 398 256 60 0 chr5 29386743 29386860 -170243290 - MLT1H LTR MaLR -421 128 5 1153 250 21 62 chr5 29386929 29387317 -170242833 + MLT1A2 LTR MaLR 1 372 -2 286 0 91 0 chr5 29387526 29387570 -170242580 + T-rich Low_complexity Low_complexity 4 51 0 1827 152 0 3 chr5 29387581 29387871 -170242279 - AluSx SINE Alu -23 289 1 1702 222 41 3 chr5 29387966 29388387 -170241763 - L1MB7 LINE L1 0 6184 5745 246 275 0 25 chr5 29388379 29388403 -170241747 - L1MA10 LINE L1 -77 6257 6234 * 497 239 46 95 chr5 29388403 29388666 -170241484 - L1ME1 LINE L1 -92 6074 5825 28 95 0 0 chr5 29388666 29388750 -170241400 + AT_rich Low_complexity Low_complexity 1 84 0 335 169 16 12 chr5 29388758 29388845 -170241305 - L1ME1 LINE L1 -354 5812 5724 1281 258 33 10 chr5 29389016 29389411 -170240739 + L1ME1 LINE L1 5747 6150 -16 320 298 60 13 chr5 29389426 29389661 -170240489 + L1M4 LINE L1 4314 4559 -1587 33 56 0 0 chr5 29389712 29389766 -170240384 + AT_rich Low_complexity Low_complexity 1 54 0 995 176 87 128 chr5 29390221 29390353 -170239797 + AluJo SINE Alu 4 140 -162 1937 139 0 16 chr5 29390353 29390663 -170239487 + AluSq SINE Alu 9 313 0 995 176 87 128 chr5 29390663 29390677 -170239473 + AluJo SINE Alu 140 153 -149 195 69 0 0 chr5 29390677 29390706 -170239444 + (CCAA)n Simple_repeat Simple_repeat 4 32 0 995 176 87 128 chr5 29390706 29390870 -170239280 + AluJo SINE Alu 153 302 0 28 48 0 0 chr5 29391474 29391516 -170238634 + AT_rich Low_complexity Low_complexity 1 42 0 433 250 8 53 chr5 29391558 29391802 -170238348 - L1MC5 LINE L1 -124 7837 7605 379 341 89 20 chr5 29392000 29392393 -170237757 + L1MEd LINE L1 786 1205 -5000 1465 183 61 4 chr5 29392433 29392712 -170237438 + AluJb SINE Alu 7 301 -11 1955 70 60 7 chr5 29392825 29393109 -170237041 + AluY SINE Alu 1 299 -12 313 338 27 0 chr5 29393291 29393439 -170236711 + L1MEd LINE L1 1544 1695 -4701 434 333 36 28 chr5 29393757 29394087 -170236063 + L1MEd LINE L1 2167 2458 -3757 1987 117 3 3 chr5 29394437 29394736 -170235414 + AluSc SINE Alu 1 299 -10 180 0 0 0 chr5 29394789 29394809 -170235341 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 636 272 103 57 chr5 29395067 29396001 -170234149 + L1M4 LINE L1 3871 4847 -1299 808 226 36 5 chr5 29396272 29396467 -170233683 - MER20 DNA MER1_type -18 201 1 266 106 0 43 chr5 29396849 29396896 -170233254 + L1ME3A LINE L1 5907 5951 -211 240 281 50 66 chr5 29396956 29397077 -170233073 + L1ME3A LINE L1 5962 6080 -90 227 241 30 83 chr5 29397136 29397269 -170232881 - L1ME4a LINE L1 -57 6064 5939 339 167 21 10 chr5 29397543 29397639 -170232511 + (TA)n Simple_repeat Simple_repeat 2 98 0 25 75 0 0 chr5 29397672 29397725 -170232425 + AT_rich Low_complexity Low_complexity 1 53 0 22 70 0 0 chr5 29398082 29398125 -170232025 + AT_rich Low_complexity Low_complexity 1 43 0 443 254 127 8 chr5 29398749 29398875 -170231275 + Tigger7 DNA MER2_type 20 160 -545 523 147 83 18 chr5 29398894 29399003 -170231147 + Tigger7 DNA MER2_type 2209 2324 -163 654 162 136 13 chr5 29399268 29399422 -170230728 + Tigger7 DNA MER2_type 2413 2585 -2 21 36 0 0 chr5 29400621 29400649 -170229501 + AT_rich Low_complexity Low_complexity 1 28 0 1187 227 30 57 chr5 29400742 29401108 -170229042 + MLT1A1 LTR MaLR 10 365 0 2198 238 72 27 chr5 29401108 29401865 -170228285 + MLT1A1-int LTR MaLR 1 883 -488 2059 188 22 20 chr5 29402215 29402624 -170227526 + MLT1A1-int LTR MaLR 1326 1735 0 1249 220 38 59 chr5 29402624 29402681 -170227469 + MLT1A1 LTR MaLR 1 58 -307 2352 43 4 0 chr5 29402681 29402960 -170227190 - AluYb8 SINE Alu 0 318 39 1249 220 38 59 chr5 29402960 29403275 -170226875 + MLT1A1 LTR MaLR 58 365 0 596 206 73 0 chr5 29403514 29403679 -170226471 - L1MA7 LINE L1 -3 6288 6112 * 785 190 25 50 chr5 29403669 29403869 -170226281 + L1MA7 LINE L1 5931 6125 -166 776 240 17 0 chr5 29405498 29405673 -170224477 + MSTD LTR MaLR 219 396 0 1309 152 33 84 chr5 29405688 29406023 -170224127 - L1PB4 LINE L1 -301 5855 5538 * 2494 192 11 51 chr5 29406016 29406870 -170223280 + L1PB4 LINE L1 4731 5543 -613 2418 114 11 19 chr5 29407285 29407663 -170222487 + THE1C LTR MaLR 1 375 0 4384 203 72 13 chr5 29407673 29407798 -170222352 - L1PB4 LINE L1 -725 5429 5313 234 0 0 0 chr5 29407798 29407824 -170222326 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4384 203 72 13 chr5 29407824 29408693 -170221457 - L1PB4 LINE L1 -841 5313 4369 198 0 0 0 chr5 29408693 29408715 -170221435 + (TG)n Simple_repeat Simple_repeat 1 22 0 4384 203 72 13 chr5 29408715 29408912 -170221238 - L1PB4 LINE L1 -1785 4369 4185 21 0 0 0 chr5 29408939 29408960 -170221190 + AT_rich Low_complexity Low_complexity 1 21 0 246 302 66 50 chr5 29409457 29409639 -170220511 - L2 LINE L2 -2 3311 3127 541 320 189 36 chr5 29409784 29410341 -170219809 - L2 LINE L2 -437 2877 2236 236 196 0 36 chr5 29410367 29410423 -170219727 + L1P4 LINE L1 5519 5572 -602 230 149 0 0 chr5 29410988 29411035 -170219115 - LTR66 LTR ERVL -170 440 394 390 380 10 10 chr5 29411049 29411257 -170218893 + L1ME3 LINE L1 5683 5890 -272 2150 94 3 3 chr5 29411271 29411558 -170218592 - AluSq SINE Alu -22 291 5 1733 122 107 4 chr5 29412021 29412292 -170217858 - AluSq SINE Alu -14 299 1 2057 125 0 51 chr5 29412292 29412645 -170217505 - L1PA13 LINE L1 -4 6159 5825 1850 133 27 10 chr5 29412743 29413044 -170217106 + AluSx SINE Alu 1 306 -6 314 300 50 25 chr5 29413513 29413633 -170216517 - L2 LINE L2 -219 3053 2931 1513 160 219 17 chr5 29413726 29414082 -170216068 + MSTA LTR MaLR 1 428 0 42 36 0 0 chr5 29414538 29414594 -170215556 + AT_rich Low_complexity Low_complexity 1 56 0 339 320 141 30 chr5 29414596 29414830 -170215320 - MIR SINE MIR 0 262 3 902 329 69 27 chr5 29414873 29415622 -170214528 - L2 LINE L2 -18 3295 2433 307 257 6 18 chr5 29419787 29419899 -170210251 + L1ME LINE L1 5725 5832 -338 245 50 0 25 chr5 29419950 29419990 -170210160 + (TA)n Simple_repeat Simple_repeat 2 40 0 204 154 46 15 chr5 29420160 29420225 -170209925 + (TTATA)n Simple_repeat Simple_repeat 2 68 0 257 254 45 0 chr5 29420531 29420598 -170209552 - L1ME3A LINE L1 -17 6153 6084 300 186 0 0 chr5 29420690 29420749 -170209401 + (TG)n Simple_repeat Simple_repeat 1 59 0 247 250 0 0 chr5 29420790 29420846 -170209304 + (TG)n Simple_repeat Simple_repeat 1 56 0 687 271 142 57 chr5 29420850 29421377 -170208773 - L1ME3A LINE L1 -282 5888 5317 342 280 82 24 chr5 29421841 29422048 -170208102 - L1ME3A LINE L1 -1481 4665 4447 449 325 124 43 chr5 29422096 29422251 -170207899 - L1ME3A LINE L1 -1777 4369 4228 2866 6 0 6 chr5 29422251 29422571 -170207579 - AluYb8 SINE Alu 0 318 1 449 325 124 43 chr5 29422571 29423043 -170207107 - L1ME3A LINE L1 -1918 4228 3691 25 0 0 0 chr5 29424086 29424111 -170206039 + AT_rich Low_complexity Low_complexity 1 25 0 350 280 40 0 chr5 29424810 29424910 -170205240 - MIR SINE MIR -29 233 130 2369 103 0 0 chr5 29425329 29425664 -170204486 - AluSx SINE Alu 0 335 1 700 267 82 54 chr5 29425772 29426170 -170203980 - L1ME LINE L1 -397 5765 5336 290 261 93 40 chr5 29426313 29426539 -170203611 - L1ME LINE L1 -943 5203 4966 2371 97 7 0 chr5 29426556 29426866 -170203284 - AluSx SINE Alu 0 312 1 23 54 0 0 chr5 29427660 29427697 -170202453 + AT_rich Low_complexity Low_complexity 1 37 0 2353 48 0 83 chr5 29427697 29428033 -170202117 - AluY SINE Alu -3 308 1 56 42 0 11 chr5 29428135 29428159 -170201991 + AT_rich Low_complexity Low_complexity 1 24 -70 1961 159 0 10 chr5 29428159 29428468 -170201682 + AluSx SINE Alu 1 306 -6 56 42 0 11 chr5 29428468 29428538 -170201612 + AT_rich Low_complexity Low_complexity 24 94 0 1792 138 34 20 chr5 29429425 29429723 -170200427 + AluSq SINE Alu 1 302 -11 1222 211 40 115 chr5 29430718 29430936 -170199214 + MLT1D LTR MaLR 12 245 -260 2559 44 0 25 chr5 29430936 29431255 -170198895 + AluY SINE Alu 1 311 0 1222 211 40 115 chr5 29431255 29431566 -170198584 + MLT1D LTR MaLR 245 501 -4 1435 180 93 85 chr5 29434071 29434286 -170195864 - MLT1C LTR MaLR -3 464 252 207 0 0 0 chr5 29434286 29434309 -170195841 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1977 136 0 4 chr5 29434312 29434592 -170195558 - AluSg SINE Alu -31 279 1 1435 180 93 85 chr5 29434592 29434691 -170195459 - MLT1C LTR MaLR -216 251 154 2043 181 36 59 chr5 29434691 29435217 -170194933 - MER67D LTR ERV1 0 514 1 1435 180 93 85 chr5 29435217 29435357 -170194793 - MLT1C LTR MaLR -313 154 1 1475 187 7 49 chr5 29435838 29436143 -170194007 + AluJo SINE Alu 1 292 -20 21 0 0 0 chr5 29436675 29436696 -170193454 + AT_rich Low_complexity Low_complexity 1 21 0 3243 61 42 9 chr5 29437464 29437510 -170192640 - MLT2A1 LTR ERVL 0 444 401 252 0 0 0 chr5 29437510 29437538 -170192612 + (TA)n Simple_repeat Simple_repeat 2 29 0 3243 61 42 9 chr5 29437538 29437919 -170192231 - MLT2A1 LTR ERVL -43 401 3 254 361 162 0 chr5 29437921 29438112 -170192038 - MIR SINE MIR 0 262 41 2126 90 50 10 chr5 29438720 29439020 -170191130 + AluSq SINE Alu 1 312 -1 2711 156 67 27 chr5 29439208 29439772 -170190378 - L1MB1 LINE L1 -14 6175 5589 22 56 0 0 chr5 29440454 29440490 -170189660 + AT_rich Low_complexity Low_complexity 1 36 0 1422 184 26 48 chr5 29441161 29441470 -170188680 + AluJo SINE Alu 1 302 0 206 192 19 0 chr5 29441517 29441569 -170188581 + (TG)n Simple_repeat Simple_repeat 2 54 0 28 48 0 0 chr5 29441799 29441841 -170188309 + AT_rich Low_complexity Low_complexity 1 42 0 1973 175 39 24 chr5 29441986 29442368 -170187782 + MER61D LTR ERV1 114 501 0 16225 197 23 31 chr5 29443254 29447390 -170182760 + L1PA15-16 LINE L1 5 4121 -2728 281 116 14 87 chr5 29447383 29447452 -170182698 + L1PA13 LINE L1 6102 6165 -1 * 645 315 87 28 chr5 29448177 29448691 -170181459 + L2 LINE L2 2528 3082 -231 23161 27 1 21 chr5 29449453 29452462 -170177688 - L1PA2 LINE L1 -1270 4876 1926 7790 16 0 6 chr5 29452462 29453771 -170176379 + L1PA2 LINE L1 4851 6154 -1 21 36 0 0 chr5 29454295 29454323 -170175827 + AT_rich Low_complexity Low_complexity 1 28 0 249 57 0 0 chr5 29454422 29454457 -170175693 + (CA)n Simple_repeat Simple_repeat 2 36 0 1851 159 48 36 chr5 29454484 29454842 -170175308 - THE1B LTR MaLR -2 362 1 6067 106 11 7 chr5 29455321 29457312 -170172838 - L1PA12 LINE L1 0 6819 4818 207 0 0 0 chr5 29457312 29457335 -170172815 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2171 82 7 0 chr5 29457335 29457616 -170172534 - AluY SINE Alu -28 283 1 2268 84 3 0 chr5 29457849 29458136 -170172014 - AluY SINE Alu -23 288 1 6749 234 13 16 chr5 29458136 29459871 -170170279 - L1PA12 LINE L1 -1971 4826 3098 1011 205 17 17 chr5 29459875 29460114 -170170036 - L1P LINE L1 -1668 4478 4240 312 91 0 0 chr5 29460124 29460168 -170169982 + (TA)n Simple_repeat Simple_repeat 2 45 0 10213 222 74 25 chr5 29460168 29463129 -170167021 - L1PA12 LINE L1 -3704 3093 1 2424 73 7 0 chr5 29463708 29464009 -170166141 + AluY SINE Alu 1 303 -8 970 294 52 25 chr5 29464469 29464837 -170165313 + LTR16C LTR ERVL 112 489 -2 1999 118 3 19 chr5 29465460 29465774 -170164376 + AluY SINE Alu 1 309 -2 34 24 0 0 chr5 29466759 29466800 -170163350 + AT_rich Low_complexity Low_complexity 1 41 0 1965 342 67 52 chr5 29467197 29468872 -170161278 + ERVL LTR ERVL 1782 3432 -2332 1522 191 0 66 chr5 29468872 29469191 -170160959 + AluJb SINE Alu 6 303 -9 1965 342 67 52 chr5 29469191 29469207 -170160943 + ERVL LTR ERVL 3432 3446 -2318 2187 188 19 37 chr5 29469207 29469671 -170160479 - MSTB2 LTR MaLR -1 456 1 1965 342 67 52 chr5 29469671 29470111 -170160039 + ERVL LTR ERVL 3446 3944 -1820 2126 149 25 6 chr5 29471177 29471533 -170158617 + THE1B LTR MaLR 1 363 -1 21 71 0 0 chr5 29472052 29472094 -170158056 + AT_rich Low_complexity Low_complexity 1 42 0 308 156 0 26 chr5 29472350 29472427 -170157723 + (TAGA)n Simple_repeat Simple_repeat 3 77 0 213 269 0 0 chr5 29472921 29472973 -170157177 + (TG)n Simple_repeat Simple_repeat 1 52 0 2148 172 36 19 chr5 29473047 29473466 -170156684 + MSTB LTR MaLR 1 426 0 1292 237 51 88 chr5 29473471 29474072 -170156078 + MLT1E2 LTR MaLR 72 624 -2 256 346 92 29 chr5 29474148 29474388 -170155762 + MIR SINE MIR 6 260 -2 275 328 60 0 chr5 29475095 29475229 -170154921 - MER5B DNA MER1_type -30 148 7 27 0 0 0 chr5 29476189 29476216 -170153934 + AT_rich Low_complexity Low_complexity 1 27 0 1913 163 0 0 chr5 29476577 29476878 -170153272 - AluJb SINE Alu -11 301 1 301 241 293 0 chr5 29477030 29477146 -170153004 - MIR SINE MIR -56 206 57 885 277 76 38 chr5 29477377 29477720 -170152430 + MER57A LTR ERV1 42 397 -6 1223 251 77 69 chr5 29477836 29478447 -170151703 + L1M4 LINE L1 2440 3064 -3082 1874 134 6 22 chr5 29478447 29478761 -170151389 + AluSc SINE Alu 1 309 0 1223 251 77 69 chr5 29478761 29479219 -170150931 + L1M4 LINE L1 3064 3517 -2629 264 200 25 50 chr5 29479241 29479321 -170150829 + L1P LINE L1 3600 3677 -2469 813 250 103 25 chr5 29480037 29480433 -170149717 + L1M4 LINE L1 3673 4099 -2047 348 244 64 35 chr5 29480467 29480639 -170149511 + L1M4 LINE L1 4244 4420 -1726 297 252 50 25 chr5 29480711 29480870 -170149280 + L1M4 LINE L1 4590 4752 -1394 1081 217 114 44 chr5 29482556 29482897 -170147253 - MLT1A1 LTR MaLR 0 365 1 1055 246 60 63 chr5 29483010 29483457 -170146693 + MER39 LTR ERV1 244 689 -18 201 316 41 31 chr5 29484316 29484414 -170145736 - L2 LINE L2 -1017 2297 2199 571 196 245 20 chr5 29484911 29485115 -170145035 - MIR SINE MIR -10 252 3 260 265 12 0 chr5 29485370 29485453 -170144697 + (CATATA)n Simple_repeat Simple_repeat 1 84 0 1261 285 46 53 chr5 29485604 29486246 -170143904 + HsTC2a DNA Tc2 14 652 -1248 2089 79 0 60 chr5 29486246 29486587 -170143563 - AluY SINE Alu 0 311 1 1261 285 46 53 chr5 29486587 29486677 -170143473 + HsTC2a DNA Tc2 652 741 -3 182 118 29 0 chr5 29487736 29487770 -170142380 + CT-rich Low_complexity Low_complexity 2 36 0 752 183 65 21 chr5 29489490 29489676 -170140474 + L1MCc LINE L1 41 234 -6189 529 300 52 54 chr5 29489765 29490249 -170139901 + L1MCc LINE L1 1006 1488 -4935 283 303 52 61 chr5 29490262 29490283 -170139867 + L1MCc LINE L1 1505 1525 -5416 13097 41 1 1 chr5 29490283 29492661 -170137489 + L1PA4 LINE L1 3775 6153 -2 283 303 52 61 chr5 29492661 29493270 -170136880 + L1MCc LINE L1 1525 2128 -4813 311 289 102 33 chr5 29493311 29493760 -170136390 + L1MCc LINE L1 2387 2866 -4256 317 317 74 22 chr5 29493794 29494160 -170135990 + L1MCc LINE L1 2999 3383 -3558 1922 173 39 63 chr5 29494209 29494248 -170135902 - MSTB LTR MaLR 0 426 388 1723 162 10 3 chr5 29494248 29494538 -170135612 + AluSx SINE Alu 1 292 -20 1922 173 39 63 chr5 29494538 29494909 -170135241 - MSTB LTR MaLR -38 388 26 537 244 76 50 chr5 29494915 29495329 -170134821 + L1MCc LINE L1 3507 3939 -3002 2011 114 20 27 chr5 29495329 29495627 -170134523 + AluSc SINE Alu 1 296 -13 537 244 76 50 chr5 29495627 29495737 -170134413 + L1MCc LINE L1 3939 4045 -2896 3594 198 29 3 chr5 29495770 29496487 -170133663 - L1PA16 LINE L1 -16 6150 5415 * 8429 223 84 55 chr5 29496479 29499486 -170130664 - L1 LINE L1 -752 6097 3003 36057 97 12 8 chr5 29499495 29505620 -170124530 - L1PA6 LINE L1 -2 6152 11 739 171 36 17 chr5 29505597 29505803 -170124347 - L1PA15-16 LINE L1 -3820 2326 2118 * 1607 218 6 0 chr5 29505793 29506109 -170124041 - L1PA15-16 LINE L1 -4229 2620 2303 448 275 7 0 chr5 29506111 29506249 -170123901 + L1 LINE L1 3346 3484 -2662 1095 270 14 3 chr5 29506262 29506606 -170123544 - L1PA15-16 LINE L1 -4560 2289 1942 401 351 89 56 chr5 29507434 29507950 -170122200 - L1PA15-16 LINE L1 -6175 664 132 904 172 73 34 chr5 29508089 29508293 -170121857 - L1MA7 LINE L1 -171 6120 5909 748 183 35 0 chr5 29508293 29508462 -170121688 + L1MA7 LINE L1 6113 6287 -4 1186 271 82 20 chr5 29508467 29509080 -170121070 + L1M4 LINE L1 4327 4977 -1169 351 291 82 69 chr5 29509161 29509525 -170120625 - L1M4 LINE L1 -786 5360 4992 1785 164 40 30 chr5 29510830 29511201 -170118949 - THE1C LTR MaLR 0 375 1 8900 147 11 36 chr5 29511201 29512818 -170117332 - THE1C-int LTR MaLR 0 1580 4 1382 192 54 40 chr5 29512822 29513192 -170116958 - THE1C LTR MaLR 0 375 1 591 282 102 29 chr5 29513583 29513828 -170116322 - MLT1D LTR MaLR -3 502 240 1795 228 71 9 chr5 29513832 29514253 -170115897 + LOR1b LTR ERV1 11 457 -4 530 227 45 91 chr5 29514257 29514499 -170115651 - MLT1D LTR MaLR -272 233 3 5039 185 43 8 chr5 29514759 29515862 -170114288 - L1MA5 LINE L1 -2 7319 6181 219 36 0 0 chr5 29515862 29515890 -170114260 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 2026 118 0 0 chr5 29515890 29516170 -170113980 - AluY SINE Alu -28 283 4 6596 239 94 15 chr5 29516181 29518573 -170111577 - L1MA5 LINE L1 -2377 4790 1969 1474 211 3 0 chr5 29518573 29518862 -170111288 - AluJo SINE Alu -20 292 3 6596 239 94 15 chr5 29518862 29520247 -170109903 - L1MA5 LINE L1 -5198 1969 695 434 343 6 39 chr5 29520255 29520433 -170109717 - L1MA5 LINE L1 -6333 835 664 21 57 0 0 chr5 29520673 29520708 -170109442 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 29520763 29520791 -170109359 + AT_rich Low_complexity Low_complexity 1 28 0 414 0 0 0 chr5 29521307 29521353 -170108797 + (CA)n Simple_repeat Simple_repeat 2 47 0 4876 182 29 13 chr5 29521734 29523036 -170107114 + L1PA16 LINE L1 4833 6157 -9 21 0 0 0 chr5 29523036 29523057 -170107093 + AT_rich Low_complexity Low_complexity 1 21 0 1377 202 52 3 chr5 29523070 29523357 -170106793 + MLT2D LTR ERVL 9 309 -105 251 355 27 0 chr5 29523382 29523492 -170106658 + MLT1I LTR MaLR 26 138 -271 328 275 64 0 chr5 29523617 29523726 -170106424 + MLT1I LTR MaLR 294 409 0 278 375 64 27 chr5 29523787 29524269 -170105881 + ERVL LTR ERVL 1506 2005 -3759 195 42 0 0 chr5 29524426 29524450 -170105700 + (TA)n Simple_repeat Simple_repeat 2 25 0 836 281 40 16 chr5 29524583 29524836 -170105314 + ERVL LTR ERVL 2272 2530 -3124 279 354 49 22 chr5 29525195 29525418 -170104732 + ERVL LTR ERVL 2857 3085 -2569 1683 6 0 0 chr5 29526167 29526350 -170103800 - AluYa5 SINE Alu -128 183 1 333 347 33 49 chr5 29526592 29527042 -170103108 - L1M4 LINE L1 -2691 3455 3013 21 0 0 0 chr5 29527226 29527247 -170102903 + AT_rich Low_complexity Low_complexity 1 21 0 297 211 39 44 chr5 29527353 29527533 -170102617 + (TA)n Simple_repeat Simple_repeat 2 180 0 492 272 84 10 chr5 29527743 29527945 -170102205 + L1MD3 LINE L1 6990 7206 -789 442 246 31 0 chr5 29527952 29528082 -170102068 + MLT1F1 LTR MaLR 1 134 -433 1433 243 103 7 chr5 29528082 29528501 -170101649 + L1MD3 LINE L1 7411 7869 -126 2260 113 8 31 chr5 29528773 29529126 -170101024 - THE1B LTR MaLR -19 345 1 218 300 14 0 chr5 29529837 29529907 -170100243 + GA-rich Low_complexity Low_complexity 1 71 0 1719 190 10 70 chr5 29530609 29531024 -170099126 + MLT1B LTR MaLR 1 390 0 750 140 0 0 chr5 29531639 29531753 -170098397 - AluSp/q SINE Alu -12 301 188 2004 141 0 3 chr5 29531831 29532137 -170098013 - AluSx SINE Alu -7 305 1 206 250 11 68 chr5 29532281 29532369 -170097781 - MIR SINE MIR -56 206 124 22 35 0 0 chr5 29532905 29532934 -170097216 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 29533379 29533400 -170096750 + AT_rich Low_complexity Low_complexity 1 21 0 211 313 123 31 chr5 29533551 29533746 -170096404 + MIR SINE MIR 48 260 -2 1952 62 0 33 chr5 29534086 29534360 -170095790 - L1PA7 LINE L1 0 6154 5890 409 358 48 60 chr5 29534435 29534840 -170095310 - L2 LINE L2 -148 3165 2768 268 337 32 0 chr5 29534848 29534943 -170095207 + MIR SINE MIR 1 98 -164 204 211 0 0 chr5 29535673 29535711 -170094439 + (CA)n Simple_repeat Simple_repeat 2 39 0 384 325 106 56 chr5 29536123 29536480 -170093670 + L1MEd LINE L1 407 781 -5338 318 349 59 21 chr5 29536635 29536873 -170093277 + HAL1 LINE L1 195 441 -2066 2243 127 3 0 chr5 29536876 29537200 -170092950 + L1PB1 LINE L1 5797 6121 -30 21 36 0 0 chr5 29537415 29537443 -170092707 + AT_rich Low_complexity Low_complexity 1 28 0 265 302 101 41 chr5 29537484 29537653 -170092497 + HAL1 LINE L1 743 921 -1586 2757 48 6 14 chr5 29537702 29538058 -170092092 + L1PA5 LINE L1 5797 6149 -5 399 295 58 7 chr5 29538100 29538239 -170091911 - L1ME LINE L1 -2025 4357 4212 * 556 316 21 24 chr5 29538232 29538561 -170091589 - L1ME LINE L1 -3801 2581 2321 21 36 0 0 chr5 29538752 29538780 -170091370 + AT_rich Low_complexity Low_complexity 1 28 0 267 292 67 48 chr5 29538814 29539438 -170090712 - L1ME LINE L1 -4559 2004 1266 198 0 0 0 chr5 29539449 29539471 -170090679 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 4200 146 6 22 chr5 29539471 29540145 -170090005 - L1PA16 LINE L1 -11 6155 5492 2252 107 0 0 chr5 29540145 29540443 -170089707 - AluY SINE Alu -12 299 2 4200 146 6 22 chr5 29540443 29540493 -170089657 - L1PA16 LINE L1 -674 5492 5443 2029 207 47 6 chr5 29540493 29540961 -170089189 + L1P LINE L1 4561 5047 -1099 879 240 64 43 chr5 29542150 29542469 -170087681 - L1MB7 LINE L1 0 6184 5868 2245 112 0 0 chr5 29542499 29542802 -170087348 - AluSx SINE Alu -9 303 1 281 335 23 40 chr5 29543970 29544143 -170086007 - MIR SINE MIR 0 262 93 1397 306 3 67 chr5 29544274 29544604 -170085546 + AluSx SINE Alu 1 309 -3 184 317 48 39 chr5 29544768 29544872 -170085278 - L2 LINE L2 -14 3299 3195 2255 107 0 0 chr5 29545955 29546264 -170083886 + AluSg SINE Alu 1 309 -1 32 57 0 0 chr5 29547290 29547343 -170082807 + AT_rich Low_complexity Low_complexity 1 53 0 913 136 19 7 chr5 29547834 29547988 -170082162 + L1PB2 LINE L1 5993 6148 -3 786 272 15 0 chr5 29548124 29548330 -170081820 + MER3 DNA MER1_type 1 209 0 1389 275 50 44 chr5 29549029 29549887 -170080263 + L1PB4 LINE L1 4 2105 -4925 8373 222 71 36 chr5 29549989 29551061 -170079089 + L1PB4 LINE L1 2350 3382 -3724 1981 155 0 0 chr5 29551061 29551357 -170078793 - AluSx SINE Alu -16 296 1 8373 222 71 36 chr5 29551357 29551812 -170078338 + L1PB4 LINE L1 3382 3819 -3287 2191 120 0 0 chr5 29551812 29552120 -170078030 + AluSg SINE Alu 1 308 -2 8373 222 71 36 chr5 29552120 29553866 -170076284 + L1PB4 LINE L1 3819 6158 -948 2530 205 23 4 chr5 29554516 29555072 -170075078 + L1PB4 LINE L1 6550 7116 0 235 270 16 0 chr5 29555194 29555257 -170074893 + MLT1F1 LTR MaLR 44 107 -460 4630 93 1 30 chr5 29555300 29555391 -170074759 + PABL_A LTR ERV1 1 93 -567 2262 92 3 0 chr5 29555391 29555694 -170074456 + AluSx SINE Alu 1 304 -8 4630 93 1 30 chr5 29555694 29556281 -170073869 + PABL_A LTR ERV1 93 660 0 2509 191 28 8 chr5 29556307 29556805 -170073345 + L1MC3 LINE L1 7260 7767 -18 598 188 15 53 chr5 29557023 29557156 -170072994 - FLAM_A SINE Alu -5 128 1 22 35 0 0 chr5 29558682 29558711 -170071439 + AT_rich Low_complexity Low_complexity 1 29 0 5198 118 14 1 chr5 29559030 29559807 -170070343 + L1PA13 LINE L1 5370 6156 -7 1422 220 28 43 chr5 29560877 29561273 -170068877 + MLT1B LTR MaLR 1 390 0 31 44 0 0 chr5 29561680 29561725 -170068425 + AT_rich Low_complexity Low_complexity 1 45 0 234 200 8 56 chr5 29561738 29561863 -170068287 + A-rich Low_complexity Low_complexity 1 119 0 248 254 18 0 chr5 29562093 29562148 -170068002 - L2 LINE L2 0 3313 3258 199 325 35 44 chr5 29562395 29562509 -170067641 + MIR SINE MIR 27 139 -123 3568 121 27 17 chr5 29562807 29563394 -170066756 + MER4E LTR ERV1 1 593 -173 388 67 4 32 chr5 29563518 29563581 -170066569 + MLT2A1 LTR ERVL 391 444 0 34 0 0 0 chr5 29563600 29563634 -170066516 + AT_rich Low_complexity Low_complexity 1 34 0 2990 91 8 0 chr5 29563687 29564084 -170066066 - MLT2A1 LTR ERVL -40 404 5 4805 140 61 3 chr5 29564138 29564978 -170065172 + L1P3 LINE L1 4 794 -5352 5949 52 18 4 chr5 29564978 29565746 -170064404 + L1PA5 LINE L1 5368 6151 -3 4805 140 61 3 chr5 29565746 29565760 -170064390 + L1P3 LINE L1 794 3783 -2363 237 33 0 0 chr5 29566073 29566103 -170064047 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 77 0 0 chr5 29566433 29566459 -170063691 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 23 33 0 0 chr5 29567877 29567907 -170062243 + AT_rich Low_complexity Low_complexity 1 30 0 243 365 0 0 chr5 29568016 29568120 -170062030 - L1 LINE L1 -1983 4163 4060 37 90 0 0 chr5 29568878 29568978 -170061172 + AT_rich Low_complexity Low_complexity 1 100 0 514 121 17 35 chr5 29619578 29619694 -170010456 + AluYb8 SINE Alu 205 318 0 969 267 4 24 chr5 29619699 29619950 -170010200 - MLT2B1 LTR ERVL -274 246 1 949 369 42 14 chr5 29620176 29620796 -170009354 - HERV16 LTR ERVL -2249 2747 2111 921 193 10 0 chr5 29620973 29621165 -170008985 - L1M4c LINE L1 -4874 1510 1317 4239 196 7 14 chr5 29621174 29621986 -170008164 + Tigger1 DNA MER2_type 1 807 -1611 634 247 46 42 chr5 29622089 29622328 -170007822 + L1ME2 LINE L1 5751 5990 -174 537 234 28 0 chr5 29622319 29622464 -170007686 + L1MA10 LINE L1 6185 6333 -1 * 202 247 0 24 chr5 29622891 29622976 -170007174 + GA-rich Low_complexity Low_complexity 2 84 0 3161 242 33 33 chr5 29623678 29624694 -170005456 + L1M3 LINE L1 4417 5434 -737 2044 173 53 9 chr5 29624694 29625144 -170005006 + L1PA15 LINE L1 5693 6162 -3 1176 92 0 0 chr5 29625337 29625501 -170004649 + Tigger1 DNA MER2_type 804 967 -1451 5392 210 19 11 chr5 29625506 29626643 -170003507 + Tigger1 DNA MER2_type 1265 2410 -8 4980 202 44 56 chr5 29626666 29627959 -170002191 - L1M4c LINE L1 -5093 1291 14 187 409 94 6 chr5 29628297 29628456 -170001694 - L2 LINE L2 -295 2977 2805 29 78 0 0 chr5 29628978 29629042 -170001108 + AT_rich Low_complexity Low_complexity 1 64 0 231 246 8 157 chr5 29629042 29629176 -170000974 - MER58B DNA MER1_type -4 337 224 342 318 132 42 chr5 29629587 29630388 -169999762 + L1MB3 LINE L1 3745 4617 -1529 324 320 11 11 chr5 29630939 29631114 -169999036 + L1MEc LINE L1 1581 1755 -4641 386 259 68 63 chr5 29631248 29631453 -169998697 + L1MEc LINE L1 3194 3399 -2816 398 373 71 25 chr5 29631454 29631808 -169998342 - L2 LINE L2 -1257 2057 1688 452 316 25 31 chr5 29633397 29633593 -169996557 + L1MC4 LINE L1 6765 6959 -1083 1491 119 9 9 chr5 29633875 29634093 -169996057 + AluSx SINE Alu 62 279 -33 289 119 0 0 chr5 29634093 29634135 -169996015 + AluSc SINE Alu 160 201 -98 504 136 144 42 chr5 29634135 29634253 -169995897 + AluSg/x SINE Alu 172 301 -11 21 36 0 0 chr5 29634402 29634430 -169995720 + AT_rich Low_complexity Low_complexity 1 28 0 1421 269 10 2 chr5 29634453 29634847 -169995303 + L1MEc LINE L1 3857 4253 -1962 210 158 0 0 chr5 29635033 29635071 -169995079 + A-rich Low_complexity Low_complexity 1 38 0 1857 280 39 17 chr5 29635092 29635739 -169994411 + L1MB3 LINE L1 5475 6135 -48 774 254 27 11 chr5 29636080 29636265 -169993885 - MER58A DNA MER1_type 0 224 37 630 338 43 23 chr5 29636416 29636815 -169993335 + MLT1I LTR MaLR 1 407 -2 4333 195 37 9 chr5 29637320 29637836 -169992314 - L1MA9 LINE L1 0 6312 5757 243 88 0 0 chr5 29637836 29637870 -169992280 + (TG)n Simple_repeat Simple_repeat 2 35 0 4333 195 37 9 chr5 29637870 29638269 -169991881 - L1MA9 LINE L1 -555 5757 5371 359 360 36 0 chr5 29638316 29638427 -169991723 - L1M2a LINE L1 -6739 429 315 913 156 0 11 chr5 29638558 29638737 -169991413 + CT-rich Low_complexity Low_complexity 4 180 0 195 157 0 0 chr5 29638740 29638791 -169991359 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 901 186 34 0 chr5 29638802 29638979 -169991171 - AluSg/x SINE Alu 0 312 130 26 30 0 0 chr5 29639535 29639568 -169990582 + AT_rich Low_complexity Low_complexity 1 33 0 1884 106 40 7 chr5 29640382 29640688 -169989462 + AluSx SINE Alu 1 315 0 26 30 0 0 chr5 29641052 29641085 -169989065 + AT_rich Low_complexity Low_complexity 1 33 0 312 240 0 13 chr5 29641429 29641504 -169988646 - MIR SINE MIR -16 246 173 1457 257 33 38 chr5 29641649 29642197 -169987953 - LTR55 LTR ERV -2 546 2 201 39 0 0 chr5 29642289 29642315 -169987835 + (GA)n Simple_repeat Simple_repeat 1 26 0 1346 213 78 27 chr5 29642512 29642883 -169987267 - MLT1B LTR MaLR 0 390 1 339 44 0 0 chr5 29642976 29643021 -169987129 + (TG)n Simple_repeat Simple_repeat 2 46 0 328 289 58 10 chr5 29643588 29643692 -169986458 - L2 LINE L2 -36 3277 3169 3338 182 72 49 chr5 29644486 29645344 -169984806 + L1MC3 LINE L1 6895 7772 -13 184 255 0 0 chr5 29646196 29646243 -169983907 - L2 LINE L2 0 3313 3267 294 392 59 5 chr5 29649230 29649452 -169980698 + MIR SINE MIR 24 257 -5 1033 271 97 30 chr5 29651774 29652236 -169977914 + MLT1D LTR MaLR 13 505 0 2118 126 3 0 chr5 29652469 29652771 -169977379 + AluSp SINE Alu 1 303 -10 2571 246 44 71 chr5 29652972 29653893 -169976257 + L1MCa LINE L1 3 880 -5165 631 202 0 0 chr5 29653893 29654002 -169976148 + AluJb SINE Alu 22 130 -182 180 0 0 0 chr5 29654009 29654029 -169976121 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2387 209 76 52 chr5 29654034 29654251 -169975899 + L1MCa LINE L1 966 1176 -5388 1484 254 14 6 chr5 29654251 29654613 -169975537 + MLT1A1 LTR MaLR 1 365 0 2387 209 76 52 chr5 29654613 29655389 -169974761 + L1MCa LINE L1 1176 2071 -4493 283 211 0 28 chr5 29655492 29655563 -169974587 - MSTD LTR MaLR -3 393 325 501 223 154 47 chr5 29655666 29655899 -169974251 + L1MCa LINE L1 1930 2187 -4558 1812 158 3 0 chr5 29656222 29656519 -169973631 - AluSx SINE Alu -14 298 1 933 228 12 69 chr5 29656525 29656718 -169973432 + L1ME2 LINE L1 5643 5811 -353 1984 145 3 0 chr5 29656718 29657029 -169973121 + AluSx SINE Alu 1 312 0 933 228 12 69 chr5 29657029 29657168 -169972982 + L1ME2 LINE L1 5811 5956 -208 313 299 72 24 chr5 29657180 29657347 -169972803 + L1MCa LINE L1 3656 3830 -2734 228 67 0 0 chr5 29657557 29657587 -169972563 + (CA)n Simple_repeat Simple_repeat 1 30 0 372 22 0 0 chr5 29659001 29659046 -169971104 + (TG)n Simple_repeat Simple_repeat 2 46 0 4120 175 21 2 chr5 29659448 29660255 -169969895 - L1PA13 LINE L1 -783 5363 4542 5735 98 9 1 chr5 29660261 29661088 -169969062 + L1PA13 LINE L1 5330 6162 -1 24 0 0 0 chr5 29661149 29661173 -169968977 + AT_rich Low_complexity Low_complexity 1 24 0 702 235 25 6 chr5 29661599 29661761 -169968389 + MIR SINE MIR 96 260 -2 2368 70 26 0 chr5 29661965 29662267 -169967883 + AluY SINE Alu 1 310 -1 2108 130 3 0 chr5 29662638 29662946 -169967204 + AluSg SINE Alu 1 309 -1 1941 141 44 36 chr5 29662973 29663334 -169966816 - THE1B LTR MaLR 0 364 1 338 299 97 62 chr5 29663494 29663576 -169966574 - MLT1G1 LTR MaLR -32 510 432 1982 84 29 42 chr5 29663576 29663885 -169966265 - AluSg1 SINE Alu -4 305 1 338 299 97 62 chr5 29663885 29664278 -169965872 - MLT1G1 LTR MaLR -110 432 1 4760 154 26 27 chr5 29664861 29665832 -169964318 + L1PA16 LINE L1 5185 6156 -10 258 239 18 46 chr5 29666637 29666746 -169963404 + (CATATA)n Simple_repeat Simple_repeat 5 110 0 253 222 0 71 chr5 29666746 29666845 -169963305 + L1MC4 LINE L1 6612 6703 -1339 260 172 17 0 chr5 29666845 29666903 -169963247 + (TA)n Simple_repeat Simple_repeat 1 59 0 24 53 0 0 chr5 29667111 29667149 -169963001 + AT_rich Low_complexity Low_complexity 1 38 0 351 0 0 0 chr5 29668264 29668303 -169961847 + (CA)n Simple_repeat Simple_repeat 1 39 0 556 200 10 0 chr5 29668304 29668404 -169961746 - MLT2B1 LTR ERVL -78 442 342 235 234 21 0 chr5 29668466 29668513 -169961637 - MLT2B1 LTR ERVL -170 350 303 415 226 219 20 chr5 29668532 29668678 -169961472 + AluY SINE Alu 137 311 0 340 98 233 0 chr5 29668756 29668889 -169961261 + AluYa8 SINE Alu 1 164 -136 24 0 0 0 chr5 29669704 29669728 -169960422 + AT_rich Low_complexity Low_complexity 1 24 0 318 101 0 130 chr5 29669728 29669797 -169960353 - HY4 scRNA scRNA 0 93 34 2652 48 0 0 chr5 29670669 29670980 -169959170 - AluY SINE Alu 0 311 1 2286 143 8 0 chr5 29672285 29672657 -169957493 + THE1C LTR MaLR 1 375 0 9399 129 38 13 chr5 29672658 29674199 -169955951 + THE1C-int LTR MaLR 2 1580 0 2511 115 14 0 chr5 29674199 29674564 -169955586 + THE1C LTR MaLR 5 375 0 456 314 91 32 chr5 29674593 29674845 -169955305 - L2 LINE L2 -349 2965 2699 3160 226 33 20 chr5 29676089 29676931 -169953219 - L1MB7 LINE L1 -34 6150 5298 2678 294 101 26 chr5 29676942 29678725 -169951425 - L1M4c LINE L1 -3884 2762 825 257 241 0 0 chr5 29679139 29679193 -169950957 - L1M4c LINE L1 -6299 347 294 453 200 0 11 chr5 29679214 29679309 -169950841 - L1M4 LINE L1 -740 5936 5843 421 139 63 0 chr5 29679310 29679389 -169950761 + LTR54 LTR ERV1 387 470 -40 224 57 0 29 chr5 29679461 29679496 -169950654 + (TA)n Simple_repeat Simple_repeat 2 35 0 205 222 0 19 chr5 29679568 29679622 -169950528 + (TATAA)n Simple_repeat Simple_repeat 2 54 0 24 53 0 0 chr5 29679660 29679698 -169950452 + AT_rich Low_complexity Low_complexity 1 38 0 1122 94 0 35 chr5 29679798 29679968 -169950182 - L1PA8A LINE L1 -54 6077 5914 5141 259 77 68 chr5 29679991 29680464 -169949686 - L1M4 LINE L1 -874 5770 5303 2409 134 3 18 chr5 29680464 29680845 -169949305 - THE1C LTR MaLR 0 375 1 5141 259 77 68 chr5 29680845 29681804 -169948346 - L1M4 LINE L1 -1341 5303 4354 2156 122 0 10 chr5 29681804 29682107 -169948043 + AluSg SINE Alu 1 300 -10 5141 259 77 68 chr5 29682107 29684491 -169945659 - L1M4 LINE L1 -2290 4354 1953 522 167 50 67 chr5 29684755 29684875 -169945275 + MER76 LTR ERV 569 686 -2 447 225 22 77 chr5 29684877 29684960 -169945190 - L1M4 LINE L1 -4970 1572 1486 2046 119 7 3 chr5 29684960 29685263 -169944887 - AluSg SINE Alu -6 304 1 447 225 22 77 chr5 29685263 29685414 -169944736 - L1M4 LINE L1 -5056 1486 1337 218 216 52 15 chr5 29685414 29685548 -169944602 + (TTATA)n Simple_repeat Simple_repeat 1 139 0 773 237 71 120 chr5 29685617 29686026 -169944124 + MSTD LTR MaLR 1 389 -7 352 219 10 0 chr5 29686028 29686124 -169944026 - L1M4 LINE L1 -5268 1274 1178 1282 214 98 11 chr5 29686133 29686489 -169943661 - L1M4 LINE L1 -5405 1137 751 1666 251 17 37 chr5 29686492 29687010 -169943140 - L1M4 LINE L1 -5897 645 138 2072 122 0 0 chr5 29687011 29687329 -169942821 + AluSq SINE Alu 2 319 0 580 254 0 0 chr5 29687329 29687467 -169942683 - L1M4 LINE L1 -6391 151 14 2027 153 117 5 chr5 29688364 29688749 -169941401 + MSTA LTR MaLR 1 428 0 1048 230 9 0 chr5 29688749 29688962 -169941188 - MLT1A1 LTR MaLR -7 358 144 2897 34 3 0 chr5 29688965 29689318 -169940832 - L1PA4 LINE L1 0 6155 5802 1536 226 3 13 chr5 29689322 29689640 -169940510 - MLT1A1 LTR MaLR -50 315 1 1928 245 48 35 chr5 29689640 29690442 -169939708 - MLT1A1-int LTR MaLR 0 1735 748 676 265 70 30 chr5 29690442 29690672 -169939478 + MLT1A1 LTR MaLR 125 363 -2 1352 225 11 4 chr5 29690676 29690956 -169939194 + MLT1A1-int LTR MaLR 2 283 -1452 406 182 0 0 chr5 29690958 29691024 -169939126 - MLT1A1 LTR MaLR -299 66 1 198 128 0 0 chr5 29691037 29691076 -169939074 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 1029 235 110 134 chr5 29691143 29691607 -169938543 + LTR40a LTR ERVL 8 460 -2 411 263 87 76 chr5 29691615 29691893 -169938257 - LTR37B LTR ERV1 -84 384 99 1539 238 79 2 chr5 29691893 29692325 -169937825 - MLT1C LTR MaLR 0 467 3 411 263 87 76 chr5 29692325 29692426 -169937724 - LTR37B LTR ERV1 -369 99 1 1385 178 36 88 chr5 29692828 29693239 -169936911 + MLT1B LTR MaLR 1 390 0 239 266 91 45 chr5 29693334 29693488 -169936662 + L2 LINE L2 736 896 -2418 336 297 67 55 chr5 29693537 29693943 -169936207 - L1MEd LINE L1 -844 1646 895 1604 205 106 14 chr5 29693975 29694400 -169935750 + MLT1C LTR MaLR 1 464 -3 241 250 16 16 chr5 29694556 29694620 -169935530 - L1MEd LINE L1 -5491 628 565 21 71 0 0 chr5 29695410 29695452 -169934698 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr5 29695896 29695917 -169934233 + AT_rich Low_complexity Low_complexity 1 21 0 198 217 0 0 chr5 29696472 29696518 -169933632 + L3 LINE CR1 658 703 -874 3154 206 50 15 chr5 29696823 29697721 -169932429 - L1PA16 LINE L1 -9 6157 5198 1007 246 38 55 chr5 29697724 29698123 -169932027 + LTR52 LTR ERVL 8 399 -22 1089 256 58 75 chr5 29698143 29698878 -169931272 - L1M4 LINE L1 -947 5199 4477 1596 280 129 24 chr5 29698921 29699826 -169930324 - L1M4 LINE L1 -1806 4340 3341 345 188 25 12 chr5 29699892 29699972 -169930178 - MLT1B LTR MaLR -119 271 191 1081 203 14 5 chr5 29699973 29700261 -169929889 + MLT1B LTR MaLR 3 331 -59 1819 188 0 3 chr5 29700261 29700570 -169929580 + AluJb SINE Alu 1 308 -4 288 119 45 45 chr5 29700883 29700950 -169929200 + MLT1B LTR MaLR 324 390 0 1002 205 48 4 chr5 29700950 29701218 -169928932 - L1MC3 LINE L1 -678 7525 7246 1035 194 15 20 chr5 29701726 29701927 -169928223 - L1MC3 LINE L1 -955 7248 7049 905 280 89 35 chr5 29701928 29702331 -169927819 + MER76 LTR ERV 1 425 -263 962 226 42 38 chr5 29702432 29702697 -169927453 + MER76 LTR ERV 415 680 -8 2541 223 87 3 chr5 29702705 29703373 -169926777 - L1MC3 LINE L1 -1151 7052 6329 998 203 52 12 chr5 29703371 29703751 -169926399 - L1MC3 LINE L1 -743 5821 5558 * 230 247 32 43 chr5 29703751 29703844 -169926306 - L1MC3 LINE L1 -1428 5136 5045 * 889 267 95 39 chr5 29703831 29704420 -169925730 - L1MC3 LINE L1 -2662 3902 3281 21 71 0 0 chr5 29704420 29704462 -169925688 + AT_rich Low_complexity Low_complexity 1 42 0 486 254 93 8 chr5 29704472 29704740 -169925410 - L1MC3 LINE L1 -4372 2373 1979 1876 99 7 24 chr5 29704745 29705037 -169925113 + MER51C LTR ERV1 354 640 0 288 215 140 32 chr5 29705058 29705151 -169924999 - L1MC3 LINE L1 -5529 516 414 270 300 34 101 chr5 29705185 29705360 -169924790 - L1MC3 LINE L1 -5759 286 134 2816 167 0 4 chr5 29705360 29705852 -169924298 - L1PA15 LINE L1 -3 6162 5673 270 300 34 101 chr5 29705852 29705943 -169924207 - L1MC3 LINE L1 -5911 134 38 422 281 0 0 chr5 29706931 29707062 -169923088 + L1MA10 LINE L1 6043 6332 -2 732 269 153 28 chr5 29707308 29707668 -169922482 - MLT1C LTR MaLR -4 463 59 1228 276 21 42 chr5 29707721 29708218 -169921932 - MLT1C-int LTR MaLR 0 1735 962 5762 79 2 7 chr5 29708232 29709580 -169920570 + L1PA4 LINE L1 4681 6020 -135 2858 52 11 0 chr5 29709685 29710050 -169920100 + L1PA4 LINE L1 5784 6152 -3 3422 225 31 25 chr5 29710185 29711059 -169919091 - MLT1C-int LTR MaLR -489 882 4 239 36 36 55 chr5 29711125 29711180 -169918970 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 1229 195 132 0 chr5 29711306 29711578 -169918572 - MLT2C1 LTR ERVL -89 308 1 2088 126 0 7 chr5 29712630 29712924 -169917226 + AluSc SINE Alu 3 294 -15 867 206 6 0 chr5 29713180 29713340 -169916810 - MSTD LTR MaLR -235 161 1 372 175 0 0 chr5 29713627 29713684 -169916466 + AluJ/FLAM SINE Alu 1 57 -245 480 279 182 34 chr5 29713735 29714086 -169916064 + HAL1 LINE L1 1732 2134 -373 1927 138 0 28 chr5 29714277 29714596 -169915554 - AluSq SINE Alu -3 310 1 210 339 48 40 chr5 29715531 29715655 -169914495 - MIR SINE MIR -104 158 34 342 45 0 0 chr5 29717613 29717657 -169912493 + (CA)n Simple_repeat Simple_repeat 2 45 0 296 111 37 0 chr5 29717702 29717756 -169912394 + L1MD3 LINE L1 7930 7985 -10 284 0 28 0 chr5 29717839 29717875 -169912275 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 2025 107 0 38 chr5 29717875 29718193 -169911957 + AluSg SINE Alu 3 308 -2 241 337 116 39 chr5 29718422 29718680 -169911470 + L2 LINE L2 2186 2463 -851 21 0 0 0 chr5 29718755 29718776 -169911374 + AT_rich Low_complexity Low_complexity 1 21 0 2392 48 0 7 chr5 29719272 29719567 -169910583 - AluY SINE Alu -18 293 1 21 89 0 0 chr5 29719886 29719942 -169910208 + AT_rich Low_complexity Low_complexity 1 56 0 40 49 0 0 chr5 29719997 29720058 -169910092 + AT_rich Low_complexity Low_complexity 1 61 0 3551 174 39 4 chr5 29720464 29721160 -169908990 - L1PA16 LINE L1 -9 6157 5438 8781 222 20 8 chr5 29721165 29723471 -169906679 + L1PA16 LINE L1 3112 5439 -727 870 258 47 16 chr5 29723998 29724312 -169905838 - MER74C LTR ERVL -139 419 13 415 27 68 0 chr5 29724729 29724802 -169905348 + (TCTA)n Simple_repeat Simple_repeat 3 80 0 1375 234 18 37 chr5 29724932 29725313 -169904837 - MLT1A2 LTR MaLR 0 374 1 52 41 0 0 chr5 29725927 29726000 -169904150 + AT_rich Low_complexity Low_complexity 1 73 0 2164 195 40 18 chr5 29728440 29728938 -169901212 + LTR22 LTR ERVK 1 509 0 307 194 65 0 chr5 29728945 29729053 -169901097 + (TCTA)n Simple_repeat Simple_repeat 2 116 0 227 161 0 16 chr5 29729054 29729116 -169901034 + (TA)n Simple_repeat Simple_repeat 1 61 0 24 67 0 0 chr5 29729556 29729601 -169900549 + AT_rich Low_complexity Low_complexity 1 45 0 261 0 0 0 chr5 29729627 29729656 -169900494 + (TG)n Simple_repeat Simple_repeat 2 30 0 534 292 146 42 chr5 29729758 29730395 -169899755 - L1M4 LINE L1 -1300 4846 4144 27 49 0 0 chr5 29730466 29730507 -169899643 + AT_rich Low_complexity Low_complexity 1 41 0 241 196 36 0 chr5 29730532 29730588 -169899562 + CT-rich Low_complexity Low_complexity 2 59 0 29 28 0 0 chr5 29730638 29730674 -169899476 + AT_rich Low_complexity Low_complexity 1 36 0 697 175 8 8 chr5 29730755 29730875 -169899275 - AluSg/x SINE Alu -64 248 129 1828 149 38 0 chr5 29730974 29731263 -169898887 + AluSq SINE Alu 1 300 -13 36 23 0 0 chr5 29731317 29731360 -169898790 + AT_rich Low_complexity Low_complexity 1 43 0 7275 95 14 20 chr5 29731890 29733008 -169897142 - L1PA7 LINE L1 -807 5339 4228 5840 86 9 4 chr5 29733008 29733817 -169896333 + L1PA7 LINE L1 5333 6150 -4 1996 194 60 21 chr5 29734248 29734713 -169895437 - L1MB3 LINE L1 -3 6180 5698 262 200 0 67 chr5 29734746 29734821 -169895329 - L1MB3 LINE L1 -150 6033 5964 1666 196 18 67 chr5 29734831 29735276 -169894874 - L1MB3 LINE L1 -473 5695 5273 450 178 0 0 chr5 29735318 29735408 -169894742 + (CA)n Simple_repeat Simple_repeat 1 90 0 22 35 0 0 chr5 29735535 29735564 -169894586 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr5 29735744 29735771 -169894379 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr5 29735814 29735844 -169894306 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr5 29736114 29736156 -169893994 + AT_rich Low_complexity Low_complexity 1 42 0 235 323 21 85 chr5 29736704 29736893 -169893257 + MIR SINE MIR 15 191 -71 27 0 0 0 chr5 29737877 29737904 -169892246 + AT_rich Low_complexity Low_complexity 1 27 0 27 0 0 0 chr5 29737972 29737999 -169892151 + AT_rich Low_complexity Low_complexity 1 27 0 692 236 6 36 chr5 29738018 29738183 -169891967 - FRAM SINE Alu -6 160 1 825 199 70 0 chr5 29738210 29738396 -169891754 + L1MA5A LINE L1 5998 6196 -101 24 32 0 0 chr5 29738405 29738436 -169891714 + AT_rich Low_complexity Low_complexity 1 31 0 24 77 0 0 chr5 29738596 29738648 -169891502 + AT_rich Low_complexity Low_complexity 1 52 0 1377 48 0 0 chr5 29738911 29739079 -169891071 - L1PA3 LINE L1 0 6155 5988 2887 38 0 0 chr5 29739079 29739426 -169890724 + L1PA3 LINE L1 5623 5969 -186 637 271 29 45 chr5 29740186 29740430 -169889720 - Charlie1 DNA MER1_type -758 2003 1764 321 303 16 9 chr5 29740434 29740574 -169889576 + L1ME1 LINE L1 5334 5474 -704 455 280 62 15 chr5 29740772 29741019 -169889131 + L1ME1 LINE L1 5679 5927 -237 273 296 27 9 chr5 29741296 29741412 -169888738 - L1MEc LINE L1 -903 1673 1532 507 309 164 4 chr5 29741707 29741976 -169888174 - MLT2E LTR ERVL -129 499 188 234 113 48 16 chr5 29742582 29742652 -169887498 + (TA)n Simple_repeat Simple_repeat 1 72 0 25 0 0 0 chr5 29742790 29742815 -169887335 + AT_rich Low_complexity Low_complexity 1 25 0 183 204 0 0 chr5 29742843 29742887 -169887263 + (TA)n Simple_repeat Simple_repeat 2 45 0 682 265 60 17 chr5 29743571 29743805 -169886345 + LTR52 LTR ERVL 1 244 -177 2077 155 0 29 chr5 29743813 29744194 -169885956 - L1PA15 LINE L1 -2 6163 5794 351 0 0 0 chr5 29744194 29744233 -169885917 + (TG)n Simple_repeat Simple_repeat 2 40 0 28 0 0 0 chr5 29744261 29744289 -169885861 + AT_rich Low_complexity Low_complexity 1 28 0 313 238 93 75 chr5 29744289 29744503 -169885647 - L1MCa LINE L1 -4223 2203 1986 233 109 22 0 chr5 29744503 29744549 -169885601 + (TA)n Simple_repeat Simple_repeat 2 48 0 5259 188 20 9 chr5 29744556 29746097 -169884053 - L1PA15 LINE L1 -426 5739 4179 1377 164 102 31 chr5 29746106 29746430 -169883720 + THE1C LTR MaLR 3 349 -26 24 0 0 0 chr5 29746993 29747017 -169883133 + AT_rich Low_complexity Low_complexity 1 24 0 207 347 54 54 chr5 29747986 29748133 -169882017 - MIR3 SINE MIR -55 153 7 180 421 7 21 chr5 29748884 29749024 -169881126 - L3 LINE CR1 -855 722 585 23 0 0 0 chr5 29749354 29749377 -169880773 + AT_rich Low_complexity Low_complexity 1 23 0 1199 264 52 92 chr5 29749875 29750493 -169879657 - MLT1E LTR MaLR 0 593 1 198 0 0 0 chr5 29750711 29750733 -169879417 + (TC)n Simple_repeat Simple_repeat 1 22 0 782 220 117 7 chr5 29750768 29751059 -169879091 - MER33 DNA MER1_type -1 323 1 945 324 27 38 chr5 29751098 29751545 -169878605 + L1MA6 LINE L1 1542 1983 -5503 4451 233 74 49 chr5 29751882 29754861 -169875289 + L1MA6 LINE L1 1929 5002 -2563 * 4504 186 47 33 chr5 29754851 29756818 -169873332 + L1MA6 LINE L1 5718 7717 -2 21 0 0 0 chr5 29756826 29756847 -169873303 + AT_rich Low_complexity Low_complexity 1 21 0 1500 184 88 25 chr5 29757016 29757369 -169872781 - THE1C LTR MaLR 0 375 1 6997 158 32 8 chr5 29757710 29758979 -169871171 - HSMAR2 DNA Mariner -1 1301 2 29 0 0 0 chr5 29759142 29759171 -169870979 + AT_rich Low_complexity Low_complexity 1 29 0 263 222 69 0 chr5 29759200 29759272 -169870878 + L1M2 LINE L1 5106 5182 -964 1873 127 66 61 chr5 29759272 29759634 -169870516 + THE1B LTR MaLR 1 364 0 8218 122 17 2 chr5 29759661 29760910 -169869240 + THE1B-int LTR MaLR 15 1281 -299 866 163 11 37 chr5 29761016 29761206 -169868944 + L1M2 LINE L1 5258 5442 -858 22 0 0 0 chr5 29761258 29761280 -169868870 + AT_rich Low_complexity Low_complexity 1 22 0 253 256 23 12 chr5 29761374 29761460 -169868690 + (TATATG)n Simple_repeat Simple_repeat 1 87 0 335 269 128 32 chr5 29761476 29761632 -169868518 - MIR SINE MIR -61 201 31 2082 153 15 26 chr5 29761725 29762536 -169867614 - L1PA16 LINE L1 -3 6163 5295 2618 211 10 50 chr5 29762539 29763099 -169867051 - L1PA16 LINE L1 -1070 5076 4550 2413 69 0 7 chr5 29763099 29763403 -169866747 - AluY SINE Alu -9 302 1 2618 211 10 50 chr5 29763403 29763569 -169866581 - L1PA16 LINE L1 -1596 4550 4379 710 157 0 0 chr5 29763583 29763704 -169866446 - L1PB1 LINE L1 -1 6150 6030 1252 155 4 17 chr5 29763707 29763939 -169866211 + L1 LINE L1 3974 4202 -1944 * 2240 225 41 2 chr5 29763925 29764484 -169865666 - L1 LINE L1 -1764 4382 3802 258 32 0 0 chr5 29764534 29764565 -169865585 + (T)n Simple_repeat Simple_repeat 1 31 0 619 288 36 39 chr5 29765035 29765344 -169864806 + MER97b DNA MER1_type? 265 572 -481 304 237 44 104 chr5 29765416 29765686 -169864464 + MER97c DNA MER1_type? 830 1083 -7 2038 122 16 3 chr5 29765876 29765993 -169864157 + AluSg SINE Alu 1 115 -195 224 75 0 25 chr5 29765993 29766033 -169864117 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 2038 122 16 3 chr5 29766033 29766218 -169863932 + AluSg SINE Alu 115 307 -3 1961 203 5 9 chr5 29766326 29766760 -169863390 + L1MA5 LINE L1 5864 6295 -5 2327 57 3 13 chr5 29767305 29767604 -169862546 - AluY SINE Alu -12 299 4 509 158 0 11 chr5 29767852 29767947 -169862203 + AluY SINE Alu 1 94 -224 876 181 69 81 chr5 29767961 29768221 -169861929 - MER44D DNA MER2_type -81 528 2 261 119 0 0 chr5 29768243 29768285 -169861865 + (TA)n Simple_repeat Simple_repeat 2 43 0 476 127 25 13 chr5 29769035 29769114 -169861036 - L1MA5 LINE L1 -439 5861 5782 659 313 72 50 chr5 29769114 29769640 -169860510 + ERVL LTR ERVL 2211 2746 -2739 717 269 5 5 chr5 29769866 29770059 -169860091 + MLT2B1 LTR ERVL 1 193 -327 2123 221 44 27 chr5 29770063 29770587 -169859563 - L1 LINE L1 -3237 2909 2377 3162 177 17 22 chr5 29770626 29771436 -169858714 + L1MA8 LINE L1 5152 5956 -335 777 216 40 0 chr5 29771440 29771639 -169858511 + L1MA8 LINE L1 6082 6288 -3 22 70 0 0 chr5 29772697 29772740 -169857410 + AT_rich Low_complexity Low_complexity 1 43 0 979 221 76 92 chr5 29773083 29773427 -169856723 + MLT1A2 LTR MaLR 1 349 -25 361 0 20 20 chr5 29773427 29773477 -169856673 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1389 30 0 0 chr5 29773477 29773642 -169856508 - L1PA3 LINE L1 -16 6139 5975 979 221 76 92 chr5 29773642 29773676 -169856474 + MLT1A2 LTR MaLR 347 374 0 21 36 0 0 chr5 29774476 29774504 -169855646 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 29774530 29774558 -169855592 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr5 29774691 29774727 -169855423 + AT_rich Low_complexity Low_complexity 1 36 0 30 27 0 0 chr5 29776224 29776261 -169853889 + AT_rich Low_complexity Low_complexity 1 37 0 306 0 0 0 chr5 29776330 29776364 -169853786 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 11365 35 0 1 chr5 29776367 29778499 -169851651 - L1PA4 LINE L1 -8 6147 4017 255 56 28 0 chr5 29778500 29778536 -169851614 + L1PA4 LINE L1 3972 4008 -2138 289 75 38 0 chr5 29778751 29778804 -169851346 + (TG)n Simple_repeat Simple_repeat 2 56 0 204 189 40 27 chr5 29779024 29779098 -169851052 + (TA)n Simple_repeat Simple_repeat 2 76 0 213 154 0 0 chr5 29779101 29779140 -169851010 + (TATAA)n Simple_repeat Simple_repeat 4 42 0 2625 271 48 40 chr5 29779235 29780226 -169849924 + L1MC2 LINE L1 16 1014 -5528 5281 246 52 23 chr5 29780229 29783308 -169846842 + L1MC2 LINE L1 3659 6819 -23 2462 280 90 24 chr5 29783300 29784700 -169845450 + L1M4 LINE L1 3330 4822 -1324 * 362 219 83 10 chr5 29784701 29784797 -169845353 + MLT2B2 LTR ERVL 2 104 -411 254 262 35 43 chr5 29785130 29785271 -169844879 + THE1C LTR MaLR 236 375 0 10353 249 30 19 chr5 29785285 29789837 -169840313 - L1PA13 LINE L1 -1980 4817 2 357 200 51 126 chr5 29789872 29790047 -169840103 + LTR52 LTR ERVL 256 417 -4 27 62 0 0 chr5 29790239 29790287 -169839863 + AT_rich Low_complexity Low_complexity 1 48 0 26 64 0 0 chr5 29791207 29791254 -169838896 + AT_rich Low_complexity Low_complexity 1 47 0 293 194 174 0 chr5 29791385 29791483 -169838667 - L1MC4 LINE L1 -14 8028 7914 237 129 43 29 chr5 29791490 29791560 -169838590 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 7958 189 24 5 chr5 29791819 29794248 -169835902 - L1PA13 LINE L1 -10 6153 3686 1341 197 7 7 chr5 29794248 29794532 -169835618 - L1 LINE L1 -1326 4820 4537 286 301 68 28 chr5 29794579 29794755 -169835395 - L1M4 LINE L1 -1419 4727 4545 361 275 70 12 chr5 29794760 29794931 -169835219 - L1M4 LINE L1 -1553 4593 4413 201 222 0 22 chr5 29795144 29795189 -169834961 + (TA)n Simple_repeat Simple_repeat 1 44 0 665 298 114 41 chr5 29795203 29795314 -169834836 - L1M4 LINE L1 -1817 4329 4228 1565 205 3 0 chr5 29795314 29795602 -169834548 + AluJb SINE Alu 3 291 -21 665 298 114 41 chr5 29795602 29796147 -169834003 - L1M4 LINE L1 -1918 4228 3625 650 250 159 49 chr5 29796179 29796898 -169833252 - L1M4 LINE L1 -2692 3454 2657 312 191 16 0 chr5 29797657 29797720 -169832430 - MLT1G1 LTR MaLR -16 579 516 402 352 42 26 chr5 29798292 29798602 -169831548 - L1MEc LINE L1 -6009 387 73 328 250 0 0 chr5 29798645 29798721 -169831429 + L2 LINE L2 2404 2479 -835 410 297 99 24 chr5 29798947 29799240 -169830910 + L2 LINE L2 2938 3252 -61 1821 212 52 63 chr5 29799324 29799941 -169830209 - LTR65 LTR ERV1 -57 612 3 1627 138 51 0 chr5 29800052 29800305 -169829845 + AluSg SINE Alu 44 309 -1 22 56 0 0 chr5 29800305 29800341 -169829809 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr5 29800371 29800404 -169829746 + AT_rich Low_complexity Low_complexity 1 33 0 2172 101 7 0 chr5 29801155 29801453 -169828697 + AluSx SINE Alu 5 304 -8 1430 212 59 52 chr5 29802249 29802674 -169827476 + MSTC LTR MaLR 1 428 0 2317 202 96 2 chr5 29803004 29803505 -169826645 - MER44D DNA MER2_type -1 604 2 345 245 59 10 chr5 29804982 29805084 -169825066 - MLT1E LTR MaLR -8 585 479 317 169 0 145 chr5 29805088 29805212 -169824938 + L1M4 LINE L1 2780 2885 -3261 2216 278 78 2 chr5 29805240 29806195 -169823955 + L1M4 LINE L1 2110 3137 -3009 26 50 0 0 chr5 29806646 29806686 -169823464 + AT_rich Low_complexity Low_complexity 1 40 0 1029 236 63 53 chr5 29806802 29807131 -169823019 - L1ME3A LINE L1 -180 5990 5655 324 0 0 0 chr5 29807131 29807167 -169822983 + (TG)n Simple_repeat Simple_repeat 2 37 0 1029 236 63 53 chr5 29807167 29807235 -169822915 - L1ME3A LINE L1 -515 5655 5589 223 274 96 67 chr5 29807442 29807676 -169822474 + L2 LINE L2 2929 3216 -97 285 359 0 62 chr5 29807824 29807969 -169822181 + MIR SINE MIR 26 161 -101 2149 114 0 0 chr5 29808312 29808610 -169821540 - AluSg SINE Alu 0 310 13 3334 109 6 0 chr5 29808661 29809156 -169820994 - L1MA1 LINE L1 -1 6301 5804 978 223 47 37 chr5 29809281 29809581 -169820569 - L1MB8 LINE L1 -173 6005 5703 724 214 13 13 chr5 29809656 29809815 -169820335 - L1MB8 LINE L1 -1981 4165 4007 23 33 0 0 chr5 29810236 29810266 -169819884 + AT_rich Low_complexity Low_complexity 1 30 0 404 318 33 14 chr5 29810364 29810578 -169819572 - LTR16A1 LTR ERVL 0 457 240 22 0 0 0 chr5 29810880 29810902 -169819248 + AT_rich Low_complexity Low_complexity 1 22 0 351 218 0 79 chr5 29812514 29812615 -169817535 - MIR SINE MIR -3 259 167 1629 184 21 91 chr5 29812801 29813220 -169816930 - MLT1B LTR MaLR 0 390 1 1914 134 57 33 chr5 29813415 29813781 -169816369 + THE1C LTR MaLR 1 375 0 1524 233 46 35 chr5 29813822 29813966 -169816184 - MLT1C LTR MaLR 0 467 326 2024 117 7 3 chr5 29813966 29814264 -169815886 + AluSc SINE Alu 3 301 -8 1524 233 46 35 chr5 29814264 29814309 -169815841 - MLT1C LTR MaLR -141 326 283 311 0 0 25 chr5 29814309 29814349 -169815801 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1524 233 46 35 chr5 29814349 29814618 -169815532 - MLT1C LTR MaLR -184 283 3 865 267 22 13 chr5 29814731 29814956 -169815194 + MLT1A1 LTR MaLR 139 365 0 24 32 0 0 chr5 29815165 29815196 -169814954 + AT_rich Low_complexity Low_complexity 1 31 0 1933 128 3 20 chr5 29815412 29815716 -169814434 + AluSg SINE Alu 4 302 -8 1999 119 0 12 chr5 29866252 29866589 -169763561 + L1PA2 LINE L1 5821 6153 -2 1358 355 90 42 chr5 29867969 29868840 -169761310 - ERVL LTR ERVL -1384 4380 3422 2344 49 0 40 chr5 29868840 29869164 -169760986 + AluY SINE Alu 1 311 0 1358 355 90 42 chr5 29869164 29869612 -169760538 - ERVL LTR ERVL -2342 3422 2997 388 324 54 10 chr5 29869692 29869896 -169760254 - ERVL LTR ERVL -2640 2845 2633 401 343 53 46 chr5 29869955 29870389 -169759761 - ERVL LTR ERVL -3201 2563 2127 302 256 0 61 chr5 29870952 29871034 -169759116 + LTR16B LTR ERVL 96 172 -292 1720 201 24 26 chr5 29871046 29871617 -169758533 - L1M2 LINE L1 -743 5403 4941 1045 166 18 14 chr5 29871630 29871853 -169758297 + L1M1 LINE L1 5300 5523 -777 2082 252 106 98 chr5 29871871 29872367 -169757783 - L1MD3 LINE L1 -1 7994 7504 264 279 115 0 chr5 29872367 29872471 -169757679 - MLT1F1 LTR MaLR -447 120 5 2082 252 106 98 chr5 29872471 29873563 -169756587 - L1MD3 LINE L1 -491 7504 6211 910 200 0 54 chr5 29873593 29873798 -169756352 - AluJo SINE Alu -24 288 95 1997 240 99 46 chr5 29873816 29874045 -169756105 - L1MD3 LINE L1 -746 5400 5185 2380 215 49 9 chr5 29874045 29874537 -169755613 + MLT2B3 LTR ERVL 1 517 -37 990 55 20 0 chr5 29874537 29874683 -169755467 + (TCTA)n Simple_repeat Simple_repeat 4 152 0 2380 215 49 9 chr5 29874683 29874721 -169755429 + MLT2B3 LTR ERVL 517 552 -2 1997 240 99 46 chr5 29874721 29874889 -169755261 - L1MD3 LINE L1 -961 5185 5027 1633 199 0 26 chr5 29874889 29875195 -169754955 - AluJo SINE Alu -12 300 3 1997 240 99 46 chr5 29875195 29876107 -169754043 - L1MD3 LINE L1 -1119 5027 4356 1939 191 54 5 chr5 29876115 29876560 -169753590 - L1MA8 LINE L1 -8 6283 5817 2939 177 8 2 chr5 29876561 29877170 -169752980 + L1MA8 LINE L1 5182 5793 -498 192 77 0 0 chr5 29877174 29877200 -169752950 + (CA)n Simple_repeat Simple_repeat 1 26 0 290 121 99 0 chr5 29877214 29877305 -169752845 + (TTATA)n Simple_repeat Simple_repeat 1 100 0 1206 187 17 0 chr5 29877306 29877536 -169752614 - L1MC1 LINE L1 -12 6321 6088 319 384 8 8 chr5 29878103 29878348 -169751802 - MER70-int LTR ERVL -348 4675 4431 956 276 10 3 chr5 29880347 29880640 -169749510 - L1MD3 LINE L1 -3335 2811 2517 270 319 43 58 chr5 29881494 29881682 -169748468 + MLT1I LTR MaLR 104 288 -121 297 214 0 0 chr5 29881745 29881801 -169748349 - L1 LINE L1 -1045 5101 5046 1258 231 13 7 chr5 29881816 29882114 -169748036 - L1 LINE L1 -1154 4992 4693 3760 176 16 7 chr5 29882122 29882853 -169747297 - L1MA6 LINE L1 0 6300 5563 22 35 0 0 chr5 29882905 29882934 -169747216 + AT_rich Low_complexity Low_complexity 1 29 0 1589 203 64 11 chr5 29882947 29883587 -169746563 + L1MA10 LINE L1 3256 3917 -3648 748 44 0 0 chr5 29885165 29885256 -169744894 + MER85 DNA T2_type 44 134 -5 659 218 57 0 chr5 29885256 29885449 -169744701 + L1MA10 LINE L1 4628 4831 -2734 4303 204 21 42 chr5 29885486 29886692 -169743458 + L1MA10 LINE L1 6526 7716 -37 1861 158 0 32 chr5 29887428 29887739 -169742411 - AluSx SINE Alu -11 301 1 185 192 0 19 chr5 29887885 29887937 -169742213 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 43 35 0 0 chr5 29887943 29888000 -169742150 + AT_rich Low_complexity Low_complexity 1 57 0 335 335 30 12 chr5 29888082 29888246 -169741904 + MLT1I LTR MaLR 121 287 -122 224 348 43 12 chr5 29891898 29892059 -169738091 - MIR SINE MIR -46 216 51 276 91 0 0 chr5 29893057 29893101 -169737049 + (TG)n Simple_repeat Simple_repeat 2 45 0 255 419 105 19 chr5 29893502 29893827 -169736323 + L2 LINE L2 2916 3268 -4 415 315 40 47 chr5 29894492 29894641 -169735509 - MIR SINE MIR -113 149 2 180 125 0 0 chr5 29896154 29896186 -169733964 + (CA)n Simple_repeat Simple_repeat 1 32 0 195 307 89 10 chr5 29896662 29896763 -169733387 - MIR SINE MIR -122 140 32 386 282 98 17 chr5 29897612 29897786 -169732364 + MIR SINE MIR 73 260 -2 240 59 0 0 chr5 29898189 29898223 -169731927 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 23 55 0 18 chr5 29898851 29898887 -169731263 + AT_rich Low_complexity Low_complexity 1 37 -17 2138 102 3 23 chr5 29898887 29899191 -169730959 - AluSq SINE Alu -15 298 1 23 55 0 18 chr5 29899191 29899209 -169730941 + AT_rich Low_complexity Low_complexity 37 54 0 322 291 18 0 chr5 29899567 29899677 -169730473 - L1M4 LINE L1 -1537 4609 4498 1194 247 85 14 chr5 29899809 29900173 -169729977 + MLT1B LTR MaLR 1 390 0 352 195 13 0 chr5 29900251 29900328 -169729822 - L1PA16 LINE L1 0 6166 6089 966 269 71 68 chr5 29901027 29901276 -169728874 - L1ME3A LINE L1 -5 6165 5918 2107 205 35 55 chr5 29901276 29901841 -169728309 + MLT2B3 LTR ERVL 1 554 0 966 269 71 68 chr5 29901841 29902263 -169727887 - L1ME3A LINE L1 -252 5918 5492 533 26 105 0 chr5 29902273 29902349 -169727801 - L1PA4 LINE L1 -3 6152 6069 489 65 0 0 chr5 29902349 29902411 -169727739 + L1PA3 LINE L1 6009 6070 -85 23 0 0 0 chr5 29904368 29904391 -169725759 + AT_rich Low_complexity Low_complexity 1 23 0 226 272 78 42 chr5 29904420 29904611 -169725539 - L1M3 LINE L1 -666 5514 5317 541 323 54 27 chr5 29904894 29905188 -169724962 + MLT1G1 LTR MaLR 9 310 -285 282 51 0 0 chr5 29905190 29905229 -169724921 - MADE1 DNA Mariner 0 80 42 1855 144 0 0 chr5 29905810 29906081 -169724069 + AluSg SINE Alu 1 271 -39 356 266 89 47 chr5 29906121 29906335 -169723815 - L1M4 LINE L1 -1712 4434 4212 1245 215 61 25 chr5 29906381 29906660 -169723490 + AluJo SINE Alu 1 289 -13 35 24 0 0 chr5 29906869 29906911 -169723239 + AT_rich Low_complexity Low_complexity 1 42 0 206 222 0 0 chr5 29907465 29907501 -169722649 + (CACG)n Simple_repeat Simple_repeat 3 38 0 484 333 11 6 chr5 29907629 29907806 -169722344 - MER5B DNA MER1_type 0 178 1 22 0 0 0 chr5 29908608 29908630 -169721520 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr5 29908753 29908802 -169721348 + AT_rich Low_complexity Low_complexity 1 49 0 2004 249 30 14 chr5 29909528 29910026 -169720124 + LTR53 LTR ERVL 14 519 0 1040 192 0 0 chr5 29910176 29910379 -169719771 + L1PA15 LINE L1 4697 4899 -1247 2081 140 27 30 chr5 29910379 29910744 -169719406 - THE1B LTR MaLR 0 364 1 5897 126 0 2 chr5 29910744 29911578 -169718572 - THE1B-int LTR MaLR 0 1580 749 245 75 25 25 chr5 29911837 29911877 -169718273 - THE1B LTR MaLR -324 40 1 4773 184 19 34 chr5 29911877 29913176 -169716974 + L1PA15 LINE L1 4895 6162 -3 1044 182 35 13 chr5 29913944 29914175 -169715975 - L1M3 LINE L1 -365 5803 5568 652 232 57 0 chr5 29914172 29914349 -169715801 + L1MB1 LINE L1 5865 6051 -117 * 14713 228 38 12 chr5 29914369 29919530 -169710620 + L1PA13 LINE L1 2 5501 -1296 4104 136 3 10 chr5 29919537 29920153 -169709997 - LTR9 LTR ERV1 0 612 1 11644 156 10 37 chr5 29920156 29922240 -169707910 - HUERS-P3 LTR ERV1 -4 8915 6889 6520 149 29 9 chr5 29922234 29923290 -169706860 - HUERS-P3 LTR ERV1 -2264 6655 5579 * 306 345 69 32 chr5 29923638 29923884 -169706266 - L1MEd LINE L1 -5595 524 270 2175 105 0 3 chr5 29923950 29924244 -169705906 + AluSq SINE Alu 1 293 -20 31 0 0 0 chr5 29924244 29924275 -169705875 + AT_rich Low_complexity Low_complexity 1 31 0 414 0 0 0 chr5 29924398 29924444 -169705706 + (TG)n Simple_repeat Simple_repeat 2 47 0 1288 199 55 55 chr5 29924491 29924852 -169705298 - MLT1A1 LTR MaLR 0 365 5 1021 93 0 7 chr5 29924896 29925035 -169705115 + AluSp/q SINE Alu 166 303 -10 27 0 0 0 chr5 29925035 29925062 -169705088 + AT_rich Low_complexity Low_complexity 1 27 0 2787 206 48 13 chr5 29925612 29926298 -169703852 - MER67C LTR ERV1 0 710 1 2367 75 0 10 chr5 29926535 29926840 -169703310 - AluY SINE Alu -9 302 1 606 266 116 10 chr5 29927607 29927814 -169702336 + Charlie1b DNA MER1_type 7 235 -288 717 249 23 0 chr5 29927814 29928031 -169702119 + MER33 DNA MER1_type 1 222 -102 2377 147 25 23 chr5 29928236 29928677 -169701473 - LTR56 LTR ERV1 -3 442 1 5066 180 51 76 chr5 29928734 29930334 -169699816 - LTR49-int LTR ERV1 -1377 3746 2100 1788 149 59 0 chr5 29930334 29930623 -169699527 - AluSg SINE Alu -4 306 1 5066 180 51 76 chr5 29930623 29931009 -169699141 - LTR49-int LTR ERV1 -3023 2100 1706 355 299 9 9 chr5 29931128 29931235 -169698915 - LTR49-int LTR ERV1 -2884 3447 3341 3832 230 36 36 chr5 29931277 29932722 -169697428 - LTR49-int LTR ERV1 -2994 3337 1894 1497 185 34 24 chr5 29932722 29933019 -169697131 - AluJo SINE Alu -11 301 2 3832 230 36 36 chr5 29933019 29933049 -169697101 - LTR49-int LTR ERV1 -4437 1894 1866 2423 88 3 3 chr5 29933049 29933357 -169696793 - AluSx SINE Alu -4 308 1 3832 230 36 36 chr5 29933357 29933467 -169696683 - LTR49-int LTR ERV1 -4465 1866 1673 244 183 21 0 chr5 29933484 29933577 -169696573 + (TA)n Simple_repeat Simple_repeat 2 96 0 667 162 22 31 chr5 29933612 29933802 -169696348 - LTR49-int LTR ERV1 -4670 1661 1001 380 225 14 0 chr5 29933843 29933914 -169696236 - tRNA-Glu-GAG tRNA tRNA -2 73 2 304 274 12 12 chr5 29933955 29934039 -169696111 - LTR49-int LTR ERV1 -5132 1199 1116 345 184 79 0 chr5 29934157 29934233 -169695917 - LTR49-int LTR ERV1 -3670 1201 1120 297 250 25 25 chr5 29934277 29934357 -169695793 - MER57A LTR ERV1 -40 363 284 947 136 142 0 chr5 29934460 29934629 -169695521 + MSTA LTR MaLR 236 428 0 1243 260 81 50 chr5 29935404 29935908 -169694242 + MLT1E LTR MaLR 72 591 -2 32 43 0 0 chr5 29936218 29936264 -169693886 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr5 29936306 29936327 -169693823 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr5 29936649 29936686 -169693464 + AT_rich Low_complexity Low_complexity 1 37 0 1859 177 94 31 chr5 29937091 29937504 -169692646 - Tigger2 DNA MER2_type 0 2718 2280 291 261 0 0 chr5 29937502 29937567 -169692583 - Tigger2 DNA MER2_type -2649 69 5 * 33 25 0 0 chr5 29938226 29938266 -169691884 + AT_rich Low_complexity Low_complexity 1 40 0 212 271 176 41 chr5 29939006 29939176 -169690974 - L2 LINE L2 -836 2478 2286 30 0 0 0 chr5 29939477 29939507 -169690643 + AT_rich Low_complexity Low_complexity 1 30 0 223 303 8 42 chr5 29939617 29939736 -169690414 - L2 LINE L2 -541 2773 2659 1684 141 60 43 chr5 29939882 29940251 -169689899 - THE1C LTR MaLR 0 375 1 432 82 0 0 chr5 29940837 29940898 -169689252 + (CA)n Simple_repeat Simple_repeat 2 62 0 352 321 48 96 chr5 29941040 29941395 -169688755 - MLT1J1 LTR MaLR -44 402 65 185 276 92 11 chr5 29941488 29941575 -169688575 + MIR SINE MIR 124 217 -45 24 32 0 0 chr5 29942720 29942751 -169687399 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr5 29943252 29943279 -169686871 + AT_rich Low_complexity Low_complexity 1 27 0 2152 109 0 10 chr5 29943534 29943838 -169686312 + AluSq SINE Alu 1 301 -12 711 235 207 22 chr5 29944139 29944462 -169685688 - L1ME1 LINE L1 -44 6122 5740 964 92 0 157 chr5 29945671 29945900 -169684250 + 7SK RNA RNA 1 193 0 25 90 0 0 chr5 29945908 29945975 -169684175 + AT_rich Low_complexity Low_complexity 1 67 0 1897 233 61 38 chr5 29945979 29946456 -169683694 - MER70B LTR ERVL -1 577 90 737 229 13 6 chr5 29946452 29946609 -169683541 - MER70A LTR ERVL -310 162 5 * 1532 268 29 29 chr5 29946613 29947125 -169683025 - L1MD2 LINE L1 -34 6325 5814 1022 254 150 31 chr5 29947948 29948302 -169681848 + MSTD LTR MaLR 1 396 0 237 278 40 48 chr5 29948302 29948411 -169681739 + MLT1F1 LTR MaLR 92 199 -343 1203 231 128 14 chr5 29948430 29948781 -169681369 + MLT1F1 LTR MaLR 177 567 0 615 332 22 25 chr5 29948932 29949287 -169680863 + MLT1F1-int LTR MaLR 248 601 -770 482 301 112 39 chr5 29949659 29949945 -169680205 + L2 LINE L2 2537 2843 -471 180 0 0 0 chr5 29950289 29950309 -169679841 + (TAA)n Simple_repeat Simple_repeat 2 21 0 679 270 44 14 chr5 29950441 29950757 -169679393 - MER93b LTR ERV1 -1 372 15 809 130 0 0 chr5 29950915 29951030 -169679120 - AluSq/x SINE Alu -198 115 1 677 117 0 0 chr5 29951038 29951141 -169679009 - AluSp/q SINE Alu -2 311 209 29 78 0 0 chr5 29951160 29951224 -169678926 + AT_rich Low_complexity Low_complexity 1 64 0 912 227 65 47 chr5 29952717 29953100 -169677050 - MLT1B LTR MaLR 0 390 1 1293 293 89 13 chr5 29954134 29954655 -169675495 + MLT1E LTR MaLR 15 591 -2 953 273 13 61 chr5 29954763 29955159 -169674991 + MLT2C1 LTR ERVL 18 394 -3 546 332 42 24 chr5 29955162 29955647 -169674503 + HERVL-C1 LTR ERVL 1 511 -5253 24 67 0 0 chr5 29955768 29955813 -169674337 + AT_rich Low_complexity Low_complexity 1 45 0 15072 184 41 5 chr5 29956065 29958868 -169671282 + L1M1 LINE L1 15 2921 -4644 315 0 0 0 chr5 29958868 29958903 -169671247 + (CAA)n Simple_repeat Simple_repeat 2 36 0 15072 184 41 5 chr5 29958903 29958929 -169671221 + L1M1 LINE L1 2921 2945 -4620 2395 189 104 21 chr5 29958929 29959583 -169670567 - LTR28 LTR ERV1 -3 633 1 3454 186 47 54 chr5 29959583 29960051 -169670099 + L1M1 LINE L1 2877 3347 -4218 1656 169 7 27 chr5 29960051 29960347 -169669803 + AluSx SINE Alu 1 290 -22 3454 186 47 54 chr5 29960347 29961320 -169668830 + L1M1 LINE L1 3347 4316 -3249 416 106 0 0 chr5 29961321 29961387 -169668763 + L1M LINE L1 5265 5330 -974 645 107 18 9 chr5 29961387 29961499 -169668651 + L1MA3 LINE L1 6188 6300 -5 569 299 44 13 chr5 29962150 29962437 -169667713 + L1ME1 LINE L1 4760 5063 -1083 2934 210 30 7 chr5 29962483 29963216 -169666934 + L1PA13 LINE L1 2264 3013 -3133 9727 203 6 3 chr5 29963217 29966159 -169663991 + L1PA13 LINE L1 3230 6152 -11 1366 278 79 27 chr5 29966295 29967124 -169663026 + L1ME1 LINE L1 5209 6078 -88 1498 332 66 16 chr5 29967430 29968217 -169661933 - HERVL LTR ERVL -1128 4526 3701 321 261 134 7 chr5 29968341 29968483 -169661667 + L1MA5 LINE L1 4294 4453 -1693 755 176 152 0 chr5 29968750 29968868 -169661282 + MER3 DNA MER1_type 12 163 -46 233 29 29 0 chr5 29968868 29968902 -169661248 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 755 176 152 0 chr5 29968902 29968948 -169661202 + MER3 DNA MER1_type 163 201 -8 331 306 67 78 chr5 29969202 29969373 -169660777 + MLT1H LTR MaLR 71 240 -309 2260 224 22 4 chr5 29969373 29969837 -169660313 - MER70A LTR ERVL 0 472 1 331 306 67 78 chr5 29969837 29969920 -169660230 + MLT1H LTR MaLR 240 322 -227 511 240 24 0 chr5 29970083 29970208 -169659942 + MLT1H LTR MaLR 420 547 -2 3973 213 42 0 chr5 29970246 29971078 -169659072 - L1 LINE L1 -1980 4166 3300 5051 156 26 64 chr5 29971081 29972306 -169657844 + L1MA5 LINE L1 5119 6299 -1 812 195 12 35 chr5 29972818 29972987 -169657163 + FAM SINE Alu 1 165 -10 252 0 0 0 chr5 29973420 29973448 -169656702 + (CA)n Simple_repeat Simple_repeat 1 28 0 392 284 37 43 chr5 29973452 29973711 -169656439 - MLT1I LTR MaLR -88 321 72 21 0 0 0 chr5 29974762 29974783 -169655367 + AT_rich Low_complexity Low_complexity 1 21 0 188 184 11 58 chr5 29975018 29975105 -169655045 + GA-rich Low_complexity Low_complexity 1 83 0 1105 196 19 169 chr5 29975945 29976271 -169653879 - MLT1C LTR MaLR -30 437 214 2160 118 0 3 chr5 29976271 29976585 -169653565 - AluSq SINE Alu 0 313 1 1105 196 19 169 chr5 29976585 29976772 -169653378 - MLT1C LTR MaLR -253 214 1 2099 132 3 7 chr5 29976946 29977256 -169652894 + AluSq SINE Alu 3 311 -2 23 78 0 0 chr5 29977296 29977347 -169652803 + AT_rich Low_complexity Low_complexity 1 51 0 305 241 46 0 chr5 29978015 29978102 -169652048 + L1MC4 LINE L1 6613 6703 -1339 1457 180 0 73 chr5 29978161 29978478 -169651672 - AluJo SINE Alu -16 296 3 284 355 69 10 chr5 29978479 29978682 -169651468 + L2 LINE L2 2539 2753 -561 250 406 23 33 chr5 29978784 29978998 -169651152 + L2 LINE L2 2852 3063 -209 790 292 13 45 chr5 29980090 29980398 -169649752 - HAL1 LINE L1 -2209 298 1 861 260 15 5 chr5 29980428 29980632 -169649518 - MER58A DNA MER1_type -3 221 16 239 176 0 15 chr5 29980749 29980817 -169649333 + CT-rich Low_complexity Low_complexity 2 68 0 189 94 0 0 chr5 29980817 29980849 -169649301 + (CA)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr5 29982002 29982027 -169648123 + (T)n Simple_repeat Simple_repeat 1 25 0 513 124 47 0 chr5 29982808 29982937 -169647213 + (TA)n Simple_repeat Simple_repeat 2 136 0 1750 156 0 14 chr5 29983066 29983361 -169646789 + AluSx SINE Alu 6 296 -16 1688 144 101 23 chr5 29983627 29983975 -169646175 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 29984265 29984287 -169645863 + AT_rich Low_complexity Low_complexity 1 22 0 547 266 14 50 chr5 29984385 29984607 -169645543 - MER20 DNA MER1_type -1 218 5 21 0 0 0 chr5 29984936 29984957 -169645193 + AT_rich Low_complexity Low_complexity 1 21 0 205 340 26 85 chr5 29987653 29987806 -169642344 - MER5B DNA MER1_type -23 155 12 1131 288 78 17 chr5 29988929 29989405 -169640745 - L1ME1 LINE L1 -15 6151 5647 300 348 77 25 chr5 29990176 29990538 -169639612 - L2 LINE L2 -974 2340 1960 257 222 278 11 chr5 29990584 29990674 -169639476 + MER34 LTR ERV1 9 122 -420 * 1362 261 68 14 chr5 29990651 29991076 -169639074 + MER39 LTR ERV1 260 707 0 646 233 39 28 chr5 29991402 29991582 -169638568 + MER5A DNA MER1_type 3 184 -5 24 32 0 0 chr5 29993772 29993803 -169636347 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr5 29994155 29994178 -169635972 + AT_rich Low_complexity Low_complexity 1 23 0 249 267 27 0 chr5 29994258 29994333 -169635817 + (TA)n Simple_repeat Simple_repeat 1 77 0 365 305 28 42 chr5 29994712 29994925 -169635225 + Charlie7 DNA MER1_type 312 521 -2091 * 425 271 0 0 chr5 29994922 29995040 -169635110 + Charlie7 DNA MER1_type 1722 1839 -773 263 298 153 15 chr5 29995068 29995199 -169634951 - LTR16A LTR ERVL 0 450 302 21 0 0 0 chr5 29995386 29995407 -169634743 + AT_rich Low_complexity Low_complexity 1 21 0 1915 155 0 16 chr5 29995447 29995764 -169634386 - AluSx SINE Alu 0 312 1 246 338 52 34 chr5 29996224 29996493 -169633657 + HAL1 LINE L1 45 318 -2189 875 315 52 65 chr5 29996536 29996576 -169633574 + L1MCb LINE L1 16 55 -5990 2104 78 0 0 chr5 29996576 29996845 -169633305 + AluY SINE Alu 43 311 0 875 315 52 65 chr5 29996845 29997356 -169632794 + L1MCb LINE L1 55 560 -5485 2321 265 95 40 chr5 29997443 29998138 -169632012 + L1MCb LINE L1 573 1228 -5336 2026 113 9 50 chr5 29998138 29998458 -169631692 + AluSx SINE Alu 1 307 -5 2321 265 95 40 chr5 29998458 30000333 -169629817 + L1MCb LINE L1 1228 3330 -3234 886 266 166 10 chr5 30000346 30000647 -169629503 - MSTD LTR MaLR -48 348 1 41 0 0 0 chr5 30001760 30001801 -169628349 + AT_rich Low_complexity Low_complexity 1 41 0 8406 65 3 2 chr5 30002042 30003112 -169627038 + MER11C LTR ERVK 1 1071 0 296 315 0 0 chr5 30003261 30003350 -169626800 - L1ME4a LINE L1 -70 6051 5963 827 196 17 17 chr5 30003897 30004070 -169626080 + AluSc SINE Alu 131 303 -6 961 223 109 8 chr5 30004470 30004902 -169625248 + MLT1D LTR MaLR 7 505 0 367 313 71 0 chr5 30005404 30005602 -169624548 - HAL1 LINE L1 -741 1766 1555 323 236 24 149 chr5 30005883 30006179 -169623971 - L1MEd LINE L1 -5050 1069 811 25 0 0 0 chr5 30006798 30006823 -169623327 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 30006955 30006977 -169623173 + AT_rich Low_complexity Low_complexity 1 22 0 2335 113 3 6 chr5 30008996 30009341 -169620809 - MER9 LTR ERVK 0 511 168 6378 27 0 0 chr5 30009341 30010086 -169620064 - L1P LINE L1 -1890 4256 3512 7699 20 2 0 chr5 30010091 30011191 -169618959 + L1PA2 LINE L1 5054 6155 0 1353 98 5 0 chr5 30011191 30011379 -169618771 - MER9 LTR ERVK -322 189 1 648 249 88 19 chr5 30011917 30012122 -169618028 - MIR SINE MIR -32 230 12 29 0 0 0 chr5 30013398 30013427 -169616723 + AT_rich Low_complexity Low_complexity 1 29 0 256 237 17 0 chr5 30013896 30013955 -169616195 + MIR SINE MIR 167 226 -36 1354 289 26 18 chr5 30014712 30015259 -169614891 + L1MA10 LINE L1 1563 2113 -4917 1209 128 20 15 chr5 30015262 30015466 -169614684 + THE1C LTR MaLR 171 375 0 890 252 40 29 chr5 30015466 30015794 -169614356 + L1MA10 LINE L1 4300 4633 -2473 * 3117 223 123 16 chr5 30015772 30015846 -169614304 + L1MA10 LINE L1 6180 6245 -1049 204 40 0 0 chr5 30015846 30015871 -169614279 + (TAA)n Simple_repeat Simple_repeat 2 26 0 3117 223 123 16 chr5 30015871 30016759 -169613391 + L1MA10 LINE L1 6245 7239 -55 22 88 0 0 chr5 30016765 30016822 -169613328 + AT_rich Low_complexity Low_complexity 1 57 0 13880 215 38 11 chr5 30017117 30019571 -169610579 + L1PB1 LINE L1 6 2391 -4476 199 70 23 23 chr5 30019571 30019614 -169610536 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 13880 215 38 11 chr5 30019614 30022236 -169607914 + L1PB1 LINE L1 2391 5487 -1380 246 32 0 0 chr5 30022236 30022267 -169607883 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 13880 215 38 11 chr5 30022267 30023208 -169606942 + L1PB1 LINE L1 5487 6401 -466 1733 139 89 13 chr5 30023252 30023568 -169606582 + L1PB1 LINE L1 6528 6867 0 254 381 13 13 chr5 30023826 30023981 -169606169 + MLT1J LTR MaLR 3 157 -354 286 216 45 82 chr5 30024104 30024238 -169605912 + MLT1J LTR MaLR 329 457 -54 1969 137 39 41 chr5 30024368 30024694 -169605456 - L1MA5A LINE L1 -3 6294 5968 2266 88 7 0 chr5 30024694 30024990 -169605160 - AluSp SINE Alu -13 300 3 1969 137 39 41 chr5 30024990 30025078 -169605072 - L1MA5A LINE L1 -329 5968 5881 24 32 0 0 chr5 30025672 30025703 -169604447 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 30026381 30026417 -169603733 + AT_rich Low_complexity Low_complexity 1 36 0 1530 198 21 43 chr5 30026752 30027125 -169603025 + MLT1A1 LTR MaLR 1 365 0 193 320 13 13 chr5 30027422 30027497 -169602653 + L2 LINE L2 3223 3297 -16 4603 221 64 21 chr5 30030054 30031391 -169598759 + L1MA9 LINE L1 3429 4822 -1324 1647 165 58 16 chr5 30031408 30031717 -169598433 + THE1C LTR MaLR 54 375 0 9230 130 40 38 chr5 30031717 30033291 -169596859 + THE1C-int LTR MaLR 1 1577 -3 1852 159 61 19 chr5 30033294 30033653 -169596497 + THE1C LTR MaLR 1 374 -1 3699 208 23 45 chr5 30033653 30035140 -169595010 + L1MA9 LINE L1 4816 6272 -40 22 0 0 0 chr5 30035140 30035162 -169594988 + AT_rich Low_complexity Low_complexity 1 22 0 2992 167 0 34 chr5 30035449 30035976 -169594174 - HSMAR2 DNA Mariner -395 907 399 1478 228 3 10 chr5 30035977 30036275 -169593875 + AluJb SINE Alu 17 312 0 719 104 9 0 chr5 30036283 30036398 -169593752 + (GGAA)n Simple_repeat Simple_repeat 1 116 0 1611 162 94 0 chr5 30036402 30036730 -169593420 - HSMAR2 DNA Mariner -910 392 34 3989 192 108 24 chr5 30038507 30039994 -169590156 + MER52A LTR ERV1 1 1755 0 2107 110 7 16 chr5 30040623 30040933 -169589217 + AluSq SINE Alu 1 307 -6 191 176 27 27 chr5 30041358 30041432 -169588718 + GA-rich Low_complexity Low_complexity 2 75 0 438 231 0 0 chr5 30041649 30041727 -169588423 + AluJ/FLAM SINE Alu 1 78 -234 458 259 181 0 chr5 30042828 30042994 -169587156 + MIR SINE MIR 67 262 0 799 263 86 97 chr5 30043840 30044433 -169585717 + MER49 LTR ERV1 10 733 -110 2030 132 48 28 chr5 30044433 30044788 -169585362 - THE1B LTR MaLR -2 362 1 799 263 86 97 chr5 30044788 30044897 -169585253 + MER49 LTR ERV1 733 842 -1 1118 214 84 72 chr5 30045336 30045835 -169584315 - MLT1D LTR MaLR 0 505 1 23 33 0 0 chr5 30046425 30046455 -169583695 + AT_rich Low_complexity Low_complexity 1 30 0 465 304 75 40 chr5 30046547 30046748 -169583402 - MIR SINE MIR -21 241 34 21 0 0 0 chr5 30046877 30046898 -169583252 + AT_rich Low_complexity Low_complexity 1 21 0 1071 294 65 18 chr5 30047196 30047533 -169582617 - MLT1E1 LTR MaLR -5 649 297 470 223 23 54 chr5 30047620 30047750 -169582400 - MLT1E1 LTR MaLR -528 126 1 1984 165 27 0 chr5 30048257 30048585 -169581565 + MER1B DNA MER1_type 1 337 0 298 248 113 43 chr5 30049926 30050067 -169580083 - MLT1H1 LTR MaLR 0 555 428 1006 257 143 55 chr5 30050242 30050861 -169579289 - L1M4 LINE L1 -1163 4983 4420 2149 109 3 0 chr5 30050861 30051154 -169578996 + AluSx SINE Alu 1 294 -18 1006 257 143 55 chr5 30051154 30051576 -169578574 - L1M4 LINE L1 -1726 4420 3850 267 277 34 14 chr5 30051883 30052031 -169578119 - L1M4 LINE L1 -3170 2976 2826 2623 144 33 7 chr5 30052071 30052522 -169577628 - L1MA3 LINE L1 -416 5889 5427 2328 118 3 26 chr5 30052521 30052901 -169577249 + L1MA3 LINE L1 5890 6260 -45 * 5998 92 10 12 chr5 30052901 30053274 -169576876 + L1PA8A LINE L1 4986 5358 -773 1862 80 108 31 chr5 30053274 30053562 -169576588 + AluY SINE Alu 1 310 -1 5998 92 10 12 chr5 30053562 30054330 -169575820 + L1PA8A LINE L1 5358 6128 -3 1212 194 84 35 chr5 30054353 30054637 -169575513 - AluJo SINE Alu -2 300 3 245 87 0 0 chr5 30054644 30054690 -169575460 + L1MA2 LINE L1 6259 6304 0 385 308 28 9 chr5 30054733 30054947 -169575203 - L1M4 LINE L1 -3332 2814 2597 3057 219 85 8 chr5 30054953 30055775 -169574375 - L1MC3 LINE L1 0 7785 6901 256 158 12 158 chr5 30055877 30055959 -169574191 - L1MC3 LINE L1 -954 6831 6762 946 241 25 59 chr5 30055967 30056287 -169573863 - L1MC3 LINE L1 -1174 6611 6303 * 1168 222 59 9 chr5 30056281 30056601 -169573549 - L1MC2 LINE L1 -350 5928 5593 1165 113 0 6 chr5 30056603 30056780 -169573370 - L1PA13 LINE L1 -3 6160 5985 3443 121 27 5 chr5 30056784 30057433 -169572717 - L1PA13 LINE L1 -356 5812 5151 2551 185 26 0 chr5 30057431 30057490 -169572660 + L1P LINE L1 4638 4694 -1452 * 347 0 0 23 chr5 30057490 30057534 -169572616 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2551 185 26 0 chr5 30057534 30057977 -169572173 + L1P LINE L1 4694 5153 -993 808 249 32 18 chr5 30057974 30058191 -169571959 - L1MC2 LINE L1 -2116 5603 5384 * 861 294 97 32 chr5 30058282 30059886 -169570264 - L1MC2 LINE L1 -3647 2433 720 9214 136 39 5 chr5 30060438 30061864 -169568286 - HUERS-P3 LTR ERV1 -3248 5671 4197 868 146 7 0 chr5 30061857 30061994 -169568156 + HUERS-P3 LTR ERV1 2372 2509 -6410 * 3290 142 20 2 chr5 30061994 30062551 -169567599 + L1PA13 LINE L1 5595 6161 -2 422 147 18 73 chr5 30062553 30062662 -169567488 + L1MB1 LINE L1 6044 6146 -22 363 96 0 0 chr5 30062673 30062725 -169567425 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 30 0 0 0 chr5 30063254 30063284 -169566866 + AT_rich Low_complexity Low_complexity 1 30 0 191 86 0 29 chr5 30063427 30063462 -169566688 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1467 152 6 107 chr5 30063903 30064231 -169565919 - AluSx SINE Alu -7 295 1 1924 160 36 30 chr5 30064361 30064723 -169565427 + THE1B LTR MaLR 1 364 0 40 0 0 0 chr5 30064799 30064839 -169565311 + AT_rich Low_complexity Low_complexity 1 40 0 322 221 149 39 chr5 30065173 30065327 -169564823 - L1MEc LINE L1 -3594 2970 2800 227 340 69 14 chr5 30065363 30065651 -169564499 - L1MEc LINE L1 -4324 2421 2118 312 301 25 70 chr5 30065873 30066072 -169564078 - L1MEc LINE L1 -5779 266 77 235 270 40 80 chr5 30066699 30066799 -169563351 + MIR SINE MIR 59 154 -108 1860 179 36 22 chr5 30067361 30067718 -169562432 + THE1B LTR MaLR 3 364 0 21 0 0 0 chr5 30068372 30068393 -169561757 + AT_rich Low_complexity Low_complexity 1 21 0 6448 124 2 0 chr5 30069015 30070014 -169560136 - L1PA7 LINE L1 -2122 4024 3024 9003 102 19 5 chr5 30070014 30070687 -169559463 + L1PA7 LINE L1 4022 4684 -1470 243 0 0 0 chr5 30070687 30070714 -169559436 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9003 102 19 5 chr5 30070714 30072145 -169558005 + L1PA7 LINE L1 4684 6152 -2 770 260 6 6 chr5 30072614 30072787 -169557363 - MLT1D LTR MaLR -48 457 285 2298 59 3 0 chr5 30072819 30073122 -169557028 + L1PA4 LINE L1 5846 6149 -6 42 48 0 0 chr5 30074742 30074805 -169555345 + AT_rich Low_complexity Low_complexity 1 63 0 265 335 99 38 chr5 30075234 30075446 -169554704 + L2 LINE L2 2312 2536 -778 180 0 0 0 chr5 30076018 30076038 -169554112 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1728 147 0 70 chr5 30076040 30076353 -169553797 - AluSx SINE Alu -21 291 1 394 294 84 19 chr5 30076364 30076578 -169553572 + LTR16B LTR ERVL 224 451 -13 318 359 27 22 chr5 30076897 30077081 -169553069 + MIR SINE MIR 46 230 -32 222 221 29 15 chr5 30077125 30077193 -169552957 + (TTA)n Simple_repeat Simple_repeat 1 69 0 2617 187 104 56 chr5 30077613 30078325 -169551825 + LTR1 LTR ERV1 40 785 0 23 33 0 0 chr5 30078434 30078464 -169551686 + AT_rich Low_complexity Low_complexity 1 30 0 205 171 0 0 chr5 30079267 30079308 -169550842 + CT-rich Low_complexity Low_complexity 2 42 0 21 0 0 0 chr5 30080722 30080743 -169549407 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr5 30081024 30081060 -169549090 + AT_rich Low_complexity Low_complexity 1 36 0 845 263 111 12 chr5 30081098 30081518 -169548632 + L1MC/D LINE L1 5161 5619 -740 2656 39 0 0 chr5 30082977 30083288 -169546862 - AluYb8 SINE Alu -5 313 3 249 258 23 17 chr5 30083295 30083400 -169546750 + A-rich Low_complexity Low_complexity 1 105 0 207 215 19 28 chr5 30083414 30083521 -169546629 + A-rich Low_complexity Low_complexity 4 109 0 302 315 0 0 chr5 30083573 30083681 -169546469 + A-rich Low_complexity Low_complexity 1 108 0 518 57 0 66 chr5 30083785 30083891 -169546259 + AluY SINE Alu 213 311 0 245 325 12 0 chr5 30083999 30084082 -169546068 - MIR SINE MIR -1 261 178 341 250 0 17 chr5 30084868 30084988 -169545162 + CT-rich Low_complexity Low_complexity 2 119 0 472 89 25 0 chr5 30084988 30085067 -169545083 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 328 299 106 15 chr5 30085696 30085871 -169544279 - L1ME LINE L1 -571 5591 5401 378 311 69 72 chr5 30085909 30086285 -169543865 - L1ME LINE L1 -2192 3954 3580 31 0 0 0 chr5 30086468 30086499 -169543651 + AT_rich Low_complexity Low_complexity 1 31 0 1337 37 0 0 chr5 30086500 30086663 -169543487 + L1PA5 LINE L1 5988 6150 -4 1387 222 80 5 chr5 30086685 30087037 -169543113 + MLT2D LTR ERVL 1 480 -40 292 134 60 0 chr5 30087048 30087115 -169543035 + (TATG)n Simple_repeat Simple_repeat 2 72 0 234 158 0 70 chr5 30087116 30087173 -169542977 + MLT2B2 LTR ERVL 459 511 -4 207 0 0 0 chr5 30088448 30088471 -169541679 + (TTG)n Simple_repeat Simple_repeat 2 24 0 661 354 86 3 chr5 30088715 30089051 -169541099 - ERVL LTR ERVL -1317 4447 4084 284 397 14 0 chr5 30089398 30089539 -169540611 - ERVL LTR ERVL -2055 3709 3567 453 373 89 19 chr5 30089576 30090126 -169540024 - ERVL LTR ERVL -1902 3094 2864 1828 164 0 0 chr5 30090650 30090925 -169539225 + AluSx SINE Alu 1 275 -37 857 113 0 7 chr5 30090930 30091072 -169539078 + (GAAA)n Simple_repeat Simple_repeat 3 143 0 228 213 37 37 chr5 30091112 30091248 -169538902 + (CGAAA)n Simple_repeat Simple_repeat 4 139 0 201 212 0 61 chr5 30091322 30091421 -169538729 + (AAGTG)n Simple_repeat Simple_repeat 5 97 0 292 320 48 81 chr5 30091568 30091840 -169538310 - ERVL LTR ERVL -3367 2287 2025 455 315 70 73 chr5 30092922 30093363 -169536787 - L1MEd LINE L1 -5111 1008 569 225 315 75 55 chr5 30093426 30093626 -169536524 - L1MEd LINE L1 -5605 514 311 439 193 237 0 chr5 30195210 30195345 -169434805 + L1MC3 LINE L1 1792 1958 -4468 1504 249 34 36 chr5 30195384 30195946 -169434204 + L1MC3 LINE L1 3098 3658 -2768 1939 252 66 5 chr5 30195946 30196703 -169433447 + L1MC3 LINE L1 4576 5378 -1048 1586 157 102 0 chr5 30196787 30197100 -169433050 - MER46B DNA MER2_type -16 220 1 534 199 6 50 chr5 30197132 30197293 -169432857 + L1MC3 LINE L1 5432 5585 -841 2619 185 17 106 chr5 30197295 30197563 -169432587 - L1 LINE L1 -773 5373 5083 1955 164 92 3 chr5 30197563 30197953 -169432197 - MSTB LTR MaLR -1 425 1 2619 185 17 106 chr5 30197953 30198437 -169431713 - L1 LINE L1 -1063 5083 4688 * 3986 194 19 0 chr5 30198429 30199185 -169430965 + L1PB4 LINE L1 5379 6148 -8 * 8808 195 49 93 chr5 30199181 30201761 -169428389 + L1MC3 LINE L1 5597 8064 -1 379 303 79 31 chr5 30202344 30202700 -169427450 + L1M4 LINE L1 2154 2526 -3620 206 368 73 26 chr5 30203017 30203251 -169426899 - L2 LINE L2 -1483 1831 1587 459 174 41 33 chr5 30204422 30204543 -169425607 + Tigger6a DNA MER2_type 366 487 -596 833 210 5 16 chr5 30204548 30204734 -169425416 + Tigger6a DNA MER2_type 899 1082 -1 272 235 15 29 chr5 30205055 30205123 -169425027 + MER94 DNA DNA 1 67 -67 23 97 0 0 chr5 30205174 30205246 -169424904 + AT_rich Low_complexity Low_complexity 1 72 0 22 56 0 0 chr5 30205416 30205452 -169424698 + AT_rich Low_complexity Low_complexity 1 36 0 555 256 118 7 chr5 30205487 30205776 -169424374 + MER114 LTR ERV 7 327 -321 462 227 8 30 chr5 30205782 30205914 -169424236 + AluJb SINE Alu 3 131 -181 269 246 170 29 chr5 30207759 30208036 -169422114 + L1ME4a LINE L1 5750 6065 -56 815 277 137 25 chr5 30208177 30208650 -169421500 + MLT1H LTR MaLR 1 526 -23 1860 145 102 3 chr5 30209160 30209492 -169420658 - MER47A DNA MER2_type -1 365 1 22 0 0 0 chr5 30209831 30209853 -169420297 + AT_rich Low_complexity Low_complexity 1 22 0 1085 303 72 35 chr5 30210376 30210803 -169419347 + MLT1H LTR MaLR 3 454 -95 1992 192 6 6 chr5 30210803 30211168 -169418982 - MLT1A1 LTR MaLR 0 365 1 1085 303 72 35 chr5 30211168 30211252 -169418898 + MLT1H LTR MaLR 454 533 -16 449 244 11 68 chr5 30211774 30211950 -169418200 + MER103 DNA DNA 1 166 0 190 264 102 148 chr5 30212279 30212414 -169417736 - MIR SINE MIR -1 261 138 717 215 0 0 chr5 30212414 30212544 -169417606 + FLAM_A SINE Alu 1 130 -3 190 264 102 148 chr5 30212544 30212624 -169417526 - MIR SINE MIR -124 138 56 464 252 29 14 chr5 30213192 30213331 -169416819 - L1MA10 LINE L1 -3 6331 6191 2131 147 44 49 chr5 30213331 30213759 -169416391 - MSTB LTR MaLR 0 426 1 8379 173 47 31 chr5 30213759 30214092 -169416058 - MSTB-int LTR MaLR 0 1651 1325 10386 40 1 1 chr5 30214092 30216134 -169414016 - L1PA4 LINE L1 0 6155 4112 8379 173 47 31 chr5 30216134 30217421 -169412729 - MSTB-int LTR MaLR -326 1325 5 1917 110 0 0 chr5 30217438 30217693 -169412457 - AluY SINE Alu -3 308 54 2427 176 7 16 chr5 30217694 30218119 -169412031 - MSTB LTR MaLR -5 421 1 745 214 35 12 chr5 30218201 30218234 -169411916 - L1ME1 LINE L1 -239 5927 5895 3634 193 62 7 chr5 30218234 30218391 -169411759 - L1MA3 LINE L1 -406 5899 5752 2018 127 96 8 chr5 30218391 30218777 -169411373 - L1MA3 LINE L1 0 6305 5886 3634 193 62 7 chr5 30218777 30219895 -169410255 - L1MA3 LINE L1 -553 5752 4561 327 126 35 81 chr5 30219895 30219950 -169410200 + THE1C LTR MaLR 1 51 -377 4497 111 27 31 chr5 30219950 30220962 -169409188 + MER11A LTR ERVK 1 1265 -1 1496 163 34 37 chr5 30220963 30221289 -169408861 + THE1C LTR MaLR 51 375 0 4444 188 36 8 chr5 30221289 30222215 -169407935 - L1MA3 LINE L1 -1581 4565 3614 316 212 114 0 chr5 30222303 30222422 -169407728 - L1ME4a LINE L1 -266 5855 5715 3083 42 3 0 chr5 30222570 30222951 -169407199 - L1PA4 LINE L1 0 6155 5774 1826 140 27 71 chr5 30222954 30223319 -169406831 - THE1C LTR MaLR -26 349 1 8871 144 32 41 chr5 30223319 30224913 -169405237 - THE1C-int LTR MaLR 0 1580 1 1998 157 10 63 chr5 30224913 30225309 -169404841 - THE1C LTR MaLR 0 375 1 1432 236 55 18 chr5 30225309 30225424 -169404726 - L1MA3 LINE L1 -2528 3618 3509 2021 158 44 3 chr5 30225424 30225784 -169404366 - THE1C LTR MaLR 0 375 1 9444 132 32 38 chr5 30225784 30227373 -169402777 - THE1C-int LTR MaLR 0 1580 1 2211 150 27 3 chr5 30227373 30227739 -169402411 - THE1C LTR MaLR 0 375 1 1432 236 55 18 chr5 30227739 30228079 -169402071 - L1MA3 LINE L1 -2636 3510 3144 2709 34 0 0 chr5 30228089 30228411 -169401739 - L1PA4 LINE L1 -5 6150 5829 1350 19 0 0 chr5 30228415 30228577 -169401573 + L1P2 LINE L1 5307 5468 -687 967 272 31 4 chr5 30228575 30228836 -169401314 - L1MEc LINE L1 -6089 307 40 * 187 352 131 28 chr5 30228980 30229125 -169401025 - L2 LINE L2 -4 3309 3150 227 274 14 27 chr5 30229185 30229258 -169400892 + L2 LINE L2 3224 3295 -18 595 117 11 0 chr5 30229550 30229644 -169400506 - L1PA7 LINE L1 -3 6151 6057 596 108 0 0 chr5 30229644 30229730 -169400420 + L1PA7 LINE L1 5978 6066 -88 263 28 28 0 chr5 30229843 30229879 -169400271 + (TG)n Simple_repeat Simple_repeat 1 37 0 198 284 64 37 chr5 30229891 30230000 -169400150 - L2 LINE L2 -461 2853 2742 203 211 0 26 chr5 30230468 30230544 -169399606 + (TATATG)n Simple_repeat Simple_repeat 6 79 0 2016 52 36 62 chr5 30230987 30231294 -169398856 - AluY SINE Alu -12 299 1 21 0 0 0 chr5 30232035 30232056 -169398094 + AT_rich Low_complexity Low_complexity 1 21 0 204 118 29 0 chr5 30232318 30232352 -169397798 + (TGG)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr5 30233410 30233433 -169396717 + AT_rich Low_complexity Low_complexity 1 23 0 2132 115 3 7 chr5 30234066 30234370 -169395780 + AluSc SINE Alu 1 303 -6 296 276 97 52 chr5 30235193 30235327 -169394823 - L1P LINE L1 -1921 4225 4086 724 283 45 0 chr5 30236448 30236625 -169393525 - MER5A DNA MER1_type 0 189 5 269 222 16 0 chr5 30236952 30237015 -169393135 + MER96 DNA MER1_type? 3 66 -109 254 339 122 29 chr5 30239298 30239684 -169390466 + L2 LINE L2 1636 2057 -1257 312 389 116 19 chr5 30239802 30240267 -169389883 + L2 LINE L2 2376 2885 -429 5016 177 48 32 chr5 30240335 30241323 -169388827 - L1MA9 LINE L1 -1 6311 5341 180 0 0 0 chr5 30241323 30241343 -169388807 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5016 177 48 32 chr5 30241343 30241482 -169388668 - L1MA9 LINE L1 -971 5341 5206 1931 164 3 0 chr5 30241482 30241792 -169388358 - AluJb SINE Alu -1 311 1 5016 177 48 32 chr5 30241792 30241895 -169388255 - L1MA9 LINE L1 -1106 5206 5052 37 0 0 0 chr5 30242058 30242095 -169388055 + AT_rich Low_complexity Low_complexity 1 37 0 238 333 205 0 chr5 30242128 30242245 -169387905 + L2 LINE L2 3117 3257 -15 21 36 0 0 chr5 30243655 30243683 -169386467 + AT_rich Low_complexity Low_complexity 1 28 0 1167 118 23 27 chr5 30243685 30243905 -169386245 - L1MA8 LINE L1 -20 6271 6053 2179 131 19 25 chr5 30244261 30244627 -169385523 - THE1B LTR MaLR 0 364 1 11525 93 13 9 chr5 30244627 30245422 -169384728 - THE1B-int LTR MaLR 0 1580 773 1965 204 64 21 chr5 30245422 30245906 -169384244 - LTR22 LTR ERVK -4 505 1 11525 93 13 9 chr5 30245906 30246683 -169383467 - THE1B-int LTR MaLR -807 773 1 2230 113 19 38 chr5 30246683 30247054 -169383096 - THE1B LTR MaLR 0 364 1 776 165 110 18 chr5 30247480 30247644 -169382506 + AluJb SINE Alu 130 308 -4 22 0 0 0 chr5 30248284 30248306 -169381844 + AT_rich Low_complexity Low_complexity 1 22 0 212 200 43 43 chr5 30248854 30248924 -169381226 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 27 29 0 0 chr5 30249590 30249624 -169380526 + AT_rich Low_complexity Low_complexity 1 34 0 287 271 200 53 chr5 30249719 30249889 -169380261 - MIR SINE MIR -8 254 60 185 301 0 55 chr5 30250035 30250108 -169380042 - MIR SINE MIR -116 146 78 502 328 107 12 chr5 30250384 30250637 -169379513 + MLT1K LTR MaLR 147 423 -165 343 99 14 42 chr5 30250828 30250899 -169379251 + (TCCC)n Simple_repeat Simple_repeat 2 70 0 1567 187 29 0 chr5 30250907 30251185 -169378965 - AluJo SINE Alu -26 286 1 1533 74 42 0 chr5 30251201 30251416 -169378734 - L1PA6 LINE L1 0 6154 5931 28 0 0 0 chr5 30251591 30251619 -169378531 + AT_rich Low_complexity Low_complexity 1 28 0 30 59 0 0 chr5 30252258 30252309 -169377841 + AT_rich Low_complexity Low_complexity 1 51 0 228 351 82 34 chr5 30253637 30253990 -169376160 + L2 LINE L2 1817 2186 -1128 295 296 113 0 chr5 30254056 30254171 -169375979 - MIR SINE MIR -18 244 117 202 79 79 0 chr5 30254182 30254245 -169375905 + (TA)n Simple_repeat Simple_repeat 1 68 0 47 0 0 0 chr5 30254288 30254335 -169375815 + AT_rich Low_complexity Low_complexity 1 47 0 732 60 28 39 chr5 30254335 30254517 -169375633 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 2017 173 37 44 chr5 30255029 30255590 -169374560 - MLT2A2 LTR ERVL 0 554 1 2441 116 19 16 chr5 30255740 30256112 -169374038 - THE1C LTR MaLR -2 373 1 1284 256 39 22 chr5 30256220 30256583 -169373567 + MLT1A2 LTR MaLR 1 369 -5 264 267 139 0 chr5 30256902 30257003 -169373147 - MIR SINE MIR -11 251 137 466 305 100 36 chr5 30257155 30257927 -169372223 + L1MEd LINE L1 861 1732 -4578 291 363 16 8 chr5 30257964 30258088 -169372062 - MIR SINE MIR -111 151 27 286 346 33 27 chr5 30258199 30258373 -169371777 + MIR SINE MIR 19 193 -63 1865 187 22 6 chr5 30258420 30258779 -169371371 + MLT1A1 LTR MaLR 1 365 0 393 250 4 123 chr5 30259244 30259504 -169370646 - L2 LINE L2 -1 3312 3084 240 137 0 0 chr5 30259956 30260007 -169370143 - LTR66 LTR ERVL -166 444 394 186 133 0 0 chr5 30260013 30260043 -169370107 + (TA)n Simple_repeat Simple_repeat 2 31 0 1166 259 114 34 chr5 30260106 30260546 -169369604 - MLT1D LTR MaLR 0 505 31 24 0 0 0 chr5 30261036 30261060 -169369090 + AT_rich Low_complexity Low_complexity 1 24 0 1348 198 24 11 chr5 30263075 30263402 -169366748 + MER47B DNA MER2_type 1 379 -39 771 142 24 8 chr5 30263390 30263517 -169366633 + Tigger5 DNA MER2_type 2194 2322 -1 * 378 293 73 7 chr5 30263646 30263796 -169366354 + MLT1I LTR MaLR 100 259 -150 238 239 15 15 chr5 30264238 30264305 -169365845 + CT-rich Low_complexity Low_complexity 2 68 0 3188 28 3 5 chr5 30264419 30264808 -169365342 - L1PA4 LINE L1 0 6155 5768 2074 141 34 3 chr5 30266014 30266341 -169363809 + MER1B DNA MER1_type 1 337 0 646 301 69 0 chr5 30267471 30267687 -169362463 + MIR SINE MIR 1 231 -31 2460 47 0 28 chr5 30269390 30269710 -169360440 + AluY SINE Alu 1 311 0 198 0 0 0 chr5 30269822 30269844 -169360306 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 28 48 0 0 chr5 30270520 30270562 -169359588 + AT_rich Low_complexity Low_complexity 1 42 0 192 349 0 0 chr5 30271003 30271069 -169359081 - L2 LINE L2 -1066 2248 2183 480 270 80 44 chr5 30271095 30271321 -169358829 - MIR SINE MIR -17 245 12 228 100 0 0 chr5 30272030 30272070 -169358080 + (CA)n Simple_repeat Simple_repeat 2 41 0 314 341 49 0 chr5 30272251 30272374 -169357776 + MIR SINE MIR 32 160 -102 25 0 0 0 chr5 30272875 30272900 -169357250 + AT_rich Low_complexity Low_complexity 1 25 0 29 70 0 0 chr5 30274189 30274246 -169355904 + AT_rich Low_complexity Low_complexity 1 57 0 213 121 0 0 chr5 30274768 30274801 -169355349 + (T)n Simple_repeat Simple_repeat 1 33 0 2594 220 109 18 chr5 30275055 30275815 -169354335 - L1ME1 LINE L1 -7 6159 5331 22 0 0 0 chr5 30275837 30275859 -169354291 + AT_rich Low_complexity Low_complexity 1 22 0 2457 232 106 34 chr5 30276109 30277014 -169353136 - L1ME2 LINE L1 -71 6093 5091 2540 51 0 3 chr5 30277014 30277325 -169352825 + AluY SINE Alu 1 310 -1 2457 232 106 34 chr5 30277325 30277509 -169352641 - L1ME2 LINE L1 -1073 5091 4922 200 288 63 36 chr5 30279482 30279593 -169350557 + MER5A DNA MER1_type 1 114 -75 395 346 118 7 chr5 30281558 30281838 -169348312 - LTR33A LTR ERVL 0 523 213 311 244 13 0 chr5 30282096 30282174 -169347976 + MER116 DNA Mariner 2 80 0 290 346 39 15 chr5 30282313 30282443 -169347707 + L2 LINE L2 3180 3312 -1 25 31 0 0 chr5 30282512 30282544 -169347606 + AT_rich Low_complexity Low_complexity 1 32 0 1797 222 35 78 chr5 30282736 30283313 -169346837 - MLT2B3 LTR ERVL 0 554 3 301 71 71 0 chr5 30284063 30284133 -169346017 + (TA)n Simple_repeat Simple_repeat 2 76 0 2212 165 22 15 chr5 30286227 30286632 -169343518 + MER21-int LTR ERV1 3742 4149 -42 284 256 0 13 chr5 30286711 30286789 -169343361 + (TA)n Simple_repeat Simple_repeat 2 78 0 382 250 40 0 chr5 30286797 30286897 -169343253 + MER21B LTR ERV1 245 348 -515 10870 210 28 39 chr5 30286898 30290864 -169339286 + L1MB1 LINE L1 2246 6167 -1 363 260 86 60 chr5 30290893 30291208 -169338942 + L1ME4a LINE L1 5793 6115 -6 27 81 0 0 chr5 30291664 30291726 -169338424 + AT_rich Low_complexity Low_complexity 1 62 0 217 291 23 23 chr5 30292561 30292647 -169337503 - MIR SINE MIR -120 142 57 32 0 0 0 chr5 30292795 30292827 -169337323 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr5 30293444 30293477 -169336673 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr5 30293764 30293809 -169336341 + AT_rich Low_complexity Low_complexity 1 45 0 288 0 0 0 chr5 30294135 30294167 -169335983 + (TG)n Simple_repeat Simple_repeat 1 32 0 295 323 134 12 chr5 30294965 30295219 -169334931 + MARNA DNA Mariner 84 368 -218 192 250 0 0 chr5 30295231 30295275 -169334875 + L2 LINE L2 3269 3312 -1 38 61 0 30 chr5 30295410 30295509 -169334641 + AT_rich Low_complexity Low_complexity 1 96 0 231 146 0 0 chr5 30295800 30295841 -169334309 + (TG)n Simple_repeat Simple_repeat 2 42 0 183 129 0 0 chr5 30295853 30295884 -169334266 + (CA)n Simple_repeat Simple_repeat 2 32 0 28 0 0 0 chr5 30296394 30296422 -169333728 + AT_rich Low_complexity Low_complexity 1 28 0 543 138 46 0 chr5 30296425 30296512 -169333638 + AluSg/x SINE Alu 180 270 -40 201 39 0 0 chr5 30296513 30296539 -169333611 + (TC)n Simple_repeat Simple_repeat 2 27 0 2873 150 38 2 chr5 30296732 30297212 -169332938 + LOR1a LTR ERV1 1 497 0 263 285 100 0 chr5 30297746 30297876 -169332274 + MER103 DNA DNA 22 164 -2 27 62 0 0 chr5 30298766 30298814 -169331336 + AT_rich Low_complexity Low_complexity 1 48 0 302 262 102 97 chr5 30298853 30299295 -169330855 + HAL1 LINE L1 2062 2505 -2 519 100 0 0 chr5 30299550 30299620 -169330530 + LOR1a LTR ERV1 428 497 0 24 77 0 0 chr5 30299767 30299819 -169330331 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr5 30301455 30301476 -169328674 + AT_rich Low_complexity Low_complexity 1 21 0 6569 64 22 6 chr5 30301646 30302701 -169327449 - L1PA7 LINE L1 0 6154 5076 3959 90 11 4 chr5 30302704 30303261 -169326889 + L1PA7 LINE L1 4530 5090 -1056 1665 280 43 16 chr5 30303461 30304158 -169325992 - L1ME1 LINE L1 -216 5968 5254 245 369 26 55 chr5 30304150 30304532 -169325618 + L1MB2 LINE L1 417 787 -5516 * 2628 238 61 51 chr5 30304617 30305567 -169324583 + L1MB2 LINE L1 779 1636 -4729 1892 142 4 0 chr5 30305567 30305842 -169324308 + AluSx SINE Alu 1 276 -36 2628 238 61 51 chr5 30305842 30306059 -169324091 + L1MB2 LINE L1 1636 1849 -4516 252 167 25 133 chr5 30306084 30306204 -169323946 + L1MB2 LINE L1 2001 2107 -4277 * 5387 219 27 29 chr5 30306196 30307670 -169322480 + L1MB2 LINE L1 4035 5510 -897 4745 63 10 0 chr5 30307670 30308286 -169321864 + L1PA8 LINE L1 5542 6163 -9 5387 219 27 29 chr5 30308286 30308593 -169321557 + L1MB2 LINE L1 5510 5816 -591 2311 120 76 25 chr5 30308593 30309000 -169321150 + MSTA LTR MaLR 1 428 0 5387 219 27 29 chr5 30309000 30309045 -169321105 + L1MB2 LINE L1 5816 5860 -547 1935 170 18 12 chr5 30309045 30309380 -169320770 - MER1B DNA MER1_type 0 337 1 5387 219 27 29 chr5 30309380 30309716 -169320434 + L1MB2 LINE L1 5860 6199 -208 1977 130 7 7 chr5 30309716 30310024 -169320126 + AluSx SINE Alu 5 312 0 5387 219 27 29 chr5 30310024 30310223 -169319927 + L1MB2 LINE L1 6199 6397 -10 1045 255 95 19 chr5 30310233 30310708 -169319442 - L1MEc LINE L1 -1046 5169 4659 290 277 11 0 chr5 30310852 30310946 -169319204 - L1MEc LINE L1 -1783 4432 4338 480 324 36 0 chr5 30311085 30311335 -169318815 - L1MEc LINE L1 -2620 3595 3337 491 233 44 61 chr5 30311366 30311546 -169318604 - AluJo SINE Alu -23 289 113 965 266 97 19 chr5 30311551 30312036 -169318114 - L1MEc LINE L1 -2946 3269 2747 2373 124 3 0 chr5 30312039 30312403 -169317747 + L1P LINE L1 4730 5094 -1052 486 120 0 0 chr5 30312428 30312503 -169317647 + L1PA11 LINE L1 6100 6174 0 982 241 14 9 chr5 30312533 30312753 -169317397 - MLT1C LTR MaLR 0 467 247 628 289 86 84 chr5 30312755 30313264 -169316886 + MER34 LTR ERV1 3 512 -30 437 193 96 72 chr5 30313373 30313539 -169316611 - MLT1C LTR MaLR -292 175 6 2045 285 84 38 chr5 30313545 30314708 -169315442 - L1MEc LINE L1 -3479 2736 1627 5830 43 6 1 chr5 30314708 30315430 -169314720 - L1PA4 LINE L1 -3 6152 5428 2045 285 84 38 chr5 30315430 30315703 -169314447 - L1MEc LINE L1 -4588 1627 1368 1846 116 75 36 chr5 30315703 30316064 -169314086 + THE1C LTR MaLR 1 375 0 2045 285 84 38 chr5 30316064 30316838 -169313312 - L1MEc LINE L1 -4847 1368 468 723 298 49 78 chr5 30317007 30317497 -169312653 + L2 LINE L2 1304 1779 -1535 2154 121 13 52 chr5 30317497 30317885 -169312265 + MER4A LTR ERV1 1 373 -291 498 110 0 0 chr5 30317912 30317985 -169312165 + MER4A LTR ERV1 356 428 -236 1259 168 48 0 chr5 30318114 30318323 -169311827 + MER4A LTR ERV1 411 629 -35 2076 321 92 23 chr5 30318337 30319451 -169310699 + L2 LINE L2 1775 2964 -350 802 166 0 14 chr5 30319756 30319895 -169310255 - FLAM_C SINE Alu -6 137 1 25 51 0 0 chr5 30319899 30319938 -169310212 + AT_rich Low_complexity Low_complexity 1 39 0 311 250 54 71 chr5 30321509 30321621 -169308529 + MER5B DNA MER1_type 69 178 0 1999 129 19 26 chr5 30322155 30322466 -169307684 - AluSx SINE Alu -3 309 1 542 178 15 104 chr5 30325159 30325294 -169304856 + AluSq/x SINE Alu 5 127 -186 7068 53 8 0 chr5 30325302 30326404 -169303746 + L1PA6 LINE L1 5057 6164 0 2255 107 48 22 chr5 30326652 30327007 -169303143 + THE1B LTR MaLR 1 364 0 3803 138 19 7 chr5 30327321 30327938 -169302212 - MER41B LTR ERV1 -8 627 3 21 0 0 0 chr5 30328095 30328116 -169302034 + AT_rich Low_complexity Low_complexity 1 21 0 2651 155 69 42 chr5 30330414 30330993 -169299157 - LTR49 LTR ERV1 0 595 1 2387 136 29 15 chr5 30330993 30331405 -169298745 - LTR49-int LTR ERV1 0 6331 5914 2217 142 145 91 chr5 30331412 30332019 -169298131 + MER4A LTR ERV1 1 640 -24 2177 134 31 0 chr5 30332019 30332369 -169297781 + THE1B LTR MaLR 1 361 -3 1673 176 25 6 chr5 30332372 30332695 -169297455 + THE1B-int LTR MaLR 1 329 -1251 413 18 0 18 chr5 30334219 30334274 -169295876 + (TG)n Simple_repeat Simple_repeat 2 55 0 2252 217 20 40 chr5 30334290 30334843 -169295307 - MLT1E2 LTR MaLR -2 624 83 257 317 73 8 chr5 30334763 30334886 -169295264 - MLT2C1 LTR ERVL -223 174 44 * 425 244 0 12 chr5 30336266 30336348 -169293802 + Tigger3(Golem) DNA MER2_type 2 82 -2947 1737 160 20 3 chr5 30336367 30336667 -169293483 + Tigger3(Golem) DNA MER2_type 2724 3028 -1 31 0 0 0 chr5 30337480 30337511 -169292639 + AT_rich Low_complexity Low_complexity 1 31 0 205 169 15 31 chr5 30337575 30337640 -169292510 + (TAA)n Simple_repeat Simple_repeat 1 64 0 228 67 0 0 chr5 30337933 30337963 -169292187 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 232 204 124 73 chr5 30337977 30338114 -169292036 - L1MC5 LINE L1 -31 7930 7787 201 307 80 0 chr5 30338603 30338678 -169291472 - L2 LINE L2 -1 3271 3191 185 285 95 51 chr5 30340303 30340440 -169289710 + MIR SINE MIR 120 262 0 242 161 0 36 chr5 30341456 30341512 -169288638 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 311 364 48 11 chr5 30341512 30341641 -169288509 + L1MC4 LINE L1 6617 6808 -1234 301 270 60 10 chr5 30341730 30341830 -169288320 + MIR SINE MIR 106 210 -52 334 175 52 41 chr5 30342626 30342723 -169287427 + MER103 DNA DNA 53 150 -16 250 276 16 0 chr5 30343806 30343875 -169286275 - MIR SINE MIR -68 140 70 234 93 0 23 chr5 30344210 30344253 -169285897 - L1ME3 LINE L1 -2 6160 6119 300 280 28 0 chr5 30344304 30344411 -169285739 - L1MC4 LINE L1 -146 7896 7787 850 75 0 0 chr5 30344753 30344859 -169285291 + AluY SINE Alu 1 106 -205 25 31 0 0 chr5 30345249 30345281 -169284869 + AT_rich Low_complexity Low_complexity 1 32 0 4358 180 22 55 chr5 30345281 30345447 -169284703 - L1MB5 LINE L1 -8 6166 5996 1774 187 16 27 chr5 30345447 30345816 -169284334 - MLT1A1 LTR MaLR 0 365 1 4358 180 22 55 chr5 30345816 30346899 -169283251 - L1MB5 LINE L1 -178 5996 4960 2344 62 7 0 chr5 30347425 30347738 -169282412 + AluY SINE Alu 1 311 0 2433 51 0 29 chr5 30347985 30348301 -169281849 + AluY SINE Alu 1 307 -4 1965 127 29 23 chr5 30349580 30349888 -169280262 - AluSq SINE Alu -3 310 1 374 204 11 34 chr5 30349931 30350019 -169280131 + MER81 DNA DNA 29 114 0 724 296 113 44 chr5 30350021 30350474 -169279676 - L1MC4 LINE L1 -259 7783 7300 1568 170 125 9 chr5 30350481 30350816 -169279334 - THE1C LTR MaLR -1 374 1 5100 129 26 22 chr5 30350816 30351630 -169278520 - THE1C-int LTR MaLR 0 1580 764 303 53 0 0 chr5 30351630 30351668 -169278482 - MSTA LTR MaLR -390 38 1 537 310 41 0 chr5 30351668 30351910 -169278240 - L1MC4 LINE L1 -755 7287 7036 1909 145 0 7 chr5 30351927 30352203 -169277947 - AluSx SINE Alu -9 303 30 791 234 9 50 chr5 30352203 30352416 -169277734 + AluJo SINE Alu 96 299 -13 855 218 154 4 chr5 30352420 30352686 -169277464 - L1MC4 LINE L1 -1278 6764 6459 631 282 29 0 chr5 30355554 30355728 -169274422 - MIR SINE MIR -2 260 82 5076 214 49 16 chr5 30355828 30357319 -169272831 + L1PA15-16 LINE L1 2762 4304 -2545 187 277 102 66 chr5 30358069 30358206 -169271944 + L2 LINE L2 3168 3309 -4 401 148 12 25 chr5 30358688 30358769 -169271381 + MER5B DNA MER1_type 99 178 0 245 201 54 0 chr5 30359472 30359554 -169270596 + L1MC4 LINE L1 7419 7494 -314 198 71 0 0 chr5 30359560 30359588 -169270562 + (CA)n Simple_repeat Simple_repeat 1 28 0 360 240 185 24 chr5 30359601 30359911 -169270239 + L1MC5 LINE L1 7654 8001 -41 197 211 70 0 chr5 30361543 30361600 -169268550 + MIR SINE MIR 104 164 -98 185 339 0 15 chr5 30361726 30361791 -169268359 + MIR SINE MIR 159 222 -40 2303 228 10 15 chr5 30361973 30362494 -169267656 + L1ME1 LINE L1 5600 6117 -49 6336 169 28 7 chr5 30362605 30364446 -169265704 - L1PBa LINE L1 -4440 1764 1 311 361 128 26 chr5 30364688 30365079 -169265071 + L2 LINE L2 2310 2740 -574 700 171 28 130 chr5 30365125 30365170 -169264980 + MLT1A1 LTR MaLR 1 49 -316 2148 131 0 0 chr5 30365170 30365467 -169264683 - AluSx SINE Alu -15 297 1 700 171 28 130 chr5 30365467 30365637 -169264513 + MLT1A1 LTR MaLR 49 194 -171 399 337 67 13 chr5 30366022 30366222 -169263928 - MIR SINE MIR -10 252 40 500 264 0 8 chr5 30366592 30366717 -169263433 - MIR SINE MIR 0 262 139 221 81 0 27 chr5 30366820 30366857 -169263293 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 499 263 20 40 chr5 30367156 30367308 -169262842 + MLT1J LTR MaLR 1 149 -362 347 206 0 0 chr5 30367449 30367522 -169262628 + MLT1J LTR MaLR 416 488 -23 414 385 42 26 chr5 30367532 30367837 -169262313 - L2 LINE L2 -224 3089 2782 32 75 0 0 chr5 30368397 30368464 -169261686 + AT_rich Low_complexity Low_complexity 1 67 0 29 28 0 0 chr5 30368633 30368669 -169261481 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr5 30368686 30368719 -169261431 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 30368905 30368926 -169261224 + AT_rich Low_complexity Low_complexity 1 21 0 290 305 23 8 chr5 30369042 30369173 -169260977 - HAL1 LINE L1 -121 2386 2254 22 35 0 0 chr5 30369512 30369541 -169260609 + AT_rich Low_complexity Low_complexity 1 29 0 559 244 126 51 chr5 30369833 30370087 -169260063 - HAL1 LINE L1 -651 1856 1584 23 33 0 0 chr5 30370488 30370518 -169259632 + AT_rich Low_complexity Low_complexity 1 30 0 2379 71 6 10 chr5 30370577 30370888 -169259262 + AluY SINE Alu 1 310 -1 883 115 8 0 chr5 30371117 30371247 -169258903 - L1MA2 LINE L1 0 6304 6174 329 318 86 13 chr5 30371424 30371575 -169258575 - L1ME3 LINE L1 -216 5946 5785 434 267 44 11 chr5 30422498 30422678 -169207472 - L1ME4a LINE L1 0 6121 5936 681 256 40 20 chr5 30423904 30424103 -169206047 + L2 LINE L2 3111 3313 0 247 325 0 51 chr5 30424194 30424311 -169205839 - MIR SINE MIR -62 200 90 331 386 90 5 chr5 30426039 30426228 -169203922 + MIR SINE MIR 14 218 -44 2069 125 0 3 chr5 30426410 30426698 -169203452 - AluSx SINE Alu -9 303 17 25 51 0 0 chr5 30426789 30426828 -169203322 + AT_rich Low_complexity Low_complexity 1 39 0 311 361 71 23 chr5 30426963 30427229 -169202921 - L1ME4a LINE L1 -267 5903 5625 196 345 239 7 chr5 30427235 30427377 -169202773 - MIR3 SINE MIR -8 200 26 217 303 0 30 chr5 30427522 30427588 -169202562 + MIR SINE MIR 23 86 -122 464 349 129 73 chr5 30427610 30428448 -169201702 + L2 LINE L2 2239 3144 -169 2733 182 2 0 chr5 30428448 30428914 -169201236 - MLT1C LTR MaLR 0 467 1 464 349 129 73 chr5 30428914 30429082 -169201068 + L2 LINE L2 3144 3301 -12 1851 168 26 3 chr5 30430904 30431244 -169198906 - MER7A DNA MER2_type 0 346 1 762 231 94 14 chr5 30431388 30431674 -169198476 + MER33 DNA MER1_type 16 324 0 2040 142 7 0 chr5 30431742 30432038 -169198112 + AluSx SINE Alu 1 298 -14 292 286 0 24 chr5 30432897 30432981 -169197169 - MIR3 SINE MIR -48 160 79 1128 263 62 27 chr5 30435781 30436229 -169193921 - LTR16B LTR ERVL 0 464 1 1959 334 68 56 chr5 30436338 30438727 -169191423 - HERVL LTR ERVL -328 5326 2601 3857 171 78 51 chr5 30439019 30439856 -169190294 - MER21A LTR ERV1 -72 859 1 1304 322 72 20 chr5 30439967 30440712 -169189438 - HERV16 LTR ERVL -3634 1362 579 1370 102 0 0 chr5 30440712 30440889 -169189261 + THE1B LTR MaLR 1 177 -187 3279 126 14 8 chr5 30440889 30441391 -169188759 + THE1B-int LTR MaLR 1076 1580 0 2587 98 3 8 chr5 30441391 30441757 -169188393 + THE1B LTR MaLR 1 364 0 318 354 49 25 chr5 30441963 30442248 -169187902 - HERV16 LTR ERVL -4656 340 49 644 330 29 13 chr5 30442294 30442600 -169187550 - LTR16B LTR ERVL 0 464 154 2021 145 0 3 chr5 30443117 30443421 -169186729 - AluSx SINE Alu -9 303 1 228 195 0 0 chr5 30444517 30444558 -169185592 - MLT2B1 LTR ERVL -8 512 472 15291 148 35 21 chr5 30444561 30447226 -169182924 + Tigger2 DNA MER2_type 11 2712 -6 1408 198 173 32 chr5 30447255 30447655 -169182495 - MLT2B1 LTR ERVL -63 457 2 815 231 0 0 chr5 30448681 30448854 -169181296 + FRAM SINE Alu 1 166 -10 2050 142 0 3 chr5 30448895 30449205 -169180945 + AluSp SINE Alu 1 309 -4 301 317 68 12 chr5 30449380 30449526 -169180624 - L2 LINE L2 0 3313 3156 198 0 0 0 chr5 30449526 30449548 -169180602 + (TG)n Simple_repeat Simple_repeat 1 22 0 301 317 68 12 chr5 30449548 30449562 -169180588 - L2 LINE L2 -157 3156 3144 1688 154 40 0 chr5 30449692 30449964 -169180186 + AluJb SINE Alu 1 283 -29 245 98 24 0 chr5 30449967 30450008 -169180142 + (TA)n Simple_repeat Simple_repeat 2 43 0 313 319 28 16 chr5 30450046 30450228 -169179922 + L1ME LINE L1 5476 5659 -462 258 236 28 14 chr5 30450262 30450334 -169179816 - Tigger5 DNA MER2_type 0 2323 2251 * 273 180 0 20 chr5 30450307 30450357 -169179793 - Tigger5 DNA MER2_type -2273 50 2 237 222 52 78 chr5 30450596 30450749 -169179401 + L1ME4a LINE L1 5970 6118 -3 24 32 0 0 chr5 30451363 30451394 -169178756 + AT_rich Low_complexity Low_complexity 1 31 0 278 265 0 51 chr5 30451464 30451562 -169178588 + L1MC4 LINE L1 6616 6708 -1334 637 333 56 5 chr5 30452702 30452918 -169177232 - MIR SINE MIR 0 262 36 646 326 60 5 chr5 30453426 30453641 -169176509 - MIR SINE MIR 0 262 36 437 312 110 21 chr5 30453869 30454106 -169176044 + MIR SINE MIR 5 262 0 30 45 0 0 chr5 30457264 30457308 -169172842 + AT_rich Low_complexity Low_complexity 1 44 0 288 0 0 0 chr5 30457976 30458008 -169172142 + (CA)n Simple_repeat Simple_repeat 2 33 0 31 0 0 0 chr5 30458189 30458220 -169171930 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 30458574 30458598 -169171552 + AT_rich Low_complexity Low_complexity 1 24 0 1666 269 86 50 chr5 30459340 30461191 -169168959 - L1ME3A LINE L1 -5 6165 4259 795 288 65 8 chr5 30461217 30461585 -169168565 - L1ME3A LINE L1 -1952 4194 3806 29737 119 19 57 chr5 30462267 30468668 -169161482 + L1PA7 LINE L1 12 6154 0 33 94 0 0 chr5 30469378 30469474 -169160676 + AT_rich Low_complexity Low_complexity 1 96 0 21 36 0 0 chr5 30469715 30469743 -169160407 + AT_rich Low_complexity Low_complexity 1 28 0 1413 194 7 31 chr5 30469970 30470279 -169159871 + AluJo SINE Alu 1 302 0 1055 157 0 0 chr5 30471134 30471306 -169158844 + FRAM SINE Alu 1 167 -9 1529 162 57 17 chr5 30471396 30471692 -169158458 + Tigger7 DNA MER2_type 196 503 -1984 819 133 6 110 chr5 30471714 30471854 -169158296 + Tigger7 DNA MER2_type 2333 2454 -33 2026 127 3 0 chr5 30471854 30472166 -169157984 + AluSx SINE Alu 1 313 0 819 133 6 110 chr5 30472166 30472197 -169157953 + Tigger7 DNA MER2_type 2454 2487 0 182 167 28 0 chr5 30472816 30472852 -169157298 + L2 LINE L2 3269 3305 -8 194 286 0 18 chr5 30473106 30473162 -169156988 - L2 LINE L2 0 3313 3259 256 282 12 0 chr5 30473945 30474030 -169156120 + (TA)n Simple_repeat Simple_repeat 1 86 0 201 325 16 16 chr5 30474130 30474253 -169155897 + (CATA)n Simple_repeat Simple_repeat 2 124 0 208 254 17 0 chr5 30474561 30474620 -169155530 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 287 287 16 31 chr5 30474679 30474808 -169155342 + (TATG)n Simple_repeat Simple_repeat 2 128 0 1539 176 13 89 chr5 30475852 30476243 -169153907 - MLT1A1 LTR MaLR -4 361 1 790 298 133 17 chr5 30476346 30476766 -169153384 - LTR33A LTR ERVL 0 523 55 24 0 0 0 chr5 30477212 30477236 -169152914 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr5 30478875 30478913 -169151237 + AT_rich Low_complexity Low_complexity 1 38 0 2668 200 12 12 chr5 30480044 30480533 -169149617 - MER70B LTR ERVL 0 578 90 767 206 6 24 chr5 30480529 30480694 -169149456 - MER70A LTR ERVL -310 162 1 * 22 56 0 0 chr5 30481768 30481804 -169148346 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 30481927 30481949 -169148201 + AT_rich Low_complexity Low_complexity 1 22 0 3127 180 36 30 chr5 30482057 30482850 -169147300 - L1M2 LINE L1 -743 5403 4652 4438 156 19 25 chr5 30482850 30483705 -169146445 + L1MA7 LINE L1 5440 6289 -2 3127 180 36 30 chr5 30483705 30483716 -169146434 - L1M2 LINE L1 -1494 4652 4643 380 375 119 19 chr5 30485393 30485705 -169144445 - L2 LINE L2 -1 3271 2929 275 271 65 61 chr5 30486551 30486772 -169143378 - MLT1L LTR MaLR -216 295 83 1214 155 0 10 chr5 30486898 30487105 -169143045 - L1PB4 LINE L1 0 6156 5952 956 269 52 55 chr5 30487806 30488170 -169141980 + MLT1G1 LTR MaLR 1 363 -232 500 253 88 24 chr5 30488403 30488573 -169141577 - MIR SINE MIR -10 252 72 311 301 16 32 chr5 30488840 30488963 -169141187 - L2 LINE L2 -4 3309 3189 214 418 34 20 chr5 30488964 30489110 -169141040 + L3 LINE CR1 1428 1575 -2 1920 140 3 7 chr5 30491472 30491772 -169138378 - AluSx SINE Alu -13 299 1 201 337 102 39 chr5 30492063 30492318 -169137832 - L2 LINE L2 -35 3237 2967 289 201 4 0 chr5 30492908 30492973 -169137177 - AluJ/monomer SINE Alu -2 300 245 284 296 16 56 chr5 30493124 30493249 -169136901 + MIR SINE MIR 21 140 -122 2347 94 0 0 chr5 30493261 30493568 -169136582 + AluY SINE Alu 1 307 -4 21 36 0 0 chr5 30493965 30493993 -169136157 + AT_rich Low_complexity Low_complexity 1 28 0 237 320 89 36 chr5 30494182 30494407 -169135743 + L2 LINE L2 2659 2895 -419 489 282 13 19 chr5 30494594 30494831 -169135319 - MLT1K LTR MaLR -181 407 148 213 139 0 23 chr5 30495080 30495123 -169135027 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 188 260 0 26 chr5 30495413 30495490 -169134660 + A-rich Low_complexity Low_complexity 1 75 0 186 43 0 0 chr5 30498972 30498995 -169131155 + (CA)n Simple_repeat Simple_repeat 2 24 0 967 164 0 0 chr5 30499011 30499157 -169130993 - FRAM SINE Alu -29 147 2 705 134 67 8 chr5 30499199 30499333 -169130817 - FLAM_C SINE Alu -1 142 1 287 333 0 0 chr5 30499505 30499589 -169130561 + L2 LINE L2 3227 3310 -3 1118 305 92 10 chr5 30499612 30500091 -169130059 + LTR33 LTR ERVL 1 518 -3 42 48 0 0 chr5 30500594 30500657 -169129493 + AT_rich Low_complexity Low_complexity 1 63 0 3250 103 0 5 chr5 30502008 30502454 -169127696 - MLT2A1 LTR ERVL 0 444 1 341 363 30 6 chr5 30502462 30502630 -169127520 - L1M4 LINE L1 -3317 2829 2658 288 224 0 0 chr5 30502635 30502702 -169127448 + (CATA)n Simple_repeat Simple_repeat 2 68 0 21 0 0 0 chr5 30502780 30502801 -169127349 + AT_rich Low_complexity Low_complexity 1 21 0 5397 195 27 9 chr5 30503159 30505163 -169124987 - L1PA16 LINE L1 0 6869 4778 7503 32 5 2 chr5 30505168 30506346 -169123804 - L1PA2 LINE L1 -1 6154 4976 3553 208 55 10 chr5 30506450 30507418 -169122732 - L1 LINE L1 -1061 5085 4075 31610 30 4 2 chr5 30507423 30512093 -169118057 - L1PA2 LINE L1 -2 6153 1473 31407 39 36 2 chr5 30512193 30516153 -169113997 - L1P LINE L1 -2047 4099 5 12107 190 16 42 chr5 30516150 30520018 -169110132 - L1PA16 LINE L1 -2064 4785 961 * 216 0 0 0 chr5 30520024 30520048 -169110102 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 880 269 93 48 chr5 30520525 30520922 -169109228 - MER90 LTR ERV1 -160 415 1 237 289 125 66 chr5 30521710 30521862 -169108288 + MIR SINE MIR 54 214 -48 229 276 17 0 chr5 30523556 30523614 -169106536 - L2 LINE L2 0 3272 3214 30 45 0 0 chr5 30524573 30524617 -169105533 + AT_rich Low_complexity Low_complexity 1 44 0 217 327 0 40 chr5 30524842 30524943 -169105207 - L2 LINE L2 -333 2939 2843 9217 113 5 9 chr5 30524981 30527051 -169103099 + L1PA10 LINE L1 3900 5961 -207 351 350 101 13 chr5 30527179 30527567 -169102583 + L2 LINE L2 1612 2033 -1281 266 348 119 37 chr5 30527625 30528004 -169102146 + L2 LINE L2 2225 2634 -680 1470 204 3 40 chr5 30528534 30528857 -169101293 - AluJo SINE Alu -1 311 1 310 331 31 19 chr5 30529193 30529353 -169100797 + L2 LINE L2 2239 2400 -914 1663 158 135 14 chr5 30529519 30529867 -169100283 - MLT1B LTR MaLR 0 390 1 475 303 56 17 chr5 30529970 30530286 -169099864 + LTR67 LTR ERVL 199 556 -1 368 305 54 0 chr5 30530815 30530950 -169099200 - MIR SINE MIR -67 141 18 218 355 98 33 chr5 30530955 30531138 -169099012 + L2 LINE L2 2887 3081 -191 23 0 0 0 chr5 30532174 30532197 -169097953 + AT_rich Low_complexity Low_complexity 1 23 0 338 267 164 50 chr5 30532995 30533257 -169096893 - L2 LINE L2 -14 3299 3008 2368 100 0 0 chr5 30533583 30533893 -169096257 - AluSx SINE Alu -2 310 1 2110 116 0 29 chr5 30534473 30534784 -169095366 + AluSx SINE Alu 1 302 -10 1903 130 13 10 chr5 30535716 30536017 -169094133 - AluSx SINE Alu -10 302 1 1349 329 109 46 chr5 30536286 30536541 -169093609 - L2 LINE L2 -687 2627 2390 1456 177 93 35 chr5 30536541 30536886 -169093264 + MLT1A1 LTR MaLR 1 365 0 1349 329 109 46 chr5 30536886 30537855 -169092295 - L2 LINE L2 -924 2390 1325 295 286 184 51 chr5 30537921 30538176 -169091974 - MLT1J LTR MaLR -212 299 11 185 91 0 30 chr5 30538204 30538237 -169091913 + (GA)n Simple_repeat Simple_repeat 1 32 0 1394 253 107 38 chr5 30538332 30538363 -169091787 - L2 LINE L2 -275 3038 3011 1869 173 0 3 chr5 30538363 30538658 -169091492 + AluJb SINE Alu 1 294 -18 1394 253 107 38 chr5 30538658 30539262 -169090888 - L2 LINE L2 -302 3011 2304 663 300 67 0 chr5 30539363 30539573 -169090577 - MER58A DNA MER1_type 0 224 1 475 295 15 50 chr5 30539660 30539921 -169090229 - MER113 DNA MER1_type? -42 479 228 21 0 0 0 chr5 30540094 30540115 -169090035 + AT_rich Low_complexity Low_complexity 1 21 0 394 257 140 42 chr5 30540453 30540643 -169089507 + MER69 DNA AcHobo 2 2524 -2 572 283 52 82 chr5 30540843 30541172 -169088978 + L2 LINE L2 2957 3275 -38 349 203 16 0 chr5 30541204 30541268 -169088882 - L2 LINE L2 -13 3300 3236 304 302 120 106 chr5 30541411 30541686 -169088464 + L3 LINE CR1 1294 1572 -5 246 231 0 0 chr5 30541695 30541747 -169088403 - L2 LINE L2 0 3313 3262 1034 240 39 4 chr5 30543287 30543516 -169086634 - MIR SINE MIR -12 250 14 247 269 31 13 chr5 30544652 30544744 -169085406 + MIR SINE MIR 54 149 -59 196 276 40 40 chr5 30544813 30544889 -169085261 - MIR SINE MIR -108 154 79 368 294 25 0 chr5 30545438 30545557 -169084593 - MIR3 SINE MIR -2 206 85 2665 107 0 0 chr5 30545731 30546095 -169084055 - THE1B LTR MaLR 0 364 1 297 189 32 0 chr5 30546952 30547047 -169083103 + (TA)n Simple_repeat Simple_repeat 2 99 0 276 91 0 0 chr5 30547504 30547548 -169082602 + (CACAA)n Simple_repeat Simple_repeat 4 47 0 2234 212 75 0 chr5 30548969 30549446 -169080704 + MLT2B2 LTR ERVL 1 513 -2 395 202 150 58 chr5 30550464 30550637 -169079513 - L2 LINE L2 -1 3312 3124 290 258 54 60 chr5 30550879 30551046 -169079104 - MER103 DNA DNA 0 166 1 247 345 62 0 chr5 30551781 30551894 -169078256 - LTR33A LTR ERVL -333 190 71 2241 119 3 0 chr5 30552185 30552497 -169077653 + AluSq SINE Alu 1 313 0 1012 194 57 134 chr5 30552885 30553303 -169076847 - MLT1B LTR MaLR -4 386 1 847 236 139 78 chr5 30553769 30553833 -169076317 + MLT1A1 LTR MaLR 1 60 -305 1447 170 38 60 chr5 30553833 30554180 -169075970 - MER44D DNA MER2_type 0 609 1 847 236 139 78 chr5 30554180 30554459 -169075691 + MLT1A1 LTR MaLR 60 365 0 467 91 26 0 chr5 30554696 30554773 -169075377 - L1PA7 LINE L1 0 6154 6076 1986 124 25 0 chr5 30554805 30555103 -169075047 + AluSx SINE Alu 1 305 0 284 303 45 0 chr5 30555214 30555303 -169074847 + L2 LINE L2 3177 3269 -3 1886 217 73 26 chr5 30556301 30556795 -169073355 - LTR40a LTR ERVL 0 519 3 474 118 0 0 chr5 30556915 30557008 -169073142 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 237 175 18 0 chr5 30557063 30557120 -169073030 + (TA)n Simple_repeat Simple_repeat 2 59 0 200 301 48 78 chr5 30557455 30557558 -169072592 - MER5A DNA MER1_type -3 186 87 279 189 27 40 chr5 30557861 30557935 -169072215 + MLT1E LTR MaLR 442 514 -79 225 238 0 0 chr5 30558121 30558201 -169071949 + GA-rich Low_complexity Low_complexity 2 81 0 604 364 73 36 chr5 30560041 30560714 -169069436 + L2 LINE L2 2042 2739 -575 239 305 114 70 chr5 30560818 30561090 -169069060 + L2 LINE L2 2973 3256 -16 191 296 62 62 chr5 30561129 30561210 -169068940 + L2 LINE L2 2610 2690 -624 386 219 10 0 chr5 30564419 30564515 -169065635 - L1ME LINE L1 -347 5817 5721 261 264 101 54 chr5 30565288 30565417 -169064733 + L2 LINE L2 3173 3307 -6 183 42 0 0 chr5 30565648 30565672 -169064478 + (T)n Simple_repeat Simple_repeat 1 24 0 1674 302 101 30 chr5 30565750 30566380 -169063770 + L2 LINE L2 1784 2511 -803 2439 37 40 0 chr5 30566380 30566679 -169063471 - AluY SINE Alu 0 311 1 1674 302 101 30 chr5 30566679 30567034 -169063116 + L2 LINE L2 2511 2839 -475 410 312 115 17 chr5 30567128 30567362 -169062788 + MIR SINE MIR 3 259 -3 346 281 168 58 chr5 30567427 30567701 -169062449 + L2 LINE L2 2995 3298 -15 22 0 0 0 chr5 30568442 30568464 -169061686 + AT_rich Low_complexity Low_complexity 1 22 0 1594 284 67 58 chr5 30568469 30569589 -169060561 - L1ME3A LINE L1 -17 6153 5015 2003 119 14 14 chr5 30569589 30569884 -169060266 - AluSx SINE Alu -17 295 1 1594 284 67 58 chr5 30569884 30569937 -169060213 - L1ME3A LINE L1 -1155 5015 4964 7750 21 6 0 chr5 30570039 30571130 -169059020 - L1PA2 LINE L1 0 6155 5063 360 409 18 0 chr5 30571872 30572097 -169058053 - L2 LINE L2 -217 3055 2827 381 305 61 115 chr5 30572126 30572621 -169057529 - L2 LINE L2 -673 2641 2174 427 189 142 14 chr5 30573355 30573503 -169056647 - MER20 DNA MER1_type -4 215 49 1861 168 8 55 chr5 30575084 30575466 -169054684 - THE1B LTR MaLR 0 364 1 262 190 121 0 chr5 30576306 30576364 -169053786 + MIR SINE MIR 11 75 -187 490 285 23 0 chr5 30576415 30576545 -169053605 + MER117 DNA MER1_type 65 197 0 225 0 0 0 chr5 30578476 30578501 -169051649 + (CAA)n Simple_repeat Simple_repeat 2 26 0 194 0 39 0 chr5 30578501 30578527 -169051623 + (CA)n Simple_repeat Simple_repeat 1 27 0 226 254 63 0 chr5 30578539 30578602 -169051548 - HsTC2 DNA Tc2 -1808 90 24 474 276 133 41 chr5 30578835 30579204 -169050946 - MLT1J1 LTR MaLR -43 403 1 600 234 0 8 chr5 30581055 30581179 -169048971 - MER94 DNA DNA 0 134 12 2238 107 0 0 chr5 30581264 30581573 -169048577 - AluSq SINE Alu -1 312 4 23 33 0 0 chr5 30581773 30581803 -169048347 + AT_rich Low_complexity Low_complexity 1 30 0 296 197 118 0 chr5 30581865 30581941 -169048209 - MER96 DNA MER1_type? -12 163 79 236 337 84 0 chr5 30582156 30582251 -169047899 + L2 LINE L2 3202 3304 -9 203 257 14 40 chr5 30584175 30584249 -169045901 + MIR SINE MIR 136 207 -55 23 0 0 0 chr5 30586897 30586920 -169043230 + AT_rich Low_complexity Low_complexity 1 23 0 2243 81 0 3 chr5 30588537 30588820 -169041330 - AluSc SINE Alu -27 282 1 411 56 0 0 chr5 30590141 30590195 -169039955 + (ATG)n Simple_repeat Simple_repeat 3 56 0 243 345 79 92 chr5 30592231 30592559 -169037591 - L2 LINE L2 -17 3255 2932 313 371 123 40 chr5 30593017 30593416 -169036734 - L2 LINE L2 0 3272 2841 244 324 105 0 chr5 30593440 30593545 -169036605 - MIR SINE MIR -74 134 19 30 27 0 0 chr5 30594953 30594990 -169035160 + AT_rich Low_complexity Low_complexity 1 37 0 192 231 176 22 chr5 30597888 30597979 -169032171 + MIR SINE MIR 82 186 -76 675 101 10 0 chr5 30598502 30598601 -169031549 - L1PB3 LINE L1 -3 6151 6052 708 137 57 0 chr5 30598603 30598727 -169031423 + L1P LINE L1 5227 5357 -789 637 294 101 22 chr5 30599389 30599617 -169030533 - MIR SINE MIR -2 260 15 1032 188 65 150 chr5 30600277 30600676 -169029474 - MLT1A1 LTR MaLR 0 365 1 352 333 0 0 chr5 30600863 30600959 -169029191 - L2 LINE L2 -9 3263 3168 869 297 133 29 chr5 30601572 30601956 -169028194 - LTR16B LTR ERVL -6 458 35 472 208 28 9 chr5 30602354 30602460 -169027690 + L1 LINE L1 143 250 -5891 * 2056 163 45 17 chr5 30602446 30602886 -169027264 + L1 LINE L1 4148 4603 -1607 4662 76 14 3 chr5 30602886 30603508 -169026642 + L1PA7 LINE L1 5508 6148 -6 2056 163 45 17 chr5 30603508 30603539 -169026611 + L1 LINE L1 4603 4632 -1578 25 75 0 0 chr5 30603720 30603773 -169026377 + AT_rich Low_complexity Low_complexity 1 53 0 1280 234 120 58 chr5 30604303 30604837 -169025313 + MLT1F1 LTR MaLR 1 567 0 2062 125 0 0 chr5 30605204 30605484 -169024666 - AluSg SINE Alu -30 280 1 341 292 98 119 chr5 30605574 30606181 -169023969 - L2 LINE L2 -32 3281 2702 420 146 37 0 chr5 30606181 30606263 -169023887 + L1MB4 LINE L1 6095 6179 -1 341 292 98 119 chr5 30606263 30606535 -169023615 - L2 LINE L2 -611 2702 2426 180 111 0 0 chr5 30606597 30606624 -169023526 + (GAA)n Simple_repeat Simple_repeat 2 28 0 359 278 124 83 chr5 30607576 30607747 -169022403 - MER5A DNA MER1_type 0 189 3 181 359 72 108 chr5 30607875 30608126 -169022024 + L2 LINE L2 3024 3265 -7 2284 146 35 51 chr5 30608199 30608650 -169021500 - Tigger2 DNA MER2_type -2 2716 2273 254 179 0 0 chr5 30608640 30608679 -169021471 - Tigger2 DNA MER2_type -2649 69 31 * 441 114 0 14 chr5 30608679 30608749 -169021401 - AluS SINE Alu -244 69 1 847 147 51 6 chr5 30608753 30608909 -169021241 - MLT1A2 LTR MaLR -211 163 1 22 35 0 0 chr5 30609244 30609273 -169020877 + AT_rich Low_complexity Low_complexity 1 29 0 261 159 0 63 chr5 30609381 30609444 -169020706 - L3 LINE CR1 -606 971 913 2091 163 29 32 chr5 30611123 30611681 -169018469 - MLT2A1 LTR ERVL 0 554 1 25 31 0 0 chr5 30612228 30612260 -169017890 + AT_rich Low_complexity Low_complexity 1 32 0 185 357 0 36 chr5 30612373 30612457 -169017693 - L2 LINE L2 -4 3268 3188 636 245 104 60 chr5 30613397 30613646 -169016504 + MIR SINE MIR 3 262 0 22 0 0 0 chr5 30613785 30613807 -169016343 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr5 30615455 30615504 -169014646 + AT_rich Low_complexity Low_complexity 1 49 0 1675 199 58 62 chr5 30616094 30616561 -169013589 + MLT1C LTR MaLR 1 465 -2 2807 141 4 47 chr5 30616585 30617025 -169013125 + L1MA8 LINE L1 4817 5230 -916 1347 207 117 38 chr5 30617025 30617392 -169012758 - MSTD LTR MaLR 0 396 1 2807 141 4 47 chr5 30617392 30617505 -169012645 + L1MA8 LINE L1 5230 5346 -800 3244 159 32 21 chr5 30617509 30617866 -169012284 + L1MA8 LINE L1 5441 5809 -482 189 0 0 0 chr5 30617866 30617887 -169012263 + (TA)n Simple_repeat Simple_repeat 1 21 0 3244 159 32 21 chr5 30617887 30618147 -169012003 + L1MA8 LINE L1 5809 6065 -226 1190 79 6 6 chr5 30618548 30618713 -169011437 + L1PA13 LINE L1 5988 6152 -11 1979 152 30 41 chr5 30620738 30620925 -169009225 - MLT1B LTR MaLR 0 390 203 1268 246 21 34 chr5 30620925 30621303 -169008847 - MLT1A2 LTR MaLR -1 373 1 1979 152 30 41 chr5 30621303 30621509 -169008641 - MLT1B LTR MaLR -187 203 1 322 371 11 17 chr5 30621770 30621945 -169008205 + L1MEd LINE L1 967 1140 -4979 * 540 289 51 67 chr5 30621940 30622296 -169007854 + HAL1 LINE L1 1104 1453 -1054 701 167 10 66 chr5 30622358 30622556 -169007594 - MER53 DNA DNA -1 188 2 318 318 86 15 chr5 30622698 30622896 -169007254 + L2 LINE L2 2939 3150 -163 224 174 0 22 chr5 30622929 30622975 -169007175 + L2 LINE L2 3269 3313 0 202 309 238 18 chr5 30623048 30623443 -169006707 - L2 LINE L2 -818 2496 2015 265 161 145 0 chr5 30623586 30623648 -169006502 + MLT1H LTR MaLR 479 549 0 966 172 6 6 chr5 30623749 30623912 -169006238 + FRAM SINE Alu 1 163 -13 229 342 27 76 chr5 30624019 30624349 -169005801 - L2 LINE L2 -1639 1675 1362 952 148 51 60 chr5 30624376 30624592 -169005558 - MER20 DNA MER1_type -5 214 1 235 236 0 18 chr5 30625911 30625966 -169004184 + GA-rich Low_complexity Low_complexity 1 54 0 446 305 2 0 chr5 30626607 30626733 -169003417 + MIR SINE MIR 16 143 -65 754 274 23 50 chr5 30626975 30627141 -169003009 - MIR SINE MIR 0 262 104 1876 169 0 7 chr5 30627141 30627449 -169002701 + AluJo SINE Alu 5 310 -2 754 274 23 50 chr5 30627449 30627541 -169002609 - MIR SINE MIR -158 104 11 27 0 0 0 chr5 30630394 30630421 -168999729 + AT_rich Low_complexity Low_complexity 1 27 0 1660 169 7 21 chr5 30630931 30631221 -168998929 + AluJb SINE Alu 3 288 -24 902 133 19 6 chr5 30631868 30632026 -168998124 + L1MA2 LINE L1 6144 6303 -1 198 0 0 0 chr5 30633971 30633993 -168996157 + (A)n Simple_repeat Simple_repeat 1 22 0 2089 109 13 13 chr5 30635688 30635992 -168994158 + AluSq SINE Alu 1 304 -9 1601 155 11 0 chr5 30636619 30636883 -168993267 - AluJb SINE Alu -12 300 34 30 0 0 0 chr5 30637298 30637328 -168992822 + AT_rich Low_complexity Low_complexity 1 30 0 292 220 0 0 chr5 30637909 30637959 -168992191 + L2 LINE L2 2996 3045 -227 776 226 0 0 chr5 30638365 30638511 -168991639 - AluJb SINE Alu -19 293 148 437 333 65 65 chr5 30638928 30639727 -168990423 - L2 LINE L2 0 3272 2479 237 242 204 32 chr5 30640137 30640294 -168989856 + MLT1L LTR MaLR 374 557 -58 40416 56 3 37 chr5 30640459 30646830 -168983320 + L1PA5 LINE L1 11 6154 0 2241 59 38 17 chr5 30646872 30647161 -168982989 + AluY SINE Alu 3 297 -14 273 315 26 0 chr5 30647515 30647621 -168982529 + MIR SINE MIR 35 148 -60 2592 100 39 0 chr5 30647623 30647984 -168982166 + THE1C LTR MaLR 1 375 0 1672 194 14 0 chr5 30648056 30648345 -168981805 + AluJb SINE Alu 1 293 -19 242 219 167 10 chr5 30650592 30650688 -168979462 + LTR33A LTR ERVL 396 506 -17 748 304 32 24 chr5 30651584 30651837 -168978313 - MIR SINE MIR 0 262 8 2527 158 24 2 chr5 30651989 30652406 -168977744 + MSTB LTR MaLR 1 426 0 249 57 0 0 chr5 30652681 30652716 -168977434 + (TG)n Simple_repeat Simple_repeat 1 35 0 321 316 84 19 chr5 30654150 30654365 -168975785 + L1ME4a LINE L1 5691 5919 -202 315 246 0 0 chr5 30655427 30655496 -168974654 - MIR SINE MIR -113 149 81 30 27 0 0 chr5 30657270 30657307 -168972843 + AT_rich Low_complexity Low_complexity 1 37 0 945 130 101 18 chr5 30658847 30659016 -168971134 + AluSg/x SINE Alu 128 310 0 2423 161 105 10 chr5 30659133 30659649 -168970501 - LTR49 LTR ERV1 -30 565 1 8222 131 30 11 chr5 30659745 30661133 -168969017 - LTR49-int LTR ERV1 -47 6284 4871 2544 164 45 80 chr5 30661137 30661789 -168968361 - LTR49-int LTR ERV1 -3123 3208 2580 1721 230 58 87 chr5 30661790 30662520 -168967630 - LTR49-int LTR ERV1 -3872 2459 1670 186 43 0 0 chr5 30662535 30662558 -168967592 + (TA)n Simple_repeat Simple_repeat 1 23 0 735 166 156 29 chr5 30662581 30662786 -168967364 - LTR49 LTR ERV1 -331 264 34 1156 161 0 0 chr5 30662786 30662960 -168967190 + AluJb SINE Alu 138 311 -1 282 102 0 20 chr5 30662979 30663028 -168967122 - MER4D LTR ERV1 -572 331 284 823 288 9 0 chr5 30663163 30663389 -168966761 - MIR SINE MIR -29 233 6 2398 92 0 0 chr5 30663991 30664295 -168965855 - AluSg SINE Alu -4 306 3 463 350 17 6 chr5 30664434 30664614 -168965536 + MIR SINE MIR 13 194 -68 23 54 0 0 chr5 30666735 30666772 -168963378 + AT_rich Low_complexity Low_complexity 1 37 0 275 286 71 43 chr5 30667655 30667795 -168962355 + MIR SINE MIR 119 262 0 200 311 26 100 chr5 30667929 30668119 -168962031 - L2 LINE L2 -1 3312 3137 2119 123 0 19 chr5 30668255 30668564 -168961586 - AluSc SINE Alu -6 303 1 194 272 12 49 chr5 30668851 30668932 -168961218 + L2 LINE L2 2900 2977 -336 2317 94 0 31 chr5 30669254 30669572 -168960578 - AluSg1 SINE Alu -1 308 1 484 158 10 10 chr5 30671120 30671221 -168958929 + (TA)n Simple_repeat Simple_repeat 2 102 0 820 204 17 69 chr5 30671683 30671914 -168958236 - MER20 DNA MER1_type 0 219 1 697 261 46 50 chr5 30672342 30672580 -168957570 + MIR SINE MIR 2 238 -24 21 0 0 0 chr5 30672964 30672985 -168957165 + AT_rich Low_complexity Low_complexity 1 21 0 183 411 9 0 chr5 30673606 30673713 -168956437 - MIR SINE MIR -108 154 47 351 130 14 14 chr5 30674633 30674702 -168955448 + MIR SINE MIR 130 198 -64 285 29 0 0 chr5 30674909 30674943 -168955207 + (A)n Simple_repeat Simple_repeat 1 34 0 223 345 131 10 chr5 30675917 30676123 -168954027 + MIR SINE MIR 32 262 0 180 314 100 29 chr5 30677421 30677561 -168952589 + L2 LINE L2 2734 2883 -431 2590 137 24 12 chr5 30677897 30678320 -168951830 - MSTA LTR MaLR 0 428 1 3988 64 28 4 chr5 30679905 30680437 -168949713 - L1PA8 LINE L1 -1 6171 5627 25 0 0 0 chr5 30680925 30680950 -168949200 + AT_rich Low_complexity Low_complexity 1 25 0 538 266 47 12 chr5 30681642 30681811 -168948339 - MER5B DNA MER1_type -3 175 1 1681 139 14 185 chr5 30682014 30682576 -168947574 + MER31B LTR ERV1 1 466 0 865 83 0 45 chr5 30684184 30684317 -168945833 + MLT1B LTR MaLR 1 127 -263 426 69 46 11 chr5 30684321 30684408 -168945742 + (TTATA)n Simple_repeat Simple_repeat 3 92 0 2587 90 0 59 chr5 30684420 30684807 -168945343 + THE1B LTR MaLR 1 364 0 1067 141 120 34 chr5 30684812 30685046 -168945104 + MLT1B LTR MaLR 135 388 -2 25 0 0 0 chr5 30685256 30685281 -168944869 + AT_rich Low_complexity Low_complexity 1 25 0 389 287 67 13 chr5 30686245 30686395 -168943755 + MIR SINE MIR 104 261 -1 339 164 0 0 chr5 30686976 30687031 -168943119 - MLT1A2 LTR MaLR 0 374 320 * 609 232 32 26 chr5 30687026 30687181 -168942969 - MLT1A2 LTR MaLR -218 156 1 368 135 0 0 chr5 30688002 30688054 -168942096 - MER45C DNA AcHobo -2 951 900 346 328 80 0 chr5 30688050 30688175 -168941975 - MER45C DNA AcHobo -320 633 499 * 534 153 15 124 chr5 30688352 30688459 -168941691 - MER45C DNA AcHobo -762 191 101 1772 97 68 84 chr5 30688459 30688770 -168941380 + AluSx SINE Alu 1 306 -6 534 153 15 124 chr5 30688770 30688799 -168941351 - MER45C DNA AcHobo -852 101 70 1205 131 6 0 chr5 30689169 30689345 -168940805 - AluSq SINE Alu -8 305 129 368 342 81 35 chr5 30689534 30689844 -168940306 - HAL1 LINE L1 -917 1590 1267 2573 136 28 16 chr5 30690865 30691292 -168938858 + MSTB1 LTR MaLR 1 432 0 1844 124 25 3 chr5 30692170 30692453 -168937697 + AluSc SINE Alu 12 300 -9 212 314 32 85 chr5 30692797 30692957 -168937193 - MIR3 SINE MIR -54 154 2 2349 38 42 7 chr5 30693508 30693795 -168936355 + AluY SINE Alu 1 297 -14 24 32 0 0 chr5 30694873 30694904 -168935246 + AT_rich Low_complexity Low_complexity 1 31 0 438 291 40 27 chr5 30695497 30695645 -168934505 - MIR SINE MIR 0 262 113 295 317 14 82 chr5 30695865 30696073 -168934077 - L2 LINE L2 -523 2791 2598 703 314 108 26 chr5 30696095 30696293 -168933857 + MLT1G1 LTR MaLR 1 181 -414 1637 157 14 14 chr5 30696293 30696579 -168933571 - AluJb SINE Alu -26 286 1 703 314 108 26 chr5 30696579 30696833 -168933317 + MLT1G1 LTR MaLR 181 490 -105 234 271 0 0 chr5 30696834 30696893 -168933257 + MLT1G1 LTR MaLR 445 503 -2 28 71 0 0 chr5 30697038 30697094 -168933056 + AT_rich Low_complexity Low_complexity 1 56 0 1967 104 0 18 chr5 30697618 30697896 -168932254 + AluSg SINE Alu 27 299 -11 1335 215 47 64 chr5 30698213 30698622 -168931528 - MER39 LTR ERV1 0 707 306 2576 65 0 3 chr5 30699084 30699393 -168930757 - AluY SINE Alu -2 309 2 181 179 18 18 chr5 30699818 30699874 -168930276 + (TA)n Simple_repeat Simple_repeat 1 56 0 1731 179 65 60 chr5 30700588 30700656 -168929494 - MLT1C LTR MaLR 0 467 401 4416 110 14 50 chr5 30700656 30701373 -168928777 + LTR8 LTR ERV1 1 691 0 1731 179 65 60 chr5 30701373 30701767 -168928383 - MLT1C LTR MaLR -66 401 3 1511 227 172 10 chr5 30701779 30702272 -168927878 + L1MC3 LINE L1 7213 7785 0 184 176 137 39 chr5 30703432 30703483 -168926667 + L2 LINE L2 3187 3242 -30 2247 205 70 37 chr5 30706847 30707365 -168922785 + MER34 LTR ERV1 1 535 -7 28 48 0 0 chr5 30707516 30707558 -168922592 + AT_rich Low_complexity Low_complexity 1 42 0 808 229 124 25 chr5 30707620 30707648 -168922502 - MER5C DNA MER1_type 0 324 300 2471 115 22 0 chr5 30707648 30708004 -168922146 + THE1B LTR MaLR 1 364 0 808 229 124 25 chr5 30708004 30708250 -168921900 - MER5C DNA MER1_type -24 300 23 265 222 14 28 chr5 30708484 30708556 -168921594 + MER69 DNA AcHobo 1 71 -1155 360 252 87 0 chr5 30708697 30708824 -168921326 + MER69 DNA AcHobo 2382 2519 -7 1420 148 93 21 chr5 30709024 30709097 -168921053 - MER44D DNA MER2_type -1882 609 543 2391 165 19 14 chr5 30709097 30709527 -168920623 + MSTB1 LTR MaLR 1 432 0 1420 148 93 21 chr5 30709527 30709743 -168920407 - MER44D DNA MER2_type -1948 543 29 391 247 41 34 chr5 30709873 30710019 -168920131 - MER112 DNA MER1_type -78 182 36 4506 192 22 9 chr5 30710637 30713577 -168916573 - L1PB1 LINE L1 -38 6829 3692 10015 122 116 15 chr5 30713678 30715407 -168914743 - L1PB1 LINE L1 -4327 2536 634 1161 148 10 0 chr5 30715407 30715603 -168914547 - L1PB1 LINE L1 -6663 200 3 242 369 43 14 chr5 30715752 30715893 -168914257 + L2 LINE L2 2602 2746 -568 339 357 54 16 chr5 30716399 30716528 -168913622 - L2 LINE L2 0 3272 3139 1058 226 18 0 chr5 30716546 30716767 -168913383 - MIR SINE MIR -4 258 34 566 209 101 0 chr5 30716940 30717049 -168913101 - MIR SINE MIR -44 218 91 2204 105 55 19 chr5 30717049 30717411 -168912739 + THE1C LTR MaLR 1 375 0 566 209 101 0 chr5 30717411 30717440 -168912710 - MIR SINE MIR -171 91 66 181 328 108 20 chr5 30717635 30717830 -168912320 - L2 LINE L2 -481 2833 2622 323 273 142 50 chr5 30718495 30718755 -168911395 - MLT1J LTR MaLR -12 499 216 2569 50 0 0 chr5 30720882 30721184 -168908966 - AluY SINE Alu -9 302 1 194 200 169 62 chr5 30722339 30722404 -168907746 + L2 LINE L2 3207 3278 -35 362 370 59 25 chr5 30722560 30722914 -168907236 - L2 LINE L2 -411 2903 2538 681 346 67 20 chr5 30722969 30723359 -168906791 - L2 LINE L2 -84 3229 2822 815 339 97 42 chr5 30723380 30724099 -168906051 - L2 LINE L2 -926 2388 1630 22 0 0 0 chr5 30724234 30724256 -168905894 + AT_rich Low_complexity Low_complexity 1 22 0 231 114 0 0 chr5 30724321 30724356 -168905794 + (TA)n Simple_repeat Simple_repeat 1 35 0 193 283 57 0 chr5 30724996 30725049 -168905101 - L2 LINE L2 -1 3312 3257 2236 155 101 8 chr5 30725557 30725743 -168904407 + L1P4 LINE L1 5303 5470 -692 2377 55 3 19 chr5 30725743 30726053 -168904097 + AluY SINE Alu 1 305 -6 2236 155 101 8 chr5 30726053 30726211 -168903939 + L1P4 LINE L1 5470 5612 -550 1980 130 0 36 chr5 30726211 30726512 -168903638 - AluSx SINE Alu -22 290 1 2236 155 101 8 chr5 30726512 30726658 -168903492 + L1P4 LINE L1 5612 5838 -324 288 241 23 11 chr5 30726658 30726745 -168903405 + (TA)n Simple_repeat Simple_repeat 2 89 0 239 217 22 44 chr5 30726770 30726950 -168903200 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 * 245 98 24 0 chr5 30726910 30726951 -168903199 + (CA)n Simple_repeat Simple_repeat 2 43 0 478 161 19 37 chr5 30727003 30727164 -168902986 + (CATA)n Simple_repeat Simple_repeat 2 159 0 1984 153 35 11 chr5 30727168 30727534 -168902616 + L1PB4 LINE L1 5782 6156 0 9635 178 7 12 chr5 30728071 30728359 -168901791 + L1PA7 LINE L1 3228 3516 -2635 9244 92 16 0 chr5 30728359 30730422 -168899728 + L1PA7 LINE L1 4077 6154 0 9635 178 7 12 chr5 30730422 30732712 -168897438 + L1PA7 LINE L1 3516 5791 -360 315 268 21 31 chr5 30732755 30732852 -168897298 - L1MC4 LINE L1 -1333 6709 6614 2327 107 3 22 chr5 30732871 30733236 -168896914 + L1PB1 LINE L1 5777 6134 -17 569 137 81 32 chr5 30733462 30733586 -168896564 - MER53 DNA DNA -58 131 2 26 0 0 0 chr5 30734381 30734407 -168895743 + AT_rich Low_complexity Low_complexity 1 26 0 1975 181 62 2 chr5 30735900 30736336 -168893814 - L1PA16 LINE L1 -9 6157 5661 22 0 0 0 chr5 30736760 30736782 -168893368 + AT_rich Low_complexity Low_complexity 1 22 0 452 308 81 13 chr5 30738465 30738699 -168891451 - L3 LINE CR1 -2 1575 1326 230 269 19 0 chr5 30738706 30738758 -168891392 - L3 LINE CR1 -902 675 623 183 359 160 0 chr5 30738937 30739043 -168891107 - L3 LINE CR1 -1217 360 238 220 348 148 17 chr5 30739368 30739658 -168890492 + L2 LINE L2 1990 2317 -997 299 328 40 8 chr5 30739814 30739939 -168890211 + L2 LINE L2 3180 3308 -5 188 182 23 0 chr5 30744815 30744859 -168885291 + (TA)n Simple_repeat Simple_repeat 1 45 0 1677 172 50 0 chr5 30744972 30745251 -168884899 + AluJb SINE Alu 1 293 -19 2462 132 31 24 chr5 30745511 30745936 -168884214 - MSTA LTR MaLR 0 428 1 1778 146 63 33 chr5 30747142 30747506 -168882644 - THE1C LTR MaLR 0 375 1 198 288 30 15 chr5 30747641 30747707 -168882443 - L3 LINE CR1 -322 1255 1189 1683 231 49 22 chr5 30747727 30748177 -168881973 + LTR40b LTR ERVL 1 462 0 2158 163 72 15 chr5 30748514 30748918 -168881232 + MSTA LTR MaLR 2 428 0 207 100 0 0 chr5 30749439 30749469 -168880681 + (T)n Simple_repeat Simple_repeat 1 30 0 186 43 0 0 chr5 30750598 30750621 -168879529 + (TG)n Simple_repeat Simple_repeat 2 24 0 323 310 35 9 chr5 30750933 30751046 -168879104 + L2 LINE L2 3197 3312 -1 268 327 118 7 chr5 30752057 30752210 -168877940 - L3 LINE CR1 -3 1574 1405 202 303 55 46 chr5 30752291 30752400 -168877750 - MIR SINE MIR -52 210 101 1899 209 105 66 chr5 30756140 30756656 -168873494 - MLT1E LTR MaLR 0 593 58 195 238 0 0 chr5 30757870 30757912 -168872238 - L2 LINE L2 -3 3310 3269 214 330 43 43 chr5 30758955 30759049 -168871101 - L2 LINE L2 -1 3271 3178 227 360 67 13 chr5 30759056 30759206 -168870944 + L2 LINE L2 3154 3311 -2 246 271 29 0 chr5 30761542 30761612 -168868538 - MLT1K LTR MaLR -1 587 516 2110 139 0 0 chr5 30761618 30761921 -168868229 + AluSx SINE Alu 1 303 -9 514 184 0 0 chr5 30863258 30863356 -168766794 - Tigger1 DNA MER2_type -755 1663 1566 3914 153 19 88 chr5 30863356 30864733 -168765417 - pTR5 LTR ERV1 0 2606 1524 593 231 8 0 chr5 30864873 30864994 -168765156 - FLAM_A SINE Alu -11 122 1 866 203 68 4 chr5 30865052 30865289 -168764861 - HAL1 LINE L1 -726 1781 1530 1559 168 62 0 chr5 30865292 30865566 -168764584 - AluJb SINE Alu -21 291 1 382 267 144 7 chr5 30865628 30865774 -168764376 + L2 LINE L2 2481 2646 -668 1299 168 5 0 chr5 30865857 30866066 -168764084 + AluSx SINE Alu 2 211 -101 9394 96 12 13 chr5 30866169 30867626 -168762524 - L1P LINE L1 -763 5383 3928 300 250 13 13 chr5 30867851 30867927 -168762223 - MER81 DNA DNA 0 114 39 31 0 0 0 chr5 30869215 30869246 -168760904 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr5 30869552 30869576 -168760574 + AT_rich Low_complexity Low_complexity 1 24 0 307 280 89 36 chr5 30870330 30870498 -168759652 + MARNA DNA Mariner 229 405 -181 22 0 0 0 chr5 30870776 30870798 -168759352 + AT_rich Low_complexity Low_complexity 1 22 0 2379 158 54 2 chr5 30870879 30871284 -168758866 - MSTB LTR MaLR 0 426 1 229 268 127 0 chr5 30871657 30871728 -168758422 + MIR SINE MIR 19 98 -164 858 198 11 50 chr5 30877432 30877614 -168752536 - FAM SINE Alu 0 175 1 231 188 100 12 chr5 30877622 30877702 -168752448 - L1MC5 LINE L1 -34 7927 7841 1434 196 103 41 chr5 30877715 30878041 -168752109 - L1MC5 LINE L1 -310 7651 7276 813 212 88 5 chr5 30878041 30878234 -168751916 - MER3 DNA MER1_type 0 209 1 1434 196 103 41 chr5 30878234 30878448 -168751702 - L1MC5 LINE L1 -685 7276 7077 352 145 0 105 chr5 30878586 30878662 -168751488 - Tigger5 DNA MER2_type 0 2323 2256 243 250 18 0 chr5 30878674 30878730 -168751420 + Tigger5 DNA MER2_type 2264 2320 -3 * 405 215 0 0 chr5 30878730 30878808 -168751342 - Tigger5 DNA MER2_type -2245 78 1 1835 160 0 11 chr5 30878967 30879254 -168750896 - AluJo SINE Alu -28 284 1 2276 88 10 3 chr5 30879444 30879740 -168750410 + AluSx SINE Alu 8 305 -7 234 228 59 30 chr5 30879764 30879865 -168750285 - L1MC5 LINE L1 -1844 5964 5861 320 250 0 0 chr5 30879867 30879931 -168750219 + AluJ/FLAM SINE Alu 1 64 -238 1079 170 0 0 chr5 30879931 30880096 -168750054 + AluJo/FRAM SINE Alu 130 294 -18 390 21 0 0 chr5 30880355 30880402 -168749748 + (TG)n Simple_repeat Simple_repeat 2 48 0 612 299 51 49 chr5 30880695 30880924 -168749226 - HAL1b LINE L1 -706 642 415 2079 139 0 3 chr5 30880924 30881225 -168748925 + AluJb SINE Alu 1 300 -12 612 299 51 49 chr5 30881225 30881543 -168748607 - HAL1b LINE L1 -933 415 94 2463 73 0 0 chr5 30881905 30882206 -168747944 - AluY SINE Alu -10 301 1 21 0 0 0 chr5 30882918 30882939 -168747211 + AT_rich Low_complexity Low_complexity 1 21 0 224 313 197 50 chr5 30883147 30883357 -168746793 + L3 LINE CR1 1120 1388 -189 1849 151 0 27 chr5 30883357 30883656 -168746494 + AluJb SINE Alu 1 291 -21 224 313 197 50 chr5 30883656 30883745 -168746405 + L3 LINE CR1 1388 1463 -114 221 384 30 0 chr5 30884719 30884818 -168745332 - MIR3 SINE MIR -50 158 57 911 226 28 19 chr5 30884840 30885052 -168745098 - MIR SINE MIR -37 225 12 2332 93 0 0 chr5 30885641 30885941 -168744209 - AluSq SINE Alu -13 300 1 5495 105 14 27 chr5 30886032 30887000 -168743150 - L1PB3 LINE L1 -4 6150 5194 1811 140 59 0 chr5 30887111 30887397 -168742753 - AluJo SINE Alu -7 305 3 2117 141 0 7 chr5 30887711 30888010 -168742140 - AluSx SINE Alu -15 297 1 4401 177 25 16 chr5 30888322 30889339 -168740811 - L1MB8 LINE L1 -1 6177 5144 608 219 0 0 chr5 30889337 30889474 -168740676 - L1MB8 LINE L1 -1461 4685 4549 * 2204 89 94 19 chr5 30889495 30889808 -168740342 - L1PA13 LINE L1 -39 6124 5780 2025 140 0 0 chr5 30889808 30890101 -168740049 - AluSx SINE Alu -19 293 1 2204 89 94 19 chr5 30890101 30890160 -168739990 - L1PA13 LINE L1 -383 5780 5727 276 55 0 73 chr5 30890164 30890219 -168739931 - FAM SINE Alu -1 178 128 3028 228 53 12 chr5 30890219 30890393 -168739757 - L1MB8 LINE L1 -1589 4557 4392 2588 61 0 3 chr5 30890393 30890704 -168739446 - AluY SINE Alu -1 310 1 3028 228 53 12 chr5 30890704 30891432 -168738718 - L1MB8 LINE L1 -1754 4392 3618 271 384 56 0 chr5 30892879 30893004 -168737146 + L2 LINE L2 3141 3272 0 1963 102 80 0 chr5 30893546 30893821 -168736329 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr5 30893915 30893936 -168736214 + AT_rich Low_complexity Low_complexity 1 21 0 193 286 114 0 chr5 30894066 30894136 -168736014 + L3 LINE CR1 1496 1573 -4 1636 164 39 4 chr5 30895444 30895725 -168734425 - AluJo SINE Alu -21 291 1 1178 125 91 159 chr5 30895839 30896223 -168733927 - MER46B DNA MER2_type -3 233 1 2171 207 62 20 chr5 30897142 30897305 -168732845 - MER44D DNA MER2_type -1913 574 419 545 118 11 0 chr5 30897305 30897398 -168732752 + L1PA15 LINE L1 6072 6165 0 2171 207 62 20 chr5 30897398 30897732 -168732418 - MER44D DNA MER2_type -2068 419 1 1589 281 82 48 chr5 30897771 30898639 -168731511 + L2 LINE L2 1841 2737 -577 197 284 28 83 chr5 30898860 30898969 -168731181 - L2 LINE L2 -213 3059 2957 468 0 0 0 chr5 30900067 30900119 -168730031 + (TG)n Simple_repeat Simple_repeat 2 53 0 2255 118 0 0 chr5 30900169 30900466 -168729684 + AluSx SINE Alu 2 298 -14 418 270 13 113 chr5 30901720 30901950 -168728200 + MIR SINE MIR 53 259 -3 2225 79 0 30 chr5 30903006 30903311 -168726839 + AluY SINE Alu 3 298 -13 2316 104 0 0 chr5 30904425 30904723 -168725427 + AluSx SINE Alu 1 298 -14 207 0 0 0 chr5 30905468 30905491 -168724659 + (T)n Simple_repeat Simple_repeat 1 23 0 489 298 6 32 chr5 30906217 30906375 -168723775 + MIR SINE MIR 31 184 -78 700 167 25 8 chr5 30906387 30906507 -168723643 + MER90 LTR ERV1 352 473 -102 239 294 44 0 chr5 30908748 30908816 -168721334 + L2 LINE L2 3201 3271 -1 386 127 16 0 chr5 30909079 30909142 -168721008 - LTR65 LTR ERV1 -6 663 600 623 224 8 0 chr5 30909317 30909451 -168720699 - LTR65 LTR ERV1 -534 135 1 181 324 208 43 chr5 30909661 30910103 -168720047 + L2 LINE L2 2243 2757 -557 183 262 33 16 chr5 30910295 30910356 -168719794 + L2 LINE L2 3008 3069 -203 235 309 119 0 chr5 30910514 30910598 -168719552 - MIR SINE MIR -121 141 48 304 299 170 26 chr5 30910898 30911092 -168719058 - MIR SINE MIR -21 241 20 24 0 0 0 chr5 30911501 30911525 -168718625 + AT_rich Low_complexity Low_complexity 1 24 0 220 242 0 16 chr5 30913054 30913116 -168717034 + (TA)n Simple_repeat Simple_repeat 1 61 0 21 0 0 0 chr5 30913187 30913208 -168716942 + AT_rich Low_complexity Low_complexity 1 21 0 636 235 129 18 chr5 30913411 30913581 -168716569 + MER5A DNA MER1_type 1 189 0 917 244 10 0 chr5 30914316 30914509 -168715641 - MER58A DNA MER1_type -11 213 19 1609 118 6 156 chr5 30914738 30915103 -168715047 - AluJb SINE Alu -2 310 1 248 277 31 75 chr5 30915775 30915934 -168714216 - L2 LINE L2 -18 3295 3144 224 299 146 29 chr5 30917286 30917423 -168712727 - MIR3 SINE MIR -55 153 1 885 325 115 21 chr5 30917645 30918255 -168711895 + L2 LINE L2 1955 2621 -693 1550 169 69 4 chr5 30918288 30918548 -168711602 + AluJo SINE Alu 1 277 -35 423 78 0 0 chr5 30918549 30918613 -168711537 + (TC)n Simple_repeat Simple_repeat 2 65 0 248 0 31 0 chr5 30918616 30918648 -168711502 + (CA)n Simple_repeat Simple_repeat 2 34 0 234 356 0 11 chr5 30918941 30919028 -168711122 + L2 LINE L2 2622 2707 -607 632 256 82 0 chr5 30919071 30919266 -168710884 + L2 LINE L2 2057 2267 -1047 258 51 0 0 chr5 30919269 30919308 -168710842 - L1P LINE L1 -854 5300 5262 1081 283 123 11 chr5 30919308 30919985 -168710165 + L2 LINE L2 2559 3311 -2 548 269 146 61 chr5 30920056 30920480 -168709670 + L2 LINE L2 2809 3268 -4 21 0 0 0 chr5 30920603 30920624 -168709526 + AT_rich Low_complexity Low_complexity 1 21 0 290 302 179 40 chr5 30921275 30921527 -168708623 - L3b LINE CR1 -28 1555 1269 816 276 39 4 chr5 30922186 30922418 -168707732 - MIR SINE MIR -3 259 20 269 289 44 22 chr5 30922947 30923037 -168707113 - MER5B DNA MER1_type -72 106 15 183 336 44 58 chr5 30923062 30923288 -168706862 + L2 LINE L2 3019 3241 -31 2077 127 0 7 chr5 30924930 30925222 -168704928 + AluJb SINE Alu 1 290 -22 37 23 0 0 chr5 30925268 30925312 -168704838 + AT_rich Low_complexity Low_complexity 1 44 0 405 234 19 0 chr5 30925483 30925610 -168704540 + L1ME1 LINE L1 6036 6181 -3 1468 178 73 14 chr5 30930347 30930633 -168699517 - AluSx SINE Alu -9 303 1 222 37 0 0 chr5 30931066 30931093 -168699057 + (A)n Simple_repeat Simple_repeat 1 27 0 2248 99 0 25 chr5 30931458 30931772 -168698378 - AluSq SINE Alu -7 306 1 366 299 57 13 chr5 30931885 30932042 -168698108 - L1MC4a LINE L1 -1904 5904 5741 323 178 99 40 chr5 30932627 30932728 -168697422 + L1ME4a LINE L1 5512 5618 -503 967 144 0 0 chr5 30932758 30932897 -168697253 + AluJo SINE Alu 120 258 -54 382 252 94 6 chr5 30932951 30933023 -168697127 + L1ME4a LINE L1 5712 5776 -345 875 232 34 73 chr5 30933023 30933256 -168696894 - MER58A DNA MER1_type 0 224 1 382 252 94 6 chr5 30933256 30933342 -168696808 + L1ME4a LINE L1 5776 5884 -237 231 143 0 0 chr5 30933429 30933471 -168696679 - LTR66 LTR ERVL -172 438 397 1611 106 68 0 chr5 30933785 30934022 -168696128 + AluSg SINE Alu 1 253 -57 239 0 32 0 chr5 30934035 30934066 -168696084 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1259 172 60 84 chr5 30934224 30934556 -168695594 - MER44D DNA MER2_type -6 603 10 38 0 0 0 chr5 30935245 30935283 -168694867 + AT_rich Low_complexity Low_complexity 1 38 0 604 280 213 21 chr5 30936368 30936654 -168693496 - L2 LINE L2 -1 3312 2972 21 0 0 0 chr5 30936660 30936681 -168693469 + AT_rich Low_complexity Low_complexity 1 21 0 2255 98 3 7 chr5 30936710 30937016 -168693134 + AluSx SINE Alu 1 305 -7 348 64 0 0 chr5 30937433 30937480 -168692670 + (CA)n Simple_repeat Simple_repeat 2 48 0 1763 108 0 0 chr5 30937624 30937856 -168692294 - AluSg/x SINE Alu -5 307 76 2129 96 72 86 chr5 30937859 30938261 -168691889 + LTR14B LTR ERVK 3 608 0 5566 54 65 9 chr5 30938261 30939005 -168691145 + HERVK14 LTR ERVK 1 785 -5160 8960 66 25 15 chr5 30939041 30939381 -168690769 + HERV17 LTR ERV1 824 1159 -7467 198 0 0 0 chr5 30939381 30939403 -168690747 + (TA)n Simple_repeat Simple_repeat 1 22 0 8960 66 25 15 chr5 30939403 30940244 -168689906 + HERV17 LTR ERV1 1159 2016 -6610 * 11158 43 5 3 chr5 30940227 30941549 -168688601 + HERV17 LTR ERV1 2430 3754 -4872 1282 20 7 0 chr5 30941528 30941676 -168688474 + HERV17 LTR ERV1 5405 5553 -3073 * 367 41 0 0 chr5 30941675 30941724 -168688426 + HERV17 LTR ERV1 433 481 -8145 * 3519 55 11 16 chr5 30941724 30942380 -168687770 + HERVK14 LTR ERVK 5038 5759 -186 278 249 0 18 chr5 30942380 30942455 -168687695 + MER41C LTR ERV1 1 61 -493 830 19 76 19 chr5 30942455 30942560 -168687590 + HERVK14 LTR ERVK 5835 5945 0 263 85 21 43 chr5 30942563 30942610 -168687540 + LTR14B LTR ERVK 1 46 -562 * 2116 115 85 24 chr5 30942598 30942973 -168687177 + LTR14B LTR ERVK 211 608 0 557 111 0 0 chr5 30942973 30943054 -168687096 - AluJ/FLAM SINE Alu -230 82 2 304 358 118 28 chr5 30943893 30943934 -168686216 - L2 LINE L2 -652 2662 2626 1518 171 112 41 chr5 30943934 30944274 -168685876 - MLT1A1 LTR MaLR -1 364 1 304 358 118 28 chr5 30944274 30944400 -168685750 - L2 LINE L2 -688 2626 2513 1225 201 9 14 chr5 30944400 30944619 -168685531 - MER20 DNA MER1_type 0 219 2 304 358 118 28 chr5 30944619 30944702 -168685448 - L2 LINE L2 -801 2513 2439 2091 111 7 3 chr5 30944702 30944990 -168685160 + AluSq SINE Alu 1 289 -24 304 358 118 28 chr5 30944990 30945128 -168685022 - L2 LINE L2 -875 2439 2237 2321 86 20 0 chr5 30945629 30945933 -168684217 + AluSp SINE Alu 1 310 -3 441 229 153 93 chr5 30946007 30946373 -168683777 + MLT1J1 LTR MaLR 58 445 -1 1279 135 0 30 chr5 30946459 30946659 -168683491 + MSTA LTR MaLR 233 426 -2 8385 147 20 120 chr5 30946659 30947225 -168682925 + MSTA-int LTR MaLR 3 624 -1027 2158 104 7 0 chr5 30947225 30947638 -168682512 - AluSq SINE Alu 0 415 1 8385 147 20 120 chr5 30947638 30948896 -168681254 + MSTA-int LTR MaLR 624 1645 -6 2138 142 67 24 chr5 30948908 30948972 -168681178 + MSTA LTR MaLR 39 99 -329 2487 157 52 0 chr5 30948972 30949379 -168680771 + MSTA LTR MaLR 1 428 0 2138 142 67 24 chr5 30949379 30949688 -168680462 + MSTA LTR MaLR 99 428 0 24 0 0 0 chr5 30950102 30950126 -168680024 + AT_rich Low_complexity Low_complexity 1 24 0 2251 95 6 22 chr5 30950191 30950508 -168679642 + AluSp SINE Alu 1 312 -1 401 178 84 63 chr5 30950833 30951024 -168679126 - L1MC5 LINE L1 -409 7552 7358 260 59 0 0 chr5 30951163 30951197 -168678953 + MLT2C1 LTR ERVL 1 34 -363 402 117 0 0 chr5 30951200 30951260 -168678890 + MLT1E1 LTR MaLR 595 654 0 1655 127 0 4 chr5 30951289 30951525 -168678625 + AluJb SINE Alu 52 286 -26 1850 163 0 22 chr5 30951611 30951939 -168678211 + AluJo SINE Alu 1 321 0 2048 150 0 0 chr5 30952050 30952350 -168677800 - AluJb SINE Alu -12 300 1 330 371 56 35 chr5 30952419 30952705 -168677445 + L2 LINE L2 2976 3267 -5 2337 90 0 3 chr5 30955825 30956126 -168674024 - AluY SINE Alu -11 300 1 600 145 60 0 chr5 30956129 30956246 -168673904 - MER58 DNA MER1_type -34 2386 2263 * 851 208 48 0 chr5 30956240 30956408 -168673742 - MER58 DNA MER1_type -2244 176 1 207 0 0 0 chr5 30956823 30956846 -168673304 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 457 301 119 9 chr5 30957569 30957795 -168672355 + MIR SINE MIR 12 262 0 460 243 118 28 chr5 30958516 30958660 -168671490 - MIR SINE MIR -98 164 8 575 165 220 28 chr5 30959703 30959812 -168670338 - FLAM_C SINE Alu -3 130 1 2405 82 0 13 chr5 30961114 30961429 -168668721 + AluY SINE Alu 1 311 0 2322 119 0 0 chr5 30961837 30962149 -168668001 + AluSx SINE Alu 1 312 0 273 304 51 0 chr5 30962475 30962554 -168667596 + MIR SINE MIR 38 120 -142 1178 84 13 0 chr5 30964785 30964940 -168665210 - L1PA8 LINE L1 -3 6169 6013 192 329 57 0 chr5 30965500 30965570 -168664580 - L2 LINE L2 -10 3303 3230 2040 127 10 0 chr5 30966106 30966398 -168663752 - AluSq SINE Alu -18 295 1 231 320 10 10 chr5 30966558 30966658 -168663492 - LTR16B LTR ERVL -27 437 338 455 289 48 18 chr5 30966677 30966843 -168663307 - LTR16B LTR ERVL -229 235 65 226 329 42 48 chr5 30967153 30967442 -168662708 - L2 LINE L2 -1096 2218 1932 1727 164 27 20 chr5 30968204 30968497 -168661653 - AluJb SINE Alu -17 295 1 1247 95 0 4 chr5 30972378 30972827 -168657323 + (CCAA)n Simple_repeat Simple_repeat 1 446 0 1176 97 30 0 chr5 30973207 30973372 -168656778 + MER41B LTR ERV1 464 633 -2 552 286 93 62 chr5 30973646 30974002 -168656148 + MLT1J LTR MaLR 206 493 -18 4482 125 6 6 chr5 30974561 30975194 -168654956 + MER41B LTR ERV1 1 633 -2 329 277 95 52 chr5 30975972 30976297 -168653853 + HAL1 LINE L1 2169 2507 0 339 25 0 0 chr5 30976697 30976737 -168653413 + (CA)n Simple_repeat Simple_repeat 2 41 0 2074 134 13 0 chr5 30977850 30978155 -168651995 + AluSx SINE Alu 3 311 -1 343 169 0 24 chr5 30978155 30978238 -168651912 + GA-rich Low_complexity Low_complexity 1 81 0 1797 197 153 22 chr5 30978943 30979389 -168650761 + MLT1D LTR MaLR 2 505 0 2292 143 0 15 chr5 30979498 30979840 -168650310 + MER1B DNA MER1_type 1 337 0 1494 227 71 17 chr5 30980130 30980483 -168649667 + MLT1A2 LTR MaLR 3 374 0 2826 185 25 70 chr5 30980667 30980939 -168649211 + MLT1E3 LTR MaLR 1 284 -340 1313 211 21 18 chr5 30980939 30981219 -168648931 + AluJo SINE Alu 1 281 -31 222 37 0 0 chr5 30981223 30981250 -168648900 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2826 185 25 70 chr5 30981250 30981626 -168648524 + MLT1E3 LTR MaLR 287 624 0 398 313 88 32 chr5 30982377 30982751 -168647399 - MLT1L LTR MaLR -33 582 188 278 309 78 54 chr5 30983292 30983496 -168646654 - L2 LINE L2 -557 2757 2549 181 229 83 64 chr5 30984727 30984836 -168645314 - L2 LINE L2 -911 2403 2293 2052 168 33 41 chr5 30985259 30985481 -168644669 - MLT1B LTR MaLR -1 389 170 2436 81 10 0 chr5 30985481 30985789 -168644361 - AluSp SINE Alu -2 311 1 2052 168 33 41 chr5 30985789 30985958 -168644192 - MLT1B LTR MaLR -220 170 1 1809 184 7 0 chr5 30986412 30986722 -168643428 - AluJo SINE Alu 0 312 1 2202 138 0 0 chr5 30986728 30987032 -168643118 - AluSx SINE Alu -8 304 1 524 293 66 0 chr5 30988078 30988245 -168641905 + MIR SINE MIR 20 197 -65 244 138 35 17 chr5 30988500 30988558 -168641592 + (TA)n Simple_repeat Simple_repeat 1 59 0 605 226 0 15 chr5 30989314 30989451 -168640699 - MIR SINE MIR 0 262 128 1338 148 229 4 chr5 30989843 30990087 -168640063 + AluSq SINE Alu 1 299 -4 327 276 0 0 chr5 30990453 30990529 -168639621 + L2 LINE L2 3238 3313 0 1160 262 53 42 chr5 30990538 30990970 -168639180 + HAL1b LINE L1 367 803 -545 778 310 130 46 chr5 30991915 30992889 -168637261 - L2 LINE L2 -1 3271 2222 2033 208 80 4 chr5 30993783 30994235 -168635915 + MLT1E2 LTR MaLR 141 626 0 1927 162 0 3 chr5 30996110 30996407 -168633743 + AluJb SINE Alu 1 296 -16 27 0 0 0 chr5 30996585 30996612 -168633538 + AT_rich Low_complexity Low_complexity 1 27 0 710 136 0 0 chr5 30997398 30997501 -168632649 - FLAM_C SINE Alu -32 111 9 2252 117 10 0 chr5 30997517 30997826 -168632324 - AluSx SINE Alu 0 312 1 196 225 0 0 chr5 30998448 30998488 -168631662 - L2 LINE L2 0 3313 3274 27 0 0 0 chr5 30998720 30998747 -168631403 + AT_rich Low_complexity Low_complexity 1 27 0 1112 53 0 0 chr5 30998747 30998879 -168631271 - AluY SINE Alu -179 132 1 228 282 104 43 chr5 30999448 30999611 -168630539 + L2 LINE L2 1211 1383 -1931 843 327 74 13 chr5 30999691 31000220 -168629930 + L2 LINE L2 1827 2387 -927 1698 268 85 78 chr5 31000435 31001320 -168628830 + HAL1 LINE L1 146 1036 -1471 880 227 40 74 chr5 31001344 31001591 -168628559 + HAL1 LINE L1 1953 2184 -323 243 79 0 0 chr5 31001591 31001629 -168628521 + (TG)n Simple_repeat Simple_repeat 2 39 0 880 227 40 74 chr5 31001629 31001760 -168628390 + HAL1 LINE L1 2184 2318 -189 309 250 14 0 chr5 31001761 31001833 -168628317 + MER116 DNA Mariner 1 73 -7 420 267 124 0 chr5 31001834 31001995 -168628155 + HAL1 LINE L1 2326 2506 -1 46 62 0 0 chr5 31002619 31002700 -168627450 + AT_rich Low_complexity Low_complexity 1 81 0 2643 99 14 11 chr5 31002959 31003324 -168626826 - THE1C LTR MaLR -9 366 1 303 265 41 10 chr5 31005392 31005490 -168624660 + L2 LINE L2 3169 3269 -3 321 252 156 15 chr5 31005750 31005885 -168624265 + MER117 DNA MER1_type 3 156 -41 271 127 42 84 chr5 31006093 31006164 -168623986 + MLT1J1 LTR MaLR 50 117 -329 276 30 0 0 chr5 31006670 31006703 -168623447 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 207 69 0 0 chr5 31007335 31007364 -168622786 + (T)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr5 31007448 31007468 -168622682 + (T)n Simple_repeat Simple_repeat 1 20 0 189 0 0 0 chr5 31008717 31008738 -168621412 + (A)n Simple_repeat Simple_repeat 1 21 0 2519 54 0 10 chr5 31009920 31010233 -168619917 + AluY SINE Alu 1 310 -1 345 47 0 0 chr5 31011557 31011600 -168618550 + (TG)n Simple_repeat Simple_repeat 1 43 0 554 269 12 25 chr5 31015298 31015458 -168614692 - MIR SINE MIR 0 262 105 303 246 15 0 chr5 31015672 31015737 -168614413 - L2 LINE L2 0 3313 3248 2233 117 0 3 chr5 31015913 31016212 -168613938 - AluSx SINE Alu -14 298 1 210 262 106 71 chr5 31016249 31016390 -168613760 - L2 LINE L2 -543 2771 2626 241 263 121 10 chr5 31016948 31017047 -168613103 + MIR SINE MIR 97 206 -56 336 362 73 13 chr5 31017288 31017520 -168612630 + MIR SINE MIR 3 248 -14 195 129 0 0 chr5 31019391 31019422 -168610728 + (CATATA)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr5 31019684 31019708 -168610442 + AT_rich Low_complexity Low_complexity 1 24 0 826 143 66 55 chr5 31019764 31019946 -168610204 - MER20 DNA MER1_type -34 185 2 690 335 23 5 chr5 31021169 31021387 -168608763 - MIR SINE MIR -18 244 23 900 267 105 28 chr5 31021588 31021951 -168608199 - L2 LINE L2 -5 3308 2918 22 0 0 0 chr5 31022242 31022264 -168607886 + AT_rich Low_complexity Low_complexity 1 22 0 1486 11 6 11 chr5 31022645 31022823 -168607327 + L1PA5 LINE L1 5978 6154 0 288 0 0 0 chr5 31024000 31024032 -168606118 + (TG)n Simple_repeat Simple_repeat 1 32 0 251 291 52 112 chr5 31024109 31024254 -168605896 - L2 LINE L2 -420 2894 2742 183 42 0 0 chr5 31024254 31024278 -168605872 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 251 291 52 112 chr5 31024278 31024296 -168605854 - L2 LINE L2 -572 2742 2724 1713 155 30 0 chr5 31024296 31024561 -168605589 - AluJb SINE Alu -39 273 1 251 291 52 112 chr5 31024561 31024647 -168605503 - L2 LINE L2 -590 2724 2659 199 322 63 21 chr5 31024648 31024791 -168605359 - L2 LINE L2 -894 2420 2272 182 200 0 0 chr5 31024902 31024937 -168605213 + L2 LINE L2 3264 3298 -15 1339 154 157 27 chr5 31025085 31025417 -168604733 + THE1C LTR MaLR 1 375 0 9111 145 10 24 chr5 31025419 31027020 -168603130 + MSTA-int LTR MaLR 3 1580 0 1572 141 258 3 chr5 31027020 31027361 -168602789 + MSTA LTR MaLR 1 428 0 1055 267 59 34 chr5 31029705 31030306 -168599844 + L2 LINE L2 2661 3285 -28 653 83 0 0 chr5 31030418 31030502 -168599648 - AluS SINE Alu -228 84 1 1007 225 113 6 chr5 31031061 31031372 -168598778 - MER2 DNA MER2_type 0 344 1 2452 76 0 0 chr5 31032284 31032585 -168597565 - AluSc SINE Alu -8 301 1 395 293 21 21 chr5 31032604 31032744 -168597406 + MER5B DNA MER1_type 37 176 -2 527 252 32 92 chr5 31033597 31033815 -168596335 + L2 LINE L2 3070 3274 -39 1317 43 0 22 chr5 31034001 31034185 -168595965 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 280 111 37 0 chr5 31034187 31034241 -168595909 + CT-rich Low_complexity Low_complexity 3 58 0 1808 151 48 0 chr5 31034243 31034534 -168595616 - AluSx SINE Alu -7 305 1 1658 185 3 7 chr5 31035845 31036132 -168594018 - AluJo SINE Alu -22 290 5 535 323 119 16 chr5 31038306 31038625 -168591525 - L3b LINE CR1 -117 1466 1115 796 303 78 24 chr5 31038901 31039284 -168590866 - MLT1I LTR MaLR -3 406 3 378 269 21 50 chr5 31040218 31040359 -168589791 + MLT1K LTR MaLR 450 586 -2 541 326 46 17 chr5 31041076 31041315 -168588835 - MIR SINE MIR -11 251 6 560 307 0 28 chr5 31041399 31041578 -168588572 - MER91B DNA MER1_type -16 174 1 189 314 80 22 chr5 31043205 31043342 -168586808 - MIR3 SINE MIR -6 202 58 549 284 91 11 chr5 31043730 31043906 -168586244 + L3 LINE CR1 1355 1544 -33 351 238 0 8 chr5 31044110 31044228 -168585922 - L1MC4 LINE L1 -1339 6983 1995 201 74 0 0 chr5 31044230 31044257 -168585893 + (CA)n Simple_repeat Simple_repeat 2 28 0 182 347 31 41 chr5 31044821 31044919 -168585231 - MIR3 SINE MIR -31 177 81 259 277 0 15 chr5 31044951 31045016 -168585134 - MIR3 SINE MIR -23 185 122 319 328 82 6 chr5 31045443 31045614 -168584536 + MIR SINE MIR 65 248 -14 253 156 266 16 chr5 31046939 31047003 -168583147 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr5 31048057 31048078 -168582072 + AT_rich Low_complexity Low_complexity 1 21 0 407 240 58 0 chr5 31048253 31048357 -168581793 + L1ME LINE L1 5508 5617 -504 591 187 9 0 chr5 31049972 31050079 -168580071 - L2 LINE L2 0 3313 3206 1195 303 46 39 chr5 31100113 31100724 -168529426 + HERVL LTR ERVL 3680 4294 -1360 346 341 61 0 chr5 31100813 31100977 -168529173 + LTR16A LTR ERVL 79 252 -198 704 87 0 29 chr5 31103025 31103128 -168527022 + HY3 scRNA scRNA 1 100 -1 2168 110 0 7 chr5 31103420 31103719 -168526431 + AluSx SINE Alu 1 297 -15 2188 102 0 56 chr5 31103737 31104061 -168526089 + AluSx SINE Alu 1 306 -6 1663 160 26 45 chr5 31104374 31104520 -168525630 + AluJb SINE Alu 1 148 -164 2342 97 3 0 chr5 31104520 31104818 -168525332 + AluSp SINE Alu 1 299 -14 1019 184 42 5 chr5 31104771 31104983 -168525167 + AluJb SINE Alu 87 306 -6 1663 160 26 45 chr5 31104818 31104983 -168525167 + AluJb SINE Alu 148 306 -6 566 237 20 20 chr5 31104996 31105148 -168525002 + L1MB8 LINE L1 6027 6178 0 22 88 0 0 chr5 31105297 31105354 -168524796 + AT_rich Low_complexity Low_complexity 1 57 0 23 0 0 0 chr5 31105490 31105513 -168524637 + AT_rich Low_complexity Low_complexity 1 23 0 2214 108 3 0 chr5 31106170 31106467 -168523683 - AluSx SINE Alu -14 298 1 1593 174 23 10 chr5 31107098 31107403 -168522747 + L1MB2 LINE L1 5863 6171 0 30 0 0 0 chr5 31107465 31107495 -168522655 + AT_rich Low_complexity Low_complexity 1 30 0 504 225 69 81 chr5 31107562 31107722 -168522428 - MIR SINE MIR -95 167 10 264 326 82 20 chr5 31107799 31107897 -168522253 - L2 LINE L2 -23 3249 3146 1681 157 40 23 chr5 31108768 31109068 -168521082 + AluJo SINE Alu 1 305 -7 240 35 0 0 chr5 31109265 31109294 -168520856 + (CA)n Simple_repeat Simple_repeat 1 29 0 227 200 18 0 chr5 31109315 31109370 -168520780 + (CA)n Simple_repeat Simple_repeat 2 57 0 1596 231 122 49 chr5 31109875 31110429 -168519721 + MLT1E2 LTR MaLR 4 623 -3 333 68 0 0 chr5 31111572 31111616 -168518534 + (CA)n Simple_repeat Simple_repeat 2 45 0 1979 141 0 13 chr5 31111700 31112005 -168518145 + AluJo SINE Alu 1 301 -11 1340 157 19 9 chr5 31112081 31112297 -168517853 + MER20 DNA MER1_type 1 218 -1 699 242 36 62 chr5 31112698 31112892 -168517258 + MER5A DNA MER1_type 1 189 0 2088 136 3 0 chr5 31113315 31113617 -168516533 + AluJb SINE Alu 1 303 -9 391 272 98 22 chr5 31114113 31114337 -168515813 - L1ME4a LINE L1 -226 5895 5655 313 246 56 14 chr5 31114358 31114496 -168515654 - L1M2 LINE L1 -722 5575 5422 307 289 149 82 chr5 31114704 31115176 -168514974 - L1ME4a LINE L1 -989 5157 4718 769 151 0 17 chr5 31115176 31115295 -168514855 + FLAM_C SINE Alu 1 117 -16 307 289 149 82 chr5 31115295 31115366 -168514784 - L1ME4a LINE L1 -1428 4718 4653 1914 167 45 12 chr5 31115366 31115702 -168514448 - MER7A DNA MER2_type 0 346 2 307 289 149 82 chr5 31115702 31115815 -168514335 - L1ME4a LINE L1 -1493 4653 4456 447 269 88 0 chr5 31116002 31116162 -168513988 - MIR SINE MIR -22 240 67 342 294 100 61 chr5 31116953 31117364 -168512786 - L1ME4a LINE L1 -2028 4118 3692 428 288 184 14 chr5 31117849 31118061 -168512089 - MIR SINE MIR -4 258 11 228 271 139 8 chr5 31118203 31118332 -168511818 - L1ME4a LINE L1 -3264 2882 2737 215 317 33 0 chr5 31119002 31119062 -168511088 + MIR SINE MIR 45 106 -102 2495 83 0 0 chr5 31121012 31121325 -168508825 + AluSq SINE Alu 1 313 0 2224 122 0 13 chr5 31122231 31122367 -168507783 + AluSx SINE Alu 1 137 -175 2427 88 3 0 chr5 31122367 31122674 -168507476 + AluSx SINE Alu 1 308 -4 2224 122 0 13 chr5 31122674 31122848 -168507302 + AluSx SINE Alu 137 307 -5 806 320 96 64 chr5 31124643 31124813 -168505337 + L2 LINE L2 1611 1774 -1540 1199 214 130 49 chr5 31124813 31125159 -168504991 + MLT1A2 LTR MaLR 1 374 0 806 320 96 64 chr5 31125159 31125995 -168504155 + L2 LINE L2 1774 2650 -664 2306 80 40 0 chr5 31126773 31127072 -168503078 + AluY SINE Alu 1 311 0 991 167 13 13 chr5 31127448 31127604 -168502546 - FRAM SINE Alu -10 156 1 730 85 0 0 chr5 31127877 31127971 -168502179 + AluSp/q SINE Alu 211 304 -9 338 289 70 106 chr5 31128001 31128274 -168501876 + L2 LINE L2 2995 3257 -15 222 310 52 9 chr5 31128354 31128470 -168501680 - L2 LINE L2 -1 3271 3151 309 138 52 17 chr5 31130046 31130104 -168500046 - MIR SINE MIR -187 75 16 2124 117 3 0 chr5 31130275 31130573 -168499577 - AluSx SINE Alu -13 299 1 21 0 0 0 chr5 31130582 31130603 -168499547 + AT_rich Low_complexity Low_complexity 1 21 0 184 273 0 45 chr5 31130929 31130995 -168499155 - L3 LINE CR1 -2 1575 1513 1172 170 5 45 chr5 31131017 31131241 -168498909 + AluJo SINE Alu 84 298 -14 885 191 30 6 chr5 31131882 31132050 -168498100 - MER58B DNA MER1_type 0 341 170 944 161 68 6 chr5 31132050 31132211 -168497939 + FAM SINE Alu 1 171 -4 1289 195 17 0 chr5 31132252 31132493 -168497657 - Charlie1a DNA MER1_type -276 1179 935 966 215 139 11 chr5 31132508 31132731 -168497419 - Charlie1a DNA MER1_type -2229 532 339 189 0 0 0 chr5 31132731 31132752 -168497398 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 966 215 139 11 chr5 31132752 31132978 -168497172 - Charlie1a DNA MER1_type -2422 339 4 2376 81 0 10 chr5 31133565 31133872 -168496278 + AluY SINE Alu 8 311 0 945 288 156 9 chr5 31135057 31135487 -168494663 - MLT1J LTR MaLR -16 495 3 542 218 98 12 chr5 31136068 31136231 -168493919 - MER58C DNA MER1_type -1 214 32 1746 173 51 27 chr5 31136335 31136671 -168493479 - MER2 DNA MER2_type 0 344 1 1713 154 13 33 chr5 31137080 31137379 -168492771 + AluJb SINE Alu 1 293 -19 482 286 13 0 chr5 31137390 31137540 -168492610 + MIR SINE MIR 38 188 -63 23 86 0 0 chr5 31138050 31138108 -168492042 + AT_rich Low_complexity Low_complexity 1 58 0 396 0 0 0 chr5 31138425 31138469 -168491681 + (TG)n Simple_repeat Simple_repeat 2 45 0 1258 164 36 86 chr5 31138829 31139109 -168491041 + AluJo SINE Alu 39 304 -8 557 211 134 6 chr5 31139136 31139307 -168490843 - MIR SINE MIR 0 262 70 2219 68 0 58 chr5 31139488 31139798 -168490352 + AluY SINE Alu 1 292 -19 2120 125 0 7 chr5 31140605 31140910 -168489240 + AluJb SINE Alu 1 303 -9 2546 44 0 7 chr5 31141621 31141918 -168488232 + AluY SINE Alu 1 295 -16 1544 171 19 11 chr5 31141985 31142254 -168487896 + AluJo SINE Alu 14 284 -28 23 0 0 0 chr5 31142290 31142313 -168487837 + AT_rich Low_complexity Low_complexity 1 23 0 2243 99 10 0 chr5 31142383 31142677 -168487473 - AluSq SINE Alu -16 297 1 271 310 170 0 chr5 31143603 31143703 -168486447 - MIR SINE MIR -73 135 19 2267 144 40 11 chr5 31143844 31144191 -168485959 - THE1B LTR MaLR -7 357 1 12211 84 23 13 chr5 31144191 31145339 -168484811 - THE1B-int LTR MaLR 0 1580 410 2186 125 3 0 chr5 31145339 31145634 -168484516 + AluSx SINE Alu 1 296 -16 12211 84 23 13 chr5 31145634 31146049 -168484101 - THE1B-int LTR MaLR -1170 410 1 2245 137 41 52 chr5 31146049 31146257 -168483893 - THE1B LTR MaLR 0 364 160 2256 112 3 0 chr5 31146257 31146560 -168483590 + AluSp SINE Alu 1 304 -9 2245 137 41 52 chr5 31146560 31146717 -168483433 - THE1B LTR MaLR -204 160 3 298 143 130 39 chr5 31146800 31146877 -168483273 - LTR23 LTR ERV1 -78 359 276 1962 144 20 10 chr5 31146913 31147211 -168482939 + AluJb SINE Alu 1 301 -11 2338 81 14 0 chr5 31147885 31148181 -168481969 - AluSp SINE Alu -13 300 1 22 0 0 0 chr5 31148388 31148410 -168481740 + AT_rich Low_complexity Low_complexity 1 22 0 552 133 105 0 chr5 31148417 31148522 -168481628 + L1MA4 LINE L1 6178 6293 -7 2445 177 115 0 chr5 31148757 31149210 -168480940 + MLT1D LTR MaLR 1 505 0 340 241 167 0 chr5 31149821 31149929 -168480221 + MIR SINE MIR 84 209 -53 231 61 0 0 chr5 31150468 31150501 -168479649 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 556 231 28 0 chr5 31150552 31150660 -168479490 - L2 LINE L2 0 3313 3203 837 135 7 64 chr5 31150781 31150922 -168479228 - FLAM_C SINE Alu 0 133 1 23 0 0 0 chr5 31151884 31151907 -168478243 + AT_rich Low_complexity Low_complexity 1 23 0 2121 103 0 26 chr5 31152514 31152824 -168477326 + AluY SINE Alu 1 302 -9 2041 134 7 13 chr5 31152894 31153201 -168476949 - AluJo SINE Alu -7 305 1 2385 78 10 7 chr5 31153468 31153775 -168476375 - AluSc SINE Alu -1 308 1 894 229 117 65 chr5 31153776 31154117 -168476033 - L1MA9 LINE L1 -38 6274 5916 2470 38 7 3 chr5 31154672 31154965 -168475185 + AluY SINE Alu 1 294 -17 2423 76 0 7 chr5 31155162 31155465 -168474685 + AluSg SINE Alu 1 301 -9 194 357 57 0 chr5 31156461 31156531 -168473619 + MIR SINE MIR 29 102 -160 226 341 120 29 chr5 31156542 31156750 -168473400 + L2 LINE L2 3046 3272 0 424 263 78 54 chr5 31157892 31158394 -168471756 + L1MC4a LINE L1 4325 4838 -1308 469 290 93 37 chr5 31158394 31158663 -168471487 - MLT1J2 LTR MaLR -8 442 159 372 239 33 0 chr5 31158670 31158762 -168471388 - MLT1J1 LTR MaLR -351 95 1 1672 163 7 34 chr5 31158976 31159270 -168470880 - AluJb SINE Alu -16 296 11 213 94 0 0 chr5 31159282 31159314 -168470836 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 610 318 62 31 chr5 31159317 31159669 -168470481 - HERV16 LTR ERVL -4375 621 259 989 304 43 35 chr5 31159871 31160239 -168469911 - LTR16C LTR ERVL -1 490 120 477 302 12 64 chr5 31160434 31160606 -168469544 + L1MC4a LINE L1 5494 5656 -2152 2113 186 62 105 chr5 31160619 31161003 -168469147 + LTR8A LTR ERV1 1 347 -380 2265 126 3 0 chr5 31161003 31161304 -168468846 - AluSx SINE Alu -10 302 1 2113 186 62 105 chr5 31161304 31161565 -168468585 + LTR8A LTR ERV1 347 618 -109 2691 104 16 16 chr5 31161582 31161957 -168468193 - THE1C LTR MaLR 0 375 1 10779 105 33 11 chr5 31161957 31162014 -168468136 - THE1C-int LTR MaLR 0 1580 1526 2154 117 3 0 chr5 31162014 31162297 -168467853 + AluSx SINE Alu 1 284 -28 366 23 0 0 chr5 31162297 31162340 -168467810 + (CA)n Simple_repeat Simple_repeat 2 44 0 10779 105 33 11 chr5 31162340 31163811 -168466339 - THE1C-int LTR MaLR -53 1527 17 2783 101 13 16 chr5 31163815 31164191 -168465959 - THE1C LTR MaLR 0 375 1 411 117 64 138 chr5 31164194 31164288 -168465862 + LTR8A LTR ERV1 641 727 0 256 309 133 6 chr5 31164311 31164492 -168465658 + L1MC4a LINE L1 5712 5915 -1893 180 111 0 0 chr5 31164498 31164525 -168465625 + (T)n Simple_repeat Simple_repeat 1 27 0 2247 118 42 63 chr5 31164746 31165129 -168465021 + THE1C LTR MaLR 1 375 0 1899 149 10 13 chr5 31165298 31165434 -168464716 + AluJb SINE Alu 1 136 -176 2254 107 3 3 chr5 31165434 31165733 -168464417 + AluSq SINE Alu 1 299 -14 1899 149 10 13 chr5 31165733 31165898 -168464252 + AluJb SINE Alu 136 301 -11 451 302 71 4 chr5 31166117 31166399 -168463751 + L1MC4a LINE L1 4779 5076 -1070 658 282 99 49 chr5 31166541 31167013 -168463137 + L1MC4a LINE L1 5265 5754 -367 598 154 442 24 chr5 31167119 31167327 -168462823 + LTR48 LTR ERV1 1 295 -492 795 184 93 77 chr5 31167346 31167674 -168462476 + LTR48 LTR ERV1 245 784 -3 229 65 0 0 chr5 31167690 31167736 -168462414 - LTR66 LTR ERVL -171 439 394 384 59 0 0 chr5 31167746 31167797 -168462353 + (CA)n Simple_repeat Simple_repeat 2 52 0 1415 164 44 25 chr5 31167799 31168106 -168462044 - AluJb SINE Alu 0 316 5 24 0 0 0 chr5 31168120 31168144 -168462006 + AT_rich Low_complexity Low_complexity 1 24 0 850 242 10 10 chr5 31168151 31168349 -168461801 - MER3 DNA MER1_type -3 206 9 448 277 157 6 chr5 31168387 31168546 -168461604 + MER5A DNA MER1_type 7 189 0 4086 175 150 144 chr5 31169427 31169461 -168460689 + L1MC4a LINE L1 5874 5906 -1902 2243 87 6 10 chr5 31169461 31169772 -168460378 + AluSq SINE Alu 2 311 -2 4086 175 150 144 chr5 31169772 31169810 -168460340 + L1MC4a LINE L1 5906 5942 -1866 207 0 0 0 chr5 31169810 31169833 -168460317 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 676 188 23 30 chr5 31169837 31169970 -168460180 + FLAM_C SINE Alu 2 133 0 4086 175 150 144 chr5 31169970 31170282 -168459868 + L1MC4a LINE L1 5944 6253 -1555 2399 97 0 0 chr5 31170282 31170581 -168459569 + AluSx SINE Alu 1 299 -13 4086 175 150 144 chr5 31170581 31170813 -168459337 + L1MC4a LINE L1 6253 6482 -1326 806 134 7 78 chr5 31170813 31170899 -168459251 - FLAM_C SINE Alu -180 132 58 4302 105 22 2 chr5 31170899 31171489 -168458661 + LTR43 LTR ERV1 1 602 0 806 134 7 78 chr5 31171489 31171544 -168458606 - FLAM_C SINE Alu -254 58 1 4086 175 150 144 chr5 31171544 31172702 -168457448 + L1MC4a LINE L1 6482 7808 0 1902 53 0 4 chr5 31172925 31173188 -168456962 + AluY SINE Alu 59 320 0 4213 149 75 53 chr5 31173189 31173646 -168456504 + L1MB4 LINE L1 5278 5723 -457 261 0 0 0 chr5 31173646 31173675 -168456475 + (TA)n Simple_repeat Simple_repeat 2 30 0 4213 149 75 53 chr5 31173675 31173829 -168456321 + L1MB4 LINE L1 5723 5872 -308 2676 100 14 14 chr5 31173829 31174190 -168455960 + THE1B LTR MaLR 1 361 -3 4213 149 75 53 chr5 31174190 31174331 -168455819 + L1MB4 LINE L1 5872 6008 -172 2152 126 0 0 chr5 31174331 31174625 -168455525 + AluSx SINE Alu 2 295 -17 4213 149 75 53 chr5 31174625 31174736 -168455414 + L1MB4 LINE L1 6008 6162 -18 723 264 48 9 chr5 31175160 31175387 -168454763 + L1M4 LINE L1 3359 3594 -2552 1071 101 89 0 chr5 31175388 31175546 -168454604 - AluSg/x SINE Alu -4 306 135 1038 160 0 0 chr5 31175575 31175725 -168454425 + FRAM SINE Alu 1 150 -16 659 88 29 0 chr5 31175729 31175831 -168454319 + (GGAGAA)n Simple_repeat Simple_repeat 2 106 0 1032 104 0 17 chr5 31175832 31176005 -168454145 + (GAAA)n Simple_repeat Simple_repeat 4 173 0 282 29 0 0 chr5 31176007 31176042 -168454108 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 1000 194 26 67 chr5 31176072 31176340 -168453810 + L1M4 LINE L1 3764 4020 -2126 2260 67 0 11 chr5 31176440 31176724 -168453426 - AluY SINE Alu -30 281 1 342 221 0 0 chr5 31176726 31176821 -168453329 + L1M4 LINE L1 4376 4470 -1676 270 168 80 24 chr5 31176859 31176984 -168453166 + (TTAA)n Simple_repeat Simple_repeat 4 135 0 207 0 0 0 chr5 31177640 31177663 -168452487 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1591 203 130 53 chr5 31177991 31178117 -168452033 + MLT1D LTR MaLR 1 116 -389 863 135 8 30 chr5 31178117 31178250 -168451900 + FLAM_C SINE Alu 1 130 -3 1591 203 130 53 chr5 31178250 31178592 -168451558 + MLT1D LTR MaLR 116 505 0 226 175 100 0 chr5 31178608 31178648 -168451502 - Alu SINE Alu -140 159 116 358 152 45 0 chr5 31178709 31178775 -168451375 - L1MB7 LINE L1 -207 5977 5909 248 245 208 28 chr5 31179104 31179210 -168450940 + L2 LINE L2 3189 3313 0 2492 161 78 33 chr5 31179676 31180228 -168449922 - MER34C LTR ERV1 -5 580 4 370 65 98 33 chr5 31180427 31180519 -168449631 + GA-rich Low_complexity Low_complexity 5 102 0 2083 114 24 0 chr5 31180606 31180895 -168449255 + AluSx SINE Alu 1 296 -16 891 259 62 99 chr5 31181442 31181501 -168448649 - HAL1 LINE L1 0 2507 2447 2411 71 0 0 chr5 31181501 31181783 -168448367 + AluSx SINE Alu 9 290 -22 891 259 62 99 chr5 31181783 31182067 -168448083 - HAL1 LINE L1 -60 2447 2154 2135 151 0 0 chr5 31182067 31182378 -168447772 - AluSx SINE Alu -1 311 1 891 259 62 99 chr5 31182378 31182829 -168447321 - HAL1 LINE L1 -353 2154 1742 267 133 0 0 chr5 31182876 31182921 -168447229 + (TG)n Simple_repeat Simple_repeat 1 45 0 3209 118 35 0 chr5 31182970 31183421 -168446729 - LTR24 LTR ERV1 0 467 1 502 211 90 8 chr5 31183421 31183554 -168446596 - LTR24-int LTR ERV1 0 5123 4980 2104 130 3 0 chr5 31183583 31183883 -168446267 + AluSx SINE Alu 4 304 -8 2017 118 7 0 chr5 31184348 31184618 -168445532 - AluSx SINE Alu -14 298 27 591 232 97 69 chr5 31184618 31184907 -168445243 - LTR9 LTR ERV1 0 612 316 * 1393 184 19 126 chr5 31184881 31185016 -168445134 - LTR9 LTR ERV1 -229 383 235 2521 75 0 0 chr5 31185016 31185321 -168444829 - AluY SINE Alu -1 310 6 1393 184 19 126 chr5 31185321 31185614 -168444536 - LTR9 LTR ERV1 -377 235 1 541 346 39 41 chr5 31185698 31186000 -168444150 - LTR24-int LTR ERV1 -596 6526 6224 2497 163 74 59 chr5 31186000 31186539 -168443611 - LTR10B LTR ERV1 0 547 1 541 346 39 41 chr5 31186539 31186750 -168443400 - LTR24-int LTR ERV1 -898 6224 6014 1265 135 0 50 chr5 31186881 31187118 -168443032 - AluSg/x SINE Alu 0 316 90 507 176 12 0 chr5 31187218 31187303 -168442847 + AluYa5 SINE Alu 84 169 -142 * 680 117 0 19 chr5 31187298 31187401 -168442749 + AluSg/x SINE Alu 198 298 -11 2270 102 0 0 chr5 31187406 31187700 -168442450 + AluSq SINE Alu 1 294 -19 927 172 55 0 chr5 31187784 31187947 -168442203 - AluSg/x SINE Alu -14 296 125 2253 121 0 0 chr5 31188181 31188487 -168441663 + AluSg SINE Alu 5 310 0 2372 95 3 0 chr5 31189142 31189447 -168440703 - AluSp SINE Alu -7 306 1 334 288 35 70 chr5 31190318 31190547 -168439603 - LTR24-int LTR ERV1 -3797 4938 4718 324 305 70 91 chr5 31190928 31191147 -168439003 - LTR24-int LTR ERV1 -4374 4052 3830 1812 119 101 0 chr5 31191147 31191415 -168438735 + AluSg SINE Alu 1 295 -15 324 305 70 91 chr5 31191415 31191599 -168438551 - LTR24-int LTR ERV1 -4596 3830 3660 2288 87 33 3 chr5 31191599 31191899 -168438251 - AluSg1 SINE Alu 0 309 1 324 305 70 91 chr5 31191899 31192012 -168438138 - LTR24-int LTR ERV1 -4766 3660 3546 675 309 102 25 chr5 31192077 31192544 -168437606 - LTR24-int LTR ERV1 -4064 3730 219 682 164 19 0 chr5 31192670 31192774 -168437376 - U6 snRNA snRNA -1 106 1 2125 125 0 0 chr5 31192946 31193234 -168436916 - AluSc SINE Alu -21 288 1 2449 82 3 0 chr5 31194208 31194512 -168435638 - AluY SINE Alu -6 305 1 232 33 67 0 chr5 31194610 31194640 -168435510 + U6 snRNA snRNA 1 32 -75 1037 181 0 0 chr5 31194647 31194813 -168435337 + AluJb SINE Alu 131 296 -16 389 187 0 22 chr5 31194942 31195033 -168435117 + GA-rich Low_complexity Low_complexity 2 90 0 2388 53 0 20 chr5 31195124 31195423 -168434727 + AluY SINE Alu 1 293 -18 481 192 0 29 chr5 31195715 31195819 -168434331 - LTR24-int LTR ERV1 -4378 745 645 1467 218 24 36 chr5 31196146 31196619 -168433531 - LTR24-int LTR ERV1 -4515 608 1 2883 150 17 28 chr5 31196619 31196761 -168433389 - LTR24 LTR ERV1 0 467 325 2372 76 3 16 chr5 31196761 31197064 -168433086 + AluSc SINE Alu 1 299 -10 2883 150 17 28 chr5 31197064 31197393 -168432757 - LTR24 LTR ERV1 -142 325 1 864 221 16 81 chr5 31197393 31197701 -168432449 - HAL1 LINE L1 -835 1672 1385 2115 132 0 3 chr5 31197727 31198031 -168432119 - AluJo SINE Alu -9 303 1 825 259 45 21 chr5 31198057 31198389 -168431761 - HAL1 LINE L1 -1132 1375 1036 312 284 96 76 chr5 31198397 31198434 -168431716 - HAL1 LINE L1 -1674 833 798 2354 70 36 3 chr5 31198434 31198735 -168431415 + AluY SINE Alu 1 311 0 312 284 96 76 chr5 31198735 31198947 -168431203 - HAL1 LINE L1 -1709 798 579 240 267 15 92 chr5 31198982 31199113 -168431037 + HAL1 LINE L1 742 862 -1645 2147 120 0 10 chr5 31199480 31199780 -168430370 - AluSx SINE Alu -11 301 5 359 306 105 8 chr5 31199876 31200029 -168430121 + MIR SINE MIR 49 214 -48 744 289 101 45 chr5 31200347 31200752 -168429398 - LTR33 LTR ERVL 0 521 83 2374 104 3 0 chr5 31200752 31201061 -168429089 + AluSq SINE Alu 2 311 -2 744 289 101 45 chr5 31201061 31201142 -168429008 - LTR33 LTR ERVL -438 83 8 2079 125 17 0 chr5 31202374 31202671 -168427479 + AluSq SINE Alu 1 302 -11 275 296 139 0 chr5 31202936 31203051 -168427099 - MER102a DNA MER1_type -1 329 199 273 302 52 0 chr5 31203087 31203183 -168426967 - MER102a DNA MER1_type -229 101 1 537 203 25 0 chr5 31203192 31203310 -168426840 + MER5B DNA MER1_type 2 122 -56 2451 77 3 0 chr5 31203401 31203699 -168426451 + AluSp SINE Alu 1 299 -14 833 133 126 7 chr5 31203834 31203985 -168426165 - MER3 DNA MER1_type 0 209 41 1826 165 0 46 chr5 31204085 31204412 -168425738 - AluSx SINE Alu 0 312 1 925 172 12 12 chr5 31204497 31204666 -168425484 + FRAM SINE Alu 3 171 -5 2312 94 0 0 chr5 31205510 31205808 -168424342 + AluSx SINE Alu 7 304 -8 2191 114 3 3 chr5 31206157 31206454 -168423696 - AluSx SINE Alu -15 297 1 216 0 0 0 chr5 31206454 31206478 -168423672 + (T)n Simple_repeat Simple_repeat 1 24 0 224 352 65 0 chr5 31206612 31206720 -168423430 - L2 LINE L2 -42 3230 3116 2114 97 3 10 chr5 31207381 31207691 -168422459 + AluSg1 SINE Alu 1 308 -1 1986 137 0 0 chr5 31207752 31208052 -168422098 - AluSx SINE Alu -12 300 1 1009 131 0 0 chr5 31208393 31208546 -168421604 - MER6A DNA MER2_type -1 604 452 1651 186 0 0 chr5 31208546 31208831 -168421319 - AluJb SINE Alu -19 293 9 572 163 0 0 chr5 31208831 31208923 -168421227 - AluJ/FLAM SINE Alu -219 93 2 2661 141 51 0 chr5 31208923 31209357 -168420793 - MER6A DNA MER2_type -149 456 1 2003 133 0 13 chr5 31209428 31209744 -168420406 - AluSx SINE Alu 0 312 1 2225 93 3 3 chr5 31209951 31210253 -168419897 + AluSp SINE Alu 1 302 -11 685 217 49 14 chr5 31210647 31210790 -168419360 + AluJo SINE Alu 4 151 -161 349 89 0 0 chr5 31210790 31210835 -168419315 - Alu SINE Alu -256 45 1 270 278 46 74 chr5 31210840 31210948 -168419202 - MIR SINE MIR -61 147 43 264 264 0 0 chr5 31211158 31211211 -168418939 + L2 LINE L2 3206 3258 -14 1209 150 21 30 chr5 31212054 31212287 -168417863 - AluJo SINE Alu -73 239 9 314 23 23 0 chr5 31212320 31212363 -168417787 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 9270 67 4 9 chr5 31212363 31214331 -168415819 - L1PA6 LINE L1 -24 6130 4170 2422 59 0 7 chr5 31214576 31214882 -168415268 + AluY SINE Alu 1 304 -7 1868 72 0 4 chr5 31216084 31216321 -168413829 + AluSq SINE Alu 2 237 -76 2138 96 0 0 chr5 31216553 31216871 -168413279 - AluSx SINE Alu 0 318 1 1232 249 87 15 chr5 31217277 31217610 -168412540 - LTR16A LTR ERVL -8 442 86 1882 123 0 45 chr5 31217736 31217874 -168412276 + AluSx SINE Alu 1 144 -168 2126 76 59 0 chr5 31217874 31218163 -168411987 + AluSq SINE Alu 3 308 -5 1882 123 0 45 chr5 31218163 31218333 -168411817 + AluSx SINE Alu 144 295 -17 2108 85 7 0 chr5 31218827 31219131 -168411019 + AluSq SINE Alu 1 306 0 2475 207 65 108 chr5 31219835 31219982 -168410168 - L1MC4a LINE L1 0 7808 7656 1250 180 172 8 chr5 31219982 31220238 -168409912 - AluJb SINE Alu -4 298 1 2475 207 65 108 chr5 31220238 31220900 -168409250 - L1MC4a LINE L1 -152 7656 7127 1586 164 33 30 chr5 31220906 31221210 -168408940 - AluJo SINE Alu -7 305 1 685 103 7 267 chr5 31221235 31221360 -168408790 + Charlie5 DNA MER1_type 2403 2480 -144 420 119 0 0 chr5 31221360 31221419 -168408731 + AluJ/FRAM SINE Alu 232 290 -22 685 103 7 267 chr5 31221419 31221535 -168408615 + Charlie5 DNA MER1_type 2480 2624 0 427 257 19 9 chr5 31221562 31221667 -168408483 + MIR SINE MIR 155 260 -2 2156 105 20 0 chr5 31221844 31222150 -168408000 + AluSx SINE Alu 1 312 0 1159 244 8 0 chr5 31222748 31222986 -168407164 - MIR SINE MIR -21 241 2 1198 244 112 27 chr5 31223913 31224351 -168405799 - LTR33 LTR ERVL 0 521 47 560 312 65 96 chr5 31224725 31224926 -168405224 - L2 LINE L2 0 3272 3066 1820 148 3 7 chr5 31224926 31225229 -168404921 + AluJb SINE Alu 1 302 -10 560 312 65 96 chr5 31225229 31225242 -168404908 - L2 LINE L2 -206 3066 3054 1475 166 50 21 chr5 31225242 31225525 -168404625 + AluJo SINE Alu 9 299 -13 2352 76 3 0 chr5 31225527 31225831 -168404319 + AluSp SINE Alu 1 305 -8 560 312 65 96 chr5 31225831 31226265 -168403885 - L2 LINE L2 -219 3053 2659 801 208 13 0 chr5 31226297 31226446 -168403704 - MER58B DNA MER1_type -12 329 179 1999 116 0 0 chr5 31226453 31226768 -168403382 + AluSx SINE Alu 1 315 0 274 317 241 20 chr5 31226861 31227110 -168403040 - L2 LINE L2 -706 2608 2305 714 153 0 0 chr5 31227142 31227253 -168402897 + AluSg/x SINE Alu 193 303 -6 416 327 132 42 chr5 31227290 31227700 -168402450 - L2 LINE L2 -1862 1452 1006 693 174 76 70 chr5 31228383 31228435 -168401715 - MER96 DNA MER1_type? 0 175 125 1349 136 24 16 chr5 31228435 31228685 -168401465 + L1MA4 LINE L1 6044 6295 -5 693 174 76 70 chr5 31228685 31228804 -168401346 - MER96 DNA MER1_type? -50 125 3 23 0 0 0 chr5 31230535 31230558 -168399592 + AT_rich Low_complexity Low_complexity 1 23 0 1898 153 3 6 chr5 31230558 31230871 -168399279 + AluJb SINE Alu 1 312 0 25 31 0 0 chr5 31230901 31230933 -168399217 + AT_rich Low_complexity Low_complexity 1 32 0 2178 105 0 0 chr5 31231450 31231744 -168398406 - AluSx SINE Alu -18 294 1 2366 87 0 0 chr5 31232222 31232533 -168397617 + AluSq SINE Alu 1 311 -2 237 342 60 13 chr5 31232764 31232913 -168397237 + MER5B DNA MER1_type 23 178 0 1910 144 0 0 chr5 31232942 31233240 -168396910 - AluSx SINE Alu -14 298 1 297 306 90 75 chr5 31234170 31234602 -168395548 - L2 LINE L2 0 3313 2874 181 301 185 34 chr5 31234814 31234960 -168395190 - MIR SINE MIR -1 261 94 23 54 0 0 chr5 31236260 31236297 -168393853 + GC_rich Low_complexity Low_complexity 1 37 0 233 191 0 0 chr5 31236393 31236435 -168393715 + (CGG)n Simple_repeat Simple_repeat 3 44 0 282 164 0 0 chr5 31237142 31237197 -168392953 + CT-rich Low_complexity Low_complexity 3 57 0 1242 177 5 0 chr5 31238674 31238883 -168391267 - AluJb SINE Alu -102 210 1 227 282 109 64 chr5 31240026 31240182 -168389968 + MIR SINE MIR 21 183 -79 1668 104 31 62 chr5 31240922 31241210 -168388940 - AluJb SINE Alu -15 297 19 212 367 109 8 chr5 31242194 31242322 -168387828 - L3b LINE CR1 -3 1580 1440 2239 83 0 3 chr5 31242429 31242729 -168387421 - AluSc SINE Alu -10 299 1 435 281 35 0 chr5 31244318 31244432 -168385718 - MIR SINE MIR -2 260 143 1364 234 105 41 chr5 31244433 31244898 -168385252 - MLT1D LTR MaLR -2 503 9 348 349 31 0 chr5 31244907 31245036 -168385114 - MIR SINE MIR -118 144 12 1200 312 68 11 chr5 31245211 31245756 -168384394 + L2 LINE L2 2125 2700 -614 1686 114 49 92 chr5 31245759 31246127 -168384023 - L1MC1 LINE L1 0 6333 5982 843 158 0 0 chr5 31246138 31246271 -168383879 - FLAM_C SINE Alu 0 133 1 310 279 236 13 chr5 31246271 31246508 -168383642 + L2 LINE L2 2688 2977 -337 186 336 29 19 chr5 31246576 31246680 -168383470 + L2 LINE L2 3139 3243 -70 2207 86 0 17 chr5 31246746 31247048 -168383102 + AluSg SINE Alu 1 297 -13 583 284 0 31 chr5 31247324 31247486 -168382664 - MIR SINE MIR -102 160 4 1580 157 26 0 chr5 31248707 31248882 -168381268 - AluJb SINE Alu 0 309 140 245 27 54 0 chr5 31248882 31248919 -168381231 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1809 135 0 54 chr5 31248919 31249216 -168380934 - AluSg SINE Alu -29 281 1 305 24 24 0 chr5 31249222 31249264 -168380886 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1580 157 26 0 chr5 31249264 31249374 -168380776 - AluJb SINE Alu -173 136 9 2118 118 0 10 chr5 31249818 31250132 -168380018 + AluSx SINE Alu 1 311 -1 330 297 51 8 chr5 31250349 31250467 -168379683 + L2 LINE L2 3189 3311 -2 191 149 0 106 chr5 31250782 31250829 -168379321 - L2 LINE L2 0 3313 3272 2141 86 0 0 chr5 31250872 31251177 -168378973 - AluY SINE Alu 0 305 1 1575 250 213 37 chr5 31251230 31252256 -168377894 + L2 LINE L2 1859 3150 -163 2282 88 3 3 chr5 31252256 31252564 -168377586 - AluSg SINE Alu -2 308 1 1575 250 213 37 chr5 31252564 31252763 -168377387 + L2 LINE L2 3150 3313 0 509 238 98 28 chr5 31252761 31252904 -168377246 - MER5B DNA MER1_type -25 153 1 * 1207 328 88 32 chr5 31254255 31254974 -168375176 + L3 LINE CR1 381 1139 -438 216 344 118 53 chr5 31254997 31255717 -168374433 + L2 LINE L2 1007 1679 -1635 2304 71 0 3 chr5 31255717 31256012 -168374138 - AluSg SINE Alu -16 294 1 216 344 118 53 chr5 31256012 31256678 -168373472 + L2 LINE L2 1679 2482 -832 422 321 56 19 chr5 31256722 31256937 -168373213 + L3 LINE CR1 1254 1476 -101 258 279 96 59 chr5 31257059 31257195 -168372955 - MIR SINE MIR -109 153 13 25 0 0 0 chr5 31257424 31257449 -168372701 + AT_rich Low_complexity Low_complexity 1 25 0 1449 184 53 28 chr5 31257449 31257467 -168372683 - AluJo SINE Alu -44 268 252 2786 93 3 8 chr5 31257467 31257844 -168372306 - THE1C LTR MaLR 0 375 1 1449 184 53 28 chr5 31257844 31257989 -168372161 - AluJo SINE Alu -60 252 114 189 0 0 0 chr5 31257989 31258010 -168372140 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 1449 184 53 28 chr5 31258010 31258127 -168372023 - AluJo SINE Alu -198 114 1 186 43 0 0 chr5 31258879 31258902 -168371248 + (T)n Simple_repeat Simple_repeat 1 23 0 270 345 0 61 chr5 31258973 31259121 -168371029 + MIR3 SINE MIR 35 173 -35 2111 131 0 0 chr5 31259121 31259426 -168370724 + AluSq SINE Alu 1 305 0 933 227 9 40 chr5 31259503 31259728 -168370422 - MLT1A1 LTR MaLR 0 365 148 2403 72 0 3 chr5 31259729 31260022 -168370128 - AluY SINE Alu -19 292 1 429 167 0 94 chr5 31260022 31260118 -168370032 - MLT1A1 LTR MaLR -287 87 1 361 311 66 9 chr5 31260338 31260444 -168369706 - MIR3 SINE MIR -36 172 79 204 40 0 0 chr5 31260947 31260972 -168369178 + (TG)n Simple_repeat Simple_repeat 1 25 0 732 185 0 8 chr5 31261255 31261394 -168368756 - FLAM_A SINE Alu 0 138 1 256 279 15 0 chr5 31261397 31261465 -168368685 - MLT1J2 LTR MaLR -37 413 345 483 215 0 0 chr5 31261509 31261630 -168368520 + (CA)n Simple_repeat Simple_repeat 1 121 0 407 239 11 0 chr5 31261860 31261948 -168368202 - MLT1J2 LTR MaLR -121 329 241 276 298 12 0 chr5 31262022 31262106 -168368044 - MLT1J LTR MaLR -324 187 103 184 274 57 89 chr5 31262355 31262479 -168367671 + L2 LINE L2 2933 3052 -220 1886 163 41 24 chr5 31262557 31262926 -168367224 + THE1C LTR MaLR 1 375 0 704 252 36 104 chr5 31264007 31264051 -168366099 - L2 LINE L2 0 3313 3268 2682 50 0 0 chr5 31264051 31264354 -168365796 + AluY SINE Alu 1 303 -8 704 252 36 104 chr5 31264354 31264730 -168365420 - L2 LINE L2 -45 3268 2922 2357 109 0 3 chr5 31264946 31265257 -168364893 - AluSg SINE Alu 0 310 1 321 141 77 67 chr5 31266097 31266224 -168363926 + MER20 DNA MER1_type 5 179 -40 1805 152 34 7 chr5 31266224 31266521 -168363629 + AluJo SINE Alu 1 305 -7 321 141 77 67 chr5 31266521 31266563 -168363587 + MER20 DNA MER1_type 179 219 0 195 42 0 0 chr5 31266951 31266975 -168363175 + (TAA)n Simple_repeat Simple_repeat 2 25 0 579 245 20 26 chr5 31266981 31267132 -168363018 - MIR SINE MIR -10 252 103 2316 49 0 21 chr5 31267504 31267815 -168362335 - AluSg SINE Alu 0 305 1 602 290 96 32 chr5 31267815 31268129 -168362021 - LTR16C LTR ERVL -6 485 152 255 341 18 90 chr5 31268220 31268387 -168361763 - L2 LINE L2 -94 3178 3024 208 192 39 19 chr5 31268718 31268770 -168361380 + MIR SINE MIR 81 133 -75 475 255 31 19 chr5 31268838 31268999 -168361151 - MER5A DNA MER1_type -18 171 9 919 215 63 5 chr5 31269056 31269261 -168360889 - MER20 DNA MER1_type -2 217 1 491 302 151 0 chr5 31269281 31269440 -168360710 - MER5A DNA MER1_type -3 186 4 1523 183 70 45 chr5 31270628 31270783 -168359367 + MLT1A1 LTR MaLR 1 151 -214 2409 94 0 0 chr5 31270783 31271080 -168359070 + AluSx SINE Alu 1 297 -15 1523 183 70 45 chr5 31271080 31271280 -168358870 + MLT1A1 LTR MaLR 151 365 0 192 352 32 24 chr5 31271863 31271988 -168358162 - MIR SINE MIR -29 233 108 1774 176 0 16 chr5 31272786 31273092 -168357058 - AluJb SINE Alu -11 301 1 228 143 0 0 chr5 31273247 31273289 -168356861 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 2176 94 47 3 chr5 31273648 31273947 -168356203 - AluSx SINE Alu 0 312 1 938 224 9 85 chr5 31274419 31274750 -168355400 + L1ME1 LINE L1 5777 6082 -84 299 203 0 192 chr5 31274693 31274875 -168355275 + L1MA10 LINE L1 6185 6331 -3 * 1844 157 31 0 chr5 31275393 31275679 -168354471 - AluJb SINE Alu -17 295 1 243 103 0 0 chr5 31276231 31276270 -168353880 + (TTGTG)n Simple_repeat Simple_repeat 3 41 0 2118 131 6 10 chr5 31276275 31276588 -168353562 - AluSx SINE Alu 0 312 1 2085 141 0 3 chr5 31278014 31278312 -168351838 - AluSx SINE Alu -2 310 14 261 222 44 11 chr5 31278312 31278402 -168351748 + (TA)n Simple_repeat Simple_repeat 2 94 0 263 311 58 0 chr5 31278831 31278934 -168351216 + L3b LINE CR1 1143 1251 -332 279 0 0 0 chr5 31279449 31279480 -168350670 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 108 0 0 chr5 31279967 31280004 -168350146 + (A)n Simple_repeat Simple_repeat 1 37 0 864 308 44 15 chr5 31280339 31280751 -168349399 - L1MC4a LINE L1 -1913 5895 5472 1101 326 106 36 chr5 31280914 31281577 -168348573 + L2 LINE L2 2267 2975 -339 243 273 39 39 chr5 31281716 31281793 -168348357 + L2 LINE L2 3169 3245 -27 235 276 130 55 chr5 31281794 31282048 -168348102 - L1MC4a LINE L1 -1311 4835 4563 478 258 61 49 chr5 31282143 31282278 -168347872 - L1MC5 LINE L1 -36 7925 7793 1951 162 10 0 chr5 31282278 31282581 -168347569 - AluJb SINE Alu -6 306 1 478 258 61 49 chr5 31282581 31282679 -168347471 - L1MC5 LINE L1 -168 7793 7686 2054 89 6 85 chr5 31282679 31282995 -168347155 + AluSg SINE Alu 1 291 -19 478 258 61 49 chr5 31282995 31283024 -168347126 - L1MC5 LINE L1 -275 7686 7659 21 0 0 0 chr5 31283100 31283121 -168347029 + AT_rich Low_complexity Low_complexity 1 21 0 2278 105 3 10 chr5 31283122 31283427 -168346723 - AluSx SINE Alu -9 303 1 368 233 67 60 chr5 31283485 31283635 -168346515 - L1 LINE L1 -1731 4415 4265 227 98 73 0 chr5 31284024 31284065 -168346085 - MLT1B-int LTR MaLR -973 398 355 977 158 395 12 chr5 31284115 31284366 -168345784 - MLT1B-int LTR MaLR -1172 199 1 1302 201 105 30 chr5 31284366 31284729 -168345421 - MLT1B LTR MaLR 0 390 1 1008 247 53 19 chr5 31284745 31285065 -168345085 - MER46C DNA MER2_type -6 332 2 1091 162 0 32 chr5 31285809 31285994 -168344156 - AluSq SINE Alu -1 312 134 228 35 0 0 chr5 31285994 31286023 -168344127 + (TG)n Simple_repeat Simple_repeat 2 30 0 418 230 19 19 chr5 31286025 31286132 -168344018 - L1MC4 LINE L1 -1339 6983 1977 977 106 8 0 chr5 31286132 31286264 -168343886 - AluSq SINE Alu -179 133 1 958 239 138 52 chr5 31287176 31287640 -168342510 - MLT1D LTR MaLR -1 504 1 189 74 0 0 chr5 31287657 31287684 -168342466 + (ATG)n Simple_repeat Simple_repeat 1 27 0 4528 139 239 92 chr5 31287791 31289270 -168340880 - pTR5 LTR ERV1 0 2438 743 2435 96 0 0 chr5 31289983 31290284 -168339866 - AluSg SINE Alu -9 301 1 383 324 35 18 chr5 31290530 31290715 -168339435 + MIR SINE MIR 30 212 -50 2198 106 33 3 chr5 31290863 31291164 -168338986 + AluSx SINE Alu 1 310 -2 184 30 61 0 chr5 31291520 31291553 -168338597 + T-rich Low_complexity Low_complexity 2 36 0 465 28 0 83 chr5 31291554 31291588 -168338562 - MER41B LTR ERV1 -90 545 518 2402 107 0 0 chr5 31291588 31291897 -168338253 + AluSx SINE Alu 1 309 -3 465 28 0 83 chr5 31291897 31291934 -168338216 - MER41B LTR ERV1 -117 518 480 819 242 51 57 chr5 31292039 31292374 -168337776 + MER96B DNA MER1_type? 49 381 -36 234 91 0 0 chr5 31292959 31292992 -168337158 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 1641 145 30 34 chr5 31293050 31293347 -168336803 - AluJo SINE Alu -16 296 1 398 226 49 85 chr5 31293871 31293926 -168336224 - L1ME4a LINE L1 -4 6117 6062 2313 119 0 0 chr5 31293926 31294236 -168335914 + AluSx SINE Alu 1 310 -2 398 226 49 85 chr5 31294236 31294344 -168335806 - L1ME4a LINE L1 -59 6062 5960 2210 84 14 20 chr5 31294620 31294938 -168335212 - AluSc SINE Alu 0 309 1 2581 45 3 10 chr5 31295048 31295357 -168334793 + AluY SINE Alu 1 307 -4 535 262 41 77 chr5 31295371 31295592 -168334558 - MIR SINE MIR -21 241 29 197 314 57 138 chr5 31295777 31296073 -168334077 - L2 LINE L2 -1 3271 3000 927 110 0 0 chr5 31296199 31296317 -168333833 + AluJb SINE Alu 1 118 -194 1421 121 138 104 chr5 31296326 31296624 -168333526 - AluSg SINE Alu -2 308 1 265 359 8 26 chr5 31297319 31297436 -168332714 - MIR SINE MIR -85 177 63 440 272 9 9 chr5 31297479 31297593 -168332557 - MER81 DNA DNA 0 114 1 201 314 0 0 chr5 31297840 31297891 -168332259 + L2 LINE L2 3262 3312 -1 1697 175 21 7 chr5 31297941 31298227 -168331923 - AluSx SINE Alu -22 290 1 329 333 115 16 chr5 31298917 31299100 -168331050 - MIR SINE MIR -15 247 47 190 213 0 64 chr5 31299139 31299186 -168330964 - MIR3 SINE MIR -34 174 131 3476 55 7 0 chr5 31299950 31300387 -168329763 + L1PA8 LINE L1 5732 6171 -1 464 86 14 0 chr5 31300648 31300718 -168329432 + (TC)n Simple_repeat Simple_repeat 1 71 0 1769 199 24 0 chr5 31300750 31301047 -168329103 - AluJb SINE Alu -8 304 1 326 316 80 38 chr5 31301050 31301338 -168328812 - L1ME4a LINE L1 -117 6004 5705 2170 128 0 0 chr5 31301613 31301901 -168328249 + AluSx SINE Alu 1 288 -24 276 53 0 0 chr5 31301910 31301948 -168328202 + (CA)n Simple_repeat Simple_repeat 2 39 0 185 304 152 0 chr5 31302194 31302273 -168327877 - MIR SINE MIR -6 256 166 2151 116 0 7 chr5 31302488 31302782 -168327368 + AluSx SINE Alu 1 292 -20 479 268 31 16 chr5 31302784 31302911 -168327239 + L2 LINE L2 3185 3313 0 2411 89 0 0 chr5 31303284 31303575 -168326575 + AluSc SINE Alu 1 291 -18 1041 208 78 93 chr5 31303611 31303768 -168326382 + MLT1B LTR MaLR 1 159 -269 2118 43 0 4 chr5 31303768 31304012 -168326138 + L1PA5 LINE L1 5893 6137 -17 192 111 0 0 chr5 31304012 31304048 -168326102 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2118 43 0 4 chr5 31304048 31304059 -168326091 + L1PA5 LINE L1 6137 6147 -7 1041 208 78 93 chr5 31304059 31304294 -168325856 + MLT1B LTR MaLR 159 428 0 1871 146 17 3 chr5 31304351 31304638 -168325512 - AluJo SINE Alu -21 291 1 293 270 157 0 chr5 31305323 31305412 -168324738 - MER91C DNA MER1_type -2 138 36 2426 97 0 0 chr5 31305587 31305896 -168324254 - AluSg SINE Alu -1 309 1 1608 150 26 11 chr5 31305947 31306214 -168323936 + AluJo SINE Alu 33 303 -9 2325 105 0 0 chr5 31306384 31306678 -168323472 + AluSx SINE Alu 1 294 -18 660 254 35 69 chr5 31307121 31307246 -168322904 + MIR SINE MIR 22 137 -125 2353 97 7 0 chr5 31307246 31307544 -168322606 + AluSq SINE Alu 1 300 -13 660 254 35 69 chr5 31307544 31307650 -168322500 + MIR SINE MIR 137 245 -17 383 243 59 66 chr5 31308258 31308410 -168321740 + MIR3 SINE MIR 4 154 -54 701 251 78 139 chr5 31308895 31309450 -168320700 - MLT1H1 LTR MaLR -2 553 33 315 285 146 0 chr5 31309694 31309817 -168320333 + MER117 DNA MER1_type 27 167 -30 1134 170 55 0 chr5 31310169 31310369 -168319781 + MSTB1 LTR MaLR 1 211 -221 1281 117 6 0 chr5 31310369 31310549 -168319601 - AluSx SINE Alu -131 181 1 1147 134 6 0 chr5 31310550 31310721 -168319429 + MSTB1 LTR MaLR 259 430 -2 2264 94 0 3 chr5 31311479 31311788 -168318362 + AluY SINE Alu 1 308 -3 2045 176 43 92 chr5 31312955 31313222 -168316928 - MER74A LTR ERVL 0 558 334 2056 117 0 0 chr5 31313222 31313520 -168316630 + AluSx SINE Alu 1 298 -14 2045 176 43 92 chr5 31313520 31313837 -168316313 - MER74A LTR ERVL -224 334 3 203 288 27 41 chr5 31314030 31314103 -168316047 - L2 LINE L2 -89 3183 3112 2136 138 7 54 chr5 31315119 31315395 -168314755 - MLT1B LTR MaLR -4 386 133 2116 115 3 0 chr5 31315395 31315699 -168314451 - AluY SINE Alu -6 305 1 2136 138 7 54 chr5 31315699 31315827 -168314323 - MLT1B LTR MaLR -257 133 1 263 343 46 0 chr5 31316458 31316566 -168313584 - L2 LINE L2 -2 3270 3158 350 244 193 0 chr5 31316568 31316687 -168313463 - LTR67 LTR ERVL -2 555 414 254 208 28 28 chr5 31316858 31316930 -168313220 - MLT1J LTR MaLR -330 181 110 * 656 258 36 18 chr5 31316871 31317038 -168313112 - LTR67 LTR ERVL -385 172 3 3675 130 36 34 chr5 31317143 31317782 -168312368 - MER39B LTR ERV1 -13 640 1 251 138 15 77 chr5 31317820 31317885 -168312265 - L2 LINE L2 -218 3054 2994 189 0 0 0 chr5 31318216 31318237 -168311913 + (T)n Simple_repeat Simple_repeat 1 21 0 564 276 232 28 chr5 31318577 31319085 -168311065 + L2 LINE L2 2366 2977 -337 2104 112 7 0 chr5 31319385 31319689 -168310461 - AluSx SINE Alu -6 306 1 2250 77 0 0 chr5 31320302 31320620 -168309530 - AluSq SINE Alu 0 318 1 2413 72 3 0 chr5 31321023 31321328 -168308822 + AluSp SINE Alu 1 306 -7 2189 103 0 22 chr5 31321750 31322061 -168308089 + AluSp SINE Alu 1 304 -9 319 287 96 30 chr5 31322709 31322876 -168307274 + MIR3 SINE MIR 4 181 -27 2102 116 0 0 chr5 31322949 31323241 -168306909 + AluSq SINE Alu 1 292 -21 2284 150 57 15 chr5 31323508 31323915 -168306235 - MSTA LTR MaLR 0 428 5 2137 74 30 10 chr5 31324127 31324424 -168305726 + AluSq SINE Alu 1 303 -10 2232 76 3 7 chr5 31324424 31324727 -168305423 + AluY SINE Alu 1 302 -9 687 148 83 134 chr5 31324820 31325036 -168305114 - MER20 DNA MER1_type -14 205 1 810 139 7 40 chr5 31325550 31325723 -168304427 - AluSg/x SINE Alu 0 302 135 2318 74 23 0 chr5 31325805 31326104 -168304046 - AluSq SINE Alu -7 306 1 392 336 32 23 chr5 31326117 31326292 -168303858 - MIR SINE MIR -63 145 16 2112 103 0 0 chr5 31326521 31326835 -168303315 - AluSx SINE Alu 0 314 1 464 0 18 0 chr5 31327262 31327318 -168302832 + (TG)n Simple_repeat Simple_repeat 2 58 0 2582 175 56 62 chr5 31328034 31328652 -168301498 - L1MB5 LINE L1 0 6174 5556 434 358 16 21 chr5 31328688 31328875 -168301275 - L3 LINE CR1 -2 1575 1390 2147 121 0 0 chr5 31329431 31329736 -168300414 - AluSx SINE Alu -7 305 1 277 122 20 0 chr5 31329755 31329804 -168300346 - L1ME3A LINE L1 -5 6165 6116 * 654 229 51 11 chr5 31329785 31329960 -168300190 + L1ME3A LINE L1 5878 6059 -111 715 269 164 21 chr5 31330126 31330412 -168299738 + MLT1K LTR MaLR 77 403 -185 3940 187 50 50 chr5 31330488 31331020 -168299130 - MER21B LTR ERV1 -14 849 315 2164 111 3 0 chr5 31331020 31331326 -168298824 - AluSx SINE Alu -5 307 1 3940 187 50 50 chr5 31331326 31331642 -168298508 - MER21B LTR ERV1 -547 316 1 1079 79 0 7 chr5 31332224 31332364 -168297786 + AluSq/x SINE Alu 1 139 -173 2196 96 0 3 chr5 31332374 31332677 -168297473 + AluSc SINE Alu 3 304 -5 2443 130 61 30 chr5 31333416 31333823 -168296327 + MSTB LTR MaLR 5 424 -2 2504 46 7 0 chr5 31333887 31334193 -168295957 - AluY SINE Alu -3 308 1 606 279 34 17 chr5 31334529 31334708 -168295442 - MIR SINE MIR 0 262 81 231 36 0 0 chr5 31335434 31335462 -168294688 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 2129 108 0 0 chr5 31335612 31335907 -168294243 - AluSx SINE Alu -17 295 1 489 301 72 28 chr5 31335923 31336247 -168293903 + L1ME4a LINE L1 5543 5886 -235 8203 113 22 17 chr5 31336247 31336952 -168293198 - HSMAR2 DNA Mariner -1 1301 586 2480 57 0 16 chr5 31336952 31337268 -168292882 + AluY SINE Alu 1 311 0 8203 113 22 17 chr5 31337268 31337857 -168292293 - HSMAR2 DNA Mariner -716 586 1 489 301 72 28 chr5 31337857 31337891 -168292259 + L1ME4a LINE L1 5886 5917 -204 252 0 0 0 chr5 31337906 31337934 -168292216 + (CA)n Simple_repeat Simple_repeat 2 29 0 332 253 40 10 chr5 31337968 31338067 -168292083 + HAL1b LINE L1 1243 1344 -4 21 0 0 0 chr5 31338073 31338094 -168292056 + AT_rich Low_complexity Low_complexity 1 21 0 252 245 104 28 chr5 31338242 31338348 -168291802 + MIR SINE MIR 19 132 -130 506 262 33 86 chr5 31339296 31339540 -168290610 + MIR SINE MIR 11 241 -21 1736 134 62 7 chr5 31339885 31340175 -168289975 - AluJb SINE Alu -6 306 1 208 294 0 0 chr5 31340389 31340440 -168289710 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 2202 70 0 11 chr5 31341506 31341830 -168288320 + AluY SINE Alu 1 321 0 463 220 0 11 chr5 31342072 31342163 -168287987 + L2 LINE L2 3224 3313 0 392 304 51 0 chr5 31343049 31343187 -168286963 + MER117 DNA MER1_type 53 197 0 239 224 141 0 chr5 31343261 31343346 -168286804 + MER94 DNA DNA 4 100 -34 1191 187 20 103 chr5 31343489 31343612 -168286538 - MER39 LTR ERV1 -3 704 572 2078 91 7 7 chr5 31343612 31343899 -168286251 + AluSg SINE Alu 2 288 -22 1191 187 20 103 chr5 31343899 31344154 -168285996 - MER39 LTR ERV1 -135 572 322 391 217 85 47 chr5 31344997 31345126 -168285024 + MIR SINE MIR 16 149 -59 2253 91 0 0 chr5 31346140 31346438 -168283712 - AluSg SINE Alu -12 298 1 772 255 119 118 chr5 31347095 31347677 -168282473 - L2 LINE L2 -1 3312 2711 2070 114 7 0 chr5 31347677 31347974 -168282176 + AluSq SINE Alu 1 299 -14 772 255 119 118 chr5 31347974 31348264 -168281886 - L2 LINE L2 -602 2711 2423 1568 154 0 97 chr5 31348786 31348983 -168281167 - AluJo SINE Alu -7 305 151 2112 117 3 0 chr5 31348983 31349292 -168280858 + AluSq SINE Alu 1 310 -3 1568 154 0 97 chr5 31349292 31349425 -168280725 - AluJo SINE Alu -161 151 7 187 311 16 0 chr5 31349681 31349742 -168280408 + L2 LINE L2 3247 3308 -5 309 253 85 117 chr5 31349893 31350090 -168280060 - Charlie8 DNA MER1_type -2036 381 195 1476 142 13 4 chr5 31350090 31350354 -168279796 + AluSx SINE Alu 54 319 0 309 253 85 117 chr5 31350354 31350471 -168279679 - Charlie8 DNA MER1_type -2222 195 76 390 383 6 23 chr5 31351375 31351550 -168278600 + MIR3 SINE MIR 14 185 -23 215 340 0 0 chr5 31353044 31353097 -168277053 + L2 LINE L2 3162 3214 -58 1668 172 3 16 chr5 31353718 31354026 -168276124 + AluJo SINE Alu 1 304 -8 2245 80 0 3 chr5 31354026 31354325 -168275825 + AluY SINE Alu 1 298 -13 224 333 123 0 chr5 31354878 31354992 -168275158 + L2 LINE L2 3145 3272 0 2052 92 23 33 chr5 31356258 31356562 -168273588 - AluSx SINE Alu -11 301 1 183 273 146 0 chr5 31356964 31357019 -168273131 - L2 LINE L2 -37 3276 3214 328 250 111 9 chr5 31357247 31357355 -168272795 + L2 LINE L2 3189 3307 -6 1901 144 3 7 chr5 31357357 31357662 -168272488 + AluSx SINE Alu 1 304 -8 2465 121 68 34 chr5 31358222 31358296 -168271854 - MSTA LTR MaLR 0 428 358 2093 125 0 0 chr5 31358296 31358593 -168271557 + AluSx SINE Alu 1 297 -15 2465 121 68 34 chr5 31358593 31358932 -168271218 - MSTA LTR MaLR -70 358 1 1084 436 21 14 chr5 31358990 31359298 -168270852 - AluSp SINE Alu 0 311 2 551 261 56 0 chr5 31360320 31360481 -168269669 + L1M3d LINE L1 3 172 -5719 21 0 0 0 chr5 31360579 31360600 -168269550 + AT_rich Low_complexity Low_complexity 1 21 0 2240 123 0 0 chr5 31361530 31361831 -168268319 + AluSx SINE Alu 1 301 -11 1980 157 0 26 chr5 31362624 31362936 -168267214 + AluJb SINE Alu 1 304 -8 1718 171 0 38 chr5 31363111 31363426 -168266724 - AluJb SINE Alu -9 303 1 2147 98 17 7 chr5 31363467 31363762 -168266388 - AluSq SINE Alu -15 298 1 2295 99 0 10 chr5 31363762 31364066 -168266084 - AluSx SINE Alu -11 301 1 181 242 22 77 chr5 31364292 31364383 -168265767 + MER5C DNA MER1_type 174 259 -65 2344 101 3 3 chr5 31365095 31365393 -168264757 + AluSg SINE Alu 1 298 -12 269 290 140 11 chr5 31368544 31368637 -168261513 + MIR3 SINE MIR 58 162 -46 2874 138 74 8 chr5 31368790 31369304 -168260846 + LTR10A LTR ERV1 8 555 -54 1854 149 3 40 chr5 31370093 31370389 -168259761 + AluSx SINE Alu 4 288 -24 401 290 85 25 chr5 31370448 31370639 -168259511 + MIR SINE MIR 6 215 -47 332 259 104 94 chr5 31371098 31371165 -168258985 - L1ME4a LINE L1 -11 6110 6045 2220 115 0 16 chr5 31371165 31371477 -168258673 + AluSq SINE Alu 1 307 -6 332 259 104 94 chr5 31371477 31371610 -168258540 - L1ME4a LINE L1 -76 6045 5908 712 232 57 31 chr5 31371613 31371807 -168258343 + MER63A DNA MER1_type 4 202 -8 378 0 0 0 chr5 31372398 31372440 -168257710 + (TG)n Simple_repeat Simple_repeat 2 43 0 321 284 25 90 chr5 31373418 31373619 -168256531 + L2 LINE L2 2457 2644 -670 858 107 23 46 chr5 31373678 31373690 -168256460 - AluSg SINE Alu -182 128 117 402 21 0 0 chr5 31373690 31373737 -168256413 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 858 107 23 46 chr5 31373737 31373855 -168256295 - AluSg SINE Alu -193 117 1 1691 136 0 45 chr5 31373855 31374170 -168255980 - AluSx SINE Alu 0 333 31 4768 131 132 99 chr5 31374170 31375988 -168254162 + pTR5 LTR ERV1 743 2438 0 249 88 0 0 chr5 31375991 31376025 -168254125 - AluSx SINE Alu -269 34 1 2586 40 7 0 chr5 31376615 31376914 -168253236 - AluY SINE Alu -10 301 1 264 354 53 35 chr5 31376918 31377031 -168253119 + L2 LINE L2 3154 3268 -4 361 269 86 30 chr5 31378074 31378271 -168251879 - MLT1L LTR MaLR -234 381 174 2336 122 0 0 chr5 31378373 31378684 -168251466 + AluSx SINE Alu 1 311 -1 741 119 23 160 chr5 31379429 31379648 -168250502 - MER53 DNA DNA 0 189 1 308 250 50 100 chr5 31379764 31379944 -168250206 + MER5A DNA MER1_type 18 188 -1 2342 111 0 0 chr5 31379949 31380255 -168249895 - AluSx SINE Alu -6 306 1 231 94 0 0 chr5 31380377 31380409 -168249741 + L2 LINE L2 3282 3313 0 2488 75 0 0 chr5 31381868 31382160 -168247990 + AluSg SINE Alu 1 292 -18 331 227 21 62 chr5 31382582 31382696 -168247454 - L1MC4 LINE L1 -1339 6983 1996 1803 164 0 7 chr5 31382696 31382982 -168247168 - AluJo SINE Alu -28 284 1 558 207 95 0 chr5 31383924 31384040 -168246110 - MIR3 SINE MIR -16 192 66 320 253 13 13 chr5 31384923 31385002 -168245148 + MIR3 SINE MIR 121 199 -9 2349 105 0 0 chr5 31385330 31385625 -168244525 + AluSq SINE Alu 1 295 -18 2326 62 7 3 chr5 31385625 31385940 -168244210 + AluY SINE Alu 1 311 0 472 246 112 27 chr5 31386256 31386656 -168243494 - MLT1J LTR MaLR -4 507 1 2113 107 38 0 chr5 31386886 31387175 -168242975 + AluSq SINE Alu 1 300 -13 2094 78 37 7 chr5 31387348 31387638 -168242512 - AluSc SINE Alu 0 298 1 2586 72 0 0 chr5 31387931 31388237 -168241913 - AluY SINE Alu -5 306 1 2521 69 3 16 chr5 31388548 31388865 -168241285 + AluSp SINE Alu 1 313 0 292 258 0 0 chr5 31389260 31389326 -168240824 - MLT1J LTR MaLR -331 180 115 419 260 10 106 chr5 31389530 31389657 -168240493 + MIR SINE MIR 3 100 -162 2120 126 7 3 chr5 31389657 31389958 -168240192 - AluSx SINE Alu -10 302 1 419 260 10 106 chr5 31389958 31390063 -168240087 + MIR SINE MIR 100 213 -49 2197 101 3 10 chr5 31390073 31390379 -168239771 - AluSx SINE Alu -8 304 1 184 294 20 0 chr5 31390391 31390442 -168239708 + MIR SINE MIR 211 262 0 567 255 50 6 chr5 31390551 31390712 -168239438 + L2 LINE L2 2849 3016 -297 2127 105 11 3 chr5 31390765 31391051 -168239099 + AluSx SINE Alu 1 288 -24 356 276 216 32 chr5 31391414 31391599 -168238551 + L2 LINE L2 3095 3313 0 2326 81 0 31 chr5 31391626 31391947 -168238203 - AluY SINE Alu 0 311 1 230 83 0 0 chr5 31391980 31392016 -168238134 - L1MA3 LINE L1 0 6305 6270 660 188 12 69 chr5 31392379 31392539 -168237611 - MER106B DNA MER1_type -908 151 1 393 286 97 7 chr5 31393889 31394043 -168236107 + L2 LINE L2 3145 3312 -1 2458 58 0 49 chr5 31394156 31394483 -168235667 - AluY SINE Alu 0 311 1 211 303 15 0 chr5 31394592 31394658 -168235492 - L2 LINE L2 -21 3251 3185 229 121 0 0 chr5 31394659 31394692 -168235458 + Alu SINE Alu 81 113 -187 1337 90 0 0 chr5 31394706 31394873 -168235277 - AluSg SINE Alu -143 167 1 200 250 0 21 chr5 31395257 31395305 -168234845 - L2 LINE L2 -8 3264 3218 191 344 31 42 chr5 31395409 31395505 -168234645 - L2 LINE L2 -191 3081 2987 2841 179 62 7 chr5 31397385 31397950 -168232200 - MER77 LTR ERV1 -9 596 1 621 285 75 11 chr5 31398093 31398360 -168231790 - LTR33 LTR ERVL -237 284 1 487 278 117 29 chr5 31398839 31399044 -168231106 + MIR SINE MIR 13 235 -27 239 288 38 12 chr5 31399361 31399441 -168230709 + MIR SINE MIR 20 101 -107 230 292 45 11 chr5 31399559 31399648 -168230502 - MIR SINE MIR -86 122 31 1877 203 48 67 chr5 31399823 31399881 -168230269 - MER74B LTR ERVL 0 622 564 2604 53 0 0 chr5 31399881 31400184 -168229966 + AluY SINE Alu 1 303 -8 1877 203 48 67 chr5 31400184 31400325 -168229825 - MER74B LTR ERVL -58 564 422 1594 184 0 24 chr5 31400325 31400641 -168229509 - AluJo SINE Alu 0 313 5 1877 203 48 67 chr5 31400641 31401000 -168229150 - MER74B LTR ERVL -200 422 71 1899 162 0 22 chr5 31401000 31401314 -168228836 + AluJo SINE Alu 5 311 -1 366 267 38 29 chr5 31401785 31401890 -168228260 - MIR SINE MIR -153 109 4 1832 141 0 42 chr5 31402154 31402467 -168227683 + AluSx SINE Alu 1 300 -12 1877 174 140 17 chr5 31402925 31403339 -168226811 + MLT1C LTR MaLR 1 465 -2 2470 97 0 3 chr5 31404179 31404487 -168225663 - AluSq SINE Alu -6 307 1 223 294 59 24 chr5 31404623 31404708 -168225442 + MIR SINE MIR 156 243 -19 320 363 44 25 chr5 31405762 31405922 -168224228 - MIR3 SINE MIR -27 181 19 2304 104 3 10 chr5 31405946 31406255 -168223895 + AluSx SINE Alu 1 307 -5 2391 74 0 37 chr5 31407493 31407816 -168222334 - AluY SINE Alu 0 311 1 1486 144 32 36 chr5 31408222 31408500 -168221650 - AluSx SINE Alu -18 294 18 2223 113 0 0 chr5 31408922 31409253 -168220897 + AluSx SINE Alu 1 331 0 476 279 8 0 chr5 31409516 31409645 -168220505 + Charlie7 DNA MER1_type 116 245 -2367 830 183 0 0 chr5 31409686 31409817 -168220333 - AluJo SINE Alu -45 267 137 1912 247 84 52 chr5 31409849 31409959 -168220191 + Charlie7 DNA MER1_type 307 412 -2200 735 176 0 22 chr5 31409959 31410095 -168220055 - AluJo SINE Alu -169 133 1 1912 247 84 52 chr5 31410095 31410383 -168219767 + Charlie7 DNA MER1_type 412 689 -1923 2650 55 0 0 chr5 31410383 31410690 -168219460 + AluY SINE Alu 1 307 -4 1912 247 84 52 chr5 31410690 31411100 -168219050 + Charlie7 DNA MER1_type 689 1142 -1470 801 153 0 0 chr5 31411100 31411218 -168218932 + AluJb SINE Alu 1 118 -194 22 35 0 0 chr5 31411231 31411260 -168218890 + AT_rich Low_complexity Low_complexity 1 29 0 2202 228 94 75 chr5 31411263 31411483 -168218667 + Charlie7 DNA MER1_type 1128 1343 -1269 5014 131 65 43 chr5 31411483 31411766 -168218384 - MER4D LTR ERV1 0 903 628 1864 126 24 0 chr5 31411766 31412059 -168218091 + AluSx SINE Alu 12 311 -1 5014 131 65 43 chr5 31412059 31412175 -168217975 - MER4D LTR ERV1 -275 628 516 2177 118 0 6 chr5 31412175 31412488 -168217662 + AluSq SINE Alu 1 311 -2 5014 131 65 43 chr5 31412488 31412971 -168217179 - MER4D LTR ERV1 -387 516 1 2202 228 94 75 chr5 31412971 31413221 -168216929 + Charlie7 DNA MER1_type 1343 1587 -1025 2482 54 0 0 chr5 31413221 31413517 -168216633 + AluY SINE Alu 1 296 -15 2202 228 94 75 chr5 31413517 31414116 -168216034 + Charlie7 DNA MER1_type 1587 2174 -438 2367 60 0 10 chr5 31414116 31414417 -168215733 + AluY SINE Alu 1 298 -13 2202 228 94 75 chr5 31414417 31414428 -168215722 + Charlie7 DNA MER1_type 2174 2183 -429 1983 130 3 0 chr5 31414428 31414720 -168215430 + AluSx SINE Alu 3 295 -17 2202 228 94 75 chr5 31414720 31414843 -168215307 + Charlie7 DNA MER1_type 2183 2356 -256 204 97 0 0 chr5 31414860 31414891 -168215259 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 1855 150 0 0 chr5 31414891 31415178 -168214972 - AluSx SINE Alu -25 287 1 1848 154 0 7 chr5 31415180 31415486 -168214664 - AluJb SINE Alu -8 304 1 730 284 52 55 chr5 31416354 31416589 -168213561 - L1MC4a LINE L1 -1876 5932 5697 2147 123 0 0 chr5 31416589 31416891 -168213259 + AluSx SINE Alu 1 302 -10 730 284 52 55 chr5 31416891 31417095 -168213055 - L1MC4a LINE L1 -2111 5697 5494 1987 148 75 0 chr5 31417285 31417617 -168212533 - LTR45B LTR ERV1 -131 358 2 31 26 0 0 chr5 31417742 31417780 -168212370 + AT_rich Low_complexity Low_complexity 1 38 0 549 31 0 0 chr5 31417780 31417844 -168212306 - U6 snRNA snRNA -31 76 13 322 228 186 80 chr5 31417893 31418205 -168211945 - L1ME LINE L1 -467 5654 5310 33 25 0 0 chr5 31418444 31418484 -168211666 + AT_rich Low_complexity Low_complexity 1 40 0 2343 76 0 0 chr5 31418602 31418893 -168211257 - AluSc SINE Alu -18 291 1 4032 67 13 4 chr5 31418897 31419432 -168210718 - L1PA8 LINE L1 -4 6168 5629 1073 137 33 11 chr5 31419483 31419665 -168210485 - AluJb SINE Alu -7 305 120 252 0 0 0 chr5 31420367 31420395 -168209755 + (A)n Simple_repeat Simple_repeat 1 28 0 1873 127 3 13 chr5 31420408 31420707 -168209443 + AluSg SINE Alu 12 307 -3 551 230 26 0 chr5 31420808 31420921 -168209229 + MLT1E3 LTR MaLR 317 432 -192 2060 187 104 6 chr5 31420921 31421391 -168208759 - MER34 LTR ERV1 0 542 27 651 185 196 35 chr5 31421396 31421569 -168208581 + MLT1E3 LTR MaLR 424 624 0 599 184 0 0 chr5 31421792 31421895 -168208255 + U13 snRNA snRNA 1 103 -1 234 196 22 0 chr5 31421941 31421987 -168208163 + MIR SINE MIR 103 149 -113 344 253 22 0 chr5 31422069 31422160 -168207990 + MIR SINE MIR 164 256 -6 211 352 11 0 chr5 31422969 31423057 -168207093 - MIR SINE MIR 0 262 174 2189 104 0 10 chr5 31423601 31423900 -168206250 + AluSx SINE Alu 1 296 -16 523 267 95 25 chr5 31423994 31424178 -168205972 - MIR SINE MIR -68 140 2 274 333 34 8 chr5 31424401 31424518 -168205632 - L2 LINE L2 0 3313 3194 2250 113 3 0 chr5 31424621 31424932 -168205218 + AluSx SINE Alu 1 312 0 3339 196 104 6 chr5 31424935 31425701 -168204449 - L1MB8 LINE L1 0 6178 5316 1417 194 3 45 chr5 31425701 31426011 -168204139 - AluJo SINE Alu -15 297 1 3339 196 104 6 chr5 31426011 31426121 -168204029 - L1MB8 LINE L1 -862 5316 5218 931 265 31 14 chr5 31426118 31426341 -168203809 - L1M4 LINE L1 -6039 503 277 * 544 209 0 0 chr5 31426343 31426453 -168203697 - L1M4 LINE L1 -6409 133 24 287 313 78 39 chr5 31426483 31426544 -168203606 - L1ME3A LINE L1 -5 6165 6108 1843 116 46 3 chr5 31426544 31426828 -168203322 - AluSx SINE Alu -16 296 1 287 313 78 39 chr5 31426828 31426945 -168203205 - L1ME3A LINE L1 -62 6108 5980 1905 141 20 3 chr5 31426982 31427280 -168202870 + AluSx SINE Alu 1 303 -9 2408 42 0 36 chr5 31427380 31427687 -168202463 - AluY SINE Alu -15 296 1 22 56 0 0 chr5 31427711 31427747 -168202403 + AT_rich Low_complexity Low_complexity 1 36 0 1013 76 8 0 chr5 31428413 31428545 -168201605 + AluSc SINE Alu 1 133 -176 2269 78 7 13 chr5 31428545 31428678 -168201472 + AluSc SINE Alu 1 133 -176 2336 77 0 3 chr5 31428678 31428976 -168201174 + AluSc SINE Alu 1 297 -12 2269 78 7 13 chr5 31428976 31429149 -168201001 + AluSc SINE Alu 133 305 -4 820 148 0 0 chr5 31429263 31429391 -168200759 - FLAM_C SINE Alu -2 141 14 1204 200 17 4 chr5 31429396 31429626 -168200524 + L1MB3 LINE L1 5912 6144 -39 533 122 0 0 chr5 31429650 31429724 -168200426 + U6 snRNA snRNA 1 74 -33 2101 93 0 3 chr5 31429744 31430035 -168200115 + AluSx SINE Alu 1 290 -22 319 73 0 0 chr5 31430035 31430081 -168200069 + L1MB4 LINE L1 6131 6179 -1 1851 168 3 0 chr5 31430398 31430707 -168199443 + AluJb SINE Alu 1 310 -2 581 105 0 0 chr5 31430707 31430783 -168199367 - AluY SINE Alu -223 88 13 649 117 0 0 chr5 31430783 31430877 -168199273 + AluSg/x SINE Alu 216 309 0 1468 66 0 0 chr5 31431919 31432100 -168198050 + L1PA5 LINE L1 5966 6146 -8 189 132 0 0 chr5 31432100 31432138 -168198012 + (TA)n Simple_repeat Simple_repeat 1 38 0 2143 95 10 0 chr5 31432549 31432843 -168197307 + AluSq SINE Alu 1 297 -16 270 290 48 0 chr5 31433011 31433073 -168197077 + L2 LINE L2 3202 3266 -6 1932 127 13 20 chr5 31433441 31433741 -168196409 - AluSx SINE Alu -14 298 1 1913 130 10 10 chr5 31433950 31434288 -168195862 + AluSx SINE Alu 1 312 0 215 360 64 0 chr5 31434441 31434566 -168195584 - MIR3 SINE MIR -38 170 38 2108 111 0 7 chr5 31434654 31434951 -168195199 + AluSx SINE Alu 1 295 -17 833 192 0 29 chr5 31434951 31435123 -168195027 + AluJb SINE Alu 134 300 -12 30 0 0 0 chr5 31435252 31435282 -168194868 + AT_rich Low_complexity Low_complexity 1 30 0 1778 128 0 0 chr5 31435317 31435568 -168194582 - AluSq SINE Alu -58 255 5 230 260 0 52 chr5 31436789 31436885 -168193265 - AluYb8 SINE Alu -96 212 122 22 0 0 0 chr5 31438886 31438908 -168191242 + AT_rich Low_complexity Low_complexity 1 22 0 331 202 4 130 chr5 31439350 31439603 -168190547 - AluSg SINE Alu -19 281 61 855 142 32 53 chr5 31439992 31440182 -168189968 + MER53 DNA DNA 3 188 -1 1828 113 28 7 chr5 31440439 31440472 -168189678 - AluSg SINE Alu -20 290 259 207 0 0 0 chr5 31440472 31440495 -168189655 + (GGCTG)n Simple_repeat Simple_repeat 5 27 0 1828 113 28 7 chr5 31440495 31440745 -168189405 - AluSg SINE Alu -51 259 1 2268 102 3 0 chr5 31441107 31441411 -168188739 - AluSq SINE Alu -8 305 1 1664 128 17 31 chr5 31441817 31442106 -168188044 - AluSx SINE Alu -10 302 18 2082 113 0 0 chr5 31442542 31442873 -168187277 + AluSx SINE Alu 1 331 0 389 221 11 11 chr5 31443332 31443427 -168186723 - MLT1L LTR MaLR -18 597 503 475 234 40 0 chr5 31444181 31444305 -168185845 + HAL1 LINE L1 109 237 -2270 387 268 118 7 chr5 31444447 31444600 -168185550 + HAL1 LINE L1 480 649 -1858 189 284 14 27 chr5 31444689 31444763 -168185387 + MER5B DNA MER1_type 1 73 -105 264 239 0 70 chr5 31444778 31444849 -168185301 - L2 LINE L2 0 3313 3248 1065 213 71 58 chr5 31444911 31445306 -168184844 + HAL1 LINE L1 791 1190 -1317 1029 232 29 8 chr5 31445306 31445547 -168184603 - LTR8 LTR ERV1 0 691 446 1307 167 27 68 chr5 31446174 31446287 -168183863 + AluJb SINE Alu 1 117 -199 2501 113 16 11 chr5 31446287 31446658 -168183492 + THE1C LTR MaLR 1 373 -2 1307 167 27 68 chr5 31446658 31446872 -168183278 + AluJb SINE Alu 117 316 0 504 32 0 0 chr5 31447006 31447068 -168183082 + (TA)n Simple_repeat Simple_repeat 1 62 0 243 61 0 0 chr5 31447819 31447852 -168182298 + (CA)n Simple_repeat Simple_repeat 2 34 0 534 255 32 83 chr5 31447899 31448003 -168182147 + MIR SINE MIR 56 164 -98 2108 106 3 0 chr5 31448003 31448296 -168181854 + AluSc SINE Alu 1 294 -15 2263 99 0 0 chr5 31448301 31448595 -168181555 + AluSg SINE Alu 1 294 -16 534 255 32 83 chr5 31448595 31448700 -168181450 + MIR SINE MIR 168 260 -2 286 280 56 17 chr5 31448896 31449039 -168181111 - MIR SINE MIR -61 201 16 189 234 0 43 chr5 31449164 31449211 -168180939 + MIR3 SINE MIR 12 56 -152 2149 100 10 3 chr5 31449482 31449791 -168180359 - AluSq SINE Alu -2 311 1 1999 121 7 7 chr5 31449872 31450177 -168179973 - AluSx SINE Alu -7 305 1 351 208 104 10 chr5 31451172 31451268 -168178882 - MER53 DNA DNA -80 109 5 285 202 139 116 chr5 31451683 31451812 -168178338 - MER20 DNA MER1_type -87 132 1 202 393 0 11 chr5 31451888 31451977 -168178173 - MIR SINE MIR -85 123 36 575 247 68 36 chr5 31452231 31452482 -168177668 + MIR SINE MIR 1 259 -3 2272 78 0 3 chr5 31452751 31453045 -168177105 - AluSx SINE Alu -19 293 1 186 339 0 0 chr5 31453129 31453185 -168176965 - L2 LINE L2 0 3272 3217 2266 80 13 0 chr5 31455077 31455376 -168174774 + AluSx SINE Alu 1 303 -9 2294 66 0 0 chr5 31455378 31455665 -168174485 + AluY SINE Alu 1 287 -24 810 288 83 17 chr5 31455839 31456079 -168174071 + MIR SINE MIR 7 262 0 320 263 20 72 chr5 31456142 31456172 -168173978 - L1MC4 LINE L1 -1320 6722 6692 2029 108 0 0 chr5 31456172 31456449 -168173701 + AluSx SINE Alu 1 277 -35 180 0 0 0 chr5 31456450 31456470 -168173680 + (TC)n Simple_repeat Simple_repeat 1 20 0 1101 126 0 0 chr5 31456470 31456645 -168173505 + (TA)n Simple_repeat Simple_repeat 2 176 0 320 263 20 72 chr5 31456645 31456763 -168173387 - L1MC4 LINE L1 -1348 6694 6615 * 408 253 23 0 chr5 31456687 31456774 -168173376 + L1MC4 LINE L1 6615 6703 -1339 349 258 77 0 chr5 31456776 31456884 -168173266 + L1MC4 LINE L1 6571 6652 -1133 916 295 26 49 chr5 31457147 31457242 -168172908 - L3b LINE CR1 -138 1445 1349 2197 102 0 0 chr5 31457242 31457546 -168172604 - AluY SINE Alu -7 304 1 916 295 26 49 chr5 31457546 31457799 -168172351 - L3b LINE CR1 -234 1349 1105 2039 123 0 0 chr5 31458469 31458762 -168171388 - AluSg SINE Alu -14 296 4 1947 132 0 16 chr5 31458879 31459189 -168170961 - AluSx SINE Alu 0 312 8 2154 111 0 0 chr5 31459209 31459507 -168170643 - AluSx SINE Alu -14 298 1 252 0 0 0 chr5 31463519 31463547 -168166603 + (TA)n Simple_repeat Simple_repeat 1 28 0 393 162 0 140 chr5 31463549 31463626 -168166524 - HAL1 LINE L1 -33 2474 2422 763 178 0 22 chr5 31463626 31463761 -168166389 - FLAM_C SINE Alu -1 132 1 393 162 0 140 chr5 31463761 31463819 -168166331 - HAL1 LINE L1 -85 2422 2358 755 294 68 4 chr5 31463851 31464099 -168166051 - HAL1 LINE L1 -604 1903 1640 878 245 68 45 chr5 31464100 31464410 -168165740 - HAL1 LINE L1 -900 1607 1291 2037 125 10 0 chr5 31464432 31464736 -168165414 - AluSx SINE Alu -5 307 1 1039 83 0 0 chr5 31464740 31464873 -168165277 - AluSq/x SINE Alu -179 133 1 1148 220 62 70 chr5 31464905 31464977 -168165173 - HAL1 LINE L1 -1253 1254 1183 2286 141 155 124 chr5 31464977 31465342 -168164808 + LTR8A LTR ERV1 3 355 -372 1878 131 14 0 chr5 31465342 31465625 -168164525 - AluSx SINE Alu -25 287 1 2286 141 155 124 chr5 31465625 31465962 -168164188 + LTR8A LTR ERV1 355 727 0 1148 220 62 70 chr5 31465962 31466357 -168163793 - HAL1 LINE L1 -1324 1183 791 264 239 0 70 chr5 31466419 31466490 -168163660 + L2 LINE L2 3248 3313 0 190 246 16 33 chr5 31466505 31466566 -168163584 - MER5B DNA MER1_type -105 73 14 235 231 92 110 chr5 31466684 31466857 -168163293 - HAL1 LINE L1 -1858 649 480 1999 117 3 32 chr5 31467151 31467325 -168162825 - AluSx SINE Alu -5 307 144 1914 104 3 60 chr5 31467325 31467641 -168162509 - AluSg SINE Alu -12 298 1 1999 117 3 32 chr5 31467641 31467782 -168162368 - AluSx SINE Alu -168 144 1 1235 220 124 41 chr5 31468588 31469025 -168161125 + LTR33 LTR ERVL 47 519 -2 2050 107 21 0 chr5 31469121 31469411 -168160739 - AluSq SINE Alu -17 296 1 2472 52 3 0 chr5 31469437 31469744 -168160406 - AluY SINE Alu -3 308 1 1678 161 3 10 chr5 31469897 31470196 -168159954 - AluJo SINE Alu -2 310 14 2379 65 7 0 chr5 31470219 31470528 -168159622 - AluY SINE Alu 0 311 1 1573 192 16 0 chr5 31470589 31470896 -168159254 - AluJb SINE Alu 0 312 1 214 273 36 0 chr5 31471396 31471451 -168158699 - L2 LINE L2 -1 3271 3215 274 335 99 7 chr5 31471496 31471648 -168158502 - MIR3 SINE MIR -6 202 37 213 154 0 0 chr5 31472482 31472521 -168157629 + (CGGGG)n Simple_repeat Simple_repeat 1 39 0 218 217 0 0 chr5 31472531 31472577 -168157573 - L2 LINE L2 -17 3255 3210 2140 97 0 7 chr5 31472761 31473059 -168157091 + AluSg SINE Alu 1 296 -14 278 330 18 9 chr5 31473069 31473181 -168156969 + MIR SINE MIR 81 193 -69 1979 133 0 3 chr5 31473370 31473670 -168156480 - AluSx SINE Alu -13 299 1 1438 53 5 5 chr5 31474002 31474191 -168155959 + AluY SINE Alu 123 311 0 2266 87 0 3 chr5 31475203 31475503 -168154647 + AluSx SINE Alu 1 299 -13 2079 93 17 0 chr5 31476056 31476346 -168153804 - AluSx SINE Alu -17 295 1 867 198 0 16 chr5 31476408 31476590 -168153560 - AluJ SINE Alu 0 312 134 252 0 0 0 chr5 31476740 31476768 -168153382 + (TG)n Simple_repeat Simple_repeat 2 29 0 337 191 0 0 chr5 31477297 31477365 -168152785 - MLT2B1 LTR ERVL -2 518 451 454 225 0 0 chr5 31477394 31477474 -168152676 + Tigger3(Golem) DNA MER2_type 1 80 -2949 579 188 20 0 chr5 31477592 31477693 -168152457 + Tigger3(Golem) DNA MER2_type 2935 3037 0 207 162 0 0 chr5 31477695 31477732 -168152418 + (TA)n Simple_repeat Simple_repeat 1 37 0 1675 148 4 14 chr5 31477776 31478054 -168152096 + AluJo SINE Alu 28 302 -10 344 217 0 0 chr5 31478064 31478124 -168152026 - MLT2D LTR ERVL -74 340 281 432 0 0 0 chr5 31478131 31478179 -168151971 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 832 126 0 16 chr5 31478179 31478299 -168151851 - AluJ SINE Alu -191 121 2 1653 156 48 54 chr5 31478301 31478338 -168151812 - MLT2C2 LTR ERVL -132 332 296 1967 115 18 0 chr5 31478338 31478624 -168151526 - AluSp SINE Alu -20 293 3 1653 156 48 54 chr5 31478624 31478920 -168151230 - MLT2C2 LTR ERVL -168 296 1 2099 138 0 0 chr5 31479077 31479382 -168150768 + AluSx SINE Alu 1 305 -7 2021 125 3 7 chr5 31479900 31480197 -168149953 + AluSx SINE Alu 1 296 -16 287 226 48 0 chr5 31480197 31480321 -168149829 + (TA)n Simple_repeat Simple_repeat 1 130 0 531 323 89 10 chr5 31480389 31480885 -168149265 - L1M4 LINE L1 -1305 4841 4307 1981 139 10 0 chr5 31480886 31481189 -168148961 - AluSx SINE Alu -6 306 1 458 177 194 38 chr5 31481513 31481699 -168148451 + MIR SINE MIR 48 262 0 1538 196 0 11 chr5 31481800 31482116 -168148034 - AluJb SINE Alu 0 313 1 2027 110 4 0 chr5 31482274 31482584 -168147566 - AluSq SINE Alu 0 313 3 2473 30 7 7 chr5 31483153 31483458 -168146692 - AluY SINE Alu -6 305 1 2406 66 0 0 chr5 31483702 31484006 -168146144 + AluY SINE Alu 1 304 -7 2074 90 6 35 chr5 31484508 31484819 -168145331 - AluSq SINE Alu -11 302 1 2352 80 0 3 chr5 31485385 31485696 -168144454 - AluSg SINE Alu 0 310 1 387 0 0 0 chr5 31485923 31485966 -168144184 + (TG)n Simple_repeat Simple_repeat 2 44 0 1963 109 7 30 chr5 31485971 31486273 -168143877 - AluSq SINE Alu -16 297 3 214 164 16 16 chr5 31486273 31486322 -168143828 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2019 105 3 14 chr5 31486322 31486616 -168143534 - AluSx SINE Alu -21 291 1 241 339 41 47 chr5 31486741 31486912 -168143238 - MIR SINE MIR -32 230 61 383 304 24 30 chr5 31487294 31487344 -168142806 - L2 LINE L2 -6 3307 3258 1914 133 20 3 chr5 31487344 31487646 -168142504 + AluSx SINE Alu 1 307 -5 383 304 24 30 chr5 31487646 31487763 -168142387 - L2 LINE L2 -55 3258 3141 2102 128 0 0 chr5 31487814 31488118 -168142032 - AluSx SINE Alu -8 304 1 1610 157 64 0 chr5 31488217 31488498 -168141652 - AluSx SINE Alu -13 299 1 2034 115 0 0 chr5 31488528 31488815 -168141335 + AluSx SINE Alu 1 287 -25 309 51 0 0 chr5 31488821 31488860 -168141290 + (CATA)n Simple_repeat Simple_repeat 1 39 0 203 262 0 0 chr5 31488957 31488999 -168141151 + MIR3 SINE MIR 119 160 -48 1254 142 5 0 chr5 31489190 31489387 -168140763 - AluSg/x SINE Alu -16 296 99 1022 157 0 0 chr5 31489387 31489540 -168140610 - AluSq SINE Alu -160 153 1 219 69 0 0 chr5 31489756 31489785 -168140365 + (A)n Simple_repeat Simple_repeat 1 29 0 440 295 166 0 chr5 31489987 31490228 -168139922 + L1MC4a LINE L1 5585 5865 -1943 1867 108 56 0 chr5 31490510 31490796 -168139354 - AluSq SINE Alu -11 302 1 2187 88 0 7 chr5 31491302 31491598 -168138552 - AluY SINE Alu -17 294 1 222 91 0 0 chr5 31491834 31491867 -168138283 + (CA)n Simple_repeat Simple_repeat 2 34 0 308 200 0 15 chr5 31492743 31492808 -168137342 - L1MDa LINE L1 -4036 2504 2441 1955 96 7 4 chr5 31492820 31493091 -168137059 - AluSx SINE Alu -40 272 1 1911 117 0 29 chr5 31494336 31494643 -168135507 + AluSx SINE Alu 1 298 -14 592 225 174 0 chr5 31494784 31494962 -168135188 + MER3 DNA MER1_type 1 209 0 1323 98 0 16 chr5 31495727 31495903 -168134247 - AluSg/x SINE Alu -3 309 135 2126 116 6 0 chr5 31495903 31496214 -168133936 - AluSp SINE Alu 0 313 1 1323 98 0 16 chr5 31496214 31496230 -168133920 - AluSg/x SINE Alu -177 135 120 1684 151 10 24 chr5 31496511 31496809 -168133341 - AluJo SINE Alu -18 294 1 401 266 35 0 chr5 31496983 31497096 -168133054 + MER94 DNA DNA 2 118 -16 1581 161 0 11 chr5 31497191 31497470 -168132680 - AluJb SINE Alu -36 276 1 191 340 0 0 chr5 31497481 31497528 -168132622 - L2 LINE L2 -102 3170 3124 1926 141 7 3 chr5 31497888 31498194 -168131956 + AluJb SINE Alu 1 307 -5 1906 106 0 60 chr5 31498478 31498812 -168131338 - AluSq SINE Alu 0 316 1 220 67 0 67 chr5 31499476 31499508 -168130642 + (TTCCC)n Simple_repeat Simple_repeat 3 33 -11 1958 108 0 4 chr5 31499508 31499787 -168130363 - AluSg SINE Alu -32 278 1 220 67 0 67 chr5 31499787 31499799 -168130351 + (TTCCC)n Simple_repeat Simple_repeat 33 44 0 1697 202 45 8 chr5 31499809 31500161 -168129989 + MLT1A1 LTR MaLR 1 365 0 309 249 117 61 chr5 31500512 31500709 -168129441 - MIR SINE MIR -14 248 41 492 18 0 0 chr5 31500923 31500980 -168129170 + (TG)n Simple_repeat Simple_repeat 1 57 0 327 246 0 0 chr5 31501087 31501156 -168128994 - L2 LINE L2 0 3272 3204 1559 168 36 11 chr5 31501275 31501555 -168128595 + AluJb SINE Alu 1 287 -25 1883 125 0 14 chr5 31502343 31502640 -168127510 - AluSx SINE Alu -19 293 1 2292 71 10 3 chr5 31503417 31503726 -168126424 - AluY SINE Alu 0 311 1 1913 128 0 20 chr5 31503728 31504032 -168126118 - AluSx SINE Alu -14 298 1 375 290 95 38 chr5 31504139 31504234 -168125916 + MIR SINE MIR 31 119 -143 1845 153 62 37 chr5 31504234 31504587 -168125563 + MLT1A1 LTR MaLR 1 362 -3 375 290 95 38 chr5 31504587 31504699 -168125451 + MIR SINE MIR 119 250 -12 2177 112 7 0 chr5 31505735 31506040 -168124110 + AluSx SINE Alu 1 307 -5 4100 166 62 22 chr5 31506192 31507066 -168123084 - L1MB7 LINE L1 0 6184 5276 1228 128 5 0 chr5 31507078 31507265 -168122885 - AluSg/x SINE Alu -8 304 117 1433 84 14 33 chr5 31507267 31507480 -168122670 + AluSg/x SINE Alu 91 299 -13 257 222 0 0 chr5 31507500 31507554 -168122596 - L1MB7 LINE L1 -1194 4952 4899 335 258 0 34 chr5 31507554 31507643 -168122507 + L1M4 LINE L1 5215 5300 -846 1834 107 7 18 chr5 31507646 31507927 -168122223 + AluSx SINE Alu 35 312 0 1744 164 13 10 chr5 31507964 31508275 -168121875 + AluJo SINE Alu 1 312 0 2089 114 0 25 chr5 31508319 31508636 -168121514 - AluSq SINE Alu -4 309 1 21 36 0 0 chr5 31508638 31508666 -168121484 + AT_rich Low_complexity Low_complexity 1 28 0 264 174 0 0 chr5 31508904 31508950 -168121200 - L2 LINE L2 -2 3270 3225 1452 73 0 5 chr5 31509130 31509322 -168120828 - AluY SINE Alu -10 301 111 233 167 0 100 chr5 31509322 31509382 -168120768 - AluSp SINE Alu -140 163 110 2025 98 0 47 chr5 31509571 31509888 -168120262 - AluSx SINE Alu -10 302 1 1179 120 0 0 chr5 31510615 31510790 -168119360 - AluY SINE Alu -1 310 136 352 193 217 12 chr5 31510871 31510981 -168119169 - AluJ SINE Alu 0 308 182 827 158 0 0 chr5 31510981 31511114 -168119036 - AluJ SINE Alu -179 133 1 2071 123 0 0 chr5 31511165 31511467 -168118683 + AluSx SINE Alu 1 302 -10 1385 191 113 29 chr5 31511746 31512091 -168118059 - MLT1A2 LTR MaLR 0 374 1 2315 97 0 0 chr5 31512408 31512718 -168117432 + AluSg SINE Alu 1 310 0 1907 116 20 7 chr5 31513368 31513660 -168116490 + AluSx SINE Alu 1 296 -16 747 230 53 79 chr5 31514590 31514823 -168115327 - MIR SINE MIR -3 259 32 1924 120 0 47 chr5 31514823 31515000 -168115150 - AluSx SINE Alu -10 302 145 1888 128 54 7 chr5 31515000 31515296 -168114854 - AluSg SINE Alu 0 310 1 1924 120 0 47 chr5 31515296 31515435 -168114715 - AluSx SINE Alu -167 145 1 747 230 53 79 chr5 31515435 31515466 -168114684 - MIR SINE MIR -230 32 2 26 0 0 0 chr5 31515514 31515540 -168114610 + AT_rich Low_complexity Low_complexity 1 26 0 356 303 91 18 chr5 31515830 31515995 -168114155 - MIR SINE MIR -36 226 50 589 303 20 20 chr5 31516176 31516374 -168113776 - LTR67 LTR ERVL -9 548 351 225 94 0 0 chr5 31516639 31516671 -168113479 + (CCCCAG)n Simple_repeat Simple_repeat 1 32 0 1833 182 16 0 chr5 31516700 31517007 -168113143 - MLT1A1 LTR MaLR 0 365 54 239 208 21 0 chr5 31517006 31517054 -168113096 + MLT1B LTR MaLR 8 56 -334 * 261 86 0 0 chr5 31517067 31517102 -168113048 - MLT1A1 LTR MaLR -330 35 1 325 77 0 19 chr5 31517528 31517580 -168112570 + Alu SINE Alu 250 300 0 788 98 0 0 chr5 31517588 31517690 -168112460 + MSTA LTR MaLR 327 428 0 1613 139 75 0 chr5 31517783 31518050 -168112100 - AluJb SINE Alu -21 291 5 1556 74 5 0 chr5 31519792 31519994 -168110156 - AluSx SINE Alu -109 203 1 280 67 0 22 chr5 31520006 31520051 -168110099 - L1MC1 LINE L1 -9 6324 6281 180 111 0 0 chr5 31520052 31520079 -168110071 + (A)n Simple_repeat Simple_repeat 1 27 0 1198 188 28 53 chr5 31520079 31520361 -168109789 + AluJo SINE Alu 1 275 -37 1284 194 21 0 chr5 31520391 31520661 -168109489 + AluJo SINE Alu 38 312 0 996 158 22 33 chr5 31520668 31520851 -168109299 - L1MC1 LINE L1 -50 6283 6103 579 209 32 70 chr5 31520872 31521030 -168109120 + AluJb SINE Alu 3 154 -158 2291 142 48 5 chr5 31521043 31521440 -168108710 - L1MC1 LINE L1 -244 6089 5677 1789 151 0 20 chr5 31521747 31522045 -168108105 + AluJb SINE Alu 1 292 -20 894 176 12 57 chr5 31523014 31523258 -168106892 - AluSg/x SINE Alu -9 301 69 2177 112 7 0 chr5 31524508 31524813 -168105337 + AluSx SINE Alu 1 307 -5 4077 166 63 22 chr5 31524965 31525838 -168104312 - L1MB7 LINE L1 0 6184 5276 1778 123 17 17 chr5 31525850 31526143 -168104007 - AluSx SINE Alu -8 304 12 22 0 0 0 chr5 31527259 31527281 -168102869 + AT_rich Low_complexity Low_complexity 1 22 0 5137 165 18 24 chr5 31528683 31529475 -168100675 + L1PA16 LINE L1 4681 5476 -690 1462 166 10 28 chr5 31529475 31529765 -168100385 + AluJo SINE Alu 12 296 -16 2101 102 10 0 chr5 31529775 31530079 -168100071 + AluSq SINE Alu 1 307 -6 5137 165 18 24 chr5 31530079 31530765 -168099385 + L1PA16 LINE L1 5485 6163 -3 2009 108 3 14 chr5 31530897 31531217 -168098933 - AluSx SINE Alu 0 312 1 339 106 0 0 chr5 31531824 31531871 -168098279 - AluS SINE Alu -226 77 31 2069 97 14 0 chr5 31532014 31532293 -168097857 - AluSx SINE Alu -18 294 12 855 202 16 27 chr5 31532881 31533064 -168097086 - MER20 DNA MER1_type -38 181 1 1321 102 0 11 chr5 31533105 31533292 -168096858 + AluSq SINE Alu 1 185 -128 2162 167 30 40 chr5 31533345 31533734 -168096416 + MSTB LTR MaLR 1 387 -39 2286 40 43 17 chr5 31533734 31534036 -168096114 - AluY SINE Alu -1 310 1 2162 167 30 40 chr5 31534036 31534076 -168096074 + MSTB LTR MaLR 387 426 0 555 134 0 0 chr5 31534327 31534409 -168095741 + AluS SINE Alu 3 84 -228 1900 151 0 0 chr5 31534568 31534860 -168095290 - AluSx SINE Alu -20 292 1 1005 111 0 0 chr5 31534860 31534995 -168095155 - AluSq/x SINE Alu -177 135 1 2155 89 0 0 chr5 31535804 31536119 -168094031 + AluSx SINE Alu 3 317 0 2800 152 15 41 chr5 31536139 31536440 -168093710 - L1MB3 LINE L1 -19 6164 5882 2297 88 0 3 chr5 31536440 31536746 -168093404 - AluSq SINE Alu -8 305 1 2800 152 15 41 chr5 31536746 31536982 -168093168 - L1MB3 LINE L1 -301 5882 5641 415 333 7 20 chr5 31537185 31537332 -168092818 + MIR3 SINE MIR 37 181 -27 24 0 0 0 chr5 31538137 31538161 -168091989 + AT_rich Low_complexity Low_complexity 1 24 0 2036 128 0 3 chr5 31538339 31538644 -168091506 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr5 31539953 31539974 -168090176 + AT_rich Low_complexity Low_complexity 1 21 0 507 217 154 21 chr5 31541421 31541564 -168088586 + MER58C DNA MER1_type 7 168 -47 816 154 0 0 chr5 31541627 31541744 -168088406 - AluSq/x SINE Alu -194 118 2 189 0 0 0 chr5 31545922 31545943 -168084207 + (TG)n Simple_repeat Simple_repeat 2 22 0 775 217 6 25 chr5 31546015 31546172 -168083978 - FRAM SINE Alu -12 154 1 2260 84 0 0 chr5 31546459 31546755 -168083395 + AluSx SINE Alu 1 296 -16 1335 209 148 25 chr5 31547338 31547769 -168082381 + Charlie4a DNA MER1_type 8 491 -17 278 130 0 22 chr5 31547921 31547967 -168082183 - MER5A DNA MER1_type -93 96 52 579 185 8 15 chr5 31549528 31549658 -168080492 - AluSx SINE Alu 0 310 182 1294 135 5 0 chr5 31549851 31550043 -168080107 - AluSx SINE Alu -119 193 1 218 271 163 47 chr5 31550102 31550231 -168079919 - MER5A DNA MER1_type -3 186 43 1436 186 9 47 chr5 31550422 31550744 -168079406 - AluJo SINE Alu -2 310 1 228 189 0 0 chr5 31550811 31550848 -168079302 - MIR SINE MIR -61 147 111 240 330 9 47 chr5 31551181 31551287 -168078863 + MIR SINE MIR 90 191 -71 1241 197 68 4 chr5 31551293 31551557 -168078593 + AluSx SINE Alu 1 281 -31 185 178 22 0 chr5 31551594 31551639 -168078511 + GA-rich Low_complexity Low_complexity 1 46 0 2219 101 3 0 chr5 31552558 31552865 -168077285 + AluSx SINE Alu 1 308 -4 388 153 0 14 chr5 31553116 31553188 -168076962 - LTR67 LTR ERVL -27 530 460 185 252 68 121 chr5 31553196 31553402 -168076748 - L3 LINE CR1 -221 1356 1162 1285 87 0 157 chr5 31553410 31553754 -168076396 - AluSg SINE Alu -11 299 10 293 273 16 66 chr5 31553795 31553916 -168076234 - L3 LINE CR1 -494 1083 969 1281 167 86 0 chr5 31554412 31554650 -168075500 - L1ME1 LINE L1 -6 6158 5966 1998 164 14 25 chr5 31554650 31554859 -168075291 - MLT1A1 LTR MaLR -2 363 158 1500 210 0 3 chr5 31554859 31555168 -168074982 - AluJb SINE Alu -4 308 1 1998 164 14 25 chr5 31555168 31555325 -168074825 - MLT1A1 LTR MaLR -207 158 1 1281 167 86 0 chr5 31555325 31555474 -168074676 - L1ME1 LINE L1 -198 5966 5759 2217 88 3 0 chr5 31556709 31557003 -168073147 - AluSg1 SINE Alu -14 295 1 1913 106 10 45 chr5 31557894 31558205 -168071945 - AluSg SINE Alu -10 300 1 369 264 78 23 chr5 31558210 31558339 -168071811 - L3 LINE CR1 -473 1104 969 1281 167 86 0 chr5 31558835 31559073 -168071077 - L1ME1 LINE L1 -6 6158 5966 1984 164 14 22 chr5 31559073 31559282 -168070868 - MLT1A1 LTR MaLR -2 363 157 1500 210 0 3 chr5 31559282 31559591 -168070559 - AluJb SINE Alu -4 308 1 1984 164 14 22 chr5 31559591 31559747 -168070403 - MLT1A1 LTR MaLR -208 157 1 1281 167 86 0 chr5 31559747 31559896 -168070254 - L1ME1 LINE L1 -198 5966 5759 2134 107 7 7 chr5 31561001 31561309 -168068841 + AluSx SINE Alu 3 310 -2 226 281 144 46 chr5 31561310 31561637 -168068513 + L1 LINE L1 4699 5057 -1089 1455 171 0 73 chr5 31561754 31561882 -168068268 + AluJo SINE Alu 1 137 -175 2081 87 24 0 chr5 31561882 31562169 -168067981 - AluSc SINE Alu -15 294 1 1455 171 0 73 chr5 31562169 31562356 -168067794 + AluJo SINE Alu 137 293 -19 2109 83 0 33 chr5 31562868 31563169 -168066981 + AluSg SINE Alu 1 291 -19 184 42 0 0 chr5 31563513 31563537 -168066613 + (TTTTG)n Simple_repeat Simple_repeat 2 130 0 1788 103 0 56 chr5 31563537 31563839 -168066311 - AluSx SINE Alu -27 285 1 2368 213 59 21 chr5 31563840 31564540 -168065610 - L1 LINE L1 -2965 3181 2456 325 182 223 50 chr5 31564540 31564661 -168065489 + L1 LINE L1 3167 3308 -2838 732 56 0 0 chr5 31564661 31564751 -168065399 + AluY SINE Alu 160 249 -62 1425 127 4 4 chr5 31564751 31564785 -168065365 + AluSg/x SINE Alu 83 116 -194 226 43 0 65 chr5 31564785 31564831 -168065319 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1425 127 4 4 chr5 31564831 31565024 -168065126 + AluSg/x SINE Alu 115 310 0 589 152 0 10 chr5 31565140 31565239 -168064911 - FRAM SINE Alu -8 168 71 462 209 22 0 chr5 31565365 31565456 -168064694 - FRAM SINE Alu -84 92 1 2168 109 3 3 chr5 31566495 31566807 -168063343 - AluSq SINE Alu -1 312 1 1499 167 0 25 chr5 31566894 31567170 -168062980 - AluJo SINE Alu -33 279 11 1908 105 0 14 chr5 31567201 31567486 -168062664 - AluSg SINE Alu -28 282 2 43 20 0 0 chr5 31567493 31567543 -168062607 + AT_rich Low_complexity Low_complexity 1 50 0 1909 133 31 0 chr5 31567618 31567904 -168062246 - AluSx SINE Alu -17 295 1 1654 211 72 34 chr5 31567963 31568408 -168061742 - MLT1C LTR MaLR 0 467 6 208 93 70 0 chr5 31568421 31568464 -168061686 + CT-rich Low_complexity Low_complexity 4 49 0 1742 114 54 20 chr5 31568466 31568763 -168061387 - AluSp SINE Alu -6 307 1 27 92 0 0 chr5 31569050 31569126 -168061024 + AT_rich Low_complexity Low_complexity 1 76 0 253 270 40 27 chr5 31569166 31569240 -168060910 + L2 LINE L2 3153 3227 -45 1573 156 4 14 chr5 31569523 31569799 -168060351 + AluJb SINE Alu 21 293 -19 1529 143 99 0 chr5 31569893 31570165 -168059985 - AluSg SINE Alu -6 304 6 262 88 70 88 chr5 31572938 31572964 -168057186 + MADE1 DNA Mariner 1 26 -54 2400 50 0 22 chr5 31572964 31573281 -168056869 - AluY SINE Alu -1 310 1 262 88 70 88 chr5 31573281 31573311 -168056839 + MADE1 DNA Mariner 26 56 -24 3580 112 70 16 chr5 31573317 31573872 -168056278 - LTR9B LTR ERV1 0 644 60 1947 112 7 17 chr5 31573872 31574168 -168055982 + AluSp SINE Alu 1 293 -20 523 263 86 38 chr5 31574351 31574560 -168055590 + MIR SINE MIR 35 253 -9 788 219 0 0 chr5 31576260 31576415 -168053735 + MLT1A1 LTR MaLR 1 155 -210 1622 104 0 0 chr5 31576415 31576637 -168053513 + AluSg/x SINE Alu 76 297 -15 1435 124 18 5 chr5 31576637 31576855 -168053295 + AluSp SINE Alu 2 222 -91 1594 184 0 4 chr5 31577102 31577380 -168052770 - AluJb SINE Alu -35 277 1 549 234 94 16 chr5 31577461 31577589 -168052561 + L2 LINE L2 3133 3270 -2 1783 133 12 62 chr5 31578706 31578937 -168051213 + AluJo SINE Alu 1 214 -98 1890 135 0 0 chr5 31578937 31579247 -168050903 - AluSx SINE Alu 0 310 1 1783 133 12 62 chr5 31579247 31579338 -168050812 + AluJo SINE Alu 214 308 -4 561 256 38 25 chr5 31579510 31579670 -168050480 - LTR40b LTR ERVL -34 428 267 808 178 41 0 chr5 31579748 31579894 -168050256 + AluJb SINE Alu 147 298 -14 1644 88 0 25 chr5 31580244 31580482 -168049668 - THE1B LTR MaLR -132 232 1 1241 157 42 0 chr5 31580779 31580996 -168049154 - AluJo SINE Alu -2 310 85 1930 101 6 35 chr5 31581694 31582011 -168048139 - AluSg SINE Alu -2 308 1 719 178 0 30 chr5 31582018 31582153 -168047997 - FLAM_C SINE Alu -2 131 1 1978 120 0 3 chr5 31582686 31582969 -168047181 + AluSx SINE Alu 1 282 -30 2194 92 14 0 chr5 31583433 31583727 -168046423 + AluY SINE Alu 1 298 -13 2039 107 0 32 chr5 31584283 31584593 -168045557 + AluSx SINE Alu 1 300 -12 323 277 89 27 chr5 31584721 31584793 -168045357 - MIR3 SINE MIR -42 166 88 355 306 105 0 chr5 31584793 31584917 -168045233 + MIR SINE MIR 3 139 -123 2043 132 83 8 chr5 31585052 31585438 -168044712 - L1MB7 LINE L1 -22 6162 5748 1950 113 0 11 chr5 31585796 31586102 -168044048 - AluSx SINE Alu 0 303 1 543 297 139 32 chr5 31587005 31587320 -168042830 - L3 LINE CR1 -291 1286 911 1853 152 7 0 chr5 31587320 31587622 -168042528 - AluJb SINE Alu -8 304 1 543 297 139 32 chr5 31587622 31587737 -168042413 - L3 LINE CR1 -666 911 810 1120 167 155 4 chr5 31589673 31589912 -168040238 + AluJb SINE Alu 23 297 -15 1466 188 14 3 chr5 31590482 31590775 -168039375 + AluSx SINE Alu 1 296 -16 28 29 0 0 chr5 31590823 31590858 -168039292 + AT_rich Low_complexity Low_complexity 1 35 0 2421 53 13 3 chr5 31590866 31591168 -168038982 + AluSp SINE Alu 1 305 -8 292 314 99 70 chr5 31592615 31592838 -168037312 + L2 LINE L2 2217 2432 -882 453 206 88 0 chr5 31592838 31592940 -168037210 - MER81 DNA DNA -2 112 2 292 314 99 70 chr5 31592940 31593190 -168036960 + L2 LINE L2 2432 2704 -610 234 263 18 0 chr5 31593204 31593261 -168036889 + (CA)n Simple_repeat Simple_repeat 2 59 0 182 339 0 0 chr5 31593333 31593395 -168036755 + L2 LINE L2 2800 2861 -453 748 230 92 98 chr5 31593397 31593766 -168036384 - MER21B LTR ERV1 -363 500 134 238 333 62 19 chr5 31593815 31593977 -168036173 + L2 LINE L2 2897 3065 -207 2277 156 41 30 chr5 31594129 31594480 -168035670 - L1PB4 LINE L1 -9 6147 5789 2209 109 0 6 chr5 31594480 31594793 -168035357 - AluSx SINE Alu -1 311 1 2277 156 41 30 chr5 31594793 31594877 -168035273 - L1PB4 LINE L1 -367 5789 5707 400 235 65 26 chr5 31594963 31595116 -168035034 + MIR3 SINE MIR 33 191 -17 948 298 110 36 chr5 31595719 31596681 -168033469 - L2 LINE L2 0 3313 2282 2146 120 0 13 chr5 31596816 31597132 -168033018 + AluSx SINE Alu 1 312 0 181 269 97 60 chr5 31598142 31598276 -168031874 - L2 LINE L2 -219 3053 2915 1840 116 43 20 chr5 31599075 31599378 -168030772 - AluSx SINE Alu -2 310 1 1884 124 28 3 chr5 31599567 31599857 -168030293 - AluSx SINE Alu -15 297 1 351 272 175 34 chr5 31599920 31600126 -168030024 - MIR SINE MIR -7 255 21 1048 172 34 10 chr5 31600274 31600478 -168029672 - MER3 DNA MER1_type 0 209 1 226 118 0 59 chr5 31600801 31600852 -168029298 + (TCTCCC)n Simple_repeat Simple_repeat 2 49 0 1442 111 69 5 chr5 31601922 31602138 -168028012 - MER30 DNA MER1_type 0 230 1 201 179 26 0 chr5 31602266 31602305 -168027845 + CT-rich Low_complexity Low_complexity 2 41 0 1849 117 0 0 chr5 31602667 31602924 -168027226 + AluSg SINE Alu 39 295 -15 361 305 67 12 chr5 31603431 31603595 -168026555 - L3 LINE CR1 -341 1236 1064 1628 149 0 71 chr5 31603871 31604040 -168026110 - AluJb SINE Alu -13 299 162 1518 166 18 7 chr5 31604040 31604324 -168025826 - AluSx SINE Alu -6 306 20 1628 149 0 71 chr5 31604324 31604476 -168025674 - AluJb SINE Alu -150 162 1 193 140 0 40 chr5 31604990 31605040 -168025110 + (GGGAGA)n Simple_repeat Simple_repeat 2 49 0 769 128 112 0 chr5 31605661 31605786 -168024364 + MER30 DNA MER1_type 92 230 0 1039 153 0 0 chr5 31606305 31606475 -168023675 + FRAM SINE Alu 1 169 -7 2227 109 3 0 chr5 31607437 31607749 -168022401 - AluSp SINE Alu 0 313 1 2140 161 0 12 chr5 31607780 31608121 -168022029 + MER1B DNA MER1_type 1 337 -2 292 70 42 28 chr5 31609613 31609684 -168020466 + (CA)n Simple_repeat Simple_repeat 1 72 0 2236 118 0 0 chr5 31609840 31610153 -168019997 - AluSq SINE Alu 0 313 1 1651 173 3 19 chr5 31610446 31610753 -168019397 + AluJb SINE Alu 1 302 -10 291 311 11 11 chr5 31610757 31610847 -168019303 - MIR SINE MIR -150 112 23 350 260 82 61 chr5 31611617 31611813 -168018337 - L1ME4a LINE L1 -6 6115 5916 530 281 45 49 chr5 31611838 31612006 -168018144 + MIR SINE MIR 30 198 -64 2255 88 3 0 chr5 31612006 31612303 -168017847 + AluSx SINE Alu 1 298 -14 530 281 45 49 chr5 31612303 31612358 -168017792 + MIR SINE MIR 198 252 -10 1265 177 6 82 chr5 31612499 31612815 -168017335 - AluJo SINE Alu -12 300 9 1482 145 0 0 chr5 31612828 31613055 -168017095 - AluSx SINE Alu -4 308 82 2441 52 0 10 chr5 31613055 31613364 -168016786 - AluY SINE Alu -4 307 1 544 194 0 0 chr5 31613365 31613458 -168016692 - AluSx SINE Alu -219 94 2 855 117 0 8 chr5 31614154 31614282 -168015868 + FLAM_C SINE Alu 1 127 -16 324 0 0 0 chr5 31614283 31614319 -168015831 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 2099 95 46 16 chr5 31614427 31614731 -168015419 - AluSq SINE Alu 0 313 1 2163 101 3 35 chr5 31615199 31615517 -168014633 + AluSg SINE Alu 3 310 0 1921 131 10 27 chr5 31615580 31615878 -168014272 + AluJo SINE Alu 1 293 -19 2261 99 26 0 chr5 31615944 31616246 -168013904 + AluSx SINE Alu 1 310 -2 2245 101 0 23 chr5 31616847 31617175 -168012975 + AluSx SINE Alu 1 321 0 1968 134 0 34 chr5 31617340 31617638 -168012512 + AluJb SINE Alu 1 288 -24 534 189 0 76 chr5 31617955 31618087 -168012063 + MER91B DNA MER1_type 2 123 -67 2204 109 0 13 chr5 31618518 31618821 -168011329 - AluSx SINE Alu -13 299 1 44 70 0 0 chr5 31618933 31619019 -168011131 + AT_rich Low_complexity Low_complexity 1 86 0 400 260 147 44 chr5 31619062 31619519 -168010631 - L1ME4a LINE L1 -3 6118 5615 1684 100 30 4 chr5 31620840 31621070 -168009080 - AluSc SINE Alu -2 307 72 2455 86 0 0 chr5 31621073 31621375 -168008775 - AluSx SINE Alu -10 302 1 1954 128 0 26 chr5 31621381 31621685 -168008465 - AluJo SINE Alu -16 296 1 221 250 12 12 chr5 31623030 31623110 -168007040 + L2 LINE L2 3170 3249 -64 2048 128 0 16 chr5 31623288 31623600 -168006550 + AluSx SINE Alu 1 307 -5 265 277 0 0 chr5 31624027 31624092 -168006058 - MIR3 SINE MIR -9 199 135 2114 116 3 7 chr5 31625273 31625565 -168004585 - AluJo SINE Alu -10 302 12 331 250 12 0 chr5 31625616 31625696 -168004454 + Charlie7 DNA MER1_type 1 81 -2531 207 100 0 0 chr5 31626163 31626193 -168003957 + (TA)n Simple_repeat Simple_repeat 2 31 0 564 109 0 43 chr5 31626193 31626285 -168003865 - AluSg SINE Alu -9 303 216 1150 105 0 20 chr5 31626285 31626438 -168003712 - AluSg SINE Alu -160 150 1 2391 92 7 3 chr5 31626775 31627078 -168003072 - AluSx SINE Alu -8 304 1 21 0 0 0 chr5 31627185 31627206 -168002944 + AT_rich Low_complexity Low_complexity 1 21 0 1945 97 9 103 chr5 31627388 31627727 -168002423 - AluSq SINE Alu -6 307 1 243 268 24 41 chr5 31627998 31628121 -168002029 - MER117 DNA MER1_type -31 166 46 2054 110 9 55 chr5 31628309 31628636 -168001514 - AluSx SINE Alu 0 312 1 184 330 66 57 chr5 31628934 31629161 -168000989 - L2 LINE L2 -530 2784 2556 3493 178 50 2 chr5 31629912 31630530 -167999620 + Tigger7 DNA MER2_type 3 650 -1837 2265 132 0 0 chr5 31630530 31630841 -167999309 + AluSx SINE Alu 1 311 -1 961 204 52 0 chr5 31630915 31631106 -167999044 - MER58A DNA MER1_type -23 201 1 191 114 29 0 chr5 31631260 31631295 -167998855 + GA-rich Low_complexity Low_complexity 4 39 0 2378 93 3 6 chr5 31631373 31631684 -167998466 + AluSp SINE Alu 1 310 -3 1117 205 19 0 chr5 31631689 31631899 -167998251 + MLT1A1 LTR MaLR 149 362 -3 479 65 0 0 chr5 31632004 31632066 -167998084 - Alu SINE Alu -255 63 2 24 53 0 0 chr5 31632239 31632277 -167997873 + AT_rich Low_complexity Low_complexity 1 38 0 267 269 0 15 chr5 31632544 31632611 -167997539 - MER94 DNA DNA -5 129 64 1767 170 3 3 chr5 31632627 31632909 -167997241 - AluJo SINE Alu -26 286 5 393 216 14 0 chr5 31632916 31632990 -167997160 - MER94 DNA DNA -59 75 1 305 27 68 27 chr5 31633295 31633368 -167996782 + (CA)n Simple_repeat Simple_repeat 2 77 0 598 42 90 12 chr5 31633380 31633547 -167996603 + (CA)n Simple_repeat Simple_repeat 1 180 0 2427 72 0 0 chr5 31634409 31634700 -167995450 + AluY SINE Alu 1 291 -20 1255 151 5 15 chr5 31634894 31635099 -167995051 + MER2 DNA MER2_type 1 203 -142 1094 44 15 0 chr5 31635110 31635247 -167994903 - SVA Other Other 0 1386 1248 365 278 56 31 chr5 31636329 31636491 -167993659 + MIR SINE MIR 30 195 -67 1876 103 4 11 chr5 31636497 31636758 -167993392 + AluSx SINE Alu 1 259 -53 1912 117 27 24 chr5 31637885 31638183 -167991967 - AluSc SINE Alu -10 299 1 22 35 0 0 chr5 31638253 31638282 -167991868 + AT_rich Low_complexity Low_complexity 1 29 0 224 261 14 14 chr5 31638489 31638563 -167991587 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr5 31638623 31638651 -167991499 + AT_rich Low_complexity Low_complexity 1 28 0 2140 127 0 3 chr5 31638693 31639000 -167991150 - AluSx SINE Alu -6 306 1 716 245 70 54 chr5 31639073 31639221 -167990929 + L1ME3A LINE L1 5139 5283 -881 2310 98 14 0 chr5 31639221 31639517 -167990633 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr5 31639521 31639543 -167990607 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 716 245 70 54 chr5 31639543 31639801 -167990349 + L1ME3A LINE L1 5285 5546 -618 593 239 62 0 chr5 31639924 31640054 -167990096 + MER58C DNA MER1_type 34 171 -44 1520 217 66 48 chr5 31640082 31640579 -167989571 + L1ME3A LINE L1 5650 6165 -2 285 200 17 0 chr5 31642005 31642065 -167988085 - MIR SINE MIR -118 144 84 2250 103 10 0 chr5 31642399 31642691 -167987459 - AluSx SINE Alu -17 295 1 1619 159 19 30 chr5 31643011 31643313 -167986837 + AluJo SINE Alu 14 312 0 793 194 133 0 chr5 31643328 31643508 -167986642 + MER3 DNA MER1_type 6 209 0 277 200 0 0 chr5 31643466 31643516 -167986634 - MER3 DNA MER1_type -120 89 40 * 2240 104 0 0 chr5 31644617 31644905 -167985245 - AluSx SINE Alu -23 289 2 186 43 0 0 chr5 31645245 31645268 -167984882 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 902 229 0 0 chr5 31645269 31645435 -167984715 - FRAM SINE Alu 0 166 1 404 171 0 0 chr5 31645906 31645982 -167984168 - MER116 DNA Mariner -4 76 1 338 253 30 10 chr5 31646478 31646577 -167983573 + MIR SINE MIR 113 213 -49 2207 134 0 10 chr5 31646773 31647087 -167983063 - AluJb SINE Alu -1 311 1 23 54 0 0 chr5 31647205 31647242 -167982908 + AT_rich Low_complexity Low_complexity 1 37 0 212 310 53 26 chr5 31647330 31647443 -167982707 - MIR SINE MIR -119 143 28 1796 159 18 0 chr5 31647682 31647959 -167982191 - AluJo SINE Alu -30 282 1 1999 133 0 33 chr5 31649269 31649570 -167980580 + AluSx SINE Alu 1 291 -21 23 0 0 0 chr5 31650822 31650845 -167979305 + AT_rich Low_complexity Low_complexity 1 23 0 2418 85 0 10 chr5 31650849 31651154 -167978996 + AluSq SINE Alu 1 302 -11 247 198 302 8 chr5 31653055 31653181 -167976969 + MIR SINE MIR 82 244 -18 201 330 64 18 chr5 31653847 31653956 -167976194 + MIR3 SINE MIR 77 190 -18 22 0 0 0 chr5 31654029 31654051 -167976099 + AT_rich Low_complexity Low_complexity 1 22 0 793 178 0 0 chr5 31654093 31654211 -167975939 + FLAM_C SINE Alu 1 118 -15 641 148 96 26 chr5 31654404 31654519 -167975631 - FLAM_C SINE Alu -16 127 5 2185 127 0 0 chr5 31654856 31655155 -167974995 - AluJb SINE Alu -13 299 1 1954 118 40 0 chr5 31655489 31655810 -167974340 - AluSx SINE Alu 0 332 1 254 254 30 15 chr5 31656100 31656167 -167973983 - L2 LINE L2 -4 3268 3201 337 309 35 50 chr5 31656431 31656632 -167973518 - L3 LINE CR1 -555 1022 825 2315 109 0 3 chr5 31656715 31657019 -167973131 - AluSx SINE Alu -9 303 1 2067 128 7 0 chr5 31657165 31657462 -167972688 + AluSx SINE Alu 4 302 -10 2053 133 7 3 chr5 31657492 31657792 -167972358 + AluSx SINE Alu 1 301 -11 2130 96 7 4 chr5 31658217 31658498 -167971652 + AluSq SINE Alu 1 282 -31 252 0 0 0 chr5 31658499 31658527 -167971623 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 2025 133 3 11 chr5 31658535 31658821 -167971329 + AluSx SINE Alu 1 284 -28 1322 213 75 22 chr5 31660299 31660727 -167969423 + L1MC4 LINE L1 7050 7526 -297 2243 117 0 13 chr5 31661032 31661341 -167968809 + AluSg SINE Alu 2 306 -4 833 176 63 31 chr5 31661343 31661502 -167968648 + AluJo/FRAM SINE Alu 131 294 -18 2069 123 0 13 chr5 31661659 31661960 -167968190 + AluSx SINE Alu 5 301 -11 251 282 39 0 chr5 31662048 31662126 -167968024 + L2 LINE L2 3191 3271 -1 2130 106 27 3 chr5 31662892 31663184 -167966966 + AluSx SINE Alu 1 299 -13 1494 106 0 37 chr5 31663872 31664117 -167966033 + AluSg/x SINE Alu 68 303 -9 313 313 35 50 chr5 31664200 31664401 -167965749 + L3 LINE CR1 825 1022 -555 254 254 30 15 chr5 31664665 31664732 -167965418 + L2 LINE L2 3201 3268 -4 1926 108 52 7 chr5 31665022 31665310 -167964840 + AluSx SINE Alu 1 301 -11 927 180 19 10 chr5 31665260 31665466 -167964684 + AluJo SINE Alu 85 292 -20 331 144 22 122 chr5 31665467 31665557 -167964593 - L1MB7 LINE L1 -57 6127 6047 433 83 0 17 chr5 31665934 31665994 -167964156 + AluSp/q SINE Alu 226 321 0 294 0 27 0 chr5 31665994 31666031 -167964119 + (CAAA)n Simple_repeat Simple_repeat 2 164 0 1950 126 13 3 chr5 31666059 31666368 -167963782 - AluSq SINE Alu -1 312 1 1873 144 0 3 chr5 31666606 31666905 -167963245 - AluJo SINE Alu -14 298 1 183 80 0 0 chr5 31667017 31667042 -167963108 + (CA)n Simple_repeat Simple_repeat 1 25 0 2344 83 0 3 chr5 31667358 31667671 -167962479 - AluSx SINE Alu 0 312 1 2336 96 0 0 chr5 31669141 31669454 -167960696 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 31669801 31669825 -167960325 + (A)n Simple_repeat Simple_repeat 1 24 0 720 228 91 121 chr5 31669834 31670307 -167959843 - LTR40a LTR ERVL -60 459 1 782 241 131 24 chr5 31672971 31673261 -167956889 - HAL1 LINE L1 -2183 324 4 433 238 135 8 chr5 31673290 31673416 -167956734 - MIR SINE MIR -118 144 3 298 79 0 0 chr5 31673562 31673600 -167956550 - U2 snRNA snRNA -150 38 1 2070 115 3 0 chr5 31674154 31674449 -167955701 - AluSx SINE Alu -16 296 1 1916 133 17 7 chr5 31674885 31675186 -167954964 - AluSx SINE Alu -8 304 1 1797 100 0 0 chr5 31675791 31676031 -167954119 - AluSx SINE Alu -12 300 61 681 157 0 60 chr5 31676032 31676166 -167953984 - FLAM_A SINE Alu -7 126 1 1666 80 59 80 chr5 31676456 31676777 -167953373 - AluY SINE Alu 0 315 1 228 322 11 35 chr5 31677343 31677430 -167952720 + MIR SINE MIR 20 104 -104 2203 95 0 7 chr5 31678372 31678667 -167951483 - AluSg SINE Alu -16 294 2 642 196 45 124 chr5 31678670 31678775 -167951375 + ORSL DNA AcHobo 31 143 -132 2067 108 3 29 chr5 31678775 31679089 -167951061 + AluSc SINE Alu 1 306 -3 642 196 45 124 chr5 31679089 31679249 -167950901 + ORSL DNA AcHobo 143 275 0 398 294 136 44 chr5 31679272 31679500 -167950650 + MIR SINE MIR 4 252 -10 5892 94 46 27 chr5 31679616 31682367 -167947783 + SVA Other Other 12 1369 -17 261 0 0 0 chr5 31682373 31682402 -167947748 + (CAA)n Simple_repeat Simple_repeat 2 30 0 186 103 0 0 chr5 31682423 31682452 -167947698 + (A)n Simple_repeat Simple_repeat 1 29 0 897 28 0 0 chr5 31682460 31682567 -167947583 + AluY SINE Alu 2 108 -203 1774 64 0 30 chr5 31682567 31682800 -167947350 + AluY SINE Alu 69 294 -17 2139 98 3 35 chr5 31682805 31683120 -167947030 + AluSx SINE Alu 1 305 -7 237 303 124 0 chr5 31683441 31683530 -167946620 - MIR3 SINE MIR -32 176 77 364 298 58 0 chr5 31683864 31683985 -167946165 + MIR SINE MIR 20 147 -61 1906 151 3 0 chr5 31684146 31684450 -167945700 - AluSq SINE Alu -8 305 1 2079 117 0 0 chr5 31684570 31684861 -167945289 + AluSq SINE Alu 1 291 -22 1952 117 3 29 chr5 31685942 31686249 -167943901 - AluSc SINE Alu -10 299 1 22 35 0 0 chr5 31686319 31686348 -167943802 + AT_rich Low_complexity Low_complexity 1 29 0 224 261 14 14 chr5 31686554 31686628 -167943522 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr5 31686688 31686716 -167943434 + AT_rich Low_complexity Low_complexity 1 28 0 1819 154 3 3 chr5 31686758 31687064 -167943086 - AluSx SINE Alu -6 306 1 708 245 70 54 chr5 31687134 31687282 -167942868 + L1ME3A LINE L1 5139 5283 -881 2180 98 14 0 chr5 31687282 31687578 -167942572 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr5 31687582 31687604 -167942546 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 708 245 70 54 chr5 31687604 31687862 -167942288 + L1ME3A LINE L1 5285 5546 -618 604 231 62 0 chr5 31687985 31688115 -167942035 + MER58C DNA MER1_type 34 171 -44 1503 218 66 48 chr5 31688143 31688640 -167941510 + L1ME3A LINE L1 5650 6165 -2 316 216 54 0 chr5 31690058 31690132 -167940018 - MIR SINE MIR -108 154 77 2123 103 10 0 chr5 31690459 31690751 -167939399 - AluSx SINE Alu -17 295 1 1512 159 19 30 chr5 31691070 31691372 -167938778 + AluJo SINE Alu 14 312 0 786 194 133 0 chr5 31691387 31691567 -167938583 + MER3 DNA MER1_type 6 209 0 280 200 0 0 chr5 31691525 31691575 -167938575 - MER3 DNA MER1_type -120 89 40 * 2117 104 0 0 chr5 31692676 31692964 -167937186 - AluSx SINE Alu -23 289 2 186 43 0 0 chr5 31693304 31693327 -167936823 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 909 229 0 0 chr5 31693328 31693494 -167936656 - FRAM SINE Alu 0 166 1 401 171 0 0 chr5 31693965 31694041 -167936109 - MER116 DNA Mariner -4 76 1 390 242 58 25 chr5 31694520 31694640 -167935510 + MIR SINE MIR 94 217 -45 2079 134 0 10 chr5 31694831 31695145 -167935005 - AluJb SINE Alu -1 311 1 23 54 0 0 chr5 31695263 31695300 -167934850 + AT_rich Low_complexity Low_complexity 1 37 0 257 343 37 22 chr5 31695388 31695522 -167934628 - MIR SINE MIR -119 143 8 1680 159 18 0 chr5 31695740 31696017 -167934133 - AluJo SINE Alu -30 282 1 1875 133 0 33 chr5 31697327 31697628 -167932522 + AluSx SINE Alu 1 291 -21 23 0 0 0 chr5 31698876 31698899 -167931251 + AT_rich Low_complexity Low_complexity 1 23 0 2273 85 0 16 chr5 31698903 31699210 -167930940 + AluSq SINE Alu 1 302 -11 296 218 245 20 chr5 31701121 31701268 -167928882 + MIR SINE MIR 82 261 -1 242 330 64 18 chr5 31701914 31702023 -167928127 + MIR3 SINE MIR 77 190 -18 797 178 0 0 chr5 31702160 31702278 -167927872 + FLAM_C SINE Alu 1 118 -15 645 148 96 26 chr5 31702471 31702586 -167927564 - FLAM_C SINE Alu -16 127 5 2073 127 0 0 chr5 31702923 31703223 -167926927 - AluJb SINE Alu -12 300 1 1823 118 40 0 chr5 31703557 31703863 -167926287 - AluSx SINE Alu 0 317 1 283 254 30 15 chr5 31704153 31704220 -167925930 - L2 LINE L2 -4 3268 3201 404 311 29 62 chr5 31704484 31704728 -167925422 - L3 LINE CR1 -555 1022 787 2186 109 0 3 chr5 31704768 31705072 -167925078 - AluSx SINE Alu -9 303 1 2016 133 0 0 chr5 31705215 31705517 -167924633 + AluSx SINE Alu 1 302 -10 1928 133 7 3 chr5 31705547 31705847 -167924303 + AluSx SINE Alu 1 301 -11 2009 96 7 4 chr5 31706272 31706553 -167923597 + AluSq SINE Alu 1 282 -31 216 0 0 0 chr5 31706554 31706578 -167923572 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 1879 136 3 11 chr5 31706586 31706872 -167923278 + AluSx SINE Alu 1 284 -28 1800 213 97 18 chr5 31708351 31708848 -167921302 + L1MC4 LINE L1 7129 7664 -378 288 312 13 0 chr5 31709050 31709127 -167921023 - MER5C DNA MER1_type -245 79 2 1000 215 40 15 chr5 31709207 31709360 -167920790 + L1MC4 LINE L1 7759 7924 -118 186 103 0 0 chr5 31709360 31709389 -167920761 + (TG)n Simple_repeat Simple_repeat 2 30 0 1000 215 40 15 chr5 31709389 31709509 -167920641 + L1MC4 LINE L1 7924 8039 -3 2192 101 7 0 chr5 31709512 31709810 -167920340 + AluSg SINE Alu 1 300 -10 1763 101 90 0 chr5 31711239 31711506 -167918644 + AluSp SINE Alu 1 291 -22 1876 90 0 0 chr5 31712974 31713219 -167916931 + AluSx SINE Alu 1 245 -67 2223 94 0 3 chr5 31715338 31715637 -167914513 - AluSx SINE Alu -14 298 1 198 288 119 34 chr5 31715748 31715866 -167914284 + MIR SINE MIR 2 129 -133 277 240 40 40 chr5 31715901 31715976 -167914174 + L1ME4a LINE L1 5974 6048 -73 2415 101 0 0 chr5 31716529 31716837 -167913313 + AluSx SINE Alu 1 308 -4 21 57 0 0 chr5 31716875 31716910 -167913240 + AT_rich Low_complexity Low_complexity 1 35 0 682 153 8 17 chr5 31717140 31717258 -167912892 - L1MB5 LINE L1 -3 6171 6055 217 359 111 8 chr5 31717768 31717885 -167912265 - MIR SINE MIR -63 145 17 2410 91 7 0 chr5 31718198 31718507 -167911643 + AluSq SINE Alu 1 311 -2 2266 115 0 13 chr5 31718885 31719197 -167910953 + AluSg SINE Alu 2 309 -1 825 177 63 32 chr5 31719199 31719357 -167910793 + AluJo/FRAM SINE Alu 131 293 -19 2172 116 3 13 chr5 31719514 31719825 -167910325 + AluSx SINE Alu 5 312 0 2407 79 0 13 chr5 31720062 31720367 -167909783 + AluSq SINE Alu 1 301 -12 2541 72 0 3 chr5 31720604 31720910 -167909240 + AluY SINE Alu 1 305 -6 2984 71 8 5 chr5 31721238 31721632 -167908518 + L1PA10 LINE L1 5771 6165 -3 225 0 0 0 chr5 31722257 31722282 -167907868 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 2170 80 14 4 chr5 31722282 31722557 -167907593 - AluY SINE Alu -32 279 2 2334 103 0 0 chr5 31722562 31722863 -167907287 - AluSx SINE Alu -11 301 1 226 272 43 22 chr5 31723071 31723163 -167906987 + MIR SINE MIR 156 249 -13 233 196 0 36 chr5 31723243 31723299 -167906851 + L1MC4 LINE L1 6656 6709 -1333 270 246 70 53 chr5 31723540 31723711 -167906439 - L1ME4a LINE L1 -7 6114 5941 2208 100 0 17 chr5 31724220 31724520 -167905630 - AluSx SINE Alu -17 295 1 454 268 87 0 chr5 31724832 31725015 -167905135 + MIR SINE MIR 23 221 -41 2237 110 17 0 chr5 31725491 31725791 -167904359 - AluSx SINE Alu -7 305 1 1121 149 26 0 chr5 31725797 31725992 -167904158 - L1MA6 LINE L1 0 6300 6101 2386 88 3 3 chr5 31725992 31726286 -167903864 - AluSx SINE Alu -18 294 1 878 167 28 39 chr5 31726322 31726502 -167903648 - L1 LINE L1 -1439 4707 4530 509 96 27 0 chr5 31726943 31727016 -167903134 - L1MA6 LINE L1 -75 6225 6151 2165 86 0 47 chr5 31727202 31727532 -167902618 - AluSq SINE Alu 0 316 1 1159 175 51 27 chr5 31731743 31731823 -167898327 - L1MD3 LINE L1 -1 7994 7917 2607 66 0 0 chr5 31731823 31732126 -167898024 - AluSg SINE Alu -7 303 1 1159 175 51 27 chr5 31732126 31732302 -167897848 - L1MD3 LINE L1 -78 7917 7732 2284 107 0 0 chr5 31732535 31732834 -167897316 + AluSx SINE Alu 1 299 -13 2226 108 3 0 chr5 31732834 31733128 -167897022 + AluSx SINE Alu 1 296 -16 2471 174 5 18 chr5 31734002 31734239 -167895911 - Tigger2a DNA MER2_type -2276 432 202 2070 148 0 7 chr5 31734239 31734536 -167895614 + AluSx SINE Alu 1 295 -17 2471 174 5 18 chr5 31734536 31734736 -167895414 - Tigger2a DNA MER2_type -2506 202 1 1294 147 15 79 chr5 31735171 31735436 -167894714 + AluJo SINE Alu 51 298 -14 2328 72 0 34 chr5 31736262 31736583 -167893567 - AluY SINE Alu 0 311 2 2213 100 0 7 chr5 31736870 31737160 -167892990 - AluSx SINE Alu -24 288 1 1994 145 34 0 chr5 31737371 31737667 -167892483 - AluJb SINE Alu -6 306 1 2083 93 55 14 chr5 31738513 31738802 -167891348 + AluSx SINE Alu 1 301 -11 414 259 88 0 chr5 31740510 31740657 -167889493 + MER5B DNA MER1_type 19 178 0 669 230 126 0 chr5 31741926 31742100 -167888050 - MIR SINE MIR -59 203 8 441 204 150 26 chr5 31743345 31743458 -167886692 + FLAM_A SINE Alu 1 127 -6 254 273 40 10 chr5 31743649 31743748 -167886402 + L1MEc LINE L1 1259 1360 -5036 185 0 40 0 chr5 31743783 31743808 -167886342 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 928 174 7 0 chr5 31743817 31743972 -167886178 + FRAM SINE Alu 5 160 -16 261 239 206 43 chr5 31743989 31744198 -167885952 + HAL1 LINE L1 1404 1646 -861 537 133 0 0 chr5 31744668 31744743 -167885407 + AluS SINE Alu 2 76 -237 732 158 17 0 chr5 31744904 31745024 -167885126 - AluSg/x SINE Alu -18 294 173 1833 107 23 4 chr5 31745025 31745288 -167884862 + AluSx SINE Alu 44 311 -1 1901 156 7 0 chr5 31745395 31745684 -167884466 + AluJb SINE Alu 1 291 -21 225 0 0 0 chr5 31745684 31745709 -167884441 + (CAAT)n Simple_repeat Simple_repeat 1 25 0 279 305 88 25 chr5 31745709 31746027 -167884123 + L1ME LINE L1 5262 5599 -563 496 208 28 9 chr5 31746349 31746455 -167883695 - MLT1J LTR MaLR -3 508 401 3329 111 56 10 chr5 31746493 31746996 -167883154 - MER1A DNA MER1_type -1 526 1 363 274 9 44 chr5 31747022 31747135 -167883015 - MIR SINE MIR -70 192 84 1077 187 9 14 chr5 31747899 31748113 -167882037 + AluJo SINE Alu 86 298 -14 21 0 0 0 chr5 31750709 31750730 -167879420 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 31751423 31751451 -167878699 + AT_rich Low_complexity Low_complexity 1 28 0 2272 62 0 62 chr5 31752143 31752452 -167877698 + AluY SINE Alu 1 290 -21 499 161 0 0 chr5 31752993 31753080 -167877070 + AluS SINE Alu 2 88 -224 2523 64 3 0 chr5 31753492 31753789 -167876361 + AluSc SINE Alu 1 298 -11 240 347 60 0 chr5 31754039 31754189 -167875961 + L1M4 LINE L1 3729 3887 -2259 2230 89 4 4 chr5 31754213 31754494 -167875656 + AluSx SINE Alu 1 281 -31 767 125 75 0 chr5 31754664 31754784 -167875366 - FLAM_C SINE Alu -13 130 2 2420 87 0 0 chr5 31754957 31755257 -167874893 - AluY SINE Alu -11 300 1 2237 90 0 7 chr5 31755260 31755549 -167874601 - AluSc SINE Alu -14 295 9 354 299 105 36 chr5 31755660 31755994 -167874156 + L1M4 LINE L1 4454 4810 -1336 205 195 0 0 chr5 31756212 31756253 -167873897 + A-rich Low_complexity Low_complexity 2 42 0 302 0 26 0 chr5 31756463 31756501 -167873649 + (CA)n Simple_repeat Simple_repeat 2 40 0 1936 156 0 23 chr5 31757097 31757405 -167872745 + AluJo SINE Alu 1 301 -11 495 265 118 79 chr5 31757816 31758106 -167872044 + HAL1b LINE L1 222 499 -849 2279 89 3 3 chr5 31758106 31758398 -167871752 + AluSg SINE Alu 1 292 -18 495 265 118 79 chr5 31758398 31758699 -167871451 + HAL1b LINE L1 499 836 -512 1925 168 0 3 chr5 31758908 31759206 -167870944 + AluJo SINE Alu 1 297 -15 508 162 36 102 chr5 31759258 31759301 -167870849 - L1MB3 LINE L1 -2 6181 6137 2385 79 7 0 chr5 31759301 31759591 -167870559 - AluSg1 SINE Alu -17 292 1 508 162 36 102 chr5 31759591 31759674 -167870476 - L1MB3 LINE L1 -46 6137 6066 2248 121 0 0 chr5 31759674 31759972 -167870178 - AluSx SINE Alu -14 298 1 508 162 36 102 chr5 31759972 31760011 -167870139 - L1MB3 LINE L1 -117 6066 6026 2378 183 79 82 chr5 31760066 31760372 -167869778 + L1MC5 LINE L1 6649 6955 -1006 1697 165 57 20 chr5 31760372 31760778 -167869372 + L1MA7 LINE L1 5865 6285 -6 2378 183 79 82 chr5 31760778 31760982 -167869168 + L1MC5 LINE L1 6955 7158 -803 2185 104 0 26 chr5 31760982 31761290 -167868860 + AluSg SINE Alu 1 300 -10 2327 57 13 57 chr5 31761295 31761610 -167868540 + AluY SINE Alu 2 302 -9 2378 183 79 82 chr5 31761610 31761978 -167868172 + L1MC5 LINE L1 7162 7531 -430 301 265 43 60 chr5 31762014 31762131 -167868019 + L1ME3A LINE L1 5967 6081 -89 1740 136 123 7 chr5 31762603 31762904 -167867246 + MER1B DNA MER1_type 2 337 0 280 293 193 27 chr5 31762909 31763274 -167866876 + L1MC/D LINE L1 5491 5915 -321 666 219 58 13 chr5 31765000 31765155 -167864995 + MER58A DNA MER1_type 46 207 -17 533 181 145 7 chr5 31767792 31767930 -167862220 + L1ME4a LINE L1 5962 6118 -3 717 200 171 0 chr5 31768039 31768209 -167861941 - MER3 DNA MER1_type -3 206 8 1215 299 68 39 chr5 31768361 31768919 -167861231 + L1MEc LINE L1 109 696 -5700 2037 123 0 25 chr5 31768919 31769237 -167860913 + AluSq SINE Alu 1 310 -3 1215 299 68 39 chr5 31769237 31769431 -167860719 + L1MEc LINE L1 696 883 -5513 481 152 20 61 chr5 31769433 31769532 -167860618 + AluJ SINE Alu 85 179 -133 1592 89 9 22 chr5 31769533 31769757 -167860393 + AluSq SINE Alu 93 313 0 534 251 98 6 chr5 31769771 31769934 -167860216 + MIR SINE MIR 85 262 0 2428 78 0 0 chr5 31770389 31770682 -167859468 - AluY SINE Alu -18 293 1 603 110 110 0 chr5 31770851 31770951 -167859199 + AluJ SINE Alu 183 293 -19 311 357 14 21 chr5 31771315 31771455 -167858695 + L2 LINE L2 3134 3272 0 289 266 43 0 chr5 31771461 31771555 -167858595 + MIR SINE MIR 47 144 -118 298 167 106 15 chr5 31771557 31771623 -167858527 - LTR16A1 LTR ERVL -2 455 384 2217 86 3 80 chr5 31771954 31772101 -167858049 + AluSx SINE Alu 1 109 -203 2475 45 25 0 chr5 31772101 31772387 -167857763 + AluSp SINE Alu 2 294 -19 2217 86 3 80 chr5 31772387 31772575 -167857575 + AluSx SINE Alu 109 310 -2 810 221 55 3 chr5 31772747 31772940 -167857210 - MLT1F1 LTR MaLR -298 251 7 2516 60 0 3 chr5 31773055 31773353 -167856797 - AluY SINE Alu -14 297 1 1466 137 9 5 chr5 31775170 31775389 -167854761 + AluJb SINE Alu 87 306 -6 21 57 0 0 chr5 31775426 31775461 -167854689 + AT_rich Low_complexity Low_complexity 1 35 0 394 147 0 0 chr5 31775928 31776003 -167854147 + L1MB3 LINE L1 6108 6182 -1 24 32 0 0 chr5 31776089 31776120 -167854030 + AT_rich Low_complexity Low_complexity 1 31 0 334 235 221 7 chr5 31776752 31776888 -167853262 + Charlie7 DNA MER1_type 37 201 -2411 483 212 8 17 chr5 31776951 31777069 -167853081 + Charlie7 DNA MER1_type 329 445 -2167 21 36 0 0 chr5 31777272 31777300 -167852850 + AT_rich Low_complexity Low_complexity 1 28 0 970 191 35 111 chr5 31777300 31777424 -167852726 + AluJo SINE Alu 1 133 -169 1942 155 0 10 chr5 31777424 31777720 -167852430 - AluSx SINE Alu -19 293 1 970 191 35 111 chr5 31777720 31777910 -167852240 + AluJo SINE Alu 133 291 -11 484 143 66 11 chr5 31777936 31778027 -167852123 + HY3 scRNA scRNA 3 98 -3 1107 299 124 0 chr5 31778154 31778509 -167851641 + MLT1I LTR MaLR 7 405 -4 1765 166 28 0 chr5 31779095 31779384 -167850766 + AluSx SINE Alu 1 297 -15 2431 80 0 3 chr5 31779394 31779694 -167850456 + AluSq SINE Alu 1 299 -14 1025 174 135 0 chr5 31779844 31780051 -167850099 + MER46A DNA MER2_type 1 235 -1 2099 123 10 7 chr5 31780153 31780455 -167849695 - AluSp SINE Alu -10 303 1 2172 123 0 0 chr5 31780573 31780866 -167849284 + AluSq SINE Alu 1 293 -20 2265 117 0 0 chr5 31781097 31781395 -167848755 - AluSg SINE Alu -8 302 5 23 0 0 0 chr5 31781474 31781497 -167848653 + AT_rich Low_complexity Low_complexity 1 23 0 674 171 105 106 chr5 31781524 31781566 -167848584 - MER33 DNA MER1_type -2267 318 277 1090 58 0 7 chr5 31781566 31781736 -167848414 - L1PA4 LINE L1 0 6155 6003 674 171 105 106 chr5 31781736 31782046 -167848104 - MER33 DNA MER1_type -2308 277 1 1294 174 8 2 chr5 31782350 31782619 -167847531 - MER2 DNA MER2_type -24 321 2 209 310 103 41 chr5 31782645 31782790 -167847360 + L2 LINE L2 2599 2752 -562 474 246 161 0 chr5 31782943 31783167 -167846983 + HAL1 LINE L1 863 1122 -1385 396 229 124 67 chr5 31783213 31783419 -167846731 + HAL1 LINE L1 1258 1484 -1023 1138 181 110 79 chr5 31783419 31783571 -167846579 + AluJb SINE Alu 1 147 -155 1969 117 19 45 chr5 31783571 31783879 -167846271 + AluSx SINE Alu 1 300 -12 1138 181 110 79 chr5 31783879 31784018 -167846132 + AluJb SINE Alu 147 301 -1 396 229 124 67 chr5 31784018 31784078 -167846072 + HAL1 LINE L1 1484 1539 -968 2031 140 0 3 chr5 31784078 31784378 -167845772 + AluSx SINE Alu 1 299 -13 9073 21 4 272 chr5 31784774 31786659 -167843491 + SVA Other Other 7 1386 0 29 0 0 0 chr5 31786659 31786688 -167843462 + AT_rich Low_complexity Low_complexity 1 29 0 1348 196 16 8 chr5 31787525 31787780 -167842370 + AluJo SINE Alu 26 282 -30 2022 146 7 3 chr5 31789200 31789501 -167840649 + AluJb SINE Alu 1 302 -10 311 242 40 74 chr5 31789910 31789999 -167840151 + L1ME4a LINE L1 5822 5906 -215 1328 123 76 0 chr5 31789999 31790210 -167839940 + MER30 DNA MER1_type 4 230 0 311 242 40 74 chr5 31790210 31790269 -167839881 + L1ME4a LINE L1 5906 5965 -156 689 121 0 0 chr5 31790547 31790646 -167839504 + AluSc SINE Alu 205 303 -6 191 200 200 0 chr5 31791129 31791189 -167838961 + MIR SINE MIR 174 245 -17 463 268 189 25 chr5 31791219 31791499 -167838651 - MER102a DNA MER1_type -3 327 2 1297 121 16 5 chr5 31791684 31791701 -167838449 + AluSq SINE Alu 113 128 -185 2330 85 0 19 chr5 31791701 31792017 -167838133 + AluY SINE Alu 1 310 -1 1297 121 16 5 chr5 31792017 31792189 -167837961 + AluSq SINE Alu 128 304 -9 245 111 222 0 chr5 31792474 31792528 -167837622 + MLT1F1 LTR MaLR 502 567 0 822 198 88 10 chr5 31792528 31792720 -167837430 + L1MB8 LINE L1 5972 6178 0 1987 116 46 0 chr5 31792907 31793192 -167836958 + AluSx SINE Alu 1 298 -14 259 293 111 60 chr5 31793194 31793811 -167836339 + L1M4 LINE L1 4191 4869 -1277 1138 176 72 9 chr5 31793811 31794033 -167836117 - MER46A DNA MER2_type 0 236 1 259 293 111 60 chr5 31794033 31794304 -167835846 + L1M4 LINE L1 4869 5125 -1021 27 51 0 17 chr5 31794411 31794438 -167835712 + AT_rich Low_complexity Low_complexity 1 27 -31 1380 188 74 7 chr5 31794438 31794709 -167835441 + AluJo SINE Alu 1 289 -23 27 51 0 17 chr5 31794709 31794740 -167835410 + AT_rich Low_complexity Low_complexity 27 58 0 1920 141 55 69 chr5 31794903 31795321 -167834829 + L1MB3 LINE L1 5759 6170 -13 2339 101 0 0 chr5 31795321 31795618 -167834532 - AluSg SINE Alu -13 297 1 225 122 82 0 chr5 31795640 31795689 -167834461 + L1MC/D LINE L1 5423 5475 -2333 367 255 176 30 chr5 31796463 31796663 -167833487 - MIR SINE MIR -29 233 11 1643 141 177 3 chr5 31796734 31797039 -167833111 - MER46B DNA MER2_type 0 236 4 240 359 63 0 chr5 31797324 31797466 -167832684 - MIR SINE MIR -111 151 1 698 161 36 0 chr5 31797650 31797762 -167832388 + FRAM SINE Alu 43 158 -18 22 70 0 0 chr5 31797772 31797815 -167832335 + AT_rich Low_complexity Low_complexity 1 43 0 851 153 0 0 chr5 31797815 31797933 -167832217 - FLAM_C SINE Alu -25 118 1 250 316 92 0 chr5 31798112 31798188 -167831962 - L2 LINE L2 -2 3270 3188 2765 32 0 0 chr5 31798341 31798649 -167831501 + AluY SINE Alu 1 308 -3 1995 127 3 34 chr5 31798676 31798998 -167831152 + AluJo SINE Alu 1 312 0 2473 55 0 0 chr5 31799302 31799622 -167830528 + AluY SINE Alu 1 320 0 237 105 0 0 chr5 31799722 31799760 -167830390 + L1MA1 LINE L1 6265 6302 0 2477 64 0 0 chr5 31799767 31800062 -167830088 + AluY SINE Alu 1 295 -16 2597 53 0 0 chr5 31800353 31800653 -167829497 + AluY SINE Alu 1 300 -11 1749 118 91 8 chr5 31800950 31801213 -167828937 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr5 31801220 31801241 -167828909 + AT_rich Low_complexity Low_complexity 1 21 0 540 224 73 44 chr5 31801795 31801952 -167828198 - MER106B DNA MER1_type 0 1059 908 2369 63 3 10 chr5 31801952 31802251 -167827899 - AluY SINE Alu -14 297 1 540 224 73 44 chr5 31802251 31802331 -167827819 - MER106B DNA MER1_type -151 908 2 29 47 0 0 chr5 31802385 31802428 -167827722 + AT_rich Low_complexity Low_complexity 1 43 0 2159 126 7 0 chr5 31802454 31802755 -167827395 - AluSx SINE Alu -6 306 4 2147 133 0 0 chr5 31802859 31803160 -167826990 + AluSx SINE Alu 1 301 -11 270 269 39 0 chr5 31803248 31803326 -167826824 + L2 LINE L2 3191 3271 -1 2075 121 31 0 chr5 31804093 31804382 -167825768 + AluSq SINE Alu 1 298 -15 2385 108 0 0 chr5 31804725 31805032 -167825118 - AluSq SINE Alu -6 307 1 1803 141 27 37 chr5 31805229 31805526 -167824624 + AluJo SINE Alu 1 294 -18 236 200 235 0 chr5 31805835 31805920 -167824230 - MARNA DNA Mariner -62 524 420 862 119 13 50 chr5 31806396 31806555 -167823595 + FRAM SINE Alu 1 40 0 1869 137 3 31 chr5 31806555 31806847 -167823303 + AluJb SINE Alu 4 287 -25 268 306 38 25 chr5 31807081 31807241 -167822909 + MARNA DNA Mariner 302 463 -123 24 67 0 0 chr5 31807658 31807703 -167822447 + AT_rich Low_complexity Low_complexity 1 45 0 544 191 296 32 chr5 31807710 31807930 -167822220 + L1ME3A LINE L1 5810 6087 -83 563 158 105 18 chr5 31808229 31808343 -167821807 + FLAM_A SINE Alu 5 128 -5 1494 93 69 5 chr5 31808742 31808958 -167821192 + MER30 DNA MER1_type 1 230 0 2334 92 0 3 chr5 31809226 31809532 -167820618 + AluSx SINE Alu 1 305 -7 2298 94 0 7 chr5 31809973 31810282 -167819868 + AluSc SINE Alu 1 307 -2 1078 65 79 0 chr5 31810282 31810421 -167819729 + AluSp SINE Alu 134 283 -30 42 20 0 0 chr5 31811318 31811367 -167818783 + GC_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr5 31811492 31811517 -167818633 + GC_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 31812801 31812826 -167817324 + AT_rich Low_complexity Low_complexity 1 25 0 2647 43 3 0 chr5 31813050 31813354 -167816796 - AluY SINE Alu -6 305 1 1086 152 11 0 chr5 31813458 31813636 -167816514 + FRAM SINE Alu 1 172 -4 2614 40 0 0 chr5 31813638 31813934 -167816216 + AluY SINE Alu 1 296 -15 810 221 55 3 chr5 31814049 31814242 -167815908 + MLT1F1 LTR MaLR 7 251 -298 2140 81 3 50 chr5 31814416 31814588 -167815562 - AluSx SINE Alu 0 307 128 219 36 0 0 chr5 31814588 31814616 -167815534 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2394 44 25 0 chr5 31814616 31814891 -167815259 - AluSp SINE Alu -30 283 2 2140 81 3 50 chr5 31814891 31815038 -167815112 - AluSx SINE Alu -177 130 1 298 167 106 15 chr5 31815369 31815435 -167814715 + LTR16A1 LTR ERVL 384 455 -2 331 234 43 0 chr5 31815437 31815531 -167814619 - MIR SINE MIR -118 144 47 311 357 14 21 chr5 31815537 31815677 -167814473 - L2 LINE L2 0 3272 3134 1737 120 51 55 chr5 31816044 31816336 -167813814 - AluJb SINE Alu -21 291 1 394 314 119 31 chr5 31816509 31816827 -167813323 - L2 LINE L2 -694 2620 2275 2345 92 0 19 chr5 31816836 31817151 -167812999 - AluSc SINE Alu 0 309 1 3344 183 57 28 chr5 31817295 31817538 -167812612 - L1MD2 LINE L1 -23 6336 6102 1869 154 13 19 chr5 31817538 31817850 -167812300 + AluJo SINE Alu 1 310 -2 3344 183 57 28 chr5 31817850 31818235 -167811915 - L1MD2 LINE L1 -257 6102 5682 2171 115 3 0 chr5 31818235 31818246 -167811904 - AluSx SINE Alu 0 312 303 181 0 0 0 chr5 31818246 31818266 -167811884 + (TTG)n Simple_repeat Simple_repeat 2 180 0 2171 115 3 0 chr5 31818266 31818549 -167811601 - AluSx SINE Alu -9 303 1 3344 183 57 28 chr5 31818549 31818639 -167811511 - L1MD2 LINE L1 -677 5682 5596 363 135 0 0 chr5 31818705 31818757 -167811393 - L1MD2 LINE L1 -650 5592 5541 1504 103 42 0 chr5 31818905 31819119 -167811031 + MSTC LTR MaLR 1 223 -205 272 231 29 4 chr5 31819121 31819225 -167810925 - MIR SINE MIR -104 158 15 2055 218 77 61 chr5 31819428 31819595 -167810555 + MLT1E1 LTR MaLR 5 168 -486 2360 80 0 0 chr5 31819595 31819882 -167810268 + AluY SINE Alu 5 291 -20 2055 218 77 61 chr5 31819882 31819932 -167810218 + MLT1E1 LTR MaLR 168 216 -438 1779 163 108 44 chr5 31819932 31819987 -167810163 + MSTB1 LTR MaLR 1 51 -381 2060 142 0 22 chr5 31819987 31820304 -167809846 + AluJb SINE Alu 1 310 -2 1779 163 108 44 chr5 31820304 31820654 -167809496 + MSTB1 LTR MaLR 51 432 0 2055 218 77 61 chr5 31820654 31821060 -167809090 + MLT1E1 LTR MaLR 216 639 -15 380 220 110 0 chr5 31821060 31821178 -167808972 + L1MC4a LINE L1 2258 2388 -3758 2457 79 7 0 chr5 31821197 31821501 -167808649 - AluY SINE Alu -5 306 1 1359 179 38 60 chr5 31821502 31821762 -167808388 + L1MC4a LINE L1 4837 5101 -1045 2108 153 0 3 chr5 31821762 31822075 -167808075 - AluSx SINE Alu 0 312 1 1359 179 38 60 chr5 31822075 31822165 -167807985 + L1MC4a LINE L1 5101 5181 -965 2321 102 0 0 chr5 31822165 31822460 -167807690 + AluSg1 SINE Alu 1 295 -14 1359 179 38 60 chr5 31822460 31822476 -167807674 + L1MC4a LINE L1 5181 5196 -950 2299 125 0 0 chr5 31822484 31822796 -167807354 + AluSx SINE Alu 1 312 0 367 226 24 0 chr5 31822806 31822890 -167807260 + L1MC4a LINE L1 5171 5256 -890 2350 130 15 44 chr5 31822890 31823090 -167807060 + MSTB LTR MaLR 1 184 -242 2959 10 0 0 chr5 31823090 31823403 -167806747 + AluYb8 SINE Alu 1 313 -5 2350 130 15 44 chr5 31823403 31823610 -167806540 + MSTB LTR MaLR 184 396 -30 1086 172 0 20 chr5 31823611 31823809 -167806341 - AluJb SINE Alu -3 309 116 743 168 0 0 chr5 31823880 31823993 -167806157 + FLAM_C SINE Alu 21 133 -10 1942 129 17 20 chr5 31824158 31824452 -167805698 + AluJb SINE Alu 5 297 -15 2772 171 9 42 chr5 31824497 31824526 -167805624 + L1 LINE L1 4452 4480 -1666 2317 84 0 7 chr5 31824526 31824830 -167805320 - AluSg SINE Alu 0 302 1 1960 133 24 7 chr5 31824832 31825126 -167805024 - AluSx SINE Alu -13 299 1 2772 171 9 42 chr5 31825126 31825670 -167804480 + L1 LINE L1 4481 5010 -1136 248 219 62 0 chr5 31825673 31825737 -167804413 + L1MB7 LINE L1 6110 6177 -7 2132 122 3 0 chr5 31826281 31826576 -167803574 + AluSg SINE Alu 1 296 -14 2234 97 0 4 chr5 31826865 31827180 -167802970 - AluSx SINE Alu 0 318 5 2429 79 0 0 chr5 31827348 31827652 -167802498 + AluY SINE Alu 7 310 -1 1569 264 114 20 chr5 31827774 31828267 -167801883 - MLT1E LTR MaLR -52 541 3 2297 106 0 0 chr5 31828363 31828656 -167801494 - AluSx SINE Alu -19 293 1 860 249 175 25 chr5 31828714 31829108 -167801042 - MLT1H LTR MaLR -6 543 91 2273 120 0 0 chr5 31829332 31829641 -167800509 - AluSx SINE Alu -3 309 1 1698 271 56 4 chr5 31829691 31830156 -167799994 + L1MC4a LINE L1 5479 5967 -1841 2401 82 0 7 chr5 31830163 31830455 -167799695 - AluSg SINE Alu -20 290 1 24 67 0 0 chr5 31830609 31830654 -167799496 + AT_rich Low_complexity Low_complexity 1 45 0 2448 85 0 0 chr5 31830660 31830966 -167799184 - AluSc SINE Alu -3 306 1 908 142 49 59 chr5 31830978 31831208 -167798942 - L1MB8 LINE L1 -1 6183 5938 644 26 0 0 chr5 31831788 31831866 -167798284 - L1PA2 LINE L1 -3 6152 6075 2594 61 0 3 chr5 31832399 31832711 -167797439 + AluY SINE Alu 1 311 0 2495 94 0 0 chr5 31833107 31833415 -167796735 + AluSx SINE Alu 1 308 -4 355 235 20 0 chr5 31833591 31833689 -167796461 - L1MC4a LINE L1 -1897 5911 5812 294 196 0 0 chr5 31833691 31833742 -167796408 - L1PB4 LINE L1 -12 6144 6094 283 278 95 15 chr5 31833743 31833915 -167796235 - L1MB8 LINE L1 -477 5828 5638 1846 150 0 11 chr5 31833958 31834269 -167795881 - AluJb SINE Alu 0 308 1 2374 91 0 7 chr5 31834344 31834651 -167795499 - AluSx SINE Alu -7 305 1 2192 107 10 3 chr5 31834934 31835244 -167794906 + AluSx SINE Alu 1 312 0 2378 96 0 0 chr5 31835353 31835654 -167794496 - AluSq SINE Alu -12 301 1 22 0 0 0 chr5 31835837 31835859 -167794291 + AT_rich Low_complexity Low_complexity 1 22 0 2029 125 0 16 chr5 31836143 31836446 -167793704 - AluSx SINE Alu -12 300 3 240 35 0 0 chr5 31836939 31836968 -167793182 + (TG)n Simple_repeat Simple_repeat 2 30 0 2509 72 3 0 chr5 31837031 31837338 -167792812 - AluSx SINE Alu -4 308 1 410 119 13 0 chr5 31837449 31837525 -167792625 - L1P5 LINE L1 -703 5451 5375 265 234 0 16 chr5 31837520 31837584 -167792566 + L1ME4a LINE L1 5598 5660 -461 * 351 0 0 0 chr5 31837584 31837623 -167792527 + (CA)n Simple_repeat Simple_repeat 2 40 0 301 269 83 0 chr5 31837738 31837846 -167792304 + L1ME4a LINE L1 6003 6119 -2 408 217 5 13 chr5 31837979 31838069 -167792081 + L1MC4a LINE L1 6699 6776 -1032 414 128 51 0 chr5 31839274 31839352 -167790798 + AluJ/FRAM SINE Alu 231 312 0 262 227 0 30 chr5 31840553 31840619 -167789531 + MIR SINE MIR 127 190 -72 192 77 0 0 chr5 31841383 31841409 -167788741 + (A)n Simple_repeat Simple_repeat 1 26 0 1345 133 39 29 chr5 31841708 31841987 -167788163 - AluY SINE Alu -29 282 1 2501 241 65 16 chr5 31841987 31842844 -167787306 - L1MC4 LINE L1 -76 7966 7068 467 17 17 0 chr5 31842867 31842927 -167787223 - AluSc SINE Alu -14 295 235 1665 128 0 0 chr5 31843040 31843267 -167786883 - AluSx SINE Alu -85 227 1 222 224 0 52 chr5 31843712 31843770 -167786380 + MIR SINE MIR 28 82 -180 297 217 224 42 chr5 31843897 31844040 -167786110 + MIR SINE MIR 31 199 -63 33 43 0 0 chr5 31846217 31846264 -167783886 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr5 31846555 31846583 -167783567 + AT_rich Low_complexity Low_complexity 1 28 0 1724 141 4 23 chr5 31847067 31847330 -167782820 - AluSx SINE Alu -54 258 1 1338 140 169 33 chr5 31847330 31847551 -167782599 - MLT1A1 LTR MaLR -55 310 44 2230 92 6 16 chr5 31847551 31847866 -167782284 - AluSp SINE Alu -1 312 1 1338 140 169 33 chr5 31847866 31847916 -167782234 - MLT1A1 LTR MaLR -321 44 2 249 129 145 32 chr5 31848001 31848064 -167782086 - L1MB7 LINE L1 0 6178 6110 353 171 105 19 chr5 31848069 31848174 -167781976 + FLAM_C SINE Alu 18 131 -2 239 222 210 57 chr5 31848490 31848666 -167781484 + L1MC4 LINE L1 5713 5915 -1893 890 251 47 55 chr5 31850397 31850759 -167779391 + L1MC4 LINE L1 6700 7058 -984 1635 182 120 8 chr5 31850875 31851259 -167778891 - Charlie4a DNA MER1_type -80 428 2 2156 102 3 48 chr5 31851409 31851724 -167778426 + AluSg SINE Alu 1 301 -9 1085 214 12 20 chr5 31851800 31852052 -167778098 - AluJo SINE Alu -12 300 51 1237 284 102 22 chr5 31852363 31852950 -167777200 - L1MC4a LINE L1 -1736 6072 5439 1513 128 3 42 chr5 31852966 31853254 -167776896 - AluSx SINE Alu -35 277 1 2407 79 0 13 chr5 31853491 31853796 -167776354 - AluSq SINE Alu -12 301 1 2137 115 3 16 chr5 31854033 31854345 -167775805 - AluSx SINE Alu 0 312 5 833 177 63 32 chr5 31854501 31854659 -167775491 - AluJo/FRAM SINE Alu -19 293 131 2220 116 3 10 chr5 31854661 31854971 -167775179 - AluSg SINE Alu -1 309 2 1791 126 9 52 chr5 31855344 31855670 -167774480 - AluSq SINE Alu -1 312 1 4675 95 5 0 chr5 31855670 31856272 -167773878 - THE1A-int LTR MaLR -719 861 257 252 87 0 87 chr5 31856261 31856307 -167773843 - THE1A-int LTR MaLR -1516 64 23 * 263 113 19 57 chr5 31856347 31856400 -167773750 - THE1A LTR MaLR -2 353 303 198 167 0 0 chr5 31856868 31856904 -167773246 + GA-rich Low_complexity Low_complexity 2 37 0 3408 233 43 45 chr5 31856904 31857046 -167773104 + L1MC4 LINE L1 6916 7057 -985 2268 86 3 17 chr5 31857046 31857348 -167772802 + AluSg SINE Alu 1 298 -12 3408 233 43 45 chr5 31857348 31858247 -167771903 + L1MC4 LINE L1 7057 7956 -86 2271 105 0 13 chr5 31858247 31858551 -167771599 + AluY SINE Alu 1 300 -11 3408 233 43 45 chr5 31858551 31858633 -167771517 + L1MC4 LINE L1 7956 8037 -5 2188 131 7 0 chr5 31859056 31859361 -167770789 - AluSx SINE Alu -5 307 1 27 0 0 0 chr5 31910641 31910668 -167719482 + AT_rich Low_complexity Low_complexity 1 27 0 183 80 0 0 chr5 31913128 31913153 -167716997 + (A)n Simple_repeat Simple_repeat 1 25 0 383 55 0 18 chr5 31913691 31913746 -167716404 + (GGGA)n Simple_repeat Simple_repeat 1 54 0 24 0 0 0 chr5 31914128 31914152 -167715998 + AT_rich Low_complexity Low_complexity 1 24 0 186 156 0 0 chr5 31914722 31914767 -167715383 + G-rich Low_complexity Low_complexity 1 45 0 238 330 0 0 chr5 31919106 31919203 -167710947 + G-rich Low_complexity Low_complexity 1 97 0 198 91 0 0 chr5 31919339 31919372 -167710778 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 31919695 31919720 -167710430 + AT_rich Low_complexity Low_complexity 1 25 0 234 0 0 0 chr5 31927698 31927724 -167702426 + (G)n Simple_repeat Simple_repeat 1 26 0 284 145 0 16 chr5 31939562 31939624 -167690526 + (CTG)n Simple_repeat Simple_repeat 2 62 0 234 0 0 0 chr5 31941589 31941615 -167688535 + (G)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 31943193 31943214 -167686936 + GC_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr5 31946934 31946960 -167683190 + (A)n Simple_repeat Simple_repeat 1 26 0 1539 52 0 0 chr5 31951213 31951385 -167678765 - AluSx SINE Alu -140 172 1 955 155 23 11 chr5 31951467 31951641 -167678509 + LTR1 LTR ERV1 48 223 -562 2019 120 3 19 chr5 31951641 31951950 -167678200 + AluSg SINE Alu 1 304 -6 3038 107 25 19 chr5 31952161 31952646 -167677504 + LTR1 LTR ERV1 298 785 0 1979 151 0 22 chr5 31952705 31953022 -167677128 - AluSx SINE Alu 0 312 3 1905 115 38 7 chr5 31956534 31956821 -167673329 + AluSg SINE Alu 1 296 -14 440 243 88 15 chr5 31957381 31957517 -167672633 - MIR SINE MIR -113 149 4 3158 141 2 80 chr5 31957572 31957836 -167672314 + LTR26B LTR ERV1 1 284 -247 354 23 0 0 chr5 31957836 31957879 -167672271 + (CA)n Simple_repeat Simple_repeat 2 44 0 3158 141 2 80 chr5 31957879 31958007 -167672143 + LTR26B LTR ERV1 284 336 -195 1667 204 11 0 chr5 31958007 31958291 -167671859 + AluJo SINE Alu 1 287 -25 3158 141 2 80 chr5 31958291 31958473 -167671677 + LTR26B LTR ERV1 336 531 0 255 255 0 142 chr5 31958694 31958762 -167671388 + MER45 DNA AcHobo 1 50 -903 1928 138 22 26 chr5 31958762 31959074 -167671076 + AluJo SINE Alu 1 311 -1 255 255 0 142 chr5 31959074 31959111 -167671039 + MER45 DNA AcHobo 50 91 -862 * 272 89 111 0 chr5 31959108 31959153 -167670997 - AluSp/q SINE Alu -27 276 227 3582 168 22 26 chr5 31959310 31959493 -167670657 - MER57B-int LTR ERV1 -4070 3467 3285 2041 142 0 7 chr5 31959493 31959788 -167670362 - AluSg SINE Alu -17 293 1 3582 168 22 26 chr5 31959788 31960293 -167669857 - MER57B-int LTR ERV1 -4252 3285 2782 821 126 13 33 chr5 31960294 31960445 -167669705 - MER57B-int LTR ERV1 -3933 2013 1866 * 4917 165 33 14 chr5 31960444 31960937 -167669213 - MER57B-int LTR ERV1 -5166 2371 1852 2226 76 45 10 chr5 31960937 31961228 -167668922 + AluSg SINE Alu 1 301 -9 4917 165 33 14 chr5 31961228 31961611 -167668539 - MER57B-int LTR ERV1 -5685 1852 1478 1283 91 0 6 chr5 31961639 31961815 -167668335 - MER57B-int LTR ERV1 -6570 967 793 * 2419 151 24 19 chr5 31961813 31962224 -167667926 - MER57B-int LTR ERV1 -6860 677 265 931 95 7 7 chr5 31962240 31962388 -167667762 - MER57B LTR ERV1 0 434 287 1696 146 91 40 chr5 31962395 31962724 -167667426 + MER41-int LTR ERV1 382 727 -5219 1240 144 0 0 chr5 31962723 31962911 -167667239 + MER41-int LTR ERV1 1404 1591 -4355 * 679 126 0 18 chr5 31962909 31963020 -167667130 + MER41-int LTR ERV1 2477 2585 -4952 * 21 0 0 0 chr5 31963611 31963632 -167666518 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr5 31964540 31964567 -167665583 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 31965121 31965149 -167665001 + AT_rich Low_complexity Low_complexity 1 28 0 574 295 60 0 chr5 31965149 31965315 -167664835 - MIR SINE MIR -42 220 45 1270 122 0 0 chr5 31968723 31968887 -167661263 + AluSq SINE Alu 133 296 -17 2040 130 13 29 chr5 31969174 31969481 -167660669 - AluSx SINE Alu -10 302 1 22 35 0 0 chr5 31970036 31970065 -167660085 + AT_rich Low_complexity Low_complexity 1 29 0 2389 82 20 3 chr5 31970549 31970852 -167659298 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr5 31971651 31971672 -167658478 + AT_rich Low_complexity Low_complexity 1 21 0 282 159 89 33 chr5 31973185 31973275 -167656875 - L1MC/D LINE L1 -378 5800 5715 2159 93 7 17 chr5 31973509 31973798 -167656352 + AluSx SINE Alu 2 287 -25 1435 98 221 4 chr5 31974020 31974255 -167655895 + AluSg1 SINE Alu 2 287 -22 284 102 20 0 chr5 31974255 31974304 -167655846 + (GA)n Simple_repeat Simple_repeat 1 50 0 640 110 0 0 chr5 31974318 31974409 -167655741 - AluY SINE Alu -5 306 216 4341 131 53 36 chr5 31974510 31974844 -167655306 + MER41B-int LTR ERV1 2867 3194 -4343 1829 139 34 4 chr5 31974844 31975111 -167655039 + AluSx SINE Alu 2 276 -36 4341 131 53 36 chr5 31975111 31975324 -167654826 + MER41B-int LTR ERV1 3194 3402 -4135 2086 136 3 16 chr5 31975324 31975460 -167654690 + AluSx SINE Alu 1 137 -175 2269 107 0 7 chr5 31975460 31975760 -167654390 + AluSc SINE Alu 1 298 -11 2086 136 3 16 chr5 31975760 31975932 -167654218 + AluSx SINE Alu 137 305 -7 2198 116 3 0 chr5 31975932 31976224 -167653926 + AluSc SINE Alu 1 293 -16 4341 131 53 36 chr5 31976224 31976432 -167653718 + MER41B-int LTR ERV1 3401 3637 -3900 726 94 31 94 chr5 31976420 31976476 -167653674 + MER41B-int LTR ERV1 3300 3358 -2588 * 676 19 65 0 chr5 31976476 31976584 -167653566 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 2329 62 0 21 chr5 31976584 31976872 -167653278 - AluY SINE Alu -25 286 5 726 94 31 94 chr5 31976872 31976973 -167653177 + MER41B-int LTR ERV1 3356 3448 -2498 4669 108 18 5 chr5 31976977 31976997 -167653153 + MER41B-int LTR ERV1 2415 2433 -3513 2340 102 0 6 chr5 31976997 31977310 -167652840 - AluSq SINE Alu -2 311 1 4669 108 18 5 chr5 31977310 31978007 -167652143 + MER41B-int LTR ERV1 2433 4752 -1194 4919 86 8 24 chr5 31978012 31978714 -167651436 + MER41B-int LTR ERV1 5256 5946 0 4227 134 32 3 chr5 31978714 31979331 -167650819 + MER41B LTR ERV1 1 635 0 436 213 65 101 chr5 31979809 31979978 -167650172 - MER102b DNA MER1_type -10 331 169 2130 136 3 0 chr5 31979980 31980288 -167649862 - AluSx SINE Alu -3 309 1 2159 125 10 0 chr5 31980611 31980914 -167649236 + AluSx SINE Alu 1 306 -6 1577 137 15 8 chr5 31981217 31981479 -167648671 - AluSq SINE Alu -49 264 1 713 210 130 132 chr5 31981480 31982019 -167648131 + MER45C DNA AcHobo 96 633 -320 304 192 0 0 chr5 31982015 31982067 -167648083 + MER45C DNA AcHobo 900 951 -2 * 454 225 80 112 chr5 31982083 31982192 -167647958 + MIR SINE MIR 78 180 -82 3329 60 17 70 chr5 31982192 31982227 -167647923 - MLT2A1 LTR ERVL 0 444 409 396 59 0 0 chr5 31982227 31982278 -167647872 + (TA)n Simple_repeat Simple_repeat 1 51 0 3329 60 17 70 chr5 31982278 31982711 -167647439 - MLT2A1 LTR ERVL -35 409 1 454 225 80 112 chr5 31982711 31982788 -167647362 + MIR SINE MIR 180 258 -4 2377 100 0 0 chr5 31982967 31983277 -167646873 - AluY SINE Alu -1 310 1 1875 147 3 46 chr5 31983279 31983585 -167646565 - AluJb SINE Alu -19 293 1 6805 179 95 32 chr5 31983727 31985187 -167644963 - MER52A LTR ERV1 0 1755 204 269 220 0 0 chr5 31985544 31985603 -167644547 - MER52A LTR ERV1 -1696 59 1 1416 161 22 86 chr5 31985687 31985768 -167644382 + MLT1A1 LTR MaLR 1 86 -310 2263 63 70 0 chr5 31985768 31986054 -167644096 + AluSq SINE Alu 1 306 -7 1416 161 22 86 chr5 31986054 31986193 -167643957 + MLT1A1 LTR MaLR 86 231 -165 3663 92 4 48 chr5 31986193 31986632 -167643518 - LOR1a LTR ERV1 0 497 83 1871 137 3 48 chr5 31986632 31986947 -167643203 + AluJb SINE Alu 9 309 -3 3663 92 4 48 chr5 31986947 31987027 -167643123 - LOR1a LTR ERV1 -414 83 1 1416 161 22 86 chr5 31987027 31987135 -167643015 + MLT1A1 LTR MaLR 231 344 -52 1787 98 0 12 chr5 31987235 31987480 -167642670 - AluSq SINE Alu -71 242 1 850 170 157 0 chr5 31987569 31987728 -167642422 + MER8 DNA MER2_type 1 184 -55 25 51 0 0 chr5 31988221 31988260 -167641890 + AT_rich Low_complexity Low_complexity 1 39 0 435 108 40 14 chr5 31988562 31988636 -167641514 + L1PB3 LINE L1 6070 6145 -9 501 153 194 14 chr5 31988848 31988992 -167641158 + MER104 DNA Tc2 6 175 -5 692 129 86 9 chr5 31989127 31989243 -167640907 + FLAM_C SINE Alu 1 125 -8 594 173 40 1 chr5 31990387 31990502 -167639648 - L1MB7 LINE L1 -242 5942 5825 832 155 0 0 chr5 31990890 31991006 -167639144 - AluJo/FRAM SINE Alu -16 296 181 373 172 0 0 chr5 31991008 31991066 -167639084 + AluJo/FRAM SINE Alu 192 249 -53 817 163 71 0 chr5 31991068 31991209 -167638941 - AluJo SINE Alu -143 169 19 1023 169 23 23 chr5 31992211 31992383 -167637767 - FAM SINE Alu 0 175 4 1393 174 28 56 chr5 31992398 31992481 -167637669 - AluJo SINE Alu -12 300 216 2205 107 0 3 chr5 31992481 31992821 -167637329 + AluSq SINE Alu 1 339 0 1393 174 28 56 chr5 31992821 31993023 -167637127 - AluJo SINE Alu -96 216 21 268 146 0 0 chr5 31993023 31993064 -167637086 - AluJo SINE Alu -267 41 1 298 207 52 17 chr5 31993236 31993294 -167636856 - MIR SINE MIR -109 99 40 253 240 93 13 chr5 31993492 31993567 -167636583 + L1ME LINE L1 5515 5595 -526 1993 122 22 4 chr5 31993587 31993865 -167636285 - AluSp SINE Alu -30 283 1 411 294 15 15 chr5 31994051 31994187 -167635963 - MIR SINE MIR -1 261 126 982 217 157 5 chr5 31994776 31994815 -167635335 - L1MB5 LINE L1 -1 6183 6151 306 0 0 0 chr5 31994815 31994849 -167635301 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1665 191 0 20 chr5 31994853 31995147 -167635003 + AluJb SINE Alu 1 288 -24 982 217 157 5 chr5 31995147 31995417 -167634733 - L1MB5 LINE L1 -35 6149 5838 856 167 8 0 chr5 31995423 31995555 -167634595 - FLAM_A SINE Alu 0 133 1 399 21 0 0 chr5 31995640 31995688 -167634462 + (GA)n Simple_repeat Simple_repeat 1 48 0 228 67 0 0 chr5 31995696 31995726 -167634424 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 1604 191 0 24 chr5 31995726 31996006 -167634144 - AluJo SINE Alu -37 275 1 1611 213 0 0 chr5 31996417 31996708 -167633442 + AluJo SINE Alu 1 291 -21 649 151 134 0 chr5 31997627 31997746 -167632404 + L1MC1 LINE L1 6138 6272 -61 677 181 8 24 chr5 31997748 31997875 -167632275 + Tigger2a DNA MER2_type 3 127 -307 2105 144 0 6 chr5 31997880 31998192 -167631958 + AluSx SINE Alu 1 310 -2 2056 125 0 0 chr5 31998442 31998722 -167631428 + AluSg SINE Alu 1 280 -30 2000 125 11 0 chr5 31999553 31999869 -167630281 + AluSx SINE Alu 1 319 0 204 97 0 0 chr5 32000030 32000061 -167630089 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 301 291 103 41 chr5 32000249 32000619 -167629531 + L1M4 LINE L1 3580 3977 -2169 1602 172 15 4 chr5 32000857 32001125 -167629025 - AluJb SINE Alu -30 282 12 2248 86 7 7 chr5 32001177 32001469 -167628681 - AluSg SINE Alu -16 294 3 1467 117 162 23 chr5 32001695 32001961 -167628189 + AluSg SINE Alu 2 304 -6 994 145 52 17 chr5 32002050 32002222 -167627928 + AluSx SINE Alu 2 179 -133 1429 174 51 0 chr5 32002324 32002577 -167627573 + L1MB7 LINE L1 5919 6184 0 1501 151 37 74 chr5 32002633 32002957 -167627193 - AluJb SINE Alu 0 312 1 21 36 0 0 chr5 32002976 32003004 -167627146 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 32003642 32003668 -167626482 + AT_rich Low_complexity Low_complexity 1 26 0 451 243 42 13 chr5 32003862 32004052 -167626098 + MIR SINE MIR 13 262 0 750 233 157 38 chr5 32004662 32004949 -167625201 + L1MD2 LINE L1 5899 6219 -140 1928 134 30 13 chr5 32005494 32005792 -167624358 + AluSx SINE Alu 1 303 -9 1187 173 25 38 chr5 32006293 32006530 -167623620 + AluJo SINE Alu 1 234 -78 741 187 0 0 chr5 32006530 32006653 -167623497 + FLAM_C SINE Alu 15 137 -6 2078 218 127 17 chr5 32006653 32007180 -167622970 + L1MB7 LINE L1 5576 6160 -24 2309 89 20 3 chr5 32007435 32007739 -167622411 - AluSg SINE Alu -1 309 1 1436 97 116 5 chr5 32007984 32008191 -167621959 + MER30 DNA MER1_type 1 230 0 1216 172 161 0 chr5 32008200 32008467 -167621683 - AluJb SINE Alu -2 310 1 26 30 0 0 chr5 32008476 32008509 -167621641 + AT_rich Low_complexity Low_complexity 1 33 0 31 26 0 0 chr5 32008685 32008723 -167621427 + AT_rich Low_complexity Low_complexity 1 38 0 1935 64 113 0 chr5 32008763 32009029 -167621121 - AluY SINE Alu -15 296 1 2047 138 10 0 chr5 32009034 32009332 -167620818 - AluSx SINE Alu -11 301 1 376 284 55 28 chr5 32009391 32009609 -167620541 + L1MC/D LINE L1 4724 4947 -1199 2189 120 0 0 chr5 32009842 32010142 -167620008 + AluSx SINE Alu 1 300 -12 1305 138 146 16 chr5 32010152 32010406 -167619744 + AluJb SINE Alu 1 287 -25 306 326 107 67 chr5 32010482 32010689 -167619461 + L1MC/D LINE L1 5509 5731 -2077 2505 48 0 23 chr5 32010689 32010999 -167619151 + AluY SINE Alu 1 303 -8 306 326 107 67 chr5 32010999 32011061 -167619089 + L1MC/D LINE L1 5731 5789 -2019 953 132 220 0 chr5 32013302 32013484 -167616666 + MER46A DNA MER2_type 15 236 0 1937 134 17 10 chr5 32013595 32013886 -167616264 + AluJb SINE Alu 1 293 -19 236 273 133 35 chr5 32013893 32014036 -167616114 - MIR SINE MIR -6 256 100 1621 175 30 10 chr5 32014339 32014642 -167615508 - AluJo SINE Alu -3 309 1 1855 129 7 11 chr5 32014645 32014925 -167615225 - AluSx SINE Alu -13 299 21 2291 90 10 3 chr5 32015123 32015424 -167614726 + AluSq SINE Alu 1 303 -10 229 272 44 110 chr5 32015463 32015526 -167614624 - MER5A DNA MER1_type 0 189 138 809 174 8 0 chr5 32015526 32015647 -167614503 + FLAM_C SINE Alu 1 122 -11 229 272 44 110 chr5 32015647 32015719 -167614431 - MER5A DNA MER1_type -51 138 63 270 239 37 83 chr5 32015939 32016048 -167614102 - L1MC4a LINE L1 -1875 5933 5830 425 121 30 0 chr5 32016119 32016184 -167613966 + AluSp/q SINE Alu 232 298 -15 497 175 25 0 chr5 32016184 32016264 -167613886 + AluS SINE Alu 1 82 -230 2568 49 0 16 chr5 32016557 32016865 -167613285 + AluY SINE Alu 1 303 -8 372 152 0 0 chr5 32016929 32016995 -167613155 + (CA)n Simple_repeat Simple_repeat 2 67 0 672 254 112 9 chr5 32017030 32017262 -167612888 - MIR SINE MIR -5 257 2 210 287 176 9 chr5 32017968 32018076 -167612074 + L2 LINE L2 3182 3307 -6 423 281 132 38 chr5 32018099 32018334 -167611816 - MIR SINE MIR 0 262 6 2199 121 3 0 chr5 32018682 32018980 -167611170 + AluSx SINE Alu 1 299 -13 1867 132 57 10 chr5 32019498 32019794 -167610356 + AluSx SINE Alu 1 310 -2 221 0 0 33 chr5 32019836 32019866 -167610284 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2272 86 0 23 chr5 32020326 32020628 -167609522 + AluSg SINE Alu 1 295 -15 253 278 6 107 chr5 32020995 32021164 -167608986 - MIR SINE MIR 0 262 111 198 0 0 0 chr5 32021737 32021759 -167608391 + (A)n Simple_repeat Simple_repeat 1 22 0 2139 93 4 4 chr5 32021928 32022210 -167607940 + AluSc SINE Alu 1 279 -30 187 43 0 0 chr5 32022210 32022233 -167607917 + (GAAAA)n Simple_repeat Simple_repeat 2 115 0 2183 92 7 0 chr5 32022978 32023272 -167606878 - AluSg SINE Alu -14 296 1 222 254 0 153 chr5 32023439 32023509 -167606641 + L2 LINE L2 3214 3260 -53 2378 67 3 0 chr5 32023509 32023806 -167606344 + AluSp SINE Alu 1 298 -15 222 254 0 153 chr5 32023806 32023853 -167606297 + L2 LINE L2 3260 3313 0 552 276 145 41 chr5 32024063 32024284 -167605866 + MIR SINE MIR 19 262 0 354 259 69 74 chr5 32024540 32024729 -167605421 + MIR3 SINE MIR 10 197 -11 281 237 53 26 chr5 32024907 32025021 -167605129 + L1ME4a LINE L1 5843 5959 -162 2225 97 0 0 chr5 32025929 32026227 -167603923 + AluSg SINE Alu 1 298 -12 2216 88 0 14 chr5 32026493 32026790 -167603360 - AluSc SINE Alu -16 293 1 6218 104 42 47 chr5 32027214 32027550 -167602600 + L1MA3 LINE L1 5101 5437 -868 896 56 0 0 chr5 32027550 32027657 -167602493 + U6 snRNA snRNA 1 107 0 6218 104 42 47 chr5 32027657 32027921 -167602229 + L1MA3 LINE L1 5437 5701 -604 1518 186 45 3 chr5 32027921 32028211 -167601939 + AluJo SINE Alu 1 302 -10 6218 104 42 47 chr5 32028211 32028758 -167601392 + L1MA3 LINE L1 5701 6247 -58 2044 87 62 3 chr5 32028758 32029046 -167601104 - AluSx SINE Alu -7 305 1 6218 104 42 47 chr5 32029046 32029100 -167601050 + L1MA3 LINE L1 6247 6300 -5 970 265 191 28 chr5 32029509 32029990 -167600160 + L2 LINE L2 2749 3312 -1 29 70 0 0 chr5 32030586 32030643 -167599507 + GC_rich Low_complexity Low_complexity 1 57 0 2178 89 0 49 chr5 32031344 32031524 -167598626 - AluSq SINE Alu -3 310 123 315 0 0 0 chr5 32031524 32031559 -167598591 + (TG)n Simple_repeat Simple_repeat 2 36 0 1989 91 0 0 chr5 32031559 32031822 -167598328 - AluSg SINE Alu -42 268 6 2178 89 0 49 chr5 32031822 32031966 -167598184 - AluSq SINE Alu -188 125 1 1843 135 20 3 chr5 32032132 32032436 -167597714 + AluSx SINE Alu 3 311 -1 2259 83 10 0 chr5 32033191 32033493 -167596657 + AluSp SINE Alu 1 305 -8 1927 145 0 19 chr5 32033674 32033991 -167596159 + AluJo SINE Alu 1 311 -1 2052 115 6 10 chr5 32034341 32034653 -167595497 + AluSx SINE Alu 1 311 -1 3050 164 66 22 chr5 32034665 32034847 -167595303 - L1MB7 LINE L1 -22 6162 5989 2179 107 7 0 chr5 32034847 32035157 -167594993 - AluSx SINE Alu 0 312 1 3050 164 66 22 chr5 32035157 32035564 -167594586 - L1MB7 LINE L1 -195 5989 5547 180 312 52 13 chr5 32035795 32035872 -167594278 - MIR SINE MIR -58 204 125 1826 125 14 7 chr5 32036270 32036565 -167593585 - AluSx SINE Alu -10 302 6 265 309 24 0 chr5 32036566 32036650 -167593500 + L2 LINE L2 3228 3313 0 23 0 0 0 chr5 32036748 32036771 -167593379 + AT_rich Low_complexity Low_complexity 1 23 0 184 231 58 115 chr5 32036782 32036886 -167593264 + MER5A DNA MER1_type 92 189 0 1925 99 0 34 chr5 32037069 32037391 -167592759 - AluSx SINE Alu 0 312 1 365 261 0 11 chr5 32038235 32038323 -167591827 + MER5A DNA MER1_type 9 95 -94 346 315 123 0 chr5 32038439 32038569 -167591581 - MER5A DNA MER1_type -7 182 37 2071 129 0 0 chr5 32040358 32040660 -167589490 + AluSx SINE Alu 1 302 -10 276 30 0 0 chr5 32041047 32041080 -167589070 + (CA)n Simple_repeat Simple_repeat 2 34 0 1477 162 219 70 chr5 32041475 32041525 -167588625 - MLT1C LTR MaLR -6 461 420 3173 95 89 42 chr5 32041525 32042028 -167588122 - MER1A DNA MER1_type 0 527 1 1477 162 219 70 chr5 32042028 32042047 -167588103 - MLT1C LTR MaLR -47 420 405 1572 103 5 5 chr5 32042047 32042271 -167587879 - AluSq SINE Alu -4 309 86 1477 162 219 70 chr5 32042271 32042601 -167587549 - MLT1C LTR MaLR -62 405 1 2077 114 7 0 chr5 32042749 32043047 -167587103 - AluSp SINE Alu -13 300 1 886 122 8 8 chr5 32043143 32043274 -167586876 + FLAM_C SINE Alu 1 131 -2 306 312 100 30 chr5 32043401 32043568 -167586582 + MLT1L LTR MaLR 203 392 -223 1886 83 23 11 chr5 32043568 32043832 -167586318 - AluSx SINE Alu -11 301 35 306 312 100 30 chr5 32043832 32043895 -167586255 + MLT1L LTR MaLR 392 449 -166 1934 177 126 19 chr5 32043918 32044348 -167585802 + MLT1D LTR MaLR 30 505 0 278 271 15 68 chr5 32044362 32044495 -167585655 + MLT1L LTR MaLR 489 614 -1 2098 103 31 0 chr5 32044572 32044862 -167585288 - AluSq SINE Alu -14 299 1 381 259 83 24 chr5 32045014 32045249 -167584901 - MLT1J LTR MaLR -164 347 42 1900 139 13 10 chr5 32045464 32045766 -167584384 + AluJb SINE Alu 1 303 -9 503 304 58 12 chr5 32046391 32046562 -167583588 + MIR3 SINE MIR 22 200 -8 1125 167 142 0 chr5 32046901 32047141 -167583009 + AluJb SINE Alu 35 308 -4 2378 79 0 0 chr5 32047321 32047625 -167582525 + AluSg SINE Alu 2 305 -5 1743 140 0 42 chr5 32047825 32047992 -167582158 - AluJb SINE Alu -18 294 121 183 42 0 0 chr5 32047992 32048016 -167582134 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1595 118 68 54 chr5 32048016 32048296 -167581854 - AluSx SINE Alu -28 284 1 1743 140 0 42 chr5 32048296 32048434 -167581716 - AluJb SINE Alu -189 123 1 1581 180 42 67 chr5 32048705 32049154 -167580996 + LTR37B LTR ERV1 15 452 -16 195 129 0 0 chr5 32049168 32049199 -167580951 + (A)n Simple_repeat Simple_repeat 1 31 0 2280 82 0 20 chr5 32049240 32049545 -167580605 - AluSx SINE Alu -13 299 1 1832 183 49 9 chr5 32049567 32049895 -167580255 - MLT1A1 LTR MaLR -2 363 23 255 149 0 0 chr5 32049894 32049941 -167580209 + AluSp/q SINE Alu 253 299 -4 * 338 200 32 74 chr5 32049942 32050037 -167580113 - L1MC4 LINE L1 -1339 6703 6613 313 189 0 0 chr5 32050059 32050112 -167580038 + AluY SINE Alu 123 175 -126 737 174 49 7 chr5 32050113 32050257 -167579893 + AluJb SINE Alu 145 294 -18 731 305 120 19 chr5 32050278 32050692 -167579458 - L2 LINE L2 -66 3247 2797 25 0 0 0 chr5 32050760 32050785 -167579365 + AT_rich Low_complexity Low_complexity 1 25 0 1814 160 0 3 chr5 32050785 32051078 -167579072 - AluJb SINE Alu -20 292 1 1776 149 57 30 chr5 32051112 32051481 -167578669 - L1MD3 LINE L1 -81 7914 7536 2293 57 10 7 chr5 32051646 32051945 -167578205 - AluY SINE Alu -10 301 2 2054 106 0 10 chr5 32052028 32052321 -167577829 + AluSx SINE Alu 5 294 -18 340 298 100 35 chr5 32052510 32052763 -167577387 - L2 LINE L2 -247 3025 2760 306 271 89 94 chr5 32053089 32053239 -167576911 + L2 LINE L2 2067 2216 -1098 246 62 0 0 chr5 32053239 32053271 -167576879 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2014 116 0 0 chr5 32053273 32053557 -167576593 - AluSx SINE Alu -28 284 1 306 271 89 94 chr5 32053557 32053698 -167576452 + L2 LINE L2 2217 2357 -957 2352 73 0 3 chr5 32053698 32054000 -167576150 + AluY SINE Alu 1 301 -10 306 271 89 94 chr5 32054000 32054140 -167576010 + L2 LINE L2 2357 2500 -814 940 183 0 0 chr5 32054166 32054335 -167575815 - AluJ SINE Alu -15 297 129 683 149 9 0 chr5 32055710 32055817 -167574333 - AluJ SINE Alu -165 147 40 2146 123 0 0 chr5 32056093 32056401 -167573749 + AluSq SINE Alu 1 308 -5 1093 167 6 0 chr5 32056859 32057033 -167573117 - FAM SINE Alu 0 175 1 4846 169 11 25 chr5 32057163 32058020 -167572130 - L1MB7 LINE L1 0 6184 5317 5455 113 34 1 chr5 32058020 32058206 -167571944 - L1PA16 LINE L1 -4 6162 5984 1483 175 13 50 chr5 32058206 32058509 -167571641 + AluJo SINE Alu 11 302 -10 5455 113 34 1 chr5 32058509 32059327 -167570823 - L1PA16 LINE L1 -182 5984 5144 279 0 0 0 chr5 32059327 32059358 -167570792 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5455 113 34 1 chr5 32059358 32059840 -167570310 - L1PA16 LINE L1 -1022 5144 4679 4846 169 11 25 chr5 32059840 32059921 -167570229 - L1MB7 LINE L1 -867 5317 5259 1765 137 27 7 chr5 32060094 32060386 -167569764 - AluJb SINE Alu -4 308 11 294 148 111 0 chr5 32060509 32060563 -167569587 + MER94 DNA DNA 1 60 -74 2113 120 0 3 chr5 32060564 32060872 -167569278 + AluSq SINE Alu 1 307 -6 7971 15 0 0 chr5 32061330 32062649 -167567501 + L1PA3 LINE L1 4854 6172 0 345 293 85 48 chr5 32063204 32063474 -167566676 - ERVL LTR ERVL -477 5287 5008 1507 169 3 77 chr5 32063544 32063909 -167566241 + AluSx SINE Alu 1 312 0 1873 307 148 29 chr5 32064131 32064409 -167565741 - ERVL LTR ERVL -2540 3224 2981 1527 227 0 0 chr5 32064409 32064713 -167565437 - AluJb SINE Alu -8 304 1 1873 307 148 29 chr5 32064713 32065613 -167564537 - ERVL LTR ERVL -2783 2981 1905 375 304 87 7 chr5 32066668 32066806 -167563344 + MIR SINE MIR 2 150 -112 281 232 116 80 chr5 32067074 32067212 -167562938 + LTR33A LTR ERVL 10 152 -371 495 239 102 18 chr5 32067377 32067544 -167562606 + LTR33A LTR ERVL 343 523 0 441 192 88 110 chr5 32067606 32067668 -167562482 - MER5B DNA MER1_type 0 178 116 1481 165 3 58 chr5 32067668 32067960 -167562190 + AluJo SINE Alu 1 275 -37 297 0 0 0 chr5 32067960 32067993 -167562157 + (CA)n Simple_repeat Simple_repeat 1 33 0 1481 165 3 58 chr5 32067993 32068027 -167562123 + AluJo SINE Alu 275 309 -3 441 192 88 110 chr5 32068027 32068146 -167562004 - MER5B DNA MER1_type -62 116 1 1843 129 36 0 chr5 32068161 32068441 -167561709 - AluJb SINE Alu -22 290 1 2149 113 3 0 chr5 32069561 32069861 -167560289 - AluSx SINE Alu -11 301 1 411 285 166 25 chr5 32070217 32070393 -167559757 - MLT1L LTR MaLR -69 546 396 2724 150 12 5 chr5 32070393 32070814 -167559336 + MER61B LTR ERV1 1 424 -1 411 285 166 25 chr5 32070814 32070963 -167559187 - MLT1L LTR MaLR -219 396 175 885 141 21 115 chr5 32070994 32071064 -167559086 + MER5A DNA MER1_type 17 92 -97 1599 131 96 4 chr5 32071064 32071324 -167558826 + AluSx SINE Alu 11 294 -18 885 141 21 115 chr5 32071324 32071444 -167558706 + MER5A DNA MER1_type 92 189 0 332 283 192 17 chr5 32071561 32071738 -167558412 + L2 LINE L2 3106 3313 0 1174 290 84 46 chr5 32072222 32072767 -167557383 - MLT1K LTR MaLR -19 569 4 2964 144 16 48 chr5 32073773 32074208 -167555942 - MER41E LTR ERV1 0 512 64 2183 104 0 0 chr5 32074208 32074506 -167555644 - AluSg SINE Alu -12 298 1 2964 144 16 48 chr5 32074506 32074545 -167555605 - MER41E LTR ERV1 -448 64 54 2329 94 3 0 chr5 32074545 32074854 -167555296 - AluSg SINE Alu 0 310 1 2964 144 16 48 chr5 32074854 32074893 -167555257 - MER41E LTR ERV1 -458 54 15 1843 85 3 120 chr5 32075545 32075887 -167554263 - AluSg1 SINE Alu -7 302 1 277 273 45 45 chr5 32076203 32076291 -167553859 + MER91B DNA MER1_type 100 187 -3 545 248 126 30 chr5 32077179 32077377 -167552773 - LTR40a LTR ERVL -118 401 185 2126 102 7 0 chr5 32077377 32077682 -167552468 - AluSx SINE Alu -3 309 3 3907 126 24 8 chr5 32077703 32078297 -167551853 - LTR9B LTR ERV1 0 644 42 1843 137 23 13 chr5 32078517 32078824 -167551326 + AluSx SINE Alu 1 310 -2 356 268 44 68 chr5 32079388 32079593 -167550557 + HAL1b LINE L1 709 908 -440 481 219 1 32 chr5 32079709 32079833 -167550317 + HAL1b LINE L1 849 2357 -150 1931 133 7 0 chr5 32079967 32080261 -167549889 - AluSx SINE Alu -16 296 1 1342 184 20 47 chr5 32080263 32080562 -167549588 - AluJo SINE Alu -21 291 1 3085 155 41 24 chr5 32080700 32081241 -167548909 - MER21A LTR ERV1 -6 925 376 313 164 49 33 chr5 32081246 32081307 -167548843 - MER21A LTR ERV1 -667 264 203 2018 107 0 7 chr5 32081318 32081607 -167548543 + AluSx SINE Alu 1 287 -25 232 325 123 0 chr5 32081736 32081890 -167548260 + L2 LINE L2 2453 2625 -689 817 250 18 0 chr5 32082336 32082504 -167547646 + MER45A DNA AcHobo 8 178 0 2108 95 3 20 chr5 32082630 32082936 -167547214 - AluSg SINE Alu -9 301 1 1016 254 60 80 chr5 32083052 32083465 -167546685 + LTR16C LTR ERVL 87 491 0 2092 107 7 13 chr5 32083761 32083933 -167546217 - AluSx SINE Alu -5 307 136 2256 92 0 7 chr5 32083933 32084239 -167545911 - AluSg SINE Alu -6 304 1 2092 107 7 13 chr5 32084239 32084375 -167545775 - AluSx SINE Alu -176 136 1 1126 254 95 44 chr5 32084407 32084817 -167545333 - MLT1J LTR MaLR -13 498 59 827 156 0 0 chr5 32084817 32084939 -167545211 + FLAM_A SINE Alu 1 122 -11 1126 254 95 44 chr5 32084939 32085001 -167545149 - MLT1J LTR MaLR -452 59 2 830 219 17 6 chr5 32085327 32085501 -167544649 + MLT1I LTR MaLR 1 176 -233 1614 172 44 51 chr5 32085501 32085966 -167544184 + MLT2D LTR ERVL 1 444 -20 211 176 0 39 chr5 32085966 32086017 -167544133 + (TCTCTG)n Simple_repeat Simple_repeat 3 51 0 234 217 0 0 chr5 32086027 32086073 -167544077 - Alu SINE Alu -8 294 249 564 15 0 0 chr5 32086084 32086149 -167544001 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 200 167 48 0 chr5 32086150 32086192 -167543958 + (CAGAGA)n Simple_repeat Simple_repeat 1 44 0 2596 127 3 8 chr5 32086194 32086580 -167543570 + MER50 LTR ERV1 328 711 -23 498 129 0 0 chr5 32086581 32086651 -167543499 - AluJ/FLAM SINE Alu -241 71 2 1949 132 10 3 chr5 32087472 32087775 -167542375 + AluSx SINE Alu 7 311 -1 296 260 106 19 chr5 32087775 32087879 -167542271 - MER5A DNA MER1_type -32 157 45 892 106 8 0 chr5 32088906 32089038 -167541112 + AluSq/x SINE Alu 1 133 -179 878 209 0 33 chr5 32089563 32089595 -167540555 - AluJb SINE Alu -1 311 279 231 61 0 0 chr5 32089595 32089628 -167540522 + (TA)n Simple_repeat Simple_repeat 2 34 0 878 209 0 33 chr5 32089628 32089777 -167540373 - AluJb SINE Alu -33 279 136 2010 133 0 7 chr5 32089858 32090159 -167539991 - AluSx SINE Alu -13 299 1 4786 176 22 106 chr5 32091059 32091551 -167538599 + L1MB3 LINE L1 3984 4516 -1667 277 148 229 0 chr5 32091551 32091612 -167538538 + AluJ/FRAM SINE Alu 223 297 -5 2100 111 3 3 chr5 32091617 32091924 -167538226 + AluSp SINE Alu 7 313 0 4786 176 22 106 chr5 32091924 32092322 -167537828 + L1MB3 LINE L1 4520 4950 -1233 2120 132 3 0 chr5 32092322 32092626 -167537524 + AluSx SINE Alu 1 305 -7 4786 176 22 106 chr5 32092626 32092933 -167537217 + L1MB3 LINE L1 4950 5281 -902 2181 126 0 0 chr5 32092933 32093243 -167536907 + AluSq SINE Alu 1 310 -3 4786 176 22 106 chr5 32093243 32093460 -167536690 + L1MB3 LINE L1 5281 5515 -668 1522 99 9 0 chr5 32093460 32093672 -167536478 + AluY SINE Alu 27 240 -71 4786 176 22 106 chr5 32093672 32093702 -167536448 + L1MB3 LINE L1 5515 5546 -637 1904 144 3 28 chr5 32093702 32094022 -167536128 + AluJb SINE Alu 1 312 0 4786 176 22 106 chr5 32094022 32094059 -167536091 + L1MB3 LINE L1 5546 5585 -598 1684 164 27 0 chr5 32094059 32094351 -167535799 + AluSx SINE Alu 1 300 -12 4786 176 22 106 chr5 32094351 32094620 -167535530 + L1MB3 LINE L1 5585 5875 -308 1908 121 6 42 chr5 32094620 32094933 -167535217 + AluSx SINE Alu 1 302 -10 4786 176 22 106 chr5 32094933 32095008 -167535142 + L1MB3 LINE L1 5875 5955 -228 1518 194 3 7 chr5 32095008 32095302 -167534848 - AluJb SINE Alu -19 293 1 4786 176 22 106 chr5 32095302 32095705 -167534445 + L1MB3 LINE L1 5955 6086 -97 1914 178 99 13 chr5 32095707 32096090 -167534060 + MLT2B2 LTR ERVL 1 416 -99 402 108 0 0 chr5 32096090 32096155 -167533995 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 2207 149 166 47 chr5 32096158 32096600 -167533550 - MLT2B3 LTR ERVL 0 554 45 1972 136 3 0 chr5 32096600 32096894 -167533256 - AluSx SINE Alu -15 297 3 2207 149 166 47 chr5 32096894 32096946 -167533204 - MLT2B3 LTR ERVL -509 45 1 311 146 0 0 chr5 32096949 32096997 -167533153 + MLT2B2 LTR ERVL 417 464 0 390 104 104 83 chr5 32096997 32097093 -167533057 + L1MB4 LINE L1 6083 6180 0 2085 89 4 0 chr5 32097441 32097768 -167532382 + AluY SINE Alu 1 328 0 23 0 0 0 chr5 32097768 32097791 -167532359 + AT_rich Low_complexity Low_complexity 1 23 0 1953 148 0 7 chr5 32098200 32098503 -167531647 + AluSx SINE Alu 1 301 -11 2065 120 0 3 chr5 32098555 32098856 -167531294 - AluSx SINE Alu -12 300 1 2218 116 17 59 chr5 32099837 32099923 -167530227 - L1MB3 LINE L1 -1 6182 6094 1587 178 10 7 chr5 32099923 32100232 -167529918 - AluJo SINE Alu -2 310 1 2218 116 17 59 chr5 32100232 32100377 -167529773 - L1MB3 LINE L1 -89 6094 5944 2083 118 3 3 chr5 32100377 32100683 -167529467 - AluSq SINE Alu -7 306 1 2218 116 17 59 chr5 32100683 32100856 -167529294 - L1MB3 LINE L1 -239 5944 5794 1937 123 0 23 chr5 32100867 32101167 -167528983 + AluJo SINE Alu 9 301 -11 2137 101 7 0 chr5 32101565 32101871 -167528279 - AluSx SINE Alu 0 312 5 30 45 0 0 chr5 32101898 32101942 -167528208 + AT_rich Low_complexity Low_complexity 1 44 0 2083 92 0 49 chr5 32102744 32103127 -167527023 - AluSx SINE Alu 0 367 1 270 296 148 0 chr5 32103695 32103837 -167526313 - MIR SINE MIR -9 253 91 1200 194 136 74 chr5 32103837 32104209 -167525941 + MLT1C LTR MaLR 2 441 -64 1932 131 7 14 chr5 32104209 32104500 -167525650 - AluSq SINE Alu -24 289 1 1200 194 136 74 chr5 32104500 32104547 -167525603 + MLT1C LTR MaLR 441 484 -21 230 234 0 0 chr5 32104565 32104612 -167525538 - MIR SINE MIR -168 94 48 266 108 0 0 chr5 32104884 32104921 -167525229 + MIR SINE MIR 94 130 -78 2162 105 0 7 chr5 32105017 32105313 -167524837 + AluSg SINE Alu 1 294 -16 743 133 9 0 chr5 32105313 32105426 -167524724 - L1PB3 LINE L1 -9 6145 6032 23 0 0 0 chr5 32105472 32105495 -167524655 + AT_rich Low_complexity Low_complexity 1 23 0 1974 125 10 6 chr5 32105587 32105898 -167524252 + AluJb SINE Alu 1 312 0 188 111 28 0 chr5 32106623 32106659 -167523491 + (TTA)n Simple_repeat Simple_repeat 2 38 0 245 62 0 0 chr5 32106904 32106936 -167523214 + L1MB7 LINE L1 6008 6039 -145 1912 93 47 47 chr5 32106994 32107294 -167522856 - AluSx SINE Alu -12 300 1 712 118 33 92 chr5 32107295 32107422 -167522728 + L1MB7 LINE L1 6022 6140 -44 1900 113 39 0 chr5 32107422 32107704 -167522446 - AluSc SINE Alu -16 293 1 712 118 33 92 chr5 32107704 32107729 -167522421 + L1MB7 LINE L1 6140 6165 -19 198 261 0 43 chr5 32107735 32107804 -167522346 - L2 LINE L2 0 3313 3248 394 325 65 6 chr5 32107806 32107975 -167522175 - MIR SINE MIR 0 262 84 2823 13 0 0 chr5 32108043 32108360 -167521790 - AluYb8 SINE Alu -1 317 1 402 196 10 49 chr5 32108513 32108615 -167521535 + MLT1J1 LTR MaLR 349 446 0 413 309 18 12 chr5 32108780 32108945 -167521205 - MLT1J LTR MaLR -31 480 315 734 96 0 80 chr5 32109107 32109232 -167520918 - FLAM_C SINE Alu -2 141 27 212 234 62 47 chr5 32109442 32109506 -167520644 - MIR SINE MIR -196 66 2 2200 187 51 26 chr5 32109569 32110062 -167520088 - MLT1D LTR MaLR 0 505 1 1781 116 3 88 chr5 32110388 32110707 -167519443 + AluSx SINE Alu 1 292 -20 293 231 19 48 chr5 32110860 32110964 -167519186 - MER96 DNA MER1_type? -74 101 1 889 158 6 12 chr5 32111199 32111363 -167518787 - AluJo SINE Alu -149 163 1 486 117 48 78 chr5 32111398 32111501 -167518649 + Tigger1 DNA MER2_type 30 129 -2289 1625 194 0 22 chr5 32111502 32111821 -167518329 - AluJb SINE Alu 0 312 1 757 181 0 28 chr5 32111821 32111965 -167518185 - AluJo SINE Alu -171 141 2 7466 107 56 99 chr5 32111965 32112600 -167517550 + Tigger1 DNA MER2_type 965 1626 -792 1552 178 51 4 chr5 32112600 32112876 -167517274 + AluJb SINE Alu 1 289 -23 7466 107 56 99 chr5 32112876 32113550 -167516600 + Tigger1 DNA MER2_type 1626 2328 -90 1859 147 0 0 chr5 32113550 32113836 -167516314 - AluSx SINE Alu -26 286 1 7466 107 56 99 chr5 32113836 32113954 -167516196 + Tigger1 DNA MER2_type 2328 2333 -85 2058 125 0 0 chr5 32113954 32114251 -167515899 - AluSx SINE Alu -15 297 1 2238 113 17 59 chr5 32115231 32115317 -167514833 - L1MB3 LINE L1 -1 6182 6094 1587 178 10 7 chr5 32115317 32115626 -167514524 - AluJo SINE Alu -2 310 1 2238 113 17 59 chr5 32115626 32115771 -167514379 - L1MB3 LINE L1 -89 6094 5944 2027 120 3 3 chr5 32115771 32116070 -167514080 - AluSq SINE Alu -14 299 1 2238 113 17 59 chr5 32116070 32116243 -167513907 - L1MB3 LINE L1 -239 5944 5794 1943 124 0 20 chr5 32116254 32116553 -167513597 + AluJo SINE Alu 9 301 -11 2107 105 7 0 chr5 32116940 32117244 -167512906 - AluSx SINE Alu -2 310 5 2092 102 7 0 chr5 32117302 32117597 -167512553 - AluSq SINE Alu -16 297 1 820 113 14 50 chr5 32117799 32117940 -167512210 - AluJb SINE Alu -175 137 2 2006 118 7 3 chr5 32118496 32118793 -167511357 - AluSx SINE Alu -8 304 7 247 129 188 82 chr5 32118953 32119038 -167511112 + MLT1F1 LTR MaLR 435 528 -39 289 302 245 0 chr5 32119796 32119902 -167510248 - L2 LINE L2 0 3272 3141 1808 119 31 3 chr5 32119983 32120277 -167509873 + AluSq SINE Alu 1 302 -11 200 326 149 0 chr5 32120425 32120600 -167509550 - L2 LINE L2 -337 2977 2777 1956 159 0 0 chr5 32120602 32120911 -167509239 - AluSx SINE Alu -3 309 1 957 204 35 10 chr5 32120936 32121137 -167509013 - AluJo SINE Alu -6 306 101 1717 151 3 57 chr5 32121138 32121455 -167508695 - AluJb SINE Alu -11 301 2 1253 291 132 14 chr5 32121527 32122019 -167508131 - L2 LINE L2 -654 2660 2111 578 264 8 78 chr5 32122467 32122725 -167507425 - L1MC5 LINE L1 -26 7935 7696 706 206 15 0 chr5 32122729 32122860 -167507290 - FLAM_A SINE Alu 0 133 1 1878 121 11 0 chr5 32122956 32123268 -167506882 + AluSx SINE Alu 1 315 0 2073 127 29 19 chr5 32123268 32123636 -167506514 + L1MB1 LINE L1 5792 6167 -1 2338 94 0 0 chr5 32123663 32123972 -167506178 + AluSq SINE Alu 1 309 -4 931 215 51 14 chr5 32124291 32124505 -167505645 + MIR SINE MIR 41 262 0 251 303 41 25 chr5 32125266 32125388 -167504762 + LTR67 LTR ERVL 428 551 -6 560 178 10 0 chr5 32126042 32126143 -167504007 + MLT1A2 LTR MaLR 1 102 -272 691 193 37 15 chr5 32126149 32126284 -167503866 + MLT1A2 LTR MaLR 236 373 -1 541 259 222 32 chr5 32126285 32126632 -167503518 + MLT1L LTR MaLR 30 442 -173 241 262 47 28 chr5 32126660 32126767 -167503383 + MLT1L LTR MaLR 507 615 0 542 252 8 0 chr5 32126891 32127010 -167503140 + MIR SINE MIR 13 132 -130 2283 95 0 3 chr5 32127034 32127319 -167502831 - AluSq SINE Alu -29 284 1 266 216 14 14 chr5 32127343 32127417 -167502733 + MER20B DNA MER1_type 232 305 -478 399 210 25 50 chr5 32127417 32127536 -167502614 + MIR SINE MIR 143 258 -4 1357 71 6 0 chr5 32127659 32127828 -167502322 - AluSp SINE Alu -7 306 137 2085 120 43 0 chr5 32127830 32128129 -167502021 - AluSx SINE Alu 0 312 1 1486 263 34 15 chr5 32128497 32128907 -167501243 + MER20B DNA MER1_type 4 421 -362 871 80 9 0 chr5 32128930 32129042 -167501108 + AluSp SINE Alu 1 113 -200 2120 121 0 24 chr5 32129045 32129343 -167500807 - AluSq SINE Alu -22 291 1 1701 259 57 43 chr5 32129354 32129767 -167500383 - L1ME3A LINE L1 0 6170 5743 1747 154 47 70 chr5 32129767 32129809 -167500341 - THE1C LTR MaLR 0 375 334 2161 113 40 0 chr5 32129809 32130109 -167500041 + AluSx SINE Alu 1 312 0 1747 154 47 70 chr5 32130109 32130450 -167499700 - THE1C LTR MaLR -41 334 1 1701 259 57 43 chr5 32130450 32130689 -167499461 - L1ME3A LINE L1 -427 5743 5509 1159 149 67 37 chr5 32131421 32131747 -167498403 - MSTD LTR MaLR 0 396 16 208 282 115 63 chr5 32131795 32131969 -167498181 - MER5A DNA MER1_type -6 183 1 2380 158 58 27 chr5 32132661 32133002 -167497148 - MSTB LTR MaLR -1 425 96 1822 140 70 20 chr5 32133002 32133359 -167496791 + THE1C LTR MaLR 1 375 0 9683 120 18 65 chr5 32133361 32133685 -167496465 + THE1C-int LTR MaLR 3 341 -1239 1718 152 48 4 chr5 32133685 32133977 -167496173 - AluSx SINE Alu 0 304 1 9683 120 18 65 chr5 32133977 32134033 -167496117 + THE1C-int LTR MaLR 341 398 -1182 2143 138 0 3 chr5 32134033 32134338 -167495812 - AluSq SINE Alu -5 308 5 9683 120 18 65 chr5 32134338 32135612 -167494538 + THE1C-int LTR MaLR 398 1580 0 1911 130 82 25 chr5 32135612 32135967 -167494183 + THE1C LTR MaLR 1 375 0 2380 158 58 27 chr5 32135967 32136033 -167494117 - MSTB LTR MaLR -329 97 1 393 266 81 0 chr5 32136266 32136390 -167493760 + MIR3 SINE MIR 30 163 -45 488 194 153 14 chr5 32136404 32136548 -167493602 + MER104 DNA Tc2 14 177 -3 278 329 98 58 chr5 32136876 32137244 -167492906 - L2 LINE L2 -466 2848 2449 1750 160 9 38 chr5 32137244 32137563 -167492587 + AluJb SINE Alu 3 312 0 278 329 98 58 chr5 32137563 32137748 -167492402 - L2 LINE L2 -865 2449 2273 663 209 264 29 chr5 32137799 32138072 -167492078 + LTR33 LTR ERVL 15 351 -170 229 283 0 0 chr5 32138073 32138126 -167492024 + LTR33 LTR ERVL 468 520 -1 1993 124 3 39 chr5 32138791 32139097 -167491053 + AluSp SINE Alu 1 295 -18 1825 310 64 43 chr5 32139122 32140095 -167490055 + HERVL LTR ERVL 2979 3971 -1683 1636 197 124 50 chr5 32140097 32140239 -167489911 + MLT1D LTR MaLR 31 161 -344 2054 152 3 3 chr5 32140239 32140549 -167489601 - AluJo SINE Alu -2 310 1 1636 197 124 50 chr5 32140549 32140638 -167489512 + MLT1D LTR MaLR 161 242 -263 2050 82 56 4 chr5 32140638 32140946 -167489204 + AluSq SINE Alu 1 322 0 1636 197 124 50 chr5 32140946 32141027 -167489123 + MLT1D LTR MaLR 242 316 -189 2034 117 13 23 chr5 32141027 32141336 -167488814 - AluSx SINE Alu -6 306 1 1636 197 124 50 chr5 32141336 32141462 -167488688 + MLT1D LTR MaLR 316 505 0 364 281 10 10 chr5 32141462 32141558 -167488592 + HERVL LTR ERVL 4023 4118 -1646 430 191 0 0 chr5 32141565 32141633 -167488517 - U4 snRNA snRNA -77 68 1 2242 119 0 3 chr5 32141637 32141947 -167488203 - AluSx SINE Alu -3 309 1 739 118 27 0 chr5 32141967 32142077 -167488073 - AluJo SINE Alu -177 135 23 307 179 0 18 chr5 32142093 32142149 -167488001 + HERVL LTR ERVL 4107 4161 -1603 587 267 20 59 chr5 32142149 32142321 -167487829 - MIR SINE MIR -59 203 39 1037 173 34 29 chr5 32142321 32142529 -167487621 - MER3 DNA MER1_type 0 209 1 587 267 20 59 chr5 32142529 32142558 -167487592 - MIR SINE MIR -223 39 10 2066 134 7 0 chr5 32142987 32143278 -167486872 - AluJb SINE Alu -19 293 1 266 307 11 45 chr5 32143287 32143375 -167486775 - L2 LINE L2 -54 3218 3134 283 217 24 24 chr5 32143715 32143798 -167486352 + MIR SINE MIR 119 201 -61 2238 111 0 0 chr5 32143825 32144123 -167486027 - AluSx SINE Alu -14 298 1 186 344 102 23 chr5 32144151 32144279 -167485871 - L2 LINE L2 -623 2691 2554 1130 148 0 0 chr5 32144317 32144493 -167485657 + L1MB7 LINE L1 5623 5798 -386 1258 132 29 5 chr5 32144494 32144698 -167485452 + L1MB7 LINE L1 5850 6058 -126 766 223 48 31 chr5 32144698 32144927 -167485223 - MIR SINE MIR -27 235 3 338 288 198 37 chr5 32145237 32145712 -167484438 - L2 LINE L2 -1 3271 2729 2117 132 7 0 chr5 32145952 32146256 -167483894 + AluSx SINE Alu 1 306 -6 258 280 133 35 chr5 32146293 32146304 -167483846 - MIR SINE MIR -35 227 218 1950 151 3 13 chr5 32146304 32146602 -167483548 + AluJb SINE Alu 1 295 -17 258 280 133 35 chr5 32146602 32146733 -167483417 - MIR SINE MIR -44 218 71 2072 90 36 7 chr5 32147489 32147790 -167482360 - AluSg SINE Alu 0 310 1 595 254 211 25 chr5 32148100 32148455 -167481695 + L2 LINE L2 2854 3274 -39 22 35 0 0 chr5 32148861 32148890 -167481260 + GC_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr5 32148937 32148979 -167481171 + GC_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr5 32149331 32149360 -167480790 + GC_rich Low_complexity Low_complexity 1 29 0 183 42 0 0 chr5 32149538 32149562 -167480588 + (CGG)n Simple_repeat Simple_repeat 2 25 0 247 151 41 0 chr5 32149686 32149759 -167480391 + (CCCGG)n Simple_repeat Simple_repeat 2 77 0 704 120 77 8 chr5 32150759 32150876 -167479274 - FLAM_C SINE Alu -8 125 1 490 153 194 14 chr5 32151011 32151155 -167478995 - MER104 DNA Tc2 -5 175 6 419 95 40 14 chr5 32151367 32151441 -167478709 - L1PB3 LINE L1 -9 6145 6070 25 51 0 0 chr5 32151743 32151782 -167478368 + AT_rich Low_complexity Low_complexity 1 39 0 847 170 157 0 chr5 32152276 32152435 -167477715 - MER8 DNA MER2_type -55 184 1 2085 116 3 10 chr5 32152524 32152827 -167477323 + AluSx SINE Alu 1 301 -11 2365 95 3 0 chr5 32153130 32153435 -167476715 - AluSx SINE Alu -6 306 1 1035 160 12 0 chr5 32153973 32154142 -167476008 - FRAM SINE Alu -5 171 1 238 298 107 25 chr5 32154787 32154908 -167475242 + MIR SINE MIR 5 135 -127 2350 70 13 3 chr5 32155239 32155541 -167474609 + AluSp SINE Alu 1 305 -8 288 284 153 24 chr5 32155648 32156028 -167474122 + L1M4 LINE L1 4416 4844 -1302 194 284 0 108 chr5 32156482 32156556 -167473594 - L2 LINE L2 -89 3183 3118 244 235 29 15 chr5 32156738 32156806 -167473344 + MIR SINE MIR 29 97 -165 303 262 12 60 chr5 32156915 32156999 -167473151 - L1ME3A LINE L1 -66 6104 6025 548 221 15 23 chr5 32157058 32157189 -167472961 + FLAM_C SINE Alu 9 138 -5 234 262 16 0 chr5 32157196 32157257 -167472893 + MIR SINE MIR 201 262 0 206 245 0 20 chr5 32157294 32157343 -167472807 + L2 LINE L2 3217 3264 -8 2591 51 0 10 chr5 32157375 32157687 -167472463 + AluY SINE Alu 1 309 -2 307 242 121 20 chr5 32158473 32158572 -167471578 + MER46C DNA MER2_type 87 195 -143 1429 186 47 24 chr5 32158617 32158913 -167471237 + AluJb SINE Alu 1 303 -9 5021 170 82 44 chr5 32158944 32159744 -167470406 + Looper DNA T2_type 6 775 -783 1515 168 45 11 chr5 32159744 32160030 -167470120 - AluJb SINE Alu -14 298 3 5021 170 82 44 chr5 32160030 32160659 -167469491 + Looper DNA T2_type 775 1548 -10 1552 184 44 17 chr5 32160799 32161092 -167469058 + AluJb SINE Alu 1 301 -11 23 0 0 0 chr5 32161128 32161151 -167468999 + AT_rich Low_complexity Low_complexity 1 23 0 615 135 0 0 chr5 32161201 32161290 -167468860 + AluJo SINE Alu 1 89 -223 944 178 45 5 chr5 32161291 32161493 -167468657 + L1M3 LINE L1 5266 5475 -693 360 216 196 0 chr5 32161499 32161596 -167468554 - Looper DNA T2_type -164 1394 1279 248 258 65 0 chr5 32161578 32161640 -167468510 - AluJb SINE Alu -34 268 203 * 1086 178 41 5 chr5 32161640 32161837 -167468313 + AluJo SINE Alu 95 298 -14 586 210 96 38 chr5 32161839 32161996 -167468154 + AluJo/FRAM SINE Alu 137 302 0 1893 153 7 3 chr5 32162750 32163037 -167467113 - AluJb SINE Alu -24 288 1 598 283 95 24 chr5 32163112 32163725 -167466425 - L1MEd LINE L1 -4865 1254 706 1232 181 63 98 chr5 32163730 32164045 -167466105 - AluJo SINE Alu -8 304 1 548 130 190 0 chr5 32164166 32164266 -167465884 + MER46A DNA MER2_type 118 236 0 384 80 0 30 chr5 32164387 32164451 -167465699 - AluSq/x SINE Alu -156 147 97 2629 48 0 3 chr5 32164546 32164856 -167465294 + AluY SINE Alu 1 309 -2 200 310 14 14 chr5 32165130 32165201 -167464949 + MER5C DNA MER1_type 4 74 -250 797 207 6 30 chr5 32165245 32165409 -167464741 - AluJo/FRAM SINE Alu -19 293 134 2092 84 8 0 chr5 32165409 32165670 -167464480 - AluSx SINE Alu -16 296 34 4739 194 78 44 chr5 32165697 32166440 -167463710 - L1 LINE L1 -978 5168 4452 1127 163 202 31 chr5 32166440 32166698 -167463452 - AluJb SINE Alu 0 302 1 4739 194 78 44 chr5 32166698 32166916 -167463234 - L1 LINE L1 -1694 4452 4243 1882 152 0 13 chr5 32166916 32167218 -167462932 - AluSx SINE Alu -14 298 1 4739 194 78 44 chr5 32167218 32167552 -167462598 - L1 LINE L1 -1903 4243 3828 282 235 0 29 chr5 32167610 32167678 -167462472 + MIR SINE MIR 15 80 -182 952 193 293 7 chr5 32167904 32168011 -167462139 - Charlie1 DNA MER1_type -4 2757 2682 2196 101 10 3 chr5 32168011 32168308 -167461842 + AluSx SINE Alu 1 299 -13 952 193 293 7 chr5 32168308 32168592 -167461558 - Charlie1 DNA MER1_type -79 2682 1 276 279 34 62 chr5 32168610 32168789 -167461361 - HAL1 LINE L1 -109 2398 2225 2199 90 40 7 chr5 32169271 32169571 -167460579 - AluY SINE Alu -1 310 1 1117 232 216 31 chr5 32169652 32170199 -167459951 - HAL1 LINE L1 -590 1917 1270 33 0 0 0 chr5 32170462 32170495 -167459655 + AT_rich Low_complexity Low_complexity 1 33 0 1507 162 70 4 chr5 32170495 32170767 -167459383 - AluJo SINE Alu -22 290 1 1930 159 3 10 chr5 32171010 32171318 -167458832 - AluJo SINE Alu -6 306 1 379 211 53 32 chr5 32171471 32171566 -167458584 + MER94 DNA DNA 4 100 -34 480 204 0 0 chr5 32172120 32172208 -167457942 - L3 LINE CR1 -199 1378 1291 1022 149 36 59 chr5 32172996 32173217 -167456933 - MER20 DNA MER1_type 0 219 4 2243 122 0 0 chr5 32174195 32174491 -167455659 + AluSx SINE Alu 1 296 -16 24 53 0 0 chr5 32175449 32175487 -167454663 + AT_rich Low_complexity Low_complexity 1 38 0 2490 72 0 0 chr5 32175548 32175854 -167454296 - AluY SINE Alu -5 306 1 1281 59 0 0 chr5 32176765 32176918 -167453232 + L1PA5 LINE L1 6000 6152 -2 391 297 97 18 chr5 32176972 32177137 -167453013 + MIR3 SINE MIR 23 200 -8 2384 96 3 0 chr5 32177199 32177500 -167452650 - AluSp SINE Alu -11 302 1 186 261 148 0 chr5 32177601 32177689 -167452461 + MIR SINE MIR 42 142 -66 883 167 0 0 chr5 32177736 32177868 -167452282 + FRAM SINE Alu 34 165 -11 279 0 0 0 chr5 32178316 32178347 -167451803 + (CA)n Simple_repeat Simple_repeat 1 31 0 218 319 86 14 chr5 32179613 32179833 -167450317 - L2 LINE L2 -357 2915 2695 25 51 0 0 chr5 32180299 32180338 -167449812 + AT_rich Low_complexity Low_complexity 1 39 0 354 0 89 0 chr5 32180584 32180640 -167449510 + T-rich Low_complexity Low_complexity 1 61 0 2031 100 4 18 chr5 32180649 32180929 -167449221 - AluSx SINE Alu -36 276 1 2260 243 112 70 chr5 32180934 32181880 -167448270 - L1MC4 LINE L1 -15 8027 7019 1283 205 107 25 chr5 32181880 32182126 -167448024 + MER2 DNA MER2_type 1 280 -64 2123 135 0 0 chr5 32182126 32182422 -167447728 - AluSx SINE Alu -13 299 4 1283 205 107 25 chr5 32182422 32182492 -167447658 + MER2 DNA MER2_type 280 343 -1 2260 243 112 70 chr5 32182492 32182742 -167447408 - L1MC4 LINE L1 -1023 7019 6781 352 295 90 30 chr5 32182742 32182976 -167447174 - L1ME LINE L1 -303 5818 5571 1821 141 28 24 chr5 32183214 32183505 -167446645 - AluJb SINE Alu -20 292 1 1240 143 109 13 chr5 32183522 32183752 -167446398 - AluJb SINE Alu -3 309 58 778 129 245 22 chr5 32183838 32183977 -167446173 - AluJb SINE Alu -9 303 134 316 221 15 15 chr5 32184059 32184127 -167446023 - MER2 DNA MER2_type -1 344 277 404 149 15 15 chr5 32184130 32184197 -167445953 + AluS SINE Alu 4 70 -243 216 0 0 0 chr5 32185171 32185195 -167444955 + (T)n Simple_repeat Simple_repeat 1 24 0 23 33 0 0 chr5 32186405 32186435 -167443715 + AT_rich Low_complexity Low_complexity 1 30 0 248 145 0 16 chr5 32186544 32186606 -167443544 + (CAG)n Simple_repeat Simple_repeat 1 61 0 382 238 66 74 chr5 32188561 32188683 -167441467 + MIR3 SINE MIR 43 163 -45 180 100 33 0 chr5 32188737 32188767 -167441383 + MIR3 SINE MIR 168 198 -10 1179 191 5 5 chr5 32188836 32189051 -167441099 + AluJb SINE Alu 75 289 -23 212 257 57 76 chr5 32190229 32190334 -167439816 + MIR SINE MIR 92 194 -68 371 341 130 18 chr5 32190778 32191073 -167439077 + L2 LINE L2 1476 1737 -1577 1631 186 3 40 chr5 32191073 32191396 -167438754 - AluJb SINE Alu -1 311 1 371 341 130 18 chr5 32191396 32191754 -167438396 + L2 LINE L2 1737 2202 -1112 359 323 85 87 chr5 32192111 32192690 -167437460 + L2 LINE L2 2672 3267 -5 1363 158 63 56 chr5 32193026 32193310 -167436840 - AluJb SINE Alu -22 290 5 28 29 0 0 chr5 32193622 32193657 -167436493 + AT_rich Low_complexity Low_complexity 1 35 0 240 304 216 0 chr5 32194459 32194561 -167435589 + MIR SINE MIR 110 233 -29 2164 130 0 3 chr5 32194578 32194886 -167435264 - AluSg SINE Alu -3 307 1 1077 147 12 2 chr5 32194953 32195205 -167434945 + AluSx SINE Alu 2 310 0 2559 56 7 3 chr5 32195724 32196030 -167434120 + AluY SINE Alu 1 307 -4 1993 114 17 27 chr5 32196125 32196422 -167433728 + AluSg SINE Alu 1 294 -16 1291 99 0 68 chr5 32197122 32197343 -167432807 - AluSg/x SINE Alu -18 294 89 958 72 7 29 chr5 32197458 32197596 -167432554 - AluSg SINE Alu -175 135 1 2429 127 36 69 chr5 32197766 32197828 -167432322 - Tigger2a DNA MER2_type -2274 434 371 1614 157 34 0 chr5 32197828 32198095 -167432055 - AluJb SINE Alu -16 296 21 2429 127 36 69 chr5 32198095 32198481 -167431669 - Tigger2a DNA MER2_type -2337 371 1 2041 153 16 62 chr5 32199386 32199583 -167430567 - L1MB8 LINE L1 -87 6091 5886 369 124 0 186 chr5 32199583 32199680 -167430470 - MADE1 DNA Mariner 0 80 2 2041 153 16 62 chr5 32199680 32199914 -167430236 - L1MB8 LINE L1 -292 5886 5680 301 312 84 42 chr5 32199935 32200150 -167430000 - L1ME4a LINE L1 -208 5913 5690 1778 171 60 106 chr5 32200298 32200413 -167429737 - Charlie1b DNA MER1_type -2238 523 404 2288 84 10 3 chr5 32200413 32200709 -167429441 + AluSp SINE Alu 1 298 -15 1778 171 60 106 chr5 32200709 32201050 -167429100 - Charlie1b DNA MER1_type -2357 404 94 2038 147 0 0 chr5 32201050 32201342 -167428808 - AluSx SINE Alu -20 292 1 1778 171 60 106 chr5 32201342 32201432 -167428718 - Charlie1b DNA MER1_type -2667 94 1 328 350 17 8 chr5 32201767 32201884 -167428266 - L2 LINE L2 -22 3291 3174 1406 159 107 15 chr5 32202021 32202291 -167427859 + AluJb SINE Alu 1 295 -17 614 180 0 0 chr5 32202698 32202798 -167427352 - Tigger7 DNA MER2_type 0 2487 2388 * 1176 227 51 8 chr5 32202795 32203051 -167427099 - Tigger7 DNA MER2_type -2220 267 1 364 238 56 88 chr5 32203051 32203271 -167426879 + Charlie8 DNA MER1_type 175 477 -1940 2051 122 0 17 chr5 32203893 32204187 -167425963 - AluSx SINE Alu -23 289 1 297 204 10 3 chr5 32204435 32204517 -167425633 - AluJb SINE Alu -49 253 139 745 203 0 8 chr5 32204574 32204697 -167425453 + FLAM_C SINE Alu 3 124 -19 201 74 0 0 chr5 32205179 32205206 -167424944 + (CATG)n Simple_repeat Simple_repeat 1 27 0 2492 179 61 2 chr5 32206053 32206574 -167423576 + MER57B-int LTR ERV1 3592 4143 -3673 * 15571 132 32 45 chr5 32206572 32206816 -167423334 + MER57B-int LTR ERV1 1853 2099 -5438 2263 103 0 0 chr5 32206816 32207107 -167423043 + AluY SINE Alu 1 291 -20 15571 132 32 45 chr5 32207107 32207216 -167422934 + MER57B-int LTR ERV1 2099 2208 -5329 2220 111 3 0 chr5 32207216 32207505 -167422645 + AluSp SINE Alu 1 290 -23 15571 132 32 45 chr5 32207505 32207940 -167422210 + MER57B-int LTR ERV1 2208 2647 -4890 2557 56 0 3 chr5 32207940 32208243 -167421907 - AluY SINE Alu -9 302 1 15571 132 32 45 chr5 32208243 32209175 -167420975 + MER57B-int LTR ERV1 2647 3590 -3947 5558 106 28 7 chr5 32209175 32209938 -167420212 + MER4E LTR ERV1 1 779 0 15571 132 32 45 chr5 32209938 32211182 -167418968 + MER57B-int LTR ERV1 3590 7146 -391 746 114 23 38 chr5 32211182 32211313 -167418837 + LTR54B LTR ERV1 3 131 -367 1402 108 147 9 chr5 32211316 32211548 -167418602 + MER57B-int LTR ERV1 7274 7537 0 2669 127 13 80 chr5 32211548 32211812 -167418338 + MER57B LTR ERV1 1 222 -212 2488 57 0 3 chr5 32211812 32212111 -167418039 - AluY SINE Alu -13 298 1 2669 127 13 80 chr5 32212111 32212309 -167417841 + MER57B LTR ERV1 222 432 -2 180 0 0 0 chr5 32212342 32212362 -167417788 + (TA)n Simple_repeat Simple_repeat 1 20 0 1463 213 7 0 chr5 32212486 32212763 -167417387 + AluJb SINE Alu 1 279 -33 189 0 0 0 chr5 32212769 32212790 -167417360 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 2234 99 0 0 chr5 32212971 32213287 -167416863 + AluSx SINE Alu 1 316 0 797 176 0 8 chr5 32213544 32213669 -167416481 + FLAM_A SINE Alu 1 124 -9 240 214 0 0 chr5 32215500 32215556 -167414594 + (CA)n Simple_repeat Simple_repeat 1 56 0 289 276 13 0 chr5 32216145 32216221 -167413929 + MIR SINE MIR 69 145 -63 2471 81 3 0 chr5 32216745 32217055 -167413095 + AluSx SINE Alu 1 311 -1 2157 128 0 0 chr5 32217066 32217364 -167412786 + AluSx SINE Alu 1 298 -14 1885 163 0 0 chr5 32217741 32218067 -167412083 - AluJb SINE Alu 0 326 1 2481 78 3 0 chr5 32218076 32218383 -167411767 - AluY SINE Alu -3 308 1 2007 115 4 4 chr5 32218471 32218749 -167411401 + AluSx SINE Alu 35 312 0 733 270 77 31 chr5 32218842 32219064 -167411086 - MIR SINE MIR -27 235 4 255 289 106 35 chr5 32219077 32219122 -167411028 - L1MC/D LINE L1 -2149 5659 5619 1635 149 101 4 chr5 32219122 32219398 -167410752 - AluSx SINE Alu -9 303 1 255 289 106 35 chr5 32219398 32219494 -167410656 - L1MC/D LINE L1 -2189 5619 5508 819 197 0 0 chr5 32220106 32220238 -167409912 + AluJb SINE Alu 2 133 -179 2474 92 0 0 chr5 32220284 32220587 -167409563 - AluSp SINE Alu -5 308 6 232 247 148 37 chr5 32220662 32220743 -167409407 - L2 LINE L2 -1 3271 3182 27 0 0 0 chr5 32221185 32221212 -167408938 + AT_rich Low_complexity Low_complexity 1 27 0 672 106 0 0 chr5 32221258 32221352 -167408798 - AluY SINE Alu 0 311 218 210 226 36 12 chr5 32221961 32222045 -167408105 + (CA)n Simple_repeat Simple_repeat 1 86 0 343 289 58 42 chr5 32225511 32225552 -167404598 - MLT1L LTR MaLR -248 367 328 2783 146 19 5 chr5 32225552 32225970 -167404180 + MER61B LTR ERV1 1 424 -1 343 289 58 42 chr5 32225970 32226118 -167404032 - MLT1L LTR MaLR -287 328 175 443 156 0 0 chr5 32226147 32226211 -167403939 + MER5A DNA MER1_type 17 80 -109 1401 164 0 9 chr5 32226217 32226448 -167403702 + AluSx SINE Alu 11 239 -73 476 150 21 34 chr5 32226476 32226576 -167403574 + MER5A DNA MER1_type 50 151 -32 2032 186 55 4 chr5 32228241 32228693 -167401457 + L1 LINE L1 3991 4465 -1681 277 148 229 0 chr5 32228725 32228786 -167401364 + AluJ/FRAM SINE Alu 223 297 -5 1859 118 14 3 chr5 32228791 32229088 -167401062 + AluSx SINE Alu 7 306 -6 1360 118 99 9 chr5 32229089 32229310 -167400840 + MSTA LTR MaLR 188 428 0 871 162 42 65 chr5 32229311 32229527 -167400623 - MSTB1 LTR MaLR -221 211 1 836 190 86 19 chr5 32229955 32230177 -167399973 + MER21B LTR ERV1 548 857 -74 269 181 69 0 chr5 32230263 32230335 -167399815 + L1MC4 LINE L1 7965 8041 -1 1903 122 24 0 chr5 32230343 32230637 -167399513 + AluSx SINE Alu 1 301 -11 431 125 16 0 chr5 32231093 32231157 -167398993 + MLT2B2 LTR ERVL 348 412 -103 366 115 0 0 chr5 32231160 32231221 -167398929 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 2108 147 163 62 chr5 32231224 32231667 -167398483 - MLT2B3 LTR ERVL 0 554 53 1826 127 18 0 chr5 32231667 32231950 -167398200 - AluSx SINE Alu -15 297 10 2108 147 163 62 chr5 32231950 32232009 -167398141 - MLT2B3 LTR ERVL -501 53 1 294 167 0 0 chr5 32232011 32232059 -167398091 + MLT2C2 LTR ERVL 417 464 0 308 153 92 82 chr5 32232059 32232157 -167397993 + L1MB3 LINE L1 6084 6182 -1 1282 181 13 25 chr5 32232738 32233052 -167397098 + AluJo SINE Alu 1 310 -2 488 94 59 0 chr5 32233052 32233137 -167397013 + L1MB4 LINE L1 6091 6180 0 11547 72 26 6 chr5 32234235 32235833 -167394317 + HERV9 LTR ERV1 3049 4678 -3721 1481 174 40 16 chr5 32236044 32236348 -167393802 - L1MB7 LINE L1 -62 6122 5812 3182 128 81 40 chr5 32236355 32236833 -167393317 - L1MB2 LINE L1 -3 6168 5654 1718 120 35 7 chr5 32236833 32237117 -167393033 - AluSx SINE Alu -20 292 1 3182 128 81 40 chr5 32237117 32237304 -167392846 - L1MB2 LINE L1 -517 5654 5476 285 146 0 0 chr5 32237304 32237352 -167392798 + (TTCCC)n Simple_repeat Simple_repeat 4 51 0 914 196 25 0 chr5 32237394 32237593 -167392557 - AluJb SINE Alu -19 293 90 1442 265 34 17 chr5 32238017 32238428 -167391722 + MER20B DNA MER1_type 4 421 -362 891 71 0 0 chr5 32238451 32238564 -167391586 + AluSp SINE Alu 1 113 -200 1664 131 28 28 chr5 32238567 32238858 -167391292 - AluSq SINE Alu -22 291 1 1277 269 59 44 chr5 32238869 32239282 -167390868 - L1ME3A LINE L1 0 6170 5744 1729 157 53 58 chr5 32239282 32239324 -167390826 - THE1C LTR MaLR 0 375 334 1932 118 42 0 chr5 32239324 32239611 -167390539 + AluSx SINE Alu 1 299 -13 1729 157 53 58 chr5 32239611 32239945 -167390205 - THE1C LTR MaLR -41 334 1 1277 269 59 44 chr5 32239945 32240104 -167390046 - L1ME3A LINE L1 -426 5744 5589 623 86 0 0 chr5 32241954 32242035 -167388115 + MER51B LTR ERV1 1 81 -296 246 304 144 8 chr5 32242045 32242170 -167387980 + MIR SINE MIR 119 260 -2 21 0 0 0 chr5 32242556 32242577 -167387573 + AT_rich Low_complexity Low_complexity 1 21 0 859 48 105 0 chr5 32244297 32244421 -167385729 - MER85 DNA T2_type -2 137 1 303 194 21 54 chr5 32244936 32245029 -167385121 - MER96 DNA MER1_type? -85 90 1 2062 89 45 0 chr5 32245266 32245558 -167384592 - AluSc SINE Alu -3 306 2 698 62 0 10 chr5 32245558 32245655 -167384495 + (TTTC)n Simple_repeat Simple_repeat 2 97 0 1864 138 0 3 chr5 32245656 32245938 -167384212 - AluSx SINE Alu -31 281 1 2192 150 30 57 chr5 32246193 32246414 -167383736 + MSTB1 LTR MaLR 1 206 -226 2794 104 67 2 chr5 32246414 32246816 -167383334 - MSTA LTR MaLR 0 428 1 2192 150 30 57 chr5 32246816 32247034 -167383116 + MSTB1 LTR MaLR 206 428 -4 852 264 14 9 chr5 32247249 32247465 -167382685 - MER20 DNA MER1_type 0 219 3 283 203 49 16 chr5 32247917 32248040 -167382110 + (TA)n Simple_repeat Simple_repeat 1 127 0 439 128 2 4 chr5 32248234 32248310 -167381840 - MSTB2 LTR MaLR -3 454 351 209 186 0 23 chr5 32248628 32248671 -167381479 + C-rich Low_complexity Low_complexity 4 45 0 2014 127 144 8 chr5 32249218 32249264 -167380886 - MLT2D LTR ERVL -2 412 374 774 32 0 0 chr5 32249264 32249357 -167380793 + (TG)n Simple_repeat Simple_repeat 1 93 0 2014 127 144 8 chr5 32249357 32249671 -167380479 - MLT2D LTR ERVL -40 374 3 268 281 0 62 chr5 32250139 32250235 -167379915 + MIR3 SINE MIR 114 203 -5 839 194 7 19 chr5 32250330 32250485 -167379665 - FRAM SINE Alu -12 154 2 390 202 20 20 chr5 32250638 32250737 -167379413 - MLT1L LTR MaLR -4 611 513 1650 128 91 4 chr5 32250737 32251011 -167379139 + L1MC1 LINE L1 5929 6226 -107 381 301 36 31 chr5 32251020 32251216 -167378934 + MER34 LTR ERV1 1 197 -345 664 194 16 0 chr5 32251278 32251407 -167378743 + FRAM SINE Alu 11 141 -35 204 40 0 0 chr5 32251410 32251435 -167378715 + (TG)n Simple_repeat Simple_repeat 2 26 0 1512 127 14 0 chr5 32251591 32251812 -167378338 + LTR62 LTR ERVK 1 224 -495 1288 45 0 0 chr5 32251812 32251969 -167378181 - AluY SINE Alu -7 304 148 2949 141 29 41 chr5 32251971 32251999 -167378151 + LTR62 LTR ERVK 214 241 -478 2183 102 6 29 chr5 32251999 32252313 -167377837 + AluSx SINE Alu 1 307 -5 2264 98 3 0 chr5 32252320 32252625 -167377525 + AluSp SINE Alu 1 306 -7 2949 141 29 41 chr5 32252625 32253098 -167377052 + LTR62 LTR ERVK 247 717 -2 501 293 47 7 chr5 32253100 32253250 -167376900 + MER34 LTR ERV1 352 507 -35 580 141 0 0 chr5 32253295 32253380 -167376770 + L1MC1 LINE L1 6235 6319 -14 512 278 134 57 chr5 32253387 32253740 -167376410 - MLT1L LTR MaLR -74 521 157 327 49 0 0 chr5 32253821 32253862 -167376288 + (CA)n Simple_repeat Simple_repeat 2 42 0 180 111 0 0 chr5 32253897 32253924 -167376226 + (TA)n Simple_repeat Simple_repeat 2 28 0 222 37 0 0 chr5 32253984 32254011 -167376139 + (TG)n Simple_repeat Simple_repeat 2 28 0 1302 243 146 47 chr5 32254076 32254583 -167375567 - MER34B LTR ERV1 -3 562 6 209 127 16 48 chr5 32254603 32254666 -167375484 + T-rich Low_complexity Low_complexity 6 66 0 1829 139 4 0 chr5 32254671 32254952 -167375198 - AluSx SINE Alu 0 312 31 33886 85 4 6 chr5 32254952 32259387 -167370763 + Harlequin LTR ERV1 548 4974 -3425 747 141 138 15 chr5 32259354 32259623 -167370527 + Harlequin LTR ERV1 840 1141 -5755 * 6814 113 5 8 chr5 32259621 32260808 -167369342 + Harlequin LTR ERV1 504 8398 -1 3649 92 317 0 chr5 32260887 32261514 -167368636 + LTR12 LTR ERV1 1 826 0 365 205 43 0 chr5 32261514 32261597 -167368553 - AluJ/FLAM SINE Alu -236 66 2 317 264 106 44 chr5 32261672 32261945 -167368205 - MER95 LTR ERV -132 299 10 549 294 92 14 chr5 32262345 32262563 -167367587 + MIR SINE MIR 19 253 -9 1932 143 0 0 chr5 32262708 32263002 -167367148 + AluJb SINE Alu 1 294 -18 285 146 0 0 chr5 32263044 32263092 -167367058 + (GGGAA)n Simple_repeat Simple_repeat 4 51 0 3600 126 66 28 chr5 32263092 32263282 -167366868 + L1MB2 LINE L1 5476 5657 -514 1820 133 23 13 chr5 32263282 32263583 -167366567 + AluSx SINE Alu 1 304 -8 3600 126 66 28 chr5 32263583 32264060 -167366090 + L1MB2 LINE L1 5657 6168 -3 1621 173 23 16 chr5 32264067 32264374 -167365776 + L1MB7 LINE L1 5812 6120 -64 368 269 0 0 chr5 32264379 32264457 -167365693 - Tigger1 DNA MER2_type -3 2415 2338 1843 127 7 14 chr5 32264457 32264733 -167365417 + AluSq SINE Alu 16 289 -24 783 216 43 75 chr5 32264741 32265105 -167365045 - MLT1C LTR MaLR -50 417 2 270 296 148 0 chr5 32265105 32265247 -167364903 + MIR SINE MIR 91 253 -9 211 238 12 24 chr5 32265789 32265815 -167364335 + (CAAA)n Simple_repeat Simple_repeat 2 27 -57 2044 93 3 46 chr5 32265815 32266139 -167364011 + AluSx SINE Alu 1 310 -2 211 238 12 24 chr5 32266139 32266196 -167363954 + (CAAA)n Simple_repeat Simple_repeat 27 84 0 631 306 57 21 chr5 32267432 32267886 -167362264 + MARNA DNA Mariner 58 569 -17 1837 113 0 85 chr5 32268641 32268959 -167361191 - AluSx SINE Alu -17 295 5 1412 196 71 37 chr5 32269082 32269434 -167360716 - MLT1A1 LTR MaLR -1 364 1 2236 118 113 40 chr5 32270104 32270325 -167359825 - MSTA LTR MaLR -1 427 224 2214 105 0 0 chr5 32270325 32270631 -167359519 - AluSc SINE Alu -3 306 1 2236 118 113 40 chr5 32270631 32270807 -167359343 - MSTA LTR MaLR -204 224 1 1718 122 0 85 chr5 32271387 32271578 -167358572 - AluJb SINE Alu -11 301 148 2349 91 0 0 chr5 32271578 32271887 -167358263 - AluSc SINE Alu 0 309 1 1718 122 0 85 chr5 32271887 32272024 -167358126 - AluJb SINE Alu -164 148 1 2084 79 3 60 chr5 32272688 32273006 -167357144 - AluSq SINE Alu -13 300 1 1999 117 28 0 chr5 32273462 32273753 -167356397 - AluSx SINE Alu -10 302 4 623 86 0 0 chr5 32274190 32274271 -167355879 + MER51B LTR ERV1 1 81 -296 368 323 75 0 chr5 32274281 32274414 -167355736 + MIR SINE MIR 118 260 -2 21 0 0 0 chr5 32274809 32274830 -167355320 + AT_rich Low_complexity Low_complexity 1 21 0 1000 39 78 8 chr5 32276583 32276711 -167353439 - MER85 DNA T2_type -2 137 1 1970 136 10 0 chr5 32277102 32277396 -167352754 - AluSx SINE Alu -15 297 1 21 57 0 0 chr5 32277467 32277502 -167352648 + AT_rich Low_complexity Low_complexity 1 35 0 807 166 0 14 chr5 32278177 32278322 -167351828 + FLAM_C SINE Alu 1 143 0 1541 160 35 28 chr5 32278582 32278864 -167351286 - AluJo SINE Alu -18 294 11 1308 76 6 12 chr5 32280078 32280249 -167349901 - AluSp SINE Alu -10 303 134 2380 68 10 10 chr5 32280249 32280556 -167349594 - AluSq SINE Alu -6 307 1 2218 110 0 0 chr5 32281192 32281491 -167348659 - AluSg1 SINE Alu -10 299 1 1731 144 35 11 chr5 32282513 32282798 -167347352 - AluJb SINE Alu -20 292 1 2365 80 0 3 chr5 32283186 32283485 -167346665 - AluSc SINE Alu -11 298 1 24 32 0 0 chr5 32283960 32283991 -167346159 + AT_rich Low_complexity Low_complexity 1 31 0 1681 112 29 54 chr5 32284103 32284380 -167345770 + MER1B DNA MER1_type 70 339 0 22 0 0 0 chr5 32284677 32284699 -167345451 + AT_rich Low_complexity Low_complexity 1 22 0 2774 205 118 24 chr5 32284703 32285527 -167344623 - L1ME2 LINE L1 -10 6154 5254 1320 234 48 50 chr5 32285817 32286316 -167343834 - L1ME2 LINE L1 -918 5228 4731 2218 144 116 40 chr5 32286650 32287100 -167343050 - L1MB2 LINE L1 -79 6092 5609 1436 134 40 28 chr5 32287146 32287399 -167342751 - Tigger2 DNA MER2_type 0 2718 2463 2416 127 29 59 chr5 32287479 32287570 -167342580 - Tigger2 DNA MER2_type -1964 754 662 780 179 0 50 chr5 32287570 32287710 -167342440 - FLAM_A SINE Alu 0 133 1 2416 127 29 59 chr5 32287710 32288334 -167341816 - Tigger2 DNA MER2_type -2056 662 3 434 263 122 47 chr5 32289488 32289701 -167340449 - MIR SINE MIR -4 258 30 493 133 0 0 chr5 32290100 32290175 -167339975 - AluS SINE Alu -15 294 220 266 135 0 0 chr5 32291450 32291487 -167338663 - MER57A LTR ERV1 -72 331 295 2188 114 10 0 chr5 32293381 32293687 -167336463 + AluSx SINE Alu 1 309 -3 186 318 82 0 chr5 32294023 32294108 -167336042 - L3b LINE CR1 -304 1279 1188 825 249 0 6 chr5 32294119 32294288 -167335862 - FAM SINE Alu -5 170 3 265 203 62 16 chr5 32294348 32294412 -167335738 - L1MC4 LINE L1 -35 8007 7941 * 416 255 166 6 chr5 32294393 32294550 -167335600 - L1MC4 LINE L1 -306 7736 7555 213 235 289 18 chr5 32294550 32294716 -167335434 - L2 LINE L2 -1395 1919 1709 2511 65 3 0 chr5 32294812 32295118 -167335032 - AluY SINE Alu -3 308 2 2195 83 7 3 chr5 32295225 32295513 -167334637 - AluSg1 SINE Alu -9 300 12 2135 125 14 0 chr5 32295893 32296190 -167333960 - AluSx SINE Alu -11 301 1 316 203 40 0 chr5 32296199 32296273 -167333877 - L1MC4 LINE L1 -1 8041 7965 2973 216 88 23 chr5 32296360 32297097 -167333053 - MER21B LTR ERV1 -60 803 19 287 250 87 0 chr5 32297142 32297234 -167332916 - L1MC4 LINE L1 -124 7918 7819 1301 142 132 43 chr5 32297247 32297445 -167332705 - Charlie1 DNA MER1_type -193 2568 2332 1906 130 56 0 chr5 32297445 32297730 -167332420 - AluSq SINE Alu -11 302 2 1301 142 132 43 chr5 32297730 32297834 -167332316 - Charlie1 DNA MER1_type -429 2332 2239 1143 228 32 4 chr5 32297828 32298078 -167332072 - Charlie1 DNA MER1_type -810 1951 1695 * 989 257 130 25 chr5 32298078 32298517 -167331633 - L1MC4 LINE L1 -213 7829 7345 2638 48 0 3 chr5 32298519 32298830 -167331320 - AluY SINE Alu -1 310 1 1910 159 0 10 chr5 32298842 32299156 -167330994 - AluSx SINE Alu -1 311 1 790 269 93 41 chr5 32299249 32299666 -167330484 + ERVL LTR ERVL 4941 5379 -385 255 270 130 40 chr5 32300092 32300292 -167329858 + LTR33 LTR ERVL 302 519 -2 282 197 239 0 chr5 32302000 32302117 -167328033 - MER5C DNA MER1_type -51 273 129 1669 201 3 7 chr5 32302449 32302747 -167327403 - AluJo SINE Alu -15 297 1 24 32 0 0 chr5 32302750 32302781 -167327369 + AT_rich Low_complexity Low_complexity 1 31 0 1692 104 0 0 chr5 32303085 32303306 -167326844 - AluSx SINE Alu -91 221 1 1920 219 86 39 chr5 32303312 32303556 -167326594 - L1MC4a LINE L1 0 7808 7577 2368 97 0 3 chr5 32303556 32303866 -167326284 - AluSg SINE Alu -1 309 1 243 0 0 0 chr5 32303872 32303899 -167326251 + (TG)n Simple_repeat Simple_repeat 2 28 0 1920 219 86 39 chr5 32303899 32304182 -167325968 - L1MC4a LINE L1 -235 7573 7249 632 292 125 32 chr5 32304182 32304583 -167325567 - L2 LINE L2 -2790 524 87 504 242 198 13 chr5 32304590 32304747 -167325403 + MER5A DNA MER1_type 4 189 0 2182 126 0 0 chr5 32304878 32305179 -167324971 - AluSx SINE Alu -11 301 1 368 296 117 11 chr5 32305253 32305432 -167324718 + LTR67 LTR ERVL 353 550 -7 435 254 196 0 chr5 32305861 32305999 -167324151 - L1ME3A LINE L1 -171 5999 5835 299 230 27 0 chr5 32306042 32306116 -167324034 - L1ME3A LINE L1 -304 5866 5791 950 85 46 8 chr5 32306595 32306725 -167323425 + AluJb SINE Alu 1 135 -177 520 240 16 24 chr5 32307654 32307779 -167322371 - L2 LINE L2 -1 3312 3189 429 172 101 10 chr5 32307779 32307878 -167322272 + MER3 DNA MER1_type 1 108 -101 804 144 7 55 chr5 32307986 32308132 -167322018 - L1ME3A LINE L1 -544 5640 5502 1965 163 21 6 chr5 32308608 32308940 -167321210 - L1MC1 LINE L1 -11 6322 5986 347 347 72 16 chr5 32308949 32309142 -167321008 - L3 LINE CR1 -113 1464 1261 225 238 0 95 chr5 32310091 32310175 -167319975 - L3b LINE CR1 -131 1452 1377 476 265 0 26 chr5 32310710 32310827 -167319323 + MIR SINE MIR 46 159 -103 444 250 0 0 chr5 32311929 32312021 -167318129 - Charlie5 DNA MER1_type -2520 92 1 2887 62 10 77 chr5 32312093 32312497 -167317653 + MER51B LTR ERV1 1 377 0 340 230 103 85 chr5 32312528 32312693 -167317457 - MER102b DNA MER1_type -20 321 154 1683 123 20 0 chr5 32313562 32313806 -167316344 + AluSx SINE Alu 64 312 0 243 88 0 0 chr5 32317519 32317553 -167312597 + (TAA)n Simple_repeat Simple_repeat 2 35 0 291 266 9 46 chr5 32318243 32318352 -167311798 + MER103 DNA DNA 24 128 -38 225 222 81 71 chr5 32318466 32318565 -167311585 - MLT1K LTR MaLR -8 580 481 841 185 56 11 chr5 32318595 32318773 -167311377 - MIR SINE MIR -1 261 76 1494 130 88 77 chr5 32318998 32319283 -167310867 + AluSx SINE Alu 1 288 -24 1833 215 52 42 chr5 32320472 32320656 -167309494 - MLT1D LTR MaLR 0 505 324 867 152 0 0 chr5 32320656 32320781 -167309369 - FLAM_C SINE Alu -6 127 3 1833 215 52 42 chr5 32320781 32321094 -167309056 - MLT1D LTR MaLR -181 324 3 258 314 92 16 chr5 32321505 32321690 -167308460 + L1MC/D LINE L1 5703 5901 -1907 2158 85 0 31 chr5 32321846 32322194 -167307956 - AluSx SINE Alu 0 339 1 2226 113 0 3 chr5 32322624 32322925 -167307225 - AluSg SINE Alu -10 300 1 736 124 0 0 chr5 32324128 32324225 -167305925 + AluJ/FLAM SINE Alu 3 99 -213 188 100 25 0 chr5 32324232 32324272 -167305878 + (TA)n Simple_repeat Simple_repeat 1 41 0 2004 104 4 11 chr5 32324278 32324556 -167305594 - AluSx SINE Alu -36 276 1 1293 140 9 28 chr5 32324904 32325118 -167305032 - AluJo SINE Alu -19 293 84 405 175 0 0 chr5 32325193 32325256 -167304894 - AluJ/FLAM SINE Alu -249 63 1 325 228 129 25 chr5 32325274 32325504 -167304646 - L1MC4 LINE L1 -724 7318 6914 452 66 0 0 chr5 32325583 32325644 -167304506 + Alu SINE Alu 241 301 -11 2656 55 0 0 chr5 32325648 32325958 -167304192 - AluY SINE Alu -1 310 1 1444 188 81 95 chr5 32325961 32326061 -167304089 - L1MC4 LINE L1 -1135 6907 6807 1257 181 67 0 chr5 32326061 32326299 -167303851 - L1MD1 LINE L1 0 6242 5989 1444 188 81 95 chr5 32326299 32326355 -167303795 - L1MC4 LINE L1 -1235 6807 6752 1994 124 7 0 chr5 32326355 32326692 -167303458 + AluSx SINE Alu 1 339 0 1444 188 81 95 chr5 32326692 32326963 -167303187 - L1MC4 LINE L1 -1290 6752 6484 2012 152 0 0 chr5 32327361 32327671 -167302479 + AluJo SINE Alu 1 310 -2 1646 188 3 3 chr5 32327674 32327956 -167302194 - AluJb SINE Alu -30 282 1 2305 93 0 0 chr5 32328427 32328728 -167301422 - AluSx SINE Alu -9 303 3 2287 56 3 20 chr5 32329649 32329952 -167300198 - AluY SINE Alu -13 298 1 402 21 0 0 chr5 32330009 32330056 -167300094 + (CA)n Simple_repeat Simple_repeat 2 48 0 269 291 35 0 chr5 32330127 32330213 -167299937 + MIR SINE MIR 124 212 -50 1780 142 31 0 chr5 32330393 32330682 -167299468 + AluJb SINE Alu 1 298 -14 222 274 20 0 chr5 32330824 32330875 -167299275 - MIR3 SINE MIR -16 192 141 344 255 194 44 chr5 32330889 32331049 -167299101 - MER20B DNA MER1_type -30 189 2 273 240 125 10 chr5 32331049 32331153 -167298997 - MIR SINE MIR -57 151 36 23 68 0 0 chr5 32332253 32332297 -167297853 + AT_rich Low_complexity Low_complexity 1 44 0 296 286 0 60 chr5 32332527 32332660 -167297490 - MARNA DNA Mariner -41 545 421 23 54 0 0 chr5 32332739 32332776 -167297374 + AT_rich Low_complexity Low_complexity 1 37 0 2482 68 0 0 chr5 32332914 32333225 -167296925 + AluSx SINE Alu 1 311 -1 23 33 0 0 chr5 32333651 32333681 -167296469 + AT_rich Low_complexity Low_complexity 1 30 0 252 295 86 9 chr5 32333747 32333852 -167296298 - MARNA DNA Mariner -141 445 333 294 185 25 49 chr5 32334217 32334298 -167295852 + LTR67 LTR ERVL 459 537 -20 622 219 0 62 chr5 32334508 32334668 -167295482 + MIR SINE MIR 64 213 -49 1102 313 68 8 chr5 32336297 32336762 -167293388 + HERVL LTR ERVL 2648 3156 -2329 347 261 52 20 chr5 32336821 32336974 -167293176 - L1ME4a LINE L1 0 6121 5964 345 87 0 0 chr5 32337034 32337080 -167293070 - L1MB1 LINE L1 -1 6167 6122 2071 113 3 0 chr5 32337083 32337376 -167292774 - AluSx SINE Alu -18 294 1 1490 175 20 34 chr5 32337892 32338189 -167291961 + AluJb SINE Alu 1 293 -19 2397 51 0 3 chr5 32338555 32338850 -167291300 + AluY SINE Alu 1 294 -17 857 230 38 49 chr5 32338864 32339129 -167291021 + MER74B LTR ERVL 356 617 -5 1689 153 3 33 chr5 32339139 32339446 -167290704 - AluJo SINE Alu -1 311 14 1879 122 42 0 chr5 32340096 32340382 -167289768 + AluSx SINE Alu 2 299 -13 267 226 81 0 chr5 32340627 32340689 -167289461 + MIR3 SINE MIR 101 167 -41 1212 134 0 26 chr5 32340787 32341028 -167289122 - AluSp SINE Alu -11 302 1 1715 137 8 0 chr5 32341107 32341369 -167288781 + AluSx SINE Alu 40 303 -9 617 298 63 38 chr5 32341552 32341790 -167288360 + MIR SINE MIR 19 262 0 22 0 0 0 chr5 32341873 32341895 -167288255 + AT_rich Low_complexity Low_complexity 1 22 0 2840 129 41 0 chr5 32342155 32342621 -167287529 + MER31A LTR ERV1 1 485 0 300 356 108 0 chr5 32343251 32343445 -167286705 - LTR16C LTR ERVL -200 291 77 2638 111 8 3 chr5 32343986 32344348 -167285802 - THE1B LTR MaLR 0 364 1 1837 144 58 55 chr5 32344602 32344672 -167285478 - THE1B LTR MaLR 0 364 296 2183 109 0 3 chr5 32344672 32344974 -167285176 + AluSx SINE Alu 1 301 -11 1837 144 58 55 chr5 32344974 32345264 -167284886 - THE1B LTR MaLR -68 296 3 11398 103 13 5 chr5 32345266 32346833 -167283317 - THE1B-int LTR MaLR 0 1580 1 1980 150 42 33 chr5 32346833 32347194 -167282956 - THE1B LTR MaLR 0 364 1 381 159 3 0 chr5 32347359 32347423 -167282727 - FLAM SINE Alu -6 127 71 2426 193 219 101 chr5 32347423 32347514 -167282636 - LTR28 LTR ERV1 0 1020 941 10603 103 17 0 chr5 32347514 32349871 -167280279 - L1PA8 LINE L1 -1 6171 3771 2426 193 219 101 chr5 32349871 32350691 -167279459 - LTR28 LTR ERV1 -79 941 1 39907 152 44 35 chr5 32350694 32353047 -167277103 - LTR28-int LTR ERV1 -3 7088 4758 2022 114 7 3 chr5 32353047 32353345 -167276805 - AluSx SINE Alu -13 299 1 39907 152 44 35 chr5 32353345 32357059 -167273091 - LTR28-int LTR ERV1 -2333 4758 947 212 0 36 0 chr5 32357059 32357087 -167273063 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 39907 152 44 35 chr5 32357087 32358038 -167272112 - LTR28-int LTR ERV1 -6144 947 6 653 191 7 29 chr5 32358041 32358177 -167271973 - LTR28 LTR ERV1 0 1020 888 401 211 135 10 chr5 32358158 32358262 -167271888 + LTR28 LTR ERV1 903 1019 -1 * 552 97 0 0 chr5 32358263 32358335 -167271815 - AluJ/FLAM SINE Alu -238 74 3 2112 112 103 23 chr5 32358363 32358436 -167271714 + MER51B LTR ERV1 2 68 -309 1873 138 10 3 chr5 32358436 32358733 -167271417 + AluSq SINE Alu 1 299 -14 2112 112 103 23 chr5 32358733 32359007 -167271143 + MER51B LTR ERV1 68 377 0 595 274 85 13 chr5 32359202 32359588 -167270562 - ERVL LTR ERVL -838 4926 4439 1292 293 52 3 chr5 32359646 32360032 -167270118 - ERVL LTR ERVL -1468 4296 3892 632 292 185 21 chr5 32360047 32360372 -167269778 - MLT1J LTR MaLR -5 506 129 336 280 87 65 chr5 32360412 32360627 -167269523 - ERVL LTR ERVL -3192 2572 2348 2755 56 18 0 chr5 32360627 32360965 -167269185 - LTR14A LTR ERVK 0 344 1 336 280 87 65 chr5 32360965 32361024 -167269126 - ERVL LTR ERVL -3416 2348 2292 3708 86 317 2 chr5 32361192 32361820 -167268330 - LTR12 LTR ERV1 0 826 1 7018 101 14 7 chr5 32361979 32363154 -167266996 - HERV9 LTR ERV1 0 8399 504 727 148 108 22 chr5 32363152 32363430 -167266720 - HERV9 LTR ERV1 -5755 1141 840 * 445 61 45 0 chr5 32363423 32363489 -167266661 - HERV9 LTR ERV1 -3445 4954 4886 * 12432 105 10 10 chr5 32363485 32366280 -167263870 - HERV9 LTR ERV1 -1949 489 17 3987 108 209 17 chr5 32366280 32366973 -167263177 - LTR12 LTR ERV1 0 826 1 1127 227 30 44 chr5 32367159 32367454 -167262696 - pTR5 LTR ERV1 -1410 1028 738 403 345 38 51 chr5 32367448 32367801 -167262349 - ERVL LTR ERVL -3396 2089 1743 * 695 269 0 6 chr5 32368003 32368159 -167261991 - MER96 DNA MER1_type? -14 161 7 709 254 203 20 chr5 32368361 32368656 -167261494 + LTR16A LTR ERVL 90 438 -12 2252 298 40 44 chr5 32368672 32369597 -167260553 + HERV16 LTR ERVL 5 925 -4071 562 276 77 15 chr5 32369718 32369914 -167260236 + HERV16 LTR ERVL 2322 2529 -2467 352 353 15 7 chr5 32369986 32370122 -167260028 - ERVL LTR ERVL -1908 3856 3720 1376 178 58 101 chr5 32370356 32370771 -167259379 - MLT2C1 LTR ERVL 0 397 1 1991 129 0 0 chr5 32371332 32371612 -167258538 - AluSx SINE Alu -32 280 1 314 170 170 10 chr5 32371957 32372057 -167258093 - LTR67 LTR ERVL -14 543 428 1475 164 13 0 chr5 32372156 32372388 -167257762 + MSTB1 LTR MaLR 198 432 0 8022 201 54 11 chr5 32372388 32373971 -167256179 + MSTB1-int LTR MaLR 1 1651 0 32 0 0 0 chr5 32374178 32374210 -167255940 + AT_rich Low_complexity Low_complexity 1 32 0 3091 67 5 7 chr5 32374214 32374618 -167255532 - L1PA7 LINE L1 0 6154 5752 1860 165 22 48 chr5 32374618 32374976 -167255174 + MSTB1 LTR MaLR 44 392 -40 1339 191 37 18 chr5 32374983 32375256 -167254894 + AluJo SINE Alu 14 291 -21 377 80 0 0 chr5 32375256 32375306 -167254844 + MSTB1 LTR MaLR 383 432 0 246 371 0 0 chr5 32375409 32375525 -167254625 + (TTAGGG)n Simple_repeat Simple_repeat 1 116 0 229 324 15 0 chr5 32376274 32376342 -167253808 + L2 LINE L2 3204 3272 0 238 224 0 17 chr5 32376493 32376551 -167253599 + LTR33A LTR ERVL 444 500 -23 316 306 22 22 chr5 32378835 32378969 -167251181 - MLT1J LTR MaLR -377 134 1 557 219 115 74 chr5 32379284 32379793 -167250357 + MLT1H LTR MaLR 20 549 0 227 348 11 11 chr5 32380010 32380102 -167250048 + MLT1K LTR MaLR 186 277 -311 307 340 135 23 chr5 32380238 32380453 -167249697 + L1ME LINE L1 5537 5775 -387 1864 135 7 7 chr5 32381462 32381751 -167248399 + AluJb SINE Alu 5 293 -19 196 373 0 0 chr5 32382976 32383043 -167247107 - L2 LINE L2 0 3313 3247 21 0 0 0 chr5 32383148 32383169 -167246981 + AT_rich Low_complexity Low_complexity 1 21 0 16713 143 19 15 chr5 32383175 32383876 -167246274 - L1MA3 LINE L1 0 7724 7027 2363 84 0 13 chr5 32383876 32384187 -167245963 - AluY SINE Alu -4 307 1 16713 143 19 15 chr5 32384187 32387907 -167242243 - L1MA3 LINE L1 -697 7027 3273 1975 108 0 21 chr5 32387907 32388186 -167241964 - L1PA8 LINE L1 0 6172 5900 16713 143 19 15 chr5 32388186 32389028 -167241122 - L1MA3 LINE L1 -4451 3273 2436 6546 55 0 0 chr5 32389015 32389801 -167240349 - L1PA6 LINE L1 0 6154 5369 * 7484 122 3 4 chr5 32389802 32390873 -167239277 - L1MA3 LINE L1 -5101 2464 1395 6713 26 0 4 chr5 32390880 32391652 -167238498 - L1PA3 LINE L1 -3 6152 5384 * 8872 150 9 21 chr5 32391651 32392990 -167237160 - L1MA3 LINE L1 -6151 1414 91 297 0 0 0 chr5 32392990 32393023 -167237127 + (TG)n Simple_repeat Simple_repeat 2 34 0 8872 150 9 21 chr5 32393023 32393100 -167237050 - L1MA3 LINE L1 -7474 91 15 3380 156 76 19 chr5 32393567 32393959 -167236191 + HSMAR2 DNA Mariner 3 444 -858 3027 109 26 12 chr5 32393959 32394381 -167235769 - MSTA LTR MaLR 0 428 1 3380 156 76 19 chr5 32394381 32394603 -167235547 + HSMAR2 DNA Mariner 444 652 -650 2097 155 70 8 chr5 32394600 32394986 -167235164 + MSTA LTR MaLR 19 428 0 * 3854 134 59 11 chr5 32394989 32395603 -167234547 + HSMAR2 DNA Mariner 657 1299 -3 31 44 0 0 chr5 32395901 32395946 -167234204 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr5 32396037 32396058 -167234092 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 32396616 32396636 -167233514 + (A)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr5 32397061 32397090 -167233060 + AT_rich Low_complexity Low_complexity 1 29 0 193 287 115 11 chr5 32397215 32397302 -167232848 + MIR3 SINE MIR 92 187 -21 221 171 0 0 chr5 32398003 32398044 -167232106 + T-rich Low_complexity Low_complexity 1 41 0 357 82 0 0 chr5 32399499 32399548 -167230602 + (TG)n Simple_repeat Simple_repeat 1 49 0 203 133 0 44 chr5 32399801 32399846 -167230304 + (CACCC)n Simple_repeat Simple_repeat 3 45 0 189 107 0 0 chr5 32400168 32400196 -167229954 + (T)n Simple_repeat Simple_repeat 1 28 0 225 159 0 0 chr5 32400458 32400502 -167229648 + (CGG)n Simple_repeat Simple_repeat 1 44 0 400 309 58 5 chr5 32403478 32403666 -167226484 + MIR SINE MIR 59 256 -6 24 53 0 0 chr5 32404215 32404253 -167225897 + AT_rich Low_complexity Low_complexity 1 38 0 597 248 146 36 chr5 32404857 32405131 -167225019 - HAL1 LINE L1 -35 2472 2169 748 129 86 17 chr5 32405132 32405248 -167224902 + FAM SINE Alu 37 160 -25 469 269 48 14 chr5 32405257 32405465 -167224685 - HAL1 LINE L1 -335 2172 1958 12382 65 19 4 chr5 32405470 32407124 -167223026 - L1PA6 LINE L1 -3 6151 4470 189 0 0 0 chr5 32407124 32407145 -167223005 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 12382 65 19 4 chr5 32407145 32407815 -167222335 - L1PA6 LINE L1 -1684 4470 3812 1142 274 71 16 chr5 32407815 32408513 -167221637 - HAL1 LINE L1 -647 1860 1063 22 0 0 0 chr5 32409296 32409318 -167220832 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 32409527 32409570 -167220580 + AT_rich Low_complexity Low_complexity 1 43 0 1435 187 73 11 chr5 32410001 32410274 -167219876 + AluSx SINE Alu 1 290 -22 1251 243 91 32 chr5 32410351 32410725 -167219425 - MSTD LTR MaLR 0 396 1 447 220 10 33 chr5 32412304 32412439 -167217711 - L1MC4 LINE L1 0 8040 7880 438 176 0 0 chr5 32412456 32412541 -167217609 + CT-rich Low_complexity Low_complexity 3 87 0 1890 246 72 56 chr5 32412568 32413264 -167216886 - L1MC4 LINE L1 -115 7927 7221 2634 131 45 0 chr5 32413495 32413899 -167216251 + L1PA16 LINE L1 5743 6164 -2 328 246 58 92 chr5 32414158 32414398 -167215752 - MER112 DNA MER1_type -6 254 23 249 282 0 39 chr5 32414376 32414454 -167215696 - MER112 DNA MER1_type -185 75 1 * 536 236 107 96 chr5 32415345 32415749 -167214401 - L1ME4a LINE L1 -22 6099 5579 1798 166 0 10 chr5 32415749 32416045 -167214105 - AluJb SINE Alu -13 299 7 536 236 107 96 chr5 32416045 32416149 -167214001 - L1ME4a LINE L1 -542 5579 5478 343 302 98 34 chr5 32416156 32416391 -167213759 - L1ME4a LINE L1 -1639 4507 4258 265 274 40 40 chr5 32416391 32416515 -167213635 - L1P LINE L1 -1924 4222 4099 248 154 13 90 chr5 32416553 32416631 -167213519 - L1ME4a LINE L1 -2160 3986 3915 402 310 27 46 chr5 32416649 32416801 -167213349 - L1ME4a LINE L1 -2302 3844 3698 2352 100 0 3 chr5 32416801 32417102 -167213048 + AluSq SINE Alu 1 300 -13 402 310 27 46 chr5 32417102 32417210 -167212940 - L1ME4a LINE L1 -2448 3698 3589 1630 178 24 18 chr5 32417299 32417357 -167212793 - L1MD3 LINE L1 -2 7993 7937 1444 161 64 67 chr5 32417357 32417437 -167212713 - MER46B DNA MER2_type -2496 235 156 207 0 0 0 chr5 32417437 32417460 -167212690 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 357 24 0 0 chr5 32417459 32417501 -167212649 + (TA)n Simple_repeat Simple_repeat 1 42 0 1444 161 64 67 chr5 32417460 32417639 -167212511 - MER46B DNA MER2_type -2575 156 141 2792 19 0 0 chr5 32417639 32417950 -167212200 - AluYa5 SINE Alu 0 311 1 1444 161 64 67 chr5 32417950 32418091 -167212059 - MER46B DNA MER2_type -2590 141 1 1630 178 24 18 chr5 32418091 32418108 -167212042 - L1MD3 LINE L1 -58 7937 7922 2021 164 29 26 chr5 32418108 32418455 -167211695 - MER7A DNA MER2_type 0 346 1 1630 178 24 18 chr5 32418455 32418716 -167211434 - L1MD3 LINE L1 -73 7922 7654 2474 228 48 43 chr5 32418730 32419560 -167210590 + L1M4 LINE L1 3787 4620 -1526 719 204 68 37 chr5 32419580 32419771 -167210379 - L1MC4a LINE L1 -314 7494 7298 293 288 117 55 chr5 32420031 32420194 -167209956 + MIR SINE MIR 86 258 -4 566 281 81 94 chr5 32420413 32420564 -167209586 - MLT1J LTR MaLR -58 453 302 2926 13 0 0 chr5 32420564 32420880 -167209270 + AluYb8 SINE Alu 1 316 -2 566 281 81 94 chr5 32420880 32421187 -167208963 - MLT1J LTR MaLR -209 302 1 2230 105 0 0 chr5 32421411 32421746 -167208404 - AluSq SINE Alu 0 335 1 557 304 43 0 chr5 32422508 32422669 -167207481 + MIR SINE MIR 32 199 -63 246 286 14 14 chr5 32422933 32423003 -167207147 - L2 LINE L2 -3 3310 3241 256 335 92 49 chr5 32423160 32423261 -167206889 + L2 LINE L2 1862 1957 -1357 1062 153 89 11 chr5 32423261 32423451 -167206699 + MER3 DNA MER1_type 3 207 -2 256 335 92 49 chr5 32423451 32423859 -167206291 + L2 LINE L2 1957 2393 -921 336 192 55 89 chr5 32424018 32424164 -167205986 - L1ME4a LINE L1 -1 6120 5980 2435 100 0 0 chr5 32424550 32424860 -167205290 + AluSx SINE Alu 1 310 -2 226 146 21 21 chr5 32425509 32425557 -167204593 + MIR SINE MIR 215 262 0 463 284 35 14 chr5 32426379 32426520 -167203630 + MIR SINE MIR 81 224 -38 26 0 0 0 chr5 32426520 32426546 -167203604 + AT_rich Low_complexity Low_complexity 1 26 0 1998 58 17 0 chr5 32426739 32426979 -167203171 - L1PA7 LINE L1 0 6154 5911 1033 167 0 0 chr5 32428488 32428650 -167201500 - AluJb SINE Alu -19 293 132 229 337 43 11 chr5 32428778 32428870 -167201280 + MIR SINE MIR 21 115 -147 1286 146 82 63 chr5 32429119 32429434 -167200716 - MER33 DNA MER1_type 0 324 4 1945 151 3 3 chr5 32429738 32430029 -167200121 + AluJb SINE Alu 1 291 -21 23 33 0 0 chr5 32430253 32430283 -167199867 + AT_rich Low_complexity Low_complexity 1 30 0 665 186 65 0 chr5 32430367 32430491 -167199659 - FLAM_A SINE Alu -1 132 1 779 211 0 0 chr5 32430942 32431065 -167199085 + FLAM_A SINE Alu 1 123 -10 41 82 0 0 chr5 32431078 32431175 -167198975 + AT_rich Low_complexity Low_complexity 1 97 0 304 332 25 40 chr5 32431180 32431379 -167198771 - L1 LINE L1 -2000 4146 3951 1149 178 39 27 chr5 32431792 32432050 -167198100 - L1MD2 LINE L1 -3 6356 6096 337 185 67 74 chr5 32432052 32432187 -167197963 - L1 LINE L1 -2210 3936 3803 2405 99 0 0 chr5 32432591 32432895 -167197255 - AluSc SINE Alu -5 304 1 219 323 121 36 chr5 32432936 32433159 -167196991 + MIR SINE MIR 2 243 -19 444 282 77 89 chr5 32433301 32433549 -167196601 + L2 LINE L2 2993 3237 -35 198 118 0 0 chr5 32433566 32433600 -167196550 + (TTA)n Simple_repeat Simple_repeat 2 35 0 233 314 0 0 chr5 32433612 32433682 -167196468 - MIR3 SINE MIR -47 161 92 840 251 35 92 chr5 32435660 32436179 -167193971 - HAL1 LINE L1 -46 2461 1973 702 263 86 8 chr5 32436346 32436362 -167193788 - HAL1 LINE L1 -821 1686 1673 1823 169 7 0 chr5 32436362 32436657 -167193493 - AluJb SINE Alu -14 298 2 702 263 86 8 chr5 32436657 32436883 -167193267 - HAL1 LINE L1 -834 1673 1425 715 250 51 76 chr5 32436890 32437357 -167192793 - LTR33A LTR ERVL 0 523 1 878 211 87 26 chr5 32437428 32437694 -167192456 - HAL1 LINE L1 -1247 1260 979 507 254 17 28 chr5 32437701 32437878 -167192272 + MER104 DNA Tc2 6 180 0 1444 254 74 105 chr5 32437914 32438759 -167191391 - HAL1 LINE L1 -1539 968 155 1873 111 0 25 chr5 32438759 32439039 -167191111 - AluSx SINE Alu -39 273 1 1444 254 74 105 chr5 32439039 32439144 -167191006 - HAL1 LINE L1 -2352 155 48 2268 110 0 16 chr5 32440523 32440841 -167189309 + AluSq SINE Alu 1 313 0 198 0 0 0 chr5 32442210 32442232 -167187918 + (T)n Simple_repeat Simple_repeat 1 22 0 2436 67 0 0 chr5 32443444 32443741 -167186409 - AluY SINE Alu -14 297 1 241 298 43 11 chr5 32444290 32444384 -167185766 + L2 LINE L2 1992 2088 -1226 30008 45 2 1 chr5 32444387 32448635 -167181515 - L1PA5 LINE L1 -202 5952 1700 2919 219 64 32 chr5 32448613 32450362 -167179788 - L1ME2 LINE L1 -331 5767 636 * 7286 59 3 52 chr5 32450375 32451868 -167178282 - L1PA7 LINE L1 -2 6152 4698 1413 169 48 54 chr5 32451881 32452195 -167177955 - AluSx SINE Alu 0 312 1 512 278 46 45 chr5 32452198 32452494 -167177656 - L1ME2 LINE L1 -4932 769 498 682 287 69 75 chr5 32452637 32453087 -167177063 - L1ME2 LINE L1 -5539 531 83 2427 100 0 0 chr5 32453087 32453398 -167176752 + AluSq SINE Alu 1 311 -2 682 287 69 75 chr5 32453398 32453470 -167176680 - L1ME2 LINE L1 -5987 83 12 705 230 54 29 chr5 32454342 32454546 -167175604 - LTR33 LTR ERVL 0 521 313 401 213 90 25 chr5 32454657 32454779 -167175371 - LTR33 LTR ERVL -389 132 3 186 43 0 0 chr5 32455205 32455228 -167174922 + (TTA)n Simple_repeat Simple_repeat 2 24 0 272 257 92 18 chr5 32455942 32456051 -167174099 + MIR SINE MIR 144 260 -2 304 266 0 0 chr5 32456059 32456123 -167174027 - MER103 DNA DNA -95 71 8 2028 155 7 0 chr5 32458731 32459034 -167171116 + AluJb SINE Alu 1 305 -7 223 281 18 96 chr5 32459283 32459450 -167170700 + L3b LINE CR1 1276 1429 -154 607 286 108 9 chr5 32460787 32461000 -167169150 - MIR SINE MIR 0 262 29 496 281 29 7 chr5 32461314 32461453 -167168697 - MIR SINE MIR -19 243 102 403 316 60 24 chr5 32462370 32462538 -167167612 - MIR SINE MIR -13 249 76 316 182 15 15 chr5 32463550 32463616 -167166534 + MIR SINE MIR 158 223 -39 1957 112 0 8 chr5 32463877 32464145 -167166005 - AluSq SINE Alu -15 298 33 1947 121 0 4 chr5 32464176 32464441 -167165709 - AluSx SINE Alu -10 302 39 684 278 53 60 chr5 32464694 32465161 -167164989 - L1ME4a LINE L1 -166 5955 5492 1333 229 100 35 chr5 32465236 32465846 -167164304 - L2 LINE L2 0 3313 2662 315 232 184 24 chr5 32465898 32466023 -167164127 + MIR3 SINE MIR 47 191 -17 201 284 0 15 chr5 32468353 32468420 -167161730 + (TAA)n Simple_repeat Simple_repeat 2 67 0 629 256 23 17 chr5 32468442 32468618 -167161532 - MIR SINE MIR -50 212 36 233 163 0 0 chr5 32469842 32469885 -167160265 + MIR SINE MIR 111 153 -109 482 66 11 154 chr5 32470124 32470215 -167159935 + MADE1 DNA Mariner 3 80 0 462 245 68 62 chr5 32472305 32472497 -167157653 + MIR SINE MIR 18 210 -52 1753 143 8 0 chr5 32472775 32473033 -167157117 - AluSx SINE Alu -14 298 39 2131 122 10 16 chr5 32473721 32474033 -167156117 - AluSx SINE Alu -2 310 1 2250 109 3 0 chr5 32481312 32481606 -167148544 - AluSx SINE Alu -17 295 1 274 242 220 0 chr5 32481878 32481969 -167148181 + MIR SINE MIR 126 236 -26 250 329 14 36 chr5 32483165 32483305 -167146845 - MIR SINE MIR -7 255 119 31727 114 21 75 chr5 32483309 32488182 -167141968 + L1PA8A LINE L1 9 4430 -1701 360 0 0 0 chr5 32488182 32488222 -167141928 + (CA)n Simple_repeat Simple_repeat 1 40 0 31727 114 21 75 chr5 32488222 32489832 -167140318 + L1PA8A LINE L1 4430 6126 -5 334 191 15 15 chr5 32489861 32489929 -167140221 - MER116 DNA Mariner -12 68 1 2368 118 3 3 chr5 32490286 32490618 -167139532 - THE1B LTR MaLR -32 332 1 506 195 0 0 chr5 32490898 32490985 -167139165 - MIR SINE MIR -130 132 46 184 346 82 33 chr5 32491087 32491246 -167138904 + L2 LINE L2 2555 2732 -582 3225 161 78 19 chr5 32491246 32491824 -167138326 + LTR9 LTR ERV1 1 612 0 184 346 82 33 chr5 32491824 32491907 -167138243 + L2 LINE L2 2732 2809 -505 330 301 35 0 chr5 32492667 32492780 -167137370 + MIR SINE MIR 57 173 -89 640 149 0 0 chr5 32492978 32493072 -167137078 - LTR12 LTR ERV1 -133 581 488 345 221 71 71 chr5 32493072 32493199 -167136951 - LTR30 LTR ERV1 -67 655 553 791 117 0 209 chr5 32493286 32493516 -167136634 - LTR12 LTR ERV1 -480 234 53 265 231 0 0 chr5 32493516 32493568 -167136582 - LTR30 LTR ERV1 -670 52 1 536 222 142 12 chr5 32493693 32493855 -167136295 - MIR SINE MIR -70 192 10 1669 156 10 50 chr5 32494163 32494464 -167135686 - AluJb SINE Alu -23 289 1 1910 196 20 58 chr5 32495479 32495655 -167134495 - MER63B DNA MER1_type -631 431 250 6745 92 21 21 chr5 32495655 32496842 -167133308 - L1PA13 LINE L1 0 6163 4977 1910 196 20 58 chr5 32496842 32497113 -167133037 - MER63B DNA MER1_type -812 250 1 2159 111 7 7 chr5 32498080 32498378 -167131772 - AluSx SINE Alu -14 298 1 2458 87 0 0 chr5 32498711 32499010 -167131140 + AluSc SINE Alu 1 299 -10 823 255 17 62 chr5 32500600 32500890 -167129260 - L1MEd LINE L1 -5837 282 6 4390 158 8 12 chr5 32501799 32502520 -167127630 - L1MB2 LINE L1 -8 6163 5446 2732 84 14 0 chr5 32503535 32503880 -167126270 + THE1A LTR MaLR 3 352 -3 8858 88 9 2 chr5 32503883 32505050 -167125100 + THE1A-int LTR MaLR 1 1175 -405 180 0 0 0 chr5 32505354 32505374 -167124776 + (A)n Simple_repeat Simple_repeat 1 20 0 236 363 70 6 chr5 32505377 32505534 -167124616 - L2 LINE L2 -508 2806 2640 436 325 0 12 chr5 32505539 32505699 -167124451 - L2 LINE L2 -912 2402 2245 210 37 0 0 chr5 32505714 32505741 -167124409 + (GA)n Simple_repeat Simple_repeat 1 27 0 202 274 16 32 chr5 32505917 32505979 -167124171 + L3 LINE CR1 1515 1575 -2 1949 123 29 16 chr5 32506339 32506647 -167123503 - AluSx SINE Alu 0 312 1 1725 160 77 3 chr5 32506931 32507243 -167122907 + MER47A DNA MER2_type 1 335 -31 27 29 0 0 chr5 32507700 32507734 -167122416 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 32508490 32508520 -167121630 + AT_rich Low_complexity Low_complexity 1 30 0 384 294 0 0 chr5 32508815 32508924 -167121226 - MIR3 SINE MIR -12 196 88 2075 261 63 15 chr5 32509027 32509568 -167120582 - MLT1E LTR MaLR 0 593 27 394 311 60 38 chr5 32509646 32509829 -167120321 + L3 LINE CR1 569 755 -822 2126 203 73 13 chr5 32510602 32511080 -167119070 + MER92B LTR ERV1 5 511 -125 210 136 0 0 chr5 32511080 32511124 -167119026 + (T)n Simple_repeat Simple_repeat 1 44 0 11663 16 0 0 chr5 32511124 32513219 -167116931 - L1HS LINE L1 0 6155 4061 * 27608 36 38 2 chr5 32513211 32516589 -167113561 + L1HS LINE L1 576 4074 -2072 521 192 8 7 chr5 32516589 32516742 -167113408 + MER92B LTR ERV1 506 636 0 288 53 0 0 chr5 32517084 32517122 -167113028 + (TG)n Simple_repeat Simple_repeat 2 39 0 415 244 76 0 chr5 32517241 32517360 -167112790 + L3 LINE CR1 771 898 -679 371 200 0 24 chr5 32517389 32517474 -167112676 - MLT1K LTR MaLR 0 588 506 285 263 43 120 chr5 32518068 32518277 -167111873 + L3 LINE CR1 1062 1254 -323 1237 106 28 0 chr5 32518346 32518525 -167111625 - THE1C LTR MaLR -191 184 1 526 226 65 96 chr5 32519210 32519471 -167110679 - MER112 DNA MER1_type -7 253 1 183 80 0 0 chr5 32520327 32520352 -167109798 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 256 229 24 48 chr5 32521472 32521555 -167108595 + GA-rich Low_complexity Low_complexity 4 84 0 187 256 0 0 chr5 32521924 32521967 -167108183 + L2 LINE L2 3267 3309 -4 761 203 184 0 chr5 32523880 32524038 -167106112 + MER5A DNA MER1_type 1 187 -2 2479 51 3 10 chr5 32524210 32524521 -167105629 - AluY SINE Alu -1 310 2 240 243 0 0 chr5 32524566 32524640 -167105510 + CT-rich Low_complexity Low_complexity 4 77 0 611 258 74 93 chr5 32524657 32525075 -167105075 + MLT1K LTR MaLR 71 480 -108 399 269 131 3 chr5 32526437 32526594 -167103556 - MIR SINE MIR -56 206 34 225 295 137 0 chr5 32527585 32527680 -167102470 - MIR SINE MIR -49 213 106 982 131 91 11 chr5 32527948 32528123 -167102027 - MER53 DNA DNA 0 189 1 508 239 191 21 chr5 32528231 32528419 -167101731 + MIR SINE MIR 33 252 -10 222 239 0 15 chr5 32528485 32528552 -167101598 + (TA)n Simple_repeat Simple_repeat 2 67 0 180 219 0 0 chr5 32529159 32529200 -167100950 + CT-rich Low_complexity Low_complexity 5 45 0 776 160 0 16 chr5 32529332 32529457 -167100693 + FLAM_A SINE Alu 1 123 -10 2235 99 3 3 chr5 32529467 32529759 -167100391 + AluSq SINE Alu 1 292 -21 2238 79 14 0 chr5 32529824 32530115 -167100035 - AluY SINE Alu -16 295 1 826 272 105 8 chr5 32530493 32530732 -167099418 + MER45C DNA AcHobo 1 262 -691 554 271 93 73 chr5 32530808 32530931 -167099219 + MER45C DNA AcHobo 693 812 -769 1845 151 10 3 chr5 32530931 32531223 -167098927 + AluJo SINE Alu 1 294 -18 554 271 93 73 chr5 32531223 32531346 -167098804 + MER45C DNA AcHobo 812 944 -9 324 270 88 57 chr5 32534697 32534856 -167095294 + L2 LINE L2 2924 3087 -185 1216 305 35 13 chr5 32534950 32535347 -167094803 + LTR16A LTR ERVL 29 434 -16 344 270 36 80 chr5 32535358 32535495 -167094655 + L2 LINE L2 3140 3270 -2 519 213 43 130 chr5 32535681 32535911 -167094239 - LTR33 LTR ERVL -11 510 301 641 155 8 0 chr5 32536981 32537110 -167093040 + CT-rich Low_complexity Low_complexity 3 132 0 650 286 94 28 chr5 32537124 32537379 -167092771 - L2 LINE L2 0 3313 3042 772 269 115 45 chr5 32537616 32538396 -167091754 + L2 LINE L2 2458 3301 -12 211 194 0 0 chr5 32538433 32538469 -167091681 + (CA)n Simple_repeat Simple_repeat 2 37 0 1468 192 2 86 chr5 32538547 32538943 -167091207 + MLT1A2 LTR MaLR 1 363 -11 310 167 36 12 chr5 32539577 32539661 -167090489 - L1MA4A LINE L1 -27 6276 6191 279 333 78 13 chr5 32539699 32539852 -167090298 + MIR SINE MIR 78 240 -22 377 242 223 40 chr5 32541450 32541691 -167088459 + Charlie8 DNA MER1_type 1 275 -2142 471 170 94 9 chr5 32541860 32541966 -167088184 + MIR SINE MIR 124 238 -24 223 289 52 41 chr5 32542116 32542213 -167087937 - L2 LINE L2 -1 3271 3174 397 225 38 0 chr5 32542411 32542491 -167087659 + MER63 DNA MER1_type 44 752 -84 284 256 78 0 chr5 32542604 32542709 -167087441 - MIR SINE MIR -58 150 38 1416 259 84 30 chr5 32542767 32543337 -167086813 + HAL1 LINE L1 1658 2267 -240 243 0 0 0 chr5 32543337 32543364 -167086786 + (TG)n Simple_repeat Simple_repeat 1 27 0 1416 259 84 30 chr5 32543364 32543426 -167086724 + HAL1 LINE L1 2267 2324 -183 246 219 27 0 chr5 32543496 32543569 -167086581 + L1MC/D LINE L1 5211 5285 -861 * 798 198 0 21 chr5 32543556 32543748 -167086402 + L1 LINE L1 4507 4694 -1452 324 293 90 0 chr5 32543862 32544066 -167086084 + L1MC/D LINE L1 5263 5481 -689 1789 167 16 29 chr5 32544091 32544469 -167085681 - L1MB2 LINE L1 -14 6157 5785 562 102 18 73 chr5 32544473 32544823 -167085327 + (TATAA)n Simple_repeat Simple_repeat 1 330 0 3817 110 5 90 chr5 32547331 32548251 -167081899 - L1P LINE L1 -3242 2904 2063 4767 224 50 16 chr5 32548496 32549849 -167080301 - L1 LINE L1 -1895 4251 2853 266 176 40 0 chr5 32550097 32550171 -167079979 + L1P LINE L1 4618 4694 -1452 391 297 61 38 chr5 32550279 32550491 -167079659 + L1MC/D LINE L1 5265 5481 -2327 1789 167 16 29 chr5 32550516 32550894 -167079256 - L1MB2 LINE L1 -14 6157 5785 457 152 47 0 chr5 32550930 32551101 -167079049 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 464 152 42 0 chr5 32551114 32551279 -167078871 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 419 236 17 22 chr5 32551326 32551504 -167078646 + (CATATA)n Simple_repeat Simple_repeat 2 178 0 5931 199 19 14 chr5 32551506 32553344 -167076806 - L1MB2 LINE L1 -378 5793 3952 337 328 37 21 chr5 32553394 32553583 -167076567 + L1MC/D LINE L1 5560 5751 -2057 11802 197 39 9 chr5 32553616 32555319 -167074831 - L1PA16 LINE L1 -9 6157 4508 240 35 0 0 chr5 32555319 32555348 -167074802 + (TG)n Simple_repeat Simple_repeat 2 30 0 11802 197 39 9 chr5 32555348 32557400 -167072750 - L1PA16 LINE L1 -1658 4508 2291 442 265 141 18 chr5 32557597 32557767 -167072383 - MIR SINE MIR -70 192 2 2206 114 7 0 chr5 32557876 32558175 -167071975 + AluSx SINE Alu 1 301 -11 776 194 92 20 chr5 32558380 32558576 -167071574 - MER6B DNA MER2_type 0 210 1 221 178 0 22 chr5 32559403 32559448 -167070702 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 362 247 12 0 chr5 32559478 32559559 -167070591 - L2 LINE L2 -37 3235 3154 442 248 26 9 chr5 32561126 32561239 -167068911 + MIR3 SINE MIR 82 196 -12 984 239 0 0 chr5 32561578 32561766 -167068384 - MER5A DNA MER1_type -1 188 1 445 259 161 0 chr5 32562065 32562177 -167067973 - MER45A DNA AcHobo -45 133 4 26 30 0 0 chr5 32562412 32562445 -167067705 + AT_rich Low_complexity Low_complexity 1 33 0 279 390 21 0 chr5 32562455 32562550 -167067600 + L2 LINE L2 3154 3250 -22 217 294 39 0 chr5 32562785 32562836 -167067314 + MIR SINE MIR 20 72 -190 352 333 22 7 chr5 32563247 32563385 -167066765 - Charlie8 DNA MER1_type -2277 140 1 975 224 25 57 chr5 32563645 32563926 -167066224 - MLT1A2 LTR MaLR -102 272 1 705 326 89 59 chr5 32564284 32565197 -167064953 - L2 LINE L2 -495 2819 1880 241 276 8 73 chr5 32567114 32567237 -167062913 - MIR SINE MIR -16 246 132 293 237 26 13 chr5 32567257 32567333 -167062817 + MIR3 SINE MIR 115 191 -17 2218 140 5 60 chr5 32567523 32567762 -167062388 - MLT1B LTR MaLR 0 390 182 2258 129 27 16 chr5 32567762 32568133 -167062017 + THE1C LTR MaLR 1 375 0 2218 140 5 60 chr5 32568133 32568306 -167061844 - MLT1B LTR MaLR -208 182 1 429 302 7 4 chr5 32568339 32568496 -167061654 - MIR3 SINE MIR -64 144 4 24 53 0 0 chr5 32569419 32569457 -167060693 + AT_rich Low_complexity Low_complexity 1 38 0 239 247 39 0 chr5 32570760 32570837 -167059313 - L1M4 LINE L1 -876 5270 5191 1744 109 37 56 chr5 32570852 32570976 -167059174 - L1MA5A LINE L1 -3 6936 6811 1738 108 119 4 chr5 32570976 32571236 -167058914 - AluSq SINE Alu -23 290 1 1744 109 37 56 chr5 32571236 32571432 -167058718 - L1MA5A LINE L1 -128 6811 6622 1668 131 4 69 chr5 32571434 32571854 -167058296 + MER1B DNA MER1_type 1 339 0 4243 139 19 16 chr5 32571854 32573224 -167056926 - L1MA5A LINE L1 -312 6627 5249 422 49 16 0 chr5 32573226 32573287 -167056863 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 7051 58 0 0 chr5 32573409 32574883 -167055267 + L1PA6 LINE L1 4685 6161 0 1322 201 63 26 chr5 32574904 32575173 -167054977 - AluJo SINE Alu -30 282 4 11417 183 23 17 chr5 32575175 32577600 -167052550 - L1MA5A LINE L1 -1532 5256 2818 765 187 0 29 chr5 32577617 32577756 -167052394 - FLAM_C SINE Alu -8 135 1 2158 188 39 0 chr5 32577761 32578203 -167051947 - L1MA5A LINE L1 -3962 2827 2369 6041 153 21 14 chr5 32578377 32579458 -167050692 - L1MA5A LINE L1 -4455 2334 1246 797 196 77 0 chr5 32579461 32579655 -167050495 - L1M4 LINE L1 -960 5186 4978 1444 236 40 9 chr5 32579656 32580004 -167050146 - MLT1A2 LTR MaLR -4 370 12 2681 216 14 14 chr5 32580015 32580622 -167049528 - L1M4 LINE L1 -1161 4985 4376 2360 86 0 29 chr5 32580622 32580937 -167049213 - AluY SINE Alu -5 306 1 2681 216 14 14 chr5 32580937 32580985 -167049165 - L1M4 LINE L1 -1769 4377 4330 21 71 0 0 chr5 32581042 32581084 -167049066 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr5 32581171 32581193 -167048957 + AT_rich Low_complexity Low_complexity 1 22 0 380 311 71 39 chr5 32581522 32581734 -167048416 + MIR SINE MIR 18 247 -15 300 255 0 41 chr5 32583488 32583586 -167046564 - MLT1I LTR MaLR -6 403 310 263 200 0 0 chr5 32583582 32583627 -167046523 - MLT1J1 LTR MaLR -136 310 266 * 314 283 42 25 chr5 32583715 32583835 -167046315 - MLT1J2 LTR MaLR -306 144 23 1020 290 127 20 chr5 32583908 32584424 -167045726 + L2 LINE L2 2739 3313 0 1865 228 64 19 chr5 32584708 32585218 -167044932 + MLT1F LTR MaLR 1 555 0 293 241 0 38 chr5 32585320 32585399 -167044751 - 7SK RNA RNA -116 77 2 191 359 0 43 chr5 32586257 32586349 -167043801 - L3b LINE CR1 -141 1442 1355 30144 111 10 59 chr5 32587872 32594334 -167035816 - L1PA7 LINE L1 -4 6150 12 21 0 0 0 chr5 32594642 32594663 -167035487 + AT_rich Low_complexity Low_complexity 1 21 0 2185 148 13 24 chr5 32594846 32595225 -167034925 - THE1C LTR MaLR 0 375 1 4098 159 126 33 chr5 32595230 32596614 -167033536 - THE1C-int LTR MaLR -5 1646 2 2225 119 16 49 chr5 32596615 32597001 -167033149 - THE1C LTR MaLR 0 375 3 274 289 99 60 chr5 32597181 32597349 -167032801 - LTR16C LTR ERVL -61 430 249 1036 230 5 0 chr5 32597349 32597571 -167032579 + MER58A DNA MER1_type 2 224 0 274 289 99 60 chr5 32597571 32597634 -167032516 - LTR16C LTR ERVL -242 249 190 612 266 192 6 chr5 32597894 32598283 -167031867 - L2 LINE L2 -2 3311 2705 240 237 18 53 chr5 32598285 32598298 -167031852 - L1MA10 LINE L1 0 6334 6322 2181 249 58 50 chr5 32598298 32599825 -167030325 - L1ME3 LINE L1 -1 6230 4700 435 259 89 19 chr5 32600052 32600369 -167029781 - L1ME3 LINE L1 -4551 1664 1441 314 338 89 67 chr5 32600411 32600937 -167029213 - L1ME3 LINE L1 -5551 845 308 390 288 12 35 chr5 32600985 32601155 -167028995 - L1ME3 LINE L1 -6194 202 37 2017 291 18 3 chr5 32601171 32601737 -167028413 - L2 LINE L2 -612 2702 2129 7123 55 5 70 chr5 32602145 32603298 -167026852 - L1PA6 LINE L1 -1 6153 5027 444 209 8 47 chr5 32604019 32604148 -167026002 + L1MC4 LINE L1 7797 7920 -122 263 250 15 0 chr5 32604151 32604219 -167025931 + GA-rich Low_complexity Low_complexity 2 70 0 180 200 0 0 chr5 32604327 32604367 -167025783 + (CA)n Simple_repeat Simple_repeat 1 40 0 352 265 11 119 chr5 32605093 32605278 -167024872 - MER5A DNA MER1_type -7 182 18 185 333 20 88 chr5 32605275 32605422 -167024728 - L2 LINE L2 -2 3270 3134 * 509 279 181 24 chr5 32605494 32605748 -167024402 - L2 LINE L2 -7 3306 3013 259 284 0 49 chr5 32605871 32605952 -167024198 + L2 LINE L2 3237 3313 0 2342 27 0 0 chr5 32606307 32606601 -167023549 - L1PA2 LINE L1 -995 5151 4858 * 4817 12 1 0 chr5 32606595 32607299 -167022851 + L1PA2 LINE L1 5125 5829 -326 2857 12 0 0 chr5 32607415 32607764 -167022386 + L1PA2 LINE L1 5833 6181 0 2619 191 17 65 chr5 32607902 32608545 -167021605 + LTR9 LTR ERV1 1 612 0 996 214 38 47 chr5 32608565 32608882 -167021268 + LTR9 LTR ERV1 299 612 0 3942 143 18 10 chr5 32609823 32610528 -167019622 + MER50 LTR ERV1 1 711 -23 234 352 21 4 chr5 32610926 32611047 -167019103 - MIR SINE MIR -67 141 32 234 313 38 0 chr5 32611371 32611451 -167018699 + MIR SINE MIR 64 146 -62 6218 87 11 2 chr5 32612920 32614220 -167015930 - L1PA12 LINE L1 -1 6167 4855 1011 179 10 0 chr5 32614223 32614430 -167015720 + L1PA12 LINE L1 4644 4852 -1294 21 0 0 0 chr5 32615214 32615235 -167014915 + AT_rich Low_complexity Low_complexity 1 21 0 2069 237 86 28 chr5 32615379 32615488 -167014662 - L1MB7 LINE L1 -16 6168 6067 2138 136 0 7 chr5 32615488 32615790 -167014360 - AluSx SINE Alu -12 300 1 2069 237 86 28 chr5 32615790 32617121 -167013029 - L1MB7 LINE L1 -117 6067 4631 688 71 0 0 chr5 32617121 32617220 -167012930 - L1PB1 LINE L1 0 6151 6053 2069 237 86 28 chr5 32617220 32617360 -167012790 - L1MB7 LINE L1 -1553 4631 4501 * 2895 33 0 0 chr5 32617358 32617721 -167012429 + L1P LINE L1 3547 3909 -2237 814 169 0 0 chr5 32617801 32617925 -167012225 - AluSq/x SINE Alu -188 124 1 928 224 72 63 chr5 32617926 32618399 -167011751 - L1MB7 LINE L1 -1661 4485 4009 345 282 68 26 chr5 32618399 32618516 -167011634 - L1MCa LINE L1 -4050 2376 2255 512 281 25 51 chr5 32618743 32619096 -167011054 + L1M4 LINE L1 4890 5233 -913 1624 35 19 47 chr5 32619534 32619790 -167010360 + L1PA2 LINE L1 5907 6155 0 204 67 0 0 chr5 32619804 32619834 -167010316 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 30 0 0 0 chr5 32620144 32620174 -167009976 + AT_rich Low_complexity Low_complexity 1 30 0 440 217 217 15 chr5 32620212 32620415 -167009735 - L1ME2 LINE L1 -9 6155 5912 224 277 26 77 chr5 32620660 32620790 -167009360 + MIR SINE MIR 26 144 -64 364 200 13 0 chr5 32621170 32621245 -167008905 - MER69 DNA AcHobo 0 2526 2451 * 588 229 36 7 chr5 32621243 32621383 -167008767 - MER69 DNA AcHobo -1079 147 4 1262 146 4 34 chr5 32622973 32623206 -167006944 - AluJb SINE Alu -2 310 85 3228 56 5 12 chr5 32623494 32623921 -167006229 - L1PA4 LINE L1 0 6155 5732 23 33 0 0 chr5 32624083 32624113 -167006037 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr5 32624139 32624163 -167005987 + AT_rich Low_complexity Low_complexity 1 24 0 1625 153 57 45 chr5 32624198 32624531 -167005619 - MER44D DNA MER2_type -2 607 1 213 312 128 37 chr5 32624817 32624926 -167005224 + L2 LINE L2 3153 3271 -1 375 321 170 0 chr5 32625520 32625679 -167004471 + L3 LINE CR1 334 519 -1058 337 287 35 21 chr5 32625719 32625862 -167004288 - L1ME3A LINE L1 -15 6155 6011 926 295 46 34 chr5 32625956 32626430 -167003720 - L1ME3A LINE L1 -208 5962 5483 5153 31 5 2 chr5 32626536 32627630 -167002520 - L1PA4 LINE L1 -260 5895 4796 374 306 30 17 chr5 32627631 32627928 -167002222 + L1M4 LINE L1 2522 2822 -3324 573 254 8 8 chr5 32628326 32628460 -167001690 - MIR SINE MIR -67 195 62 446 294 25 6 chr5 32630240 32630403 -166999747 - MARNA DNA Mariner -13 573 408 24 0 0 0 chr5 32630449 32630473 -166999677 + AT_rich Low_complexity Low_complexity 1 24 0 214 286 86 0 chr5 32630710 32630780 -166999370 - L2 LINE L2 -9 3263 3188 342 280 30 15 chr5 32630789 32630921 -166999229 - MARNA DNA Mariner -368 218 85 417 237 38 15 chr5 32631057 32631188 -166998962 - MER94 DNA DNA 0 134 1 805 257 22 6 chr5 32631480 32631663 -166998487 + MIR SINE MIR 16 201 -61 251 337 93 54 chr5 32631798 32632003 -166998147 - L2 LINE L2 -43 3229 3017 3721 42 0 19 chr5 32632105 32632577 -166997573 - L1PA5 LINE L1 -1 6153 5691 2196 91 0 17 chr5 32632578 32632865 -166997285 - AluY SINE Alu -29 282 1 247 278 28 65 chr5 32634259 32634367 -166995783 - MIR SINE MIR -11 251 148 1838 129 0 58 chr5 32635003 32635161 -166994989 - AluJo SINE Alu -21 291 158 2249 110 0 7 chr5 32635161 32635461 -166994689 - AluSq SINE Alu -13 300 3 1838 129 0 58 chr5 32635461 32635611 -166994539 - AluJo SINE Alu -154 158 1 272 340 0 10 chr5 32635639 32635736 -166994414 - MIR3 SINE MIR -9 199 104 536 341 44 6 chr5 32635896 32636078 -166994072 - MIR3 SINE MIR -12 196 8 2043 123 68 0 chr5 32636750 32637042 -166993108 + AluSx SINE Alu 1 312 0 393 159 0 0 chr5 32637068 32637137 -166993013 + L1MA9 LINE L1 6239 6307 -5 2458 170 29 0 chr5 32637147 32637630 -166992520 + L1MB7 LINE L1 5661 6157 -27 465 161 92 0 chr5 32637747 32637877 -166992273 + L1MB7 LINE L1 6032 6173 -11 272 158 18 0 chr5 32637877 32637934 -166992216 + GA-rich Low_complexity Low_complexity 5 62 0 822 153 6 12 chr5 32637945 32638115 -166992035 + GA-rich Low_complexity Low_complexity 2 170 0 661 267 148 18 chr5 32638305 32638582 -166991568 - L2 LINE L2 -2 3311 2999 638 279 98 80 chr5 32639024 32639537 -166990613 - LTR33A LTR ERVL 0 523 2 314 335 30 55 chr5 32639580 32639780 -166990370 - MIR SINE MIR -19 243 49 205 182 0 0 chr5 32639820 32639864 -166990286 + (TA)n Simple_repeat Simple_repeat 1 44 0 890 189 0 30 chr5 32639898 32640062 -166990088 - AluJb SINE Alu -18 294 136 1598 165 3 49 chr5 32640066 32640393 -166989757 - AluJb SINE Alu 0 312 1 2380 89 0 3 chr5 32641082 32641384 -166988766 - AluSg SINE Alu -9 301 1 26 30 0 0 chr5 32641410 32641443 -166988707 + AT_rich Low_complexity Low_complexity 1 33 0 2627 58 0 0 chr5 32641443 32641772 -166988378 - L1PA4 LINE L1 -3 6152 5824 1843 187 56 58 chr5 32642194 32642696 -166987454 + MLT1D LTR MaLR 5 505 0 2379 82 0 16 chr5 32642758 32643074 -166987076 + AluY SINE Alu 1 311 0 624 284 100 38 chr5 32643084 32643404 -166986746 - MLT1J2 LTR MaLR -1 449 110 653 220 41 86 chr5 32643454 32643745 -166986405 + MLT1D LTR MaLR 5 282 -223 464 216 32 16 chr5 32643744 32643869 -166986281 - MLT1J2 LTR MaLR -323 127 1 * 236 291 0 0 chr5 32644013 32644102 -166986048 + MIR SINE MIR 79 166 -74 282 208 39 0 chr5 32644277 32644354 -166985796 - MER116 DNA Mariner 0 80 1 515 240 71 39 chr5 32644493 32644647 -166985503 + L2 LINE L2 3154 3312 -1 363 330 98 15 chr5 32644978 32645181 -166984969 - L3b LINE CR1 -80 1503 1284 21 0 0 0 chr5 32645634 32645655 -166984495 + AT_rich Low_complexity Low_complexity 1 21 0 1115 60 13 0 chr5 32647245 32647395 -166982755 + MER4E LTR ERV1 1 152 -627 2749 158 91 24 chr5 32647395 32647969 -166982181 - LTR9 LTR ERV1 0 612 1 * 3456 137 39 30 chr5 32647969 32648590 -166981560 + MER4E LTR ERV1 153 779 0 1536 139 35 4 chr5 32649758 32650016 -166980134 - Tigger4(Zombi) DNA MER2_type 0 2731 2466 196 336 104 32 chr5 32650325 32650545 -166979605 - L3b LINE CR1 -226 1357 1122 699 267 208 24 chr5 32650910 32651329 -166978821 - L2 LINE L2 -1625 1689 1194 5648 81 20 44 chr5 32651837 32652341 -166977809 - L1PA12 LINE L1 -1 6167 5693 2200 115 0 0 chr5 32652341 32652629 -166977521 - AluSx SINE Alu -23 289 2 5648 81 20 44 chr5 32652629 32653028 -166977122 - L1PA12 LINE L1 -475 5693 5286 196 315 82 0 chr5 32653673 32653746 -166976404 + L2 LINE L2 2768 2846 -468 24 67 0 0 chr5 32653940 32653985 -166976165 + AT_rich Low_complexity Low_complexity 1 45 0 1917 158 39 34 chr5 32654481 32654866 -166975284 - MLT1B LTR MaLR -2 388 2 1421 234 31 45 chr5 32657655 32658073 -166972077 + MER92A LTR ERV1 1 412 0 939 284 82 0 chr5 32658073 32658425 -166971725 + L1ME3A LINE L1 5787 6167 -3 188 0 74 0 chr5 32658591 32658618 -166971532 + (TTTAA)n Simple_repeat Simple_repeat 5 33 0 2399 154 34 10 chr5 32658703 32659119 -166971031 - MSTB LTR MaLR 0 426 1 194 341 91 17 chr5 32659758 32659934 -166970216 - L2 LINE L2 -605 2709 2521 186 301 75 60 chr5 32660169 32660302 -166969848 + L2 LINE L2 3171 3305 -8 1459 247 79 69 chr5 32660344 32661262 -166968888 - L1MEc LINE L1 -2921 3294 2413 2733 187 52 9 chr5 32661262 32661802 -166968348 - MLT1F1 LTR MaLR -4 563 1 1459 247 79 69 chr5 32661802 32662050 -166968100 - L1MEc LINE L1 -3802 2413 2169 21 0 0 0 chr5 32662371 32662392 -166967758 + AT_rich Low_complexity Low_complexity 1 21 0 350 315 101 11 chr5 32662454 32662632 -166967518 - MIR SINE MIR -62 200 7 465 53 0 149 chr5 32663426 32663465 -166966685 + MADE1 DNA Mariner 1 20 -60 2395 90 3 0 chr5 32663465 32663766 -166966384 - AluSx SINE Alu -10 302 1 465 53 0 149 chr5 32663766 32663820 -166966330 + MADE1 DNA Mariner 20 80 0 1932 161 33 19 chr5 32665434 32665794 -166964356 - MLT1A1 LTR MaLR 0 365 1 411 247 19 56 chr5 32666071 32666233 -166963917 + MLT1D LTR MaLR 1 156 -349 348 167 28 0 chr5 32666232 32666304 -166963846 - MLT1F1 LTR MaLR -470 97 24 * 306 170 0 0 chr5 32666322 32666375 -166963775 - MLT1F1 LTR MaLR -52 415 363 572 160 20 0 chr5 32666379 32666479 -166963671 - MLT1F1 LTR MaLR -377 190 89 209 83 28 0 chr5 32666821 32666857 -166963293 + (CAAAA)n Simple_repeat Simple_repeat 5 41 0 2579 131 9 14 chr5 32667061 32667490 -166962660 - L1M1 LINE L1 -508 5797 5371 195 340 189 0 chr5 32668534 32668640 -166961510 + L2 LINE L2 3141 3266 -6 301 260 158 63 chr5 32669524 32669651 -166960499 + MIR SINE MIR 47 185 -77 1583 212 11 8 chr5 32672160 32672518 -166957632 - L1MC1 LINE L1 0 6333 5975 930 214 79 38 chr5 32672690 32673133 -166957017 - L1M4 LINE L1 -1548 4598 4138 1058 243 71 58 chr5 32673246 32673835 -166956315 - L1M4 LINE L1 -2446 3700 3104 906 184 7 0 chr5 32674284 32674431 -166955719 - FRAM SINE Alu -23 153 6 1448 198 0 11 chr5 32674437 32674700 -166955450 - AluJo SINE Alu -13 299 40 207 0 0 0 chr5 32674701 32674724 -166955426 + (A)n Simple_repeat Simple_repeat 1 23 0 770 167 0 8 chr5 32674745 32674877 -166955273 - FLAM_C SINE Alu -2 131 1 217 163 0 20 chr5 32674885 32674934 -166955216 + T-rich Low_complexity Low_complexity 1 48 0 354 155 206 21 chr5 32676072 32676169 -166953981 - MIR SINE MIR -58 204 90 3606 142 43 64 chr5 32676610 32677393 -166952757 - L1MC2 LINE L1 0 6344 5578 255 206 0 0 chr5 32677393 32677456 -166952694 + L1M4 LINE L1 4408 4470 -1676 1359 188 20 112 chr5 32677462 32677961 -166952189 - L1MC2 LINE L1 -1709 4437 3985 2652 7 3 10 chr5 32678636 32678934 -166951216 - AluYa5 SINE Alu -15 296 1 304 285 36 29 chr5 32679424 32679561 -166950589 - L1M4 LINE L1 -1037 5109 4972 2909 155 38 4 chr5 32679561 32680152 -166949998 + MER4B LTR ERV1 1 779 0 1150 259 46 35 chr5 32680152 32680235 -166949915 - L1M4 LINE L1 -1171 4975 4894 2216 63 30 20 chr5 32680235 32680534 -166949616 + AluY SINE Alu 1 302 -9 1150 259 46 35 chr5 32680534 32680990 -166949160 - L1M4 LINE L1 -1252 4894 4430 265 298 0 18 chr5 32681061 32681118 -166949032 - L2 LINE L2 -69 3203 3148 956 216 168 17 chr5 32681691 32681717 -166948433 - L1MC4 LINE L1 -21 8021 8000 2483 156 24 5 chr5 32681717 32682135 -166948015 + MSTB LTR MaLR 1 426 0 956 216 168 17 chr5 32682135 32682465 -166947685 - L1MC4 LINE L1 -42 8000 7611 741 162 48 79 chr5 32682939 32683133 -166947017 + LTR1B LTR ERV1 1 188 -638 312 102 0 0 chr5 32683133 32683182 -166946968 + (CA)n Simple_repeat Simple_repeat 2 50 0 741 162 48 79 chr5 32683182 32683216 -166946934 + LTR1B LTR ERV1 188 222 -604 36 70 0 0 chr5 32683800 32683871 -166946279 + AT_rich Low_complexity Low_complexity 1 71 0 1711 162 21 18 chr5 32683872 32684205 -166945945 - L1PA16 LINE L1 -18 6148 5815 448 125 0 0 chr5 32684198 32684278 -166945872 - L1 LINE L1 -1519 4627 4548 * 1665 142 7 84 chr5 32684273 32684689 -166945461 - L1PA16 LINE L1 -337 5819 5436 3013 165 45 13 chr5 32684689 32685398 -166944752 - L1 LINE L1 -863 5283 4552 623 239 63 9 chr5 32685498 32685720 -166944430 - L1MEc LINE L1 -3150 3065 2832 * 830 244 121 20 chr5 32685719 32686109 -166944041 - L1MEc LINE L1 -4233 2163 1735 371 278 91 62 chr5 32686137 32686655 -166943495 - L1MEc LINE L1 -4761 1635 1103 1198 268 127 43 chr5 32686711 32686866 -166943284 - L1MEc LINE L1 -5426 970 829 2098 132 0 0 chr5 32686866 32687155 -166942995 - AluSx SINE Alu -15 297 9 1198 268 127 43 chr5 32687155 32687679 -166942471 - L1MEc LINE L1 -5567 829 234 581 161 48 151 chr5 32688921 32689212 -166940938 - LTR33A LTR ERVL -37 486 226 440 266 66 73 chr5 32689189 32689294 -166940856 - LTR33A LTR ERVL -239 284 180 * 357 24 0 0 chr5 32689294 32689336 -166940814 + (TG)n Simple_repeat Simple_repeat 2 43 0 440 266 66 73 chr5 32689336 32689516 -166940634 - LTR33A LTR ERVL -343 180 1 584 61 0 12 chr5 32689670 32689752 -166940398 + (TGGA)n Simple_repeat Simple_repeat 2 82 0 1484 146 22 4 chr5 32690510 32690785 -166939365 + L1MC3 LINE L1 7485 7764 -21 233 214 18 0 chr5 32690857 32690913 -166939237 - Charlie4 DNA MER1_type 0 1961 1905 360 273 14 50 chr5 32691092 32691149 -166939001 + MER94 DNA DNA 1 59 -75 1938 97 7 37 chr5 32691149 32691449 -166938701 + AluY SINE Alu 2 292 -19 360 273 14 50 chr5 32691449 32691530 -166938620 + MER94 DNA DNA 59 134 0 5126 113 16 5 chr5 32691923 32692840 -166937310 - L1PB1 LINE L1 -108 6043 5116 2238 120 47 3 chr5 32693562 32693945 -166936205 - L1MA6 LINE L1 -351 5949 5550 617 322 172 30 chr5 32694243 32694836 -166935314 + L3 LINE CR1 845 1521 -56 24 0 0 0 chr5 32694942 32694966 -166935184 + AT_rich Low_complexity Low_complexity 1 24 0 280 341 48 16 chr5 32695659 32695785 -166934365 - MIR SINE MIR -62 146 17 186 43 0 0 chr5 32696074 32696097 -166934053 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 867 227 115 38 chr5 32696492 32696945 -166933205 - L1M1 LINE L1 -3975 3590 3103 778 141 22 87 chr5 32696947 32697131 -166933019 + Tigger4(Zombi) DNA MER2_type 1 172 -2559 3172 103 33 33 chr5 32697135 32697687 -166932463 + Tigger4(Zombi) DNA MER2_type 2180 2731 0 1967 258 47 18 chr5 32697722 32698517 -166931633 - L1M2 LINE L1 -4172 2039 1212 921 259 116 19 chr5 32701055 32701476 -166928674 + LTR16B LTR ERVL 3 464 0 862 124 7 36 chr5 32702608 32702745 -166927405 + AluJb SINE Alu 1 133 -179 564 265 94 36 chr5 32702783 32703006 -166927144 - MIR SINE MIR -25 237 2 1454 102 57 4 chr5 32704024 32704269 -166925881 + AluY SINE Alu 1 258 -53 468 223 129 77 chr5 32704415 32704648 -166925502 + LTR28 LTR ERV1 582 1019 0 191 372 13 0 chr5 32704874 32704952 -166925198 + L2 LINE L2 2454 2532 -782 3871 261 71 48 chr5 32704972 32705901 -166924249 + L1MEc LINE L1 29 935 -5461 2125 131 0 0 chr5 32705901 32706198 -166923952 + AluSq SINE Alu 1 297 -16 3871 261 71 48 chr5 32706198 32707187 -166922963 + L1MEc LINE L1 935 1991 -4405 5115 226 65 60 chr5 32707247 32709012 -166921138 + L1M4 LINE L1 87 1936 -4710 2335 73 0 0 chr5 32709012 32709301 -166920849 + AluY SINE Alu 17 305 -6 5115 226 65 60 chr5 32709301 32710004 -166920146 + L1M4 LINE L1 1936 2634 -4012 1100 117 166 54 chr5 32710000 32710026 -166920124 + L1M2 LINE L1 5144 5166 -1131 * 293 47 23 0 chr5 32710026 32710069 -166920081 + (CAA)n Simple_repeat Simple_repeat 3 46 0 1100 117 166 54 chr5 32710069 32710528 -166919622 + L1M2 LINE L1 5166 5670 -627 2747 229 75 10 chr5 32710763 32711801 -166918349 - L1M2 LINE L1 -4986 1155 1 299 311 126 40 chr5 32712229 32712451 -166917699 + LTR33A LTR ERVL 61 301 -222 1855 192 156 0 chr5 32713053 32713490 -166916660 + MLT1D LTR MaLR 1 505 0 325 227 10 41 chr5 32714043 32714140 -166916010 + CT-rich Low_complexity Low_complexity 2 95 0 1742 192 10 10 chr5 32714466 32714778 -166915372 - AluJo SINE Alu 0 312 1 21 0 0 0 chr5 32714889 32714910 -166915240 + AT_rich Low_complexity Low_complexity 1 21 0 7185 31 16 2 chr5 32715530 32716806 -166913344 + L1PA3 LINE L1 4868 6155 0 208 278 111 0 chr5 32717445 32717517 -166912633 + MIR SINE MIR 63 142 -120 23 33 0 0 chr5 32718256 32718286 -166911864 + AT_rich Low_complexity Low_complexity 1 30 0 336 299 277 11 chr5 32718323 32718594 -166911556 + L1MEd LINE L1 27 369 -5750 24 67 0 0 chr5 32718601 32718646 -166911504 + AT_rich Low_complexity Low_complexity 1 45 0 973 204 51 37 chr5 32718777 32718993 -166911157 - AluJo SINE Alu -21 291 73 562 286 49 30 chr5 32719338 32719541 -166910609 - MIR SINE MIR -21 241 35 24 0 0 0 chr5 32719949 32719973 -166910177 + AT_rich Low_complexity Low_complexity 1 24 0 1229 134 15 5 chr5 32720693 32720894 -166909256 + MER20 DNA MER1_type 17 219 0 752 228 73 45 chr5 32721235 32721565 -166908585 - MSTD LTR MaLR 0 396 21 2098 222 32 5 chr5 32721681 32722122 -166908028 - MSTD-int LTR MaLR -170 1565 1113 378 187 0 0 chr5 32722136 32722211 -166907939 - MSTC LTR MaLR -353 75 1 22 0 0 0 chr5 32722763 32722785 -166907365 + AT_rich Low_complexity Low_complexity 1 22 0 256 310 17 26 chr5 32722940 32723056 -166907094 - L2 LINE L2 -248 3065 2951 387 258 25 8 chr5 32723092 32723212 -166906938 - MER117 DNA MER1_type -42 155 34 5837 214 14 21 chr5 32723539 32725385 -166904765 + L1HS LINE L1 3981 5789 -362 495 0 0 0 chr5 32725385 32725440 -166904710 + (TA)n Simple_repeat Simple_repeat 2 56 0 5837 214 14 21 chr5 32725440 32725800 -166904350 + L1HS LINE L1 5789 6150 -1 194 296 14 0 chr5 32726130 32726201 -166903949 - MIR SINE MIR -135 127 56 231 324 145 17 chr5 32726371 32726550 -166903600 - L2 LINE L2 -363 2951 2750 531 243 138 28 chr5 32726905 32727123 -166903027 + MIR SINE MIR 21 262 0 386 313 136 28 chr5 32727463 32727639 -166902511 + MIR3 SINE MIR 6 200 -8 230 319 77 0 chr5 32727997 32728088 -166902062 - L2 LINE L2 -327 2986 2889 236 291 18 3 chr5 32729256 32729344 -166900806 - MIR SINE MIR -63 145 80 39 0 0 0 chr5 32729404 32729443 -166900707 + AT_rich Low_complexity Low_complexity 1 39 0 518 239 103 29 chr5 32729570 32729903 -166900247 - LTR33 LTR ERVL -8 513 99 1764 279 104 23 chr5 32729937 32730838 -166899312 + L2 LINE L2 2206 3179 -134 2697 7 0 10 chr5 32731216 32731515 -166898635 - AluYa5 SINE Alu -15 296 1 2086 114 132 26 chr5 32732153 32732540 -166897610 + MSTA LTR MaLR 1 428 0 28 29 0 0 chr5 32733829 32733864 -166896286 + AT_rich Low_complexity Low_complexity 1 35 0 2297 88 3 0 chr5 32734105 32734401 -166895749 + AluY SINE Alu 1 297 -14 1997 229 96 21 chr5 32734657 32735274 -166894876 + L1MCb LINE L1 8 670 -5375 259 143 0 61 chr5 32735349 32735398 -166894752 + MLT2F LTR ERVL 583 663 0 635 163 37 0 chr5 32735412 32735547 -166894603 + L1MA8 LINE L1 6152 6291 0 294 239 0 0 chr5 32736085 32736156 -166893994 + ERVL LTR ERVL 853 923 -4841 2109 208 68 139 chr5 32736156 32737337 -166892813 - MER52A LTR ERV1 0 1755 659 252 217 17 0 chr5 32737471 32737531 -166892619 - MSTD LTR MaLR 0 396 336 7059 206 79 63 chr5 32737586 32740093 -166890057 - MER109 Unknown Unknown -80 2352 1 29 0 0 0 chr5 32740678 32740707 -166889443 + AT_rich Low_complexity Low_complexity 1 29 0 904 263 50 50 chr5 32740709 32741047 -166889103 - MSTD LTR MaLR -56 340 3 3441 274 43 39 chr5 32741053 32742442 -166887708 + ERVL LTR ERVL 1065 2497 -3267 291 302 0 12 chr5 32743174 32743260 -166886890 - ERVL LTR ERVL -4340 1424 1340 1258 158 64 63 chr5 32743706 32744093 -166886057 + L1MA4 LINE L1 5550 5939 -361 1879 148 24 30 chr5 32744339 32744441 -166885709 + L1MA4 LINE L1 5925 6026 -274 2416 101 0 26 chr5 32744441 32744787 -166885363 - MER1B DNA MER1_type 0 337 1 1879 148 24 30 chr5 32744787 32745057 -166885093 + L1MA4 LINE L1 6026 6295 -5 5543 242 20 102 chr5 32745194 32747450 -166882700 + L1M2a LINE L1 399 2470 -5096 2984 242 42 9 chr5 32747438 32748765 -166881385 + L1M2a LINE L1 2374 3752 -3813 * 9842 201 50 4 chr5 32749018 32751488 -166878662 + L1M2a LINE L1 3798 6380 -1185 860 256 115 33 chr5 32751651 32752162 -166877988 + MLT1G3 LTR MaLR 1 590 0 303 251 204 47 chr5 32752313 32752504 -166877646 + MIR SINE MIR 1 221 -41 727 89 9 0 chr5 32753683 32753816 -166876334 - L1PA2 LINE L1 0 6155 6043 3517 29 4 4 chr5 32753816 32754266 -166875884 + L1PA3 LINE L1 5413 5862 -293 4016 218 73 14 chr5 32754682 32756302 -166873848 - L1M4c LINE L1 -4550 2409 663 1409 237 93 14 chr5 32756319 32756584 -166873566 - MLT1C LTR MaLR 0 467 154 2327 95 0 22 chr5 32756584 32756900 -166873250 - AluSc SINE Alu 0 309 1 1409 237 93 14 chr5 32756900 32757065 -166873085 - MLT1C LTR MaLR -313 154 3 1807 208 26 8 chr5 32757166 32757546 -166872604 - MSTD LTR MaLR -3 393 7 4067 146 27 3 chr5 32757840 32758534 -166871616 + MER50 LTR ERV1 1 711 -23 1350 216 17 36 chr5 32758812 32759173 -166870977 + MLT1A1 LTR MaLR 1 354 -11 454 286 146 12 chr5 32759185 32759356 -166870794 - MIR SINE MIR -49 213 20 981 258 15 74 chr5 32759989 32760173 -166869977 + L1M3b LINE L1 8 166 -6115 2248 75 4 4 chr5 32760173 32760481 -166869669 + AluY SINE Alu 1 308 0 981 258 15 74 chr5 32760481 32760632 -166869518 + L1M3b LINE L1 166 324 -5957 11146 212 41 57 chr5 32760862 32764263 -166865887 + L1M3b LINE L1 344 3799 -2551 270 120 200 0 chr5 32764263 32764313 -166865837 + 5S rRNA rRNA 32 91 -30 11146 212 41 57 chr5 32764313 32765619 -166864531 + L1M3b LINE L1 3799 5125 -1225 1989 149 0 0 chr5 32765619 32766035 -166864115 + AluSx SINE Alu 1 312 0 11146 212 41 57 chr5 32766035 32766181 -166863969 + L1M3b LINE L1 5125 5272 -1078 1980 151 73 14 chr5 32766181 32766525 -166863625 - THE1B LTR MaLR 0 364 1 11542 103 9 0 chr5 32766525 32768091 -166862059 - THE1B-int LTR MaLR 0 1580 1 1876 131 125 18 chr5 32768091 32768420 -166861730 - THE1B LTR MaLR 0 364 1 11146 212 41 57 chr5 32768420 32768626 -166861524 + L1M3b LINE L1 4842 5050 -1300 1026 16 0 16 chr5 32768626 32768746 -166861404 + L1PA2 LINE L1 6028 6148 -7 2284 81 3 10 chr5 32768867 32769162 -166860988 + AluSx SINE Alu 1 293 -19 189 0 0 0 chr5 32770625 32770646 -166859504 + (T)n Simple_repeat Simple_repeat 1 21 0 42083 40 1 0 chr5 32770708 32776858 -166853292 - L1PA2 LINE L1 -1 6154 2 16540 185 27 9 chr5 32776860 32777122 -166853028 - L1PA15-16 LINE L1 -3049 3800 3544 2187 99 3 7 chr5 32777122 32777432 -166852718 - AluSp SINE Alu 0 309 1 16540 185 27 9 chr5 32777432 32780893 -166849257 - L1PA15-16 LINE L1 -3305 3544 5 3172 219 29 25 chr5 32780918 32781155 -166848995 - L1 LINE L1 -2994 3854 3620 2023 150 127 18 chr5 32781155 32781541 -166848609 - MSTA LTR MaLR 0 428 1 3172 219 29 25 chr5 32781541 32781980 -166848170 - L1 LINE L1 -3228 3620 3185 2664 129 31 12 chr5 32781980 32782400 -166847750 + MSTA LTR MaLR 1 428 0 8545 190 23 4 chr5 32782400 32784018 -166846132 + MSTA-int LTR MaLR 1 1649 -2 2713 129 24 7 chr5 32784022 32784441 -166845709 + MSTA LTR MaLR 3 428 0 3172 219 29 25 chr5 32784441 32784905 -166845245 - L1 LINE L1 -3665 3183 2701 6141 96 20 10 chr5 32784925 32786186 -166843964 - L1PA10 LINE L1 0 6168 4899 312 27 0 0 chr5 32786186 32786223 -166843927 + (TG)n Simple_repeat Simple_repeat 1 37 0 1447 319 66 26 chr5 32786421 32787030 -166843120 - L1 LINE L1 -6156 693 61 * 6185 209 31 44 chr5 32787025 32787978 -166842172 - L1M4 LINE L1 -1487 4659 3738 6002 153 52 28 chr5 32787978 32788231 -166841919 - Tigger3b DNA MER2_type -1798 1230 985 1991 141 0 3 chr5 32788231 32788556 -166841594 + AluSx SINE Alu 1 324 0 6002 153 52 28 chr5 32788556 32789501 -166840649 - Tigger3b DNA MER2_type -2043 985 1 6185 209 31 44 chr5 32789501 32790354 -166839796 - L1M4 LINE L1 -2408 3738 2876 7881 205 49 24 chr5 32790539 32791330 -166838820 - L1MCa LINE L1 -3050 3376 2606 533 118 11 0 chr5 32791330 32791423 -166838727 + L1PB1 LINE L1 6058 6151 0 7881 205 49 24 chr5 32791423 32793431 -166836719 - L1MCa LINE L1 -3820 2606 28 196 330 117 56 chr5 32793634 32793831 -166836319 - L2 LINE L2 -1155 2159 1951 824 256 43 0 chr5 32793838 32794072 -166836078 + L1MC4 LINE L1 6858 7101 -941 2117 226 27 59 chr5 32794073 32794648 -166835502 + MLT2B1 LTR ERVL 1 516 -4 1841 258 69 37 chr5 32794653 32795382 -166834768 + L1MC4 LINE L1 7099 7850 -192 328 240 110 0 chr5 32795389 32795489 -166834661 + L1MC4 LINE L1 7930 8040 -2 1121 120 25 0 chr5 32797425 32797583 -166832567 + FRAM SINE Alu 1 161 -15 42029 39 25 3 chr5 32797585 32803422 -166826728 + L1PA4 LINE L1 1 5966 -189 2321 216 36 65 chr5 32803882 32804684 -166825466 + L1 LINE L1 2137 2915 -3231 992 182 42 84 chr5 32804683 32804728 -166825422 + L1MB8 LINE L1 5875 5920 -258 * 289 74 19 19 chr5 32804728 32804782 -166825368 + (AATAG)n Simple_repeat Simple_repeat 2 55 0 992 182 42 84 chr5 32804782 32805044 -166825106 + L1MB8 LINE L1 5920 6169 -9 244 139 0 0 chr5 32805453 32805489 -166824661 - MLT1L LTR MaLR -526 89 54 3330 214 11 6 chr5 32805629 32806279 -166823871 + MER82 DNA MER2_type 1 653 0 752 259 86 56 chr5 32806341 32806750 -166823400 + MLT1J1 LTR MaLR 26 446 0 294 301 79 122 chr5 32807520 32807978 -166822172 - L2 LINE L2 -10 3262 2825 850 281 38 25 chr5 32808630 32808957 -166821193 + MLT1J1 LTR MaLR 1 332 -114 325 243 0 0 chr5 32809033 32809103 -166821047 + Tigger5 DNA MER2_type 2248 2317 -6 2354 92 0 0 chr5 32809270 32809564 -166820586 - AluSc SINE Alu -10 299 6 2473 58 0 3 chr5 32810362 32810657 -166819493 - AluY SINE Alu -13 298 5 236 316 171 8 chr5 32810838 32810955 -166819195 + L2 LINE L2 3137 3272 0 239 321 28 9 chr5 32813395 32813504 -166816646 - MIR SINE MIR -8 254 144 423 241 92 63 chr5 32813573 32813773 -166816377 + MLT1L LTR MaLR 119 391 -224 384 331 40 0 chr5 32813945 32814069 -166816081 - MIR SINE MIR -114 148 20 4541 194 28 2 chr5 32814069 32814941 -166815209 + L1 LINE L1 3519 4418 -1728 279 54 0 0 chr5 32814941 32814978 -166815172 + (CA)n Simple_repeat Simple_repeat 2 38 0 4541 194 28 2 chr5 32814978 32815041 -166815109 + L1 LINE L1 4418 4478 -1668 3509 147 39 13 chr5 32815037 32815875 -166814275 - L1P4 LINE L1 -465 5701 4832 * 2134 124 0 16 chr5 32815875 32816189 -166813961 + AluSx SINE Alu 1 309 -3 3509 147 39 13 chr5 32816189 32816413 -166813737 - L1P4 LINE L1 -1334 4832 4615 2605 129 46 9 chr5 32816426 32816859 -166813291 + L1PA16 LINE L1 5707 6155 -11 2522 62 0 3 chr5 32816861 32817167 -166812983 + AluY SINE Alu 1 305 -6 432 0 0 0 chr5 32817713 32817761 -166812389 + (CA)n Simple_repeat Simple_repeat 1 48 0 1029 249 49 8 chr5 32817876 32818121 -166812029 + MIR SINE MIR 3 257 -5 234 0 0 0 chr5 32818624 32818650 -166811500 + (CAA)n Simple_repeat Simple_repeat 2 27 0 232 309 66 15 chr5 32819512 32819648 -166810502 + MLT1J2 LTR MaLR 67 209 -241 1355 217 72 154 chr5 32819667 32820304 -166809846 - L1ME2 LINE L1 -1 6163 5476 746 134 47 0 chr5 32820304 32820431 -166809719 + L1MB5 LINE L1 6033 6165 -9 1355 217 72 154 chr5 32820431 32820745 -166809405 - L1ME2 LINE L1 -688 5476 5322 1867 173 0 3 chr5 32820745 32821046 -166809104 - AluJb SINE Alu -12 300 1 1355 217 72 154 chr5 32821046 32821134 -166809016 - L1ME2 LINE L1 -842 5322 5228 287 222 0 16 chr5 32821900 32821963 -166808187 + Tigger5 DNA MER2_type 2261 2322 -1 505 193 9 46 chr5 32821995 32822104 -166808046 + Tigger5 DNA MER2_type 2219 2323 0 1365 241 46 9 chr5 32822107 32822543 -166807607 - L1ME2 LINE L1 -908 5238 4787 229 154 108 0 chr5 32822602 32822667 -166807483 - L1MC3 LINE L1 -16 7769 7698 * 2653 220 4 1 chr5 32822662 32823430 -166806720 - L1 LINE L1 -1258 5604 4681 380 169 0 0 chr5 32823417 32823488 -166806662 - L1 LINE L1 -2701 4161 4091 * 18415 111 56 6 chr5 32823480 32826812 -166803338 - L1PBa LINE L1 -3328 3534 36 4767 251 59 29 chr5 32826815 32827890 -166802260 - L1M4c LINE L1 -2136 4246 3204 2565 24 0 3 chr5 32827890 32828185 -166801965 - AluY SINE Alu -17 294 1 4767 251 59 29 chr5 32828185 32829863 -166800287 - L1M4c LINE L1 -3178 3204 1266 6809 52 7 6 chr5 32830561 32831882 -166798268 + L1PA6 LINE L1 4828 6152 -2 392 324 80 55 chr5 32831961 32832236 -166797914 + HAL1 LINE L1 2 283 -2224 1674 155 90 31 chr5 32832277 32832631 -166797519 - THE1C LTR MaLR 0 375 1 1397 257 77 80 chr5 32832669 32833723 -166796427 + HAL1 LINE L1 1455 2505 -2 1392 191 36 18 chr5 32833784 32834062 -166796088 + AluJo SINE Alu 1 283 -19 895 186 40 34 chr5 32834065 32834242 -166795908 - AluJo SINE Alu -134 178 1 3032 193 74 5 chr5 32834279 32835568 -166794582 - L1MA5 LINE L1 -7 6293 4734 58 59 0 8 chr5 32835592 32835626 -166794524 + AT_rich Low_complexity Low_complexity 1 34 -83 3041 150 63 7 chr5 32835626 32836198 -166793952 - L1PA16 LINE L1 -2 6815 6212 58 59 0 8 chr5 32836198 32836281 -166793869 + AT_rich Low_complexity Low_complexity 34 117 0 1757 103 7 15 chr5 32836292 32836565 -166793585 - L1PA16 LINE L1 -598 6218 5948 895 167 36 14 chr5 32836931 32837153 -166792997 - L1PA16 LINE L1 -815 5982 5756 4894 213 9 11 chr5 32837167 32838219 -166791931 - L1PA16 LINE L1 -1826 4971 3921 4336 230 39 15 chr5 32838214 32839419 -166790731 - L1PA16 LINE L1 -4381 2416 1173 * 2911 291 41 20 chr5 32839395 32840251 -166789899 - L1PA16 LINE L1 -5913 874 1 * 4493 216 16 10 chr5 32840268 32841025 -166789125 - L1 LINE L1 -1402 4744 3977 2061 137 3 0 chr5 32841025 32841317 -166788833 - AluSx SINE Alu -19 293 1 4493 216 16 10 chr5 32841317 32841601 -166788549 - L1 LINE L1 -2169 3977 3696 1415 213 0 0 chr5 32841601 32841859 -166788291 - AluJo SINE Alu -12 300 43 492 179 0 11 chr5 32841864 32841959 -166788191 - L1 LINE L1 -2451 3695 3602 6113 32 7 1 chr5 32842059 32842808 -166787342 + L1PA3 LINE L1 5292 6044 -111 1246 318 47 26 chr5 32842980 32843474 -166786676 - L2 LINE L2 0 3313 2810 3287 68 2 5 chr5 32844144 32844583 -166785567 + L1PA8 LINE L1 5727 6164 -8 26 0 0 0 chr5 32846621 32846647 -166783503 + AT_rich Low_complexity Low_complexity 1 26 0 1934 150 46 22 chr5 32846862 32847228 -166782922 - THE1C LTR MaLR 0 375 1 29 94 0 0 chr5 32848458 32848543 -166781607 + AT_rich Low_complexity Low_complexity 1 85 0 829 237 6 6 chr5 32848720 32848897 -166781253 - MER5B DNA MER1_type -1 177 1 1804 154 3 46 chr5 32848924 32849248 -166780902 - AluJb SINE Alu 0 312 3 2223 119 3 0 chr5 32849315 32849610 -166780540 + AluSx SINE Alu 1 296 -16 193 156 16 31 chr5 32851515 32851579 -166778571 + T-rich Low_complexity Low_complexity 3 65 0 399 98 0 0 chr5 32851787 32851848 -166778302 + (CA)n Simple_repeat Simple_repeat 1 61 0 195 301 88 37 chr5 32852841 32852977 -166777173 - L2 LINE L2 -3 3310 3168 2087 99 11 0 chr5 32853012 32853284 -166776866 + AluSx SINE Alu 34 308 -4 624 322 75 63 chr5 32853631 32854549 -166775601 - L2 LINE L2 -675 2639 1711 1831 88 18 29 chr5 32854575 32854847 -166775303 + AluSq SINE Alu 36 304 -9 213 351 113 33 chr5 32855031 32855367 -166774783 - L2 LINE L2 -1905 1409 1047 899 251 71 0 chr5 32855521 32855816 -166774334 + L1MC4a LINE L1 5613 5928 -1880 185 103 77 0 chr5 32855822 32855861 -166774289 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 36 62 0 0 chr5 32855963 32856027 -166774123 + AT_rich Low_complexity Low_complexity 1 64 0 247 274 95 12 chr5 32857508 32857592 -166772558 + L2 LINE L2 3138 3228 -44 334 278 56 0 chr5 32857603 32857711 -166772439 + MIR SINE MIR 106 219 -43 336 357 32 54 chr5 32858136 32858321 -166771829 + L2 LINE L2 3092 3272 0 1167 232 46 32 chr5 32858325 32858609 -166771541 - AluJb SINE Alu -13 289 2 312 297 46 95 chr5 32858676 32859023 -166771127 + L2 LINE L2 2154 2483 -831 311 304 143 7 chr5 32859038 32859215 -166770935 + MIR SINE MIR 4 201 -61 327 306 75 52 chr5 32859960 32860094 -166770056 - L2 LINE L2 0 3272 3136 227 273 83 8 chr5 32860379 32860396 -166769754 - L1MA10 LINE L1 0 6334 6318 2815 219 136 31 chr5 32860396 32861573 -166768577 - L1ME2 LINE L1 -8 6156 4873 1873 166 33 6 chr5 32861636 32861973 -166768177 + MER46B DNA MER2_type 7 227 -9 2272 127 31 3 chr5 32862137 32862491 -166767659 + THE1B LTR MaLR 1 364 0 366 357 41 15 chr5 32862904 32863100 -166767050 - L1MEc LINE L1 -6031 365 165 279 348 64 0 chr5 32863174 32863315 -166766835 - L2 LINE L2 -559 2755 2606 675 241 89 59 chr5 32863330 32863566 -166766584 - MIR SINE MIR -5 257 15 2020 117 0 0 chr5 32863882 32864148 -166766002 + AluSx SINE Alu 17 282 -30 191 343 152 9 chr5 32865047 32865152 -166764998 + MIR SINE MIR 25 144 -118 1269 229 81 45 chr5 32865163 32865608 -166764542 + MLT1C LTR MaLR 7 467 0 261 0 0 0 chr5 32867526 32867555 -166762595 + (CA)n Simple_repeat Simple_repeat 2 30 0 2243 113 0 3 chr5 32867943 32868244 -166761906 - AluSq SINE Alu -13 300 1 9711 37 4 0 chr5 32868308 32870055 -166760095 + L1PA4 LINE L1 4202 5955 -200 6064 231 81 50 chr5 32870507 32871698 -166758452 + L1MC4a LINE L1 5192 6344 -1464 2260 132 28 6 chr5 32871698 32872054 -166758096 - THE1B LTR MaLR 0 364 1 6064 231 81 50 chr5 32872054 32873204 -166756946 + L1MC4a LINE L1 6344 7602 -206 207 276 81 35 chr5 32873418 32873505 -166756645 + L2 LINE L2 2528 2618 -696 2175 98 0 13 chr5 32923730 32924036 -166706114 - AluSg SINE Alu -8 302 1 2126 107 3 22 chr5 32924056 32924374 -166705776 - AluSx SINE Alu 0 312 1 351 168 0 134 chr5 32924437 32924556 -166705594 - AluSg/x SINE Alu 0 302 200 2058 105 11 7 chr5 32924651 32924937 -166705213 - AluSx SINE Alu -15 297 11 2551 156 3 12 chr5 32924945 32925584 -166704566 - MER72 LTR ERV1 -39 683 1 756 286 40 48 chr5 32926256 32926537 -166703613 + L1MC4a LINE L1 5422 5640 -481 2426 67 7 0 chr5 32926537 32926836 -166703314 - AluY SINE Alu -10 301 1 756 286 40 48 chr5 32926836 32927015 -166703135 + L1MC4a LINE L1 5640 5819 -302 189 294 59 0 chr5 32927317 32927368 -166702782 - MER5B DNA MER1_type 0 178 125 457 366 103 20 chr5 32928167 32928574 -166701576 - L1MC/D LINE L1 -2011 5797 5357 2142 94 3 11 chr5 32928577 32928864 -166701286 - AluSp SINE Alu -28 285 1 234 315 56 49 chr5 32929349 32929511 -166700639 + MER5A DNA MER1_type 21 183 -6 553 251 133 9 chr5 32929585 32929796 -166700354 - L2 LINE L2 -15 3298 3062 30 0 0 0 chr5 32930672 32930702 -166699448 + AT_rich Low_complexity Low_complexity 1 30 0 7547 80 17 0 chr5 32930705 32932525 -166697625 - L1PA7 LINE L1 -7 6147 4309 549 168 42 35 chr5 32932643 32932786 -166697364 - L1MC/D LINE L1 -805 5341 5198 261 146 0 0 chr5 32932795 32932843 -166697307 + (TTTTC)n Simple_repeat Simple_repeat 5 52 0 473 305 76 23 chr5 32933889 32934286 -166695864 + L1MC4 LINE L1 7602 8019 -23 1098 201 29 112 chr5 32936411 32936859 -166693291 + L1ME1 LINE L1 5751 6161 -5 294 226 22 58 chr5 32936870 32937007 -166693143 + L1M4 LINE L1 5199 5330 -816 386 312 80 34 chr5 32937022 32937285 -166692865 + L1MEc LINE L1 1906 2180 -4216 21 57 0 0 chr5 32937309 32937344 -166692806 + AT_rich Low_complexity Low_complexity 1 35 0 266 351 71 0 chr5 32937423 32937731 -166692419 + L1MEc LINE L1 1455 1784 -4612 288 0 0 0 chr5 32937744 32937776 -166692374 + (TG)n Simple_repeat Simple_repeat 2 33 0 372 237 15 67 chr5 32937826 32937961 -166692189 - LTR16A LTR ERVL -2 448 321 1652 233 70 38 chr5 32938288 32938638 -166691512 - MLT1E LTR MaLR -2 591 210 2303 175 26 7 chr5 32938638 32939056 -166691094 - MSTB LTR MaLR 0 426 1 1652 233 70 38 chr5 32939056 32939273 -166690877 - MLT1E LTR MaLR -383 210 1 23 54 0 0 chr5 32939596 32939633 -166690517 + AT_rich Low_complexity Low_complexity 1 37 0 273 286 11 11 chr5 32940598 32940689 -166689461 + MER96 DNA MER1_type? 85 175 0 255 114 0 0 chr5 32940834 32940878 -166689272 + (TA)n Simple_repeat Simple_repeat 2 45 0 205 288 14 0 chr5 32940891 32940964 -166689186 + (TA)n Simple_repeat Simple_repeat 1 74 0 2865 79 50 17 chr5 32941259 32941679 -166688471 - L1PA11 LINE L1 0 6174 5741 6040 95 18 6 chr5 32941791 32942897 -166687253 - L1PA11 LINE L1 -632 5542 4429 820 103 0 0 chr5 32942897 32943004 -166687146 - U6 snRNA snRNA 0 107 1 836 285 33 12 chr5 32943055 32943297 -166686853 - MIR SINE MIR -8 254 8 506 271 50 11 chr5 32943302 32943483 -166686667 - L1ME LINE L1 -330 5791 5604 502 298 12 6 chr5 32947428 32947596 -166682554 + LTR33 LTR ERVL 10 178 -343 290 236 79 14 chr5 32948548 32948688 -166681462 - MER113 DNA MER1_type? -372 149 1 1510 173 151 34 chr5 32948698 32949114 -166681036 + MLT1C LTR MaLR 1 465 -2 2242 90 0 3 chr5 32949130 32949418 -166680732 + AluY SINE Alu 13 299 -12 241 350 60 10 chr5 32949625 32949725 -166680425 + MIR SINE MIR 16 120 -88 204 133 50 0 chr5 32950431 32950491 -166679659 + (CAAAT)n Simple_repeat Simple_repeat 1 63 0 258 341 0 12 chr5 32950761 32950843 -166679307 - L2 LINE L2 -44 3228 3148 317 344 91 13 chr5 32950858 32951088 -166679062 - MIR SINE MIR -8 254 7 252 293 112 17 chr5 32952172 32952288 -166677862 - MIR SINE MIR -62 146 20 401 319 22 21 chr5 32952679 32952829 -166677321 + MIR SINE MIR 5 154 -69 333 281 29 29 chr5 32953200 32953371 -166676779 - L1ME LINE L1 -316 5805 5635 4278 21 0 0 chr5 32953877 32954399 -166675751 - L1P LINE L1 -1428 4718 4197 2409 141 73 2 chr5 32954499 32954939 -166675211 + MER31A LTR ERV1 15 485 0 216 362 0 64 chr5 32954939 32955033 -166675117 + MIR SINE MIR 45 132 -76 284 192 0 0 chr5 32955386 32955438 -166674712 + MER66A LTR ERV1 287 338 -140 237 319 50 39 chr5 32955712 32955894 -166674256 + Charlie2 DNA MER1_type 27 210 -2572 1416 130 40 0 chr5 32955894 32956147 -166674003 + L1MA5 LINE L1 5863 6125 -175 16491 56 4 11 chr5 32956157 32959108 -166671042 - L1PA6 LINE L1 -6 6148 3229 7644 27 1 0 chr5 32959103 32960534 -166669616 + L1PA4 LINE L1 4723 6155 0 * 741 294 70 36 chr5 32961420 32961804 -166668346 + LTR16A LTR ERVL 27 423 -27 186 43 0 0 chr5 32961825 32961848 -166668302 + (CAA)n Simple_repeat Simple_repeat 2 24 0 190 226 94 0 chr5 32962944 32962997 -166667153 - L3 LINE CR1 -1261 316 259 842 310 14 5 chr5 32963217 32963433 -166666717 - MIR SINE MIR -13 249 32 1874 146 56 21 chr5 32965215 32965592 -166664558 - MLT1B LTR MaLR 0 390 1 416 271 28 0 chr5 32966477 32966584 -166663566 + MIR SINE MIR 149 258 -4 422 221 62 72 chr5 32966610 32966805 -166663345 + MLT1L LTR MaLR 418 610 -5 1689 165 4 18 chr5 32967004 32967276 -166662874 + AluJb SINE Alu 15 282 -30 482 326 46 5 chr5 32967322 32967518 -166662632 + MIR SINE MIR 1 204 -58 2692 126 16 23 chr5 32968245 32968688 -166661462 + L1PA15 LINE L1 5717 6156 -9 212 371 95 0 chr5 32968894 32968999 -166661151 - L2 LINE L2 -11 3261 3147 21 57 0 0 chr5 32968999 32969034 -166661116 + AT_rich Low_complexity Low_complexity 1 35 0 738 164 0 0 chr5 32969223 32969339 -166660811 + FLAM_C SINE Alu 1 116 -27 372 263 26 0 chr5 32969769 32969883 -166660267 - MIR3 SINE MIR -7 201 85 428 270 18 84 chr5 32970766 32970992 -166659158 + LTR33A LTR ERVL 308 518 -5 2121 103 7 14 chr5 32971020 32971310 -166658840 + AluSx SINE Alu 18 305 -7 787 241 32 44 chr5 32974402 32974651 -166655499 - MER102b DNA MER1_type -1 340 95 7054 106 35 15 chr5 32975055 32975962 -166654188 - Tigger1 DNA MER2_type -5 2413 1477 2193 136 0 0 chr5 32975962 32976264 -166653886 - AluSg SINE Alu -8 302 1 7054 106 35 15 chr5 32976264 32976498 -166653652 - Tigger1 DNA MER2_type -941 1477 1249 737 224 0 0 chr5 32976499 32976633 -166653517 + FLAM_A SINE Alu 1 134 -8 2005 115 3 21 chr5 32976633 32976963 -166653187 - Tigger1 DNA MER2_type -1160 1258 935 2176 137 41 77 chr5 32976992 32977460 -166652690 - Tigger1 DNA MER2_type -1967 451 1 1806 161 3 18 chr5 32978329 32978638 -166651512 + AluJb SINE Alu 1 305 0 502 272 98 31 chr5 32979343 32979558 -166650592 - MIR SINE MIR -13 249 28 1830 161 15 66 chr5 32979741 32980151 -166649999 - MLT1B LTR MaLR -1 389 1 1867 183 25 6 chr5 32980360 32980715 -166649435 + MLT1A1 LTR MaLR 4 365 0 930 264 21 12 chr5 32980976 32981218 -166648932 + MIR SINE MIR 2 245 -17 833 338 70 34 chr5 32981325 32981881 -166648269 - MLT1K LTR MaLR -12 576 1 253 313 65 25 chr5 32983935 32984136 -166646014 - MLT1K LTR MaLR -13 575 367 723 176 38 124 chr5 32984593 32984644 -166645506 - MIR SINE MIR -30 232 178 2045 156 0 0 chr5 32984644 32984945 -166645205 - AluSx SINE Alu -11 301 1 723 176 38 124 chr5 32984945 32984993 -166645157 - MIR SINE MIR -84 178 127 2164 119 0 3 chr5 32984993 32985288 -166644862 + AluSg SINE Alu 1 294 -16 723 176 38 124 chr5 32985288 32985397 -166644753 - MIR SINE MIR -135 127 41 309 51 0 0 chr5 32985723 32985762 -166644388 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1106 87 29 52 chr5 32985865 32986037 -166644113 - L1PA11 LINE L1 -6 6168 6001 1306 229 59 31 chr5 32986245 32986634 -166643516 + MLT1C LTR MaLR 63 462 -5 433 247 183 8 chr5 32986653 32986904 -166643246 + LTR50 LTR ERVL 18 312 -483 252 299 36 98 chr5 32987145 32987212 -166642938 + MIR SINE MIR 67 137 -125 1524 151 110 11 chr5 32987212 32987484 -166642666 - AluJo SINE Alu -9 303 5 252 299 36 98 chr5 32987484 32987610 -166642540 + MIR SINE MIR 137 248 -14 207 139 28 0 chr5 32988879 32988915 -166641235 + L2 LINE L2 2765 2801 -513 204 370 43 0 chr5 32989421 32989513 -166640637 + MIR SINE MIR 46 141 -121 396 289 31 25 chr5 32990388 32990547 -166639603 - L1ME LINE L1 -447 5723 5564 1919 192 70 36 chr5 32990549 32990924 -166639226 - MSTB2 LTR MaLR 0 457 96 2184 89 98 9 chr5 32990924 32991250 -166638900 + THE1A LTR MaLR 1 355 0 12000 91 1 6 chr5 32991250 32992837 -166637313 + THE1A-int LTR MaLR 1 1580 0 2717 82 6 0 chr5 32992837 32993190 -166636960 + THE1A LTR MaLR 1 355 0 1919 192 70 36 chr5 32993190 32993254 -166636896 - MSTB2 LTR MaLR -360 97 1 316 242 110 0 chr5 32993254 32993345 -166636805 - L1ME LINE L1 -604 5566 5466 22 80 0 0 chr5 32993407 32993457 -166636693 + AT_rich Low_complexity Low_complexity 1 50 0 1636 171 87 106 chr5 32993588 32994041 -166636109 + MLT2B1 LTR ERVL 1 444 -76 204 97 0 0 chr5 32994041 32994072 -166636078 + (CA)n Simple_repeat Simple_repeat 2 32 0 1636 171 87 106 chr5 32994072 32994146 -166636004 + MLT2B1 LTR ERVL 444 518 -2 872 125 0 0 chr5 32994289 32994425 -166635725 - L1PA15 LINE L1 -6 6159 6024 567 308 11 11 chr5 32994533 32994715 -166635435 + MIR SINE MIR 48 229 -33 35 71 0 0 chr5 32995827 32995897 -166634253 + AT_rich Low_complexity Low_complexity 1 70 0 4343 135 59 12 chr5 32996055 32996805 -166633345 - LTR1 LTR ERV1 0 785 1 629 245 86 0 chr5 32997012 32997163 -166632987 - FRAM SINE Alu -2 164 1 316 307 6 39 chr5 32997164 32997343 -166632807 - L1ME3A LINE L1 -299 5871 5699 483 265 48 0 chr5 32997441 32997607 -166632543 - MER63C DNA MER1_type -1 929 756 292 80 20 0 chr5 32997715 32997765 -166632385 - MER63C DNA MER1_type -420 510 460 2074 109 0 7 chr5 32997765 32998087 -166632063 + AluSx SINE Alu 1 320 0 436 195 195 0 chr5 32998087 32998174 -166631976 + AluSc SINE Alu 133 236 -73 1017 198 9 18 chr5 32998212 32998434 -166631716 - MER63C DNA MER1_type -458 472 253 741 223 6 0 chr5 32998746 32998903 -166631247 + MIR SINE MIR 104 261 -1 211 246 85 51 chr5 32998829 32998947 -166631203 - MIR SINE MIR 0 262 141 * 678 82 0 0 chr5 32999284 32999381 -166630769 + L1P LINE L1 4127 4223 -1923 270 30 0 0 chr5 32999392 32999425 -166630725 + L1P LINE L1 4211 4243 -1903 2342 93 3 3 chr5 32999539 32999849 -166630301 + AluSg SINE Alu 1 310 0 412 343 23 12 chr5 33000212 33000384 -166629766 + MIR SINE MIR 12 185 -77 21 36 0 0 chr5 33000610 33000638 -166629512 + AT_rich Low_complexity Low_complexity 1 28 0 302 266 117 11 chr5 33001957 33002051 -166628099 - L2 LINE L2 -50 3263 3160 2127 119 33 3 chr5 33002063 33002365 -166627785 + AluSx SINE Alu 1 311 -1 685 347 89 55 chr5 33002521 33003236 -166626914 - L2 LINE L2 -420 2894 2155 1051 193 152 12 chr5 33004052 33004296 -166625854 + AluJo SINE Alu 4 281 -31 183 80 0 0 chr5 33004301 33004326 -166625824 + (TAA)n Simple_repeat Simple_repeat 2 26 0 531 276 79 35 chr5 33004745 33004973 -166625177 - L2 LINE L2 -2 3311 3074 * 3634 252 200 14 chr5 33004948 33006335 -166623815 - L2 LINE L2 -350 2964 1321 370 314 79 63 chr5 33006624 33006939 -166623211 - L2 LINE L2 -5 3308 2989 1433 47 0 0 chr5 33007022 33007193 -166622957 - AluYb8 SINE Alu -12 306 136 474 241 91 37 chr5 33007193 33007380 -166622770 - MIR SINE MIR -53 209 13 617 262 57 61 chr5 33007401 33007630 -166622520 + MIR SINE MIR 3 230 -32 762 210 99 12 chr5 33007639 33007882 -166622268 - MER33 DNA MER1_type 0 324 61 183 42 0 0 chr5 33008563 33008587 -166621563 + (T)n Simple_repeat Simple_repeat 1 24 0 266 236 313 14 chr5 33008723 33008867 -166621283 - MIR SINE MIR -56 206 20 999 282 129 59 chr5 33009004 33009494 -166620656 + L2 LINE L2 1563 2086 -1228 209 274 170 9 chr5 33010078 33010184 -166619966 - L2 LINE L2 -225 3047 2925 185 283 133 0 chr5 33010561 33010621 -166619529 + L3 LINE CR1 1380 1447 -130 201 278 0 0 chr5 33010742 33010796 -166619354 - L2 LINE L2 -92 3221 3168 321 287 32 0 chr5 33011553 33011647 -166618503 + MLT1K LTR MaLR 175 271 -317 1161 162 117 104 chr5 33011670 33012068 -166618082 + MLT1A2 LTR MaLR 1 374 0 259 236 45 22 chr5 33012142 33012231 -166617919 + MLT1K LTR MaLR 411 501 -87 2221 130 0 0 chr5 33012293 33012600 -166617550 - AluSx SINE Alu -5 307 1 592 311 135 27 chr5 33013443 33013739 -166616411 - L2 LINE L2 -1228 2086 1759 499 293 24 37 chr5 33014096 33014260 -166615890 + MIR SINE MIR 5 166 -96 345 326 154 39 chr5 33014335 33014568 -166615582 + L2 LINE L2 3012 3271 -1 616 289 6 0 chr5 33016345 33016518 -166613632 + MER5B DNA MER1_type 1 174 -4 304 262 215 20 chr5 33016581 33016730 -166613420 - MER5B DNA MER1_type 0 178 1 720 151 87 0 chr5 33016902 33017074 -166613076 - MER53 DNA DNA 0 189 3 438 20 0 0 chr5 33018807 33018858 -166611292 + (CA)n Simple_repeat Simple_repeat 2 52 0 425 286 50 50 chr5 33019473 33019564 -166610586 - MIR3 SINE MIR -10 198 105 2182 131 3 0 chr5 33019564 33019870 -166610280 - AluSx SINE Alu -5 307 1 425 286 50 50 chr5 33019870 33019918 -166610232 - MIR3 SINE MIR -102 106 59 209 196 18 0 chr5 33021048 33021104 -166609046 + CT-rich Low_complexity Low_complexity 2 58 0 279 54 0 0 chr5 33021513 33021550 -166608600 + (CA)n Simple_repeat Simple_repeat 1 37 0 502 280 140 10 chr5 33022500 33022707 -166607443 + MIR SINE MIR 29 262 0 553 248 25 10 chr5 33022837 33023039 -166607111 - L1MC5 LINE L1 -37 7924 7720 592 235 75 5 chr5 33023041 33023228 -166606922 + MLT1H LTR MaLR 1 200 -349 228 327 159 9 chr5 33023241 33023354 -166606796 + MLT1H LTR MaLR 420 549 0 330 26 0 0 chr5 33023706 33023745 -166606405 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr5 33023781 33023824 -166606326 + (GA)n Simple_repeat Simple_repeat 1 43 0 1679 135 19 61 chr5 33023886 33024198 -166605952 + AluJo SINE Alu 3 301 -11 486 145 14 29 chr5 33024204 33024342 -166605808 + GA-rich Low_complexity Low_complexity 1 136 0 2018 139 0 10 chr5 33025077 33025410 -166604740 - AluJb SINE Alu 0 312 1 666 214 19 0 chr5 33025632 33025786 -166604364 - MER103 DNA DNA -2 164 8 435 326 7 17 chr5 33025863 33026022 -166604128 - MIR3 SINE MIR -48 160 7 21 0 0 0 chr5 33026354 33026375 -166603775 + AT_rich Low_complexity Low_complexity 1 21 0 508 319 122 40 chr5 33026481 33026982 -166603168 + MLT1L LTR MaLR 1 542 -73 549 368 95 6 chr5 33028105 33028420 -166601730 + L3 LINE CR1 1046 1388 -189 1622 199 21 18 chr5 33028454 33028790 -166601360 + MER1B DNA MER1_type 1 337 0 267 293 195 35 chr5 33028799 33028973 -166601177 + L3 LINE CR1 1361 1562 -15 313 194 0 42 chr5 33029116 33029188 -166600962 + L2 LINE L2 3243 3311 -2 183 129 0 0 chr5 33029550 33029581 -166600569 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 5265 77 8 4 chr5 33029603 33030318 -166599832 - L1PA10 LINE L1 -1 6167 5450 234 192 0 0 chr5 33030318 33030370 -166599780 + CT-rich Low_complexity Low_complexity 2 53 0 1299 142 82 113 chr5 33030652 33031032 -166599118 + L1MA4A LINE L1 5932 6299 -4 209 253 211 11 chr5 33031242 33031337 -166598813 - MIR SINE MIR -120 142 29 329 288 50 43 chr5 33031351 33031490 -166598660 + MIR SINE MIR 104 243 -19 22 35 0 0 chr5 33032684 33032713 -166597437 + AT_rich Low_complexity Low_complexity 1 29 0 868 41 0 72 chr5 33032779 33032973 -166597177 + (TA)n Simple_repeat Simple_repeat 1 180 0 317 239 68 0 chr5 33034074 33034162 -166595988 + L1MA10 LINE L1 6241 6334 0 366 23 0 0 chr5 33035605 33035648 -166594502 + (TG)n Simple_repeat Simple_repeat 2 44 0 285 183 0 0 chr5 33035648 33035708 -166594442 + (TA)n Simple_repeat Simple_repeat 2 61 0 205 293 40 40 chr5 33038021 33038096 -166592054 + L3b LINE CR1 1393 1467 -116 2357 98 10 0 chr5 33038962 33039259 -166590891 - AluSx SINE Alu -12 300 1 1236 155 10 0 chr5 33039396 33039603 -166590547 + MER2 DNA MER2_type 2 210 -135 515 254 65 0 chr5 33041886 33042024 -166588126 - MIR SINE MIR -13 249 103 231 292 0 0 chr5 33042071 33042136 -166588014 - L1 LINE L1 -1329 4817 4753 199 385 55 0 chr5 33042141 33042232 -166587918 - MIR SINE MIR -165 97 2 1056 233 126 82 chr5 33043211 33043880 -166586270 + HAL1 LINE L1 8 705 -1802 277 232 50 61 chr5 33044023 33044122 -166586028 + MIR SINE MIR 92 189 -73 315 339 42 0 chr5 33044125 33044243 -166585907 - MIR SINE MIR -23 239 117 33 0 0 0 chr5 33044756 33044789 -166585361 + AT_rich Low_complexity Low_complexity 1 33 0 15805 75 8 1 chr5 33044791 33047245 -166582905 - L1PA7 LINE L1 -5 6149 3673 261 0 0 0 chr5 33047245 33047274 -166582876 + (TG)n Simple_repeat Simple_repeat 2 30 0 15805 75 8 1 chr5 33047274 33047710 -166582440 - L1PA7 LINE L1 -2481 3673 3242 187 242 0 0 chr5 33048518 33048551 -166581599 - L2 LINE L2 -21 3251 3219 742 166 0 43 chr5 33048777 33048916 -166581234 - FLAM_C SINE Alu 0 133 1 2272 97 3 3 chr5 33049074 33049385 -166580765 - AluSq SINE Alu -2 311 1 1362 199 3 43 chr5 33049386 33049445 -166580705 - AluJo SINE Alu -11 301 241 1680 186 24 12 chr5 33049445 33049784 -166580366 + MER61A LTR ERV1 1 343 0 1362 199 3 43 chr5 33049784 33050025 -166580125 - AluJo SINE Alu -71 241 13 2291 122 0 0 chr5 33050644 33050955 -166579195 - AluSq SINE Alu -2 311 1 256 349 0 0 chr5 33051655 33051718 -166578432 - L2 LINE L2 -24 3289 3227 27 29 0 0 chr5 33051922 33051956 -166578194 + AT_rich Low_complexity Low_complexity 1 34 0 468 232 66 31 chr5 33052304 33052487 -166577663 - L1ME2 LINE L1 -1 6163 5971 461 307 121 54 chr5 33052680 33053466 -166576684 - L2 LINE L2 -198 3074 2238 317 234 0 0 chr5 33053466 33053530 -166576620 + L1MC4 LINE L1 6640 6703 -1339 202 285 60 45 chr5 33053618 33053714 -166576436 - MER5B DNA MER1_type -78 100 7 1886 135 35 35 chr5 33053869 33054180 -166575970 - AluSx SINE Alu 0 312 2 241 175 53 0 chr5 33054613 33054670 -166575480 - LTR66 LTR ERVL -153 457 398 302 116 53 21 chr5 33054670 33054765 -166575385 + (TA)n Simple_repeat Simple_repeat 2 99 0 190 250 30 15 chr5 33055038 33055170 -166574980 + GA-rich Low_complexity Low_complexity 2 135 0 213 364 0 0 chr5 33055612 33055678 -166574472 - MIR3 SINE MIR -36 172 107 1342 118 55 9 chr5 33055702 33055922 -166574228 + MER30 DNA MER1_type 1 230 0 2197 82 0 7 chr5 33056231 33056538 -166573612 - AluSc SINE Alu 0 305 1 189 397 43 26 chr5 33056584 33056700 -166573450 - L2 LINE L2 -17 3255 3138 215 309 55 88 chr5 33056875 33057092 -166573058 + MIR SINE MIR 46 255 -7 * 933 213 62 62 chr5 33057050 33057290 -166572860 - MIR SINE MIR 0 262 23 21 57 0 0 chr5 33057547 33057582 -166572568 + AT_rich Low_complexity Low_complexity 1 35 0 320 197 142 126 chr5 33058151 33058334 -166571816 - L1MC4 LINE L1 0 8042 7857 1009 272 39 27 chr5 33058370 33058708 -166571442 + LTR16A LTR ERVL 31 372 -78 26 64 0 0 chr5 33058758 33058805 -166571345 + AT_rich Low_complexity Low_complexity 1 47 0 963 220 75 20 chr5 33058805 33059002 -166571148 - L1MC4 LINE L1 -249 7793 7573 216 0 0 0 chr5 33059002 33059026 -166571124 + (CTTTG)n Simple_repeat Simple_repeat 2 25 0 963 220 75 20 chr5 33059026 33059123 -166571027 - L1MC4 LINE L1 -469 7573 7483 230 301 0 14 chr5 33059499 33059572 -166570578 - HsTC2 DNA Tc2 -1816 82 11 636 299 16 16 chr5 33059575 33059759 -166570391 - MIR SINE MIR -31 231 48 2019 124 26 100 chr5 33060544 33060964 -166569186 + MLT1B LTR MaLR 1 389 -1 795 250 88 37 chr5 33061959 33062231 -166567919 + L2 LINE L2 3028 3313 0 475 261 33 56 chr5 33062229 33062409 -166567741 - L2 LINE L2 -4 3309 3134 * 25 0 0 0 chr5 33063796 33063821 -166566329 + AT_rich Low_complexity Low_complexity 1 25 0 354 326 29 22 chr5 33064989 33065127 -166565023 - L2 LINE L2 0 3313 3175 1080 116 9 111 chr5 33065154 33065183 -166564967 - THE1B LTR MaLR 0 364 334 7178 35 1 33 chr5 33065183 33066335 -166563815 + L1PA4 LINE L1 5031 6152 -3 1080 116 9 111 chr5 33066335 33066521 -166563629 - THE1B LTR MaLR -30 334 171 225 0 0 0 chr5 33066617 33066642 -166563508 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 959 332 62 28 chr5 33066713 33067315 -166562835 - L2 LINE L2 -516 2798 2177 743 313 60 17 chr5 33067401 33068116 -166562034 + L1MEc LINE L1 1075 1820 -4576 788 167 0 0 chr5 33068326 33068452 -166561698 - FLAM_C SINE Alu -3 130 5 766 256 76 16 chr5 33068625 33069072 -166561078 + L1MEc LINE L1 2178 2612 -3603 546 143 9 38 chr5 33069096 33069201 -166560949 + MSTC LTR MaLR 1 102 -326 713 301 152 17 chr5 33069214 33069616 -166560534 + LTR33 LTR ERVL 14 469 -52 284 308 0 0 chr5 33069668 33069775 -166560375 + L1MEc LINE L1 3282 3388 -2827 329 285 40 46 chr5 33069779 33069930 -166560220 + L1MEc LINE L1 3801 3950 -2265 746 125 8 8 chr5 33070072 33070192 -166559958 - AluSg/x SINE Alu -1 309 190 1450 96 0 11 chr5 33070192 33070380 -166559770 + AluSx SINE Alu 22 207 -105 921 114 0 0 chr5 33071858 33071990 -166558160 + AluSc SINE Alu 170 301 -8 214 235 49 62 chr5 33072460 33072541 -166557609 - L2 LINE L2 0 3313 3234 371 328 76 0 chr5 33072648 33072779 -166557371 + MIR3 SINE MIR 5 145 -63 263 300 127 64 chr5 33072932 33073152 -166556998 + L2 LINE L2 2953 3186 -86 25 75 0 0 chr5 33074984 33075037 -166555113 + AT_rich Low_complexity Low_complexity 1 53 0 481 171 38 9 chr5 33075038 33075143 -166555007 + L1MD3 LINE L1 7873 7980 -15 2126 83 7 4 chr5 33075538 33075814 -166554336 + AluSq SINE Alu 21 297 -16 604 73 85 0 chr5 33075925 33076089 -166554061 + (TA)n Simple_repeat Simple_repeat 1 178 0 315 243 81 62 chr5 33076305 33076515 -166553635 - LTR33 LTR ERVL -6 515 302 257 270 40 61 chr5 33076597 33076745 -166553405 - LTR33 LTR ERVL -376 145 1 6929 137 45 6 chr5 33076996 33078181 -166551969 - Tigger3b DNA MER2_type 0 1231 1 383 350 49 16 chr5 33080557 33080740 -166549410 + MIR SINE MIR 19 207 -55 613 108 0 43 chr5 33080766 33080859 -166549291 - 5S rRNA rRNA -32 89 1 1436 33 22 0 chr5 33081379 33081561 -166548589 - L1P LINE L1 -3171 2975 2790 9720 27 5 0 chr5 33081561 33083481 -166546669 + L1PA3 LINE L1 4233 6155 0 32 26 0 0 chr5 33083847 33083886 -166546264 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 33085333 33085354 -166544796 + AT_rich Low_complexity Low_complexity 1 21 0 710 274 111 0 chr5 33085476 33085684 -166544466 + Charlie2 DNA MER1_type 92 322 -2540 2387 206 70 65 chr5 33085689 33086578 -166543572 + Charlie2 DNA MER1_type 1856 2752 -110 2131 124 0 0 chr5 33086578 33086884 -166543266 - AluSc SINE Alu -1 308 3 2387 206 70 65 chr5 33086884 33086987 -166543163 + Charlie2 DNA MER1_type 2752 2853 -9 275 234 87 85 chr5 33087288 33087483 -166542667 + MIR SINE MIR 2 191 -67 368 238 0 48 chr5 33088109 33088214 -166541936 - L2 LINE L2 -69 3244 3145 591 318 76 38 chr5 33088257 33088376 -166541774 - L2 LINE L2 -338 2976 2863 1388 190 129 41 chr5 33088376 33088607 -166541543 + MSTD LTR MaLR 1 277 -119 2246 101 0 0 chr5 33088607 33088895 -166541255 + AluSg SINE Alu 9 296 -14 1388 190 129 41 chr5 33088895 33089027 -166541123 + MSTD LTR MaLR 277 396 0 591 318 76 38 chr5 33089027 33089196 -166540954 - L2 LINE L2 -451 2863 2677 206 192 19 0 chr5 33091175 33091227 -166538923 + (TA)n Simple_repeat Simple_repeat 1 53 0 399 282 196 55 chr5 33091228 33091632 -166538518 - L1MC4a LINE L1 -1372 6436 5976 1031 172 104 5 chr5 33091651 33091872 -166538278 - L1MD3 LINE L1 -23 7972 7730 567 258 20 24 chr5 33091876 33092124 -166538026 - L1MC4a LINE L1 -1830 5978 5732 1977 198 33 0 chr5 33092339 33092758 -166537392 - Charlie4a DNA MER1_type -75 433 1 231 36 0 0 chr5 33092871 33092899 -166537251 + (TC)n Simple_repeat Simple_repeat 1 28 0 272 168 84 11 chr5 33092899 33092994 -166537156 + (CATATA)n Simple_repeat Simple_repeat 1 102 0 254 284 27 2 chr5 33093037 33093112 -166537038 - MIR SINE MIR -95 113 34 1041 238 110 74 chr5 33094404 33094930 -166535220 + MLT1H LTR MaLR 1 545 -4 8955 212 64 33 chr5 33095831 33098156 -166531994 + L1MDa LINE L1 1 2397 -4143 1985 188 65 7 chr5 33098134 33098275 -166531875 + L1MD1 LINE L1 6174 6305 -331 * 279 0 0 0 chr5 33098275 33098306 -166531844 + (TG)n Simple_repeat Simple_repeat 2 32 0 1985 188 65 7 chr5 33098306 33098578 -166531572 + L1MD1 LINE L1 6305 6611 -25 32 26 0 0 chr5 33098578 33098617 -166531533 + AT_rich Low_complexity Low_complexity 1 39 0 206 259 0 37 chr5 33099714 33099768 -166530382 - MER5B DNA MER1_type -1 177 126 645 294 0 11 chr5 33099768 33099948 -166530202 + MIR SINE MIR 82 259 -3 4795 127 43 17 chr5 33100032 33100644 -166529506 + LTR39 LTR ERV1 1 638 -145 1514 67 91 207 chr5 33100644 33101094 -166529056 - MER48 LTR ERV1 0 398 1 4795 127 43 17 chr5 33101094 33101244 -166528906 + LTR39 LTR ERV1 638 783 0 22 0 0 0 chr5 33101337 33101359 -166528791 + AT_rich Low_complexity Low_complexity 1 22 0 278 250 16 0 chr5 33102517 33102581 -166527569 + MIR3 SINE MIR 92 156 -52 290 300 119 0 chr5 33103142 33103267 -166526883 - MIR SINE MIR -69 139 12 2076 141 3 3 chr5 33104068 33104380 -166525770 - AluSx SINE Alu 0 312 1 198 0 0 0 chr5 33104388 33104410 -166525740 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1690 176 24 14 chr5 33104530 33104826 -166525324 + AluJb SINE Alu 1 299 -13 980 283 80 6 chr5 33105130 33105455 -166524695 - MLT1G1 LTR MaLR -186 371 67 241 286 80 9 chr5 33105470 33105582 -166524568 - L1ME LINE L1 -480 5641 5522 550 299 112 8 chr5 33105583 33105952 -166524198 - L2 LINE L2 -33 3280 2803 1158 284 123 22 chr5 33107404 33107866 -166522284 + L3 LINE CR1 625 1133 -444 612 245 80 6 chr5 33107884 33108047 -166522103 + MER5B DNA MER1_type 1 175 -3 2325 101 3 0 chr5 33108069 33108376 -166521774 - AluSp SINE Alu -5 308 1 375 322 62 62 chr5 33108428 33108813 -166521337 + L2 LINE L2 2564 2948 -366 298 344 209 0 chr5 33109178 33109422 -166520728 + L3 LINE CR1 1272 1566 -11 231 313 0 0 chr5 33110499 33110563 -166519587 + L2 LINE L2 3209 3272 0 1877 145 10 17 chr5 33110745 33111042 -166519108 + AluSx SINE Alu 1 295 -17 204 182 0 0 chr5 33112490 33112534 -166517616 + (TA)n Simple_repeat Simple_repeat 2 45 0 455 293 144 10 chr5 33112893 33113101 -166517049 - LTR33 LTR ERVL -285 236 1 292 337 0 10 chr5 33113113 33113211 -166516939 + MIR SINE MIR 160 256 -6 204 305 42 32 chr5 33113225 33113320 -166516830 + MIR3 SINE MIR 109 204 -4 2434 68 0 0 chr5 33113800 33114095 -166516055 - AluY SINE Alu -16 295 1 599 251 115 21 chr5 33114312 33114555 -166515595 + L2 LINE L2 2971 3236 -77 705 328 72 25 chr5 33114668 33115183 -166514967 - MARNA DNA Mariner -18 568 30 680 206 74 37 chr5 33115867 33115942 -166514208 + MLT1D LTR MaLR 1 72 -433 617 257 44 113 chr5 33115942 33116374 -166513776 + MER93a LTR ERV1 1 402 0 680 206 74 37 chr5 33116374 33116487 -166513663 + MLT1D LTR MaLR 72 196 -309 1866 159 83 3 chr5 33116514 33117088 -166513062 - L1M4 LINE L1 -510 5674 4963 * 1988 227 117 30 chr5 33117086 33117971 -166512179 + L1MD2 LINE L1 5184 6192 -27 238 378 142 0 chr5 33118681 33118808 -166511342 - MIR3 SINE MIR -28 180 36 1009 186 6 0 chr5 33118820 33118997 -166511153 + MER45A DNA AcHobo 1 178 0 263 344 42 0 chr5 33119671 33119767 -166510383 + MIR SINE MIR 53 152 -110 226 189 0 0 chr5 33119887 33119924 -166510226 + THE1C LTR MaLR 1 37 -338 1149 266 30 76 chr5 33120032 33120727 -166509423 + L1ME3A LINE L1 5281 5943 -227 234 277 69 79 chr5 33121212 33121414 -166508736 + L1ME3A LINE L1 5968 6167 -3 200 158 26 0 chr5 33121421 33121459 -166508691 - MIR SINE MIR -127 135 97 193 200 25 0 chr5 33122207 33122247 -166507903 - L2 LINE L2 -2 3311 3271 517 279 248 12 chr5 33123085 33123539 -166506611 + L2 LINE L2 2621 3179 -134 236 158 53 0 chr5 33123540 33123616 -166506534 + (TA)n Simple_repeat Simple_repeat 1 80 0 562 250 25 25 chr5 33123617 33123777 -166506373 + L2 LINE L2 3154 3313 0 2024 136 0 10 chr5 33124923 33125256 -166504894 - AluJb SINE Alu 0 312 1 710 214 19 0 chr5 33125478 33125632 -166504518 - MER103 DNA DNA -2 164 8 431 326 7 17 chr5 33125709 33125868 -166504282 - MIR3 SINE MIR -48 160 7 21 0 0 0 chr5 33126199 33126220 -166503930 + AT_rich Low_complexity Low_complexity 1 21 0 662 319 122 40 chr5 33126326 33126827 -166503323 + MLT1L LTR MaLR 1 542 -73 550 368 95 6 chr5 33127949 33128264 -166501886 + L3 LINE CR1 1046 1388 -189 1608 199 21 18 chr5 33128298 33128634 -166501516 + MER1B DNA MER1_type 1 337 0 265 293 195 35 chr5 33128643 33128817 -166501333 + L3 LINE CR1 1361 1562 -15 308 194 0 42 chr5 33128960 33129032 -166501118 + L2 LINE L2 3243 3311 -2 183 129 0 0 chr5 33129394 33129425 -166500725 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 5265 77 8 4 chr5 33129447 33130162 -166499988 - L1PA10 LINE L1 -1 6167 5450 234 192 0 0 chr5 33130162 33130214 -166499936 + CT-rich Low_complexity Low_complexity 2 53 0 1405 146 81 112 chr5 33130492 33130876 -166499274 + L1MA4A LINE L1 5928 6299 -4 210 253 211 11 chr5 33131086 33131181 -166498969 - MIR SINE MIR -120 142 29 337 288 50 43 chr5 33131195 33131334 -166498816 + MIR SINE MIR 104 243 -19 22 35 0 0 chr5 33132528 33132557 -166497593 + AT_rich Low_complexity Low_complexity 1 29 0 839 56 62 0 chr5 33132617 33132777 -166497373 + (TA)n Simple_repeat Simple_repeat 1 170 0 341 239 68 0 chr5 33133878 33133966 -166496184 + L1MA10 LINE L1 6241 6334 0 366 23 0 0 chr5 33135409 33135452 -166494698 + (TG)n Simple_repeat Simple_repeat 2 44 0 303 177 0 0 chr5 33135452 33135514 -166494636 + (TA)n Simple_repeat Simple_repeat 2 63 0 206 293 40 40 chr5 33137827 33137902 -166492248 + L3b LINE CR1 1393 1467 -116 2331 98 10 0 chr5 33138768 33139065 -166491085 - AluSx SINE Alu -12 300 1 1300 202 81 17 chr5 33139202 33139499 -166490651 + MER2 DNA MER2_type 2 317 -28 525 246 65 0 chr5 33141691 33141829 -166488321 - MIR SINE MIR -13 249 103 231 292 0 0 chr5 33141876 33141941 -166488209 - L1 LINE L1 -1329 4817 4753 199 385 55 0 chr5 33141946 33142037 -166488113 - MIR SINE MIR -165 97 2 937 229 100 92 chr5 33143016 33143685 -166486465 + HAL1 LINE L1 8 705 -1802 281 232 50 61 chr5 33143828 33143927 -166486223 + MIR SINE MIR 92 189 -73 316 339 42 0 chr5 33143930 33144048 -166486102 - MIR SINE MIR -23 239 117 33 0 0 0 chr5 33144561 33144594 -166485556 + AT_rich Low_complexity Low_complexity 1 33 0 4893 42 2 0 chr5 33144596 33145191 -166484959 - L1PA7 LINE L1 -5 6149 5554 10110 88 0 2 chr5 33145191 33146654 -166483496 + L1P LINE L1 3173 4632 -1514 308 264 253 28 chr5 33147724 33147803 -166482347 - MIR SINE MIR -19 243 183 459 52 0 0 chr5 33147803 33147861 -166482289 + (TAG)n Simple_repeat Simple_repeat 1 58 0 308 264 253 28 chr5 33147861 33147963 -166482187 - MIR SINE MIR -79 183 21 825 300 138 59 chr5 33148169 33148373 -166481777 - L3 LINE CR1 -124 1453 1267 2290 97 7 0 chr5 33148373 33148671 -166481479 - AluSg SINE Alu -10 300 1 825 300 138 59 chr5 33148671 33149109 -166481041 - L3 LINE CR1 -310 1267 760 312 299 31 31 chr5 33149117 33149214 -166480936 + L1PA13 LINE L1 203 299 -6488 4856 179 44 8 chr5 33149216 33150925 -166479225 + L1PA16 LINE L1 4377 6150 -16 37816 80 5 2 chr5 33151071 33157204 -166472946 - L1PA6 LINE L1 0 6154 1 703 265 5 34 chr5 33157270 33157474 -166472676 + MLT1I LTR MaLR 195 392 -17 375 23 0 0 chr5 33157669 33157713 -166472437 + (CA)n Simple_repeat Simple_repeat 2 45 0 2887 13 0 0 chr5 33158375 33158693 -166471457 - AluYb8 SINE Alu 0 318 1 22 35 0 0 chr5 33159312 33159341 -166470809 + AT_rich Low_complexity Low_complexity 1 29 0 231 167 0 0 chr5 33159413 33159455 -166470695 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1650 109 0 18 chr5 33159480 33159709 -166470441 + AluSq SINE Alu 86 310 -3 1500 207 0 14 chr5 33159709 33159989 -166470161 - AluJb SINE Alu -36 276 1 25 31 0 0 chr5 33160028 33160060 -166470090 + AT_rich Low_complexity Low_complexity 1 32 0 696 236 14 88 chr5 33160813 33160938 -166469212 + L1MC5 LINE L1 7479 7612 -349 863 224 0 0 chr5 33160938 33161090 -166469060 + FRAM SINE Alu 1 152 -14 696 236 14 88 chr5 33161090 33161384 -166468766 + L1MC5 LINE L1 7612 7867 -94 690 245 14 98 chr5 33161787 33161853 -166468297 - MIR SINE MIR 0 262 192 2048 137 51 20 chr5 33161853 33162203 -166467947 - THE1B LTR MaLR -3 361 1 11409 78 28 21 chr5 33162203 33162298 -166467852 - THE1B-int LTR MaLR 0 1580 1487 2246 122 0 7 chr5 33162298 33162602 -166467548 + AluSx SINE Alu 1 302 -10 11409 78 28 21 chr5 33162602 33164075 -166466075 - THE1B-int LTR MaLR -93 1487 1 1951 147 69 20 chr5 33164075 33164422 -166465728 - THE1B LTR MaLR 0 364 1 690 245 14 98 chr5 33164422 33164639 -166465511 - MIR SINE MIR -67 195 1 412 254 0 36 chr5 33165376 33165486 -166464664 + MIR SINE MIR 34 139 -69 541 163 135 0 chr5 33166321 33166462 -166463688 - MER53 DNA DNA -27 162 3 669 180 129 14 chr5 33166472 33166611 -166463539 - FRAM SINE Alu -11 155 1 186 43 0 0 chr5 33166724 33166747 -166463403 + (CA)n Simple_repeat Simple_repeat 1 23 0 256 229 145 37 chr5 33167842 33168056 -166462094 + L1MC5 LINE L1 7501 7737 -224 537 242 47 0 chr5 33168177 33168198 -166461952 + MIR SINE MIR 128 147 -115 2775 123 9 20 chr5 33168198 33168637 -166461513 + Tigger2a DNA MER2_type 1 434 0 537 242 47 0 chr5 33168637 33168743 -166461407 + MIR SINE MIR 147 261 -1 303 348 33 54 chr5 33168762 33168946 -166461204 - MIR3 SINE MIR -23 185 6 357 179 152 83 chr5 33169104 33169249 -166460901 + L1ME2 LINE L1 5928 6082 -82 13099 118 83 10 chr5 33169249 33169365 -166460785 - Tigger1 DNA MER2_type 0 2418 2312 2365 100 0 0 chr5 33169365 33169664 -166460486 + AluSp SINE Alu 2 300 -13 13099 118 83 10 chr5 33169664 33169756 -166460394 - Tigger1 DNA MER2_type -106 2312 2228 2253 104 3 3 chr5 33169756 33170053 -166460097 + AluSx SINE Alu 1 297 -15 13099 118 83 10 chr5 33170053 33172075 -166458075 - Tigger1 DNA MER2_type -190 2228 24 361 209 0 0 chr5 33172081 33172167 -166457983 + L1ME2 LINE L1 6079 6164 0 190 279 23 0 chr5 33172284 33172327 -166457823 - MIR SINE MIR -135 73 30 270 280 280 0 chr5 33173590 33173715 -166456435 - MIR SINE MIR -78 184 25 2316 108 0 0 chr5 33173898 33174195 -166455955 + AluSg SINE Alu 1 297 -13 1067 272 32 66 chr5 33174224 33174753 -166455397 + LTR33 LTR ERVL 11 521 0 298 309 136 75 chr5 33174821 33175197 -166454953 - L2 LINE L2 -3 3310 2912 2101 120 7 0 chr5 33175246 33175537 -166454613 - AluSq SINE Alu -20 293 1 1838 146 68 7 chr5 33175824 33176118 -166454032 + AluSx SINE Alu 1 312 0 498 255 92 9 chr5 33176253 33176427 -166453723 + MIR SINE MIR 19 202 -60 360 259 18 9 chr5 33176454 33176566 -166453584 - MLT1L LTR MaLR -29 586 474 321 275 110 18 chr5 33176776 33176885 -166453265 + L2 LINE L2 3190 3308 -5 355 264 152 22 chr5 33176944 33177122 -166453028 - MER58C DNA MER1_type -13 202 2 254 250 52 0 chr5 33177515 33177611 -166452539 + MER103 DNA DNA 11 111 -55 205 330 20 50 chr5 33178008 33178108 -166452042 - MIR SINE MIR -93 115 19 350 327 71 39 chr5 33178183 33178338 -166451812 + MIR SINE MIR 20 177 -76 2490 62 0 7 chr5 33178354 33178658 -166451492 + AluY SINE Alu 3 304 -7 422 296 15 22 chr5 33178754 33178889 -166451261 - MIR3 SINE MIR -64 144 11 993 273 61 30 chr5 33179478 33179814 -166450336 + MLT1I LTR MaLR 3 354 -55 3317 77 9 7 chr5 33179814 33180257 -166449893 - MLT2A1 LTR ERVL 0 444 1 993 273 61 30 chr5 33180257 33180315 -166449835 + MLT1I LTR MaLR 354 409 0 348 248 191 13 chr5 33180316 33180473 -166449677 + MIR SINE MIR 78 262 0 1887 130 0 0 chr5 33181106 33181368 -166448782 + AluSx SINE Alu 32 293 -19 231 235 20 0 chr5 33181768 33181819 -166448331 + L2 LINE L2 3008 3059 -213 2503 233 113 19 chr5 33183074 33184123 -166446027 - Charlie2a DNA MER1_type 0 2862 1715 1055 195 183 12 chr5 33184724 33184975 -166445175 - AluJo SINE Alu -8 294 1 249 33 0 0 chr5 33185032 33185062 -166445088 + (TG)n Simple_repeat Simple_repeat 2 31 0 1596 200 19 0 chr5 33185065 33185335 -166444815 - AluJo SINE Alu -37 275 1 287 216 125 34 chr5 33185354 33185442 -166444708 - L2 LINE L2 -4 3309 3214 1332 257 157 8 chr5 33185447 33185937 -166444213 - L2 LINE L2 -889 2425 1863 1817 212 37 0 chr5 33186058 33186440 -166443710 - MSTD LTR MaLR 0 396 1 1115 226 81 53 chr5 33186446 33186876 -166443274 + MER39 LTR ERV1 262 703 -4 1484 285 86 23 chr5 33186884 33187410 -166442740 - L2 LINE L2 -1458 1856 1298 1780 141 67 23 chr5 33187411 33187770 -166442380 - MSTA LTR MaLR 0 375 1 3833 179 32 6 chr5 33187770 33188483 -166441667 - MSTA-int LTR MaLR 0 1651 920 2581 152 9 0 chr5 33188483 33188925 -166441225 - MSTA-int LTR MaLR -1205 446 1 2568 107 54 10 chr5 33188925 33189335 -166440815 - MSTA LTR MaLR 0 428 1 462 354 29 17 chr5 33189336 33189511 -166440639 - L2 LINE L2 -2014 1300 1124 500 265 27 45 chr5 33189755 33189854 -166440296 + L1ME1 LINE L1 5942 6041 -125 2174 168 51 19 chr5 33189854 33190265 -166439885 - MSTB LTR MaLR 0 426 3 500 265 27 45 chr5 33190265 33190388 -166439762 + L1ME1 LINE L1 6041 6160 -6 525 71 0 0 chr5 33190445 33190515 -166439635 + (TA)n Simple_repeat Simple_repeat 1 70 0 2237 118 0 3 chr5 33190549 33190929 -166439221 + AluSg SINE Alu 4 382 0 451 228 31 39 chr5 33190969 33191096 -166439054 - Charlie2 DNA MER1_type -2442 340 215 847 92 171 6 chr5 33191112 33191276 -166438874 - L1MA5 LINE L1 -2 6298 6108 2024 160 3 3 chr5 33191276 33191589 -166438561 + AluSq SINE Alu 1 313 0 23613 86 6 6 chr5 33191590 33195276 -166434874 + L1PA6 LINE L1 6 3686 -2468 279 0 0 0 chr5 33195276 33195307 -166434843 + (CA)n Simple_repeat Simple_repeat 2 32 0 23613 86 6 6 chr5 33195307 33197771 -166432379 + L1PA6 LINE L1 3686 6148 -6 1416 130 40 0 chr5 33197781 33198034 -166432116 - L1MA5 LINE L1 -175 6125 5863 237 319 50 39 chr5 33198034 33198216 -166431934 - Charlie2 DNA MER1_type -2572 210 27 284 192 0 0 chr5 33198490 33198542 -166431608 - MER66A LTR ERV1 -140 338 287 216 362 0 64 chr5 33198895 33198989 -166431161 - MIR SINE MIR -76 132 45 2653 137 70 2 chr5 33198989 33199443 -166430707 - MER31A LTR ERV1 0 485 1 255 210 76 1 chr5 33201883 33202011 -166428139 + MLT1I LTR MaLR 1 142 -267 235 324 98 17 chr5 33202179 33202352 -166427798 + MLT1H LTR MaLR 347 533 -16 346 338 56 0 chr5 33202382 33202524 -166427626 + MIR SINE MIR 102 251 -11 318 26 0 0 chr5 33202569 33202608 -166427542 + (TG)n Simple_repeat Simple_repeat 1 39 0 198 0 0 0 chr5 33202607 33202629 -166427521 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 601 258 93 31 chr5 33203469 33203633 -166426517 + MIR SINE MIR 56 235 -27 1834 118 38 79 chr5 33203633 33204024 -166426126 + THE1C LTR MaLR 1 375 0 601 258 93 31 chr5 33204024 33204053 -166426097 + MIR SINE MIR 235 261 -1 28 61 0 0 chr5 33204054 33204103 -166426047 + AT_rich Low_complexity Low_complexity 1 49 0 2372 85 0 25 chr5 33205297 33205616 -166424534 - AluY SINE Alu 0 311 1 1050 238 5 14 chr5 33206232 33206455 -166423695 + MER58A DNA MER1_type 4 224 0 228 214 29 97 chr5 33206463 33206566 -166423584 + HAL1 LINE L1 2058 2153 -354 434 175 0 0 chr5 33206994 33207074 -166423076 + MLT1A1 LTR MaLR 1 80 -285 6505 68 8 2 chr5 33207074 33208168 -166421982 + L1PA8A LINE L1 5026 6124 -7 531 69 0 0 chr5 33208173 33208245 -166421905 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 1129 167 6 130 chr5 33208245 33208568 -166421582 + MLT1A1 LTR MaLR 83 365 0 238 235 0 0 chr5 33208647 33208698 -166421452 - MER5A DNA MER1_type -138 51 1 189 341 123 43 chr5 33208826 33208964 -166421186 + MIR SINE MIR 49 197 -65 23 0 0 0 chr5 33208992 33209015 -166421135 + AT_rich Low_complexity Low_complexity 1 23 0 1352 210 37 23 chr5 33209520 33209873 -166420277 + THE1C LTR MaLR 1 358 -17 1474 244 5 5 chr5 33210425 33210823 -166419327 + L1M4 LINE L1 2459 2856 -3290 193 333 69 0 chr5 33210933 33211005 -166419145 - L2 LINE L2 -95 3177 3101 1771 199 10 0 chr5 33211359 33211660 -166418490 - AluJb SINE Alu -8 304 1 225 228 211 0 chr5 33211714 33211771 -166418379 + L2 LINE L2 3238 3306 -7 221 287 17 43 chr5 33212325 33212440 -166417710 + MIR3 SINE MIR 95 206 -2 285 121 133 60 chr5 33213260 33213343 -166416807 - MER103 DNA DNA -19 147 59 1811 176 0 0 chr5 33213672 33213950 -166416200 + AluSx SINE Alu 1 278 -34 207 0 0 0 chr5 33213955 33213978 -166416172 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2193 140 7 0 chr5 33214116 33214423 -166415727 + AluSx SINE Alu 1 309 -3 981 206 37 19 chr5 33215019 33215233 -166414917 - MER20 DNA MER1_type -1 218 1 1601 153 52 55 chr5 33215310 33215675 -166414475 + THE1B LTR MaLR 1 364 0 204 347 73 27 chr5 33215952 33216102 -166414048 - MIR3 SINE MIR -25 183 27 1655 187 3 11 chr5 33217520 33217830 -166412320 - AluJo SINE Alu 0 309 2 303 240 53 13 chr5 33217834 33217909 -166412241 - L2 LINE L2 -16 3297 3220 2521 91 0 0 chr5 33218064 33218373 -166411777 + AluSg SINE Alu 1 309 -1 251 239 15 0 chr5 33218473 33218540 -166411610 + L1ME4a LINE L1 5969 6036 -85 1177 128 66 0 chr5 33218588 33218799 -166411351 - Tigger7 DNA MER2_type -1 2490 2266 * 1184 240 39 0 chr5 33218795 33219053 -166411097 - Tigger7 DNA MER2_type -465 268 1 744 226 24 0 chr5 33220744 33220908 -166409242 + MER58A DNA MER1_type 49 216 -8 1291 117 0 0 chr5 33221640 33221820 -166408330 - AluSp SINE Alu -1 312 133 637 263 129 0 chr5 33221911 33222105 -166408045 + MIR SINE MIR 19 237 -25 1071 149 0 0 chr5 33222159 33222334 -166407816 + MER58B DNA MER1_type 167 341 0 2366 79 0 10 chr5 33222707 33223011 -166407139 - AluY SINE Alu -8 303 3 460 61 0 15 chr5 33223027 33223093 -166407057 - L1PA16 LINE L1 -10 6156 6092 191 243 95 27 chr5 33224929 33225003 -166405147 - MIR SINE MIR -68 194 116 226 325 86 68 chr5 33225896 33226059 -166404091 + MIR3 SINE MIR 19 184 -24 336 287 127 27 chr5 33226213 33226363 -166403787 - MIR3 SINE MIR -14 194 30 317 58 69 23 chr5 33226614 33226701 -166403449 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 284 284 231 53 chr5 33226888 33227191 -166402959 + MLT1K LTR MaLR 115 471 -117 1927 132 10 27 chr5 33227274 33227569 -166402581 + AluSx SINE Alu 1 290 -22 5510 130 12 5 chr5 33227796 33229218 -166400932 - L1PA15 LINE L1 -6 6159 4734 3855 197 16 14 chr5 33229218 33230495 -166399655 - L1PA12 LINE L1 -3963 3621 2321 317 325 58 25 chr5 33231500 33231744 -166398406 - L1PA12 LINE L1 -6595 990 1 2583 132 5 0 chr5 33231994 33232442 -166397708 - L1P LINE L1 -1013 5133 4684 209 108 27 0 chr5 33232462 33232499 -166397651 + GA-rich Low_complexity Low_complexity 2 39 0 2389 90 0 0 chr5 33232510 33232809 -166397341 + AluY SINE Alu 1 299 -12 5813 82 7 27 chr5 33232812 33233694 -166396456 + L1PA10 LINE L1 5305 6168 0 414 273 95 24 chr5 33233749 33233974 -166396176 + MLT1J LTR MaLR 1 237 -275 914 228 56 19 chr5 33234035 33234250 -166395900 + MER58A DNA MER1_type 2 224 0 1159 232 55 27 chr5 33234678 33235124 -166395026 + MLT2B1 LTR ERVL 1 495 -20 295 121 35 0 chr5 33235154 33235212 -166394938 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 1001 209 23 27 chr5 33235567 33235787 -166394363 + MER20 DNA MER1_type 1 219 0 2204 178 15 10 chr5 33236126 33236520 -166393630 - MSTD LTR MaLR 0 396 1 266 239 100 31 chr5 33236648 33236778 -166393372 - MIR SINE MIR -4 258 120 532 264 50 13 chr5 33237463 33237622 -166392528 + MER45A DNA AcHobo 6 170 -8 775 299 96 15 chr5 33237625 33238106 -166392044 - ERVL LTR ERVL -426 5338 4819 678 167 44 0 chr5 33238253 33238405 -166391745 + FLAM_C SINE Alu 1 157 0 1945 120 70 22 chr5 33238432 33238790 -166391360 + THE1C LTR MaLR 1 375 0 4136 47 10 2 chr5 33239061 33239721 -166390429 - L1PA5 LINE L1 -650 5504 4841 5626 31 0 0 chr5 33239721 33240362 -166389788 + L1PA5 LINE L1 5493 6146 -8 239 246 191 55 chr5 33240867 33240977 -166389173 - L2 LINE L2 -10 3303 3179 1441 179 0 35 chr5 33241005 33241262 -166388888 + AluJb SINE Alu 48 295 -17 1123 187 0 11 chr5 33241278 33241465 -166388685 + AluJo SINE Alu 118 302 -10 225 0 0 0 chr5 33241504 33241515 -166388635 + (CA)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr5 33241515 33241540 -166388610 + (CA)n Simple_repeat Simple_repeat 2 26 0 281 361 58 5 chr5 33241701 33241909 -166388241 - ERVL LTR ERVL -560 5204 4986 328 287 11 0 chr5 33241956 33242043 -166388107 + L1MC4 LINE L1 6616 6703 -1339 1139 164 250 27 chr5 33242140 33242618 -166387532 - LTR29 LTR ERV1 0 607 1 198 354 88 0 chr5 33242884 33242997 -166387153 - L2 LINE L2 -549 2765 2643 323 281 116 49 chr5 33244201 33244365 -166385785 - MIR3 SINE MIR 0 208 34 198 0 0 0 chr5 33245214 33245236 -166384914 + (T)n Simple_repeat Simple_repeat 1 22 0 548 232 40 73 chr5 33245355 33245436 -166384714 - MIR SINE MIR -1 261 179 1805 65 119 8 chr5 33245436 33245697 -166384453 - AluSc SINE Alu -19 290 1 548 232 40 73 chr5 33245697 33245792 -166384358 - MIR SINE MIR -83 179 91 264 288 92 65 chr5 33246041 33246194 -166383956 + MIR3 SINE MIR 16 172 -36 480 35 0 0 chr5 33246197 33246255 -166383895 + (TC)n Simple_repeat Simple_repeat 1 58 0 2476 47 0 22 chr5 33246371 33246689 -166383461 - AluY SINE Alu 0 311 1 25 31 0 0 chr5 33246840 33246872 -166383278 + AT_rich Low_complexity Low_complexity 1 32 0 2053 137 56 22 chr5 33246908 33247317 -166382833 + L1MB8 LINE L1 5740 6162 -16 21 57 0 0 chr5 33248103 33248138 -166382012 + AT_rich Low_complexity Low_complexity 1 35 0 614 191 16 32 chr5 33249926 33250052 -166380098 + FAM SINE Alu 42 165 -20 1981 149 0 0 chr5 33250136 33250441 -166379709 - AluSx SINE Alu 0 305 1 258 192 0 0 chr5 33252201 33252253 -166377897 + (TA)n Simple_repeat Simple_repeat 2 53 0 2638 45 0 10 chr5 33252325 33252637 -166377513 - AluY SINE Alu -2 309 1 498 203 102 0 chr5 33252637 33252765 -166377385 + MER58C DNA MER1_type 71 211 -4 24 53 0 0 chr5 33253070 33253108 -166377042 + AT_rich Low_complexity Low_complexity 1 38 0 211 388 103 0 chr5 33253462 33253627 -166376523 - MIR3 SINE MIR -23 185 4 2124 124 3 0 chr5 33253715 33254013 -166376137 + AluSx SINE Alu 1 299 -13 2404 53 3 10 chr5 33254256 33254555 -166375595 - AluY SINE Alu -14 297 1 643 168 48 16 chr5 33255728 33255853 -166374297 + FLAM_A SINE Alu 5 133 0 23 33 0 0 chr5 33256061 33256091 -166374059 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr5 33256146 33256168 -166373982 + (T)n Simple_repeat Simple_repeat 1 22 0 2214 120 0 10 chr5 33256593 33256901 -166373249 - AluSx SINE Alu -7 305 1 288 193 18 0 chr5 33259743 33259800 -166370350 + AluJb SINE Alu 190 247 -55 1238 157 9 14 chr5 33259800 33260010 -166370140 - AluJo SINE Alu -99 213 5 292 286 29 29 chr5 33260603 33260708 -166369442 - MIR3 SINE MIR -23 185 81 286 285 87 39 chr5 33262297 33262504 -166367646 - L1ME LINE L1 -347 5823 5607 244 154 200 0 chr5 33262943 33263008 -166367142 - AluJo SINE Alu -1 301 224 1036 180 0 28 chr5 33263008 33263186 -166366964 - AluJo SINE Alu -139 173 1 797 228 11 17 chr5 33266965 33267145 -166363005 - AluJo SINE Alu -12 300 122 830 160 100 0 chr5 33267551 33267701 -166362449 + FAM SINE Alu 4 168 -7 2279 77 40 3 chr5 33267709 33268008 -166362142 + AluY SINE Alu 1 310 -1 32 43 0 0 chr5 33270015 33270061 -166360089 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr5 33270975 33270998 -166359152 + AT_rich Low_complexity Low_complexity 1 23 0 1426 156 141 8 chr5 33271510 33271773 -166358377 - AluJb SINE Alu -4 298 1 1840 200 73 65 chr5 33271825 33272375 -166357775 + MLT2B3 LTR ERVL 1 554 0 1756 175 0 29 chr5 33272765 33273074 -166357076 - AluJb SINE Alu -10 302 3 313 190 281 33 chr5 33273624 33273745 -166356405 - MER5A DNA MER1_type -1 188 38 27 0 0 0 chr5 33273806 33273833 -166356317 + AT_rich Low_complexity Low_complexity 1 27 0 1379 178 23 23 chr5 33273984 33274242 -166355908 - AluJo SINE Alu -51 261 4 302 223 159 43 chr5 33274280 33274513 -166355637 - HAL1 LINE L1 -224 2283 2024 2118 139 0 3 chr5 33274528 33274830 -166355320 + AluSx SINE Alu 1 301 -11 1692 186 21 3 chr5 33274840 33275130 -166355020 + AluJb SINE Alu 1 295 -17 651 181 0 0 chr5 33275155 33275260 -166354890 + FLAM_C SINE Alu 1 105 -38 342 267 135 20 chr5 33275262 33275565 -166354585 - HAL1 LINE L1 -938 1569 1232 446 236 150 64 chr5 33275572 33275839 -166354311 - HAL1 LINE L1 -1355 1152 863 4503 147 75 12 chr5 33275955 33276800 -166353350 + MER4D LTR ERV1 1 898 -5 365 252 135 58 chr5 33276928 33277224 -166352926 + MLT1L LTR MaLR 208 437 -74 879 164 26 0 chr5 33277337 33277489 -166352661 + FRAM SINE Alu 1 155 -21 2541 113 11 5 chr5 33277513 33277886 -166352264 - THE1C LTR MaLR 0 375 1 246 317 192 0 chr5 33278525 33278629 -166351521 + MIR SINE MIR 26 149 -113 1852 139 174 8 chr5 33278634 33279001 -166351149 + MSTA LTR MaLR 1 428 0 237 271 141 12 chr5 33279409 33279494 -166350656 - LTR67 LTR ERVL -412 145 50 482 288 40 45 chr5 33279514 33279612 -166350538 - MER34 LTR ERV1 -30 512 415 2306 176 54 120 chr5 33279612 33280389 -166349761 + LTR8A LTR ERV1 2 727 0 482 288 40 45 chr5 33280389 33280512 -166349638 - MER34 LTR ERV1 -127 415 292 2342 96 3 0 chr5 33280521 33280823 -166349327 - AluSg SINE Alu -7 303 1 376 326 85 13 chr5 33280888 33281124 -166349026 - MER34 LTR ERV1 -278 264 12 207 0 0 0 chr5 33281485 33281508 -166348642 + (T)n Simple_repeat Simple_repeat 1 23 0 270 333 96 45 chr5 33281562 33281739 -166348411 + MER5A DNA MER1_type 4 189 0 35 24 0 0 chr5 33281770 33281812 -166348338 + AT_rich Low_complexity Low_complexity 1 42 0 295 287 198 0 chr5 33282171 33282328 -166347822 - MER5A DNA MER1_type 0 189 2 203 149 0 21 chr5 33282623 33282670 -166347480 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 1890 167 50 26 chr5 33282684 33283067 -166347083 - MER57A LTR ERV1 0 403 12 1279 144 159 30 chr5 33283116 33283386 -166346764 + AluSg SINE Alu 1 305 -5 780 194 33 4 chr5 33283391 33283715 -166346435 + MLT1D LTR MaLR 9 378 -127 473 141 6 65 chr5 33283738 33283908 -166346242 + GA-rich Low_complexity Low_complexity 5 164 0 236 339 0 0 chr5 33283919 33283981 -166346169 + polypurine Low_complexity Low_complexity 4 65 0 265 252 13 26 chr5 33283982 33284137 -166346013 + GA-rich Low_complexity Low_complexity 4 156 0 283 264 6 22 chr5 33284150 33284328 -166345822 + GA-rich Low_complexity Low_complexity 2 176 0 882 222 16 0 chr5 33285745 33285930 -166344220 - MER5A DNA MER1_type 0 189 2 1189 49 12 12 chr5 33287141 33287303 -166342847 - L1PA6 LINE L1 0 6154 5993 267 137 0 0 chr5 33287396 33287447 -166342703 + L1MC4 LINE L1 7986 8036 -6 190 0 32 32 chr5 33287577 33287608 -166342542 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2280 94 0 16 chr5 33287663 33287970 -166342180 - AluSx SINE Alu -10 302 1 267 200 0 0 chr5 33287971 33288016 -166342134 - L1ME1 LINE L1 -56 6110 6066 317 246 0 0 chr5 33289331 33289396 -166340754 + MIR SINE MIR 92 156 -106 458 169 28 113 chr5 33289481 33289623 -166340527 - MER5C DNA MER1_type 0 324 195 25 31 0 0 chr5 33289683 33289715 -166340435 + AT_rich Low_complexity Low_complexity 1 32 0 2306 121 0 3 chr5 33289917 33290230 -166339920 - AluSx SINE Alu 0 312 1 270 333 50 0 chr5 33290348 33290447 -166339703 - MER5C DNA MER1_type -219 105 2 * 396 208 0 0 chr5 33290447 33290519 -166339631 - MIR SINE MIR -45 217 146 2272 104 3 22 chr5 33291307 33291625 -166338525 + AluSx SINE Alu 1 312 0 565 180 107 16 chr5 33292019 33292141 -166338009 - FRAM SINE Alu -43 133 1 31 0 0 0 chr5 33292146 33292177 -166337973 + AT_rich Low_complexity Low_complexity 1 31 0 653 197 163 0 chr5 33292203 33292381 -166337769 + Tigger5 DNA MER2_type 2117 2323 0 369 0 0 0 chr5 33292407 33292448 -166337702 + (TG)n Simple_repeat Simple_repeat 2 42 0 266 259 12 12 chr5 33292448 33292533 -166337617 - L1MC4 LINE L1 -149 7893 7809 729 211 155 10 chr5 33292561 33292755 -166337395 + MER97b DNA MER1_type? 13 234 -819 1307 174 81 68 chr5 33292768 33293199 -166336951 + LTR48 LTR ERV1 1 451 -246 1912 137 81 0 chr5 33293199 33293556 -166336594 + LTR24C LTR ERV1 248 633 -2 1796 185 7 0 chr5 33293632 33293929 -166336221 + AluJb SINE Alu 1 299 -13 672 196 18 0 chr5 33294026 33294138 -166336012 - FLAM_A SINE Alu -19 114 1 297 272 87 0 chr5 33294230 33294333 -166335817 + MIR SINE MIR 90 201 -61 * 468 264 104 0 chr5 33294310 33294454 -166335696 - MIR SINE MIR -12 250 92 311 299 18 55 chr5 33294533 33294697 -166335453 - MER52A LTR ERV1 -6 1749 1592 * 878 223 3 106 chr5 33294695 33294987 -166335163 - MER52A LTR ERV1 -285 1470 1209 * 1922 185 24 18 chr5 33294968 33295606 -166334544 - LTR28 LTR ERV1 -141 495 1 666 151 50 8 chr5 33295634 33295753 -166334397 + FLAM_C SINE Alu 3 126 -7 351 0 0 0 chr5 33295762 33295801 -166334349 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 773 240 6 6 chr5 33295817 33295988 -166334162 + MER92B LTR ERV1 1 171 -465 980 179 97 151 chr5 33295995 33296330 -166333820 - LTR29 LTR ERV1 -46 576 271 204 40 0 0 chr5 33296330 33296355 -166333795 + (TC)n Simple_repeat Simple_repeat 2 26 0 980 179 97 151 chr5 33296355 33296484 -166333666 - LTR29 LTR ERV1 -351 271 137 228 313 10 10 chr5 33296489 33296585 -166333565 - MER34 LTR ERV1 -446 96 1 * 1536 165 92 104 chr5 33296585 33296895 -166333255 + MER92B LTR ERV1 157 460 -176 1507 166 21 46 chr5 33296895 33297179 -166332971 - AluJo SINE Alu -35 277 1 1536 165 92 104 chr5 33297179 33297354 -166332796 + MER92B LTR ERV1 460 636 0 2295 175 75 124 chr5 33297474 33298239 -166331911 - LTR8A LTR ERV1 0 727 1 316 292 130 38 chr5 33298263 33298448 -166331702 - LTR33 LTR ERVL -3 518 317 2392 180 22 24 chr5 33298550 33298563 -166331587 + MER65C LTR ERV1 1 13 -448 3001 156 36 39 chr5 33298563 33298941 -166331209 + LTR26B LTR ERV1 1 378 -153 1977 158 0 7 chr5 33298941 33299244 -166330906 + AluSx SINE Alu 1 301 -11 3001 156 36 39 chr5 33299244 33299398 -166330752 + LTR26B LTR ERV1 378 531 0 2392 180 22 24 chr5 33299398 33299846 -166330304 + MER65C LTR ERV1 13 461 0 225 184 0 0 chr5 33300153 33300191 -166329959 - LTR16A1 LTR ERVL 0 457 420 344 300 29 12 chr5 33300222 33300392 -166329758 + L1MC4a LINE L1 4034 4206 -1940 298 276 92 75 chr5 33300388 33300562 -166329588 + L1MC4a LINE L1 5422 5598 -2210 * 572 258 47 25 chr5 33300621 33300866 -166329284 + L1MC4a LINE L1 5692 5943 -178 3073 171 55 4 chr5 33301762 33302289 -166327861 - MER21A LTR ERV1 0 931 378 517 178 107 12 chr5 33302295 33302489 -166327661 - MER21A LTR ERV1 -667 264 14 257 255 20 0 chr5 33302495 33302597 -166327553 + (TATATG)n Simple_repeat Simple_repeat 1 104 0 625 231 8 8 chr5 33302937 33303067 -166327083 - FLAM_A SINE Alu -3 130 1 550 262 40 48 chr5 33303176 33303424 -166326726 - MER34B LTR ERV1 0 565 320 2242 120 0 3 chr5 33303449 33303758 -166326392 - AluSc SINE Alu -1 308 1 207 100 0 0 chr5 33303763 33303793 -166326357 + (T)n Simple_repeat Simple_repeat 1 30 0 1591 204 10 13 chr5 33303797 33304110 -166326040 - AluJb SINE Alu 0 312 1 2178 106 0 7 chr5 33304137 33304440 -166325710 + AluSx SINE Alu 2 302 0 322 261 70 26 chr5 33304549 33304664 -166325486 - MER34B LTR ERV1 -445 120 1 377 337 17 11 chr5 33305366 33305544 -166324606 - L1ME LINE L1 -429 5692 5514 1008 172 50 10 chr5 33305947 33306145 -166324005 + AluJo SINE Alu 107 312 0 346 186 0 12 chr5 33306168 33306254 -166323896 - L1MA7 LINE L1 0 6291 6207 658 142 42 0 chr5 33306482 33306602 -166323548 - L1MA6 LINE L1 -80 6220 6096 283 254 111 56 chr5 33306665 33306791 -166323359 - MER5A DNA MER1_type -56 133 1 476 293 25 13 chr5 33307057 33307214 -166322936 - MLT1G1 LTR MaLR -7 588 430 537 260 32 13 chr5 33307309 33307463 -166322687 - MLT1H1 LTR MaLR -367 188 32 27 49 0 0 chr5 33307607 33307648 -166322502 + AT_rich Low_complexity Low_complexity 1 41 0 2281 120 0 0 chr5 33310121 33310430 -166319720 - AluSq SINE Alu -4 309 1 579 212 0 17 chr5 33310635 33310753 -166319397 + MLT1F LTR MaLR 1 116 -426 408 285 13 7 chr5 33310859 33311010 -166319140 + MER103 DNA DNA 13 164 -2 2236 111 0 7 chr5 33311090 33311388 -166318762 + AluSx SINE Alu 1 296 -16 25 75 0 0 chr5 33311669 33311722 -166318428 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr5 33311872 33311897 -166318253 + AT_rich Low_complexity Low_complexity 1 25 0 1893 174 0 7 chr5 33311897 33312207 -166317943 - AluJb SINE Alu -4 308 1 2279 103 33 43 chr5 33312684 33313052 -166317098 - THE1B LTR MaLR 0 364 1 1661 199 0 7 chr5 33313237 33313539 -166316611 - AluJo SINE Alu -10 302 3 3687 213 20 50 chr5 33313558 33314502 -166315648 + MER31-int LTR ERV1 3329 4244 -692 310 245 93 29 chr5 33314506 33314645 -166315505 + LTR37A LTR ERV1 1 148 -278 3620 148 43 50 chr5 33315115 33315370 -166314780 - L1MA7 LINE L1 -303 5988 5733 2530 52 0 16 chr5 33315370 33315676 -166314474 + AluY SINE Alu 1 301 -10 3620 148 43 50 chr5 33315676 33316632 -166313518 - L1MA7 LINE L1 -558 5733 4785 279 0 0 0 chr5 33316803 33316834 -166313316 + (TG)n Simple_repeat Simple_repeat 1 31 0 386 271 129 39 chr5 33317012 33317167 -166312983 + MER5A DNA MER1_type 16 184 -5 2819 164 39 30 chr5 33317241 33317396 -166312754 + MER89 LTR ERV1 4 156 -403 1877 157 7 10 chr5 33317396 33317689 -166312461 - AluJb SINE Alu -20 292 1 2819 164 39 30 chr5 33317689 33318075 -166312075 + MER89 LTR ERV1 156 550 -9 2001 138 0 23 chr5 33318643 33318948 -166311202 - AluSx SINE Alu -14 298 1 369 247 10 10 chr5 33320014 33320111 -166310039 + MER115 DNA AcHobo 597 693 0 4673 115 86 118 chr5 33320445 33321866 -166308284 - pTR5 LTR ERV1 0 2438 743 2116 186 65 108 chr5 33322358 33323051 -166307099 + LTR8A LTR ERV1 1 663 -64 553 110 0 0 chr5 33324745 33324818 -166305332 + FRAM SINE Alu 70 142 -34 2500 110 31 6 chr5 33325084 33325439 -166304711 + THE1B LTR MaLR 1 364 0 675 218 40 17 chr5 33325502 33325676 -166304474 - LTR16C LTR ERVL -15 476 299 559 175 132 9 chr5 33325929 33326043 -166304107 + MER5A DNA MER1_type 3 130 -59 1387 198 31 42 chr5 33326045 33326399 -166303751 - L1ME2 LINE L1 -145 6019 5670 583 220 53 8 chr5 33326528 33326660 -166303490 + MER82 DNA MER2_type 294 431 -222 2262 114 7 0 chr5 33326668 33326974 -166303176 + AluSx SINE Alu 1 308 -4 428 211 266 0 chr5 33327007 33327116 -166303034 + MER82 DNA MER2_type 510 647 -6 1590 178 45 14 chr5 33327146 33327313 -166302837 - AluJo SINE Alu -17 295 114 468 0 0 0 chr5 33327313 33327365 -166302785 + (TA)n Simple_repeat Simple_repeat 2 53 0 1590 178 45 14 chr5 33327365 33327483 -166302667 - AluJo SINE Alu -198 114 1 792 169 15 0 chr5 33327489 33327619 -166302531 - FLAM_C SINE Alu -1 132 1 1084 181 18 53 chr5 33328440 33328666 -166301484 - MER20 DNA MER1_type 0 219 2 192 317 0 0 chr5 33328739 33328799 -166301351 - L2 LINE L2 -218 3054 2995 239 276 0 26 chr5 33333546 33333622 -166296528 + MLT1H LTR MaLR 95 168 -381 3036 84 28 56 chr5 33333851 33334350 -166295800 + L1PB2 LINE L1 5666 6150 -1 532 312 45 10 chr5 33334432 33334631 -166295519 - MIR SINE MIR -51 211 6 2457 80 7 0 chr5 33334679 33334979 -166295171 + AluSq SINE Alu 1 302 -11 2126 108 10 20 chr5 33335843 33336140 -166294010 - AluSx SINE Alu -18 294 1 1222 251 26 62 chr5 33336760 33337226 -166292924 + MLT1C LTR MaLR 2 450 -17 268 277 124 36 chr5 33337302 33337512 -166292638 - MIR SINE MIR -15 247 21 266 283 71 9 chr5 33338176 33338289 -166291861 + L2 LINE L2 3153 3272 0 461 228 235 0 chr5 33339314 33339463 -166290687 - MER5A DNA MER1_type -2 187 4 471 323 47 17 chr5 33339626 33339861 -166290289 + L2 LINE L2 2243 2484 -830 535 342 46 26 chr5 33340041 33340348 -166289802 + LTR16A1 LTR ERVL 141 453 -4 23 0 0 0 chr5 33340519 33340542 -166289608 + AT_rich Low_complexity Low_complexity 1 23 0 229 210 37 37 chr5 33341242 33341323 -166288827 + MLT1K LTR MaLR 183 263 -325 1007 155 12 6 chr5 33342061 33342222 -166287928 - AluSg/x SINE Alu -22 290 129 313 222 59 111 chr5 33342329 33342482 -166287668 - HAL1 LINE L1 -2342 165 21 233 158 0 0 chr5 33343228 33343266 -166286884 - LTR65 LTR ERV1 -285 384 347 2117 138 47 11 chr5 33343994 33344356 -166285794 - THE1C LTR MaLR 0 375 1 2277 125 0 0 chr5 33344853 33345156 -166284994 - AluSx SINE Alu -9 303 1 33952 83 4 14 chr5 33345740 33351938 -166278212 + L1PA6 LINE L1 5 6154 0 959 222 16 0 chr5 33353158 33353343 -166276807 + MER5A DNA MER1_type 2 189 0 330 349 54 12 chr5 33354227 33354393 -166275757 + MIR SINE MIR 42 214 -48 297 0 0 0 chr5 33354627 33354660 -166275490 + (CA)n Simple_repeat Simple_repeat 1 33 0 272 266 83 0 chr5 33355519 33355628 -166274522 + MIR SINE MIR 66 183 -79 191 423 8 0 chr5 33356463 33356593 -166273557 + L2 LINE L2 2938 3068 -245 323 342 36 36 chr5 33358184 33358341 -166271809 + MIR3 SINE MIR 3 163 -45 917 158 6 6 chr5 33358589 33358752 -166271398 - L1 LINE L1 -1284 4862 4697 7045 67 11 10 chr5 33358752 33359803 -166270347 + L1PA13 LINE L1 5108 6160 -3 200 152 0 0 chr5 33359879 33359912 -166270238 - MIR SINE MIR -14 248 216 345 331 126 30 chr5 33360013 33360276 -166269874 - L2 LINE L2 -181 3091 2804 265 325 33 25 chr5 33360493 33360613 -166269537 + Tigger8 DNA MER2_type 539 659 -7 1727 169 3 17 chr5 33361181 33361476 -166268674 - AluSx SINE Alu -21 291 1 256 167 90 39 chr5 33361485 33361563 -166268587 + MER104 DNA Tc2 35 116 -64 381 302 22 50 chr5 33362030 33362212 -166267938 - MIR SINE MIR -57 205 29 1617 146 102 50 chr5 33362400 33362916 -166267234 + LTR18B LTR ERVL 1 591 -23 826 164 16 8 chr5 33363438 33363566 -166266584 + AluJb SINE Alu 163 291 -21 3715 127 27 14 chr5 33363637 33364157 -166265993 + MER1A DNA MER1_type 1 527 0 2224 129 3 0 chr5 33365526 33365836 -166264314 + AluSx SINE Alu 1 311 -1 5439 40 3 0 chr5 33366239 33366860 -166263290 + L1PA5 LINE L1 5532 6154 0 430 284 35 47 chr5 33367186 33367355 -166262795 + MER5B DNA MER1_type 6 172 -6 1708 187 7 0 chr5 33367427 33367716 -166262434 + AluJo SINE Alu 1 291 -21 561 188 169 0 chr5 33367989 33368143 -166262007 - MER5A DNA MER1_type -1 188 9 2095 138 3 0 chr5 33368561 33368857 -166261293 - AluSx SINE Alu -15 297 1 1108 231 63 7 chr5 33369135 33369404 -166260746 + MLT1H LTR MaLR 6 289 -260 705 269 109 0 chr5 33369716 33369917 -166260233 - MIR SINE MIR -10 252 30 233 318 75 30 chr5 33370103 33370304 -166259846 - L2 LINE L2 -213 3059 2850 360 288 29 29 chr5 33370594 33370733 -166259417 - MER20 DNA MER1_type -17 202 64 23 0 0 0 chr5 33371069 33371092 -166259058 + AT_rich Low_complexity Low_complexity 1 23 0 1816 139 25 7 chr5 33371092 33371373 -166258777 - AluSx SINE Alu -26 286 1 186 71 0 0 chr5 33371586 33371614 -166258536 + (T)n Simple_repeat Simple_repeat 1 28 0 1469 186 18 21 chr5 33372114 33372393 -166257757 + AluJo SINE Alu 12 289 -23 250 314 77 39 chr5 33372410 33372617 -166257533 + L2 LINE L2 2454 2668 -646 1130 213 79 50 chr5 33372618 33373036 -166257114 + MLT1J1 LTR MaLR 2 431 -15 469 324 53 6 chr5 33373820 33373990 -166256160 + MIR SINE MIR 25 202 -60 44731 39 1 2 chr5 33374577 33380686 -166249464 + L1PA3 LINE L1 53 6155 0 357 317 24 0 chr5 33381277 33381400 -166248750 - MIR3 SINE MIR -2 206 81 21 0 0 0 chr5 33384859 33384880 -166245270 + AT_rich Low_complexity Low_complexity 1 21 0 190 302 63 0 chr5 33385615 33385678 -166244472 + MIR SINE MIR 120 186 -76 205 205 0 0 chr5 33385756 33385795 -166244355 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2307 137 27 19 chr5 33386097 33386469 -166243681 - THE1C LTR MaLR 0 375 1 370 188 34 51 chr5 33386660 33386777 -166243373 + Charlie8 DNA MER1_type 77 191 -2226 2249 180 56 16 chr5 33387609 33388054 -166242096 + MLT1C LTR MaLR 1 463 -4 7130 101 6 1 chr5 33388776 33389769 -166240381 - L1MA1 LINE L1 -4 6298 5292 598 220 120 66 chr5 33389960 33390201 -166239949 + MIR SINE MIR 2 255 -7 374 238 26 22 chr5 33390522 33390689 -166239461 - MIR SINE MIR -13 249 54 390 57 0 0 chr5 33390949 33391002 -166239148 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 227 269 0 0 chr5 33391429 33391481 -166238669 - MIR SINE MIR -203 59 8 1856 140 11 0 chr5 33393382 33393646 -166236504 - AluJb SINE Alu -26 286 20 356 269 105 35 chr5 33395017 33395188 -166234962 + MIR SINE MIR 80 262 0 22 56 0 0 chr5 33395763 33395799 -166234351 + AT_rich Low_complexity Low_complexity 1 36 0 1082 241 103 41 chr5 33396230 33396550 -166233600 + MSTD LTR MaLR 1 340 -56 822 154 31 0 chr5 33396558 33396688 -166233462 - FLAM_C SINE Alu -8 135 2 515 83 28 0 chr5 33396692 33396764 -166233386 + MSTD LTR MaLR 323 396 0 258 32 0 0 chr5 33396995 33397026 -166233124 + (TG)n Simple_repeat Simple_repeat 1 31 0 893 151 0 123 chr5 33397635 33397847 -166232303 + MER20 DNA MER1_type 1 186 -33 2512 66 0 25 chr5 33397850 33398169 -166231981 + AluSp SINE Alu 1 311 -2 287 200 18 0 chr5 33398193 33398248 -166231902 + MER20 DNA MER1_type 164 219 0 23 86 0 0 chr5 33398552 33398610 -166231540 + AT_rich Low_complexity Low_complexity 1 58 0 31 26 0 0 chr5 33398862 33398900 -166231250 + AT_rich Low_complexity Low_complexity 1 38 0 1490 132 5 0 chr5 33398907 33399119 -166231031 + AluSx SINE Alu 2 214 -98 387 280 62 43 chr5 33399245 33399456 -166230694 + MIR SINE MIR 8 222 -40 2317 55 3 17 chr5 33399478 33399770 -166230380 + L1PA8 LINE L1 5882 6169 -3 1918 154 33 27 chr5 33399948 33400280 -166229870 + THE1B LTR MaLR 1 334 -30 341 232 42 21 chr5 33401182 33401277 -166228873 - MIR SINE MIR -61 201 105 220 244 188 38 chr5 33401554 33401714 -166228436 - MIR3 SINE MIR -13 195 12 1180 248 150 38 chr5 33402877 33403410 -166226740 + MLT1G LTR MaLR 1 588 -2 337 252 181 0 chr5 33403532 33403659 -166226491 + LTR33 LTR ERVL 1 150 -371 * 395 276 118 54 chr5 33403657 33403860 -166226290 + LTR33 LTR ERVL 304 519 -2 351 0 0 0 chr5 33405251 33405290 -166224860 + (TG)n Simple_repeat Simple_repeat 1 39 0 240 170 57 0 chr5 33405549 33405602 -166224548 + GA-rich Low_complexity Low_complexity 6 61 0 349 197 95 80 chr5 33405864 33406001 -166224149 + MIR SINE MIR 53 191 -71 572 188 97 49 chr5 33457972 33458116 -166172034 - MER31A LTR ERV1 -334 151 1 1585 167 52 0 chr5 33458137 33458407 -166171743 - AluSx SINE Alu -12 300 17 947 242 19 0 chr5 33458602 33458817 -166171333 - MER20 DNA MER1_type 0 219 1 2334 87 3 0 chr5 33458869 33459158 -166170992 - AluSp SINE Alu -18 295 6 1110 127 6 0 chr5 33459902 33460067 -166170083 - AluSg/x SINE Alu 0 310 145 910 161 112 45 chr5 33460180 33460422 -166169728 + Charlie5 DNA MER1_type 2328 2585 -27 202 205 0 0 chr5 33460823 33460862 -166169288 + GA-rich Low_complexity Low_complexity 2 40 0 2458 138 5 35 chr5 33460911 33461340 -166168810 + L1MB3 LINE L1 5759 6174 -9 2638 37 0 0 chr5 33461593 33461893 -166168257 + AluY SINE Alu 1 300 -11 199 373 73 9 chr5 33462830 33462940 -166167210 - L2 LINE L2 -19 3253 3137 2984 79 33 12 chr5 33462941 33463360 -166166790 + LTR10D LTR ERV1 1 428 -85 7504 64 1 0 chr5 33463650 33464687 -166165463 + L1PA7 LINE L1 5099 6154 0 6098 81 24 29 chr5 33464703 33465595 -166164555 + L1PA10 LINE L1 5281 6167 -1 649 343 58 38 chr5 33466222 33466674 -166163476 - L2 LINE L2 -12 3301 2841 213 323 138 8 chr5 33467694 33467824 -166162326 + MIR SINE MIR 2 148 -114 794 74 89 0 chr5 33468287 33468422 -166161728 + LTR10D LTR ERV1 367 513 0 1184 100 0 0 chr5 33469105 33469255 -166160895 + AluSx SINE Alu 4 153 -159 2435 99 0 0 chr5 33469321 33469633 -166160517 + AluSq SINE Alu 1 312 -1 1148 221 50 22 chr5 33469655 33470017 -166160133 + L1MD2 LINE L1 4787 5158 -988 625 197 59 20 chr5 33470040 33470192 -166159958 + L1MB7 LINE L1 6027 6184 0 * 5483 167 65 15 chr5 33470175 33471327 -166158823 + L1MD2 LINE L1 5159 6357 -2 2188 228 26 28 chr5 33473666 33474202 -166155948 - L1MA10 LINE L1 0 6334 5800 1343 148 29 6 chr5 33474204 33474642 -166155508 + LTR54 LTR ERV1 3 510 0 2933 194 50 2 chr5 33474642 33475488 -166154662 - L1MA10 LINE L1 -529 5805 4922 1615 132 92 4 chr5 33475484 33475711 -166154439 - L1PB1 LINE L1 -130 6021 5763 * 321 26 0 0 chr5 33475711 33475749 -166154401 + (TG)n Simple_repeat Simple_repeat 2 39 0 1615 132 92 4 chr5 33475749 33475802 -166154348 - L1PB1 LINE L1 -388 5763 5716 600 191 40 0 chr5 33475795 33475921 -166154229 - L1PB1 LINE L1 -814 5332 5202 * 1411 157 52 41 chr5 33475922 33475971 -166154179 + L1 LINE L1 4309 4356 -1790 2013 121 14 0 chr5 33475971 33476282 -166153868 + AluSx SINE Alu 1 315 0 1411 157 52 41 chr5 33476282 33476575 -166153575 + L1 LINE L1 4356 4656 -1490 3341 95 97 0 chr5 33476658 33477151 -166152999 - L1P LINE L1 -3513 2633 2093 * 6317 97 3 3 chr5 33477150 33478027 -166152123 + L1P LINE L1 3896 4772 -1374 1159 153 0 0 chr5 33478153 33478356 -166151794 + L1MA4 LINE L1 6094 6296 -4 1183 204 13 144 chr5 33479049 33479295 -166150855 + LTR37B LTR ERV1 9 151 -317 1742 197 44 33 chr5 33479295 33479656 -166150494 + MLT1A1 LTR MaLR 1 365 0 1183 204 13 144 chr5 33479656 33479938 -166150212 + LTR37B LTR ERV1 151 468 0 740 246 133 0 chr5 33480629 33480824 -166149326 - MIR SINE MIR -6 256 36 2330 160 6 9 chr5 33481551 33481889 -166148261 + MER1B DNA MER1_type 1 337 0 336 366 22 0 chr5 33482256 33482390 -166147760 - MIR SINE MIR -22 240 104 440 220 46 54 chr5 33482617 33482792 -166147358 + L1MC/D LINE L1 5517 5707 -514 264 30 0 0 chr5 33483561 33483594 -166146556 + (CA)n Simple_repeat Simple_repeat 1 33 0 2291 210 47 67 chr5 33483990 33484632 -166145518 + L1ME3A LINE L1 5506 6134 -36 559 297 54 5 chr5 33485641 33485826 -166144324 - MIR SINE MIR -27 235 42 225 394 14 7 chr5 33486782 33486924 -166143226 + MIR3 SINE MIR 2 144 -64 222 264 75 47 chr5 33487343 33487449 -166142701 + MIR SINE MIR 39 147 -115 1743 225 48 62 chr5 33487629 33487823 -166142327 + MER110 LTR ERV1 1 196 -295 2504 62 0 7 chr5 33487823 33488131 -166142019 - AluY SINE Alu -5 306 1 1743 225 48 62 chr5 33488131 33488434 -166141716 + MER110 LTR ERV1 196 491 0 715 283 11 11 chr5 33489046 33489226 -166140924 + MER5A DNA MER1_type 7 186 -3 389 269 81 42 chr5 33489226 33489385 -166140765 - MIR3 SINE MIR -22 186 14 1653 210 91 20 chr5 33489685 33490090 -166140060 - MER57B LTR ERV1 0 434 1 283 295 80 18 chr5 33490869 33490981 -166139169 + L2 LINE L2 2851 2969 -303 275 212 18 26 chr5 33492173 33492286 -166137864 + (TATATG)n Simple_repeat Simple_repeat 3 114 0 1262 264 20 7 chr5 33492435 33492738 -166137412 - MER93a LTR ERV1 -4 398 92 414 281 135 16 chr5 33493509 33493701 -166136449 + MIR SINE MIR 22 236 -26 1032 158 0 0 chr5 33493771 33493936 -166136214 - AluSg/x SINE Alu -8 304 140 559 246 14 14 chr5 33494529 33494671 -166135479 + MER117 DNA MER1_type 2 143 -54 262 316 21 11 chr5 33494689 33494784 -166135366 + MER117 DNA MER1_type 100 195 -2 390 243 102 83 chr5 33495326 33495759 -166134391 + L1ME4a LINE L1 5624 6064 -57 509 292 124 5 chr5 33495912 33496114 -166134036 + MIR SINE MIR 5 230 -32 307 284 120 33 chr5 33496405 33496588 -166133562 - MIR SINE MIR -51 211 13 423 0 0 0 chr5 33496588 33496635 -166133515 + (CA)n Simple_repeat Simple_repeat 2 48 0 289 215 0 15 chr5 33497706 33497771 -166132379 - MIR SINE MIR -112 150 87 796 186 14 0 chr5 33497807 33497947 -166132203 - MER5A DNA MER1_type -47 142 1 425 155 0 129 chr5 33497955 33498071 -166132079 - MER58 DNA MER1_type 0 2420 2320 499 237 10 0 chr5 33498085 33498182 -166131968 - MER58 DNA MER1_type -242 99 2 2247 111 0 16 chr5 33498636 33498952 -166131198 - AluSx SINE Alu -1 311 1 824 250 20 73 chr5 33499895 33499979 -166130171 - MER46C DNA MER2_type -1 337 250 1289 123 24 24 chr5 33499979 33500190 -166129960 + L1MB2 LINE L1 5960 6170 -1 824 250 20 73 chr5 33500190 33500451 -166129699 - MER46C DNA MER2_type -88 250 1 194 198 119 119 chr5 33500489 33500590 -166129560 - MIR SINE MIR -110 152 52 283 158 13 13 chr5 33501845 33501921 -166128229 + (CA)n Simple_repeat Simple_repeat 1 76 0 192 364 78 0 chr5 33501970 33502047 -166128103 + L3 LINE CR1 1027 1109 -468 240 271 0 0 chr5 33502047 33502095 -166128055 + (TG)n Simple_repeat Simple_repeat 1 48 0 378 254 100 23 chr5 33502635 33502765 -166127385 - MIR3 SINE MIR -54 154 15 329 200 0 0 chr5 33502941 33502996 -166127154 - MER45C DNA AcHobo 0 953 899 * 705 297 102 27 chr5 33502991 33503284 -166126866 - MER45C DNA AcHobo -320 633 319 1131 292 11 8 chr5 33503293 33503660 -166126490 - MER45C DNA AcHobo -585 368 1 1823 179 40 5 chr5 33503777 33504152 -166125998 - MLT1B LTR MaLR 0 390 3 2250 72 0 0 chr5 33504227 33504492 -166125658 - AluSc SINE Alu -21 288 24 297 246 96 36 chr5 33504535 33504702 -166125448 + L2 LINE L2 3081 3257 -56 180 0 0 0 chr5 33504920 33504940 -166125210 + (A)n Simple_repeat Simple_repeat 1 20 0 221 397 0 0 chr5 33505195 33505273 -166124877 - L2 LINE L2 0 3272 3195 234 91 0 0 chr5 33505330 33505363 -166124787 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1084 227 138 37 chr5 33505383 33505811 -166124339 - L2 LINE L2 -34 3279 2809 345 82 0 0 chr5 33506275 33506324 -166123826 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 298 339 67 24 chr5 33506652 33506817 -166123333 - L2 LINE L2 -5 3267 3096 474 360 93 12 chr5 33506857 33507311 -166122839 - L2 LINE L2 -265 3007 2481 1416 194 23 48 chr5 33507397 33507707 -166122443 - AluJo SINE Alu -8 304 3 1216 215 20 81 chr5 33509254 33509663 -166120487 + MLT2C1 LTR ERVL 14 397 0 373 290 122 47 chr5 33509941 33510327 -166119823 + L1ME3 LINE L1 5425 5839 -323 304 315 11 0 chr5 33510484 33510573 -166119577 + L2 LINE L2 3224 3313 0 199 300 27 120 chr5 33511938 33512088 -166118062 + MIR3 SINE MIR 67 202 -6 476 266 191 11 chr5 33514989 33515177 -166114973 + MIR SINE MIR 13 234 -28 381 276 138 0 chr5 33515642 33515794 -166114356 + MIR SINE MIR 78 250 -12 2036 96 0 57 chr5 33517151 33517481 -166112669 + AluSq SINE Alu 1 313 0 415 223 43 36 chr5 33517605 33517744 -166112406 - L1ME3A LINE L1 -102 6068 5929 1116 205 0 0 chr5 33519438 33519643 -166110507 + MER3 DNA MER1_type 1 205 -4 514 288 55 0 chr5 33520311 33520474 -166109676 + MIR SINE MIR 79 250 -12 522 253 159 43 chr5 33520514 33520747 -166109403 + MIR SINE MIR 1 260 -2 419 291 64 25 chr5 33521937 33522133 -166108017 + MIR SINE MIR 16 223 -39 436 290 49 16 chr5 33522539 33522722 -166107428 - MER5A DNA MER1_type 0 189 1 390 42 0 0 chr5 33523470 33523518 -166106632 + (TG)n Simple_repeat Simple_repeat 1 48 0 2247 112 3 13 chr5 33524501 33524815 -166105335 + AluSx SINE Alu 1 311 -1 2424 80 0 0 chr5 33524817 33525128 -166105022 + AluY SINE Alu 1 311 0 2004 183 129 5 chr5 33525709 33526158 -166103992 + MLT1D LTR MaLR 1 505 0 392 209 127 51 chr5 33526244 33526402 -166103748 + MER112 DNA MER1_type 20 189 -71 237 291 139 35 chr5 33526459 33526631 -166103519 + MIR SINE MIR 58 247 -15 978 296 52 19 chr5 33526754 33527119 -166103031 - L3 LINE CR1 -124 1453 1077 403 236 146 26 chr5 33527681 33527990 -166102160 - L1MC4 LINE L1 -1 8041 7696 1383 202 107 3 chr5 33528648 33528984 -166101166 + L1MC3 LINE L1 7065 7435 -350 934 241 14 21 chr5 33528990 33529276 -166100874 + L1MC3 LINE L1 7502 7785 0 669 273 152 29 chr5 33529470 33529950 -166100200 + L1ME4a LINE L1 5581 6119 -2 248 312 7 52 chr5 33530330 33530484 -166099666 + GA-rich Low_complexity Low_complexity 3 149 0 1142 177 83 133 chr5 33531424 33531904 -166098246 + MLT1D LTR MaLR 3 458 -47 304 294 24 48 chr5 33532378 33532504 -166097646 + MIR SINE MIR 82 204 -58 465 180 0 0 chr5 33533369 33533458 -166096692 + CT-rich Low_complexity Low_complexity 2 90 0 428 256 0 0 chr5 33533491 33533577 -166096573 - AluJ/FLAM SINE Alu -224 88 3 354 301 0 65 chr5 33533679 33533802 -166096348 + L2 LINE L2 3193 3307 -6 21 57 0 0 chr5 33534114 33534149 -166096001 + AT_rich Low_complexity Low_complexity 1 35 0 629 166 48 0 chr5 33534170 33534315 -166095835 + L1MB3 LINE L1 6014 6165 -18 1495 164 24 95 chr5 33534409 33534745 -166095405 - AluJo SINE Alu 0 312 1 348 121 0 30 chr5 33536619 33536685 -166093465 - MADE1 DNA Mariner -13 67 4 331 283 47 9 chr5 33536741 33536847 -166093303 - L2 LINE L2 0 3313 3204 184 237 0 0 chr5 33536896 33536934 -166093216 - L2 LINE L2 -220 3052 3015 561 216 68 68 chr5 33537259 33537523 -166092627 + LTR37B LTR ERV1 203 466 -2 517 205 7 93 chr5 33537555 33537706 -166092444 + MER5A DNA MER1_type 52 189 0 1034 209 36 8 chr5 33538107 33538356 -166091794 + L1MA9 LINE L1 1 256 -6774 755 161 109 6 chr5 33538356 33538530 -166091620 + MLT1A1 LTR MaLR 1 192 -173 12789 175 33 15 chr5 33538534 33541773 -166088377 + L1MA9 LINE L1 3316 6634 -638 2390 103 3 0 chr5 33541773 33542074 -166088076 - AluSq SINE Alu -11 302 1 12789 175 33 15 chr5 33542074 33542719 -166087431 + L1MA9 LINE L1 6634 7266 -6 230 283 8 0 chr5 33543750 33543870 -166086280 + (TA)n Simple_repeat Simple_repeat 1 121 0 374 293 173 7 chr5 33543935 33544085 -166086065 - MER5A DNA MER1_type -1 188 14 2299 19 19 0 chr5 33544287 33544555 -166085595 - L1PA3 LINE L1 -3 6152 5880 348 329 39 13 chr5 33544672 33544827 -166085323 + L1MEc LINE L1 1806 1964 -4432 7809 248 56 13 chr5 33544845 33548029 -166082121 + L1MEc LINE L1 2048 5334 -881 258 176 0 0 chr5 33548029 33548080 -166082070 + (TG)n Simple_repeat Simple_repeat 1 51 0 2860 242 52 4 chr5 33548095 33548920 -166081230 + L1MB8 LINE L1 5313 6177 -1 189 219 0 0 chr5 33549021 33549053 -166081097 + MER5B DNA MER1_type 18 49 -129 288 304 49 10 chr5 33550466 33550568 -166079582 - L2 LINE L2 -14 3258 3153 253 171 14 14 chr5 33550985 33551055 -166079095 + GA-rich Low_complexity Low_complexity 5 74 0 612 264 83 47 chr5 33552507 33552860 -166077290 - L1MC5 LINE L1 -184 7777 7403 2416 83 0 13 chr5 33552860 33553173 -166076977 + AluSc SINE Alu 1 309 0 612 264 83 47 chr5 33553173 33553262 -166076888 - L1MC5 LINE L1 -558 7403 7319 285 109 0 0 chr5 33553370 33553416 -166076734 + (TA)n Simple_repeat Simple_repeat 2 47 0 285 289 35 28 chr5 33553456 33553598 -166076552 - L1MC4 LINE L1 -574 7468 7326 368 291 199 7 chr5 33553842 33553993 -166076157 + MIR3 SINE MIR 13 192 -16 2156 127 7 0 chr5 33554583 33554883 -166075267 - AluSx SINE Alu -10 302 1 429 272 53 18 chr5 33555350 33555464 -166074686 - MER91A DNA MER1_type -70 126 9 1898 264 67 10 chr5 33556272 33556964 -166073186 - L1PBa LINE L1 -6052 811 81 25 31 0 0 chr5 33557542 33557574 -166072576 + AT_rich Low_complexity Low_complexity 1 32 0 344 340 37 6 chr5 33559118 33559280 -166070870 + MLT1I LTR MaLR 40 206 -203 2012 153 66 34 chr5 33560803 33561022 -166069128 - MLT1B LTR MaLR 0 390 153 2330 105 3 0 chr5 33561022 33561326 -166068824 - AluSx SINE Alu -6 306 2 2012 153 66 34 chr5 33561326 33561484 -166068666 - MLT1B LTR MaLR -237 153 1 188 285 66 73 chr5 33562132 33562283 -166067867 + MIR SINE MIR 102 251 -11 391 253 11 0 chr5 33563323 33563410 -166066740 - MER63 DNA MER1_type 0 1060 973 1736 204 101 27 chr5 33563426 33563872 -166066278 + MLT1D LTR MaLR 27 505 0 604 134 52 0 chr5 33563872 33563967 -166066183 - MER63 DNA MER1_type -84 752 27 201 226 0 0 chr5 33564021 33564074 -166066076 + (ATATG)n Simple_repeat Simple_repeat 1 53 0 245 292 97 0 chr5 33564216 33564288 -166065862 - L2 LINE L2 0 3272 3194 2320 155 14 11 chr5 33564478 33564840 -166065310 + MLT1A1 LTR MaLR 1 363 -2 284 310 50 0 chr5 33565478 33565578 -166064572 - L2 LINE L2 0 3272 3168 2647 101 28 8 chr5 33566181 33566538 -166063612 - THE1B LTR MaLR 0 364 1 430 331 21 7 chr5 33566563 33566705 -166063445 + MIR SINE MIR 60 203 -59 336 227 39 70 chr5 33567021 33567149 -166063001 + MLT1H LTR MaLR 396 519 -30 25 31 0 0 chr5 33567849 33567881 -166062269 + AT_rich Low_complexity Low_complexity 1 32 0 970 179 12 30 chr5 33568331 33568499 -166061651 + FRAM SINE Alu 1 165 -1 22 35 0 0 chr5 33568661 33568690 -166061460 + AT_rich Low_complexity Low_complexity 1 29 0 487 331 105 26 chr5 33569386 33569806 -166060344 + L2 LINE L2 2510 2962 -352 282 254 0 0 chr5 33569812 33569871 -166060279 - MIR SINE MIR -64 144 86 771 278 31 18 chr5 33569931 33570154 -166059996 + MIR SINE MIR 23 248 -14 185 244 0 0 chr5 33570122 33570163 -166059987 + L2 LINE L2 3262 3302 -11 * 770 190 40 35 chr5 33570875 33571049 -166059101 + MER5B DNA MER1_type 1 175 -3 465 224 41 41 chr5 33571172 33571342 -166058808 - MER112 DNA MER1_type -90 170 1 364 317 34 14 chr5 33571342 33571497 -166058653 - MIR3 SINE MIR -48 160 1 497 197 180 0 chr5 33571731 33571885 -166058265 - MER5A DNA MER1_type 0 189 4 346 253 142 12 chr5 33572044 33572206 -166057944 - L1MEc LINE L1 -4925 1471 1289 362 241 190 55 chr5 33572208 33572445 -166057705 - L2 LINE L2 -101 3212 2944 1386 273 92 34 chr5 33573839 33574588 -166055562 - L2 LINE L2 -100 3213 2404 1704 173 3 14 chr5 33574588 33574877 -166055273 + AluJo SINE Alu 6 291 -21 1386 273 92 34 chr5 33574877 33574953 -166055197 - L2 LINE L2 -909 2404 2334 1711 268 24 16 chr5 33574968 33575468 -166054682 - L1ME3A LINE L1 -28 6142 5639 238 280 13 27 chr5 33575498 33575573 -166054577 + MLT1G1 LTR MaLR 248 321 -274 352 238 0 0 chr5 33575573 33575653 -166054497 + L1ME3A LINE L1 5881 5960 -210 670 227 39 84 chr5 33575711 33575997 -166054153 - L1ME3A LINE L1 -580 5584 5312 1420 248 109 80 chr5 33576002 33576540 -166053610 + MLT1G1 LTR MaLR 1 593 -2 1026 276 105 26 chr5 33576547 33577015 -166053135 - L1ME3A LINE L1 -840 5306 4802 1247 266 126 65 chr5 33577015 33577707 -166052443 - L2 LINE L2 -965 2349 1616 1314 223 33 50 chr5 33577807 33578171 -166051979 + MLT1A2 LTR MaLR 1 358 -16 1311 153 27 110 chr5 33578778 33579151 -166050999 - L1MA7 LINE L1 -22 6269 5928 1147 186 30 60 chr5 33580052 33580385 -166049765 - L1MC5 LINE L1 -30 7931 7609 255 229 0 14 chr5 33580416 33580486 -166049664 - L1MC/D LINE L1 -1911 5897 5829 4014 190 48 33 chr5 33580573 33582277 -166047873 - L1MA9 LINE L1 -30 6282 4547 396 331 41 0 chr5 33582633 33582754 -166047396 + MIR3 SINE MIR 66 191 -17 3252 96 20 0 chr5 33583271 33583709 -166046441 + L1PA13 LINE L1 5710 6156 -7 484 291 114 41 chr5 33583785 33584225 -166045925 - L1ME4a LINE L1 -171 5950 5479 363 248 203 33 chr5 33584922 33585075 -166045075 + MIR3 SINE MIR 15 193 -15 26 0 0 0 chr5 33585305 33585331 -166044819 + AT_rich Low_complexity Low_complexity 1 26 0 1854 162 6 16 chr5 33585384 33585699 -166044451 + AluJo SINE Alu 1 312 0 301 148 19 0 chr5 33585802 33585856 -166044294 - Charlie8 DNA MER1_type -1003 1414 1360 327 237 65 36 chr5 33585862 33586001 -166044149 - Charlie8 DNA MER1_type -1897 520 378 641 165 23 38 chr5 33586487 33586620 -166043530 + L1MA9 LINE L1 6182 6312 0 577 251 186 65 chr5 33587290 33587676 -166042474 + MLT1J2 LTR MaLR 1 433 -17 24 53 0 0 chr5 33588931 33588969 -166041181 + AT_rich Low_complexity Low_complexity 1 38 0 216 200 0 0 chr5 33589023 33589073 -166041077 + (TATG)n Simple_repeat Simple_repeat 1 50 0 311 285 62 62 chr5 33589073 33589217 -166040933 + L1MC4 LINE L1 6595 6738 -1304 410 215 30 22 chr5 33590009 33590110 -166040040 + MIR SINE MIR 93 189 -65 1048 209 52 14 chr5 33590123 33590334 -166039816 + MER58A DNA MER1_type 6 224 0 2046 228 82 37 chr5 33591579 33592175 -166037975 + MLT1E3 LTR MaLR 1 623 -1 405 0 0 0 chr5 33592311 33592356 -166037794 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 687 305 109 28 chr5 33592460 33593013 -166037137 - L1ME LINE L1 -314 5856 5254 378 311 55 19 chr5 33593054 33593311 -166036839 - L1ME LINE L1 -978 5168 4903 1799 162 0 11 chr5 33595098 33595382 -166034768 + AluJo SINE Alu 1 281 -31 670 261 72 9 chr5 33595760 33595982 -166034168 - MIR SINE MIR -26 236 1 225 232 42 74 chr5 33596837 33596932 -166033218 + MIR SINE MIR 60 151 -57 558 251 162 22 chr5 33598308 33598496 -166031654 + L1ME4a LINE L1 5761 5921 -200 2009 132 53 71 chr5 33598496 33598890 -166031260 - MLT1B LTR MaLR -3 387 1 558 251 162 22 chr5 33598890 33599016 -166031134 + L1ME4a LINE L1 5921 6119 -2 431 259 193 0 chr5 33599621 33599809 -166030341 - MIR SINE MIR -21 241 20 200 180 180 33 chr5 33599804 33599865 -166030285 + L2 LINE L2 3144 3213 -59 * 293 317 32 32 chr5 33599967 33600002 -166030148 - MIR SINE MIR -76 186 152 2339 168 6 3 chr5 33600002 33600366 -166029784 - MLT1A1 LTR MaLR 0 365 1 293 317 32 32 chr5 33600366 33600453 -166029697 - MIR SINE MIR -109 153 64 279 0 0 0 chr5 33600508 33600539 -166029611 + (TC)n Simple_repeat Simple_repeat 2 32 0 201 300 98 71 chr5 33601297 33601489 -166028661 - L2 LINE L2 -337 2977 2771 867 173 0 0 chr5 33601489 33601622 -166028528 - FLAM_C SINE Alu 0 133 1 201 300 98 71 chr5 33601622 33601766 -166028384 - L2 LINE L2 -543 2771 2632 367 93 0 0 chr5 33601814 33601868 -166028282 + MADE1 DNA Mariner 27 80 0 2138 133 3 0 chr5 33602976 33603276 -166026874 + AluSx SINE Alu 1 301 -11 255 261 8 50 chr5 33603287 33603406 -166026744 + GA-rich Low_complexity Low_complexity 5 118 0 316 310 0 0 chr5 33603746 33603846 -166026304 + MIR SINE MIR 82 181 -81 601 270 50 5 chr5 33604973 33605195 -166024955 + MIR SINE MIR 6 237 -25 924 70 78 0 chr5 33606121 33606250 -166023900 - MER85 DNA T2_type 0 139 1 339 281 86 16 chr5 33608107 33608235 -166021915 + L1MD3 LINE L1 6444 6580 -1415 586 206 0 0 chr5 33608236 33608333 -166021817 - Tigger7 DNA MER2_type 0 2487 2391 964 184 163 34 chr5 33608334 33608473 -166021677 - Tigger7 DNA MER2_type -468 265 145 7960 77 21 9 chr5 33608473 33609532 -166020618 + MER11C LTR ERVK 1 1071 0 964 184 163 34 chr5 33609532 33609625 -166020525 - Tigger7 DNA MER2_type -588 145 3 1406 206 48 93 chr5 33609628 33610152 -166019998 + L1MC4 LINE L1 6590 7089 -953 872 240 31 9 chr5 33610157 33610382 -166019768 + L1MC4a LINE L1 7163 7392 -416 1035 179 113 69 chr5 33610393 33610667 -166019483 - MSTB1 LTR MaLR -146 286 1 857 179 7 0 chr5 33610669 33610820 -166019330 + L1MC4 LINE L1 7475 7626 -416 2503 83 0 0 chr5 33611917 33612229 -166017921 + AluSp SINE Alu 1 312 -1 2077 134 0 10 chr5 33612509 33612807 -166017343 + AluSx SINE Alu 1 295 -17 2648 91 0 0 chr5 33662990 33663343 -165966807 + L1PA7 LINE L1 4719 5071 -1075 7115 55 6 8 chr5 33663343 33664214 -165965936 + L1PA7 LINE L1 5283 6154 0 8425 169 22 14 chr5 33664217 33666832 -165963318 + L1PB3 LINE L1 3521 6152 -2 224 29 0 29 chr5 33666833 33666867 -165963283 + (CA)n Simple_repeat Simple_repeat 2 34 0 227 266 9 18 chr5 33666900 33667009 -165963141 - L1M4 LINE L1 -3476 2670 2563 2278 137 134 11 chr5 33667034 33667415 -165962735 + MSTA LTR MaLR 1 428 0 5976 180 23 28 chr5 33667415 33667908 -165962242 + MSTA-int LTR MaLR 1 495 -1156 1162 146 151 0 chr5 33667908 33668107 -165962043 - MER30 DNA MER1_type 0 230 2 5976 180 23 28 chr5 33668107 33668723 -165961427 + MSTA-int LTR MaLR 495 1105 -546 5522 115 44 26 chr5 33668723 33669724 -165960426 - MER11B LTR ERVK -88 1148 1 659 140 9 9 chr5 33669732 33669846 -165960304 + MSTA-int LTR MaLR 1538 1651 0 2309 154 115 5 chr5 33669846 33670230 -165959920 + MSTA LTR MaLR 1 426 -2 1914 214 21 32 chr5 33670256 33670783 -165959367 + L1M4 LINE L1 3333 3853 -2293 4848 234 37 49 chr5 33670794 33671028 -165959122 + L1MC1 LINE L1 3077 3312 -3021 285 196 0 0 chr5 33671028 33671079 -165959071 + MSTA LTR MaLR 371 421 -7 4848 234 37 49 chr5 33671079 33671481 -165958669 + L1MC1 LINE L1 3312 3717 -2616 2401 96 0 10 chr5 33671481 33671794 -165958356 + AluSg SINE Alu 1 310 0 4848 234 37 49 chr5 33671794 33674045 -165956105 + L1MC1 LINE L1 3717 5846 -487 2003 129 0 0 chr5 33674052 33674323 -165955827 + AluSc SINE Alu 1 271 -38 2607 150 33 7 chr5 33674423 33674849 -165955301 + L1MC1 LINE L1 5897 6333 0 3763 219 61 58 chr5 33674849 33676029 -165954121 + L1M4 LINE L1 3843 5025 -1121 1290 185 20 16 chr5 33676034 33676283 -165953867 + L1MD1 LINE L1 5993 6242 0 243 150 62 113 chr5 33677937 33678017 -165952133 - MER5B DNA MER1_type 0 178 103 622 269 0 28 chr5 33678040 33678222 -165951928 + MER5B DNA MER1_type 1 177 -1 540 227 0 133 chr5 33678231 33678292 -165951858 - MER5A DNA MER1_type 0 189 122 1165 191 30 4 chr5 33678292 33678522 -165951628 + L1MB8 LINE L1 5933 6168 -10 540 227 0 133 chr5 33678522 33678663 -165951487 - MER5A DNA MER1_type -67 122 14 989 245 19 5 chr5 33679694 33679910 -165950240 - MER58A DNA MER1_type -5 219 1 474 193 12 0 chr5 33679910 33679993 -165950157 - MIR SINE MIR -91 171 88 2006 127 0 36 chr5 33680956 33681264 -165948886 - AluSp SINE Alu -16 297 1 1957 103 4 8 chr5 33681951 33682244 -165947906 - AluSp SINE Alu 0 313 38 240 143 0 0 chr5 33682686 33682742 -165947408 + (T)n Simple_repeat Simple_repeat 1 56 0 789 103 0 0 chr5 33684779 33684886 -165945264 + AluY SINE Alu 205 311 0 419 256 108 0 chr5 33685679 33685808 -165944342 - MIR SINE MIR 0 262 120 405 308 7 20 chr5 33686202 33686348 -165943802 + MIR SINE MIR 119 262 0 1991 110 38 10 chr5 33687141 33687431 -165942719 - AluSx SINE Alu -14 298 1 767 90 0 0 chr5 33687449 33687549 -165942601 - U6 snRNA snRNA -6 101 2 193 269 51 39 chr5 33688374 33688452 -165941698 - L3 LINE CR1 -15 1562 1484 833 177 0 15 chr5 33688555 33688685 -165941465 + FLAM_C SINE Alu 2 129 -14 2120 123 3 0 chr5 33689059 33689352 -165940798 + AluSx SINE Alu 1 294 -18 255 189 0 0 chr5 33690070 33690123 -165940027 + (TG)n Simple_repeat Simple_repeat 2 54 0 309 288 147 40 chr5 33690135 33690312 -165939838 + MIR SINE MIR 5 200 -62 1713 191 84 31 chr5 33692568 33692986 -165937164 - MLT1D LTR MaLR -5 500 61 363 228 52 7 chr5 33693143 33693279 -165936871 + CT-rich Low_complexity Low_complexity 3 144 0 312 319 98 34 chr5 33693396 33693662 -165936488 + L2 LINE L2 689 971 -2343 734 294 20 0 chr5 33694199 33694400 -165935750 - MIR SINE MIR 0 262 58 2439 264 124 25 chr5 33695610 33696792 -165933358 - L2 LINE L2 -4 3309 2004 1564 161 29 127 chr5 33697303 33697689 -165932461 - Tigger3(Golem) DNA MER2_type 0 3029 1 1033 250 66 28 chr5 33697721 33698113 -165932037 - L1ME1 LINE L1 -5 6161 5755 1818 170 0 20 chr5 33698320 33698620 -165931530 + AluJo SINE Alu 1 294 -18 1670 179 24 14 chr5 33700026 33700323 -165929827 + AluJb SINE Alu 1 300 -12 907 153 0 15 chr5 33700342 33700479 -165929671 + AluJo SINE Alu 1 135 -177 4092 256 55 47 chr5 33700686 33702319 -165927831 + L1ME2 LINE L1 36 1681 -4715 4466 198 100 8 chr5 33702347 33703541 -165926609 - L1PBa LINE L1 -5410 1453 6 605 251 29 6 chr5 33703546 33703717 -165926433 + L1ME2 LINE L1 4899 5073 -1142 2206 129 0 0 chr5 33703718 33704020 -165926130 + AluSq SINE Alu 1 302 -11 2639 198 34 17 chr5 33704192 33704302 -165925848 + L1ME2 LINE L1 5162 5269 -966 2331 121 0 0 chr5 33704302 33704609 -165925541 + AluSg SINE Alu 1 307 -3 195 42 0 0 chr5 33704609 33704633 -165925517 + (GGGGA)n Simple_repeat Simple_repeat 5 28 0 2639 198 34 17 chr5 33704633 33705249 -165924901 + L1ME2 LINE L1 5268 5895 -340 4310 82 29 42 chr5 33705249 33706291 -165923859 + MER11A LTR ERVK 1 1266 0 400 219 79 112 chr5 33706295 33706510 -165923640 + L1ME2 LINE L1 5903 6110 -123 691 125 0 0 chr5 33706790 33706894 -165923256 - L1M2 LINE L1 -866 5434 5331 3660 159 16 22 chr5 33706895 33707580 -165922570 + L1MA8 LINE L1 5609 6289 -2 453 305 20 13 chr5 33707922 33708073 -165922077 + MER5B DNA MER1_type 1 152 -26 939 182 39 0 chr5 33708375 33708556 -165921594 - MER5A DNA MER1_type 0 189 2 1543 266 23 10 chr5 33710112 33710597 -165919553 - L1M4 LINE L1 -3000 3146 2656 238 195 171 12 chr5 33710788 33710870 -165919280 + MLT1F1 LTR MaLR 1 95 -559 1133 257 169 38 chr5 33710881 33711325 -165918825 + MLT1F1 LTR MaLR 66 567 0 279 348 66 23 chr5 33711334 33711667 -165918483 - L2 LINE L2 -743 2571 2163 220 298 48 0 chr5 33711601 33711685 -165918465 + MIR SINE MIR 134 221 -41 * 1225 235 35 65 chr5 33711701 33711949 -165918201 + MLT1B LTR MaLR 1 234 -156 2630 153 19 0 chr5 33711949 33712367 -165917783 - MSTB LTR MaLR 0 426 1 1225 235 35 65 chr5 33712367 33712518 -165917632 + MLT1B LTR MaLR 234 388 -2 4310 100 5 8 chr5 33713192 33713810 -165916340 - L1PB1 LINE L1 0 6151 5536 458 228 14 35 chr5 33713844 33713989 -165916161 - L1 LINE L1 -2593 4269 4128 3299 149 33 4 chr5 33714091 33714912 -165915238 - L1PA7 LINE L1 -271 5883 2986 2524 125 11 3 chr5 33714913 33715274 -165914876 + THE1B LTR MaLR 1 364 0 2036 77 4 7 chr5 33715274 33715547 -165914603 + THE1B-int LTR MaLR 1 272 -1308 2211 68 0 0 chr5 33715559 33715838 -165914312 + THE1B-int LTR MaLR 1302 1580 0 2597 100 14 8 chr5 33715840 33716200 -165913950 + THE1B LTR MaLR 3 364 0 16010 130 47 46 chr5 33716200 33719900 -165910250 - L1PBa LINE L1 -3157 3705 1 257 35 0 0 chr5 33720847 33720876 -165909274 + U2 snRNA snRNA 5 33 -155 639 333 87 30 chr5 33721290 33721740 -165908410 + L2 LINE L2 2248 2734 -580 1372 284 30 40 chr5 33721740 33722236 -165907914 - LTR16C LTR ERVL 0 491 1 639 333 87 30 chr5 33722236 33722314 -165907836 + L2 LINE L2 2734 2806 -508 799 294 8 32 chr5 33722519 33722767 -165907383 - MLT2F LTR ERVL -234 429 188 4323 287 59 24 chr5 33722807 33724357 -165905793 - ERVL LTR ERVL -3385 2379 775 859 276 105 20 chr5 33724364 33724803 -165905347 + HAL1 LINE L1 1933 2408 -99 279 256 60 17 chr5 33724815 33724932 -165905218 - MER5B DNA MER1_type -37 141 20 21 0 0 0 chr5 33724966 33724987 -165905163 + AT_rich Low_complexity Low_complexity 1 21 0 2283 112 3 3 chr5 33725358 33725670 -165904480 - AluSx SINE Alu 0 312 1 215 320 83 51 chr5 33725679 33725835 -165904315 - L2 LINE L2 -210 3062 2902 2191 100 0 0 chr5 33725921 33726254 -165903896 + AluSg SINE Alu 1 333 0 2105 116 3 7 chr5 33726548 33726842 -165903308 + AluSc SINE Alu 1 293 -16 3226 173 18 71 chr5 33727016 33727746 -165902404 - LTR8 LTR ERV1 0 691 1 335 316 30 42 chr5 33727977 33728145 -165902005 - MER5A DNA MER1_type 0 189 24 226 200 0 0 chr5 33728172 33728212 -165901938 - MIR SINE MIR -56 152 113 4905 73 26 3 chr5 33728217 33728862 -165901288 - PABL_A LTR ERV1 0 660 1 849 159 49 102 chr5 33729640 33729866 -165900284 + MER20 DNA MER1_type 1 214 -5 263 247 71 91 chr5 33730182 33730336 -165899814 + L2 LINE L2 1873 2023 -1291 506 156 89 0 chr5 33730338 33730428 -165899722 + MER4A LTR ERV1 1 98 -566 1827 117 11 80 chr5 33730428 33730802 -165899348 + MER4A LTR ERV1 261 664 0 675 326 138 26 chr5 33730961 33731703 -165898447 + L2 LINE L2 2153 2977 -337 2032 158 0 0 chr5 33732015 33732313 -165897837 - AluSx SINE Alu -14 298 1 208 321 0 0 chr5 33732367 33732420 -165897730 + L2 LINE L2 3196 3248 -24 898 250 10 0 chr5 33732500 33732700 -165897450 - MLT1D LTR MaLR -5 500 299 399 190 30 80 chr5 33732696 33732796 -165897354 - MLT1D LTR MaLR -409 96 2 * 183 366 141 0 chr5 33732861 33733003 -165897147 + MIR3 SINE MIR 19 180 -28 810 108 7 20 chr5 33734147 33734295 -165895855 + (TTTC)n Simple_repeat Simple_repeat 3 148 0 22 35 0 0 chr5 33737229 33737258 -165892892 + GC_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr5 33738436 33738461 -165891689 + AT_rich Low_complexity Low_complexity 1 25 0 262 332 62 62 chr5 33739863 33740107 -165890043 - L2 LINE L2 -10 3262 3019 180 0 0 0 chr5 33740490 33740510 -165889640 + (TG)n Simple_repeat Simple_repeat 1 20 0 777 306 74 46 chr5 33741583 33742018 -165888132 + MER115 DNA AcHobo 4 450 -243 540 250 172 16 chr5 33742075 33742267 -165887883 + MIR SINE MIR 35 256 -6 1703 187 0 10 chr5 33742287 33742581 -165887569 - AluJb SINE Alu -18 294 4 296 271 187 13 chr5 33742599 33742754 -165887396 - MIR SINE MIR -75 187 6 200 221 94 102 chr5 33742759 33742886 -165887264 + L3 LINE CR1 1155 1280 -297 2367 97 0 0 chr5 33743385 33743683 -165886467 + AluY SINE Alu 1 298 -13 734 214 91 16 chr5 33744121 33744308 -165885842 - MER58B DNA MER1_type -4 337 137 716 169 14 14 chr5 33744334 33744476 -165885674 - MER58B DNA MER1_type -163 178 37 247 284 135 34 chr5 33744818 33744966 -165885184 - MIR SINE MIR 0 262 100 304 270 143 36 chr5 33744966 33745162 -165884988 + L1MC4a LINE L1 5851 6067 -1741 242 258 0 2 chr5 33745248 33745317 -165884833 - MIR SINE MIR -102 106 40 182 313 45 0 chr5 33746042 33746109 -165884041 + MIR SINE MIR 82 151 -111 180 0 0 0 chr5 33746166 33746186 -165883964 + (GGCTG)n Simple_repeat Simple_repeat 5 24 0 425 295 26 47 chr5 33747170 33747363 -165882787 + MIR SINE MIR 60 248 -14 291 278 21 62 chr5 33748552 33748696 -165881454 - L2 LINE L2 -236 3036 2899 1634 184 23 29 chr5 33749095 33749404 -165880746 + AluJo SINE Alu 1 307 -5 180 246 49 16 chr5 33749446 33749507 -165880643 + MIR3 SINE MIR 141 203 -5 298 270 34 11 chr5 33750307 33750396 -165879754 - L3 LINE CR1 -810 767 677 215 287 58 11 chr5 33751210 33751297 -165878853 + L2 LINE L2 2945 3035 -237 698 221 13 19 chr5 33751321 33751479 -165878671 - FRAM SINE Alu -19 157 1 7437 8 0 1 chr5 33751882 33752703 -165877447 - L1HS LINE L1 0 6155 5336 5257 32 0 0 chr5 33752702 33753326 -165876824 + L1P LINE L1 1941 2564 -3582 * 2418 184 68 55 chr5 33754097 33754689 -165875461 + MLT1E2 LTR MaLR 28 626 0 273 29 0 0 chr5 33754832 33754866 -165875284 + (CA)n Simple_repeat Simple_repeat 2 35 0 8869 121 8 5 chr5 33754866 33756158 -165873992 + HSMAR2 DNA Mariner 6 1301 -1 797 253 0 0 chr5 33757695 33757865 -165872285 - FRAM SINE Alu -1 175 6 322 279 241 19 chr5 33758264 33758526 -165871624 - L1ME4a LINE L1 -28 6093 5774 296 65 152 0 chr5 33759244 33759290 -165870860 + L1MC3 LINE L1 7519 7571 -214 * 1143 110 58 0 chr5 33759288 33759461 -165870689 - L1P5 LINE L1 -507 5644 5462 753 141 16 0 chr5 33759475 33759596 -165870554 - L1PB1 LINE L1 -360 5791 5669 748 92 5 118 chr5 33759588 33759783 -165870367 + L1PB1 LINE L1 5784 5956 -195 * 801 165 24 58 chr5 33760069 33760275 -165869875 + L1MD3 LINE L1 7765 7963 -32 207 286 143 0 chr5 33760329 33760427 -165869723 + L2 LINE L2 3201 3312 -1 260 322 98 53 chr5 33760797 33760969 -165869181 + L2 LINE L2 2935 3098 -174 1573 254 18 78 chr5 33760969 33761458 -165868692 + LTR16B LTR ERVL 5 464 0 260 322 98 53 chr5 33761458 33761644 -165868506 + L2 LINE L2 3098 3270 -2 272 256 206 38 chr5 33761893 33762053 -165868097 - MIR SINE MIR -24 238 52 898 226 51 0 chr5 33762253 33762448 -165867702 + MER3 DNA MER1_type 1 205 -4 392 239 263 34 chr5 33763448 33763653 -165866497 + MIR SINE MIR 2 253 -9 385 174 20 92 chr5 33765117 33765215 -165864935 - MER20 DNA MER1_type -128 91 1 1549 12 0 0 chr5 33765725 33765894 -165864256 - AluYb8 SINE Alu -4 314 146 518 261 150 7 chr5 33766658 33766811 -165863339 - MER5A DNA MER1_type -6 183 9 297 0 0 0 chr5 33767083 33767116 -165863034 + (CA)n Simple_repeat Simple_repeat 2 34 0 198 0 0 0 chr5 33768332 33768354 -165861796 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 360 0 0 0 chr5 33768353 33768393 -165861757 + (TG)n Simple_repeat Simple_repeat 1 40 0 415 284 18 0 chr5 33768406 33768515 -165861635 - L2 LINE L2 0 3313 3203 35 0 0 0 chr5 33768571 33768606 -165861544 + AT_rich Low_complexity Low_complexity 1 35 0 309 333 37 0 chr5 33769711 33769819 -165860331 + LTR16C LTR ERVL 376 487 -4 399 113 0 0 chr5 33769835 33769897 -165860253 + (TTGG)n Simple_repeat Simple_repeat 2 63 0 370 266 9 37 chr5 33769902 33770011 -165860139 + MIR3 SINE MIR 61 166 -42 * 433 291 34 27 chr5 33770002 33770150 -165860000 - L2 LINE L2 -4 3309 3161 1346 150 89 112 chr5 33770732 33770928 -165859222 - AluJb SINE Alu -5 307 119 2166 128 3 0 chr5 33770928 33771225 -165858925 - AluSx SINE Alu -12 300 3 1346 150 89 112 chr5 33771225 33771342 -165858808 - AluJb SINE Alu -193 119 1 228 311 0 0 chr5 33774948 33775009 -165855141 + MLT1L LTR MaLR 19 79 -536 271 339 63 24 chr5 33775065 33775192 -165854958 + MLT1L LTR MaLR 198 329 -286 280 189 84 42 chr5 33775360 33775455 -165854695 + MLT1J LTR MaLR 405 503 -8 1533 208 53 45 chr5 33776230 33776610 -165853540 + MLT1B LTR MaLR 3 385 -5 296 264 57 28 chr5 33776937 33777043 -165853107 - L2 LINE L2 -1 3312 3204 300 365 33 40 chr5 33777064 33777320 -165852830 - L2 LINE L2 -439 2875 2620 5660 129 48 9 chr5 33777320 33778189 -165851961 + MER4D LTR ERV1 1 903 0 300 365 33 40 chr5 33778189 33778236 -165851914 - L2 LINE L2 -694 2620 2574 5236 142 69 9 chr5 33778330 33779182 -165850968 - MER4D LTR ERV1 0 903 1 242 206 136 141 chr5 33779446 33779525 -165850625 + MIR SINE MIR 52 130 -132 824 252 19 19 chr5 33779525 33779735 -165850415 + MER63A DNA MER1_type 1 210 0 242 206 136 141 chr5 33779735 33779839 -165850311 + MIR SINE MIR 130 234 -28 713 267 35 110 chr5 33779876 33780396 -165849754 - L2 LINE L2 -16 3297 2817 467 258 13 63 chr5 33781083 33781242 -165848908 + MER5A DNA MER1_type 39 189 0 1059 168 56 22 chr5 33781883 33782115 -165848035 + L1MB7 LINE L1 5929 6168 -16 685 207 43 37 chr5 33782267 33782455 -165847695 - MER5A DNA MER1_type 0 189 1 231 259 94 12 chr5 33782493 33782578 -165847572 - L1ME LINE L1 -297 5824 5733 472 306 59 11 chr5 33785606 33785792 -165844358 + L2 LINE L2 3115 3309 -4 641 250 83 36 chr5 33785829 33786021 -165844129 + LTR33A LTR ERVL 1 201 -322 617 222 98 15 chr5 33786055 33786258 -165843892 + LTR33A LTR ERVL 292 511 -12 1353 178 8 23 chr5 33786312 33786571 -165843579 - AluJo SINE Alu -12 300 46 232 356 35 23 chr5 33786604 33786691 -165843459 + MIR SINE MIR 13 100 -162 2366 212 46 22 chr5 33786706 33787254 -165842896 + MER119 DNA MER1_type 7 567 -16 201 237 0 0 chr5 33787255 33787293 -165842857 + MIR SINE MIR 109 146 -62 235 326 53 0 chr5 33787504 33787599 -165842551 + MLT1L LTR MaLR 166 265 -350 23 33 0 0 chr5 33789172 33789202 -165840948 + AT_rich Low_complexity Low_complexity 1 30 0 666 147 18 9 chr5 33789320 33789429 -165840721 + FLAM_A SINE Alu 1 110 -32 245 29 29 0 chr5 33789432 33789466 -165840684 + (TCCA)n Simple_repeat Simple_repeat 4 38 0 813 100 0 0 chr5 33791021 33791163 -165838987 - AluY SINE Alu 0 316 175 2109 92 0 7 chr5 33791167 33791476 -165838674 - AluSg SINE Alu 0 307 1 333 306 28 39 chr5 33791482 33791662 -165838488 + L1MC4a LINE L1 5707 5884 -1924 44 0 0 0 chr5 33791662 33791706 -165838444 + AT_rich Low_complexity Low_complexity 1 44 0 1867 156 0 7 chr5 33791724 33792019 -165838131 + AluJb SINE Alu 2 294 -18 3932 164 21 26 chr5 33792188 33792906 -165837244 - L1MB3 LINE L1 -2 6181 5468 2078 97 0 4 chr5 33792912 33793181 -165836969 + AluSx SINE Alu 1 268 -44 2133 106 7 0 chr5 33793490 33793774 -165836376 - AluSx SINE Alu -26 286 1 4506 152 22 27 chr5 33794245 33794982 -165835168 + MER44D DNA MER2_type 1 605 0 3469 183 139 61 chr5 33795029 33795800 -165834350 + L1M4 LINE L1 14 876 -5666 1740 171 3 37 chr5 33795800 33796121 -165834029 + AluJo SINE Alu 1 310 -2 3469 183 139 61 chr5 33796121 33796315 -165833835 + L1M4 LINE L1 876 1054 -5488 228 219 55 82 chr5 33796838 33796911 -165833239 + L1PBa LINE L1 1339 1409 -5454 362 188 78 5 chr5 33798399 33798506 -165831644 + L1MC5 LINE L1 7813 8042 0 207 204 0 0 chr5 33799227 33799271 -165830879 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 1154 123 25 0 chr5 33799818 33799981 -165830169 - AluSg/x SINE Alu -18 294 128 2265 140 31 58 chr5 33800512 33800926 -165829224 - MER57A LTR ERV1 0 403 1 252 136 45 0 chr5 33800982 33801026 -165829124 + LTR65 LTR ERV1 344 389 -280 2091 122 3 3 chr5 33801317 33801611 -165828539 - AluSx SINE Alu -18 294 1 209 246 237 37 chr5 33802303 33802652 -165827498 + L2 LINE L2 1876 2369 -945 1055 189 56 36 chr5 33802666 33802915 -165827235 - MIR SINE MIR -1 261 8 242 346 149 14 chr5 33802950 33803158 -165826992 + L2 LINE L2 2440 2675 -639 238 235 147 0 chr5 33803214 33803282 -165826868 + MIR SINE MIR 63 140 -122 279 57 0 0 chr5 33803598 33803633 -165826517 - MADE1 DNA Mariner -45 35 1 189 152 0 0 chr5 33806055 33806088 -165824062 + MIR SINE MIR 174 206 -56 182 208 83 0 chr5 33806109 33806157 -165823993 - L2 LINE L2 0 3272 3221 198 308 202 43 chr5 33806162 33806558 -165823592 - L2 LINE L2 -601 2713 2255 374 262 119 122 chr5 33807077 33807546 -165822604 + L1M2 LINE L1 677 1144 -5705 3811 139 26 3 chr5 33808360 33809376 -165820774 + L1MA4A LINE L1 4616 5656 -644 2765 52 0 39 chr5 33809376 33809758 -165820392 - MER11A LTR ERVK 0 1266 900 3586 139 62 21 chr5 33809758 33810208 -165819942 + L1MA4A LINE L1 5657 6141 -162 1404 205 10 44 chr5 33810208 33810343 -165819807 + AluJo SINE Alu 1 139 -186 1530 102 0 0 chr5 33810343 33810539 -165819611 + AluSg/x SINE Alu 100 295 -17 1404 205 10 44 chr5 33810539 33810738 -165819412 + AluJo SINE Alu 139 325 0 3586 139 62 21 chr5 33810738 33810903 -165819247 + L1MA4A LINE L1 6141 6298 -5 1675 142 81 72 chr5 33810909 33811268 -165818882 + MLT1B LTR MaLR 27 388 -2 2041 130 30 0 chr5 33811676 33811977 -165818173 + AluSx SINE Alu 1 310 -2 527 220 193 62 chr5 33812439 33812800 -165817350 + L1MC5 LINE L1 6906 7244 -717 1778 156 74 52 chr5 33812808 33813079 -165817071 - MLT1A2 LTR MaLR 0 374 91 2324 116 35 27 chr5 33813079 33813451 -165816699 - THE1C LTR MaLR 0 375 1 1778 156 74 52 chr5 33813451 33813545 -165816605 - MLT1A2 LTR MaLR -283 91 1 287 267 133 13 chr5 33813551 33813701 -165816449 + L1MC4 LINE L1 7328 7495 -547 * 311 205 150 24 chr5 33813675 33813802 -165816348 + L1MC5 LINE L1 7303 7445 -516 432 238 38 38 chr5 33813805 33813990 -165816160 + L1MC5 LINE L1 7492 7676 -285 594 171 0 0 chr5 33814042 33814130 -165816020 - AluJ/FLAM SINE Alu -223 89 2 652 256 32 127 chr5 33814197 33814600 -165815550 + MLT1E-int LTR MaLR 1003 1367 -4 2030 256 71 14 chr5 33814612 33815162 -165814988 + MLT1E LTR MaLR 13 593 0 411 258 33 8 chr5 33815162 33815282 -165814868 - MIR SINE MIR -62 200 78 429 258 68 94 chr5 33815577 33816034 -165814116 + MER65A LTR ERV1 1 445 0 553 264 155 47 chr5 33816417 33816479 -165813671 + L1ME4a LINE L1 5519 5573 -548 2133 216 81 49 chr5 33816479 33817095 -165813055 + MER92B LTR ERV1 1 636 0 553 264 155 47 chr5 33817095 33817548 -165812602 + L1ME4a LINE L1 5573 6090 -31 34 0 0 0 chr5 33817549 33817583 -165812567 + AT_rich Low_complexity Low_complexity 1 34 0 2061 116 10 3 chr5 33818156 33818450 -165811700 + AluSq SINE Alu 1 296 -17 292 237 64 77 chr5 33820320 33820476 -165809674 + MLT1J1 LTR MaLR 289 442 -4 2936 75 0 11 chr5 33820886 33821257 -165808893 + L1PA8 LINE L1 5806 6172 0 298 198 107 66 chr5 33821924 33822045 -165808105 + MLT1J1 LTR MaLR 4 129 -317 242 29 29 0 chr5 33822139 33822174 -165807976 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2498 55 0 0 chr5 33822176 33822467 -165807683 - AluY SINE Alu -20 291 1 291 114 0 0 chr5 33825769 33825813 -165804337 + (A)n Simple_repeat Simple_repeat 1 44 0 610 277 96 36 chr5 33826265 33826732 -165803418 + L1MC4a LINE L1 5385 5822 -2173 1661 162 17 30 chr5 33826732 33827034 -165803116 + AluSx SINE Alu 6 303 -9 610 277 96 36 chr5 33827034 33827282 -165802868 + L1MC4a LINE L1 5822 7988 -7 2390 65 0 0 chr5 33827289 33827581 -165802569 - AluY SINE Alu -19 292 1 288 212 0 0 chr5 33827939 33828005 -165802145 + CT-rich Low_complexity Low_complexity 4 69 0 245 238 89 10 chr5 33828273 33828374 -165801776 + L1ME LINE L1 5709 5817 -304 269 208 69 0 chr5 33828510 33828582 -165801568 - MER103 DNA DNA -63 103 27 995 128 0 0 chr5 33828616 33828749 -165801401 - FLAM_C SINE Alu 0 133 1 3628 70 2 0 chr5 33829957 33830426 -165799724 + L1PA13 LINE L1 5708 6177 0 1818 119 11 8 chr5 33830860 33831120 -165799030 + AluSx SINE Alu 1 261 -51 185 293 17 0 chr5 33831205 33831263 -165798887 - MIR SINE MIR -66 142 84 1949 150 3 10 chr5 33831821 33832121 -165798029 + AluSx SINE Alu 1 298 -14 516 275 89 44 chr5 33832985 33833189 -165796961 + L1ME4a LINE L1 5672 5866 -255 1609 204 0 17 chr5 33833189 33833488 -165796662 + AluJb SINE Alu 1 294 -18 516 275 89 44 chr5 33833488 33833712 -165796438 + L1ME4a LINE L1 5866 6119 -2 889 179 46 15 chr5 33835669 33835865 -165794285 - L1MA8 LINE L1 -7 6284 6083 2255 102 0 3 chr5 33835979 33836274 -165793876 + AluSx SINE Alu 1 294 -18 216 317 24 0 chr5 33836597 33836679 -165793471 + GA-rich Low_complexity Low_complexity 1 84 0 290 278 103 10 chr5 33837485 33837582 -165792568 + MER39 LTR ERV1 1 106 -601 1597 173 108 6 chr5 33837774 33838109 -165792041 + LTR48 LTR ERV1 84 452 -335 4238 136 33 13 chr5 33838114 33838811 -165791339 + MER50 LTR ERV1 1 711 -23 434 213 11 34 chr5 33838852 33839038 -165791112 + LTR48B LTR ERV1 429 644 0 22 56 0 0 chr5 33840255 33840291 -165789859 + AT_rich Low_complexity Low_complexity 1 36 0 201 286 36 0 chr5 33841064 33841120 -165789030 + MIR SINE MIR 38 95 -113 230 0 33 0 chr5 33842058 33842088 -165788062 + (CAA)n Simple_repeat Simple_repeat 2 32 0 855 147 0 15 chr5 33843264 33843400 -165786750 + AluJo SINE Alu 1 134 -178 180 250 42 56 chr5 33843446 33843518 -165786632 - L3 LINE CR1 -525 1052 982 796 211 78 12 chr5 33844588 33844754 -165785396 + MER5B DNA MER1_type 2 178 0 388 288 217 0 chr5 33844787 33844999 -165785151 - MIR SINE MIR 0 262 5 416 204 46 37 chr5 33845167 33845275 -165784875 + MLT1C LTR MaLR 1 109 -358 935 242 21 33 chr5 33845418 33845658 -165784492 + MER93a LTR ERV1 166 402 0 * 2014 168 42 21 chr5 33845658 33846030 -165784120 + MLT1C LTR MaLR 86 465 -2 204 40 0 0 chr5 33847570 33847595 -165782555 + (TG)n Simple_repeat Simple_repeat 1 25 0 360 0 0 0 chr5 33847598 33847638 -165782512 + (GA)n Simple_repeat Simple_repeat 1 40 0 394 165 24 2 chr5 33847680 33847769 -165782381 - LTR50 LTR ERVL 0 795 435 505 245 199 25 chr5 33847775 33848182 -165781968 - LTR50 LTR ERVL -184 611 2 570 257 41 0 chr5 33848496 33848679 -165781471 + LTR50 LTR ERVL 326 604 -191 1975 192 11 6 chr5 33848976 33849330 -165780820 - MLT2D LTR ERVL -51 363 8 2841 146 49 0 chr5 33849790 33850221 -165779929 + LTR47A LTR ERVL 1 452 0 495 230 224 50 chr5 33850301 33850644 -165779506 + MLT1L LTR MaLR 172 574 -41 362 259 153 48 chr5 33851058 33851286 -165778864 + MLT1J2 LTR MaLR 74 325 -125 993 141 0 0 chr5 33851315 33851464 -165778686 + AluSg/x SINE Alu 143 291 -21 289 169 34 0 chr5 33851480 33851539 -165778611 + MLT1J1 LTR MaLR 367 427 -19 306 293 88 28 chr5 33851618 33851799 -165778351 + L2 LINE L2 3121 3312 -1 600 236 117 60 chr5 33851801 33852053 -165778097 + MIR SINE MIR 3 262 0 420 295 0 9 chr5 33853046 33853151 -165776999 - MIR SINE MIR -89 119 16 284 284 80 0 chr5 33853311 33853399 -165776751 + MIR3 SINE MIR 3 97 -111 1068 231 57 0 chr5 33853694 33853906 -165776244 - MER58A DNA MER1_type 0 224 1 257 270 56 40 chr5 33854236 33854362 -165775788 - LTR67 LTR ERVL -2 555 428 387 169 0 0 chr5 33855718 33855789 -165774361 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 438 20 0 0 chr5 33855789 33855840 -165774310 + (GA)n Simple_repeat Simple_repeat 2 52 0 1706 168 15 4 chr5 33855841 33856115 -165774035 - AluJb SINE Alu -35 277 1 1802 164 40 58 chr5 33858383 33858677 -165771473 - MLT1B LTR MaLR 0 390 103 1928 176 14 6 chr5 33858677 33859034 -165771116 - MLT1A1 LTR MaLR -2 363 4 1802 164 40 58 chr5 33859034 33859136 -165771014 - MLT1B LTR MaLR -287 103 1 1835 143 20 0 chr5 33859507 33859800 -165770350 - Tigger3(Golem) DNA MER2_type -1 3028 2730 2032 142 51 20 chr5 33859800 33860153 -165769997 - THE1B LTR MaLR 0 364 1 9932 100 3 0 chr5 33860153 33861484 -165768666 - THE1B-int LTR MaLR 0 1580 246 1183 65 0 13 chr5 33861484 33861639 -165768511 - HERV17 LTR ERV1 -6936 1690 1538 5592 86 3 55 chr5 33861806 33862697 -165767453 - HERV17 LTR ERV1 -7078 1548 704 5432 73 1 1 chr5 33862896 33863580 -165766570 - HERV17 LTR ERV1 -7921 705 22 3474 133 15 4 chr5 33863602 33864121 -165766029 - LTR17 LTR ERV1 0 780 256 578 147 20 0 chr5 33864122 33864224 -165765926 - MLT2D LTR ERVL -213 201 98 3548 144 37 5 chr5 33864224 33864691 -165765459 + L1PA16 LINE L1 5001 5510 -656 1854 151 0 13 chr5 33864691 33864995 -165765155 + AluSq SINE Alu 1 300 -13 3548 144 37 5 chr5 33864995 33865325 -165764825 + L1PA16 LINE L1 5510 5828 -338 1959 170 15 0 chr5 33865333 33865675 -165764475 - MER50 LTR ERV1 -387 347 1 279 189 61 61 chr5 33865698 33865830 -165764320 + L1MC5 LINE L1 7460 7591 -370 26 82 0 0 chr5 33865921 33865982 -165764168 + AT_rich Low_complexity Low_complexity 1 61 0 4557 115 6 1 chr5 33865996 33866657 -165763493 - THE1B-int LTR MaLR -916 664 1 2178 110 51 28 chr5 33866657 33867013 -165763137 - THE1B LTR MaLR 0 364 1 289 220 95 71 chr5 33867015 33867183 -165762967 + L1MC5 LINE L1 7751 7922 -39 194 287 58 23 chr5 33867385 33867472 -165762678 - L2 LINE L2 0 3272 3183 294 29 0 0 chr5 33867836 33867871 -165762279 + (GA)n Simple_repeat Simple_repeat 2 36 0 438 332 69 43 chr5 33868504 33868808 -165761342 + L2 LINE L2 3002 3313 0 277 198 37 49 chr5 33869352 33869433 -165760717 + MLT1J1 LTR MaLR 1 80 -366 257 306 20 20 chr5 33869556 33869654 -165760496 + MLT1J1 LTR MaLR 278 375 -71 618 227 0 8 chr5 33871468 33871596 -165758554 - FLAM_C SINE Alu -16 127 1 629 25 0 12 chr5 33871670 33871750 -165758400 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 2459 50 0 3 chr5 33872366 33872664 -165757486 + AluY SINE Alu 1 297 -14 316 285 117 15 chr5 33873363 33873500 -165756650 - MIR SINE MIR -2 260 110 1900 243 41 14 chr5 33873580 33874087 -165756063 + MER90 LTR ERV1 92 612 -2 2942 216 20 14 chr5 33874887 33875196 -165754954 + L1MB3 LINE L1 5468 5774 -409 252 0 0 0 chr5 33875196 33875224 -165754926 + (TG)n Simple_repeat Simple_repeat 2 29 0 2942 216 20 14 chr5 33875224 33875621 -165754529 + L1MB3 LINE L1 5774 6178 -5 233 301 62 48 chr5 33876361 33876507 -165753643 - Charlie8 DNA MER1_type -1941 476 329 1850 162 44 16 chr5 33877626 33877991 -165752159 - THE1C LTR MaLR 0 375 1 919 183 31 0 chr5 33878663 33878854 -165751296 - L1M2 LINE L1 -673 5639 5443 2456 189 31 17 chr5 33878860 33879437 -165750713 + L1MA10 LINE L1 5742 6326 -8 388 357 7 0 chr5 33879616 33879759 -165750391 - MIR SINE MIR -106 156 13 285 301 130 8 chr5 33880312 33880435 -165749715 + MIR SINE MIR 2 139 -123 234 343 39 20 chr5 33882317 33882419 -165747731 - MIR SINE MIR -135 127 24 404 306 107 0 chr5 33882499 33882751 -165747399 - MER20B DNA MER1_type -1 782 504 341 296 39 34 chr5 33883136 33883342 -165746808 - L1ME4a LINE L1 -161 5960 5754 3681 121 2 34 chr5 33883997 33884306 -165745844 - L1P LINE L1 -842 5304 5023 2345 72 0 16 chr5 33884306 33884612 -165745538 - AluY SINE Alu -10 301 1 3681 121 2 34 chr5 33884612 33884922 -165745228 - L1P LINE L1 -1123 5023 4705 6615 62 0 2 chr5 33884922 33885770 -165744380 + L1PA7 LINE L1 5308 6153 -1 1494 177 26 39 chr5 33886888 33887199 -165742951 - AluJb SINE Alu -5 307 1 24 32 0 0 chr5 33887785 33887816 -165742334 + AT_rich Low_complexity Low_complexity 1 31 0 631 179 0 15 chr5 33887994 33888128 -165742022 - FLAM_C SINE Alu -1 132 1 640 299 28 24 chr5 33888293 33888504 -165741646 - LTR16A LTR ERVL -2 448 237 1570 202 16 58 chr5 33888606 33888987 -165741163 + MLT1A1 LTR MaLR 1 365 0 338 185 31 0 chr5 33889430 33889495 -165740655 + HsTC2 DNA Tc2 478 544 -1354 1877 189 29 3 chr5 33889914 33890257 -165739893 + MLT1A1 LTR MaLR 14 365 0 204 125 0 0 chr5 33890739 33890771 -165739379 + (TTC)n Simple_repeat Simple_repeat 2 33 0 25 0 0 0 chr5 33891066 33891091 -165739059 + AT_rich Low_complexity Low_complexity 1 25 0 296 284 47 24 chr5 33892698 33892825 -165737325 + L2 LINE L2 1855 1984 -1330 1781 224 65 9 chr5 33892848 33893344 -165736806 + LTR27 LTR ERV1 2 501 0 812 219 47 61 chr5 33894277 33894556 -165735594 - L1MA4A LINE L1 -23 6280 6006 398 303 118 0 chr5 33894828 33895006 -165735144 + L2 LINE L2 3115 3313 0 535 206 0 0 chr5 33895543 33895640 -165734510 - MLT1A1 LTR MaLR 0 365 269 310 177 152 25 chr5 33895746 33895825 -165734325 + L1MEc LINE L1 1983 2071 -4325 307 252 86 86 chr5 33895871 33896022 -165734128 + L1MEc LINE L1 2076 2226 -4170 500 305 121 0 chr5 33896718 33896892 -165733258 - MIR SINE MIR -65 197 3 961 196 106 73 chr5 33898800 33899223 -165730927 - LTR56 LTR ERV1 0 445 9 1096 216 22 117 chr5 33899290 33899693 -165730457 - MLT1A1 LTR MaLR 0 365 1 229 376 64 7 chr5 33899700 33899841 -165730309 + MIR SINE MIR 84 232 -30 28 29 0 0 chr5 33899853 33899888 -165730262 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr5 33900468 33900492 -165729658 + AT_rich Low_complexity Low_complexity 1 24 0 822 276 42 8 chr5 33900564 33900803 -165729347 + MIR SINE MIR 16 262 0 302 319 99 39 chr5 33901391 33901623 -165728527 - L1ME LINE L1 -521 5600 5355 24 32 0 0 chr5 33901638 33901669 -165728481 + AT_rich Low_complexity Low_complexity 1 31 0 2598 36 42 0 chr5 33901972 33902304 -165727846 + L1PA5 LINE L1 5809 6154 0 599 150 0 60 chr5 33902593 33902726 -165727424 - FRAM SINE Alu 0 176 52 2085 121 3 14 chr5 33902849 33903146 -165727004 + AluSq SINE Alu 3 296 -17 22 35 0 0 chr5 33903161 33903190 -165726960 + AT_rich Low_complexity Low_complexity 1 29 0 1990 242 35 12 chr5 33903279 33903792 -165726358 + L1MD3 LINE L1 7471 7995 0 2069 124 3 6 chr5 33903833 33904147 -165726003 - AluSq SINE Alu 0 313 1 22 70 0 0 chr5 33904149 33904192 -165725958 + AT_rich Low_complexity Low_complexity 1 43 0 22 70 0 0 chr5 33906857 33906900 -165723250 + AT_rich Low_complexity Low_complexity 1 43 0 186 133 0 0 chr5 33907340 33907370 -165722780 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 1833 198 90 48 chr5 33908194 33908673 -165721477 + MLT1D LTR MaLR 7 505 0 823 316 53 34 chr5 33909100 33909480 -165720670 - MLT1G1 LTR MaLR -201 394 8 414 281 47 32 chr5 33911013 33911270 -165718880 - MLT1J LTR MaLR -123 323 64 1644 189 0 29 chr5 33911688 33912000 -165718150 + AluJo SINE Alu 1 303 -9 331 294 93 26 chr5 33912227 33912421 -165717729 + MLT1L LTR MaLR 374 580 -35 30 59 0 0 chr5 33912894 33912945 -165717205 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr5 33914288 33914311 -165715839 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr5 33914380 33914428 -165715722 + AT_rich Low_complexity Low_complexity 1 48 0 190 397 0 0 chr5 33914618 33914691 -165715459 - L2 LINE L2 -4 3268 3196 2451 67 0 3 chr5 33914759 33915059 -165715091 + AluY SINE Alu 1 299 -12 1686 266 98 32 chr5 33915271 33915906 -165714244 - L1MEc LINE L1 -3085 3297 2705 2025 137 3 3 chr5 33915906 33916205 -165713945 - AluSx SINE Alu -13 299 1 1686 266 98 32 chr5 33916205 33916790 -165713360 - L1MEc LINE L1 -3677 2705 2036 1843 117 89 7 chr5 33916824 33917105 -165713045 + AluSx SINE Alu 1 304 -8 1860 170 3 0 chr5 33917395 33917689 -165712461 - AluSx SINE Alu -17 295 1 917 279 46 46 chr5 33917691 33918189 -165711961 - L1MEc LINE L1 -4597 1787 1290 198 191 0 0 chr5 33918217 33918259 -165711891 + (TA)n Simple_repeat Simple_repeat 1 42 0 1833 219 44 38 chr5 33918798 33919300 -165710850 - MLT1D LTR MaLR 0 505 1 2308 133 28 22 chr5 33919809 33920171 -165709979 + THE1B LTR MaLR 1 364 0 2218 120 17 9 chr5 33920617 33920967 -165709183 - THE1A LTR MaLR -2 353 1 1700 228 0 27 chr5 33921020 33921393 -165708757 + MLT1A1 LTR MaLR 1 363 -2 3498 207 95 86 chr5 33921395 33922559 -165707591 + MLT1A1-int LTR MaLR 2 1176 -559 198 208 0 0 chr5 33922650 33922703 -165707447 + (CATA)n Simple_repeat Simple_repeat 4 56 0 2352 150 57 2 chr5 33923613 33924019 -165706131 - MSTA LTR MaLR 0 428 1 1952 183 19 0 chr5 33925750 33926122 -165704028 + L1MA7 LINE L1 5487 5865 -426 1521 165 216 3 chr5 33926124 33926475 -165703675 + MSTA LTR MaLR 3 428 0 2680 134 0 0 chr5 33926477 33926880 -165703270 + THE1C-int LTR MaLR 3 405 -1175 1318 105 0 0 chr5 33926887 33927059 -165703091 - AluSg/x SINE Alu -1 311 140 6512 169 31 9 chr5 33927120 33928259 -165701891 + THE1C-int LTR MaLR 417 1580 0 1619 152 97 29 chr5 33928261 33928610 -165701540 + THE1C LTR MaLR 3 375 0 1029 198 32 0 chr5 33928610 33928914 -165701236 + L1MA7 LINE L1 5861 6280 -11 21 36 0 0 chr5 33929029 33929057 -165701093 + AT_rich Low_complexity Low_complexity 1 28 0 273 210 0 0 chr5 33929434 33929496 -165700654 + (CATA)n Simple_repeat Simple_repeat 3 64 0 1502 319 80 40 chr5 33929712 33930362 -165699788 + MER115 DNA AcHobo 8 683 -10 2447 134 26 2 chr5 33930803 33931228 -165698922 + L1MA5A LINE L1 5860 6294 -3 2024 118 7 0 chr5 33931415 33931715 -165698435 + AluSx SINE Alu 1 302 0 432 97 0 0 chr5 33931717 33931779 -165698371 + (TA)n Simple_repeat Simple_repeat 2 63 0 30 0 0 0 chr5 33933815 33933845 -165696305 + AT_rich Low_complexity Low_complexity 1 30 0 7208 69 7 3 chr5 33933928 33934882 -165695268 - L1P LINE L1 -1689 4457 3500 6888 65 3 0 chr5 33934882 33936470 -165693680 + L1PA6 LINE L1 4598 6154 0 1774 174 23 45 chr5 33937155 33937552 -165692598 + MLT1B LTR MaLR 1 388 -2 27 0 0 0 chr5 33937808 33937835 -165692315 + AT_rich Low_complexity Low_complexity 1 27 0 270 370 92 0 chr5 33938097 33938270 -165691880 - MIR SINE MIR -11 251 63 240 264 0 0 chr5 33938444 33938531 -165691619 + (TA)n Simple_repeat Simple_repeat 1 87 0 29 47 0 0 chr5 33938605 33938648 -165691502 + AT_rich Low_complexity Low_complexity 1 43 0 1038 195 0 63 chr5 33940305 33940432 -165689718 - MLT1C LTR MaLR 0 467 358 2189 108 3 0 chr5 33940432 33940728 -165689422 - AluY SINE Alu -14 297 1 1038 195 0 63 chr5 33940728 33940821 -165689329 - MLT1C LTR MaLR -109 358 261 601 101 18 46 chr5 33940821 33940930 -165689220 - L1M2 LINE L1 -799 5513 5408 687 242 6 0 chr5 33940932 33941089 -165689061 + L1MA9 LINE L1 5884 6041 -271 348 276 23 0 chr5 33941226 33941313 -165688837 + L1PA16 LINE L1 2082 2170 -5411 2298 104 3 3 chr5 33941460 33941768 -165688382 + AluSx SINE Alu 1 308 -4 8654 237 90 25 chr5 33941862 33944171 -165685979 + L1PA16 LINE L1 2182 4340 -3264 2119 93 0 4 chr5 33944171 33944465 -165685685 + AluSg SINE Alu 14 306 0 8654 237 90 25 chr5 33944465 33947147 -165683003 + L1PA16 LINE L1 4340 7604 0 42971 35 22 2 chr5 33947156 33953342 -165676808 + L1HS LINE L1 3 6155 0 209 200 0 0 chr5 33953992 33954032 -165676118 - MER5B DNA MER1_type 0 178 139 196 270 79 45 chr5 33954141 33954230 -165675920 + MER5B DNA MER1_type 87 178 0 2085 125 0 0 chr5 33955385 33955681 -165674469 - AluSx SINE Alu -16 296 1 1636 254 36 18 chr5 33956736 33957232 -165672918 + MLT1D LTR MaLR 1 505 0 2307 98 0 0 chr5 33957412 33957717 -165672433 - AluSx SINE Alu -7 305 1 222 227 0 45 chr5 33958250 33958316 -165671834 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 495 318 9 57 chr5 33959869 33960080 -165670070 + MIR SINE MIR 2 202 -60 186 171 0 0 chr5 33960117 33960158 -165669992 + GA-rich Low_complexity Low_complexity 2 42 0 258 277 0 0 chr5 33960278 33960343 -165669807 - LTR16A1 LTR ERVL -2 455 391 2065 205 40 5 chr5 33961425 33961805 -165668345 - MSTD LTR MaLR -3 393 1 658 105 44 44 chr5 33962547 33962661 -165667489 + L1PA14 LINE L1 6044 6157 -4 39 68 0 0 chr5 33962735 33962809 -165667341 + AT_rich Low_complexity Low_complexity 1 74 0 26 50 0 0 chr5 33963010 33963050 -165667100 + AT_rich Low_complexity Low_complexity 1 40 0 26 50 0 0 chr5 33964021 33964061 -165666089 + AT_rich Low_complexity Low_complexity 1 40 0 234 0 0 0 chr5 33964128 33964154 -165665996 + (CA)n Simple_repeat Simple_repeat 2 27 0 1819 221 29 8 chr5 33964299 33964674 -165665476 + MLT2B3 LTR ERVL 133 515 -39 182 152 0 43 chr5 33964680 33964726 -165665424 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 25 31 0 0 chr5 33964903 33964935 -165665215 + AT_rich Low_complexity Low_complexity 1 32 0 388 197 0 0 chr5 33965282 33965348 -165664802 - U4 snRNA snRNA -79 66 1 25 31 0 0 chr5 33965418 33965450 -165664700 + AT_rich Low_complexity Low_complexity 1 32 0 342 67 0 0 chr5 33967578 33967623 -165662527 + (TG)n Simple_repeat Simple_repeat 2 46 0 688 330 105 6 chr5 33967678 33968029 -165662121 - LTR16B LTR ERVL -31 433 48 1124 210 36 88 chr5 33968159 33968544 -165661606 + MLT1A1 LTR MaLR 1 365 0 1533 162 4 50 chr5 33968648 33969039 -165661111 - L1M LINE L1 -740 5428 5067 * 4003 196 30 32 chr5 33969022 33969937 -165660213 + L1MA10 LINE L1 5420 6332 -2 25 51 0 0 chr5 33970662 33970701 -165659449 + AT_rich Low_complexity Low_complexity 1 39 0 254 273 0 0 chr5 33970807 33970862 -165659288 - MLT1I LTR MaLR 0 409 355 300 308 38 23 chr5 33970991 33971124 -165659026 - MLT1I LTR MaLR -270 139 5 270 343 66 28 chr5 33971127 33971340 -165658810 - L3 LINE CR1 -921 656 436 1702 137 22 41 chr5 33971412 33971727 -165658423 - MER44D DNA MER2_type -1 608 30 338 302 39 8 chr5 33971833 33971962 -165658188 + MIR SINE MIR 81 213 -49 248 303 51 29 chr5 33972107 33972282 -165657868 - L1ME LINE L1 -303 5818 5640 21 36 0 0 chr5 33972598 33972626 -165657524 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr5 33972921 33972950 -165657200 + AT_rich Low_complexity Low_complexity 1 29 0 256 253 77 0 chr5 33973006 33973097 -165657053 + MLT1I LTR MaLR 312 409 0 1822 123 0 4 chr5 33973399 33973667 -165656483 - AluSg SINE Alu -43 267 1 2101 74 17 37 chr5 33974061 33974357 -165655793 - AluY SINE Alu -21 290 1 1838 152 3 3 chr5 33974359 33974649 -165655501 - AluJo SINE Alu -16 296 7 2685 32 3 3 chr5 33975417 33975727 -165654423 + L1PA2 LINE L1 5846 6155 0 1389 195 102 0 chr5 33975911 33976167 -165653983 + AluJb SINE Alu 1 282 -30 299 25 25 0 chr5 33976167 33976207 -165653943 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 1820 161 21 0 chr5 33976221 33976506 -165653644 + AluJb SINE Alu 1 291 -21 583 183 92 0 chr5 33976510 33976630 -165653520 - MER3 DNA MER1_type -57 152 22 1557 183 14 30 chr5 33976632 33976791 -165653359 - AluJb SINE Alu -21 291 138 2371 98 0 7 chr5 33976791 33977097 -165653053 - AluSg SINE Alu -6 304 1 1557 183 14 30 chr5 33977097 33977232 -165652918 - AluJb SINE Alu -174 138 2 1856 149 3 45 chr5 33977295 33977603 -165652547 + AluSx SINE Alu 1 295 -17 216 336 82 27 chr5 33977756 33977866 -165652284 + MER5B DNA MER1_type 55 170 -8 * 269 211 0 0 chr5 33977858 33977915 -165652235 + MIR3 SINE MIR 147 203 -5 910 102 0 0 chr5 33978073 33978191 -165651959 + FLAM_C SINE Alu 1 118 -15 2114 138 3 3 chr5 33978511 33978849 -165651301 + AluSx SINE Alu 1 312 0 1416 163 41 91 chr5 33979252 33979375 -165650775 + AluJo SINE Alu 2 130 -182 1739 133 18 14 chr5 33979375 33979654 -165650496 + AluSg SINE Alu 1 280 -30 1416 163 41 91 chr5 33979654 33979850 -165650300 + AluJo SINE Alu 130 305 -7 257 248 191 19 chr5 33979920 33980025 -165650125 - L2 LINE L2 -212 3060 2938 2055 112 6 29 chr5 33980074 33980386 -165649764 - AluSx SINE Alu -7 305 1 1447 157 39 57 chr5 33981211 33981339 -165648811 + AluJo SINE Alu 1 130 -182 2049 124 10 0 chr5 33981339 33981629 -165648521 - AluSx SINE Alu -19 293 1 1447 157 39 57 chr5 33981629 33981780 -165648370 + AluJo SINE Alu 130 275 -37 423 0 0 0 chr5 33981785 33981832 -165648318 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2292 107 0 0 chr5 33982287 33982587 -165647563 - AluSg SINE Alu -10 300 1 23 0 0 0 chr5 33982610 33982633 -165647517 + AT_rich Low_complexity Low_complexity 1 23 0 1980 122 0 0 chr5 33982633 33982903 -165647247 - AluSx SINE Alu -4 308 39 1588 108 27 0 chr5 33983424 33983742 -165646408 + L1P4 LINE L1 5161 5485 -676 2292 95 0 7 chr5 33983743 33984048 -165646102 + AluSx SINE Alu 2 304 -8 2013 218 137 58 chr5 33984226 33984375 -165645775 + MER82 DNA MER2_type 1 137 -516 2111 112 0 43 chr5 33984375 33984678 -165645472 + AluSx SINE Alu 1 290 -22 2013 218 137 58 chr5 33984678 33985133 -165645017 + MER82 DNA MER2_type 137 653 0 226 321 30 30 chr5 33985323 33985457 -165644693 + MLT1H LTR MaLR 29 162 -387 982 146 16 60 chr5 33985799 33985984 -165644166 - FAM SINE Alu -1 48 1 430 252 50 8 chr5 33986045 33986164 -165643986 + MLT1G1 LTR MaLR 16 139 -456 2440 120 25 8 chr5 33986263 33986621 -165643529 + THE1B LTR MaLR 1 364 0 9483 107 65 45 chr5 33986622 33988164 -165641986 + THE1B-int LTR MaLR 2 1574 -6 1283 123 49 5 chr5 33988171 33988374 -165641776 + THE1B LTR MaLR 3 214 -150 801 177 15 0 chr5 33988383 33988513 -165641637 - FLAM_C SINE Alu -1 132 1 662 146 0 0 chr5 33988515 33988618 -165641532 - AluSp/q SINE Alu -1 312 210 21 0 0 0 chr5 33993490 33993511 -165636639 + AT_rich Low_complexity Low_complexity 1 21 0 305 245 113 19 chr5 33993919 33994025 -165636125 + L2 LINE L2 3104 3219 -94 1691 163 80 0 chr5 33994029 33994329 -165635821 + MER2 DNA MER2_type 1 324 -21 1370 118 91 0 chr5 33994329 33994550 -165635600 + L1MA6 LINE L1 6056 6296 -4 23 33 0 0 chr5 33994566 33994596 -165635554 + AT_rich Low_complexity Low_complexity 1 30 0 1674 217 13 59 chr5 33994826 33994870 -165635280 + MLT1A2 LTR MaLR 1 45 -329 2505 57 3 0 chr5 33994870 33995167 -165634983 + AluY SINE Alu 1 298 -13 1674 217 13 59 chr5 33995167 33995445 -165634705 + MLT1A2 LTR MaLR 45 304 -70 1935 162 30 0 chr5 33995445 33995748 -165634402 - AluSx SINE Alu 0 312 1 1674 217 13 59 chr5 33995748 33995816 -165634334 + MLT1A2 LTR MaLR 304 374 0 1021 191 77 0 chr5 33995836 33995964 -165634186 + MER3 DNA MER1_type 1 150 -59 2480 59 0 10 chr5 33995964 33996270 -165633880 - AluY SINE Alu -8 303 1 1021 191 77 0 chr5 33996270 33996335 -165633815 + MER3 DNA MER1_type 150 209 0 636 210 107 51 chr5 33996832 33997031 -165633119 - MLT1F LTR MaLR 0 626 334 1351 181 49 58 chr5 33997032 33997264 -165632886 - MLT1A1 LTR MaLR 0 365 134 2011 124 0 28 chr5 33997264 33997595 -165632555 + AluSg SINE Alu 1 323 0 1351 181 49 58 chr5 33997595 33997687 -165632463 - MLT1A1 LTR MaLR -231 134 43 528 300 13 0 chr5 33997895 33998045 -165632105 - MLT1F LTR MaLR -400 167 16 399 371 34 21 chr5 33999269 33999560 -165630590 + L2 LINE L2 1978 2272 -1042 21 0 0 0 chr5 33999962 33999983 -165630167 + AT_rich Low_complexity Low_complexity 1 21 0 256 302 94 9 chr5 34000378 34000484 -165629666 + L2 LINE L2 3158 3272 0 23 33 0 0 chr5 34001767 34001797 -165628353 + AT_rich Low_complexity Low_complexity 1 30 0 300 273 0 0 chr5 34002152 34002240 -165627910 + MIR SINE MIR 100 187 -75 1985 215 14 65 chr5 34002318 34002716 -165627434 + L1M2 LINE L1 2528 2945 -3903 2154 133 0 0 chr5 34002716 34003017 -165627133 + AluSg SINE Alu 1 301 -9 1985 215 14 65 chr5 34003017 34003533 -165626617 + L1M2 LINE L1 2945 3392 -3456 2712 189 47 2 chr5 34003533 34004061 -165626089 + L1PB4 LINE L1 5604 6155 -1 3300 232 61 22 chr5 34004213 34004647 -165625503 + L1MC3 LINE L1 6147 6563 -1222 2057 170 123 5 chr5 34004647 34005030 -165625120 + MSTA LTR MaLR 1 428 0 3300 232 61 22 chr5 34005030 34005532 -165624618 + L1MC3 LINE L1 6563 7119 -666 606 211 34 46 chr5 34005596 34005771 -165624379 + MER104 DNA Tc2 7 179 -1 204 40 0 0 chr5 34006586 34006611 -165623539 + (TA)n Simple_repeat Simple_repeat 1 25 0 2367 67 0 10 chr5 34007101 34007400 -165622750 - AluY SINE Alu -15 296 1 584 225 7 53 chr5 34007713 34007864 -165622286 - MER20 DNA MER1_type -52 167 24 770 249 19 19 chr5 34008225 34008430 -165621720 + MER20 DNA MER1_type 8 212 -7 672 168 40 0 chr5 34008621 34008746 -165621404 + L1PA13 LINE L1 6033 6162 -1 33 0 0 0 chr5 34009406 34009439 -165620711 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr5 34010118 34010142 -165620008 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 34010201 34010229 -165619921 + AT_rich Low_complexity Low_complexity 1 28 0 3545 33 0 0 chr5 34010715 34011136 -165619014 - L1PA3 LINE L1 -14 6141 5721 6897 22 0 0 chr5 34011136 34012295 -165617855 + L1PA3 LINE L1 4563 5721 -434 429 268 0 0 chr5 34012465 34012562 -165617588 + Tigger3(Golem) DNA MER2_type 2 98 -2931 380 262 0 0 chr5 34012575 34012659 -165617491 + Tigger3(Golem) DNA MER2_type 2954 3037 0 587 165 0 9 chr5 34013005 34013120 -165617030 + (TA)n Simple_repeat Simple_repeat 1 114 0 1958 138 7 0 chr5 34013120 34013418 -165616732 - AluSq SINE Alu -11 302 3 28 48 0 0 chr5 34013776 34013818 -165616332 + AT_rich Low_complexity Low_complexity 1 42 0 1364 208 50 10 chr5 34014943 34015241 -165614909 - AluJo SINE Alu 0 312 3 285 149 0 60 chr5 34016555 34016622 -165613528 + MADE1 DNA Mariner 1 63 -17 243 309 170 31 chr5 34016786 34017045 -165613105 - MLT1J LTR MaLR -210 301 7 329 243 0 162 chr5 34019118 34019291 -165610859 - L2 LINE L2 -4 3309 3165 386 69 17 0 chr5 34019801 34019859 -165610291 + (CA)n Simple_repeat Simple_repeat 1 59 0 531 309 43 13 chr5 34020159 34020392 -165609758 - LTR16A LTR ERVL -184 266 27 23 78 0 0 chr5 34021766 34021817 -165608333 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 34022144 34022173 -165607977 + AT_rich Low_complexity Low_complexity 1 29 0 6187 34 0 1 chr5 34022332 34023072 -165607078 - L1PA3 LINE L1 -3 6152 5414 10610 37 0 0 chr5 34023072 34024375 -165605775 + L1PA3 LINE L1 4101 5403 -743 209 355 117 19 chr5 34024916 34025130 -165605020 + L2 LINE L2 2029 2263 -1051 21 0 0 0 chr5 34025206 34025227 -165604923 + AT_rich Low_complexity Low_complexity 1 21 0 1068 141 98 86 chr5 34025911 34026166 -165603984 - Tigger2 DNA MER2_type -10 2708 2451 3803 183 34 0 chr5 34026220 34026953 -165603197 - Tigger2 DNA MER2_type -1959 759 2 1285 282 94 80 chr5 34027051 34028560 -165601590 + MER110-int LTR ERV1 1952 3590 -1057 675 273 103 8 chr5 34028767 34029020 -165601130 + MLT1D LTR MaLR 1 277 -228 289 170 0 0 chr5 34029023 34029070 -165601080 + MLT1A2 LTR MaLR 1 47 -327 381 300 0 0 chr5 34029112 34029222 -165600928 + MLT1A2 LTR MaLR 51 160 -214 940 191 11 26 chr5 34029274 34029485 -165600665 + MLT1A2 LTR MaLR 182 374 0 * 960 274 9 0 chr5 34029485 34029714 -165600436 + MLT1D LTR MaLR 275 505 0 665 197 108 18 chr5 34029852 34030072 -165600078 - MER33 DNA MER1_type -98 226 1 180 0 0 0 chr5 34030111 34030131 -165600019 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 476 324 43 10 chr5 34030282 34030489 -165599661 + MER110 LTR ERV1 242 455 -36 5207 156 7 7 chr5 34030889 34031731 -165598419 + MSTA-int LTR MaLR 739 1580 0 1582 185 130 18 chr5 34031731 34032115 -165598035 + MSTA LTR MaLR 1 427 -1 1573 251 48 15 chr5 34032556 34033011 -165597139 - MLT1D LTR MaLR 0 505 36 289 308 8 26 chr5 34033282 34033399 -165596751 + MIR SINE MIR 124 238 -24 767 269 28 9 chr5 34034596 34034808 -165595342 + MER20 DNA MER1_type 2 217 -2 219 69 0 0 chr5 34034846 34034875 -165595275 + (T)n Simple_repeat Simple_repeat 1 29 0 314 371 87 27 chr5 34035142 34035544 -165594606 - MLT1J1 LTR MaLR 0 446 21 1062 122 6 0 chr5 34035569 34035725 -165594425 + AluSg/x SINE Alu 151 307 -5 2108 115 10 6 chr5 34035873 34036185 -165593965 - AluSq SINE Alu 0 313 1 410 333 70 33 chr5 34036876 34037089 -165593061 + L1PA16 LINE L1 790 1010 -6564 12236 240 25 20 chr5 34037213 34040945 -165589205 + L1PA16 LINE L1 2182 5895 -1709 1061 173 154 58 chr5 34040945 34041205 -165588945 + AluJo SINE Alu 2 286 -16 706 71 0 18 chr5 34041205 34041317 -165588833 + (GGAA)n Simple_repeat Simple_repeat 3 112 0 12236 240 25 20 chr5 34041317 34042145 -165588005 + L1PA16 LINE L1 5895 6774 -830 1775 86 19 89 chr5 34042145 34042459 -165587691 + L1PA10 LINE L1 5876 6167 -1 12236 240 25 20 chr5 34042459 34043190 -165586960 + L1PA16 LINE L1 6774 7500 -104 2046 192 104 41 chr5 34043589 34044677 -165585473 - pTR5 LTR ERV1 -259 2179 743 424 337 61 4 chr5 34044997 34045261 -165584889 - MER110 LTR ERV1 -26 465 187 254 231 9 111 chr5 34045335 34045443 -165584707 - MER110A LTR ERV1 -298 170 74 229 65 0 43 chr5 34045641 34045687 -165584463 + (TG)n Simple_repeat Simple_repeat 2 45 0 344 119 17 0 chr5 34046637 34046696 -165583454 + (TA)n Simple_repeat Simple_repeat 1 60 0 21 0 0 0 chr5 34047423 34047444 -165582706 + AT_rich Low_complexity Low_complexity 1 21 0 31 82 0 0 chr5 34047865 34047938 -165582212 + AT_rich Low_complexity Low_complexity 1 73 0 366 334 54 49 chr5 34049153 34049526 -165580624 + L1ME LINE L1 4348 4722 -1424 287 295 78 61 chr5 34049725 34050345 -165579805 + L1ME LINE L1 5290 5918 -252 225 300 118 39 chr5 34050520 34050800 -165579350 + L1MC/D LINE L1 5296 5597 -2211 2856 6 0 3 chr5 34050898 34051217 -165578933 + AluYb8 SINE Alu 1 318 0 243 88 0 0 chr5 34051798 34051832 -165578318 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr5 34051872 34051894 -165578256 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 34052067 34052088 -165578062 + AT_rich Low_complexity Low_complexity 1 21 0 2008 139 7 3 chr5 34052231 34052541 -165577609 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr5 34052971 34052993 -165577157 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 34053086 34053109 -165577041 + AT_rich Low_complexity Low_complexity 1 23 0 1293 269 98 44 chr5 34053342 34053967 -165576183 + L1ME LINE L1 3855 4564 -1582 2519 138 24 12 chr5 34053967 34054386 -165575764 + MSTA LTR MaLR 5 428 0 1293 269 98 44 chr5 34054386 34054844 -165575306 + L1ME LINE L1 4564 4996 -1150 790 235 184 27 chr5 34055140 34055514 -165574636 + L1ME LINE L1 5329 5761 -403 4509 157 86 39 chr5 34055579 34055935 -165574215 + L1MC1 LINE L1 5283 5621 -712 1855 191 57 24 chr5 34055935 34056353 -165573797 - MSTB1 LTR MaLR 0 432 1 4509 157 86 39 chr5 34056353 34057000 -165573150 + L1MC1 LINE L1 5621 6333 0 329 0 0 0 chr5 34057478 34057516 -165572634 - L1P1 LINE L1 -621 5534 5497 275 0 0 0 chr5 34057517 34057557 -165572593 + L1PA2 LINE L1 6116 6155 0 479 289 191 33 chr5 34057811 34058178 -165571972 - L2 LINE L2 0 3313 2889 27 29 0 0 chr5 34058259 34058293 -165571857 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr5 34059041 34059064 -165571086 + AT_rich Low_complexity Low_complexity 1 23 0 1567 198 16 29 chr5 34259789 34260103 -165370047 - AluJb SINE Alu -2 310 1 880 259 100 90 chr5 34260158 34260737 -165369413 + MLT1E LTR MaLR 4 588 -5 270 67 17 50 chr5 34262593 34262653 -165367497 + (GGGTG)n Simple_repeat Simple_repeat 4 61 0 299 167 0 28 chr5 34263312 34263384 -165366766 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 2181 102 10 3 chr5 34263552 34263846 -165366304 + AluSx SINE Alu 1 296 -16 393 305 131 27 chr5 34263847 34264167 -165365983 + L2 LINE L2 2742 3086 -186 316 280 122 28 chr5 34264230 34264444 -165365706 - L2 LINE L2 -825 2489 2256 219 311 41 16 chr5 34264553 34264675 -165365475 + L2 LINE L2 2152 2276 -1038 235 310 0 0 chr5 34265284 34265429 -165364721 + C-rich Low_complexity Low_complexity 1 145 0 * 417 151 21 65 chr5 34265324 34265510 -165364640 + (CCA)n Simple_repeat Simple_repeat 1 178 0 314 114 9 48 chr5 34265511 34265616 -165364534 + (CACCC)n Simple_repeat Simple_repeat 1 101 0 12106 185 24 16 chr5 34265920 34268336 -165361814 - L1P5 LINE L1 -424 6378 3925 2269 78 17 3 chr5 34268336 34268630 -165361520 - AluSc SINE Alu -11 298 1 12106 185 24 16 chr5 34268630 34269400 -165360750 - L1P5 LINE L1 -2877 3925 3163 326 236 0 1 chr5 34269403 34269497 -165360653 - L1P5 LINE L1 -4894 1903 1795 30 0 0 0 chr5 34269497 34269527 -165360623 + AT_rich Low_complexity Low_complexity 1 30 0 12972 29 0 0 chr5 34269528 34271834 -165358316 - L1PA3 LINE L1 -1 6154 3844 406 268 79 53 chr5 34272147 34272502 -165357648 + MLT1E3 LTR MaLR 261 624 0 28 91 0 0 chr5 34273980 34274057 -165356093 + AT_rich Low_complexity Low_complexity 1 77 0 2541 49 0 0 chr5 34274971 34275275 -165354875 - AluY SINE Alu -7 304 1 633 158 0 0 chr5 34275290 34275410 -165354740 + CT-rich Low_complexity Low_complexity 2 121 0 221 171 0 0 chr5 34276280 34276348 -165353802 + (TA)n Simple_repeat Simple_repeat 1 68 0 1962 130 4 0 chr5 34277403 34277679 -165352471 + AluSx SINE Alu 1 277 -35 3110 218 15 62 chr5 34279083 34279778 -165350372 + L1MC3 LINE L1 5592 6233 -1552 562 113 94 9 chr5 34279778 34279884 -165350266 + L1PB2 LINE L1 6030 6144 -7 3110 218 15 62 chr5 34279884 34280119 -165350031 + L1MC3 LINE L1 6233 6478 -1307 489 244 171 49 chr5 34280128 34280374 -165349776 + MER57B LTR ERV1 1 276 -126 2030 133 29 32 chr5 34280481 34280857 -165349293 + THE1C LTR MaLR 1 375 0 2270 44 6 72 chr5 34280880 34281201 -165348949 + AluY SINE Alu 1 300 -11 346 189 0 0 chr5 34281276 34281350 -165348800 + MER57A LTR ERV1 330 403 0 1784 233 45 4 chr5 34281350 34281835 -165348315 + L1MC3 LINE L1 6485 6989 -796 1048 115 0 30 chr5 34281837 34282002 -165348148 + AluSg/x SINE Alu 153 312 0 2299 179 107 10 chr5 34282003 34282583 -165347567 + L1MC3 LINE L1 6980 7615 -170 3453 180 55 25 chr5 34283357 34284089 -165346061 + MER21B LTR ERV1 1 754 -109 1223 275 124 28 chr5 34284514 34285053 -165345097 + MLT1F1 LTR MaLR 3 567 0 1486 128 78 101 chr5 34285234 34285540 -165344610 + AluY SINE Alu 5 303 -8 266 292 31 54 chr5 34286901 34287031 -165343119 + L2 LINE L2 2956 3082 -190 213 226 38 0 chr5 34287250 34287303 -165342847 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 742 301 30 15 chr5 34287820 34288218 -165341932 - MER90 LTR ERV1 -9 566 163 2136 118 3 10 chr5 34289532 34289845 -165340305 + AluSq SINE Alu 1 311 -2 24 0 0 0 chr5 34289939 34289963 -165340187 + AT_rich Low_complexity Low_complexity 1 24 0 201 147 0 0 chr5 34290509 34290543 -165339607 + (T)n Simple_repeat Simple_repeat 1 34 0 2240 131 35 8 chr5 34291671 34292100 -165338050 - Tigger2 DNA MER2_type 0 2718 4 560 290 0 0 chr5 34292660 34292784 -165337366 - L2 LINE L2 -4 3309 3186 2344 78 0 3 chr5 34293188 34293484 -165336666 - AluY SINE Alu -16 295 1 182 190 0 17 chr5 34293676 34293734 -165336416 + CT-rich Low_complexity Low_complexity 4 60 0 222 205 0 0 chr5 34295396 34295435 -165334715 + (TG)n Simple_repeat Simple_repeat 1 39 0 269 373 130 22 chr5 34296232 34296554 -165333596 - L2 LINE L2 -1 3271 2915 22 35 0 0 chr5 34296698 34296727 -165333423 + AT_rich Low_complexity Low_complexity 1 29 0 306 243 58 48 chr5 34298061 34298164 -165331986 - MIR SINE MIR -48 214 111 205 179 0 0 chr5 34298341 34298380 -165331770 + T-rich Low_complexity Low_complexity 2 40 0 258 252 135 9 chr5 34299297 34299408 -165330742 - L2 LINE L2 -9 3263 3139 245 225 62 0 chr5 34300393 34300473 -165329677 - L1MC4 LINE L1 -1344 6698 6614 489 125 0 0 chr5 34300518 34300606 -165329544 + (TA)n Simple_repeat Simple_repeat 1 88 0 393 270 46 13 chr5 34302595 34302820 -165327330 + L1MB8 LINE L1 5947 6181 -3 301 223 99 33 chr5 34302850 34302971 -165327179 + L1MEd LINE L1 597 725 -5394 204 122 0 49 chr5 34303652 34303693 -165326457 + MIR SINE MIR 41 79 -129 704 259 42 36 chr5 34303702 34303895 -165326255 + MIR SINE MIR 48 241 -21 512 292 60 0 chr5 34304168 34304336 -165325814 + L2 LINE L2 2550 2727 -587 275 347 48 16 chr5 34305043 34305167 -165324983 + MIR SINE MIR 20 147 -61 390 260 24 55 chr5 34305446 34305573 -165324577 + MIR SINE MIR 31 153 -109 607 188 29 7 chr5 34305712 34305850 -165324300 - L1M1 LINE L1 -7416 149 9 524 140 11 0 chr5 34305888 34305981 -165324169 + GA-rich Low_complexity Low_complexity 1 94 0 564 179 30 146 chr5 34306031 34306152 -165323998 + L1MC/D LINE L1 5215 5348 -1039 2207 99 0 0 chr5 34306152 34306444 -165323706 + AluY SINE Alu 3 294 -17 564 179 30 146 chr5 34306444 34306727 -165323423 + L1MC/D LINE L1 5348 5571 -816 300 230 236 24 chr5 34306950 34307115 -165323035 - MIR SINE MIR 0 262 63 186 43 0 0 chr5 34307635 34307658 -165322492 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 23 33 0 0 chr5 34308631 34308661 -165321489 + AT_rich Low_complexity Low_complexity 1 30 0 201 147 0 0 chr5 34308970 34309004 -165321146 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 527 283 169 5 chr5 34311412 34311596 -165318554 + MIR SINE MIR 8 221 -41 452 296 24 19 chr5 34312539 34312745 -165317405 + L1M4 LINE L1 16 222 -6320 259 261 69 119 chr5 34312943 34313322 -165316828 + L1M4 LINE L1 515 874 -5668 6870 188 16 8 chr5 34313700 34315744 -165314406 + L1P5 LINE L1 3726 5780 -371 990 156 0 0 chr5 34315744 34315917 -165314233 + (TA)n Simple_repeat Simple_repeat 2 174 0 225 143 0 0 chr5 34315926 34315968 -165314182 - LTR66 LTR ERVL -171 439 398 12574 133 113 18 chr5 34316101 34316535 -165313615 - L1PBa LINE L1 -3543 3319 2927 2311 112 3 0 chr5 34316535 34316840 -165313310 - AluSx SINE Alu -6 306 1 12574 133 113 18 chr5 34316840 34318858 -165311292 - L1PBa LINE L1 -3935 2927 637 1141 141 22 0 chr5 34318859 34319043 -165311107 - L1PBa LINE L1 -6675 188 1 1196 180 142 15 chr5 34319108 34319375 -165310775 + MLT1A1 LTR MaLR 1 301 -64 1319 222 2 7 chr5 34319675 34320085 -165310065 + LTR40a LTR ERVL 1 517 -2 683 277 5 5 chr5 34321510 34321694 -165308456 - MLT2F LTR ERVL -4 659 476 184 296 74 0 chr5 34322089 34322170 -165307980 + MIR SINE MIR 104 190 -72 269 193 117 111 chr5 34322475 34322646 -165307504 - L1ME4a LINE L1 -3 6118 5947 32 0 0 0 chr5 34324033 34324065 -165306085 + AT_rich Low_complexity Low_complexity 1 32 0 1196 216 0 11 chr5 34324382 34324655 -165305495 + L1MD3 LINE L1 7725 7994 -1 306 350 29 0 chr5 34324972 34325117 -165305033 - L1ME4a LINE L1 -543 5578 5427 213 378 149 15 chr5 34325358 34325813 -165304337 - L2 LINE L2 -574 2740 2225 910 216 47 0 chr5 34325843 34326033 -165304117 - MER20 DNA MER1_type -20 199 1 312 278 73 52 chr5 34326125 34326316 -165303834 - L2 LINE L2 -1251 2063 1869 3282 206 76 25 chr5 34326738 34327615 -165302535 - MER63C DNA MER1_type 0 930 9 2234 169 58 29 chr5 34328431 34328629 -165301521 + MLT1C LTR MaLR 1 192 -275 267 31 0 0 chr5 34328629 34328661 -165301489 + (CA)n Simple_repeat Simple_repeat 2 33 0 2234 169 58 29 chr5 34328661 34328911 -165301239 + MLT1C LTR MaLR 192 462 -5 478 246 0 36 chr5 34328978 34329088 -165301062 + L2 LINE L2 3160 3265 -7 207 0 0 0 chr5 34329526 34329549 -165300601 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 411 141 0 0 chr5 34330271 34330349 -165299801 + (CA)n Simple_repeat Simple_repeat 2 79 0 308 206 21 41 chr5 34330601 34330698 -165299452 + L1MEd LINE L1 1123 1217 -4902 391 77 0 0 chr5 34331906 34331998 -165298152 + L1PA10 LINE L1 6059 6168 0 235 257 104 45 chr5 34332225 34332417 -165297733 + L1MEd LINE L1 1012 1218 -4901 291 114 0 0 chr5 34332417 34332461 -165297689 + (CA)n Simple_repeat Simple_repeat 2 45 0 331 315 206 11 chr5 34333533 34333800 -165296350 + L1ME LINE L1 5501 5819 -302 2328 98 3 0 chr5 34334912 34335207 -165294943 - AluSg SINE Alu -14 296 1 783 162 214 0 chr5 34336150 34336323 -165293827 + MER2 DNA MER2_type 1 210 -135 25 51 0 0 chr5 34336330 34336369 -165293781 + AT_rich Low_complexity Low_complexity 1 39 0 2535 39 0 16 chr5 34336766 34337071 -165293079 - AluY SINE Alu -11 300 1 23 33 0 0 chr5 34337483 34337513 -165292637 + AT_rich Low_complexity Low_complexity 1 30 0 276 154 0 0 chr5 34337747 34337799 -165292351 + (CA)n Simple_repeat Simple_repeat 2 53 0 796 256 31 75 chr5 34338096 34338389 -165291761 - LTR40a LTR ERVL -118 401 122 188 327 133 40 chr5 34341986 34342136 -165288014 + MIR SINE MIR 98 261 -1 748 138 0 0 chr5 34342306 34342415 -165287735 - MLT1A1 LTR MaLR -256 109 1 13263 191 31 18 chr5 34344409 34348186 -165281964 + L1MA4A LINE L1 6 4132 -2873 2381 90 0 3 chr5 34348186 34348487 -165281663 + AluSc SINE Alu 1 300 -9 13263 191 31 18 chr5 34348487 34351402 -165278748 + L1MA4A LINE L1 4132 7005 0 2060 118 7 14 chr5 34351773 34352069 -165278081 - AluSx SINE Alu -16 296 3 306 0 0 0 chr5 34352221 34352255 -165277895 + (CA)n Simple_repeat Simple_repeat 2 35 0 341 400 43 21 chr5 34352285 34352660 -165277490 + L2 LINE L2 1263 1645 -1669 189 348 174 22 chr5 34352776 34353052 -165277098 - L2 LINE L2 -2787 527 210 1423 228 47 28 chr5 34354045 34354152 -165275998 + MLT2D LTR ERVL 1 104 -310 1602 171 94 3 chr5 34354152 34354461 -165275689 - MER1B DNA MER1_type 0 337 1 1423 228 47 28 chr5 34354461 34354712 -165275438 + MLT2D LTR ERVL 104 366 -48 184 186 34 0 chr5 34354766 34354825 -165275325 + GA-rich Low_complexity Low_complexity 2 62 0 1649 116 64 34 chr5 34354891 34355158 -165274992 + THE1B LTR MaLR 1 275 -89 501 159 34 0 chr5 34355196 34355284 -165274866 - Tigger3(Golem) DNA MER2_type -52 2977 2887 271 184 0 34 chr5 34355299 34355446 -165274704 + (TA)n Simple_repeat Simple_repeat 2 143 0 210 280 0 0 chr5 34355761 34355836 -165274314 + (CATATA)n Simple_repeat Simple_repeat 2 76 0 228 111 93 0 chr5 34355836 34355890 -165274260 - L1MCa LINE L1 -4362 2064 2006 * 256 219 98 0 chr5 34355859 34355941 -165274209 - L1MC4 LINE L1 -1339 6983 6894 264 167 0 0 chr5 34355942 34355990 -165274160 + (TA)n Simple_repeat Simple_repeat 1 48 0 2666 90 3 0 chr5 34355990 34356357 -165273793 + L1PB1 LINE L1 5782 6149 -2 459 73 24 24 chr5 34356748 34356830 -165273320 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 22 35 0 0 chr5 34357893 34357922 -165272228 + AT_rich Low_complexity Low_complexity 1 29 0 249 234 47 0 chr5 34358983 34359047 -165271103 + L2 LINE L2 2864 2930 -342 938 208 0 0 chr5 34359256 34359415 -165270735 - FRAM SINE Alu -7 159 1 182 121 0 30 chr5 34360620 34360653 -165269497 - L2 LINE L2 -968 2346 2315 1115 179 5 0 chr5 34361031 34361163 -165268987 + AluSg1 SINE Alu 1 133 -176 2052 84 3 52 chr5 34361163 34361298 -165268852 + AluSg SINE Alu 1 141 -169 2334 92 0 0 chr5 34361298 34361591 -165268559 + AluY SINE Alu 3 295 -16 2052 84 3 52 chr5 34361591 34361763 -165268387 + AluSg SINE Alu 141 293 -17 769 258 114 54 chr5 34362054 34362620 -165267530 - MLT1F1 LTR MaLR -2 593 14 492 285 186 40 chr5 34363317 34363570 -165266580 + MLT1H LTR MaLR 260 549 0 295 359 39 35 chr5 34363866 34364097 -165266053 + L2 LINE L2 2826 3057 -215 222 283 0 0 chr5 34364578 34364624 -165265526 + (CA)n Simple_repeat Simple_repeat 1 46 0 360 247 10 10 chr5 34364726 34364823 -165265327 - MER94 DNA DNA -33 101 5 2137 123 3 7 chr5 34364897 34365199 -165264951 - AluSq SINE Alu -12 301 1 1531 249 98 32 chr5 34365293 34365943 -165264207 - L1ME2 LINE L1 -19 7166 6474 377 95 16 0 chr5 34368073 34368136 -165262014 + (CA)n Simple_repeat Simple_repeat 1 64 0 8139 128 30 118 chr5 34369250 34369344 -165260806 + L1PBa LINE L1 2 103 -6760 1794 157 53 36 chr5 34369344 34369700 -165260450 - THE1B LTR MaLR 0 364 3 11636 93 2 12 chr5 34369702 34370016 -165260134 - THE1B-int LTR MaLR 0 1580 1265 2336 95 0 28 chr5 34370016 34370333 -165259817 - AluY SINE Alu -2 309 2 11636 93 2 12 chr5 34370333 34371613 -165258537 - THE1B-int LTR MaLR -315 1265 1 2318 100 47 33 chr5 34371613 34371972 -165258178 - THE1B LTR MaLR 0 364 1 8139 128 30 118 chr5 34371972 34372232 -165257918 + L1PBa LINE L1 103 384 -6479 2115 123 16 7 chr5 34372232 34372541 -165257609 + AluSx SINE Alu 1 312 0 8139 128 30 118 chr5 34372541 34373907 -165256243 + L1PBa LINE L1 384 1574 -5289 3526 155 24 3 chr5 34373894 34374858 -165255292 + L1PB1 LINE L1 4810 5789 -362 * 310 267 58 0 chr5 34374859 34374945 -165255205 + L1MC4 LINE L1 6616 6706 -1336 2038 153 5 24 chr5 34374960 34375338 -165254812 + L1PB1 LINE L1 5781 6151 0 203 137 59 20 chr5 34375640 34375691 -165254459 + T-rich Low_complexity Low_complexity 5 57 0 318 289 39 95 chr5 34375712 34376017 -165254133 - L1ME2 LINE L1 -747 6420 6133 22 35 0 0 chr5 34376222 34376251 -165253899 + AT_rich Low_complexity Low_complexity 1 29 0 1105 191 121 59 chr5 34377023 34377056 -165253094 + LTR37A LTR ERV1 15 45 -381 1016 257 5 0 chr5 34377056 34377278 -165252872 + MER58A DNA MER1_type 1 223 -1 1105 191 121 59 chr5 34377278 34377632 -165252518 + LTR37A LTR ERV1 45 426 0 1531 292 85 4 chr5 34377638 34378407 -165251743 - MER69 DNA AcHobo -1465 1061 134 29 47 0 0 chr5 34378640 34378683 -165251467 + AT_rich Low_complexity Low_complexity 1 43 0 794 246 66 36 chr5 34379537 34379842 -165250308 + HAL1 LINE L1 2 315 -2192 1586 193 0 24 chr5 34379938 34380233 -165249917 + AluJo SINE Alu 1 288 -24 314 338 44 44 chr5 34380691 34380895 -165249255 + L2 LINE L2 8 211 -3103 834 296 119 74 chr5 34380899 34381867 -165248283 + L2 LINE L2 2288 3313 0 25 65 0 0 chr5 34382854 34382900 -165247250 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr5 34383037 34383058 -165247092 + AT_rich Low_complexity Low_complexity 1 21 0 345 200 148 9 chr5 34383201 34383316 -165246834 + LTR16C LTR ERVL 337 467 -24 614 267 82 5 chr5 34383363 34383558 -165246592 + L1MEc LINE L1 32 241 -6155 248 185 19 0 chr5 34383710 34383764 -165246386 - L1MA9 LINE L1 -5 6307 6253 1290 71 0 30 chr5 34383765 34383934 -165246216 + AluY SINE Alu 1 164 -147 3772 222 31 60 chr5 34383937 34385205 -165244945 - L1ME2 LINE L1 -1271 5896 4683 303 67 0 0 chr5 34385205 34385250 -165244900 - MADE1 DNA Mariner -35 45 1 3772 222 31 60 chr5 34385250 34385702 -165244448 - L1ME2 LINE L1 -2484 4683 4220 7873 164 18 6 chr5 34385707 34388252 -165241898 + L1MA2 LINE L1 3729 6304 0 3157 278 64 15 chr5 34388272 34389905 -165240245 - L1ME2 LINE L1 -2953 4214 2483 2540 243 46 57 chr5 34389910 34389964 -165240186 - L1ME2 LINE L1 -4519 2579 2526 357 24 0 0 chr5 34389964 34390006 -165240144 + (TA)n Simple_repeat Simple_repeat 1 42 0 2540 243 46 57 chr5 34390006 34390026 -165240124 - L1ME2 LINE L1 -4572 2526 2507 2209 107 57 28 chr5 34390026 34390380 -165239770 - THE1B LTR MaLR 0 364 1 11460 94 11 4 chr5 34390380 34391949 -165238201 - THE1B-int LTR MaLR 0 1580 1 2227 128 48 31 chr5 34391949 34392307 -165237843 - THE1B LTR MaLR 0 364 1 2540 243 46 57 chr5 34392307 34393399 -165236751 - L1ME2 LINE L1 -4588 2510 1478 679 335 42 38 chr5 34393549 34393976 -165236174 - L1M3c LINE L1 -5710 431 3 282 206 0 0 chr5 34394624 34394687 -165235463 + (CA)n Simple_repeat Simple_repeat 2 64 0 22 0 0 0 chr5 34395794 34395816 -165234334 + AT_rich Low_complexity Low_complexity 1 22 0 2483 106 22 11 chr5 34395945 34396305 -165233845 - THE1B LTR MaLR 0 364 1 1588 190 54 12 chr5 34396662 34396993 -165233157 + MLT1A1 LTR MaLR 10 354 -11 225 65 0 0 chr5 34397190 34397221 -165232929 + (GA)n Simple_repeat Simple_repeat 2 32 0 2054 257 50 10 chr5 34398257 34398351 -165231799 - L1ME1 LINE L1 -4 6162 6073 2838 135 2 21 chr5 34398351 34398787 -165231363 - MSTA LTR MaLR 0 428 1 2054 257 50 10 chr5 34398787 34399271 -165230879 - L1ME1 LINE L1 -93 6073 5561 852 243 67 67 chr5 34399296 34399498 -165230652 + L1ME LINE L1 5008 5208 -958 4441 167 9 14 chr5 34399498 34400284 -165229866 + LTR39 LTR ERV1 2 783 0 852 243 67 67 chr5 34400284 34400605 -165229545 + L1ME LINE L1 5208 5529 -637 205 270 18 0 chr5 34400863 34400974 -165229176 + GA-rich Low_complexity Low_complexity 1 113 0 23 54 0 0 chr5 34401980 34402017 -165228133 + AT_rich Low_complexity Low_complexity 1 37 0 225 253 81 35 chr5 34402252 34402339 -165227811 + MIR SINE MIR 74 164 -98 851 143 0 0 chr5 34402940 34403066 -165227084 - FLAM_C SINE Alu -7 136 11 303 282 36 18 chr5 34404002 34404112 -165226038 + HAL1 LINE L1 961 1072 -1435 216 0 0 0 chr5 34404509 34404533 -165225617 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1664 196 0 14 chr5 34404536 34404822 -165225328 - AluJo SINE Alu -30 282 1 22 0 0 0 chr5 34405523 34405545 -165224605 + AT_rich Low_complexity Low_complexity 1 22 0 367 286 0 0 chr5 34406011 34406095 -165224055 + MLT1D LTR MaLR 8 91 -414 244 318 77 53 chr5 34406162 34406332 -165223818 + L2 LINE L2 3102 3275 -38 22 0 0 0 chr5 34406375 34406397 -165223753 + AT_rich Low_complexity Low_complexity 1 22 0 33 25 0 0 chr5 34406602 34406642 -165223508 + AT_rich Low_complexity Low_complexity 1 40 0 25 51 0 0 chr5 34406879 34406918 -165223232 + AT_rich Low_complexity Low_complexity 1 39 0 350 246 222 33 chr5 34406918 34407263 -165222887 + L1MC/D LINE L1 5322 5727 -480 880 108 24 12 chr5 34407263 34407430 -165222720 + GA-rich Low_complexity Low_complexity 3 171 0 211 306 16 0 chr5 34408611 34408673 -165221477 + MIR SINE MIR 78 140 -122 350 349 63 66 chr5 34408685 34409017 -165221133 - L2 LINE L2 -10 3262 2932 2281 110 0 13 chr5 34409186 34409495 -165220655 + AluSx SINE Alu 1 305 -7 285 292 172 82 chr5 34409719 34410010 -165220140 + L3 LINE CR1 1054 1370 -207 1160 333 62 27 chr5 34410143 34411068 -165219082 + L1MEc LINE L1 75 1031 -5365 8266 126 7 2 chr5 34411069 34412280 -165217870 + L1PA12 LINE L1 1493 2709 -4872 204 200 0 0 chr5 34412283 34412328 -165217822 + (TA)n Simple_repeat Simple_repeat 1 45 0 303 287 73 49 chr5 34412335 34412499 -165217651 + L1MC4 LINE L1 6579 6746 -1296 2403 232 21 10 chr5 34412503 34413110 -165217040 + L1PA11 LINE L1 2024 2637 -4212 1916 161 19 26 chr5 34413110 34413488 -165216662 + THE1C LTR MaLR 1 375 0 2931 104 109 8 chr5 34413488 34413957 -165216193 + THE1C-int LTR MaLR 1 516 -1064 5352 209 9 2 chr5 34413958 34415114 -165215036 + L1PA11 LINE L1 2821 3985 -2864 631 224 39 0 chr5 34415173 34415329 -165214821 - L1MA4 LINE L1 -4 6296 6135 6133 6 0 0 chr5 34415353 34416039 -165214111 - L1PA2 LINE L1 -1 6154 5469 715 145 48 7 chr5 34416039 34416184 -165213966 - L1MA4 LINE L1 -135 6165 6015 3031 262 67 58 chr5 34416188 34417590 -165212560 + L1M4 LINE L1 2245 3670 -2476 1879 199 52 40 chr5 34417590 34418087 -165212063 - MLT1D LTR MaLR 0 505 3 3031 262 67 58 chr5 34418087 34418532 -165211618 + L1M4 LINE L1 3670 4109 -2037 5945 150 25 0 chr5 34418537 34420334 -165209816 + L1PA11 LINE L1 5061 6876 -1 961 236 93 3 chr5 34420339 34420640 -165209510 + L1ME2 LINE L1 5828 6155 -9 2145 111 7 3 chr5 34420666 34420963 -165209187 + AluSq SINE Alu 1 298 -15 24 0 0 0 chr5 34421151 34421175 -165208975 + AT_rich Low_complexity Low_complexity 1 24 0 330 206 33 87 chr5 34421329 34421421 -165208729 - L1ME1 LINE L1 -68 6098 6012 359 23 0 0 chr5 34421439 34421482 -165208668 - MADE1 DNA Mariner -35 45 3 198 193 0 0 chr5 34421484 34421541 -165208609 + (TA)n Simple_repeat Simple_repeat 2 58 0 1043 311 102 78 chr5 34422348 34423092 -165207058 + L3 LINE CR1 472 1244 -333 953 324 30 34 chr5 34423092 34423558 -165206592 - LTR16B LTR ERVL 0 464 1 1043 311 102 78 chr5 34423558 34423736 -165206414 + L3 LINE CR1 1244 1416 -161 2147 97 0 7 chr5 34424205 34424515 -165205635 - L1P LINE L1 -1378 4768 4461 2580 82 6 6 chr5 34424515 34424866 -165205284 + L1PA8 LINE L1 5818 6171 -1 27 29 0 0 chr5 34426691 34426725 -165203425 + AT_rich Low_complexity Low_complexity 1 34 0 2348 94 0 16 chr5 34426945 34427252 -165202898 - AluSg SINE Alu -7 303 2 273 182 45 136 chr5 34427726 34427858 -165202292 + MLT1L LTR MaLR 217 336 -279 211 381 69 11 chr5 34428334 34428523 -165201627 + L2 LINE L2 2775 2974 -340 233 374 22 0 chr5 34428734 34428825 -165201325 + L2 LINE L2 3216 3308 -5 9472 194 21 16 chr5 34429595 34430428 -165199722 - L1PA15 LINE L1 -4 6161 5334 2192 113 0 0 chr5 34430428 34430721 -165199429 - AluSg SINE Alu -17 293 1 9472 194 21 16 chr5 34430721 34431428 -165198722 - L1PA15 LINE L1 -831 5334 4632 2051 144 5 44 chr5 34431428 34431817 -165198333 + THE1C LTR MaLR 2 375 0 9472 194 21 16 chr5 34431817 34433117 -165197033 - L1PA15 LINE L1 -1533 4632 3304 454 116 52 12 chr5 34433191 34433363 -165196787 + (TA)n Simple_repeat Simple_repeat 1 179 0 21 0 0 0 chr5 34433556 34433577 -165196573 + AT_rich Low_complexity Low_complexity 1 21 0 2382 85 3 0 chr5 34433903 34434197 -165195953 + AluSg SINE Alu 2 296 -14 1235 257 22 19 chr5 34435323 34435638 -165194512 - MLT1E LTR MaLR -69 524 209 384 190 0 0 chr5 34435644 34435723 -165194427 + CT-rich Low_complexity Low_complexity 1 79 0 498 239 44 9 chr5 34435728 34435841 -165194309 - MLT1E LTR MaLR -391 202 86 328 331 78 35 chr5 34436011 34436342 -165193808 - L2 LINE L2 -224 3048 2712 3012 195 39 60 chr5 34436364 34437114 -165193036 + L1MD2 LINE L1 5606 6339 -20 220 369 39 0 chr5 34437152 34437255 -165192895 - L2 LINE L2 -656 2658 2552 415 257 76 35 chr5 34438428 34438551 -165191599 + MER5B DNA MER1_type 1 134 -44 243 61 0 0 chr5 34438551 34438584 -165191566 + (TTA)n Simple_repeat Simple_repeat 1 33 0 415 257 76 35 chr5 34438584 34438631 -165191519 + MER5B DNA MER1_type 134 178 0 2389 85 0 0 chr5 34440420 34440715 -165189435 + AluSg SINE Alu 1 295 -15 515 252 67 7 chr5 34440975 34441222 -165188928 + L1ME LINE L1 5572 5781 -340 1654 182 7 3 chr5 34441358 34441649 -165188501 + AluJo SINE Alu 3 294 -18 5375 161 21 9 chr5 34442034 34443133 -165187017 + L1MA8 LINE L1 5101 6214 -77 212 303 232 26 chr5 34443155 34443422 -165186728 + L2 LINE L2 2447 2768 -546 674 177 0 48 chr5 34443811 34443935 -165186215 + FLAM_C SINE Alu 1 118 -25 239 148 45 0 chr5 34443937 34444025 -165186125 + (TA)n Simple_repeat Simple_repeat 1 92 0 335 208 0 78 chr5 34444028 34444105 -165186045 + FLAM SINE Alu 50 120 -13 1049 88 0 22 chr5 34444113 34444295 -165185855 + (TA)n Simple_repeat Simple_repeat 1 178 0 3490 82 4 0 chr5 34444756 34445234 -165184916 - L1PA7 LINE L1 0 6154 5675 30 0 0 0 chr5 34445288 34445318 -165184832 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr5 34445666 34445702 -165184448 + AT_rich Low_complexity Low_complexity 1 36 0 242 270 48 0 chr5 34446490 34446553 -165183597 - L2 LINE L2 -9 3304 3239 2284 114 7 0 chr5 34447031 34447339 -165182811 - AluSg SINE Alu 0 310 1 421 231 88 112 chr5 34448060 34448355 -165181795 - MLT1I LTR MaLR -93 316 29 28 29 0 0 chr5 34448539 34448574 -165181576 + AT_rich Low_complexity Low_complexity 1 35 0 373 360 70 19 chr5 34448940 34449154 -165180996 + L3 LINE CR1 953 1177 -400 393 22 0 0 chr5 34450049 34450095 -165180055 + (ATTAG)n Simple_repeat Simple_repeat 4 49 0 2161 41 60 0 chr5 34450229 34450531 -165179619 - AluY SINE Alu 0 318 1 272 324 150 45 chr5 34451011 34451441 -165178709 - L2 LINE L2 -673 2641 2258 2565 55 0 0 chr5 34451441 34451752 -165178398 + AluY SINE Alu 1 311 0 272 324 150 45 chr5 34451752 34452213 -165177937 - L2 LINE L2 -1056 2258 1656 2667 55 0 0 chr5 34452447 34452759 -165177391 + AluSp SINE Alu 1 312 -1 260 286 98 74 chr5 34453629 34454641 -165175509 + L1M4 LINE L1 2749 3735 -2411 623 226 0 0 chr5 34454641 34454798 -165175352 + FLAM_A SINE Alu 2 158 0 260 286 98 74 chr5 34454798 34455425 -165174725 + L1M4 LINE L1 3735 4346 -1800 1736 175 0 23 chr5 34455425 34455733 -165174417 + AluJb SINE Alu 1 301 -11 260 286 98 74 chr5 34455733 34456274 -165173876 + L1M4 LINE L1 4346 4983 -1163 2257 211 160 57 chr5 34456341 34456438 -165173712 + L1MDa LINE L1 2 88 -6452 2868 102 23 16 chr5 34456438 34456514 -165173636 + L1PB1 LINE L1 5706 5780 -371 954 27 41 0 chr5 34456514 34456660 -165173490 + (TAGA)n Simple_repeat Simple_repeat 1 152 0 2868 102 23 16 chr5 34456660 34457026 -165173124 + L1PB1 LINE L1 5780 6151 0 2257 211 160 57 chr5 34457026 34457721 -165172429 + L1MDa LINE L1 88 876 -5664 1261 209 141 15 chr5 34457759 34458213 -165171937 + L1MDa LINE L1 1210 1720 -4820 285 373 22 0 chr5 34458395 34458529 -165171621 - MLT1K LTR MaLR -295 293 157 463 299 133 50 chr5 34460515 34460793 -165169357 - L2 LINE L2 -1 3312 3012 339 342 52 19 chr5 34460987 34461142 -165169008 - MIR SINE MIR -79 183 24 696 189 41 18 chr5 34462029 34462065 -165168085 - MER3 DNA MER1_type -35 127 93 1653 176 13 20 chr5 34462065 34462366 -165167784 + AluJo SINE Alu 5 303 -9 696 189 41 18 chr5 34462366 34462498 -165167652 - MER3 DNA MER1_type -69 93 2 249 284 37 55 chr5 34462651 34462760 -165167390 - MIR3 SINE MIR -9 199 93 * 680 290 82 90 chr5 34462758 34463244 -165166906 - L2 LINE L2 -3 3310 2822 1083 246 98 89 chr5 34463244 34463826 -165166324 - MLT1E LTR MaLR -3 590 4 680 290 82 90 chr5 34463826 34463881 -165166269 - L2 LINE L2 -491 2822 2768 1721 189 16 22 chr5 34463881 34464193 -165165957 + AluJb SINE Alu 1 310 -2 680 290 82 90 chr5 34464193 34464487 -165165663 - L2 LINE L2 -545 2768 2472 213 121 0 0 chr5 34465716 34465749 -165164401 + (GA)n Simple_repeat Simple_repeat 2 34 0 1879 193 10 56 chr5 34465914 34466324 -165163826 - MSTD LTR MaLR 0 396 6 184 330 110 11 chr5 34466335 34466426 -165163724 - MIR SINE MIR -87 121 22 22 35 0 0 chr5 34468142 34468171 -165161979 + AT_rich Low_complexity Low_complexity 1 29 0 240 325 31 62 chr5 34469353 34469513 -165160637 + L2 LINE L2 2550 2704 -610 289 304 45 54 chr5 34469566 34469790 -165160360 + L2 LINE L2 2836 3057 -215 583 94 21 0 chr5 34469995 34470091 -165160059 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 897 118 7 78 chr5 34470995 34471148 -165159002 + AluSg/x SINE Alu 138 279 -31 387 316 22 0 chr5 34473957 34474093 -165156057 - MER69A DNA AcHobo 0 177 39 42667 36 1 1 chr5 34474179 34480335 -165149815 + L1PA3 LINE L1 4 6154 -1 28 71 0 0 chr5 34480427 34480483 -165149667 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr5 34480514 34480537 -165149613 + AT_rich Low_complexity Low_complexity 1 23 0 780 318 159 10 chr5 34481414 34481810 -165148340 + L2 LINE L2 803 1257 -2057 3389 306 87 32 chr5 34482227 34483398 -165146752 + L2 LINE L2 1269 2593 -720 1754 172 0 36 chr5 34483398 34483706 -165146444 + AluJb SINE Alu 1 297 -15 3389 306 87 32 chr5 34483706 34484458 -165145692 + L2 LINE L2 2593 3302 -11 221 215 46 0 chr5 34484465 34484530 -165145620 + (TTGGGG)n Simple_repeat Simple_repeat 5 72 0 24 53 0 0 chr5 34486992 34487030 -165143120 + AT_rich Low_complexity Low_complexity 1 38 0 2169 107 67 17 chr5 34487997 34488353 -165141797 + THE1C LTR MaLR 1 374 -1 231 146 0 0 chr5 34488809 34488850 -165141300 + (ATG)n Simple_repeat Simple_repeat 2 42 0 2148 136 36 28 chr5 34491986 34492347 -165137803 - THE1B LTR MaLR 0 364 1 2077 135 3 22 chr5 34493424 34493742 -165136408 - AluSx SINE Alu 0 312 1 1004 198 0 0 chr5 34494265 34494442 -165135708 + MER45A DNA AcHobo 2 178 0 1743 122 11 36 chr5 34494793 34495071 -165135079 + AluSg SINE Alu 30 300 -10 21 36 0 0 chr5 34496311 34496339 -165133811 + AT_rich Low_complexity Low_complexity 1 28 0 228 315 34 0 chr5 34497398 34497487 -165132663 + Charlie7 DNA MER1_type 5 96 -2516 1710 164 46 9 chr5 34498713 34499042 -165131108 + MER58B DNA MER1_type 1 341 0 290 371 88 34 chr5 34499758 34500052 -165130098 + L2 LINE L2 2943 3252 -20 201 39 0 0 chr5 34500292 34500318 -165129832 + (TC)n Simple_repeat Simple_repeat 2 27 0 360 59 0 0 chr5 34500441 34500492 -165129658 + (TTGG)n Simple_repeat Simple_repeat 2 52 0 2303 88 0 0 chr5 34500492 34500777 -165129373 - AluSq SINE Alu -28 285 1 218 222 0 0 chr5 34501241 34501286 -165128864 + (TTA)n Simple_repeat Simple_repeat 2 46 0 398 316 19 26 chr5 34501313 34501468 -165128682 - MIR SINE MIR -72 190 37 314 251 123 103 chr5 34501523 34501766 -165128384 - MIR SINE MIR -5 257 10 287 286 97 61 chr5 34501787 34501983 -165128167 + MIR SINE MIR 41 243 -19 1027 175 34 0 chr5 34502242 34502448 -165127702 + MER20 DNA MER1_type 7 219 0 203 218 119 89 chr5 34503074 34503175 -165126975 + MIR3 SINE MIR 101 204 -4 21 36 0 0 chr5 34503648 34503676 -165126474 + AT_rich Low_complexity Low_complexity 1 28 0 486 120 0 0 chr5 34503708 34503783 -165126367 + (CAGA)n Simple_repeat Simple_repeat 2 76 0 921 228 55 14 chr5 34503938 34504157 -165125993 + MIR SINE MIR 6 233 -29 483 60 0 0 chr5 34504538 34504605 -165125545 + (TC)n Simple_repeat Simple_repeat 2 68 0 22 0 0 0 chr5 34505212 34505234 -165124916 + AT_rich Low_complexity Low_complexity 1 22 0 206 344 44 0 chr5 34506117 34506207 -165123943 + MIR3 SINE MIR 109 202 -6 29 28 0 0 chr5 34506363 34506399 -165123751 + AT_rich Low_complexity Low_complexity 1 36 0 183 42 0 0 chr5 34509096 34509120 -165121030 + (AATTG)n Simple_repeat Simple_repeat 5 28 0 2325 64 0 3 chr5 34510318 34510613 -165119537 + AluY SINE Alu 1 294 -17 2217 80 37 0 chr5 34511321 34511620 -165118530 + AluSg SINE Alu 1 310 0 688 226 32 16 chr5 34511896 34512082 -165118068 - MER53 DNA DNA 0 189 1 619 209 43 66 chr5 34512398 34512507 -165117643 + MER96B DNA MER1_type? 1 104 -313 3909 142 29 18 chr5 34512507 34513188 -165116962 - L1MC1 LINE L1 -6 6327 5639 619 209 43 66 chr5 34513188 34513289 -165116861 + MER96B DNA MER1_type? 104 206 -211 288 337 24 0 chr5 34513549 34513632 -165116518 + MER91B DNA MER1_type 100 184 -6 3683 189 69 5 chr5 34513924 34514692 -165115458 - Tigger6a DNA MER2_type -265 818 2 477 0 0 0 chr5 34515908 34515961 -165114189 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 318 403 19 13 chr5 34516104 34516258 -165113892 + MIR3 SINE MIR 35 189 -19 352 301 111 13 chr5 34516483 34516636 -165113514 - MIR SINE MIR -6 256 89 562 259 7 22 chr5 34517589 34517728 -165112422 + MLT2F LTR ERVL 1 137 -526 623 185 7 75 chr5 34517740 34517886 -165112264 + MLT1E3 LTR MaLR 55 190 -434 325 258 49 28 chr5 34518016 34518211 -165111939 + MLT2F LTR ERVL 222 663 0 751 324 47 52 chr5 34518254 34518849 -165111301 + Charlie7 DNA MER1_type 21 612 -2000 206 125 0 25 chr5 34518858 34518898 -165111252 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 33 0 0 0 chr5 34518953 34518986 -165111164 + AT_rich Low_complexity Low_complexity 1 33 0 30 69 0 0 chr5 34519033 34519091 -165111059 + AT_rich Low_complexity Low_complexity 1 58 0 457 247 57 46 chr5 34519505 34519699 -165110451 + MLT1J LTR MaLR 309 504 -7 23 0 0 0 chr5 34519718 34519741 -165110409 + AT_rich Low_complexity Low_complexity 1 23 0 6708 16 3 0 chr5 34519820 34520593 -165109557 - L1PA3 LINE L1 0 6155 5381 341 288 77 86 chr5 34520598 34520831 -165109319 - L1MC4a LINE L1 -1983 5825 5595 209 356 171 0 chr5 34520947 34521093 -165109057 - L3 LINE CR1 -341 1236 1066 1031 209 15 0 chr5 34521113 34521309 -165108841 - MER58A DNA MER1_type -15 209 11 190 244 89 0 chr5 34521411 34521456 -165108694 + L2 LINE L2 3224 3272 0 408 271 54 30 chr5 34521854 34522020 -165108130 - MIR SINE MIR -17 245 76 638 264 113 43 chr5 34522133 34522579 -165107571 - MLT1G3 LTR MaLR -57 492 12 23 0 0 0 chr5 34522588 34522611 -165107539 + AT_rich Low_complexity Low_complexity 1 23 0 250 257 55 64 chr5 34522621 34522730 -165107420 - MLT1J2 LTR MaLR -59 391 284 198 222 69 28 chr5 34524021 34524093 -165106057 - L2 LINE L2 -676 2638 2564 363 60 0 0 chr5 34524481 34524531 -165105619 + (TG)n Simple_repeat Simple_repeat 1 50 0 2294 126 26 2 chr5 34525523 34526104 -165104046 - L1PA15 LINE L1 -1 6164 5504 1387 147 27 5 chr5 34526103 34526503 -165103647 + L1PA15 LINE L1 5082 5491 -674 * 4730 98 42 0 chr5 34526910 34527593 -165102557 - L1PA10 LINE L1 -12 6156 5445 440 216 9 18 chr5 34528008 34528119 -165102031 + L1MA10 LINE L1 6218 6327 -7 23 54 0 0 chr5 34528124 34528161 -165101989 + AT_rich Low_complexity Low_complexity 1 37 0 733 268 22 26 chr5 34529271 34529502 -165100648 - MIR SINE MIR -5 257 28 289 276 58 35 chr5 34529699 34529786 -165100364 - L2 LINE L2 -33 3239 3151 22 0 0 0 chr5 34530364 34530386 -165099764 + AT_rich Low_complexity Low_complexity 1 22 0 1322 174 80 11 chr5 34531728 34531992 -165098158 + AluJo SINE Alu 1 282 -30 480 111 0 0 chr5 34532013 34532085 -165098065 + (TA)n Simple_repeat Simple_repeat 1 72 0 297 352 78 17 chr5 34533023 34533202 -165096948 - MIR SINE MIR -16 246 57 403 240 89 113 chr5 34533273 34533565 -165096585 - LTR33A LTR ERVL -13 510 226 371 364 7 13 chr5 34534034 34534188 -165095962 - LTR33 LTR ERVL -339 182 30 529 300 87 41 chr5 34534738 34534888 -165095262 + L2 LINE L2 2602 2744 -528 2227 109 7 0 chr5 34534888 34535182 -165094968 + AluSx SINE Alu 1 296 -16 529 300 87 41 chr5 34535182 34535503 -165094647 + L2 LINE L2 2744 3086 -186 303 280 122 28 chr5 34535566 34535780 -165094370 - L2 LINE L2 -825 2489 2256 215 311 41 16 chr5 34535889 34536011 -165094139 + L2 LINE L2 2152 2276 -1038 205 213 213 0 chr5 34536907 34536968 -165093182 + L2 LINE L2 3231 3304 -9 4453 95 9 15 chr5 34538270 34538952 -165091198 + L1PB2 LINE L1 5474 6151 0 1159 235 71 10 chr5 34540044 34540338 -165089812 + L1MD2 LINE L1 5977 6288 -71 567 228 108 12 chr5 34540579 34540746 -165089404 + MER5A DNA MER1_type 7 189 0 22 0 0 0 chr5 34541659 34541681 -165088469 + AT_rich Low_complexity Low_complexity 1 22 0 2190 109 3 10 chr5 34541874 34542185 -165087965 + AluSc SINE Alu 1 309 0 21 71 0 0 chr5 34542413 34542455 -165087695 + AT_rich Low_complexity Low_complexity 1 42 0 279 281 184 18 chr5 34542832 34542946 -165087204 - L2 LINE L2 0 3313 3181 292 242 22 22 chr5 34542947 34543038 -165087112 + MER69A DNA AcHobo 3 93 -84 2865 186 13 45 chr5 34543044 34543646 -165086504 - MER6A DNA MER2_type -22 583 1 387 238 12 0 chr5 34543646 34543728 -165086422 + MER69A DNA AcHobo 92 174 -3 299 167 0 28 chr5 34544215 34544287 -165085863 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 2629 42 0 3 chr5 34544455 34544763 -165085387 + AluY SINE Alu 1 307 -4 213 39 0 0 chr5 34544980 34545006 -165085144 + (TG)n Simple_repeat Simple_repeat 2 27 0 1338 170 112 8 chr5 34545006 34545265 -165084885 - AluJb SINE Alu -26 286 1 2219 92 0 3 chr5 34545342 34545634 -165084516 + AluSc SINE Alu 1 291 -18 17620 109 36 22 chr5 34546271 34547655 -165082495 - Charlie3 DNA MER1_type -1 2705 1268 1559 114 5 0 chr5 34547655 34547866 -165082284 + AluSg SINE Alu 1 212 -98 17620 109 36 22 chr5 34547866 34549148 -165081002 - Charlie3 DNA MER1_type -1438 1268 4 313 40 100 0 chr5 34549916 34549966 -165080184 + AluY SINE Alu 245 299 -1 25 65 0 0 chr5 34550062 34550108 -165080042 + AT_rich Low_complexity Low_complexity 1 46 0 3115 166 6 36 chr5 34550639 34551273 -165078877 + L1MB2 LINE L1 5549 6163 -8 284 71 0 0 chr5 34551300 34551342 -165078808 - AluSq SINE Alu -2 300 259 1484 77 0 0 chr5 34551344 34551526 -165078624 - AluSq SINE Alu -131 182 1 22 0 0 0 chr5 34551526 34551548 -165078602 + AT_rich Low_complexity Low_complexity 1 22 0 606 293 112 5 chr5 34551837 34552052 -165078098 - MIR SINE MIR -2 260 23 314 303 46 7 chr5 34552613 34552765 -165077385 + MER103 DNA DNA 2 159 -7 1301 224 45 25 chr5 34553551 34553909 -165076241 + MLT1A1 LTR MaLR 1 365 0 232 256 134 12 chr5 34554019 34554101 -165076049 + MLT1J1 LTR MaLR 16 107 -339 280 250 188 0 chr5 34554394 34554490 -165075660 + MIR3 SINE MIR 47 160 -48 25 65 0 0 chr5 34555458 34555504 -165074646 + AT_rich Low_complexity Low_complexity 1 46 0 279 234 73 95 chr5 34556231 34556260 -165073890 + MLT1E1 LTR MaLR 1 29 -625 2165 132 10 44 chr5 34556260 34556647 -165073503 - THE1C LTR MaLR -1 374 1 279 234 73 95 chr5 34556647 34556754 -165073396 + MLT1E1 LTR MaLR 29 134 -520 510 225 12 62 chr5 34559765 34559867 -165070283 + L1MCa LINE L1 5 98 -6328 2251 89 0 36 chr5 34559867 34560170 -165069980 + AluSp SINE Alu 1 292 -21 510 225 12 62 chr5 34560170 34560227 -165069923 + L1MCa LINE L1 98 156 -6270 3802 204 29 35 chr5 34560256 34561802 -165068348 + L1MA8 LINE L1 4726 6266 -25 1471 212 22 19 chr5 34561837 34562196 -165067954 + L1MC1 LINE L1 5958 6317 -16 3523 211 32 22 chr5 34562204 34563833 -165066317 + L1PB1 LINE L1 4127 5766 -388 898 169 19 0 chr5 34563836 34563990 -165066160 + L1PB1 LINE L1 9 165 -7416 2504 58 0 3 chr5 34563993 34564302 -165065848 + AluY SINE Alu 1 308 -3 378 96 64 85 chr5 34564302 34564396 -165065754 + L1PB1 LINE L1 5736 5827 -324 4398 269 30 31 chr5 34564403 34565673 -165064477 + L1PB1 LINE L1 155 2478 -5106 590 219 12 69 chr5 34565885 34566022 -165064128 + L1PB1 LINE L1 2450 2564 -5020 2931 28 0 0 chr5 34566022 34566345 -165063805 + L1PA2 LINE L1 5828 6150 -5 590 219 12 69 chr5 34566345 34566466 -165063684 + L1PB1 LINE L1 2564 2690 -4894 13700 190 22 32 chr5 34566473 34567243 -165062907 + L1PB1 LINE L1 3950 4726 -2863 2346 75 14 3 chr5 34567243 34567538 -165062612 + AluSc SINE Alu 1 298 -11 13700 190 22 32 chr5 34567538 34569964 -165060186 + L1PB1 LINE L1 4726 7175 -414 2481 85 0 0 chr5 34569964 34570269 -165059881 + AluY SINE Alu 1 305 -6 13700 190 22 32 chr5 34570269 34570331 -165059819 + L1PB1 LINE L1 7175 7236 -353 279 0 0 0 chr5 34570331 34570362 -165059788 + (TG)n Simple_repeat Simple_repeat 2 32 0 13700 190 22 32 chr5 34570362 34570725 -165059425 + L1PB1 LINE L1 7236 7584 -5 2142 172 16 3 chr5 34570750 34571123 -165059027 + L1PB3 LINE L1 5769 6146 -8 22 56 0 0 chr5 34571126 34571162 -165058988 + AT_rich Low_complexity Low_complexity 1 36 0 346 189 0 0 chr5 34571307 34571381 -165058769 + L1PB3 LINE L1 6081 6154 0 334 281 59 22 chr5 34572072 34572207 -165057943 + MLT1E3 LTR MaLR 155 294 -330 2232 85 11 0 chr5 34573571 34573890 -165056260 - AluY SINE Alu 0 322 1 2238 79 11 0 chr5 34573892 34574172 -165055978 - AluSc SINE Alu -15 294 12 542 295 110 27 chr5 34574656 34575155 -165054995 + Charlie2a DNA MER1_type 1662 2280 -582 2054 141 13 0 chr5 34575574 34575879 -165054271 + AluSx SINE Alu 1 309 -3 495 166 0 35 chr5 34575882 34576051 -165054099 + G-rich Low_complexity Low_complexity 2 164 0 398 103 29 0 chr5 34576054 34576122 -165054028 + GA-rich Low_complexity Low_complexity 2 71 0 247 248 50 74 chr5 34579304 34579425 -165050725 - MLT1E1 LTR MaLR -335 289 172 347 242 55 23 chr5 34579456 34579584 -165050566 - MLT1E1 LTR MaLR -522 132 1 447 242 0 0 chr5 34580479 34580570 -165049580 + AluSg/x SINE Alu 202 292 -17 349 236 11 11 chr5 34580728 34580817 -165049333 + L1P5 LINE L1 81 169 -6694 3551 174 18 3 chr5 34580841 34581507 -165048643 + L1P5 LINE L1 1392 2067 -4796 10926 191 10 26 chr5 34581509 34583613 -165046537 + L1P5 LINE L1 3606 5650 -1217 2328 94 7 0 chr5 34583613 34583921 -165046229 - AluY SINE Alu -1 310 1 10926 191 10 26 chr5 34583921 34584583 -165045567 + L1P5 LINE L1 5650 6322 -545 1207 247 36 4 chr5 34585160 34585439 -165044711 + AluJb SINE Alu 1 288 -14 294 322 41 14 chr5 34586299 34586445 -165043705 + L1MCa LINE L1 6 155 -6271 4240 206 41 24 chr5 34586482 34587991 -165042159 + L1MA8 LINE L1 4731 6266 -25 1280 260 15 5 chr5 34588016 34588377 -165041773 + L1MC1 LINE L1 5960 6316 -17 215 146 62 0 chr5 34588538 34588586 -165041564 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 566 259 134 70 chr5 34589305 34589664 -165040486 + Charlie2a DNA MER1_type 1896 2277 -585 5198 103 13 3 chr5 34590354 34591059 -165039091 + L1PA8 LINE L1 5459 6170 -2 268 222 167 48 chr5 34593810 34593936 -165036214 - MLT1E3 LTR MaLR 0 624 484 394 308 8 0 chr5 34594155 34594285 -165035865 + Charlie2a DNA MER1_type 1896 2026 -836 482 244 89 69 chr5 34596181 34596542 -165033608 - MLT1E3 LTR MaLR 0 624 257 261 268 41 0 chr5 34596667 34596764 -165033386 - MLT1E3 LTR MaLR -547 107 7 1669 167 0 30 chr5 34596977 34597296 -165032854 - AluSx SINE Alu 0 312 3 807 148 8 0 chr5 34597520 34597648 -165032502 + AluSq/x SINE Alu 1 129 -184 272 195 153 17 chr5 34598008 34598126 -165032024 + Charlie7 DNA MER1_type 23 156 -2456 1591 195 3 0 chr5 34598192 34598474 -165031676 + AluJb SINE Alu 1 283 -29 22 0 0 0 chr5 34598881 34598903 -165031247 + AT_rich Low_complexity Low_complexity 1 22 0 3897 185 33 35 chr5 34599499 34600472 -165029678 + L1PB3 LINE L1 5157 6127 -27 356 214 34 11 chr5 34600675 34600764 -165029386 + L1PB3 LINE L1 6064 6154 0 2090 131 0 7 chr5 34601183 34601480 -165028670 - AluSc SINE Alu -14 295 1 1252 233 0 24 chr5 34603572 34603864 -165026286 + AluJb SINE Alu 5 289 -23 4007 203 27 51 chr5 34604729 34605998 -165024152 + L1MA8 LINE L1 5032 6265 -26 1194 270 13 18 chr5 34606017 34606402 -165023748 + L1MC1 LINE L1 5946 6328 -5 1092 280 10 14 chr5 34608461 34608750 -165021400 + AluJb SINE Alu 1 288 -14 296 356 27 0 chr5 34609618 34609764 -165020386 + L1MCa LINE L1 6 155 -6271 4588 198 38 24 chr5 34609801 34611311 -165018839 + L1MA8 LINE L1 4731 6266 -25 1336 269 12 7 chr5 34611337 34611728 -165018422 + L1MC1 LINE L1 5961 6343 -1 181 75 50 25 chr5 34611877 34611917 -165018233 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 4932 101 7 0 chr5 34613820 34614532 -165015618 + L1PA8 LINE L1 5456 6172 0 594 248 124 58 chr5 34617281 34617709 -165012441 - MLT1E3 LTR MaLR 0 624 169 293 276 38 0 chr5 34617762 34617867 -165012283 - MLT1E3 LTR MaLR -545 109 1 200 83 0 28 chr5 34618053 34618089 -165012061 + (TTTTA)n Simple_repeat Simple_repeat 4 38 0 1732 157 0 14 chr5 34618091 34618384 -165011766 - AluSx SINE Alu -21 291 3 431 319 6 0 chr5 34618676 34618836 -165011314 + Charlie2 DNA MER1_type 1911 2071 -791 1840 136 7 0 chr5 34619459 34619738 -165010412 + AluY SINE Alu 1 281 -30 4852 107 8 0 chr5 34619992 34620700 -165009450 + L1PA8 LINE L1 5459 6172 0 1568 177 4 4 chr5 34621602 34621862 -165008288 + AluSq SINE Alu 1 260 -53 1484 104 13 39 chr5 34622438 34622668 -165007482 + THE1B LTR MaLR 52 275 -89 518 156 33 0 chr5 34622706 34622796 -165007354 - Tigger3(Golem) DNA MER2_type -52 2977 2885 305 115 0 42 chr5 34622808 34622904 -165007246 + (TA)n Simple_repeat Simple_repeat 2 93 0 549 46 92 0 chr5 34622906 34622993 -165007157 - Tigger3(Golem) DNA MER2_type -164 2865 2771 486 201 27 134 chr5 34622990 34623053 -165007097 - Tigger3(Golem) DNA MER2_type -1089 142 103 * 2194 101 14 0 chr5 34623053 34623349 -165006801 - AluSp SINE Alu -13 300 1 486 201 27 134 chr5 34623349 34623434 -165006716 - Tigger3(Golem) DNA MER2_type -1128 103 10 236 139 0 0 chr5 34623461 34623497 -165006653 + MLT2C1 LTR ERVL 351 386 -11 188 340 100 10 chr5 34624775 34624875 -165005275 + MIR SINE MIR 32 140 -68 12283 176 35 67 chr5 34625582 34628705 -165001445 - L1PB1 LINE L1 -1 6866 3644 1325 108 98 0 chr5 34628705 34628909 -165001241 - AluSp SINE Alu -4 309 86 12283 176 35 67 chr5 34628909 34632639 -164997511 - L1PB1 LINE L1 -3223 3644 53 1269 157 4 4 chr5 34633900 34634148 -164996002 + L1MA4 LINE L1 6044 6291 -9 27 0 0 0 chr5 34634150 34634177 -164995973 + AT_rich Low_complexity Low_complexity 1 27 0 2855 202 53 90 chr5 34634594 34635504 -164994646 + L1MB8 LINE L1 5291 6166 -12 2031 177 51 17 chr5 34635585 34635997 -164994153 + MSTB LTR MaLR 1 426 0 187 120 20 20 chr5 34637118 34637168 -164992982 + (TA)n Simple_repeat Simple_repeat 1 50 0 1099 318 6 8 chr5 34638561 34638919 -164991231 + L1MCb LINE L1 7 363 -5682 2237 66 15 0 chr5 34639477 34639749 -164990401 + AluSq SINE Alu 38 313 0 876 206 4 79 chr5 34641144 34641314 -164988836 + MER20 DNA MER1_type 3 153 -66 2257 196 75 14 chr5 34641314 34641757 -164988393 + MER70A LTR ERVL 3 472 0 876 206 4 79 chr5 34641757 34641814 -164988336 + MER20 DNA MER1_type 153 213 -6 269 346 74 29 chr5 34642191 34642503 -164987647 + L2 LINE L2 1836 2161 -1153 298 342 17 8 chr5 34642508 34642625 -164987525 + L2 LINE L2 2303 2420 -894 851 295 85 19 chr5 34642640 34643053 -164987097 - MLT1J LTR MaLR 0 511 72 250 243 68 0 chr5 34644209 34644283 -164985867 - MIR SINE MIR 0 262 184 2116 124 26 34 chr5 34644529 34644907 -164985243 - THE1C LTR MaLR 0 375 1 201 121 0 0 chr5 34645051 34645084 -164985066 + (TC)n Simple_repeat Simple_repeat 1 33 0 325 360 86 8 chr5 34645253 34645614 -164984536 + L2 LINE L2 1599 1987 -1327 438 20 0 0 chr5 34645809 34645860 -164984290 + (TA)n Simple_repeat Simple_repeat 2 52 0 379 275 100 0 chr5 34646415 34646615 -164983535 - HAL1 LINE L1 -1175 1332 1113 716 168 15 0 chr5 34646615 34646746 -164983404 - MLT1D LTR MaLR -2 503 371 2602 217 42 109 chr5 34646746 34647803 -164982347 - MER52A LTR ERV1 0 1755 734 267 120 80 0 chr5 34647804 34647854 -164982296 - MLT2A1 LTR ERVL 0 453 400 3074 81 5 5 chr5 34647898 34648307 -164981843 - MLT2A1 LTR ERVL -35 409 1 615 291 0 0 chr5 34648336 34648477 -164981673 - MER52A LTR ERV1 -955 800 660 942 234 63 79 chr5 34648479 34648859 -164981291 - MLT1D LTR MaLR -131 374 1 201 74 0 0 chr5 34648877 34648904 -164981246 + (T)n Simple_repeat Simple_repeat 1 27 0 256 258 36 82 chr5 34648922 34649116 -164981034 - HAL1 LINE L1 -1454 1053 869 1920 158 35 30 chr5 34649503 34649876 -164980274 - THE1C LTR MaLR 0 375 1 340 302 60 37 chr5 34651567 34651856 -164978294 - MLT1I LTR MaLR -19 390 59 195 348 33 22 chr5 34651952 34652044 -164978106 - MIR SINE MIR -151 111 19 26 30 0 0 chr5 34652792 34652825 -164977325 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr5 34653261 34653290 -164976860 + AT_rich Low_complexity Low_complexity 1 29 0 24 91 0 0 chr5 34653365 34653431 -164976719 + AT_rich Low_complexity Low_complexity 1 66 0 23 0 0 0 chr5 34653444 34653467 -164976683 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 34654188 34654210 -164975940 + AT_rich Low_complexity Low_complexity 1 22 0 2512 58 0 0 chr5 34654518 34654812 -164975338 + AluY SINE Alu 3 296 -15 256 322 96 20 chr5 34654829 34654975 -164975175 + MER5A DNA MER1_type 1 157 -32 22 35 0 0 chr5 34655133 34655162 -164974988 + AT_rich Low_complexity Low_complexity 1 29 0 622 277 30 15 chr5 34655679 34655881 -164974269 - MIR SINE MIR -37 225 21 743 218 20 0 chr5 34656739 34656886 -164973264 - MLT1A1 LTR MaLR 0 365 216 1361 194 106 27 chr5 34656920 34657249 -164972901 - MLT1A2 LTR MaLR -19 355 1 291 224 0 45 chr5 34657423 34657490 -164972660 - L2 LINE L2 0 3313 3250 180 254 83 94 chr5 34657952 34658133 -164972017 - L2 LINE L2 -22 3291 3113 1476 214 127 24 chr5 34659207 34659586 -164970564 + MER47B DNA MER2_type 1 418 0 2333 87 0 6 chr5 34659612 34659923 -164970227 - AluSc SINE Alu 0 309 1 796 169 0 92 chr5 34660082 34660266 -164969884 + FRAM SINE Alu 3 169 -7 34 24 0 0 chr5 34660966 34661007 -164969143 + AT_rich Low_complexity Low_complexity 1 41 0 506 276 80 42 chr5 34661209 34661448 -164968702 + MIR SINE MIR 15 262 0 6067 89 29 1 chr5 34661774 34662833 -164967317 + L1PA14 LINE L1 5067 6150 -11 510 17 0 0 chr5 34662901 34662960 -164967190 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 2047 125 0 0 chr5 34662962 34663241 -164966909 - AluSg SINE Alu -31 279 1 331 151 0 19 chr5 34663194 34663266 -164966884 - Alu SINE Alu -255 47 1 3300 103 2 16 chr5 34663285 34663782 -164966368 + L1PB1 LINE L1 5662 6151 0 1727 176 10 13 chr5 34664695 34665001 -164965149 - AluJb SINE Alu -2 310 6 1507 238 75 55 chr5 34665032 34665275 -164964875 - L1ME1 LINE L1 -76 6090 5853 2066 120 7 0 chr5 34665275 34665566 -164964584 - AluSc SINE Alu -16 293 1 1507 238 75 55 chr5 34665566 34665885 -164964265 - L1ME1 LINE L1 -313 5853 5517 321 312 37 28 chr5 34666360 34666469 -164963681 + HAL1 LINE L1 824 933 -1574 735 233 19 0 chr5 34666469 34666628 -164963522 - MLT1E1 LTR MaLR -1 653 492 1022 161 0 0 chr5 34666632 34666787 -164963363 + FRAM SINE Alu 4 158 -18 508 301 109 6 chr5 34666787 34666943 -164963207 - MLT1E1 LTR MaLR -154 439 268 1535 129 41 110 chr5 34666954 34667272 -164962878 - MER1B DNA MER1_type 0 339 44 248 269 65 21 chr5 34667319 34667412 -164962738 - MLT1E1 LTR MaLR -358 235 139 322 264 41 41 chr5 34667482 34667603 -164962547 + HAL1 LINE L1 1832 1952 -555 324 304 47 32 chr5 34667671 34667924 -164962226 + HAL1 LINE L1 2138 2394 -113 26 0 0 0 chr5 34667939 34667965 -164962185 + AT_rich Low_complexity Low_complexity 1 26 0 26 0 0 0 chr5 34668095 34668121 -164962029 + AT_rich Low_complexity Low_complexity 1 26 0 296 307 69 16 chr5 34668367 34668556 -164961594 - MIR SINE MIR -15 247 49 267 114 0 0 chr5 34669455 34669499 -164960651 + (TG)n Simple_repeat Simple_repeat 2 45 0 266 67 22 0 chr5 34669841 34669886 -164960264 + (TG)n Simple_repeat Simple_repeat 2 47 0 28 0 0 0 chr5 34670653 34670681 -164959469 + AT_rich Low_complexity Low_complexity 1 28 0 228 214 0 0 chr5 34670792 34670848 -164959302 + (TG)n Simple_repeat Simple_repeat 2 57 0 190 256 35 93 chr5 34671438 34671524 -164958626 - MIR SINE MIR -54 208 128 30 27 0 0 chr5 34674021 34674058 -164956092 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr5 34674284 34674311 -164955839 + AT_rich Low_complexity Low_complexity 1 27 0 1518 207 0 0 chr5 34674311 34674582 -164955568 - AluJb SINE Alu -18 294 24 25 31 0 0 chr5 34674592 34674624 -164955526 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 34675118 34675139 -164955011 + (TAA)n Simple_repeat Simple_repeat 1 21 0 266 241 247 13 chr5 34675142 34675300 -164954850 - MIR SINE MIR -2 260 66 22 35 0 0 chr5 34675319 34675348 -164954802 + AT_rich Low_complexity Low_complexity 1 29 0 865 163 0 0 chr5 34675359 34675500 -164954650 - AluJb SINE Alu -14 298 158 1985 249 50 23 chr5 34675759 34676378 -164953772 - L1ME2 LINE L1 -10 6154 5519 28 29 0 0 chr5 34676659 34676694 -164953456 + AT_rich Low_complexity Low_complexity 1 35 0 5555 149 29 22 chr5 34677382 34678629 -164951521 - L1MA7 LINE L1 -2 6289 5024 7721 188 30 58 chr5 34678733 34680482 -164949668 - L1ME2 LINE L1 -836 5310 3619 751 174 0 0 chr5 34680482 34680603 -164949547 - FLAM_C SINE Alu -22 121 1 7721 188 30 58 chr5 34680603 34680958 -164949192 - L1ME2 LINE L1 -2527 3619 3255 1563 270 35 53 chr5 34680955 34681704 -164948446 - L1M3de LINE L1 -5581 1072 1 * 22 0 0 0 chr5 34681759 34681781 -164948369 + AT_rich Low_complexity Low_complexity 1 22 0 1341 293 116 29 chr5 34682100 34682939 -164947211 - L2 LINE L2 0 3313 2393 218 376 81 16 chr5 34682937 34683123 -164947027 + L2 LINE L2 2556 2753 -561 * 712 200 0 23 chr5 34683418 34683548 -164946602 + FLAM_C SINE Alu 2 128 -5 1096 266 95 19 chr5 34683730 34684109 -164946041 - MLT1F LTR MaLR 0 542 135 234 348 0 42 chr5 34684175 34684293 -164945857 - MLT1F LTR MaLR -429 113 1 295 281 98 8 chr5 34684294 34684439 -164945711 - MLT1F-int LTR MaLR -1 1734 1214 234 148 0 0 chr5 34684591 34684645 -164945505 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2167 81 19 0 chr5 34685144 34685454 -164944696 - L1PA7 LINE L1 0 6154 5839 5706 70 1 1 chr5 34685454 34686223 -164943927 - L1P LINE L1 -2476 3670 2902 4988 174 36 42 chr5 34686222 34687283 -164942867 + L1P LINE L1 11 1064 -5082 * 366 61 0 0 chr5 34687486 34687535 -164942615 + (TG)n Simple_repeat Simple_repeat 1 49 0 202 220 0 20 chr5 34688241 34688291 -164941859 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 202 220 0 20 chr5 34688890 34688940 -164941210 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 24 0 0 0 chr5 34689160 34689184 -164940966 + AT_rich Low_complexity Low_complexity 1 24 0 2399 76 0 3 chr5 34689249 34689550 -164940600 - AluY SINE Alu -11 300 1 211 260 94 10 chr5 34690083 34690179 -164939971 - MIR SINE MIR -3 259 156 188 316 84 11 chr5 34690229 34690324 -164939826 - MIR SINE MIR -57 151 50 1226 259 86 40 chr5 34690343 34690953 -164939197 - MER69 DNA AcHobo -1 2525 1944 183 42 0 0 chr5 34690953 34690977 -164939173 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1226 259 86 40 chr5 34690977 34691218 -164938932 - MER69 DNA AcHobo -582 1944 294 438 289 9 0 chr5 34691220 34691334 -164938816 - MER94 DNA DNA -2 132 18 31 26 0 0 chr5 34692396 34692434 -164937716 + AT_rich Low_complexity Low_complexity 1 38 0 282 283 33 33 chr5 34692521 34692641 -164937509 - HAL1 LINE L1 -138 2369 2250 481 30 30 0 chr5 34693346 34693413 -164936737 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 465 83 111 0 chr5 34693738 34693810 -164936340 - MADE1 DNA Mariner 0 80 1 1710 279 108 30 chr5 34693841 34695048 -164935102 + L1MC4 LINE L1 6483 7900 -142 315 85 0 0 chr5 34695051 34695098 -164935052 + (TG)n Simple_repeat Simple_repeat 2 48 0 679 253 95 63 chr5 34695098 34695668 -164934482 - L1MEc LINE L1 -2700 3515 2928 2493 59 0 0 chr5 34695671 34695974 -164934176 - AluY SINE Alu -8 303 1 289 256 37 0 chr5 34696019 34696101 -164934049 - L1MEc LINE L1 -3427 2788 2704 831 253 12 52 chr5 34696172 34696516 -164933634 - L1MEc LINE L1 -3652 2563 2234 336 333 73 38 chr5 34696540 34696801 -164933349 - L1MEc LINE L1 -5340 1056 787 892 330 44 25 chr5 34697828 34698189 -164931961 - MLT1J LTR MaLR -143 368 1 747 257 41 28 chr5 34699535 34699753 -164930397 - MIR SINE MIR -21 241 21 1922 145 30 36 chr5 34701429 34701794 -164928356 + THE1B LTR MaLR 1 363 -1 1776 159 32 29 chr5 34702129 34702438 -164927712 + AluSx SINE Alu 3 312 0 1048 226 23 0 chr5 34703562 34703779 -164926371 + AluJo SINE Alu 71 292 -20 2212 100 7 7 chr5 34703838 34704138 -164926012 - AluSc SINE Alu -9 300 1 24 53 0 0 chr5 34704583 34704621 -164925529 + AT_rich Low_complexity Low_complexity 1 38 0 207 47 0 139 chr5 34704831 34704874 -164925276 + (A)n Simple_repeat Simple_repeat 1 37 0 348 278 11 11 chr5 34705459 34705549 -164924601 + MIR SINE MIR 3 92 -170 491 298 60 0 chr5 34705657 34705808 -164924342 + MIR SINE MIR 86 245 -17 293 317 96 36 chr5 34705869 34706219 -164923931 - L1MC/D LINE L1 -461 5660 5444 324 136 0 17 chr5 34706234 34706293 -164923857 - MLT1E2 LTR MaLR -2 622 565 204 40 0 0 chr5 34706338 34706363 -164923787 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 1114 251 157 112 chr5 34706363 34706868 -164923282 - MLT1E2 LTR MaLR -53 601 9 382 307 17 22 chr5 34706873 34707052 -164923098 - L1MC/D LINE L1 -686 5435 5258 5604 118 3 7 chr5 34707113 34707979 -164922171 - L1PB1 LINE L1 -2 6852 5990 669 117 29 0 chr5 34707962 34708065 -164922085 - L1PB1 LINE L1 -4466 2383 2278 * 22 0 0 0 chr5 34708916 34708938 -164921212 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr5 34710267 34710291 -164919859 + AT_rich Low_complexity Low_complexity 1 24 0 283 325 12 0 chr5 34710305 34710385 -164919765 + MIR3 SINE MIR 89 169 -39 2142 114 7 0 chr5 34710650 34710947 -164919203 + AluSp SINE Alu 1 299 -14 3574 30 5 0 chr5 34711340 34711769 -164918381 - L1PA4 LINE L1 -2 6153 5723 339 89 0 0 chr5 34711769 34711814 -164918336 + L1PA4 LINE L1 5681 5725 -430 23 0 0 0 chr5 34711819 34711842 -164918308 + AT_rich Low_complexity Low_complexity 1 23 0 295 26 0 0 chr5 34711842 34711880 -164918270 + L1PA3 LINE L1 5866 5903 -252 1596 102 0 31 chr5 34711900 34712156 -164917994 - L1PA13 LINE L1 -19 6144 5897 1888 150 7 10 chr5 34712246 34712552 -164917598 - AluSx SINE Alu -7 305 1 568 223 42 24 chr5 34714208 34714374 -164915776 - LTR33 LTR ERVL -18 503 335 377 273 20 33 chr5 34714472 34714622 -164915528 - LTR33 LTR ERVL -373 148 1 777 241 84 33 chr5 34714741 34714975 -164915175 - L1MA9 LINE L1 -38 6274 6053 2635 17 0 0 chr5 34714975 34715268 -164914882 + AluYa5 SINE Alu 1 293 -18 777 241 84 33 chr5 34715268 34715398 -164914752 - L1MA9 LINE L1 -259 6053 5802 1868 153 123 50 chr5 34715729 34716128 -164914022 + MSTA LTR MaLR 1 428 0 545 315 113 56 chr5 34716463 34717073 -164913077 + L1ME4a LINE L1 5320 5964 -157 382 344 114 13 chr5 34717979 34718206 -164911944 - MIR SINE MIR 0 262 13 3214 160 8 4 chr5 34718308 34718833 -164911317 + MER1A DNA MER1_type 1 527 0 198 0 0 0 chr5 34719269 34719291 -164910859 + (T)n Simple_repeat Simple_repeat 1 22 0 186 150 0 0 chr5 34720514 34720554 -164909596 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 4898 129 36 4 chr5 34720569 34721354 -164908796 - L1PA16 LINE L1 -5 6161 5352 7645 26 0 0 chr5 34721366 34722440 -164907710 - L1PA3 LINE L1 -10 6145 5072 2423 246 108 10 chr5 34722943 34723806 -164906344 + L1M4 LINE L1 4110 5056 -1090 636 238 110 0 chr5 34723816 34723980 -164906170 + MER58A DNA MER1_type 43 224 0 197 128 0 26 chr5 34724498 34724537 -164905613 + (TTCCC)n Simple_repeat Simple_repeat 2 39 0 381 318 110 42 chr5 34724659 34725014 -164905136 - L1M4 LINE L1 -2167 3979 3601 28 29 0 0 chr5 34725152 34725187 -164904963 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 34726076 34726098 -164904052 + AT_rich Low_complexity Low_complexity 1 22 0 2273 78 3 3 chr5 34726290 34726585 -164903565 - AluY SINE Alu -16 295 1 203 175 0 0 chr5 34726783 34726823 -164903327 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2331 54 11 0 chr5 34727227 34727561 -164902589 - AluY SINE Alu 0 337 1 2690 130 23 23 chr5 34727786 34728218 -164901932 - Tigger2a DNA MER2_type 0 434 3 574 303 19 6 chr5 34728231 34728393 -164901757 + MER91A DNA MER1_type 10 173 -23 306 182 52 13 chr5 34728738 34728815 -164901335 - MER116 DNA Mariner 0 80 1 278 151 0 49 chr5 34729221 34729282 -164900868 - MLT1B LTR MaLR -7 460 301 248 254 18 0 chr5 34729833 34729905 -164900245 + MIR SINE MIR 74 147 -61 693 197 22 60 chr5 34732189 34732372 -164897778 + LTR40a LTR ERVL 1 233 -286 198 103 0 0 chr5 34732376 34732405 -164897745 + (TG)n Simple_repeat Simple_repeat 1 29 0 309 262 128 103 chr5 34733617 34734189 -164895961 + HAL1 LINE L1 1291 1876 -631 2007 92 26 4 chr5 34735107 34735380 -164894770 + AluSg SINE Alu 1 279 -31 2627 45 0 3 chr5 34735857 34736167 -164893983 - AluY SINE Alu -2 309 1 512 146 100 77 chr5 34736997 34737127 -164893023 + MER20 DNA MER1_type 1 133 -86 315 150 0 0 chr5 34737755 34737815 -164892335 + (GA)n Simple_repeat Simple_repeat 1 60 0 251 277 79 40 chr5 34737847 34737948 -164892202 - LTR67 LTR ERVL -339 218 114 391 273 25 12 chr5 34740115 34740276 -164889874 + (TA)n Simple_repeat Simple_repeat 1 163 0 357 92 62 46 chr5 34740553 34740618 -164889532 + MADE1 DNA Mariner 13 78 -2 333 326 41 20 chr5 34740928 34741075 -164889075 + L2 LINE L2 2173 2322 -992 2190 107 13 0 chr5 34741206 34741515 -164888635 + AluSp SINE Alu 1 313 0 683 146 73 15 chr5 34741654 34741791 -164888359 + MLT1B LTR MaLR 13 157 -233 7331 26 0 0 chr5 34741796 34743041 -164887109 - L1PA4 LINE L1 0 6155 4913 2936 32 14 0 chr5 34743042 34743411 -164886739 + L1P LINE L1 2706 3079 -3067 2333 107 7 0 chr5 34746381 34746691 -164883459 - AluSq SINE Alu -1 312 1 426 78 0 0 chr5 34749455 34749519 -164880631 + Alu SINE Alu 244 307 -4 2290 82 10 3 chr5 34749530 34749822 -164880328 + AluSp SINE Alu 1 294 -19 2446 124 5 19 chr5 34750667 34751045 -164879105 - THE1C LTR MaLR 0 375 3 356 238 8 0 chr5 34751330 34751456 -164878694 + (TA)n Simple_repeat Simple_repeat 2 128 0 27 29 0 0 chr5 34751576 34751610 -164878540 + AT_rich Low_complexity Low_complexity 1 34 0 777 159 13 70 chr5 34752077 34752105 -164878045 + FAM SINE Alu 26 54 -267 2500 134 0 3 chr5 34752105 34752470 -164877680 - THE1B LTR MaLR 0 364 1 777 159 13 70 chr5 34752470 34752598 -164877552 + FAM SINE Alu 54 173 -12 335 298 12 0 chr5 34753658 34753742 -164876408 - L2 LINE L2 -4 3268 3184 474 232 45 18 chr5 34753968 34754080 -164876070 + L1MDa LINE L1 11 125 -6415 279 146 0 0 chr5 34754094 34754142 -164876008 - L1MDa LINE L1 -6452 88 41 1216 231 58 36 chr5 34754166 34754368 -164875782 + L1MDa LINE L1 115 330 -6210 2444 120 19 6 chr5 34754368 34754727 -164875423 + THE1B LTR MaLR 1 364 0 1216 231 58 36 chr5 34754727 34754884 -164875266 + L1MDa LINE L1 330 482 -6058 3239 96 0 13 chr5 34755669 34756126 -164874024 + L1PA8A LINE L1 5669 6119 -12 353 238 0 0 chr5 34756165 34756245 -164873905 - L1M4 LINE L1 -1983 4163 4084 255 263 9 35 chr5 34756239 34756353 -164873797 - L1MEc LINE L1 -4665 2457 2347 * 1124 281 36 60 chr5 34756897 34757177 -164872973 - L1MEc LINE L1 -5841 582 320 1004 237 68 78 chr5 34757177 34757649 -164872501 + MLT1C LTR MaLR 1 467 0 1124 281 36 60 chr5 34757649 34757902 -164872248 - L1MEc LINE L1 -6103 320 62 21 0 0 0 chr5 34758949 34758970 -164871180 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 34759794 34759823 -164870327 + AT_rich Low_complexity Low_complexity 1 29 0 344 184 28 9 chr5 34760842 34760951 -164869199 + (TA)n Simple_repeat Simple_repeat 2 112 0 1131 294 10 35 chr5 34762053 34762454 -164867696 + LTR16A LTR ERVL 27 417 -33 944 343 70 18 chr5 34762874 34763431 -164866719 + HERV16 LTR ERVL 809 1394 -3602 1414 300 46 18 chr5 34763435 34763932 -164866218 + HERV16 LTR ERVL 1682 2192 -2804 230 285 29 80 chr5 34764428 34764565 -164865585 + MLT1K LTR MaLR 422 551 -37 207 0 0 0 chr5 34765008 34765031 -164865119 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 809 175 23 41 chr5 34765670 34765841 -164864309 + MER58A DNA MER1_type 26 193 -31 2433 63 7 0 chr5 34765841 34766141 -164864009 + AluY SINE Alu 1 302 -9 663 279 44 63 chr5 34767000 34767315 -164862835 - L2 LINE L2 0 3313 3005 270 254 45 0 chr5 34768732 34768799 -164861351 - L2 LINE L2 0 3313 3244 21 36 0 0 chr5 34768861 34768889 -164861261 + AT_rich Low_complexity Low_complexity 1 28 0 1452 224 37 8 chr5 34769535 34770025 -164860125 - L1M4c LINE L1 -2922 3722 3219 3484 136 9 2 chr5 34770041 34770599 -164859551 - L1PA10 LINE L1 -11 6157 5596 1742 189 6 9 chr5 34770600 34770917 -164859233 - L1P3 LINE L1 -5557 318 3 1735 149 45 36 chr5 34771100 34771408 -164858742 + AluSx SINE Alu 1 311 -1 1646 230 26 33 chr5 34771410 34771423 -164858727 - L1M4c LINE L1 -3454 3190 3178 2516 111 8 0 chr5 34771423 34771775 -164858375 - THE1A LTR MaLR 0 355 1 1646 230 26 33 chr5 34771775 34772235 -164857915 - L1M4c LINE L1 -3466 3178 2719 2131 128 3 0 chr5 34772235 34772532 -164857618 - AluSx SINE Alu -14 298 1 1646 230 26 33 chr5 34772532 34772631 -164857519 - L1M4c LINE L1 -3925 2719 2621 2150 150 8 33 chr5 34772633 34773000 -164857150 - THE1B LTR MaLR 0 364 7 9313 146 41 5 chr5 34773005 34774529 -164855621 - THE1B-int LTR MaLR 0 1580 1 2365 139 14 0 chr5 34774529 34774888 -164855262 - THE1B LTR MaLR 0 364 1 3709 262 64 43 chr5 34774902 34777202 -164852948 - L1M4c LINE L1 -4176 2649 152 472 162 34 51 chr5 34777229 34777283 -164852867 + L1PA16 LINE L1 6040 6093 -73 2277 115 47 16 chr5 34777283 34777647 -164852503 + THE1C LTR MaLR 1 375 0 472 162 34 51 chr5 34777647 34777709 -164852441 + L1PA16 LINE L1 6093 6154 -12 580 161 45 0 chr5 34777713 34777825 -164852325 + L1PA16 LINE L1 17 133 -7432 * 7583 159 38 0 chr5 34777822 34779048 -164851102 + L1PA16 LINE L1 1099 2371 -5194 4615 139 17 4 chr5 34779042 34779802 -164850348 + L1PA16 LINE L1 6681 7450 -135 * 1004 189 26 0 chr5 34779802 34779992 -164850158 + L1PA16 LINE L1 5971 6165 -1 416 170 0 85 chr5 34780000 34780094 -164850056 + LTR29 LTR ERV1 465 550 -72 1641 102 23 8 chr5 34780519 34780783 -164849367 - L1PA8A LINE L1 -513 5618 5351 2057 263 42 40 chr5 34780841 34781353 -164848797 + L1MC/D LINE L1 4264 4774 -1576 2787 3 0 3 chr5 34781353 34781656 -164848494 + AluYa5 SINE Alu 1 302 -9 2057 263 42 40 chr5 34781656 34782472 -164847678 + L1MC/D LINE L1 4774 5607 -743 23 0 0 0 chr5 34782479 34782502 -164847648 + AT_rich Low_complexity Low_complexity 1 23 0 7818 200 67 48 chr5 34782502 34786072 -164844078 - L1MA7 LINE L1 -2 6493 2229 2380 83 0 3 chr5 34786072 34786373 -164843777 - AluSq SINE Alu -13 300 1 7818 200 67 48 chr5 34786373 34786598 -164843552 - L1MA7 LINE L1 -4266 2229 2010 2131 189 44 7 chr5 34786701 34787109 -164843041 - MSTB1 LTR MaLR 0 432 10 2249 280 33 54 chr5 34787142 34788589 -164841561 - L1MA7 LINE L1 -4246 2105 819 486 298 35 6 chr5 34788782 34788953 -164841197 - L1MA7 LINE L1 -6105 176 1 1648 104 4 24 chr5 34789740 34789989 -164840161 - L1PA11 LINE L1 0 6174 5931 2161 113 3 0 chr5 34790290 34790581 -164839569 - AluSg SINE Alu -18 292 1 8302 195 12 18 chr5 34793325 34794940 -164835210 + MST-int LTR MaLR 1 1605 -46 474 140 43 11 chr5 34794941 34795034 -164835116 + MER4A LTR ERV1 3 98 -566 1620 146 165 76 chr5 34795035 34795405 -164834745 + MER4A LTR ERV1 262 664 0 5286 137 74 55 chr5 34795408 34796067 -164834083 + MER4A-int LTR ERV1 1 646 -4369 180 0 0 0 chr5 34796067 34796087 -164834063 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 417 20 0 0 chr5 34796086 34796136 -164834014 + (CA)n Simple_repeat Simple_repeat 1 50 0 5286 137 74 55 chr5 34796087 34797843 -164832307 + MER4A-int LTR ERV1 646 1362 -3653 1034 183 152 5 chr5 34797843 34798067 -164832083 - LTR8 LTR ERV1 -434 257 1 296 121 138 0 chr5 34798071 34798129 -164832021 + PABL_A-int LTR ERV1 3596 3661 -1354 1201 161 68 21 chr5 34798135 34798378 -164831772 + MSTB1 LTR MaLR 174 372 -3 189 195 0 0 chr5 34798600 34798641 -164831509 + (CATA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr5 34798989 34799010 -164831140 + AT_rich Low_complexity Low_complexity 1 21 0 197 223 0 0 chr5 34799776 34799829 -164830321 + MIR SINE MIR 99 151 -57 6554 64 10 0 chr5 34799976 34800322 -164829828 - L1PA7 LINE L1 0 6154 5813 2925 13 0 0 chr5 34800322 34800640 -164829510 - AluYb8 SINE Alu 0 318 1 6554 64 10 0 chr5 34800640 34801889 -164828261 - L1PA7 LINE L1 -341 5813 4581 3704 42 26 0 chr5 34801989 34802645 -164827505 - L1P2 LINE L1 -572 5582 4913 * 3980 30 6 2 chr5 34802641 34803140 -164827010 + L1P LINE L1 2701 3201 -2945 1317 160 16 29 chr5 34803140 34803384 -164826766 + MLT1B LTR MaLR 148 388 -2 194 301 0 14 chr5 34803671 34803744 -164826406 + L2 LINE L2 2317 2388 -926 1467 213 50 79 chr5 34803756 34804235 -164825915 - MLT1C LTR MaLR 0 467 3 809 333 93 38 chr5 34804321 34805049 -164825101 - L2 LINE L2 -3 3310 2543 1908 211 36 101 chr5 34805095 34805760 -164824390 + MLT1E2 LTR MaLR 1 622 -4 192 152 0 0 chr5 34806346 34806379 -164823771 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 395 276 29 16 chr5 34806580 34806767 -164823383 - L1MC/D LINE L1 -537 5584 5484 222 160 0 0 chr5 34807474 34807524 -164822626 + A-rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr5 34807624 34807647 -164822503 + AT_rich Low_complexity Low_complexity 1 23 0 51 65 0 0 chr5 34807847 34807940 -164822210 + AT_rich Low_complexity Low_complexity 1 93 0 242 254 45 9 chr5 34808116 34808226 -164821924 + HAL1 LINE L1 2252 2365 -142 1504 163 89 21 chr5 34808312 34808650 -164821500 + MER46B DNA MER2_type 1 236 0 284 169 34 0 chr5 34809152 34809211 -164820939 - Tigger4(Zombi) DNA MER2_type -72 2659 2599 324 324 51 34 chr5 34810207 34810383 -164819767 + L2 LINE L2 3133 3311 -2 26 0 0 0 chr5 34810856 34810882 -164819268 + AT_rich Low_complexity Low_complexity 1 26 0 334 294 163 22 chr5 34811425 34811541 -164818609 + L1ME3A LINE L1 4499 4597 -1549 378 0 0 0 chr5 34811541 34811583 -164818567 + (TG)n Simple_repeat Simple_repeat 1 42 0 334 294 163 22 chr5 34811583 34812099 -164818051 + L1ME3A LINE L1 4597 5220 -926 2301 92 20 0 chr5 34812131 34812423 -164817727 + AluSg SINE Alu 7 304 -6 436 354 56 0 chr5 34812437 34812581 -164817569 - MER91A DNA MER1_type -43 153 2 228 285 39 31 chr5 34812589 34812719 -164817431 + L1ME3A LINE L1 5215 5345 -801 3076 90 16 14 chr5 34812791 34813234 -164816916 + MLT2A1 LTR ERVL 1 444 0 646 290 117 21 chr5 34813260 34813629 -164816521 + L1ME3A LINE L1 5494 5911 -259 1694 168 49 41 chr5 34813629 34813974 -164816176 - MER7A DNA MER2_type 0 346 1 646 290 117 21 chr5 34813974 34814032 -164816118 + L1ME3A LINE L1 5911 5962 -208 1745 227 42 18 chr5 34814331 34814780 -164815370 - MLT1C LTR MaLR 0 467 8 223 313 14 116 chr5 34815750 34815897 -164814253 - MIR3 SINE MIR -3 205 74 22 0 0 0 chr5 34816369 34816391 -164813759 + AT_rich Low_complexity Low_complexity 1 22 0 2526 161 25 2 chr5 34816861 34817308 -164812842 - L1PB4 LINE L1 0 6156 5700 1773 162 13 0 chr5 34817308 34817623 -164812527 + L1PB4 LINE L1 5365 5683 -473 2100 161 14 55 chr5 34817632 34817819 -164812331 + MSTB LTR MaLR 1 194 -232 2145 134 0 6 chr5 34817819 34818133 -164812017 - AluSx SINE Alu 0 312 1 2100 161 14 55 chr5 34818133 34818361 -164811789 + MSTB LTR MaLR 194 399 -27 216 67 0 0 chr5 34818361 34818391 -164811759 + (T)n Simple_repeat Simple_repeat 1 30 0 4744 141 26 5 chr5 34819667 34820483 -164809667 - L1MC2 LINE L1 -3 6341 5509 33 56 0 0 chr5 34820859 34820913 -164809237 + AT_rich Low_complexity Low_complexity 1 54 0 22 0 0 0 chr5 34822737 34822759 -164807391 + AT_rich Low_complexity Low_complexity 1 22 0 268 304 89 25 chr5 34822921 34823079 -164807071 + LTR16A LTR ERVL 276 443 -7 980 358 38 19 chr5 34823112 34823693 -164806457 + HERV16 LTR ERVL 48 639 -4357 403 217 225 14 chr5 34823735 34823873 -164806277 + MER96 DNA MER1_type 5 171 -4 662 311 36 8 chr5 34824450 34824698 -164805452 + HERV16 LTR ERVL 1710 1964 -3032 1393 352 63 18 chr5 34824715 34825985 -164804165 + HERV16 LTR ERVL 2683 3997 -1657 285 286 24 16 chr5 34825985 34826111 -164804039 + HERV16 LTR ERVL 3895 4021 -1743 326 307 66 18 chr5 34826333 34826499 -164803651 + HERV16 LTR ERVL 4150 4323 -1331 707 298 85 34 chr5 34826528 34827037 -164803113 + HERV16 LTR ERVL 4494 4983 -502 385 297 125 0 chr5 34827343 34827471 -164802679 - MER58B DNA MER1_type 0 341 198 307 321 66 58 chr5 34827665 34827802 -164802348 - L2 LINE L2 -3 3269 3132 685 332 70 27 chr5 34828204 34828764 -164801386 - L2 LINE L2 -1001 2313 1730 2151 103 0 35 chr5 34828859 34829170 -164800980 + AluSq SINE Alu 1 300 -13 435 160 21 0 chr5 34829333 34829427 -164800723 - L1MA7 LINE L1 -4 6287 6192 231 319 14 0 chr5 34829623 34829692 -164800458 + L1MCc LINE L1 371 440 -5983 905 275 48 22 chr5 34830166 34830620 -164799530 + L1M4 LINE L1 4225 4690 -1456 1292 204 9 20 chr5 34830778 34831098 -164799052 - MLT1A1 LTR MaLR 0 365 1 24 0 0 0 chr5 34831322 34831346 -164798804 + AT_rich Low_complexity Low_complexity 1 24 0 327 296 43 17 chr5 34832998 34833113 -164797037 - L2 LINE L2 -4 3309 3192 486 194 65 35 chr5 34833232 34833450 -164796700 - MLT1A1 LTR MaLR -92 273 1 24 0 0 0 chr5 34833663 34833687 -164796463 + AT_rich Low_complexity Low_complexity 1 24 0 324 283 62 18 chr5 34835304 34835417 -164794733 - L2 LINE L2 -4 3309 3192 202 320 27 0 chr5 34836153 34836228 -164793922 + L2 LINE L2 3237 3313 0 353 284 47 88 chr5 34836942 34837157 -164792993 + MIR SINE MIR 47 252 -10 288 138 17 0 chr5 34837265 34837323 -164792827 + L1P LINE L1 5338 5396 -769 2192 105 0 0 chr5 34837323 34837609 -164792541 + AluSg SINE Alu 1 286 -24 3656 184 33 9 chr5 34837613 34838373 -164791777 + L1MC2 LINE L1 5559 6336 -8 316 323 86 36 chr5 34838373 34838593 -164791557 - L2 LINE L2 -69 3244 3014 273 310 25 120 chr5 34838749 34838803 -164791347 + L2 LINE L2 2688 2746 -568 784 170 0 25 chr5 34838803 34838962 -164791188 - L1MA10 LINE L1 -3 6331 6177 273 310 25 120 chr5 34838962 34839223 -164790927 + L2 LINE L2 2746 2973 -341 314 250 24 0 chr5 34839313 34839397 -164790753 + L2 LINE L2 2976 3061 -252 207 159 0 164 chr5 34839638 34839846 -164790304 + (TATAG)n Simple_repeat Simple_repeat 5 178 0 220 163 0 147 chr5 34839894 34840084 -164790066 + (TATAA)n Simple_repeat Simple_repeat 5 166 0 * 225 164 0 148 chr5 34840015 34840294 -164789856 + (TATAG)n Simple_repeat Simple_repeat 1 237 0 211 164 0 155 chr5 34840373 34840580 -164789570 + (TATAG)n Simple_repeat Simple_repeat 1 175 0 * 217 153 11 142 chr5 34840432 34840622 -164789528 + (TATAA)n Simple_repeat Simple_repeat 5 169 0 309 284 55 18 chr5 34840697 34840806 -164789344 + L2 LINE L2 3197 3309 -4 607 339 80 42 chr5 34844335 34845088 -164785062 - L2 LINE L2 -269 3044 2220 1628 189 8 23 chr5 34845088 34845420 -164784730 - L1MA6 LINE L1 -221 6082 5753 1162 143 22 9 chr5 34845420 34845637 -164784513 + L1MA6 LINE L1 6074 6300 0 1628 189 8 23 chr5 34845637 34845680 -164784470 - L1MA6 LINE L1 -550 5753 5711 1113 345 171 36 chr5 34845705 34847320 -164782830 - L2 LINE L2 -1149 2165 333 575 335 12 0 chr5 34847366 34847539 -164782611 - MIR SINE MIR -56 206 32 283 287 62 53 chr5 34847871 34848080 -164782070 + MLT1I LTR MaLR 4 214 -195 1427 191 94 4 chr5 34848365 34848642 -164781508 - AluJb SINE Alu -10 302 1 21 0 0 0 chr5 34848955 34848976 -164781174 + AT_rich Low_complexity Low_complexity 1 21 0 300 200 0 0 chr5 34849801 34849876 -164780274 + CT-rich Low_complexity Low_complexity 1 75 0 257 332 137 32 chr5 34850518 34851115 -164779035 + L2 LINE L2 1713 2372 -942 1162 93 0 7 chr5 34851218 34851369 -164778781 - AluSg/x SINE Alu -30 282 133 516 363 117 11 chr5 34851378 34851755 -164778395 + L2 LINE L2 2549 2965 -349 368 346 81 0 chr5 34851834 34851970 -164778180 + L2 LINE L2 3167 3313 0 27 87 0 0 chr5 34852067 34852136 -164778014 + AT_rich Low_complexity Low_complexity 1 69 0 286 233 0 14 chr5 34852503 34852576 -164777574 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 189 255 106 85 chr5 34852760 34852854 -164777296 - L2 LINE L2 -8 3305 3210 827 217 65 28 chr5 34854358 34854575 -164775575 + LTR50 LTR ERVL 1 225 -570 294 234 102 36 chr5 34854576 34854787 -164775363 + LTR50 LTR ERVL 536 792 -3 25 31 0 0 chr5 34854799 34854831 -164775319 + AT_rich Low_complexity Low_complexity 1 32 0 2624 24 0 0 chr5 34854873 34855168 -164774982 + AluY SINE Alu 1 295 -16 360 94 0 0 chr5 34855872 34855925 -164774225 + (A)n Simple_repeat Simple_repeat 1 53 0 630 235 50 40 chr5 34856625 34856825 -164773325 - MER3 DNA MER1_type -7 202 1 2312 66 24 3 chr5 34856921 34857210 -164772940 + AluY SINE Alu 1 295 -16 415 283 58 0 chr5 34859208 34859328 -164770822 - MER94 DNA DNA -5 129 3 1190 107 12 0 chr5 34859643 34859811 -164770339 + AluSp SINE Alu 133 302 -11 419 309 40 8 chr5 34860580 34860706 -164769444 + MIR SINE MIR 15 144 -118 309 26 0 0 chr5 34861954 34861992 -164768158 + (TG)n Simple_repeat Simple_repeat 1 38 0 187 203 27 14 chr5 34862224 34862298 -164767852 + A-rich Low_complexity Low_complexity 2 76 0 214 164 16 16 chr5 34862386 34862447 -164767703 + GA-rich Low_complexity Low_complexity 3 63 0 812 294 23 3 chr5 34862835 34863185 -164766965 + L1M4 LINE L1 4786 5142 -1004 440 248 86 17 chr5 34863369 34863671 -164766479 + L1MEc LINE L1 815 1137 -5259 2749 170 37 12 chr5 34863773 34864344 -164765806 + L1MC2 LINE L1 5760 6344 0 545 141 196 117 chr5 34865340 34865503 -164764647 + MER44D DNA MER2_type 2 447 -162 2186 149 22 3 chr5 34865503 34865871 -164764279 + THE1C LTR MaLR 1 375 0 7990 136 40 0 chr5 34865871 34867090 -164763060 + THE1C-int LTR MaLR 1 1268 -312 234 0 0 0 chr5 34867259 34867285 -164762865 + (CA)n Simple_repeat Simple_repeat 2 27 0 215 167 0 24 chr5 34867286 34867328 -164762822 + (TATG)n Simple_repeat Simple_repeat 2 42 0 24445 136 19 34 chr5 34867622 34868786 -164761364 + L1PA8A LINE L1 26 1207 -5239 198 0 0 0 chr5 34868786 34868808 -164761342 + (CAA)n Simple_repeat Simple_repeat 3 24 0 24445 136 19 34 chr5 34868808 34874088 -164756062 + L1PA8A LINE L1 1207 6417 -29 212 21 21 62 chr5 34875661 34875709 -164754441 + (TA)n Simple_repeat Simple_repeat 2 47 0 11537 131 23 28 chr5 34875809 34876973 -164753177 - Tigger1 DNA MER2_type 0 2418 1267 2361 88 0 3 chr5 34876973 34877279 -164752871 + AluY SINE Alu 3 307 -4 11537 131 23 28 chr5 34877279 34878053 -164752097 - Tigger1 DNA MER2_type -1151 1267 490 439 233 117 44 chr5 34878367 34878573 -164751577 - LTR52 LTR ERVL -200 221 1 394 348 18 71 chr5 34878971 34879158 -164750992 + L2 LINE L2 2866 3024 -289 1623 164 7 11 chr5 34879158 34879457 -164750693 + AluJb SINE Alu 9 306 0 394 348 18 71 chr5 34879457 34879662 -164750488 + L2 LINE L2 3024 3238 -75 527 315 105 5 chr5 34880001 34880220 -164749930 + MIR SINE MIR 11 251 -11 21 0 0 0 chr5 34880444 34880465 -164749685 + AT_rich Low_complexity Low_complexity 1 21 0 2508 67 0 3 chr5 34880833 34881145 -164749005 - AluY SINE Alu 0 311 1 22 35 0 0 chr5 34881592 34881621 -164748529 + AT_rich Low_complexity Low_complexity 1 29 0 442 304 88 5 chr5 34882895 34883112 -164747038 - LTR16C LTR ERVL 0 491 257 301 140 193 0 chr5 34883417 34883474 -164746676 + Tigger2 DNA MER2_type 1 68 -2650 * 1933 128 15 181 chr5 34883459 34883991 -164746159 + Tigger2 DNA MER2_type 2267 2710 -8 204 407 57 14 chr5 34884102 34884242 -164745908 + L2 LINE L2 3122 3267 -5 53 69 0 0 chr5 34885187 34885289 -164744861 + AT_rich Low_complexity Low_complexity 1 102 0 249 235 59 0 chr5 34885805 34885890 -164744260 + L1M4 LINE L1 4500 4589 -1557 21 0 0 0 chr5 34886055 34886076 -164744074 + AT_rich Low_complexity Low_complexity 1 21 0 2485 122 6 0 chr5 34886098 34886458 -164743692 - THE1B LTR MaLR -2 362 1 8118 126 51 35 chr5 34886458 34887780 -164742370 - THE1B-int LTR MaLR 0 1580 238 207 316 38 0 chr5 34888009 34888088 -164742062 + L2 LINE L2 3229 3310 -3 21 0 0 0 chr5 34888606 34888627 -164741523 + AT_rich Low_complexity Low_complexity 1 21 0 29 94 0 0 chr5 34889633 34889718 -164740432 + AT_rich Low_complexity Low_complexity 1 85 0 348 248 62 31 chr5 34890072 34890201 -164739949 + MIR3 SINE MIR 44 176 -32 320 305 76 23 chr5 34890685 34890816 -164739334 + L2 LINE L2 3176 3313 0 24 32 0 0 chr5 34890979 34891010 -164739140 + AT_rich Low_complexity Low_complexity 1 31 0 797 286 87 4 chr5 34891010 34891241 -164738909 - MIR SINE MIR -5 257 8 203 317 66 44 chr5 34891958 34892141 -164738009 - L2 LINE L2 -812 2502 2316 337 245 0 20 chr5 34892265 34892363 -164737787 - Charlie1 DNA MER1_type -10 2751 2656 1661 213 57 40 chr5 34892464 34892958 -164737192 - Charlie1 DNA MER1_type -518 2243 1742 2163 139 25 3 chr5 34893914 34894267 -164735883 - THE1C LTR MaLR 0 375 15 270 316 51 0 chr5 34894572 34894670 -164735480 + Tigger8 DNA MER2_type 2 104 -562 28 48 0 0 chr5 34894931 34894973 -164735177 + AT_rich Low_complexity Low_complexity 1 42 0 376 341 73 6 chr5 34894987 34895342 -164734808 + Tigger8 DNA MER2_type 284 662 -4 1531 185 3 31 chr5 34895461 34895747 -164734403 - AluJo SINE Alu -14 298 21 240 280 13 13 chr5 34896054 34896129 -164734021 + MIR SINE MIR 88 162 -100 228 235 37 0 chr5 34896419 34896500 -164733650 - HAL1 LINE L1 -173 2334 2251 297 0 0 0 chr5 34897228 34897261 -164732889 + (CA)n Simple_repeat Simple_repeat 1 33 0 209 349 40 33 chr5 34897456 34897608 -164732542 - MIR3 SINE MIR -25 183 31 469 315 108 12 chr5 34898044 34898295 -164731855 + LTR16A LTR ERVL 165 439 -11 259 344 81 19 chr5 34898383 34898543 -164731607 + HERV16 LTR ERVL 79 248 -4748 1579 235 147 5 chr5 34898710 34899139 -164731011 + MLT1E2 LTR MaLR 137 626 0 2253 89 4 0 chr5 34899331 34899612 -164730538 + AluSp SINE Alu 2 283 -30 2933 189 33 71 chr5 34901310 34902031 -164728119 - LTR8A LTR ERV1 0 727 34 851 219 31 44 chr5 34902178 34902406 -164727744 + MLT1E1 LTR MaLR 1 225 -429 1115 248 16 0 chr5 34902460 34902706 -164727444 + MLT1E1 LTR MaLR 405 654 0 300 303 11 51 chr5 34903312 34903490 -164726660 + LTR16C LTR ERVL 321 491 0 226 255 85 32 chr5 34903529 34903603 -164726547 - L2 LINE L2 -76 3237 3156 248 89 0 22 chr5 34903603 34903648 -164726502 + (CA)n Simple_repeat Simple_repeat 2 45 0 226 255 85 32 chr5 34903648 34903667 -164726483 - L2 LINE L2 -157 3156 3139 1166 167 19 23 chr5 34903698 34903914 -164726236 + AluJb SINE Alu 82 296 -16 225 164 224 0 chr5 34905083 34905150 -164725000 + L1MC4 LINE L1 6617 6698 -1344 274 285 61 42 chr5 34905843 34906008 -164724142 + L1ME3A LINE L1 5959 6126 -44 972 273 77 3 chr5 34906328 34906694 -164723456 - L1ME3A LINE L1 -286 5884 5492 206 103 0 26 chr5 34907644 34907683 -164722467 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 657 173 47 8 chr5 34907721 34907848 -164722302 + FRAM SINE Alu 9 140 -36 2433 51 0 29 chr5 34909002 34909318 -164720832 - AluY SINE Alu -4 307 1 2344 62 7 0 chr5 34909565 34909878 -164720272 - AluY SINE Alu 0 311 1 2982 134 4 8 chr5 34910472 34910948 -164719202 - MER41B LTR ERV1 -159 476 3 21 0 0 0 chr5 34911103 34911124 -164719026 + AT_rich Low_complexity Low_complexity 1 21 0 1956 166 32 54 chr5 34913413 34913854 -164716296 - LTR49 LTR ERV1 0 595 165 10471 29 1 2 chr5 34914026 34915258 -164714892 - HERVK LTR ERVK -6013 1230 1 7858 52 15 2 chr5 34915261 34916215 -164713935 - LTR5 LTR ERVK -3 966 1 13767 78 4 3 chr5 34916215 34918097 -164712053 - L1P LINE L1 -2271 3875 1993 611 311 32 16 chr5 34918213 34918522 -164711628 + L1M4 LINE L1 4020 4333 -1813 12211 175 37 22 chr5 34918832 34921146 -164709004 + L1M1 LINE L1 8 2355 -5210 1303 268 125 16 chr5 34971223 34972283 -164657867 - L1MEc LINE L1 -3213 3728 2593 1129 88 16 6 chr5 34972400 34972582 -164657568 - MER4A-int LTR ERV1 -4477 2121 1938 5252 123 58 45 chr5 34972584 34973763 -164656387 - MER4A-int LTR ERV1 -3653 1362 668 345 24 0 0 chr5 34973763 34973805 -164656345 + (TG)n Simple_repeat Simple_repeat 1 42 0 5252 123 58 45 chr5 34973805 34974482 -164655668 - MER4A-int LTR ERV1 -4347 668 1 1620 146 165 76 chr5 34974485 34974855 -164655295 - MER4A LTR ERV1 0 664 262 474 140 43 11 chr5 34974856 34974949 -164655201 - MER4A LTR ERV1 -566 98 3 7575 224 11 40 chr5 34974950 34976604 -164653546 - MLT1A1-int LTR MaLR -46 1605 1 261 364 24 34 chr5 34977784 34977990 -164652160 - ERVL LTR ERVL -670 5094 4891 377 300 18 0 chr5 34978523 34978633 -164651517 + MLT1C LTR MaLR 356 467 0 905 227 74 8 chr5 34978633 34978875 -164651275 - L1MEc LINE L1 -6104 319 62 21 0 0 0 chr5 34979922 34979943 -164650207 + AT_rich Low_complexity Low_complexity 1 21 0 339 263 0 35 chr5 34981794 34981908 -164648242 + L1MC4 LINE L1 6592 6701 -1341 5145 17 2 0 chr5 34982683 34983278 -164646872 - L1P LINE L1 -1487 4659 4064 4911 55 0 0 chr5 34983273 34983890 -164646260 + L1P LINE L1 1642 2258 -3888 * 1710 159 9 55 chr5 34985864 34986191 -164643959 + AluSx SINE Alu 1 312 0 1903 89 0 4 chr5 34987681 34987927 -164642223 - AluSc SINE Alu -20 289 45 230 366 21 0 chr5 34988097 34988190 -164641960 + MLT1H LTR MaLR 118 212 -337 393 294 116 1 chr5 34989290 34989455 -164640695 - MIR3 SINE MIR -9 199 12 2031 112 10 13 chr5 34989576 34989888 -164640262 + THE1A LTR MaLR 1 311 -44 639 245 14 7 chr5 34989993 34990136 -164640014 - MER45A DNA AcHobo -34 144 1 533 352 22 9 chr5 34990334 34990561 -164639589 - MIR SINE MIR -31 231 2 1608 224 34 25 chr5 34991498 34991857 -164638293 - MLT1A1 LTR MaLR 0 396 2 1709 218 5 14 chr5 34992503 34992870 -164637280 - MLT1A1 LTR MaLR 0 365 2 391 323 86 21 chr5 34993754 34994045 -164636105 - L3 LINE CR1 -120 1457 1148 1658 156 0 0 chr5 34994046 34994296 -164635854 - HERVL LTR ERVL -1536 4118 3869 4356 142 12 9 chr5 34994319 34995000 -164635150 - HERVL LTR ERVL -1755 3899 3217 * 6222 114 2 28 chr5 34994997 34995915 -164634235 + HERVL LTR ERVL 4504 5397 -257 1476 134 0 0 chr5 34996054 34996263 -164633887 - AluSg/x SINE Alu -11 299 91 244 293 160 55 chr5 34996345 34996745 -164633405 - L3 LINE CR1 -696 881 440 233 95 0 24 chr5 34997294 34997336 -164632814 + (TC)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr5 34997394 34997418 -164632732 + AT_rich Low_complexity Low_complexity 1 24 0 1507 207 110 78 chr5 34997559 34998096 -164632054 + MLT2B3 LTR ERVL 1 554 0 301 243 6 136 chr5 34998254 34998321 -164631829 - MLT1F LTR MaLR -8 534 501 1731 218 51 32 chr5 34998321 34998813 -164631337 - MLT1D LTR MaLR 0 505 5 301 243 6 136 chr5 34998813 34998914 -164631236 - MLT1F LTR MaLR -41 501 388 242 275 77 92 chr5 34998929 34999136 -164631014 - MLT1F LTR MaLR -200 390 187 259 344 81 19 chr5 34999416 34999576 -164630574 + HERV16-B3 LTR ERVL 79 248 -4748 1579 235 147 5 chr5 34999743 35000172 -164629978 + MLT1E2 LTR MaLR 137 626 0 2253 89 4 0 chr5 35000364 35000645 -164629505 + AluSp SINE Alu 2 283 -30 3040 186 36 63 chr5 35002344 35003057 -164627093 - LTR8A LTR ERV1 0 727 34 840 214 31 48 chr5 35003204 35003433 -164626717 + MLT1E1 LTR MaLR 1 225 -429 1115 248 16 0 chr5 35003487 35003733 -164626417 + MLT1E1 LTR MaLR 405 654 0 230 285 29 80 chr5 35004515 35004652 -164625498 + MLT1K LTR MaLR 422 551 -37 207 0 0 0 chr5 35005095 35005118 -164625032 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 809 175 23 41 chr5 35005757 35005928 -164624222 + MER58A DNA MER1_type 26 193 -31 2433 63 7 0 chr5 35005928 35006228 -164623922 + AluY SINE Alu 1 302 -9 544 62 74 0 chr5 35006815 35006896 -164623254 + PABL_A-int LTR ERV1 1563 1649 -3366 1128 179 127 4 chr5 35006897 35007126 -164623024 - LTR8 LTR ERV1 -434 257 1 296 121 138 0 chr5 35007130 35007188 -164622962 + PABL_A-int LTR ERV1 3596 3661 -1354 1201 161 68 21 chr5 35007194 35007437 -164622713 + MSTB1 LTR MaLR 174 372 -3 189 195 0 0 chr5 35007659 35007700 -164622450 + (CATA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr5 35008048 35008069 -164622081 + AT_rich Low_complexity Low_complexity 1 21 0 197 223 0 0 chr5 35008835 35008888 -164621262 + MIR SINE MIR 99 151 -57 6556 66 9 0 chr5 35009035 35009376 -164620774 - L1PA7 LINE L1 0 6154 5818 2911 16 0 0 chr5 35009376 35009694 -164620456 - AluYb8 SINE Alu 0 318 1 6556 66 9 0 chr5 35009694 35010984 -164619166 - L1PA7 LINE L1 -336 5818 4540 22 35 0 0 chr5 35011229 35011258 -164618892 + AT_rich Low_complexity Low_complexity 1 29 0 2333 107 7 0 chr5 35011792 35012102 -164618048 - AluSq SINE Alu -1 312 1 439 73 0 0 chr5 35014866 35014934 -164615216 + Alu SINE Alu 244 311 0 2293 79 10 3 chr5 35014946 35015238 -164614912 + AluSp SINE Alu 1 294 -19 226 276 79 0 chr5 35015876 35015952 -164614198 + MIR SINE MIR 170 251 -11 186 43 0 0 chr5 35016832 35016855 -164613295 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 2475 119 5 19 chr5 35019274 35019652 -164610498 - THE1C LTR MaLR 0 375 3 377 230 8 0 chr5 35019937 35020063 -164610087 + (TA)n Simple_repeat Simple_repeat 2 128 0 27 29 0 0 chr5 35020183 35020217 -164609933 + AT_rich Low_complexity Low_complexity 1 34 0 784 157 13 69 chr5 35020684 35020712 -164609438 + FAM SINE Alu 26 54 -267 2462 137 0 3 chr5 35020712 35021077 -164609073 - THE1B LTR MaLR 0 364 1 784 157 13 69 chr5 35021077 35021207 -164608943 + FAM SINE Alu 54 175 -10 413 196 54 22 chr5 35022268 35022360 -164607790 + L1MDa LINE L1 31 125 -6415 281 146 0 0 chr5 35022374 35022422 -164607728 - L1MDa LINE L1 -6452 88 41 1240 225 61 39 chr5 35022446 35022648 -164607502 + L1MDa LINE L1 115 330 -6210 2425 120 19 6 chr5 35022648 35023007 -164607143 + THE1B LTR MaLR 1 364 0 1240 225 61 39 chr5 35023007 35023164 -164606986 + L1MDa LINE L1 330 482 -6058 860 291 23 3 chr5 35024008 35024358 -164605792 + L1M4 LINE L1 4786 5142 -1004 464 248 86 17 chr5 35024541 35024843 -164605307 + L1MDa LINE L1 1140 1462 -5259 2779 168 34 12 chr5 35024945 35025510 -164604640 + L1MC2 LINE L1 5760 6336 -8 553 141 196 117 chr5 35026501 35026664 -164603486 + MER44D DNA MER2_type 2 447 -162 2166 149 22 3 chr5 35026664 35027032 -164603118 + THE1C LTR MaLR 1 375 0 9156 150 33 38 chr5 35027032 35028619 -164601531 + THE1C-int LTR MaLR 1 1580 0 614 138 0 0 chr5 35028619 35028713 -164601437 + THE1C LTR MaLR 1 94 -270 2193 141 5 30 chr5 35028713 35029018 -164601132 - L1P4 LINE L1 -468 5697 5403 2233 87 0 13 chr5 35029018 35029316 -164600834 - AluY SINE Alu -17 294 1 2193 141 5 30 chr5 35029316 35029406 -164600744 - L1P4 LINE L1 -762 5403 5312 229 204 11 45 chr5 35029633 35029721 -164600429 + GA-rich Low_complexity Low_complexity 2 86 0 2633 44 0 0 chr5 35029916 35030257 -164599893 - L1P LINE L1 -788 5358 5018 2697 45 0 0 chr5 35030257 35030575 -164599575 + L1PA4 LINE L1 5822 6152 -3 469 306 48 11 chr5 35030686 35030872 -164599278 + L2 LINE L2 2232 2424 -890 589 155 0 0 chr5 35031547 35031650 -164598500 + L1MA1 LINE L1 6200 6302 0 4890 184 97 75 chr5 35031734 35032308 -164597842 - L1MC3 LINE L1 -20 7765 7205 271 244 39 13 chr5 35032308 35032386 -164597764 - MLT1F1 LTR MaLR -453 114 35 4890 184 97 75 chr5 35032386 35033100 -164597050 - L1MC3 LINE L1 -580 7205 6371 367 243 72 45 chr5 35035282 35035369 -164594781 - L2 LINE L2 -6 3307 3215 2341 151 33 14 chr5 35035369 35035793 -164594357 - MSTB1 LTR MaLR 0 432 1 367 243 72 45 chr5 35035793 35035816 -164594334 - L2 LINE L2 -98 3215 3194 1848 120 0 4 chr5 35036251 35036510 -164593640 - AluSg SINE Alu -14 296 39 23 0 0 0 chr5 35036725 35036748 -164593402 + AT_rich Low_complexity Low_complexity 1 23 0 4653 128 30 26 chr5 35038998 35039774 -164590376 - MER4E LTR ERV1 0 779 1 228 342 92 8 chr5 35040040 35040160 -164589990 - MIR SINE MIR -16 246 117 325 342 41 50 chr5 35040334 35040653 -164589497 - L2 LINE L2 -75 3238 2923 351 279 47 58 chr5 35040724 35040933 -164589217 - L1MC3 LINE L1 -2266 5542 5335 1931 140 40 32 chr5 35040933 35041305 -164588845 - THE1C LTR MaLR 0 375 1 351 279 47 58 chr5 35041305 35041353 -164588797 - L1MC3 LINE L1 -2473 5335 5288 366 181 0 48 chr5 35041358 35041441 -164588709 + MADE1 DNA Mariner 2 80 0 24 32 0 0 chr5 35041515 35041546 -164588604 + AT_rich Low_complexity Low_complexity 1 31 0 2590 162 16 4 chr5 35041554 35042042 -164588108 - L1MA4 LINE L1 -5 6295 5802 27 49 0 0 chr5 35043318 35043359 -164586791 + AT_rich Low_complexity Low_complexity 1 41 0 442 289 152 34 chr5 35043597 35043985 -164586165 - HAL1b LINE L1 -844 504 71 1011 210 12 51 chr5 35045368 35045625 -164584525 - MLT1A2 LTR MaLR -127 247 1 373 271 47 47 chr5 35047053 35047182 -164582968 - MIR3 SINE MIR -32 176 48 402 21 0 0 chr5 35047237 35047284 -164582866 + (TG)n Simple_repeat Simple_repeat 2 48 0 1931 132 38 0 chr5 35047628 35047946 -164582204 + MSTA LTR MaLR 1 330 -98 613 282 24 0 chr5 35048153 35048323 -164581827 + MER97a DNA MER1_type? 4 177 -717 268 294 17 34 chr5 35048462 35048581 -164581569 - HAL1b LINE L1 -748 600 484 2043 165 78 47 chr5 35048723 35049196 -164580954 - L1MC2 LINE L1 -18 6326 5839 1503 244 52 21 chr5 35049199 35049621 -164580529 + LTR47B LTR ERVL 1 435 -8 2535 282 28 25 chr5 35049629 35050123 -164580027 - L1MC2 LINE L1 -494 5839 5348 1735 123 69 4 chr5 35050123 35050399 -164579751 - AluSc SINE Alu -15 294 1 2535 282 28 25 chr5 35050399 35051075 -164579075 - L1MC2 LINE L1 -985 5348 4658 2022 142 0 0 chr5 35051075 35051370 -164578780 - AluSx SINE Alu -12 300 6 2535 282 28 25 chr5 35051370 35051552 -164578598 - L1MC2 LINE L1 -1675 4658 4478 21 36 0 0 chr5 35051724 35051752 -164578398 + AT_rich Low_complexity Low_complexity 1 28 0 1582 169 40 7 chr5 35051802 35052122 -164578028 - AluSx SINE Alu 0 329 1 789 338 68 42 chr5 35053237 35054008 -164576142 - L2 LINE L2 0 3313 2516 2025 158 42 14 chr5 35054027 35054381 -164575769 + THE1B LTR MaLR 1 364 0 10625 124 11 3 chr5 35054382 35055934 -164574216 + THE1B-int LTR MaLR 2 1566 -14 2239 120 46 6 chr5 35055941 35056291 -164573859 + THE1B LTR MaLR 1 364 0 1038 102 11 17 chr5 35056775 35056820 -164573330 + (TTTC)n Simple_repeat Simple_repeat 1 220 0 1038 102 11 17 chr5 35056820 35056997 -164573153 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 2142 110 3 0 chr5 35062267 35062558 -164567592 + AluSg SINE Alu 1 292 -18 1627 104 4 24 chr5 35062859 35063108 -164567042 + L1PA11 LINE L1 5931 6174 0 493 298 35 6 chr5 35063896 35064067 -164566083 + L1MA7 LINE L1 1216 1391 -6105 2308 286 31 52 chr5 35064260 35065707 -164564443 + L1MA7 LINE L1 2022 3122 -4443 2126 189 44 7 chr5 35065740 35066148 -164564002 + MSTB1 LTR MaLR 10 432 0 5680 233 64 28 chr5 35066204 35066476 -164563674 + L1MA7 LINE L1 3176 3437 -4128 2319 86 0 3 chr5 35066476 35066777 -164563373 + AluSq SINE Alu 1 300 -13 5680 233 64 28 chr5 35066777 35069310 -164560840 + L1MA7 LINE L1 3437 6130 -1435 4198 174 31 29 chr5 35069313 35070288 -164559862 + L1MA7 LINE L1 6732 7708 -2 23 0 0 0 chr5 35070288 35070311 -164559839 + AT_rich Low_complexity Low_complexity 1 23 0 1770 264 42 40 chr5 35070318 35071134 -164559016 - L1MC/D LINE L1 -743 6198 5569 2797 3 0 3 chr5 35071134 35071439 -164558711 - AluYa5 SINE Alu -7 304 1 1770 264 42 40 chr5 35071439 35071951 -164558199 - L1MC/D LINE L1 -1372 5569 5059 5340 91 3 8 chr5 35072009 35072782 -164557368 + L1PA8A LINE L1 5351 6119 -12 329 238 0 0 chr5 35072821 35072901 -164557249 - L1MC/D LINE L1 -1983 4958 4879 273 269 75 42 chr5 35072897 35073109 -164557041 - L1MC/D LINE L1 -4639 2304 2086 * 458 266 14 14 chr5 35073179 35073318 -164556832 - L1MC/D LINE L1 -5186 1237 1099 423 349 18 40 chr5 35073421 35073693 -164556457 - L1MC/D LINE L1 -5841 582 317 422 278 93 66 chr5 35073701 35074065 -164556085 + MLT1D LTR MaLR 1 374 -131 348 294 33 0 chr5 35074306 35074398 -164555752 + HERV16 LTR ERVL 6 100 -4896 814 338 108 10 chr5 35074604 35075216 -164554934 + HERV16 LTR ERVL 686 1357 -3639 1243 303 54 25 chr5 35075261 35075831 -164554319 + HERV16 LTR ERVL 1682 2323 -2776 782 235 6 45 chr5 35075946 35076125 -164554025 - AluJo SINE Alu -137 175 4 241 302 78 78 chr5 35076131 35076426 -164553724 - L2 LINE L2 -18 3295 3001 211 133 0 22 chr5 35076969 35077014 -164553136 + (TG)n Simple_repeat Simple_repeat 1 44 0 342 287 0 0 chr5 35077438 35077553 -164552597 + (TA)n Simple_repeat Simple_repeat 1 115 0 1103 242 54 102 chr5 35078450 35078687 -164551463 + L1ME1 LINE L1 5148 5395 -771 2398 95 3 0 chr5 35078687 35078993 -164551157 + AluSc SINE Alu 1 307 -2 1103 242 54 102 chr5 35078993 35079088 -164551062 + L1ME1 LINE L1 5395 5493 -673 2318 113 0 3 chr5 35079088 35079398 -164550752 + AluSx SINE Alu 1 309 -3 1103 242 54 102 chr5 35079398 35080013 -164550137 + L1ME1 LINE L1 5493 6054 -112 1859 115 11 4 chr5 35080176 35080436 -164549714 + AluSq SINE Alu 1 262 -51 1083 116 0 0 chr5 35080439 35080586 -164549564 + AluSp/q SINE Alu 160 306 -7 1040 198 33 67 chr5 35080586 35080611 -164549539 + L1MC4a LINE L1 6251 6275 -1533 2095 130 72 23 chr5 35080611 35080958 -164549192 - THE1B LTR MaLR 0 364 1 1040 198 33 67 chr5 35080958 35081291 -164548859 + L1MC4a LINE L1 6275 6597 -1211 868 154 143 42 chr5 35081328 35081587 -164548563 + LTR12 LTR ERV1 1 285 -429 305 191 0 0 chr5 35081587 35081650 -164548500 + LTR30 LTR ERV1 552 614 -108 712 164 25 0 chr5 35081651 35081773 -164548377 + LTR12 LTR ERV1 350 474 -240 3394 240 84 18 chr5 35081816 35082946 -164547204 + L1MC4a LINE L1 6603 7807 -1 426 20 0 0 chr5 35083014 35083065 -164547085 + (TG)n Simple_repeat Simple_repeat 2 52 0 2071 133 3 0 chr5 35083329 35083629 -164546521 - AluSx SINE Alu -11 301 1 563 255 116 35 chr5 35083673 35083991 -164546159 - L1M4 LINE L1 -3104 3042 2699 516 311 67 77 chr5 35084246 35084741 -164545409 - HAL1 LINE L1 -905 1602 1113 233 263 0 26 chr5 35084854 35084930 -164545220 - HAL1 LINE L1 -1471 1036 963 280 196 0 0 chr5 35085651 35085707 -164544443 - MER116 DNA Mariner -17 63 8 2375 74 0 43 chr5 35086896 35087221 -164542929 + AluY SINE Alu 1 311 0 512 234 122 11 chr5 35087320 35087735 -164542415 - MER69 DNA AcHobo 0 2526 1992 1368 320 13 11 chr5 35087811 35088345 -164541805 - MER69 DNA AcHobo -1870 656 122 1192 125 0 0 chr5 35088380 35088548 -164541602 - AluSx SINE Alu -9 301 134 550 163 0 0 chr5 35088548 35088634 -164541516 - AluSx SINE Alu -227 86 1 214 178 0 22 chr5 35089851 35089896 -164540254 + CT-rich Low_complexity Low_complexity 2 45 0 234 0 0 0 chr5 35089896 35089922 -164540228 + (CA)n Simple_repeat Simple_repeat 1 26 0 26 50 0 0 chr5 35089968 35090008 -164540142 + AT_rich Low_complexity Low_complexity 1 40 0 1794 180 38 34 chr5 35090150 35090706 -164539444 - MLT2A2 LTR ERVL 0 554 1 6816 106 6 4 chr5 35090706 35091701 -164538449 - HERVL-A2 LTR ERVL 0 5654 4658 5653 102 43 33 chr5 35091697 35091754 -164538396 - HERVL-A2 LTR ERVL -1710 3944 3889 * 2199 94 3 35 chr5 35091754 35092072 -164538078 - AluSc SINE Alu -1 308 1 5653 102 43 33 chr5 35092072 35092935 -164537215 - HERVL-A2 LTR ERVL -1765 3889 3014 291 250 5 165 chr5 35094750 35094831 -164535319 + MER5B DNA MER1_type 1 29 -149 1998 152 116 21 chr5 35094831 35095220 -164534930 - MSTA LTR MaLR -2 426 1 291 250 5 165 chr5 35095220 35095350 -164534800 + MER5B DNA MER1_type 29 178 0 28 61 0 0 chr5 35096495 35096544 -164533606 + AT_rich Low_complexity Low_complexity 1 49 0 5151 161 22 7 chr5 35096996 35098312 -164531838 - L1PA16 LINE L1 0 6166 4839 331 310 139 19 chr5 35098526 35098684 -164531466 + MIR SINE MIR 46 222 -40 348 64 0 0 chr5 35098976 35099023 -164531127 + (CA)n Simple_repeat Simple_repeat 1 47 0 192 179 0 0 chr5 35099995 35100034 -164530116 + CT-rich Low_complexity Low_complexity 1 39 0 1567 175 7 41 chr5 35100185 35100502 -164529648 + AluJo SINE Alu 1 307 0 825 190 0 35 chr5 35101349 35101523 -164528627 - MLT1B LTR MaLR 0 390 223 704 187 97 93 chr5 35101528 35101785 -164528365 - MLT1B LTR MaLR -127 263 6 1860 63 0 67 chr5 35102319 35102610 -164527540 + AluY SINE Alu 44 317 0 2161 109 0 31 chr5 35104112 35104434 -164525716 + AluSq SINE Alu 1 312 -1 9377 26 3 211 chr5 35104635 35106396 -164523754 + SVA Other Other 7 1409 0 2038 149 0 0 chr5 35107309 35107605 -164522545 + AluSx SINE Alu 1 296 -16 436 252 111 7 chr5 35107970 35108105 -164522045 + MLT1A2 LTR MaLR 27 175 -199 205 250 16 16 chr5 35108108 35108172 -164521978 + C-rich Low_complexity Low_complexity 4 67 0 2226 122 0 13 chr5 35108302 35108613 -164521537 + AluSx SINE Alu 1 307 -5 239 167 33 0 chr5 35108751 35108811 -164521339 + (TATAA)n Simple_repeat Simple_repeat 4 65 0 24 0 0 0 chr5 35108913 35108937 -164521213 + AT_rich Low_complexity Low_complexity 1 24 0 849 54 9 0 chr5 35110671 35110782 -164519368 - L1PA4 LINE L1 -2 6153 6042 2254 121 36 6 chr5 35110782 35111142 -164519008 - L1PA15 LINE L1 -4 6161 5788 1838 164 4 0 chr5 35111765 35112069 -164518081 + AluSx SINE Alu 1 305 0 314 247 0 12 chr5 35112722 35112807 -164517343 + MLT1I LTR MaLR 326 409 0 2247 110 0 0 chr5 35113507 35113799 -164516351 + AluSx SINE Alu 1 292 -20 240 329 0 0 chr5 35114248 35114321 -164515829 - MIR SINE MIR -1 261 189 370 319 35 6 chr5 35115614 35115783 -164514367 + MLT1J LTR MaLR 44 217 -294 2142 117 0 10 chr5 35116408 35116699 -164513451 - AluSx SINE Alu -24 288 1 881 254 116 22 chr5 35116897 35117252 -164512898 - MLT2B1 LTR ERVL -127 393 6 2070 133 0 3 chr5 35117738 35118024 -164512126 + AluSx SINE Alu 1 285 -27 26 0 0 0 chr5 35118034 35118060 -164512090 + AT_rich Low_complexity Low_complexity 1 26 0 341 346 44 15 chr5 35118280 35118416 -164511734 + MIR3 SINE MIR 20 159 -49 378 363 81 42 chr5 35119205 35119538 -164510612 - L2 LINE L2 -31 3241 2896 2119 129 38 32 chr5 35120495 35120819 -164509331 + THE1C LTR MaLR 1 329 -46 1798 136 74 40 chr5 35120819 35121171 -164508979 - THE1B LTR MaLR 0 364 1 2119 129 38 32 chr5 35121171 35121219 -164508931 + THE1C LTR MaLR 329 375 0 246 348 116 49 chr5 35122184 35122451 -164507699 + L3 LINE CR1 243 527 -1050 1527 166 80 9 chr5 35122941 35123290 -164506860 - L1MA8 LINE L1 -4 6287 5914 716 220 65 0 chr5 35123358 35123434 -164506716 + L1MA9 LINE L1 6077 6147 -165 264 30 0 0 chr5 35123434 35123467 -164506683 + (CA)n Simple_repeat Simple_repeat 2 34 0 716 220 65 0 chr5 35123467 35123576 -164506574 + L1MA9 LINE L1 6147 6274 -38 8538 138 16 6 chr5 35126615 35128826 -164501324 - L1PA10 LINE L1 -5 6163 3919 999 135 13 0 chr5 35128827 35128983 -164501167 + L1P LINE L1 3573 3730 -2416 717 97 18 9 chr5 35128983 35129096 -164501054 - MLT2B2 LTR ERVL -401 114 1 205 255 0 0 chr5 35129256 35129307 -164500843 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 204 97 0 0 chr5 35129709 35129740 -164500410 + (CAT)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr5 35130717 35130742 -164499408 + AT_rich Low_complexity Low_complexity 1 25 0 221 239 14 42 chr5 35130764 35130906 -164499244 + (TTTA)n Simple_repeat Simple_repeat 1 138 0 249 188 62 0 chr5 35131705 35131801 -164498349 + (TA)n Simple_repeat Simple_repeat 2 103 0 24 0 0 0 chr5 35132364 35132388 -164497762 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 35132964 35132986 -164497164 + AT_rich Low_complexity Low_complexity 1 22 0 202 367 143 0 chr5 35134003 35134101 -164496049 - MIR SINE MIR -96 166 55 1142 142 69 37 chr5 35134539 35134757 -164495393 - AluJb SINE Alu -1 311 87 2437 90 0 3 chr5 35135113 35135423 -164494727 + AluSc SINE Alu 1 309 0 2227 52 0 0 chr5 35136127 35136399 -164493751 + AluY SINE Alu 30 301 -10 1161 176 19 14 chr5 35137068 35137284 -164492866 - AluJo SINE Alu -14 298 82 26 0 0 0 chr5 35139314 35139340 -164490810 + AT_rich Low_complexity Low_complexity 1 26 0 242 356 59 17 chr5 35139555 35139673 -164490477 + L2 LINE L2 3147 3269 -3 966 213 0 14 chr5 35139729 35139936 -164490214 - L1PB4 LINE L1 -1 6155 5952 291 336 96 52 chr5 35140534 35140763 -164489387 - MER102b DNA MER1_type 0 341 103 1475 227 98 16 chr5 35140816 35141182 -164488968 - MSTD LTR MaLR 0 396 1 23 33 0 0 chr5 35141349 35141379 -164488771 + AT_rich Low_complexity Low_complexity 1 30 0 4393 280 67 30 chr5 35141530 35143450 -164486700 - L1MCa LINE L1 -1597 4967 3121 2331 83 0 0 chr5 35143450 35143750 -164486400 - AluY SINE Alu -11 300 1 4393 280 67 30 chr5 35143750 35144774 -164485376 - L1MCa LINE L1 -3443 3121 2137 1878 95 4 8 chr5 35144774 35145036 -164485114 - AluY SINE Alu -2 309 49 4393 280 67 30 chr5 35145036 35146191 -164483959 - L1MCa LINE L1 -4427 2137 570 393 331 46 61 chr5 35146459 35146722 -164483428 - L1MCa LINE L1 -5613 432 174 3615 186 56 6 chr5 35146752 35147450 -164482700 + ERVL-B1 LTR ERVL 3212 3944 -1820 7652 185 71 38 chr5 35147468 35148878 -164481272 + ERVL-B1 LTR ERVL 4066 5538 -226 2344 140 19 73 chr5 35148878 35149335 -164480815 - L1MA8 LINE L1 -18 6273 5846 1877 160 16 0 chr5 35149335 35149641 -164480509 - AluJb SINE Alu -1 311 1 2344 140 19 73 chr5 35149641 35149703 -164480447 - L1MA8 LINE L1 -445 5846 5782 7652 185 71 38 chr5 35149703 35149931 -164480219 + ERVL-B1 LTR ERVL 5538 5757 -7 858 254 21 0 chr5 35149931 35150120 -164480030 + MLT2B1 LTR ERVL 1 193 -327 801 244 6 0 chr5 35150103 35150279 -164479871 + MLT2B2 LTR ERVL 339 515 0 * 590 223 18 0 chr5 35150629 35150741 -164479409 - MER81 DNA DNA 0 114 1 2413 197 36 53 chr5 35151728 35152257 -164477893 - MLT2B1 LTR ERVL 0 520 1 572 307 67 4 chr5 35152272 35152497 -164477653 - LTR16A LTR ERVL 0 450 212 2043 133 0 0 chr5 35152612 35152923 -164477227 + AluSq SINE Alu 1 311 0 280 267 12 0 chr5 35152939 35153025 -164477125 - LTR16A LTR ERVL -343 107 21 22 35 0 0 chr5 35154080 35154109 -164476041 + AT_rich Low_complexity Low_complexity 1 29 0 22 99 0 0 chr5 35154788 35154859 -164475291 + AT_rich Low_complexity Low_complexity 1 71 0 640 175 45 126 chr5 35154993 35155216 -164474934 + L1MA9 LINE L1 6070 6274 -38 29 28 0 0 chr5 35155216 35155252 -164474898 + AT_rich Low_complexity Low_complexity 1 36 0 2438 65 7 0 chr5 35155925 35156233 -164473917 - AluY SINE Alu 0 311 2 198 0 0 0 chr5 35157013 35157035 -164473115 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 458 231 149 8 chr5 35159005 35159139 -164471011 - MLT1J2 LTR MaLR -234 216 64 22 35 0 0 chr5 35159297 35159326 -164470824 + AT_rich Low_complexity Low_complexity 1 29 0 305 85 0 21 chr5 35159429 35159476 -164470674 - Alu SINE Alu -13 289 244 242 208 19 0 chr5 35159464 35159517 -164470633 - AluSg/x SINE Alu -133 169 116 * 2203 102 7 0 chr5 35160170 35160465 -164469685 + AluSc SINE Alu 1 297 -12 2263 115 0 0 chr5 35160470 35160774 -164469376 + AluSq SINE Alu 1 304 -9 1310 129 0 15 chr5 35162152 35162354 -164467796 - THE1-int LTR MaLR -262 1318 1120 468 145 3 0 chr5 35162982 35163084 -164467066 - L1P5 LINE L1 -448 5708 5606 23 33 0 0 chr5 35163177 35163207 -164466943 + AT_rich Low_complexity Low_complexity 1 30 0 441 182 40 30 chr5 35163701 35163800 -164466350 - MER53 DNA DNA -88 101 2 737 269 74 52 chr5 35164183 35164588 -164465562 - L2 LINE L2 -71 3242 2829 290 181 0 28 chr5 35164656 35164728 -164465422 + (CAGAGA)n Simple_repeat Simple_repeat 3 72 0 686 79 0 20 chr5 35164778 35164879 -164465271 + MER4A LTR ERV1 1 99 -565 1531 146 211 38 chr5 35164879 35165221 -164464929 + MER4A LTR ERV1 262 662 -2 601 303 89 16 chr5 35165222 35165536 -164464614 - L2 LINE L2 -518 2796 2460 280 206 33 76 chr5 35167085 35167177 -164462973 - L2 LINE L2 0 3313 3226 806 316 120 31 chr5 35167515 35167579 -164462571 - L2 LINE L2 -8 3305 3248 1977 116 0 0 chr5 35167579 35167855 -164462295 + AluSx SINE Alu 31 306 -6 806 316 120 31 chr5 35167855 35168214 -164461936 - L2 LINE L2 -65 3248 2844 1468 221 0 26 chr5 35168573 35168876 -164461274 + AluJo SINE Alu 1 295 -17 204 200 0 0 chr5 35168894 35168939 -164461211 + (CATA)n Simple_repeat Simple_repeat 2 46 0 252 0 0 0 chr5 35169920 35169948 -164460202 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2405 45 0 10 chr5 35169951 35170241 -164459909 - AluY SINE Alu -24 287 1 1721 97 32 4 chr5 35170437 35170685 -164459465 - AluSx SINE Alu -12 300 46 1146 184 25 72 chr5 35170685 35171039 -164459111 - MER31A LTR ERV1 -48 437 7 198 196 22 0 chr5 35171108 35171154 -164458996 + L2 LINE L2 3265 3311 -2 239 261 80 36 chr5 35171322 35171460 -164458690 - MLT1K LTR MaLR -115 473 330 456 344 33 28 chr5 35171513 35171728 -164458422 - MLT1K LTR MaLR -340 248 33 204 349 30 0 chr5 35171756 35171822 -164458328 - L2 LINE L2 -273 2999 2932 21 0 0 0 chr5 35172046 35172067 -164458083 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr5 35172739 35172778 -164457372 + AT_rich Low_complexity Low_complexity 1 39 0 287 250 53 38 chr5 35173219 35173351 -164456799 + MLT1I LTR MaLR 1 134 -275 456 285 6 24 chr5 35173965 35174130 -164456020 - MER46C DNA MER2_type -29 309 148 3323 206 80 75 chr5 35175284 35175638 -164454512 - Charlie1 DNA MER1_type -16 2745 2394 2360 58 41 0 chr5 35175638 35175933 -164454217 + AluY SINE Alu 1 307 -4 3323 206 80 75 chr5 35175933 35176822 -164453328 - Charlie1 DNA MER1_type -367 2394 1496 273 241 0 0 chr5 35176840 35176894 -164453256 - Charlie1 DNA MER1_type -2705 56 3 2107 123 7 0 chr5 35178424 35178726 -164451424 + AluSx SINE Alu 1 304 -8 25 65 0 0 chr5 35179028 35179074 -164451076 + AT_rich Low_complexity Low_complexity 1 46 0 309 371 81 9 chr5 35179417 35179627 -164450523 - MIR SINE MIR -26 236 12 2625 135 16 0 chr5 35181779 35182208 -164447942 + L1PB1 LINE L1 5712 6147 -4 442 160 0 85 chr5 35182367 35182461 -164447689 - LTR29 LTR ERV1 -72 550 465 1004 189 26 0 chr5 35182469 35182659 -164447491 - L1PA16 LINE L1 -1 6165 5971 4615 139 17 4 chr5 35182659 35183419 -164446731 - L1PA16 LINE L1 -135 7450 6681 * 7569 160 38 0 chr5 35183413 35184639 -164445511 - L1PA16 LINE L1 -5194 2371 1099 580 161 45 0 chr5 35184636 35184748 -164445402 - L1PA16 LINE L1 -7432 133 17 * 496 154 34 51 chr5 35184752 35184814 -164445336 - L1PA16 LINE L1 -12 6154 6093 2276 115 47 16 chr5 35184814 35185178 -164444972 - THE1C LTR MaLR 0 375 1 496 154 34 51 chr5 35185178 35185232 -164444918 - L1PA16 LINE L1 -73 6093 6040 4129 259 75 37 chr5 35185259 35187533 -164442617 + L1M4 LINE L1 152 2649 -4176 2365 139 14 0 chr5 35187547 35187906 -164442244 + THE1B LTR MaLR 1 364 0 9432 143 41 5 chr5 35187906 35189431 -164440719 + THE1B-int LTR MaLR 1 1580 0 2150 150 8 33 chr5 35189436 35189803 -164440347 + THE1B LTR MaLR 7 364 0 360 206 0 0 chr5 35189805 35189896 -164440254 + L1M4 LINE L1 2621 2711 -3933 484 145 0 0 chr5 35189906 35189975 -164440175 + AluS SINE Alu 1 69 -244 369 208 14 69 chr5 35190076 35190206 -164439944 + L1M4 LINE L1 3055 3178 -3466 2503 114 8 0 chr5 35190206 35190558 -164439592 + THE1A LTR MaLR 1 355 0 369 208 14 69 chr5 35190558 35190571 -164439579 + L1M4 LINE L1 3178 3190 -3454 1735 149 45 36 chr5 35190573 35190881 -164439269 - AluSx SINE Alu -1 311 1 1724 196 6 9 chr5 35191064 35191381 -164438769 + L1P3 LINE L1 3 318 -5557 3487 136 9 2 chr5 35191382 35191940 -164438210 + L1PA10 LINE L1 5596 6157 -11 1435 226 37 8 chr5 35191956 35192446 -164437704 + L1M4 LINE L1 3219 3722 -2922 21 36 0 0 chr5 35193092 35193120 -164437030 + AT_rich Low_complexity Low_complexity 1 28 0 270 254 45 0 chr5 35193182 35193249 -164436901 + L2 LINE L2 3244 3313 0 279 308 39 50 chr5 35194666 35194848 -164435302 + L2 LINE L2 3005 3184 -129 2200 72 7 4 chr5 35195359 35195637 -164434513 + AluSg SINE Alu 1 279 -31 231 88 0 0 chr5 35195748 35195782 -164434368 + (CA)n Simple_repeat Simple_repeat 2 35 0 253 354 19 21 chr5 35195830 35195949 -164434201 - MIR SINE MIR -87 121 4 362 312 22 23 chr5 35196148 35196344 -164433806 + L1ME1 LINE L1 5972 6163 -1 392 342 35 26 chr5 35198163 35198391 -164431759 - L2 LINE L2 -359 2955 2726 257 264 47 85 chr5 35198690 35198819 -164431331 - MLT1I LTR MaLR -57 352 229 21 0 0 0 chr5 35199140 35199161 -164430989 + AT_rich Low_complexity Low_complexity 1 21 0 310 302 112 12 chr5 35199610 35199779 -164430371 + L1M4 LINE L1 4314 4499 -2145 944 133 55 17 chr5 35199877 35200058 -164430092 + MLT2C2 LTR ERVL 1 188 -276 5216 51 1 5 chr5 35200063 35200725 -164429425 - L1PA5 LINE L1 0 6154 5495 2016 152 42 51 chr5 35201060 35201606 -164428544 - pTR5 LTR ERV1 -1155 1283 743 24 0 0 0 chr5 35202428 35202452 -164427698 + AT_rich Low_complexity Low_complexity 1 24 0 734 183 33 22 chr5 35203081 35203261 -164426889 - L1MC3 LINE L1 -19 7766 7585 1806 185 91 8 chr5 35203730 35204103 -164426047 + MSTB LTR MaLR 23 426 0 871 247 18 40 chr5 35204248 35204475 -164425675 + MER8 DNA MER2_type 18 239 0 1124 221 88 15 chr5 35204816 35205156 -164424994 + MLT1A1 LTR MaLR 1 365 0 180 0 0 0 chr5 35205160 35205180 -164424970 + (A)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr5 35205238 35205261 -164424889 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4533 146 18 8 chr5 35205261 35205634 -164424516 - L1PA16 LINE L1 0 6166 5798 306 0 0 0 chr5 35205634 35205668 -164424482 + (TG)n Simple_repeat Simple_repeat 2 35 0 4533 146 18 8 chr5 35205668 35206067 -164424083 - L1PA16 LINE L1 -368 5798 5386 1387 97 0 0 chr5 35206715 35206922 -164423228 + L1PA13 LINE L1 5968 6174 0 301 273 87 77 chr5 35207134 35207317 -164422833 - L1ME3A LINE L1 -23 6147 5963 485 132 13 0 chr5 35207773 35207849 -164422301 - MADE1 DNA Mariner -2 78 2 294 272 33 0 chr5 35208190 35208282 -164421868 + LTR16A1 LTR ERVL 43 137 -320 565 151 25 34 chr5 35208391 35208510 -164421640 + L1MB1 LINE L1 4561 4678 -1468 4141 193 45 4 chr5 35208513 35209783 -164420367 + L1MB1 LINE L1 4835 6165 -3 240 86 0 0 chr5 35210021 35210056 -164420094 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 1417 190 68 45 chr5 35210096 35210406 -164419744 + MLT1A1 LTR MaLR 5 325 -40 2331 130 8 13 chr5 35210406 35210783 -164419367 - THE1C LTR MaLR 0 375 1 1417 190 68 45 chr5 35210783 35210825 -164419325 + MLT1A1 LTR MaLR 325 365 0 1456 168 107 41 chr5 35211400 35211745 -164418405 - MSTB1 LTR MaLR -13 419 52 451 151 12 12 chr5 35211971 35212057 -164418093 - MSTB1 LTR MaLR -346 86 1 27 0 0 0 chr5 35212148 35212175 -164417975 + AT_rich Low_complexity Low_complexity 1 27 0 1855 104 4 22 chr5 35212488 35212756 -164417394 + AluSq SINE Alu 35 297 -16 853 248 87 60 chr5 35213158 35213493 -164416657 - MER2 DNA MER2_type 0 345 2 1630 181 3 47 chr5 35213540 35213861 -164416289 - AluJb SINE Alu -5 307 1 368 209 0 0 chr5 35214002 35214069 -164416081 + MSTD LTR MaLR 15 81 -315 915 221 0 0 chr5 35214069 35214241 -164415909 - FRAM SINE Alu 0 176 5 4919 61 0 1 chr5 35214686 35215491 -164414659 - L1P2 LINE L1 -605 5549 4746 704 187 40 76 chr5 35215491 35215689 -164414461 + MLT2C1 LTR ERVL 188 378 -19 610 125 44 15 chr5 35215773 35215979 -164414171 + (TAGA)n Simple_repeat Simple_repeat 1 212 0 285 119 0 0 chr5 35215979 35216021 -164414129 + MLT2C1 LTR ERVL 417 458 -6 497 116 23 0 chr5 35216465 35216551 -164413599 + L1MA1 LINE L1 6215 6302 0 2407 135 28 26 chr5 35216869 35217212 -164412938 - L1MA3 LINE L1 0 6305 5959 252 0 0 0 chr5 35217212 35217240 -164412910 + (TA)n Simple_repeat Simple_repeat 2 29 0 2407 135 28 26 chr5 35217240 35217356 -164412794 - L1MA3 LINE L1 -346 5959 5845 2172 165 92 8 chr5 35217484 35217877 -164412273 - MSTA LTR MaLR 0 428 3 263 318 110 35 chr5 35218891 35219064 -164411086 - L2 LINE L2 -1 3271 3086 529 163 87 0 chr5 35219791 35219883 -164410267 - Tigger3(Golem) DNA MER2_type -1 3028 2929 428 238 10 0 chr5 35219888 35219989 -164410161 - HERVL40 LTR ERVL -948 4582 4481 2928 147 129 17 chr5 35219991 35220643 -164409507 - Tigger3(Golem) DNA MER2_type -95 2934 2210 282 56 0 0 chr5 35220887 35220923 -164409227 + (CA)n Simple_repeat Simple_repeat 1 36 0 2178 272 52 63 chr5 35220990 35221928 -164408222 - HERVL40 LTR ERVL -95 5435 4508 620 271 68 6 chr5 35221922 35222263 -164407887 - HERVL40 LTR ERVL -960 4570 4191 * 2343 282 78 37 chr5 35222549 35223552 -164406598 - HERVL40 LTR ERVL -1438 4092 3049 785 277 40 16 chr5 35223766 35224015 -164406135 - HERVL40 LTR ERVL -2497 3033 2779 292 340 13 26 chr5 35224708 35224864 -164405286 - HERVL40 LTR ERVL -4145 1385 1232 2157 158 34 8 chr5 35224872 35225258 -164404892 - MER57A LTR ERV1 0 403 8 538 289 67 54 chr5 35225263 35225578 -164404572 - HERVL40 LTR ERVL -4307 1223 905 617 389 42 0 chr5 35225835 35226118 -164404032 - L2 LINE L2 -527 2787 2493 34 0 0 0 chr5 35226740 35226774 -164403376 + AT_rich Low_complexity Low_complexity 1 34 0 3926 137 74 55 chr5 35228331 35229288 -164400862 - pTR5 LTR ERV1 0 2606 1524 306 0 0 0 chr5 35229694 35229728 -164400422 + (TC)n Simple_repeat Simple_repeat 1 34 0 396 0 0 0 chr5 35229729 35229773 -164400377 + (TG)n Simple_repeat Simple_repeat 2 45 0 1845 201 68 5 chr5 35229824 35230192 -164399958 + MSTD LTR MaLR 1 391 -5 2232 119 6 3 chr5 35231743 35232055 -164398095 - AluSq SINE Alu 0 313 1 1706 184 0 13 chr5 35232084 35232400 -164397750 - AluJo SINE Alu 0 312 1 32 0 0 0 chr5 35232692 35232724 -164397426 + AT_rich Low_complexity Low_complexity 1 32 0 840 137 0 34 chr5 35232874 35233020 -164397130 - LTR39 LTR ERV1 -605 178 38 312 214 0 0 chr5 35233691 35233761 -164396389 + MLT1L LTR MaLR 539 608 -7 280 287 32 69 chr5 35233770 35233958 -164396192 + L2 LINE L2 1746 1926 -1388 2101 104 45 3 chr5 35233998 35234287 -164395863 - AluSq SINE Alu -12 301 1 274 344 71 50 chr5 35234529 35234852 -164395298 + L2 LINE L2 2266 2595 -719 1020 226 84 25 chr5 35235214 35235537 -164394613 + MER2 DNA MER2_type 2 343 -1 2391 87 3 0 chr5 35236126 35236436 -164393714 + AluY SINE Alu 1 311 0 873 262 34 86 chr5 35236658 35237043 -164393107 + MLT1A1 LTR MaLR 1 365 0 5436 192 57 48 chr5 35237168 35238017 -164392133 + L1MC1 LINE L1 19 886 -5540 216 97 0 0 chr5 35238017 35238048 -164392102 + (CA)n Simple_repeat Simple_repeat 2 32 0 5436 192 57 48 chr5 35238048 35238513 -164391637 + L1MC1 LINE L1 886 1345 -5081 6246 98 16 3 chr5 35238605 35239504 -164390646 + L1PA10 LINE L1 5254 6163 -5 5348 271 78 20 chr5 35239520 35241331 -164388819 + L1MC1 LINE L1 1212 2917 -3509 1872 173 144 5 chr5 35241331 35241707 -164388443 - MSTA LTR MaLR 0 428 1 5348 271 78 20 chr5 35241707 35242454 -164387696 + L1MC1 LINE L1 2917 5073 -1353 3114 172 47 10 chr5 35242453 35243224 -164386926 + L1MC1 LINE L1 5386 6177 -436 * 1298 66 6 11 chr5 35243368 35243549 -164386601 + AluY SINE Alu 126 305 -6 243 0 0 0 chr5 35243928 35243955 -164386195 + (TG)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr5 35245720 35245746 -164384404 + AT_rich Low_complexity Low_complexity 1 26 0 1752 185 3 0 chr5 35245905 35246192 -164383958 - AluSx SINE Alu -16 296 9 241 325 52 56 chr5 35246435 35246684 -164383466 + MER102b DNA MER1_type 84 331 -10 42017 38 24 2 chr5 35246701 35252718 -164377432 + L1PA3 LINE L1 2 6155 0 1435 201 64 56 chr5 35253050 35253443 -164376707 - MSTD LTR MaLR 0 396 1 1258 19 6 19 chr5 35253591 35253750 -164376400 - L1PA4 LINE L1 0 6155 5999 493 199 46 46 chr5 35254034 35254165 -164375985 + L1MA9 LINE L1 6142 6272 -40 32 57 0 0 chr5 35254409 35254462 -164375688 + AT_rich Low_complexity Low_complexity 1 53 0 884 169 0 12 chr5 35254607 35254767 -164375383 + L1PB3 LINE L1 5995 6152 -2 3737 82 8 6 chr5 35254996 35255506 -164374644 - MER9 LTR ERVK 0 511 1 224 250 0 0 chr5 35256687 35256739 -164373411 + A-rich Low_complexity Low_complexity 1 52 0 25 65 0 0 chr5 35257822 35257868 -164372282 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr5 35258957 35258986 -164371164 + AT_rich Low_complexity Low_complexity 1 29 0 415 300 70 25 chr5 35258996 35259196 -164370954 + L1ME1 LINE L1 5952 6160 -6 1203 231 140 3 chr5 35259703 35260024 -164370126 - MLT1A1 LTR MaLR 0 365 1 255 356 132 15 chr5 35261282 35261487 -164368663 + MIR SINE MIR 2 230 -32 21 0 0 0 chr5 35262168 35262189 -164367961 + AT_rich Low_complexity Low_complexity 1 21 0 920 241 22 0 chr5 35262373 35262651 -164367499 - MER33 DNA MER1_type -15 309 26 184 366 14 0 chr5 35262909 35262980 -164367170 - MIR3 SINE MIR -22 186 115 659 162 62 22 chr5 35263567 35263746 -164366404 + MER53 DNA DNA 1 186 -3 181 342 26 0 chr5 35263970 35264046 -164366104 + L3 LINE CR1 1219 1296 -281 26 50 0 0 chr5 35264181 35264221 -164365929 + AT_rich Low_complexity Low_complexity 1 40 0 28 86 0 0 chr5 35264315 35264385 -164365765 + AT_rich Low_complexity Low_complexity 1 70 0 719 307 194 2 chr5 35265253 35265670 -164364480 - L2 LINE L2 -3 3310 2814 481 343 70 43 chr5 35266368 35267001 -164363149 + L2 LINE L2 2656 3311 -2 2005 143 0 3 chr5 35267872 35268215 -164361935 + AluSx SINE Alu 7 348 0 297 324 10 0 chr5 35268732 35268834 -164361316 + L1ME LINE L1 5543 5645 -476 186 43 0 0 chr5 35270605 35270628 -164359522 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2605 296 102 41 chr5 35270672 35271819 -164358331 + L1MDb LINE L1 12 1228 -5181 2798 250 80 31 chr5 35271841 35273031 -164357119 + L1MDb LINE L1 1353 2613 -3793 238 258 166 65 chr5 35273186 35273403 -164356747 - Charlie8 DNA MER1_type -1015 1402 77 213 342 39 22 chr5 35274562 35274713 -164355437 + MIR3 SINE MIR 18 172 -36 27 0 0 0 chr5 35274920 35274947 -164355203 + AT_rich Low_complexity Low_complexity 1 27 0 24 67 0 0 chr5 35275067 35275112 -164355038 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr5 35275168 35275190 -164354960 + AT_rich Low_complexity Low_complexity 1 22 0 33 43 0 0 chr5 35276312 35276359 -164353791 + AT_rich Low_complexity Low_complexity 1 47 0 1928 135 56 36 chr5 35276378 35276734 -164353416 + THE1B LTR MaLR 1 363 -1 10582 119 11 4 chr5 35276735 35278304 -164351846 + THE1B-int LTR MaLR 1 1580 0 2086 128 47 36 chr5 35278304 35278664 -164351486 + THE1B LTR MaLR 1 364 0 237 100 0 0 chr5 35278876 35278916 -164351234 - L1MA3 LINE L1 -8 6297 6258 * 326 167 0 0 chr5 35278912 35278972 -164351178 + L1MA1 LINE L1 5952 6011 -291 242 299 142 16 chr5 35278988 35279115 -164351035 - MIR SINE MIR -64 198 56 25 83 0 0 chr5 35279311 35279371 -164350779 + AT_rich Low_complexity Low_complexity 1 60 0 24 0 0 0 chr5 35280162 35280186 -164349964 + AT_rich Low_complexity Low_complexity 1 24 0 1067 265 92 35 chr5 35280206 35280576 -164349574 - L1MC4 LINE L1 -1039 7003 6613 4453 79 11 2 chr5 35280593 35281216 -164348934 - L1PA7 LINE L1 0 6154 5526 5098 100 13 16 chr5 35281217 35281985 -164348165 + L1P LINE L1 1754 2519 -3627 2247 103 3 0 chr5 35281982 35282303 -164347847 + L1P LINE L1 3554 3875 -2271 * 27 62 0 0 chr5 35282994 35283042 -164347108 + AT_rich Low_complexity Low_complexity 1 48 0 32 43 0 0 chr5 35283540 35283586 -164346564 + AT_rich Low_complexity Low_complexity 1 46 0 628 138 62 8 chr5 35283586 35283716 -164346434 - L1MA8 LINE L1 -20 6271 6135 279 337 68 0 chr5 35285006 35285196 -164344954 + L1ME LINE L1 5488 5690 -431 1862 136 0 27 chr5 35285509 35285810 -164344340 + AluSx SINE Alu 3 295 -17 303 324 54 18 chr5 35286019 35286241 -164343909 + L1MC/D LINE L1 5315 5544 -2264 363 250 16 32 chr5 35286282 35286406 -164343744 + L1MEc LINE L1 35 156 -6240 890 257 85 20 chr5 35286439 35286793 -164343357 - MLT1C LTR MaLR -32 435 59 1053 217 110 82 chr5 35286800 35287164 -164342986 + MLT1A2 LTR MaLR 1 374 0 579 351 82 53 chr5 35287216 35287786 -164342364 + L1MEc LINE L1 216 802 -5594 365 256 57 11 chr5 35287812 35287988 -164342162 + L1MEc LINE L1 903 1086 -5310 1364 228 39 75 chr5 35287997 35288435 -164341715 + MSTB2 LTR MaLR 19 440 -17 664 299 96 47 chr5 35288449 35289234 -164340916 + L1MEc LINE L1 1084 1906 -4490 1112 167 99 30 chr5 35289245 35289369 -164340781 - L1M3 LINE L1 -484 5684 5570 1852 133 26 47 chr5 35289369 35289751 -164340399 - THE1C LTR MaLR -1 374 1 1112 167 99 30 chr5 35289751 35289859 -164340291 - L1M3 LINE L1 -598 5570 5436 772 230 11 17 chr5 35289865 35290039 -164340111 - FRAM SINE Alu -4 172 1 1181 175 41 12 chr5 35290044 35290385 -164339765 - L1M3 LINE L1 -743 5403 5087 1973 166 93 0 chr5 35290442 35290809 -164339341 + LTR42 LTR ERVL 71 471 -24 438 225 9 54 chr5 35290834 35290945 -164339205 + L1MA10 LINE L1 5675 5780 -388 324 188 0 0 chr5 35290945 35291014 -164339136 + (TG)n Simple_repeat Simple_repeat 2 70 0 242 213 0 0 chr5 35291019 35291066 -164339084 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 2300 179 60 23 chr5 35291066 35291597 -164338553 + L1MA10 LINE L1 5783 6333 -1 1268 246 105 30 chr5 35291599 35292300 -164337850 + L1MEc LINE L1 1970 2690 -3525 202 206 29 0 chr5 35293018 35293086 -164337064 + (TA)n Simple_repeat Simple_repeat 1 70 0 303 276 35 0 chr5 35293094 35293181 -164336969 + L1MC4 LINE L1 6614 6703 -1339 682 211 11 11 chr5 35293194 35293374 -164336776 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 256 236 22 22 chr5 35293392 35293481 -164336669 - L1MC4 LINE L1 -1340 6702 6614 256 271 0 21 chr5 35293492 35293588 -164336562 - L1MC4 LINE L1 -1340 6702 6609 743 329 104 31 chr5 35294780 35295260 -164334890 + L2 LINE L2 2397 2911 -403 5268 144 78 34 chr5 35295269 35295604 -164334546 - Tigger3b DNA MER2_type -1797 1231 912 203 61 30 0 chr5 35295604 35295637 -164334513 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 5268 144 78 34 chr5 35295637 35296377 -164333773 - Tigger3b DNA MER2_type -2116 912 109 288 353 41 0 chr5 35296460 35296582 -164333568 + L2 LINE L2 3182 3308 -5 475 70 76 29 chr5 35296822 35296993 -164333157 + (TA)n Simple_repeat Simple_repeat 1 179 0 2112 125 0 0 chr5 35296994 35297289 -164332861 - AluSx SINE Alu -16 296 2 3294 194 14 14 chr5 35297331 35298036 -164332114 - L1MB3 LINE L1 -3 6180 5476 1767 212 37 47 chr5 35298058 35298741 -164331409 - L1M3 LINE L1 -657 5762 5083 670 271 31 3 chr5 35298733 35299021 -164331129 - L1M3 LINE L1 -2772 3610 3315 * 815 140 173 0 chr5 35299021 35299171 -164330979 - AluSg/x SINE Alu 0 310 135 9256 193 80 28 chr5 35299182 35300359 -164329791 - L1M3 LINE L1 -3114 3268 2154 1527 205 6 22 chr5 35300359 35300676 -164329474 - AluJb SINE Alu 0 312 1 9256 193 80 28 chr5 35300676 35301157 -164328993 - L1M3 LINE L1 -4228 2154 1699 207 0 0 0 chr5 35301157 35301180 -164328970 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 9256 193 80 28 chr5 35301180 35302319 -164327831 - L1M3 LINE L1 -4683 1699 320 2130 105 0 0 chr5 35302976 35303253 -164326897 + AluSx SINE Alu 27 303 -9 234 211 53 0 chr5 35305239 35305315 -164324835 + (TTA)n Simple_repeat Simple_repeat 3 82 0 1432 238 85 21 chr5 35305882 35306307 -164323843 + MLT1C LTR MaLR 3 454 -13 1922 103 0 4 chr5 35306706 35306967 -164323183 + AluSg SINE Alu 39 298 -12 2495 113 3 3 chr5 35308222 35308586 -164321564 + THE1B LTR MaLR 1 364 0 184 171 0 24 chr5 35308962 35309003 -164321147 + L2 LINE L2 3270 3309 -4 24 53 0 0 chr5 35310145 35310183 -164319967 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr5 35310217 35310239 -164319911 + (TA)n Simple_repeat Simple_repeat 2 23 0 240 211 0 18 chr5 35311189 35311246 -164318904 + MER58 DNA MER1_type 53 108 -2312 818 249 129 11 chr5 35311558 35311931 -164318219 + L1MC/D LINE L1 4586 5002 -1144 4643 117 11 4 chr5 35311934 35312636 -164317514 + L1MA1 LINE L1 5408 6114 -188 419 169 13 0 chr5 35312636 35312713 -164317437 - MADE1 DNA Mariner 0 80 3 1155 130 5 0 chr5 35312714 35312898 -164317252 + L1MA1 LINE L1 6112 6296 -6 391 254 70 5 chr5 35312916 35313117 -164317033 + L1MC/D LINE L1 4993 5206 -940 611 201 60 0 chr5 35313121 35313305 -164316845 + L1MC/D LINE L1 5256 5450 -2545 421 86 0 0 chr5 35364005 35364063 -164266087 + THE1C LTR MaLR 2 59 -316 2059 140 56 8 chr5 35364074 35364431 -164265719 + THE1C LTR MaLR 1 374 -1 1495 176 31 0 chr5 35364702 35364992 -164265158 + L1MA5A LINE L1 4685 4983 -1163 675 128 9 0 chr5 35365008 35365117 -164265033 - L1M1 LINE L1 -873 5430 5321 5958 139 38 44 chr5 35365456 35366772 -164263378 + L1MA5A LINE L1 4960 6291 -6 26 50 0 0 chr5 35366772 35366812 -164263338 + AT_rich Low_complexity Low_complexity 1 40 0 28 48 0 0 chr5 35366903 35366945 -164263205 + AT_rich Low_complexity Low_complexity 1 42 0 290 337 10 31 chr5 35368879 35368977 -164261173 + MIR SINE MIR 6 101 -161 4532 85 6 14 chr5 35369489 35370134 -164260016 + L1PA10 LINE L1 5528 6167 -1 196 355 0 0 chr5 35370785 35370847 -164259303 + MIR SINE MIR 49 110 -152 2134 209 0 7 chr5 35370923 35371329 -164258821 - ERVL LTR ERVL -444 5320 4918 3970 244 45 10 chr5 35371331 35372294 -164257856 - ERVL LTR ERVL -953 4811 3816 1749 45 0 0 chr5 35372394 35372595 -164257555 + LTR5 LTR ERVK 769 969 0 8237 273 46 17 chr5 35372595 35375110 -164255040 - ERVL LTR ERVL -2592 3172 508 2173 210 72 98 chr5 35375436 35376141 -164254009 - LTR8A LTR ERV1 -7 720 34 684 183 8 8 chr5 35376394 35376514 -164253636 + FLAM_A SINE Alu 1 120 -13 2352 91 0 3 chr5 35377064 35377371 -164252779 + AluSq SINE Alu 1 306 -7 1623 186 3 72 chr5 35377459 35377835 -164252315 - MLT1B LTR MaLR 0 390 41 216 0 0 0 chr5 35378344 35378368 -164251782 + (AAATG)n Simple_repeat Simple_repeat 3 26 0 186 43 0 0 chr5 35378680 35378703 -164251447 + (TA)n Simple_repeat Simple_repeat 2 24 0 180 77 0 0 chr5 35380171 35380197 -164249953 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 345 110 0 200 chr5 35380255 35380355 -164249795 - MADE1 DNA Mariner 0 80 1 1935 125 28 0 chr5 35381742 35382031 -164248119 + AluSx SINE Alu 1 297 -15 207 100 0 0 chr5 35383403 35383433 -164246717 + (T)n Simple_repeat Simple_repeat 1 30 0 557 224 31 25 chr5 35385866 35386027 -164244123 - L1MA9 LINE L1 -1 6311 6150 * 1169 205 37 16 chr5 35386023 35386345 -164243805 - L1 LINE L1 -1441 4705 4377 1877 174 126 5 chr5 35386347 35386727 -164243423 - MSTA LTR MaLR -2 426 1 8189 200 42 2 chr5 35386735 35388322 -164241828 - MSTA-int LTR MaLR -1 1650 1 1405 146 91 8 chr5 35388322 35388576 -164241574 - MSTA LTR MaLR 0 428 154 1803 170 159 5 chr5 35388576 35388947 -164241203 - MSTA LTR MaLR 0 428 1 957 286 8 0 chr5 35390499 35390747 -164239403 + HERV16 LTR ERVL 1058 1307 -3689 1618 174 19 0 chr5 35390873 35391138 -164239012 + MSTA LTR MaLR 159 428 0 1819 336 47 24 chr5 35391427 35391794 -164238356 + HERV16 LTR ERVL 1665 2022 -2974 2146 188 39 12 chr5 35391794 35392209 -164237941 + MSTB LTR MaLR 1 426 0 1819 336 47 24 chr5 35392209 35392702 -164237448 + HERV16 LTR ERVL 2022 2544 -2452 264 119 51 0 chr5 35392783 35392842 -164237308 + (TA)n Simple_repeat Simple_repeat 2 63 0 414 254 9 26 chr5 35392842 35392956 -164237194 + HERV16 LTR ERVL 2607 2718 -2278 969 236 20 18 chr5 35393104 35393371 -164236779 - MER74C LTR ERVL -196 362 15 757 329 105 51 chr5 35393435 35394282 -164235868 + HERV16 LTR ERVL 3829 4721 -933 263 333 59 52 chr5 35394529 35394935 -164235215 + HERV16 LTR ERVL 4969 5377 -387 469 361 57 25 chr5 35395054 35395492 -164234658 + LTR16B LTR ERVL 1 452 -12 210 346 38 30 chr5 35397437 35397570 -164232580 - L2 LINE L2 -24 3289 3156 25 0 0 0 chr5 35398948 35398973 -164231177 + AT_rich Low_complexity Low_complexity 1 25 0 317 62 21 0 chr5 35399039 35399087 -164231063 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 5095 140 35 6 chr5 35399533 35400611 -164229539 + L1PA16 LINE L1 5063 6166 0 1938 132 13 3 chr5 35401013 35401323 -164228827 + HSMAR2 DNA Mariner 2 314 -988 2516 71 0 0 chr5 35401323 35401634 -164228516 + AluY SINE Alu 1 311 0 3414 190 29 1 chr5 35401641 35402308 -164227842 + HSMAR2 DNA Mariner 617 1301 -1 21 0 0 0 chr5 35402469 35402490 -164227660 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr5 35403548 35403601 -164226549 + AT_rich Low_complexity Low_complexity 1 53 0 509 333 156 20 chr5 35404350 35404792 -164225358 - L2 LINE L2 0 3313 2812 3236 78 2 7 chr5 35404797 35405247 -164224903 - LTR7 LTR ERV1 -2 448 1 2513 80 49 13 chr5 35405247 35405635 -164224515 - HERVH LTR ERV1 0 7713 7312 1352 139 19 0 chr5 35405625 35405841 -164224309 - HERVH LTR ERV1 -1894 5819 5600 * 4165 154 1 1 chr5 35405842 35406504 -164223646 - HERVH LTR ERV1 -2564 5149 4488 3264 122 6 6 chr5 35406507 35407008 -164223142 - HERVH LTR ERV1 -3721 3992 3492 946 133 7 0 chr5 35406998 35407148 -164223002 - HERVH LTR ERV1 -4423 3290 3140 * 19998 98 16 10 chr5 35407127 35410105 -164220045 - HERVH LTR ERV1 -4718 2995 1 3208 74 11 7 chr5 35410107 35410553 -164219597 - LTR7 LTR ERV1 -2 448 1 301 337 57 34 chr5 35410587 35410762 -164219388 - L2 LINE L2 -534 2780 2602 293 234 16 16 chr5 35411102 35411166 -164218984 + L2 LINE L2 2985 3048 -224 1394 212 79 6 chr5 35411455 35411795 -164218355 - MLT1A1 LTR MaLR 0 365 1 27 0 0 0 chr5 35412061 35412088 -164218062 + AT_rich Low_complexity Low_complexity 1 27 0 1663 259 56 51 chr5 35413557 35414199 -164215951 - L1ME1 LINE L1 -5 6173 5526 1440 286 58 68 chr5 35414224 35415259 -164214891 - L1M2 LINE L1 -4292 2666 1229 21 0 0 0 chr5 35415542 35415563 -164214587 + AT_rich Low_complexity Low_complexity 1 21 0 414 152 15 0 chr5 35416589 35416655 -164213495 + AluS SINE Alu 3 69 -234 7169 50 0 0 chr5 35416758 35417587 -164212563 - LTR5 LTR ERVK -140 829 1 1079 278 75 0 chr5 35417587 35417882 -164212268 + ERVL LTR ERVL 3167 3483 -2281 1014 201 12 136 chr5 35418055 35418393 -164211757 + MLT1B LTR MaLR 91 386 -4 406 295 43 56 chr5 35419343 35419577 -164210573 + HAL1 LINE L1 817 1047 -1460 394 270 96 108 chr5 35419783 35420127 -164210023 - L2 LINE L2 -1 3312 2973 440 330 53 23 chr5 35420148 35420412 -164209738 + HAL1 LINE L1 1265 1536 -971 1381 207 21 18 chr5 35420521 35420806 -164209344 - AluJo SINE Alu -26 286 1 546 270 124 22 chr5 35420991 35421169 -164208981 + MIR SINE MIR 30 225 -37 328 308 8 8 chr5 35421198 35421318 -164208832 + CT-rich Low_complexity Low_complexity 5 124 0 237 197 16 16 chr5 35421823 35421884 -164208266 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 22 35 0 0 chr5 35422527 35422556 -164207594 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr5 35423026 35423048 -164207102 + AT_rich Low_complexity Low_complexity 1 22 0 458 323 45 0 chr5 35423453 35423586 -164206564 + MER5B DNA MER1_type 40 178 0 250 288 15 0 chr5 35423910 35423976 -164206174 + MER5B DNA MER1_type 2 68 -110 337 303 46 72 chr5 35424241 35424436 -164205714 - HAL1b LINE L1 -876 472 283 1640 178 4 4 chr5 35424459 35424734 -164205416 - AluJo SINE Alu -37 275 1 320 299 56 53 chr5 35424878 35425162 -164204988 - L1M4c LINE L1 -5172 1212 928 1349 211 131 21 chr5 35425496 35425917 -164204233 - MLT1C LTR MaLR 0 467 1 27 0 0 0 chr5 35425977 35426004 -164204146 + AT_rich Low_complexity Low_complexity 1 27 0 1195 333 76 23 chr5 35426006 35426131 -164204019 - L2 LINE L2 -81 3232 3115 216 67 0 0 chr5 35426131 35426161 -164203989 + (TA)n Simple_repeat Simple_repeat 2 31 0 1195 333 76 23 chr5 35426161 35426914 -164203236 - L2 LINE L2 -198 3115 2311 196 316 145 0 chr5 35427027 35427103 -164203047 - MER5A DNA MER1_type 0 189 103 329 93 0 0 chr5 35427608 35427651 -164202499 - THE1A LTR MaLR -1 354 312 9953 117 5 3 chr5 35427774 35429203 -164200947 - THE1B-int LTR MaLR -147 1433 3 2082 118 30 33 chr5 35429205 35429570 -164200580 - THE1B LTR MaLR 0 364 1 243 299 84 9 chr5 35431391 35431498 -164198652 + MIR SINE MIR 111 225 -37 262 299 116 60 chr5 35431650 35431934 -164198216 - MLT1K LTR MaLR -121 467 168 216 111 0 0 chr5 35432054 35432090 -164198060 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 29 0 0 0 chr5 35433056 35433085 -164197065 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 35433593 35433621 -164196529 + AT_rich Low_complexity Low_complexity 1 28 0 1837 161 0 0 chr5 35433870 35434166 -164195984 - AluJb SINE Alu 0 308 13 286 167 0 19 chr5 35434203 35434257 -164195893 + MIR SINE MIR 172 224 -38 1793 137 48 3 chr5 35434538 35434830 -164195320 + AluSx SINE Alu 1 305 -7 1154 271 84 25 chr5 35435330 35435736 -164194414 - LTR40b LTR ERVL 0 462 33 357 298 68 0 chr5 35435951 35436112 -164194038 + HAL1 LINE L1 2240 2411 -96 247 305 0 11 chr5 35436168 35436263 -164193887 + (TATATG)n Simple_repeat Simple_repeat 6 99 0 638 234 115 8 chr5 35438849 35439101 -164191049 - MER33 DNA MER1_type -17 307 29 5620 23 3 0 chr5 35439101 35439760 -164190390 + L1PA4 LINE L1 5495 6155 0 21 0 0 0 chr5 35440020 35440041 -164190109 + AT_rich Low_complexity Low_complexity 1 21 0 315 293 163 59 chr5 35440384 35440623 -164189527 + L2 LINE L2 2234 2497 -817 1834 166 125 13 chr5 35441063 35441448 -164188702 - MSTA LTR MaLR 0 428 1 7581 223 62 10 chr5 35441448 35442948 -164187202 - MSTA-int LTR MaLR 0 1580 3 1784 161 130 18 chr5 35442950 35443335 -164186815 - MSTA LTR MaLR 0 428 1 252 276 97 21 chr5 35443943 35444088 -164186062 - MER67D LTR ERV1 0 514 359 1018 242 58 8 chr5 35444111 35444371 -164185779 - MER67C LTR ERV1 -325 385 113 428 228 72 84 chr5 35444373 35444636 -164185514 + MER4C LTR ERV1 1 260 -205 1197 232 101 41 chr5 35444668 35445277 -164184873 - LTR48B LTR ERV1 0 707 2 945 218 61 75 chr5 35445518 35445798 -164184352 + AluJo SINE Alu 5 280 -32 252 0 0 0 chr5 35445801 35445829 -164184321 + (CA)n Simple_repeat Simple_repeat 1 28 0 263 368 111 14 chr5 35445936 35446080 -164184070 + L2 LINE L2 3114 3271 -1 231 61 0 0 chr5 35446436 35446469 -164183681 + (GA)n Simple_repeat Simple_repeat 2 34 0 1879 119 7 53 chr5 35446479 35446781 -164183369 - AluSx SINE Alu -24 288 1 244 364 37 21 chr5 35446973 35447160 -164182990 - L2 LINE L2 -823 2491 2302 25 0 0 0 chr5 35447881 35447906 -164182244 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr5 35448611 35448633 -164181517 + AT_rich Low_complexity Low_complexity 1 22 0 1639 179 7 0 chr5 35448739 35449013 -164181137 + AluSx SINE Alu 7 282 -30 755 250 11 17 chr5 35450450 35450626 -164179524 + Charlie1a DNA MER1_type 3 177 -1278 2106 252 42 20 chr5 35451038 35451678 -164178472 + Charlie1a DNA MER1_type 373 1026 -429 239 316 221 9 chr5 35451981 35452047 -164178103 - L2 LINE L2 -171 3142 3091 1470 77 10 0 chr5 35452047 35452243 -164177907 - AluSp SINE Alu -1 312 115 239 316 221 9 chr5 35452243 35452466 -164177684 - L2 LINE L2 -222 3091 2793 1526 214 138 22 chr5 35452491 35452860 -164177290 + MSTB LTR MaLR 1 412 -14 181 370 160 20 chr5 35452887 35453087 -164177063 + MIR SINE MIR 14 241 -21 435 336 51 23 chr5 35453180 35453397 -164176753 - L2 LINE L2 -570 2744 2522 438 258 159 7 chr5 35453843 35453994 -164176156 - MER5A DNA MER1_type -5 184 11 1734 129 59 18 chr5 35454925 35455211 -164174939 + AluSx SINE Alu 1 298 -14 1315 88 0 0 chr5 35455354 35455525 -164174625 - AluY SINE Alu -11 300 130 18886 170 44 18 chr5 35455818 35458333 -164171817 - L1MA3 LINE L1 0 7724 5276 1936 151 23 47 chr5 35458333 35458717 -164171433 + THE1C LTR MaLR 1 375 0 18886 170 44 18 chr5 35458717 35458812 -164171338 - L1MA3 LINE L1 -2448 5276 5185 270 0 0 0 chr5 35458812 35458842 -164171308 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 18886 170 44 18 chr5 35458842 35463655 -164166495 - L1MA3 LINE L1 -2539 5185 91 300 27 0 0 chr5 35463655 35463692 -164166458 + (TG)n Simple_repeat Simple_repeat 2 38 0 18886 170 44 18 chr5 35463692 35463769 -164166381 - L1MA3 LINE L1 -7633 91 17 214 245 0 0 chr5 35463898 35463947 -164166203 + (CACCAT)n Simple_repeat Simple_repeat 5 53 0 5577 258 65 44 chr5 35464716 35467668 -164162482 + L1MD2 LINE L1 2608 5637 -722 1908 203 29 37 chr5 35467668 35468156 -164161994 - MER66B LTR ERV1 -2 484 1 5577 258 65 44 chr5 35468156 35468877 -164161273 + L1MD2 LINE L1 5637 6341 -18 21 0 0 0 chr5 35468940 35468961 -164161189 + AT_rich Low_complexity Low_complexity 1 21 0 2143 120 0 10 chr5 35468973 35469281 -164160869 + AluSx SINE Alu 1 305 -7 269 250 15 0 chr5 35471324 35471392 -164158758 + (TA)n Simple_repeat Simple_repeat 1 69 0 23 0 0 0 chr5 35471507 35471530 -164158620 + AT_rich Low_complexity Low_complexity 1 23 0 256 323 68 12 chr5 35471583 35471744 -164158406 + L1MEc LINE L1 39 208 -6188 264 208 26 52 chr5 35471792 35471869 -164158281 + MER63 DNA MER1_type 660 734 -326 400 320 102 54 chr5 35471950 35472945 -164157205 + L1MEc LINE L1 186 1227 -5169 579 207 56 22 chr5 35473486 35473665 -164156485 + MER53 DNA DNA 2 186 -3 1756 146 0 41 chr5 35474220 35474549 -164155601 + AluSx SINE Alu 1 317 0 26 0 0 0 chr5 35474841 35474867 -164155283 + AT_rich Low_complexity Low_complexity 1 26 0 1210 113 0 0 chr5 35475168 35475328 -164154822 + AluSg/x SINE Alu 134 293 -19 2010 137 15 66 chr5 35475500 35475895 -164154255 + THE1C LTR MaLR 1 375 0 4090 115 2 5 chr5 35475897 35476463 -164153687 + THE1C-int LTR MaLR 1017 1580 0 2282 128 16 19 chr5 35476463 35476839 -164153311 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 35477565 35477588 -164152562 + AT_rich Low_complexity Low_complexity 1 23 0 380 286 167 9 chr5 35479451 35479877 -164150273 - L1M4 LINE L1 -1372 4774 4282 267 133 0 0 chr5 35480026 35480071 -164150079 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 32 26 0 0 chr5 35480095 35480134 -164150016 + AT_rich Low_complexity Low_complexity 1 39 0 324 316 36 12 chr5 35480360 35480528 -164149622 - L1M4 LINE L1 -2336 3810 3639 282 29 0 0 chr5 35480583 35480618 -164149532 + (T)n Simple_repeat Simple_repeat 1 35 0 358 316 36 27 chr5 35481509 35481838 -164148312 - L1MEc LINE L1 -5019 1377 1046 901 129 0 0 chr5 35481909 35482041 -164148109 - MER41A LTR ERV1 -422 132 1 738 131 54 0 chr5 35483610 35483740 -164146410 + MER41B LTR ERV1 498 634 -1 1390 65 0 0 chr5 35484304 35484473 -164145677 + AluY SINE Alu 133 301 -10 35 0 0 0 chr5 35484965 35485000 -164145150 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 35485208 35485236 -164144914 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr5 35485999 35486034 -164144116 + AT_rich Low_complexity Low_complexity 1 35 0 2347 78 0 7 chr5 35486077 35486384 -164143766 - AluY SINE Alu -6 305 1 21 0 0 0 chr5 35486724 35486745 -164143405 + AT_rich Low_complexity Low_complexity 1 21 0 527 213 149 27 chr5 35487249 35487437 -164142713 + L1ME3A LINE L1 5889 6099 -71 23 33 0 0 chr5 35487471 35487501 -164142649 + AT_rich Low_complexity Low_complexity 1 30 0 343 310 75 57 chr5 35487505 35487837 -164142313 + L1M4 LINE L1 5054 5391 -755 880 265 49 12 chr5 35488082 35488327 -164141823 - MLT1E3 LTR MaLR -370 254 1 1222 205 46 49 chr5 35488573 35488943 -164141207 + MLT1A2 LTR MaLR 4 372 -2 2388 69 0 0 chr5 35491259 35491550 -164138600 - AluSg SINE Alu -9 301 11 2182 72 0 31 chr5 35491724 35492014 -164138136 - AluY SINE Alu -6 305 25 1907 131 109 3 chr5 35492153 35492482 -164137668 - THE1B LTR MaLR 0 364 1 6095 104 37 10 chr5 35492503 35493432 -164136718 - LTR13 LTR ERVK 0 954 1 198 143 0 0 chr5 35493512 35493547 -164136603 + (TG)n Simple_repeat Simple_repeat 2 36 0 958 180 77 109 chr5 35494941 35495318 -164134832 - MLT1A1 LTR MaLR 0 365 1 2224 93 10 0 chr5 35495603 35495905 -164134245 + AluSq SINE Alu 1 305 -8 292 318 65 56 chr5 35496844 35497058 -164133092 - MIR SINE MIR -21 241 26 21 57 0 0 chr5 35497926 35497961 -164132189 + AT_rich Low_complexity Low_complexity 1 35 0 270 0 0 0 chr5 35498514 35498544 -164131606 + (T)n Simple_repeat Simple_repeat 1 30 0 1336 160 4 4 chr5 35498550 35498781 -164131369 - AluSx SINE Alu -81 231 1 42 65 0 0 chr5 35499081 35499158 -164130992 + AT_rich Low_complexity Low_complexity 1 77 0 298 239 124 73 chr5 35499181 35499371 -164130779 - HAL1 LINE L1 -4 2503 2324 2150 129 3 3 chr5 35499371 35499682 -164130468 - AluSx SINE Alu 0 312 2 298 239 124 73 chr5 35499682 35499943 -164130207 - HAL1 LINE L1 -183 2324 2029 722 285 97 24 chr5 35500219 35500685 -164129465 - HAL1 LINE L1 -895 1612 1113 291 71 0 0 chr5 35500972 35501014 -164129136 + (TG)n Simple_repeat Simple_repeat 1 42 0 324 304 7 36 chr5 35501502 35501640 -164128510 - LTR33 LTR ERVL 0 521 388 505 148 25 0 chr5 35501649 35501730 -164128420 - MSTA LTR MaLR 0 428 346 6139 73 28 0 chr5 35501876 35502699 -164127451 - L1PA7 LINE L1 -5 6149 5304 6351 83 3 2 chr5 35502701 35503600 -164126550 + L1PA7 LINE L1 4382 5281 -865 1793 168 48 0 chr5 35504081 35504414 -164125736 - MSTA LTR MaLR -79 349 1 880 271 187 7 chr5 35504858 35505371 -164124779 + MLT1E1 LTR MaLR 1 654 0 390 127 0 42 chr5 35505371 35505442 -164124708 + L1PA15 LINE L1 4690 4757 -1389 5624 128 11 4 chr5 35505442 35506568 -164123582 + L1PA15 LINE L1 5032 6164 -1 4972 142 54 5 chr5 35506786 35507674 -164122476 - L1MA6 LINE L1 0 6300 5369 518 204 0 0 chr5 35507669 35507772 -164122378 - L1MA6 LINE L1 -1069 5077 4975 * 195 42 0 0 chr5 35508692 35508716 -164121434 + (TC)n Simple_repeat Simple_repeat 2 25 0 609 299 102 31 chr5 35508734 35509276 -164120874 - L1MC4 LINE L1 -166 7876 7297 479 168 148 0 chr5 35509285 35509386 -164120764 + L1PA16 LINE L1 6049 6164 -2 364 156 15 96 chr5 35509689 35509824 -164120326 + L1M4 LINE L1 3834 3957 -2189 322 277 58 7 chr5 35510879 35511016 -164119134 - L1ME3 LINE L1 -1 6161 6018 427 317 89 47 chr5 35511041 35512016 -164118134 - L1M4 LINE L1 -1834 4312 3297 31 0 0 0 chr5 35512635 35512666 -164117484 + AT_rich Low_complexity Low_complexity 1 31 0 757 188 7 7 chr5 35514187 35514331 -164115819 - Tigger1 DNA MER2_type 0 2418 2275 12259 149 44 30 chr5 35514855 35516105 -164114045 - Tigger1 DNA MER2_type -139 2279 983 2158 133 16 34 chr5 35516105 35516487 -164113663 + THE1C LTR MaLR 1 375 0 12259 149 44 30 chr5 35516487 35517484 -164112666 - Tigger1 DNA MER2_type -1435 983 1 2378 182 25 6 chr5 35518946 35519434 -164110716 - L1MB3 LINE L1 -2 6181 5685 1466 253 184 8 chr5 35520509 35521031 -164109119 - MER90 LTR ERV1 0 614 1 2254 80 0 3 chr5 35521720 35522022 -164108128 - L1PA13 LINE L1 -4 6159 5859 707 256 0 0 chr5 35522420 35522576 -164107574 + MER6B DNA MER2_type 1 156 -54 361 348 118 25 chr5 35523340 35523501 -164106649 + L2 LINE L2 223 398 -2916 444 296 135 32 chr5 35523883 35524356 -164105794 + L1M4 LINE L1 4166 4687 -1459 33 43 0 0 chr5 35524386 35524433 -164105717 + AT_rich Low_complexity Low_complexity 1 47 0 389 358 5 27 chr5 35524661 35524848 -164105302 - MIR SINE MIR -50 212 30 288 0 0 0 chr5 35524967 35524999 -164105151 + (CA)n Simple_repeat Simple_repeat 2 33 0 195 324 57 75 chr5 35525053 35525371 -164104779 - L2 LINE L2 -1008 2306 1995 907 255 37 69 chr5 35525391 35525768 -164104382 + MLT1A1 LTR MaLR 1 365 0 2396 83 0 13 chr5 35525780 35526092 -164104058 - AluY SINE Alu -3 308 1 677 211 57 14 chr5 35526183 35526389 -164103761 - L1PA16 LINE L1 -1 6162 5928 2381 185 7 16 chr5 35526790 35527222 -164102928 - MER44D DNA MER2_type 0 605 123 5869 74 2 26 chr5 35527577 35528376 -164101774 - LTR17 LTR ERV1 0 780 1 224 365 47 0 chr5 35529410 35529495 -164100655 - L2 LINE L2 -9 3263 3175 2505 198 73 38 chr5 35529737 35529788 -164100362 + MER67C LTR ERV1 9 57 -653 1699 147 3 69 chr5 35529788 35529884 -164100266 + AluSx SINE Alu 1 102 -210 1987 119 46 13 chr5 35529884 35530187 -164099963 + AluSp SINE Alu 1 313 0 1699 147 3 69 chr5 35530187 35530424 -164099726 + AluSx SINE Alu 102 312 0 2505 198 73 38 chr5 35530424 35531002 -164099148 + MER67C LTR ERV1 57 660 -50 2077 138 6 6 chr5 35531075 35531387 -164098763 - AluSx SINE Alu 0 312 1 2299 87 0 7 chr5 35532068 35532366 -164097784 - AluSc SINE Alu -13 296 1 253 292 34 34 chr5 35532473 35532562 -164097588 + L2 LINE L2 2211 2299 -1015 1803 168 0 30 chr5 35533742 35534040 -164096110 - AluJo SINE Alu -23 289 1 250 238 20 48 chr5 35534056 35534203 -164095947 + (CATATA)n Simple_repeat Simple_repeat 4 146 0 419 309 52 60 chr5 35534781 35535147 -164095003 - L2 LINE L2 0 3313 2951 2920 151 32 2 chr5 35536199 35536701 -164093449 - Tigger3(Golem) DNA MER2_type 0 3029 2513 449 208 208 0 chr5 35536728 35536853 -164093297 - L1MA5A LINE L1 -20 6277 6127 777 299 0 0 chr5 35536870 35537071 -164093079 - HERV17 LTR ERV1 -1067 7559 7359 10987 233 18 21 chr5 35537079 35539436 -164090714 - HERV17 LTR ERV1 -4897 3729 789 1548 111 5 0 chr5 35539436 35539643 -164090507 - AluY SINE Alu -19 292 85 10987 233 18 21 chr5 35539643 35540430 -164089720 - HERV17 LTR ERV1 -7837 789 1 732 206 9 93 chr5 35540455 35540712 -164089438 - LTR12 LTR ERV1 -98 682 238 39891 83 9 0 chr5 35540982 35546136 -164084014 + HERVL LTR ERVL 2 5198 -456 23 78 0 0 chr5 35546180 35546231 -164083919 + AT_rich Low_complexity Low_complexity 1 51 0 4498 164 40 4 chr5 35548338 35549135 -164081015 - LTR1B LTR ERV1 0 826 1 23 33 0 0 chr5 35550534 35550564 -164079586 + AT_rich Low_complexity Low_complexity 1 30 0 342 312 26 7 chr5 35550774 35550928 -164079222 + (TATATG)n Simple_repeat Simple_repeat 4 160 0 281 199 29 29 chr5 35550934 35551070 -164079080 + (CATATA)n Simple_repeat Simple_repeat 5 140 0 24 67 0 0 chr5 35551667 35551712 -164078438 + AT_rich Low_complexity Low_complexity 1 45 0 2193 131 33 28 chr5 35551811 35552201 -164077949 - Tigger2 DNA MER2_type -48 2670 2279 297 237 0 0 chr5 35552207 35552266 -164077884 - Tigger2 DNA MER2_type -2659 59 1 22 70 0 0 chr5 35552712 35552755 -164077395 + AT_rich Low_complexity Low_complexity 1 43 0 1826 184 46 57 chr5 35553009 35553284 -164076866 + Tigger2a DNA MER2_type 1 271 -2437 459 0 0 0 chr5 35553284 35553335 -164076815 + (TA)n Simple_repeat Simple_repeat 1 51 0 1826 184 46 57 chr5 35553335 35553498 -164076652 + Tigger2a DNA MER2_type 271 434 0 267 173 0 0 chr5 35553627 35553679 -164076471 + (TG)n Simple_repeat Simple_repeat 1 52 0 1841 161 5 63 chr5 35554526 35554924 -164075226 + THE1C LTR MaLR 1 375 0 359 273 105 0 chr5 35555385 35555528 -164074622 - MIR SINE MIR -8 254 97 * 882 301 65 90 chr5 35555525 35556292 -164073858 + L2 LINE L2 1820 2567 -747 21 36 0 0 chr5 35556566 35556594 -164073556 + AT_rich Low_complexity Low_complexity 1 28 0 220 139 23 0 chr5 35556910 35556953 -164073197 + (TA)n Simple_repeat Simple_repeat 2 45 0 284 111 49 0 chr5 35557057 35557138 -164073012 + (TA)n Simple_repeat Simple_repeat 2 86 0 260 296 148 0 chr5 35557640 35557748 -164072402 + MIR SINE MIR 89 212 -50 2891 16 0 0 chr5 35559113 35559431 -164070719 + AluYb8 SINE Alu 1 318 0 253 347 142 40 chr5 35560112 35560738 -164069412 - L2 LINE L2 -851 2463 1774 1777 167 0 34 chr5 35560739 35561062 -164069088 + AluJo SINE Alu 1 312 0 428 307 131 49 chr5 35561858 35562285 -164067865 - HAL1 LINE L1 -413 2094 1633 459 0 0 0 chr5 35562354 35562405 -164067745 + (TG)n Simple_repeat Simple_repeat 1 51 0 536 282 101 32 chr5 35562405 35562682 -164067468 - L1M4 LINE L1 -1289 4857 4562 284 274 54 65 chr5 35562737 35562905 -164067245 + MLT1E2-int LTR MaLR 1023 1188 -183 22 56 0 0 chr5 35563317 35563353 -164066797 + AT_rich Low_complexity Low_complexity 1 36 0 2451 159 31 5 chr5 35563394 35563815 -164066335 - MSTB1 LTR MaLR 0 432 1 224 329 29 0 chr5 35565413 35565483 -164064667 + L2 LINE L2 3194 3265 -7 182 289 0 0 chr5 35565509 35565561 -164064589 - MIR SINE MIR -126 136 85 834 259 200 77 chr5 35566142 35566698 -164063452 + MLT1E2 LTR MaLR 1 624 0 22 56 0 0 chr5 35567196 35567232 -164062918 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr5 35568427 35568456 -164061694 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 35568952 35568987 -164061163 + AT_rich Low_complexity Low_complexity 1 35 0 867 190 76 14 chr5 35569314 35569525 -164060625 + AluJo SINE Alu 9 232 -80 1345 210 31 11 chr5 35569938 35570224 -164059926 + AluJo SINE Alu 9 300 -12 1739 235 3 6 chr5 35570307 35570673 -164059477 - MLT1A1 LTR MaLR 0 365 1 1663 195 3 3 chr5 35571315 35571607 -164058543 - AluJb SINE Alu -20 292 1 33 25 0 0 chr5 35572465 35572505 -164057645 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr5 35572725 35572746 -164057404 + AT_rich Low_complexity Low_complexity 1 21 0 311 371 35 0 chr5 35573525 35573695 -164056455 - MIR SINE MIR -38 224 49 22 56 0 0 chr5 35573841 35573877 -164056273 + AT_rich Low_complexity Low_complexity 1 36 0 1298 198 16 95 chr5 35574147 35574577 -164055573 - MSTD LTR MaLR 0 396 1 30 59 0 0 chr5 35575149 35575200 -164054950 + AT_rich Low_complexity Low_complexity 1 51 0 391 314 61 53 chr5 35575324 35575490 -164054660 - L1 LINE L1 -1602 4544 4381 2001 145 7 0 chr5 35575490 35575794 -164054356 - AluSx SINE Alu -6 306 1 391 314 61 53 chr5 35575794 35576060 -164054090 - L1 LINE L1 -1765 4381 4111 2568 128 11 30 chr5 35577177 35577613 -164052537 - LTR22A LTR ERVK -30 428 1 8650 109 2 1 chr5 35577613 35579945 -164050205 - HERVK22 LTR ERVK 0 6837 2248 4869 157 1 7 chr5 35579937 35580708 -164049442 - HERVK22 LTR ERVK -5856 981 215 * 750 70 0 0 chr5 35580711 35580811 -164049339 - AluY SINE Alu -211 100 1 211 167 0 33 chr5 35581215 35581275 -164048875 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 238 339 32 38 chr5 35581275 35581588 -164048562 + HAL1 LINE L1 1341 1651 -856 203 204 19 0 chr5 35582132 35582186 -164047964 + (TA)n Simple_repeat Simple_repeat 2 56 0 286 145 14 14 chr5 35582208 35582277 -164047873 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 0 0 0 chr5 35582765 35582786 -164047364 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr5 35583551 35583589 -164046561 + AT_rich Low_complexity Low_complexity 1 38 0 274 57 0 0 chr5 35584237 35584272 -164045878 + MLT1B LTR MaLR 23 57 -333 210 302 216 22 chr5 35584417 35584639 -164045511 + L3 LINE CR1 946 1210 -367 1112 171 39 73 chr5 35586800 35587034 -164043116 - AluJo SINE Alu -66 246 21 2101 134 14 38 chr5 35587034 35587399 -164042751 + LTR18A LTR ERVL 2 357 0 2017 185 36 32 chr5 35587435 35587873 -164042277 + HERVL18 LTR ERVL 95 534 -5513 * 2064 193 12 13 chr5 35587842 35588441 -164041709 + HERVL18 LTR ERVL 1149 1810 -4237 1261 153 65 2 chr5 35588440 35588698 -164041452 + HERVL18 LTR ERVL 2119 2450 -3597 * 2080 203 3 3 chr5 35588699 35589068 -164041082 + HERVL18 LTR ERVL 2720 3088 -2959 1283 153 0 0 chr5 35589064 35589247 -164040903 + HERVL18 LTR ERVL 2952 3134 -2913 * 201 236 0 18 chr5 35589603 35589658 -164040492 + GA-rich Low_complexity Low_complexity 1 54 0 * 209 167 42 21 chr5 35589621 35589669 -164040481 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 1210 243 48 88 chr5 35589795 35590321 -164039829 - MLT1D LTR MaLR 0 505 1 1899 269 38 28 chr5 35590677 35591416 -164038734 - L1MEc LINE L1 -2109 4106 3361 811 314 32 16 chr5 35591429 35591865 -164038285 - L1MEc LINE L1 -3459 2756 2314 797 238 32 61 chr5 35591961 35592391 -164037759 - LTR40b LTR ERVL -40 422 32 2139 293 61 36 chr5 35592406 35592721 -164037429 - L1MEc LINE L1 -4056 2340 2034 3757 111 88 2 chr5 35592721 35593314 -164036836 - LTR9B LTR ERV1 0 644 1 2139 293 61 36 chr5 35593314 35594518 -164035632 - L1MEc LINE L1 -4362 2034 783 2428 133 79 11 chr5 35594538 35594836 -164035314 + LTR21A LTR ERV1 1 340 -165 5881 58 13 14 chr5 35594836 35595617 -164034533 + LTR17 LTR ERV1 1 780 0 2428 133 79 11 chr5 35595617 35595761 -164034389 + LTR21A LTR ERV1 340 473 -32 270 116 0 0 chr5 35595761 35595804 -164034346 + (TC)n Simple_repeat Simple_repeat 2 44 0 749 306 11 22 chr5 35595820 35596095 -164034055 - L1MEc LINE L1 -5640 756 485 600 150 0 10 chr5 35596099 35596199 -164033951 + MER4A LTR ERV1 1 99 -565 1677 130 160 88 chr5 35596199 35596575 -164033575 + MER4A LTR ERV1 262 664 0 988 301 54 20 chr5 35596575 35596980 -164033170 - L1MEc LINE L1 -5913 483 65 37 99 0 0 chr5 35597571 35597692 -164032458 + AT_rich Low_complexity Low_complexity 1 121 0 22 0 0 0 chr5 35598031 35598053 -164032097 + AT_rich Low_complexity Low_complexity 1 22 0 425 314 6 6 chr5 35598285 35598454 -164031696 + GA-rich Low_complexity Low_complexity 3 171 0 24 32 0 0 chr5 35599541 35599572 -164030578 + AT_rich Low_complexity Low_complexity 1 31 0 516 16 0 0 chr5 35599634 35599695 -164030455 + (CA)n Simple_repeat Simple_repeat 2 62 0 196 369 41 33 chr5 35599698 35599820 -164030330 + MIR SINE MIR 20 142 -120 345 327 92 24 chr5 35600624 35600960 -164029190 - L1M4 LINE L1 -770 5376 5018 1884 164 16 0 chr5 35601921 35602226 -164027924 - AluSx SINE Alu -2 310 1 3366 149 27 3 chr5 35602397 35602982 -164027168 + LTR43 LTR ERV1 1 599 -3 273 268 31 21 chr5 35604283 35604380 -164025770 - MLT1L LTR MaLR -5 610 513 399 309 76 50 chr5 35604520 35604821 -164025329 - MLT1L LTR MaLR -295 320 12 21 0 0 0 chr5 35605079 35605100 -164025050 + AT_rich Low_complexity Low_complexity 1 21 0 2279 95 14 0 chr5 35605781 35606077 -164024073 - AluSp SINE Alu -13 300 1 22 35 0 0 chr5 35607010 35607039 -164023111 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 35607218 35607246 -164022904 + AT_rich Low_complexity Low_complexity 1 28 0 43 0 0 0 chr5 35607340 35607383 -164022767 + AT_rich Low_complexity Low_complexity 1 43 0 346 234 112 46 chr5 35607845 35608042 -164022108 - L1ME LINE L1 -385 5736 5527 307 258 39 55 chr5 35608589 35608717 -164021433 - MLT1L LTR MaLR -326 289 164 2277 146 5 19 chr5 35608890 35609259 -164020891 - THE1B LTR MaLR 0 364 1 10915 97 2 66 chr5 35609259 35610947 -164019203 - THE1B-int LTR MaLR 0 1580 1 2067 169 8 19 chr5 35610947 35611313 -164018837 - THE1B LTR MaLR 0 364 3 848 280 46 61 chr5 35611315 35611858 -164018292 - L1ME LINE L1 -1998 4148 3614 240 277 12 60 chr5 35612280 35612363 -164017787 - MIR SINE MIR -116 146 68 265 97 0 139 chr5 35613279 35613351 -164016799 - L1MC3 LINE L1 -8 7777 7716 2037 162 64 20 chr5 35614155 35614562 -164015588 - MSTB LTR MaLR -1 425 1 32 26 0 0 chr5 35614682 35614721 -164015429 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr5 35616098 35616123 -164014027 + AT_rich Low_complexity Low_complexity 1 25 0 2479 80 0 0 chr5 35617920 35618231 -164011919 - AluY SINE Alu 0 311 1 1393 260 87 31 chr5 35618562 35618642 -164011508 + L1MD3 LINE L1 5291 5365 -2630 1684 184 0 0 chr5 35618642 35618935 -164011215 + AluJb SINE Alu 7 299 -13 1393 260 87 31 chr5 35618935 35619546 -164010604 + L1MD3 LINE L1 5365 6017 -1978 280 221 47 47 chr5 35619577 35619663 -164010487 + MER58B DNA MER1_type 226 311 -30 1980 141 13 49 chr5 35619664 35620053 -164010097 - THE1C LTR MaLR 0 375 1 1705 190 7 0 chr5 35620137 35620447 -164009703 - AluSx SINE Alu 0 312 1 787 131 8 0 chr5 35620453 35620583 -164009567 - L1PA15 LINE L1 -3 6162 6032 897 81 0 59 chr5 35620583 35620719 -164009431 + L1P4 LINE L1 5616 5743 -422 222 304 0 13 chr5 35620812 35620891 -164009259 + CT-rich Low_complexity Low_complexity 1 78 0 206 273 39 0 chr5 35620851 35620928 -164009222 + (TCTA)n Simple_repeat Simple_repeat 1 80 0 * 21 0 0 0 chr5 35621089 35621110 -164009040 + AT_rich Low_complexity Low_complexity 1 21 0 270 365 18 55 chr5 35621208 35621427 -164008723 + MIR SINE MIR 20 230 -32 264 242 57 105 chr5 35622251 35622375 -164007775 - LTR67 LTR ERVL -8 549 432 245 269 39 0 chr5 35622725 35622803 -164007347 + Charlie8 DNA MER1_type 57 137 -2280 9460 111 13 2 chr5 35622969 35624308 -164005842 + THE1B-int LTR MaLR 227 1580 0 2084 150 27 35 chr5 35624308 35624675 -164005475 + THE1B LTR MaLR 1 364 0 272 167 14 0 chr5 35624921 35624993 -164005157 + (TA)n Simple_repeat Simple_repeat 1 73 0 335 253 20 61 chr5 35624993 35625092 -164005058 + L1MC4 LINE L1 6613 6707 -1335 29 28 0 0 chr5 35625815 35625851 -164004299 + AT_rich Low_complexity Low_complexity 1 36 0 22 88 0 0 chr5 35625994 35626051 -164004099 + AT_rich Low_complexity Low_complexity 1 57 0 201 184 69 11 chr5 35627143 35627230 -164002920 + (TA)n Simple_repeat Simple_repeat 2 93 0 5456 158 26 23 chr5 35628509 35628843 -164001307 - L1MA5A LINE L1 -1 6296 5964 1950 141 10 0 chr5 35628843 35629133 -164001017 - AluSx SINE Alu -19 293 1 5456 158 26 23 chr5 35629133 35629896 -164000254 - L1MA5A LINE L1 -333 5964 5195 1106 239 100 48 chr5 35629909 35630348 -163999802 + MLT1C LTR MaLR 1 462 -5 403 283 72 30 chr5 35630843 35631009 -163999141 - MER93a LTR ERV1 -229 173 1 271 236 25 0 chr5 35631101 35631267 -163998883 + CT-rich Low_complexity Low_complexity 1 170 0 2096 113 3 0 chr5 35631517 35631841 -163998309 - AluSp SINE Alu 0 325 1 21 0 0 0 chr5 35634771 35634792 -163995358 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr5 35635974 35636009 -163994141 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5 35636086 35636114 -163994036 + AT_rich Low_complexity Low_complexity 1 28 0 1576 251 57 42 chr5 35636457 35636999 -163993151 + MER44D DNA MER2_type 1 605 0 216 0 0 0 chr5 35637082 35637106 -163993044 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1370 23 0 23 chr5 35637139 35637333 -163992817 - L1PA2 LINE L1 0 6155 5988 384 280 0 0 chr5 35638696 35638789 -163991361 + U13 snRNA snRNA 12 104 0 230 216 0 0 chr5 35638855 35638906 -163991244 + L1MC4 LINE L1 6652 6702 -1340 * 287 250 57 0 chr5 35638872 35638960 -163991190 - L1MC4 LINE L1 -1340 6702 6610 1619 224 18 3 chr5 35639251 35639577 -163990573 + MLT1A1 LTR MaLR 34 364 -1 326 227 18 45 chr5 35639577 35639683 -163990467 - LTR40c LTR ERVL -211 254 152 347 138 17 0 chr5 35639816 35639874 -163990276 - LTR40a LTR ERVL -377 142 84 281 259 63 42 chr5 35640298 35640441 -163989709 - LTR33A LTR ERVL 0 523 378 368 262 170 44 chr5 35640635 35640841 -163989309 - LTR50 LTR ERVL -545 250 19 2090 124 28 31 chr5 35641446 35641802 -163988348 - THE1A LTR MaLR 0 355 1 10786 113 14 1 chr5 35641802 35643361 -163986789 - THE1A-int LTR MaLR 0 1580 1 1907 140 16 44 chr5 35643361 35643726 -163986424 - THE1A LTR MaLR 0 355 1 266 319 0 0 chr5 35644701 35644773 -163985377 + MER5A DNA MER1_type 9 80 -109 1839 194 44 47 chr5 35644929 35645402 -163984748 + MER41B LTR ERV1 131 602 -33 489 301 39 82 chr5 35645922 35646546 -163983604 + HAL1b LINE L1 13 609 -739 878 267 80 37 chr5 35646863 35647189 -163982961 + MER93a LTR ERV1 63 402 0 1203 259 7 31 chr5 35647228 35647521 -163982629 + AluJb SINE Alu 1 286 -16 368 262 68 91 chr5 35647540 35647967 -163982183 + HAL1b LINE L1 932 1348 0 28 29 0 0 chr5 35648571 35648606 -163981544 + AT_rich Low_complexity Low_complexity 1 35 0 761 114 0 0 chr5 35648752 35648866 -163981284 + AluSg/x SINE Alu 189 302 -10 25 83 0 0 chr5 35649241 35649301 -163980849 + AT_rich Low_complexity Low_complexity 1 60 0 211 214 24 0 chr5 35649434 35649476 -163980674 + CT-rich Low_complexity Low_complexity 2 44 0 29 0 0 0 chr5 35649712 35649741 -163980409 + AT_rich Low_complexity Low_complexity 1 29 0 2033 144 39 28 chr5 35649899 35650259 -163979891 + THE1B LTR MaLR 1 364 0 5684 128 171 61 chr5 35650259 35650737 -163979413 + THE1B-int LTR MaLR 1 425 -1155 2217 72 7 7 chr5 35650737 35651027 -163979123 - AluY SINE Alu -6 305 16 5684 128 171 61 chr5 35651027 35651681 -163978469 + THE1B-int LTR MaLR 425 1258 -322 1797 224 78 23 chr5 35651875 35652309 -163977841 + MER70A LTR ERVL 1 458 -14 2062 132 7 0 chr5 35652585 35652881 -163977269 + AluSx SINE Alu 1 298 -14 29 0 8 0 chr5 35653592 35653663 -163976487 + AT_rich Low_complexity Low_complexity 1 29 0 3848 246 59 77 chr5 35655362 35655602 -163974548 + L1M4 LINE L1 16 259 -6283 2168 87 0 13 chr5 35655602 35655734 -163974416 + AluY SINE Alu 1 133 -178 216 0 0 0 chr5 35655734 35655758 -163974392 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2168 87 0 13 chr5 35655758 35655925 -163974225 + AluY SINE Alu 133 296 -15 3848 246 59 77 chr5 35655925 35656744 -163973406 + L1M4 LINE L1 259 1035 -5507 458 110 0 14 chr5 35656744 35656817 -163973333 - MADE1 DNA Mariner -4 76 5 3848 246 59 77 chr5 35656817 35657445 -163972705 + L1M4 LINE L1 1035 1673 -4869 29 28 0 0 chr5 35659642 35659678 -163970472 + AT_rich Low_complexity Low_complexity 1 36 0 272 272 54 22 chr5 35659678 35659770 -163970380 + MIR SINE MIR 168 262 0 1101 225 9 0 chr5 35660385 35660607 -163969543 - AluJo SINE Alu -2 310 87 204 222 0 0 chr5 35661703 35661739 -163968411 + polypurine Low_complexity Low_complexity 5 40 0 23 0 0 0 chr5 35663337 35663360 -163966790 + AT_rich Low_complexity Low_complexity 1 23 0 617 248 0 0 chr5 35665348 35665481 -163964669 + FLAM_A SINE Alu 1 133 0 29 70 0 0 chr5 35666943 35667000 -163963150 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr5 35667043 35667065 -163963085 + AT_rich Low_complexity Low_complexity 1 22 0 2588 175 34 1 chr5 35667192 35667810 -163962340 + L1P4 LINE L1 4821 5455 -710 1168 287 65 81 chr5 35668045 35668919 -163961231 + MER89-int LTR ERV1 147 1006 -5795 2123 107 0 49 chr5 35669335 35669661 -163960489 + AluSx SINE Alu 1 310 -2 196 349 115 65 chr5 35669902 35670346 -163959804 - L2 LINE L2 -1122 2192 1727 2126 103 0 4 chr5 35670351 35670664 -163959486 + AluSc SINE Alu 1 312 0 894 232 172 22 chr5 35671105 35671555 -163958595 - L1ME2 LINE L1 -100 6064 5457 27 49 0 0 chr5 35671776 35671817 -163958333 + AT_rich Low_complexity Low_complexity 1 41 0 920 286 94 23 chr5 35671820 35672426 -163957724 - L1ME2 LINE L1 -1043 5103 4455 215 149 92 11 chr5 35672526 35672613 -163957537 + (TA)n Simple_repeat Simple_repeat 1 94 0 21 36 0 0 chr5 35673162 35673190 -163956960 + AT_rich Low_complexity Low_complexity 1 28 0 308 198 0 23 chr5 35673417 35673503 -163956647 + (TATG)n Simple_repeat Simple_repeat 4 87 0 186 191 0 0 chr5 35673521 35673563 -163956587 + (CA)n Simple_repeat Simple_repeat 1 42 0 1585 177 10 11 chr5 35673653 35674109 -163956041 + L1M2 LINE L1 5083 5536 -744 711 150 29 14 chr5 35674214 35674354 -163955796 + L1M2 LINE L1 5535 5676 -621 * 1064 136 23 0 chr5 35674349 35674526 -163955624 + L1M2 LINE L1 5553 5733 -564 27 29 0 0 chr5 35675216 35675250 -163954900 + AT_rich Low_complexity Low_complexity 1 34 0 1965 109 26 22 chr5 35675286 35675598 -163954552 - AluSp SINE Alu 0 313 1 679 290 16 57 chr5 35676410 35676655 -163953495 + MIR SINE MIR 20 254 -8 1088 296 83 8 chr5 35678152 35678514 -163951636 - MLT1H LTR MaLR -4 545 157 34 55 0 0 chr5 35678628 35678683 -163951467 + AT_rich Low_complexity Low_complexity 1 55 0 1952 114 3 3 chr5 35678705 35679003 -163951147 - L1PB1 LINE L1 -4 6147 5850 485 44 17 0 chr5 35679004 35679079 -163951071 + L1MC/D LINE L1 5371 5451 -719 1497 168 59 3 chr5 35679143 35679447 -163950703 + L1MC1 LINE L1 6011 6331 -2 1335 250 140 29 chr5 35679544 35680159 -163949991 - L1ME1 LINE L1 -229 6006 5324 683 231 87 108 chr5 35681888 35682404 -163947746 - L1ME1 LINE L1 -893 5322 4818 1570 163 71 52 chr5 35682436 35682804 -163947346 - THE1C LTR MaLR 0 375 1 8638 132 52 35 chr5 35682804 35684358 -163945792 - THE1C-int LTR MaLR 0 1580 2 1019 170 41 32 chr5 35684359 35684577 -163945573 - THE1C LTR MaLR 0 375 156 4112 131 11 0 chr5 35684579 35685219 -163944931 - L1PA8A LINE L1 -1949 4197 3551 6751 151 33 5 chr5 35685219 35687118 -163943032 + L1PA8A LINE L1 4197 6128 -3 861 138 127 14 chr5 35687120 35687292 -163942858 - THE1C LTR MaLR -164 191 1 489 263 141 5 chr5 35687292 35687505 -163942645 - L1ME1 LINE L1 -1430 4785 4544 536 288 68 0 chr5 35687525 35687702 -163942448 - L1ME1 LINE L1 -6093 303 115 428 316 84 60 chr5 35689064 35689549 -163940601 + HAL1 LINE L1 956 1452 -1055 455 313 61 49 chr5 35689852 35690104 -163940046 + MLT1G1 LTR MaLR 1 240 -309 961 169 57 0 chr5 35791743 35791920 -163838230 - MSTA LTR MaLR 0 428 242 1577 127 0 0 chr5 35792140 35792360 -163837790 + AluSx SINE Alu 35 254 -58 1388 187 20 12 chr5 35792701 35792952 -163837198 - MSTA LTR MaLR -175 253 1 6298 221 39 32 chr5 35793674 35795403 -163834747 + L1P LINE L1 2375 4114 -2032 236 98 49 0 chr5 35795506 35795547 -163834603 - Alu SINE Alu -256 45 3 2040 121 0 0 chr5 35795568 35795858 -163834292 + AluSq SINE Alu 4 293 -20 22 0 0 0 chr5 35795858 35795880 -163834270 + AT_rich Low_complexity Low_complexity 1 22 0 398 277 9 27 chr5 35797138 35797250 -163832900 - L2 LINE L2 -2 3311 3202 1312 200 22 82 chr5 35797396 35797811 -163832339 - MLT1B LTR MaLR 0 390 1 4850 151 32 62 chr5 35797953 35798772 -163831378 - L1PA15 LINE L1 -6 6159 5317 3587 60 6 0 chr5 35798772 35799239 -163830911 + L1PA7 LINE L1 5683 6152 -2 4850 151 32 62 chr5 35799239 35799592 -163830558 - L1PA15 LINE L1 -848 5317 5005 1835 83 4 29 chr5 35799592 35799869 -163830281 - L1PA13 LINE L1 -3 6160 5891 4850 151 32 62 chr5 35799869 35799969 -163830181 - L1PA15 LINE L1 -1160 5005 4904 318 67 0 0 chr5 35800372 35800417 -163829733 + (TA)n Simple_repeat Simple_repeat 2 46 0 186 341 68 11 chr5 35800454 35800542 -163829608 - L3b LINE CR1 -9 1574 1482 624 256 10 50 chr5 35800995 35801194 -163828956 + MLT1D LTR MaLR 1 191 -314 1295 242 11 55 chr5 35801312 35801692 -163828458 + MLT1B LTR MaLR 28 390 0 611 224 166 27 chr5 35801692 35801915 -163828235 + MLT1D LTR MaLR 252 505 0 2279 58 7 0 chr5 35802397 35802674 -163827476 + AluY SINE Alu 24 302 -9 261 346 55 0 chr5 35803025 35803152 -163826998 + MLT1I LTR MaLR 6 139 -270 284 223 54 6 chr5 35803157 35803284 -163826866 + MER2 DNA MER2_type 1 205 -140 429 171 26 0 chr5 35803332 35803408 -163826742 + MER2 DNA MER2_type 267 344 -1 357 298 42 59 chr5 35803415 35803653 -163826497 + MLT1I LTR MaLR 154 387 -22 200 221 0 15 chr5 35804119 35804187 -163825963 + CT-rich Low_complexity Low_complexity 2 68 0 22 35 0 0 chr5 35804675 35804704 -163825446 + AT_rich Low_complexity Low_complexity 1 29 0 2128 132 16 0 chr5 35805097 35805401 -163824749 - AluSg1 SINE Alu 0 309 1 895 119 0 0 chr5 35805483 35805617 -163824533 + L1PA16 LINE L1 6033 6166 0 59 75 0 7 chr5 35805976 35806021 -163824129 + AT_rich Low_complexity Low_complexity 1 45 -101 1672 137 0 8 chr5 35806021 35806277 -163823873 + AluSx SINE Alu 35 288 -24 59 75 0 7 chr5 35806277 35806378 -163823772 + AT_rich Low_complexity Low_complexity 45 146 0 285 338 108 79 chr5 35806583 35807177 -163822973 + L2 LINE L2 2355 2965 -349 375 328 70 5 chr5 35807481 35807667 -163822483 + MER67A LTR ERV1 346 543 0 941 174 22 121 chr5 35807788 35808176 -163821974 - LTR37A LTR ERV1 0 426 1 243 366 45 36 chr5 35808255 35808367 -163821783 + L2 LINE L2 3158 3270 -2 1096 211 104 47 chr5 35808388 35808791 -163821359 + LTR56 LTR ERV1 20 445 0 2165 81 0 3 chr5 35808934 35809241 -163820909 - AluY SINE Alu 0 306 1 234 105 0 0 chr5 35809645 35809683 -163820467 + (TG)n Simple_repeat Simple_repeat 1 38 0 953 266 125 68 chr5 35809785 35810289 -163819861 - MLT1H LTR MaLR -14 535 3 270 314 0 0 chr5 35810389 35810475 -163819675 - MER63 DNA MER1_type -285 777 692 1086 158 19 0 chr5 35811120 35811329 -163818821 + L1MA8 LINE L1 6074 6286 -5 818 158 42 37 chr5 35811330 35811520 -163818630 - L1MA9 LINE L1 -29 6283 6093 2007 147 0 6 chr5 35811872 35812186 -163817964 + AluSx SINE Alu 1 312 0 23 33 0 0 chr5 35812291 35812321 -163817829 + AT_rich Low_complexity Low_complexity 1 30 0 201 147 0 0 chr5 35812403 35812437 -163817713 + (A)n Simple_repeat Simple_repeat 1 34 0 241 218 18 0 chr5 35812591 35812646 -163817504 + (TA)n Simple_repeat Simple_repeat 2 57 0 256 277 10 10 chr5 35813634 35813735 -163816415 + (CA)n Simple_repeat Simple_repeat 2 102 0 2262 90 10 0 chr5 35814434 35814724 -163815426 + AluSg SINE Alu 1 293 -17 426 56 0 0 chr5 35815251 35815305 -163814845 + THE1C LTR MaLR 1 54 -321 379 273 49 14 chr5 35817409 35817552 -163812598 - MLT1E LTR MaLR 0 593 446 2162 206 51 11 chr5 35817598 35817683 -163812467 - L1 LINE L1 -1296 4850 4770 207 88 0 0 chr5 35817683 35817717 -163812433 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2162 206 51 11 chr5 35817717 35818179 -163811971 - L1 LINE L1 -1376 4770 4281 * 2727 148 97 28 chr5 35818174 35818713 -163811437 + L1PB4 LINE L1 5581 6156 0 801 336 30 57 chr5 35818734 35819171 -163810979 - MLT1E LTR MaLR -147 446 22 1650 74 35 0 chr5 35819780 35820010 -163810140 + MER75B DNA T2_type 1 238 -5 1725 182 13 50 chr5 35820231 35820610 -163809540 - MLT1A1 LTR MaLR 0 365 1 266 0 29 0 chr5 35821439 35821473 -163808677 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1198 231 45 34 chr5 35822149 35822497 -163807653 + MLT1A1 LTR MaLR 11 467 0 25 0 0 0 chr5 35823436 35823461 -163806689 + AT_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr5 35823726 35823765 -163806385 + AT_rich Low_complexity Low_complexity 1 39 0 372 270 42 42 chr5 35823965 35824154 -163805996 - MER112 DNA MER1_type -5 255 67 1576 136 18 4 chr5 35824853 35825133 -163805017 - L1MA4 LINE L1 -4 6296 6013 2720 3 0 3 chr5 35825170 35825471 -163804679 + AluYa5 SINE Alu 1 300 -11 5599 120 11 15 chr5 35825613 35826008 -163804142 - L1PA11 LINE L1 0 6174 5779 4628 127 3 9 chr5 35826008 35826703 -163803447 - LTR8 LTR ERV1 0 691 1 5599 120 11 15 chr5 35826703 35828077 -163802073 - L1PA11 LINE L1 -395 5779 4432 633 192 354 28 chr5 35828601 35828718 -163801432 + MLT1A2 LTR MaLR 1 79 -349 2058 90 40 13 chr5 35828718 35829018 -163801132 - AluSq SINE Alu -5 308 1 633 192 354 28 chr5 35829018 35829181 -163800969 + MLT1A2 LTR MaLR 79 428 0 28 0 0 0 chr5 35829184 35829212 -163800938 + AT_rich Low_complexity Low_complexity 1 28 0 1688 259 75 47 chr5 35829657 35830620 -163799530 + L1M4 LINE L1 3702 4691 -1455 1177 225 51 18 chr5 35830959 35831292 -163798858 - MER2 DNA MER2_type 0 344 1 21 0 0 0 chr5 35831620 35831641 -163798509 + AT_rich Low_complexity Low_complexity 1 21 0 407 356 77 49 chr5 35832082 35832615 -163797535 - L2 LINE L2 -1067 2247 1700 194 373 107 40 chr5 35833465 35833615 -163796535 + MIR SINE MIR 62 221 -41 184 418 20 0 chr5 35834528 35834626 -163795524 + MIR SINE MIR 48 147 -115 535 272 8 62 chr5 35835449 35835703 -163794447 + MLT1E LTR MaLR 1 240 -327 2007 167 20 41 chr5 35835873 35836263 -163793887 + MSTB LTR MaLR 45 426 0 536 256 36 0 chr5 35836288 35836425 -163793725 + MLT1F1 LTR MaLR 426 567 0 215 348 191 15 chr5 35837183 35837387 -163792763 - L3 LINE CR1 -93 1484 1245 1205 303 52 32 chr5 35838849 35839350 -163790800 + LTR40a LTR ERVL 1 511 -8 22 56 0 0 chr5 35839958 35839994 -163790156 + AT_rich Low_complexity Low_complexity 1 36 0 357 274 122 57 chr5 35840022 35840252 -163789898 + L1M4 LINE L1 2929 3173 -2973 181 136 23 23 chr5 35840254 35840298 -163789852 + GA-rich Low_complexity Low_complexity 1 44 0 3552 133 27 2 chr5 35840311 35840866 -163789284 - MER61E LTR ERV1 0 569 1 237 221 15 0 chr5 35840871 35840939 -163789211 + L1M4 LINE L1 3191 3259 -2887 30 59 0 0 chr5 35841155 35841206 -163788944 + AT_rich Low_complexity Low_complexity 1 51 0 452 223 27 18 chr5 35841300 35841412 -163788738 + MER4C LTR ERV1 1 113 -352 410 196 11 22 chr5 35841501 35841593 -163788557 + LTR34 LTR ERV1 429 519 -180 667 250 28 11 chr5 35841627 35841807 -163788343 + MER4C LTR ERV1 283 465 0 3990 182 11 4 chr5 35842517 35843222 -163786928 - MER50 LTR ERV1 -24 710 1 27 49 0 0 chr5 35843561 35843602 -163786548 + AT_rich Low_complexity Low_complexity 1 41 0 1128 128 12 0 chr5 35844238 35844410 -163785740 - AluSg/x SINE Alu -12 300 127 1647 132 24 28 chr5 35844410 35844698 -163785452 + MER44D DNA MER2_type 53 609 0 294 353 43 7 chr5 35844701 35844840 -163785310 - MIR SINE MIR -113 149 6 1041 64 57 0 chr5 35844841 35844981 -163785169 - AluY SINE Alu -6 305 158 294 91 0 0 chr5 35845082 35845126 -163785024 + L1P LINE L1 4424 4467 -1679 44 35 0 0 chr5 35845172 35845230 -163784920 + AT_rich Low_complexity Low_complexity 1 58 0 186 118 0 0 chr5 35846218 35846252 -163783898 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 242 318 61 61 chr5 35846366 35846514 -163783636 + L2 LINE L2 3159 3306 -7 285 255 0 43 chr5 35847294 35847388 -163782762 + L1MC4 LINE L1 6614 6703 -1339 261 250 0 0 chr5 35847388 35847464 -163782686 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 236 313 38 0 chr5 35847517 35847597 -163782553 - MIR SINE MIR -54 208 126 436 338 43 23 chr5 35847928 35848227 -163781923 + MLT1I LTR MaLR 97 401 -8 24 67 0 0 chr5 35848406 35848451 -163781699 + AT_rich Low_complexity Low_complexity 1 45 0 22 56 0 0 chr5 35848861 35848897 -163781253 + AT_rich Low_complexity Low_complexity 1 36 0 277 43 43 0 chr5 35852241 35852288 -163777862 + (CTATT)n Simple_repeat Simple_repeat 2 50 0 337 230 54 0 chr5 35852680 35852753 -163777397 + MER63 DNA MER1_type 27 729 -107 1235 226 130 31 chr5 35852753 35853169 -163776981 + MLT1C LTR MaLR 3 459 -8 419 244 7 7 chr5 35853169 35853285 -163776865 + MER63 DNA MER1_type 715 1055 -6 231 122 0 0 chr5 35853581 35853622 -163776528 - L1MA4A LINE L1 -7 6296 6256 186 71 0 0 chr5 35853921 35853949 -163776201 + (TA)n Simple_repeat Simple_repeat 1 28 0 352 358 130 12 chr5 35854146 35854476 -163775674 - L1ME LINE L1 -501 5663 5295 641 225 8 0 chr5 35855241 35855370 -163774780 - FLAM_A SINE Alu -3 130 1 29 0 0 0 chr5 35855372 35855401 -163774749 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 35855455 35855484 -163774666 + AT_rich Low_complexity Low_complexity 1 29 0 6306 34 0 0 chr5 35856404 35857151 -163772999 - L1PA4 LINE L1 -8 6147 5401 1944 117 0 18 chr5 35857233 35857515 -163772635 + AluSg SINE Alu 1 277 -33 1181 51 17 11 chr5 35857517 35857692 -163772458 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 22 56 0 0 chr5 35860138 35860174 -163769976 + AT_rich Low_complexity Low_complexity 1 36 0 681 322 98 42 chr5 35861217 35861425 -163768725 - LTR16C LTR ERVL -1 490 295 2255 140 89 8 chr5 35861425 35861819 -163768331 + MSTA LTR MaLR 3 428 0 681 322 98 42 chr5 35861819 35861989 -163768161 - LTR16C LTR ERVL -196 295 91 24 53 0 0 chr5 35862722 35862760 -163767390 + AT_rich Low_complexity Low_complexity 1 38 0 2145 110 3 0 chr5 35863134 35863435 -163766715 - AluSc SINE Alu -7 302 1 434 218 109 27 chr5 35864119 35864266 -163765884 + MLT1H LTR MaLR 1 159 -390 2274 78 10 3 chr5 35864508 35864817 -163765333 + AluY SINE Alu 1 311 0 2053 178 38 59 chr5 35864913 35865390 -163764760 - MLT1C LTR MaLR 0 467 1 414 211 92 0 chr5 35865400 35865509 -163764641 - MLT1H LTR MaLR -5 544 426 338 310 91 21 chr5 35865619 35865806 -163764344 + L2 LINE L2 3098 3297 -16 218 138 77 15 chr5 35865828 35865893 -163764257 + (TTAA)n Simple_repeat Simple_repeat 3 71 0 261 185 15 31 chr5 35868244 35868309 -163761841 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 22 0 0 0 chr5 35869381 35869403 -163760747 + AT_rich Low_complexity Low_complexity 1 22 0 675 205 0 0 chr5 35869787 35869914 -163760236 + FLAM_A SINE Alu 4 130 -3 218 96 0 96 chr5 35869917 35869969 -163760181 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1938 130 31 0 chr5 35870138 35870431 -163759719 + AluSx SINE Alu 1 302 -10 186 103 0 0 chr5 35870859 35870885 -163759265 + (CA)n Simple_repeat Simple_repeat 1 55 0 186 103 0 0 chr5 35870885 35870914 -163759236 + (CA)n Simple_repeat Simple_repeat 2 30 0 1769 209 58 78 chr5 35872515 35872909 -163757241 + MLT1D LTR MaLR 3 386 -119 1474 204 81 20 chr5 35872909 35873253 -163756897 - MLT1A1 LTR MaLR 0 365 1 1769 209 58 78 chr5 35873253 35873371 -163756779 + MLT1D LTR MaLR 386 505 0 1687 190 0 3 chr5 35873573 35873862 -163756288 + AluJb SINE Alu 3 290 -22 21 0 0 0 chr5 35874361 35874382 -163755768 + AT_rich Low_complexity Low_complexity 1 21 0 248 0 31 0 chr5 35874514 35874546 -163755604 + (TG)n Simple_repeat Simple_repeat 2 34 0 429 268 17 84 chr5 35874954 35875133 -163755017 + MLT1F LTR MaLR 4 170 -372 225 65 0 0 chr5 35875490 35875521 -163754629 + (TG)n Simple_repeat Simple_repeat 2 32 0 416 19 19 0 chr5 35876341 35876394 -163753756 + (TG)n Simple_repeat Simple_repeat 2 55 0 1995 181 33 44 chr5 35876395 35876949 -163753201 + MLT2A2 LTR ERVL 3 554 0 1776 32 9 0 chr5 35879046 35879266 -163750884 + L1PA4 LINE L1 5929 6150 -5 22 35 0 0 chr5 35879645 35879674 -163750476 + AT_rich Low_complexity Low_complexity 1 29 0 367 300 80 45 chr5 35882099 35882416 -163747734 + L1MC/D LINE L1 5283 5609 -512 41 93 0 0 chr5 35882428 35882546 -163747604 + AT_rich Low_complexity Low_complexity 1 118 0 232 302 10 10 chr5 35882562 35882658 -163747492 + L1MC/D LINE L1 5711 5806 -2002 2865 145 57 32 chr5 35882665 35883306 -163746844 + L1P5 LINE L1 5084 5780 -376 242 57 0 0 chr5 35883301 35883336 -163746814 - L1P4 LINE L1 -477 5686 5652 * 1378 124 0 0 chr5 35883347 35883548 -163746602 + L1PB4 LINE L1 5580 5780 -376 * 2354 77 3 6 chr5 35883543 35883740 -163746410 - L1P4 LINE L1 -477 5686 5489 2153 102 0 55 chr5 35883740 35884065 -163746085 - AluSg SINE Alu -3 307 1 2354 77 3 6 chr5 35884065 35884192 -163745958 - L1P4 LINE L1 -674 5489 5363 3273 96 4 18 chr5 35884192 35884679 -163745471 + L1PA13 LINE L1 5676 6157 -6 1788 199 0 37 chr5 35884688 35884725 -163745425 + L1PB4 LINE L1 5769 5806 -350 210 91 0 0 chr5 35884725 35884758 -163745392 + (CA)n Simple_repeat Simple_repeat 2 34 0 1788 199 0 37 chr5 35884758 35885122 -163745028 + L1PB4 LINE L1 5806 6155 -1 298 151 27 0 chr5 35886443 35886516 -163743634 + (TG)n Simple_repeat Simple_repeat 2 76 0 24 0 0 0 chr5 35886516 35886540 -163743610 + AT_rich Low_complexity Low_complexity 1 24 0 228 143 0 0 chr5 35886540 35886582 -163743568 + (CA)n Simple_repeat Simple_repeat 2 43 0 260 89 0 22 chr5 35887610 35887655 -163742495 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4746 56 0 0 chr5 35888002 35888591 -163741559 + L1PA7 LINE L1 5560 6148 -6 2007 135 3 26 chr5 35889567 35889871 -163740279 + AluSx SINE Alu 2 298 -14 208 221 26 13 chr5 35891740 35891817 -163738333 + (TA)n Simple_repeat Simple_repeat 1 78 0 435 194 23 11 chr5 35891837 35892012 -163738138 + (TA)n Simple_repeat Simple_repeat 2 178 0 1278 169 20 8 chr5 35892369 35892618 -163737532 - Tigger2a DNA MER2_type -2 432 181 962 169 5 51 chr5 35892670 35892865 -163737285 - Tigger2a DNA MER2_type -248 186 1 691 140 2 2 chr5 35893473 35893598 -163736552 - LTR38B LTR ERV1 -12 599 476 2282 154 0 5 chr5 35893598 35893974 -163736176 - LTR38B LTR ERV1 -236 374 1 333 305 67 79 chr5 35894918 35895324 -163734826 + MLT1J1 LTR MaLR 24 424 -22 180 111 0 0 chr5 35895711 35895738 -163734412 + (CA)n Simple_repeat Simple_repeat 2 28 0 383 283 69 25 chr5 35895881 35896157 -163733993 + L1M4 LINE L1 4116 4403 -1743 1781 199 5 28 chr5 35896477 35896874 -163733276 - L1PA16 LINE L1 0 6166 5779 1618 225 35 39 chr5 35896960 35897423 -163732727 - L1ME2 LINE L1 -8 6156 5696 1118 288 90 36 chr5 35897425 35898528 -163731622 + L1P4 LINE L1 4396 5562 -612 288 224 0 0 chr5 35898625 35898692 -163731458 + (TG)n Simple_repeat Simple_repeat 2 68 0 1021 321 54 6 chr5 35898692 35899193 -163730957 + L1ME3A LINE L1 5609 6133 -37 1036 278 48 68 chr5 35899579 35899988 -163730162 - LTR40a LTR ERVL -9 510 112 2382 62 0 37 chr5 35899988 35900310 -163729840 + AluY SINE Alu 1 310 -1 1036 278 48 68 chr5 35900310 35900418 -163729732 - LTR40a LTR ERVL -407 112 3 879 296 41 13 chr5 35900451 35900843 -163729307 + L1M4 LINE L1 3543 3945 -2201 548 248 291 21 chr5 35900850 35901418 -163728732 + Zaphod DNA AcHobo 297 1017 -3014 300 249 210 28 chr5 35901418 35901599 -163728551 + Zaphod DNA AcHobo 3818 4031 0 23 33 0 0 chr5 35901723 35901753 -163728397 + AT_rich Low_complexity Low_complexity 1 30 0 245 114 23 0 chr5 35901753 35901797 -163728353 - L1PB2 LINE L1 -2 6149 6105 2048 112 25 109 chr5 35901800 35902194 -163727956 + THE1B LTR MaLR 4 364 0 1035 177 57 104 chr5 35902211 35902527 -163727623 - AluJb SINE Alu 0 302 2 9225 196 20 61 chr5 35902544 35902845 -163727305 - L1PA16 LINE L1 -74 6808 6496 2034 123 3 10 chr5 35902845 35903154 -163726996 - AluSc SINE Alu -2 307 1 9225 196 20 61 chr5 35903154 35903205 -163726945 - L1PA16 LINE L1 -386 6496 6444 524 40 158 0 chr5 35903205 35903281 -163726869 - AluY SINE Alu -13 298 211 9225 196 20 61 chr5 35903281 35903975 -163726175 - L1PA16 LINE L1 -438 6444 5723 2096 126 0 0 chr5 35903975 35904269 -163725881 - AluSc SINE Alu -15 294 1 9225 196 20 61 chr5 35904269 35905365 -163724785 - L1PA16 LINE L1 -1159 5723 4830 2462 71 0 0 chr5 35905365 35905676 -163724474 - AluY SINE Alu 0 311 1 9225 196 20 61 chr5 35905676 35906945 -163723205 - L1PA16 LINE L1 -2052 4830 3510 329 282 97 46 chr5 35906923 35907139 -163723011 - L1PA16 LINE L1 -6114 749 523 * 1571 163 58 79 chr5 35907146 35907526 -163722624 + THE1C LTR MaLR 4 375 0 1674 220 21 13 chr5 35907530 35907917 -163722233 - L1PA16 LINE L1 -6347 516 127 380 317 17 0 chr5 35908049 35908169 -163721981 - MER94 DNA DNA -1 133 12 510 319 109 22 chr5 35908728 35909149 -163721001 + MLT1K LTR MaLR 85 561 -27 195 100 0 0 chr5 35910940 35910970 -163719180 + (T)n Simple_repeat Simple_repeat 1 30 0 192 214 0 0 chr5 35911609 35911665 -163718485 + (TG)n Simple_repeat Simple_repeat 1 56 0 1901 155 3 3 chr5 35911799 35912102 -163718048 - AluSx SINE Alu -9 303 1 37 0 0 0 chr5 35912208 35912245 -163717905 + AT_rich Low_complexity Low_complexity 1 37 0 1910 131 14 3 chr5 35912251 35912548 -163717602 + AluSq SINE Alu 1 300 -13 27 0 0 0 chr5 35914199 35914226 -163715924 + AT_rich Low_complexity Low_complexity 1 27 0 590 305 32 0 chr5 35914561 35914807 -163715343 - L1MC5 LINE L1 -48 7913 7660 519 212 53 99 chr5 35914818 35915120 -163715030 - L1MC5 LINE L1 -589 7372 7085 226 341 64 6 chr5 35915208 35915381 -163714769 - L1MC4a LINE L1 -1063 6745 6563 23 54 0 0 chr5 35915740 35915777 -163714373 + AT_rich Low_complexity Low_complexity 1 37 0 335 200 18 27 chr5 35916455 35916565 -163713585 - L1MD3 LINE L1 0 7995 7887 2379 58 0 23 chr5 35916643 35916953 -163713197 + AluY SINE Alu 1 303 -8 26 64 0 0 chr5 35917005 35917052 -163713098 + AT_rich Low_complexity Low_complexity 1 47 0 1900 113 47 0 chr5 35917293 35917567 -163712583 - AluSg SINE Alu -23 287 1 351 216 14 0 chr5 35917799 35917873 -163712277 - L1PB4 LINE L1 -3 6153 6079 184 75 25 25 chr5 35918091 35918131 -163712019 + (TA)n Simple_repeat Simple_repeat 1 40 0 252 0 0 0 chr5 35918689 35918717 -163711433 + (TA)n Simple_repeat Simple_repeat 1 28 0 329 143 0 16 chr5 35918717 35918780 -163711370 + (CA)n Simple_repeat Simple_repeat 1 62 0 233 233 0 0 chr5 35918780 35918823 -163711327 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 276 281 0 0 chr5 35918826 35918915 -163711235 + L1MC4 LINE L1 6615 6703 -1339 275 315 148 0 chr5 35919459 35919602 -163710548 + MIR SINE MIR 37 198 -64 244 325 0 0 chr5 35922392 35922475 -163707675 + L1ME1 LINE L1 6079 6161 -5 475 277 120 16 chr5 35922932 35923116 -163707034 - MER3 DNA MER1_type -5 204 2 681 215 76 5 chr5 35924356 35924579 -163705571 + Charlie5 DNA MER1_type 2348 2586 -26 1315 231 36 23 chr5 35925496 35925799 -163704351 - MLT1A1 LTR MaLR -57 308 2 588 263 24 14 chr5 35925816 35926025 -163704125 + L1MC3 LINE L1 4455 4665 -1481 6832 221 46 40 chr5 35926025 35927771 -163702379 + L1MC3 LINE L1 4942 6719 -1066 1777 152 54 0 chr5 35927771 35928067 -163702083 + AluSx SINE Alu 1 312 0 6832 221 46 40 chr5 35928067 35928638 -163701512 + L1MC3 LINE L1 6719 7285 -500 852 191 24 0 chr5 35928673 35928841 -163701309 + Tigger4(Zombi) DNA MER2_type 435 606 -2125 * 1555 144 22 7 chr5 35928837 35929114 -163701036 + Tigger4(Zombi) DNA MER2_type 2450 2730 -1 4254 26 0 0 chr5 35929115 35929651 -163700499 + L1PA4 LINE L1 5639 6174 0 912 219 64 112 chr5 35929656 35930049 -163700101 - MLT1A2 LTR MaLR 0 374 1 421 211 32 11 chr5 35930049 35930144 -163700006 + L1MC3 LINE L1 7682 7778 -7 310 272 96 103 chr5 35930281 35930729 -163699421 + L1MEc LINE L1 1113 1557 -4839 22 0 0 0 chr5 35930845 35930867 -163699283 + AT_rich Low_complexity Low_complexity 1 22 0 228 274 120 69 chr5 35932144 35932319 -163697831 + MLT1J LTR MaLR 1 184 -327 314 333 38 19 chr5 35932364 35932523 -163697627 + MLT1J2 LTR MaLR 266 427 -23 509 288 103 92 chr5 35932776 35932961 -163697189 + L1MEc LINE L1 3278 3459 -2756 2248 53 3 3 chr5 35932961 35933275 -163696875 + AluSc SINE Alu 1 314 0 509 288 103 92 chr5 35933275 35933699 -163696451 + L1MEc LINE L1 3459 3895 -2320 306 50 0 0 chr5 35935377 35935417 -163694733 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 1535 164 26 58 chr5 35936399 35936711 -163693439 - AluJo SINE Alu -10 302 1 196 353 39 45 chr5 35937158 35937314 -163692836 - MIR SINE MIR -73 189 35 1007 149 0 0 chr5 35937714 35937875 -163692275 - AluJb SINE Alu -7 305 145 241 67 0 0 chr5 35937876 35937906 -163692244 - Alu SINE Alu -128 172 143 428 231 125 0 chr5 35937931 35938035 -163692115 - AluJo SINE Alu -131 181 65 25 0 0 0 chr5 35938978 35939003 -163691147 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr5 35939300 35939328 -163690822 + AT_rich Low_complexity Low_complexity 1 28 0 606 28 0 0 chr5 35940766 35940838 -163689312 + (GA)n Simple_repeat Simple_repeat 1 72 0 337 274 48 48 chr5 35943507 35943631 -163686519 - MIR SINE MIR -50 212 89 21 0 0 0 chr5 35944008 35944029 -163686121 + AT_rich Low_complexity Low_complexity 1 21 0 214 191 0 0 chr5 35944606 35944648 -163685502 + T-rich Low_complexity Low_complexity 1 42 0 255 260 74 107 chr5 35945967 35946027 -163684123 - MIR SINE MIR -55 207 147 955 62 78 0 chr5 35946027 35946155 -163683995 + MER85 DNA T2_type 1 138 -1 255 260 74 107 chr5 35946155 35946288 -163683862 - MIR SINE MIR -115 147 16 281 186 0 71 chr5 35946714 35946784 -163683366 + MER53 DNA DNA 2 66 -123 234 0 0 0 chr5 35946786 35946812 -163683338 + (CA)n Simple_repeat Simple_repeat 1 26 0 1462 179 157 0 chr5 35946812 35947125 -163683025 - MER47A DNA MER2_type -4 362 1 309 51 0 0 chr5 35947127 35947166 -163682984 + (CA)n Simple_repeat Simple_repeat 2 40 0 203 220 20 0 chr5 35947270 35947320 -163682830 + (TA)n Simple_repeat Simple_repeat 1 51 0 340 150 0 0 chr5 35947320 35947380 -163682770 + MER53 DNA DNA 129 188 -1 243 61 0 0 chr5 35948722 35948755 -163681395 + (TA)n Simple_repeat Simple_repeat 2 34 0 293 196 36 0 chr5 35948765 35948821 -163681329 + MER94 DNA DNA 30 87 -47 24 32 0 0 chr5 35949071 35949102 -163681048 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 35949440 35949469 -163680681 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 35949612 35949640 -163680510 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr5 35950854 35950885 -163679265 + AT_rich Low_complexity Low_complexity 1 31 0 2218 60 4 4 chr5 35951943 35952267 -163677883 - AluY SINE Alu 0 324 1 912 187 0 0 chr5 35952327 35952508 -163677642 - AluJb SINE Alu 0 315 135 311 312 91 71 chr5 35952523 35952831 -163677319 + L2 LINE L2 1871 2184 -1130 2383 80 0 3 chr5 35953695 35954007 -163676143 - AluY SINE Alu 0 311 1 23 33 0 0 chr5 35954028 35954058 -163676092 + AT_rich Low_complexity Low_complexity 1 30 0 538 213 17 104 chr5 35954205 35954435 -163675715 - L1MA9 LINE L1 -42 6270 6061 211 272 99 25 chr5 35955499 35955580 -163674570 - MER5A DNA MER1_type -68 121 35 200 306 174 0 chr5 35955866 35955987 -163674163 - MIR SINE MIR -119 143 2 439 331 68 37 chr5 35956143 35956466 -163673684 + LTR16A LTR ERVL 117 449 -1 2411 67 0 0 chr5 35956842 35957142 -163673008 - AluY SINE Alu -11 300 1 295 145 29 0 chr5 35957868 35957937 -163672213 + (TA)n Simple_repeat Simple_repeat 2 72 0 2019 102 0 11 chr5 35958097 35958405 -163671745 + AluSx SINE Alu 1 305 0 278 315 254 14 chr5 35958415 35958777 -163671373 + L3 LINE CR1 456 904 -673 234 157 29 14 chr5 35958778 35958848 -163671302 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 212 299 156 49 chr5 35958853 35959077 -163671073 + L3 LINE CR1 937 1184 -393 21 0 0 0 chr5 35959446 35959467 -163670683 + AT_rich Low_complexity Low_complexity 1 21 0 2402 77 0 3 chr5 35960824 35961134 -163669016 - AluSg SINE Alu -1 309 1 2365 92 0 25 chr5 35961982 35962299 -163667851 - AluSc SINE Alu 0 309 1 198 283 0 0 chr5 35964833 35964879 -163665271 + L2 LINE L2 3141 3186 -86 288 0 0 0 chr5 35965124 35965156 -163664994 + (TG)n Simple_repeat Simple_repeat 2 33 0 264 381 15 0 chr5 35965934 35966068 -163664082 - MIR SINE MIR -114 148 13 2038 80 83 0 chr5 35967045 35967333 -163662817 + AluSp SINE Alu 1 312 -1 919 226 116 81 chr5 35967958 35968117 -163662033 + MSTD LTR MaLR 1 153 -243 2165 126 3 0 chr5 35968117 35968418 -163661732 + AluSx SINE Alu 1 302 -10 919 226 116 81 chr5 35968418 35968630 -163661520 + MSTD LTR MaLR 153 385 -11 1509 271 31 35 chr5 35969431 35969952 -163660198 - LTR40a LTR ERVL 0 519 1 262 299 8 8 chr5 35970976 35971110 -163659040 + (TA)n Simple_repeat Simple_repeat 2 135 0 183 184 0 0 chr5 35971808 35971846 -163658304 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1949 122 3 11 chr5 35972431 35972718 -163657432 + AluSq SINE Alu 1 285 -28 279 223 0 0 chr5 35972718 35972830 -163657320 + (TA)n Simple_repeat Simple_repeat 1 112 0 903 121 57 0 chr5 35972903 35973024 -163657126 + AluSq/x SINE Alu 1 132 -180 189 74 0 0 chr5 35973024 35973051 -163657099 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 903 121 57 0 chr5 35973051 35973069 -163657081 + AluSq/x SINE Alu 132 148 -164 192 77 0 0 chr5 35973090 35973116 -163657034 + (A)n Simple_repeat Simple_repeat 1 26 0 34 0 0 0 chr5 35973246 35973280 -163656870 + AT_rich Low_complexity Low_complexity 1 34 0 237 308 96 19 chr5 35975140 35975244 -163654906 - MIR3 SINE MIR -31 177 66 282 268 71 16 chr5 35975706 35975833 -163654317 - L2 LINE L2 -1205 2109 1976 24 32 0 0 chr5 35976538 35976569 -163653581 + AT_rich Low_complexity Low_complexity 1 31 0 7835 33 0 0 chr5 35976723 35977660 -163652490 - L1PA4 LINE L1 -1819 4327 3391 8645 38 2 0 chr5 35977660 35979495 -163650655 + L1PA4 LINE L1 4304 6153 -2 1779 151 16 31 chr5 35980431 35980748 -163649402 - AluSx SINE Alu 0 312 1 1093 204 30 15 chr5 35980758 35981022 -163649128 + L1PA16 LINE L1 5881 6148 -18 1648 136 35 91 chr5 35982208 35982383 -163647767 + THE1C LTR MaLR 1 184 -191 2133 124 3 3 chr5 35982383 35982682 -163647468 - AluSq SINE Alu -14 299 1 1648 136 35 91 chr5 35982682 35982903 -163647247 + THE1C LTR MaLR 184 375 0 4169 118 72 58 chr5 35982903 35983675 -163646475 + THE1C-int LTR MaLR 1 783 -797 24 32 0 0 chr5 35983848 35983879 -163646271 + AT_rich Low_complexity Low_complexity 1 31 0 245 322 59 0 chr5 35984079 35984231 -163645919 - L1M4 LINE L1 -1721 4425 4265 338 299 28 33 chr5 35984448 35984662 -163645488 - L1M4 LINE L1 -2480 3666 3454 197 0 71 0 chr5 35984665 35984693 -163645457 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 948 173 0 0 chr5 35984695 35984845 -163645305 - AluJb SINE Alu -29 283 134 301 276 102 41 chr5 35985005 35985418 -163644732 - L1M4 LINE L1 -2853 3293 2856 16900 58 3 4 chr5 35985423 35988415 -163641735 - L1PA6 LINE L1 -6 6148 3157 1555 240 82 38 chr5 35988416 35989101 -163641049 - L1MC/D LINE L1 -568 5860 5137 307 313 73 8 chr5 35989227 35989486 -163640664 - L1MC/D LINE L1 -5039 1357 1082 23 33 0 0 chr5 35989641 35989671 -163640479 + AT_rich Low_complexity Low_complexity 1 30 0 25 65 0 0 chr5 35989715 35989761 -163640389 + AT_rich Low_complexity Low_complexity 1 46 0 1936 157 51 32 chr5 35989918 35990461 -163639689 + MLT2A2 LTR ERVL 3 554 0 599 277 110 16 chr5 35990477 35990764 -163639386 + MER57A LTR ERV1 102 403 0 1470 245 122 30 chr5 35991069 35991608 -163638542 + MLT1E LTR MaLR 5 593 0 207 0 0 0 chr5 35993451 35993474 -163636676 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 528 276 98 59 chr5 35993872 35994157 -163635993 + L1M4 LINE L1 4412 4685 -1461 2151 119 0 0 chr5 35994157 35994460 -163635690 + AluSx SINE Alu 2 304 -8 528 276 98 59 chr5 35994460 35995118 -163635032 + L1M4 LINE L1 4685 5391 -755 40 49 0 0 chr5 35995838 35995899 -163634251 + AT_rich Low_complexity Low_complexity 1 61 0 24 0 0 0 chr5 35996024 35996048 -163634102 + AT_rich Low_complexity Low_complexity 1 24 0 2429 45 0 0 chr5 35996296 35996587 -163633563 - AluY SINE Alu -20 291 1 23 33 0 0 chr5 35997451 35997481 -163632669 + AT_rich Low_complexity Low_complexity 1 30 0 26 82 0 0 chr5 35998971 35999032 -163631118 + AT_rich Low_complexity Low_complexity 1 61 0 36 53 0 0 chr5 36000017 36000074 -163630076 + AT_rich Low_complexity Low_complexity 1 57 0 1541 273 110 46 chr5 36000695 36001958 -163628192 + L1ME1 LINE L1 3783 5142 -1004 3718 48 0 0 chr5 36001974 36002434 -163627716 - L1PA4 LINE L1 -3 6152 5693 1635 70 0 0 chr5 36002434 36002647 -163627503 - L1P LINE L1 -5933 213 1 1002 230 111 19 chr5 36002703 36003151 -163626999 + L1ME1 LINE L1 5184 5674 -743 237 33 0 0 chr5 36003152 36003182 -163626968 + (CA)n Simple_repeat Simple_repeat 1 30 0 984 126 0 26 chr5 36003188 36003339 -163626811 + AluSq/x SINE Alu 1 147 -166 236 200 62 0 chr5 36003548 36003613 -163626537 + L1ME1 LINE L1 6079 6147 -19 1656 318 98 52 chr5 36004082 36005462 -163624688 - L2 LINE L2 -566 2748 1306 1546 271 31 35 chr5 36006196 36006738 -163623412 + MLT1F LTR MaLR 3 542 0 218 313 24 24 chr5 36007577 36007660 -163622490 - L2 LINE L2 0 3272 3190 287 264 126 78 chr5 36008142 36008184 -163621966 + MER5B DNA MER1_type 1 40 -138 570 206 188 6 chr5 36008184 36008344 -163621806 - MER5A DNA MER1_type 0 189 1 287 264 126 78 chr5 36008344 36008468 -163621682 + MER5B DNA MER1_type 40 175 -3 960 244 75 54 chr5 36008521 36008907 -163621243 + MLT2D LTR ERVL 1 394 -20 202 114 0 29 chr5 36008970 36009005 -163621145 + (CA)n Simple_repeat Simple_repeat 1 34 0 590 213 9 0 chr5 36009699 36009807 -163620343 + MLT1E2 LTR MaLR 438 546 -80 26 30 0 0 chr5 36010067 36010100 -163620050 + AT_rich Low_complexity Low_complexity 1 33 0 1869 99 179 13 chr5 36011102 36011414 -163618736 - THE1B LTR MaLR 0 364 1 9845 114 35 35 chr5 36011414 36012994 -163617156 - THE1B-int LTR MaLR 0 1580 1 2645 88 11 6 chr5 36012994 36013356 -163616794 - THE1B LTR MaLR 0 364 1 2860 230 44 13 chr5 36013675 36014458 -163615692 + L1MB7 LINE L1 5375 6175 -9 25 65 0 0 chr5 36015960 36016006 -163614144 + AT_rich Low_complexity Low_complexity 1 46 0 313 242 91 111 chr5 36016163 36016361 -163613789 + MLT1H LTR MaLR 141 334 -215 21 0 0 0 chr5 36017018 36017039 -163613111 + AT_rich Low_complexity Low_complexity 1 21 0 630 339 122 35 chr5 36017156 36018105 -163612045 - L2 LINE L2 -845 2469 1438 180 0 0 0 chr5 36019025 36019045 -163611105 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 25 51 0 0 chr5 36019157 36019196 -163610954 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr5 36019607 36019628 -163610522 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 36019813 36019838 -163610312 + AT_rich Low_complexity Low_complexity 1 25 0 689 312 23 0 chr5 36020045 36020256 -163609894 - MIR SINE MIR -8 254 40 2110 99 24 0 chr5 36020271 36020565 -163609585 - AluSq SINE Alu -12 301 1 2127 173 57 2 chr5 36020606 36021010 -163609140 + MSTB LTR MaLR 1 426 0 548 214 23 12 chr5 36021126 36021299 -163608851 + GA-rich Low_complexity Low_complexity 3 177 0 189 278 37 0 chr5 36021386 36021440 -163608710 - L2 LINE L2 -225 3047 2992 200 188 0 0 chr5 36021612 36021644 -163608506 + polypurine Low_complexity Low_complexity 4 35 0 5980 29 0 0 chr5 36021749 36022451 -163607699 - L1PA4 LINE L1 -8 6147 5446 354 288 144 6 chr5 36022899 36023059 -163607091 + MIR SINE MIR 32 213 -49 426 54 0 0 chr5 36024841 36024897 -163605253 + L1PA3 LINE L1 6097 6152 -3 25 0 0 0 chr5 36024897 36024922 -163605228 + AT_rich Low_complexity Low_complexity 1 25 0 1714 173 27 10 chr5 36025114 36025414 -163604736 - AluJb SINE Alu -7 305 1 1343 166 0 0 chr5 36025825 36026042 -163604108 + AluSq SINE Alu 78 294 -19 29 0 0 0 chr5 36026327 36026356 -163603794 + AT_rich Low_complexity Low_complexity 1 29 0 1276 120 0 0 chr5 36026617 36026817 -163603333 + L1PB1 LINE L1 1 200 -6663 10182 154 45 13 chr5 36026819 36030372 -163599778 + L1PB1 LINE L1 636 4445 -2417 1119 227 3 13 chr5 36030401 36030709 -163599441 - L1 LINE L1 -2726 3420 3116 7118 172 16 4 chr5 36030724 36033132 -163597018 + L1PB1 LINE L1 4427 6858 -9 183 369 57 16 chr5 36033238 36033360 -163596790 + MIR3 SINE MIR 79 205 -3 244 259 17 0 chr5 36034773 36034831 -163595319 + MIR SINE MIR 96 154 -108 10709 194 33 8 chr5 36035117 36037122 -163593028 + L1MA3 LINE L1 1 2057 -5508 5290 149 17 13 chr5 36037112 36037868 -163592282 + L1MA3 LINE L1 6319 7086 -638 * 2083 124 53 31 chr5 36037868 36038224 -163591926 - THE1B LTR MaLR 0 364 1 5290 149 17 13 chr5 36038224 36038690 -163591460 + L1MA3 LINE L1 7086 7549 -175 616 183 63 0 chr5 36039567 36039693 -163590457 - MER20 DNA MER1_type 0 219 86 923 267 33 28 chr5 36039693 36040052 -163590098 + MLT1A1 LTR MaLR 1 361 -4 916 247 4 38 chr5 36040063 36040326 -163589824 + MLT1A2 LTR MaLR 121 374 0 299 244 0 47 chr5 36040330 36040416 -163589734 - MER20 DNA MER1_type -135 84 3 180 291 38 25 chr5 36040637 36040716 -163589434 + L2 LINE L2 2777 2856 -458 318 167 0 0 chr5 36040898 36040952 -163589198 + MLT2D LTR ERVL 1 54 -360 206 216 0 0 chr5 36041034 36041071 -163589079 + (TG)n Simple_repeat Simple_repeat 2 38 0 321 189 0 27 chr5 36041142 36041216 -163588934 - L1MA4 LINE L1 -200 6100 6029 780 160 80 17 chr5 36041218 36041393 -163588757 + L1MA4 LINE L1 6114 6299 -1 347 281 116 18 chr5 36042272 36042436 -163587714 - MIR SINE MIR -13 249 70 312 330 10 0 chr5 36042508 36042608 -163587542 - MIR SINE MIR -10 252 152 27 29 0 0 chr5 36043246 36043280 -163586870 + AT_rich Low_complexity Low_complexity 1 34 0 1046 211 144 28 chr5 36044311 36044638 -163585512 - MLT1A1 LTR MaLR 0 365 1 2380 65 0 0 chr5 36045098 36045391 -163584759 - AluY SINE Alu -18 293 1 1959 98 8 0 chr5 36046579 36046844 -163583306 + AluSg SINE Alu 6 272 -38 216 0 0 0 chr5 36046846 36046870 -163583280 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 405 234 80 29 chr5 36046918 36047093 -163583057 + MER53 DNA DNA 3 186 -3 239 222 12 37 chr5 36047235 36047316 -163582834 + MER116 DNA Mariner 1 79 -1 359 296 101 12 chr5 36047489 36047658 -163582492 - MLT1C LTR MaLR 0 467 284 531 331 0 12 chr5 36047680 36047843 -163582307 - ERVL LTR ERVL -5210 554 394 4507 184 22 13 chr5 36047898 36049119 -163581031 + L1MA6 LINE L1 4977 6209 -91 288 145 49 8 chr5 36049100 36049181 -163580969 + L1MA7 LINE L1 6223 6312 0 * 1101 228 14 83 chr5 36049182 36049585 -163580565 + MLT1D-int LTR MaLR 1010 1728 -7 542 244 175 72 chr5 36049660 36050009 -163580141 + MLT1D LTR MaLR 118 502 -3 195 346 20 20 chr5 36051734 36051835 -163578315 - L3 LINE CR1 -729 848 748 468 116 45 80 chr5 36051837 36051949 -163578201 - L1MA5 LINE L1 0 6300 6193 27 29 0 0 chr5 36052381 36052415 -163577735 + AT_rich Low_complexity Low_complexity 1 34 0 719 299 48 0 chr5 36052430 36052637 -163577513 - MIR SINE MIR -44 218 2 277 278 11 22 chr5 36053958 36054048 -163576102 + (TATATG)n Simple_repeat Simple_repeat 6 94 0 22 0 0 0 chr5 36054051 36054073 -163576077 + AT_rich Low_complexity Low_complexity 1 22 0 834 152 0 14 chr5 36056479 36056624 -163573526 + FLAM_C SINE Alu 1 143 0 917 207 0 0 chr5 36056647 36056821 -163573329 + AluJb SINE Alu 122 295 -17 24 0 0 0 chr5 36056965 36056989 -163573161 + AT_rich Low_complexity Low_complexity 1 24 0 377 267 81 105 chr5 36057709 36057967 -163572183 + MIR SINE MIR 5 256 -6 6543 161 14 11 chr5 36058007 36059029 -163571121 - L1PA11 LINE L1 0 6174 5157 435 152 13 0 chr5 36059029 36059108 -163571042 - MADE1 DNA Mariner 0 80 1 6543 161 14 11 chr5 36059108 36060120 -163570030 - L1PA11 LINE L1 -1017 5157 4130 4266 181 12 21 chr5 36060120 36060970 -163569180 + L1P LINE L1 1889 2730 -3416 305 310 43 9 chr5 36061324 36061440 -163568710 - L2 LINE L2 0 3313 3194 275 328 148 55 chr5 36061432 36061998 -163568152 + L2 LINE L2 2673 3268 -4 * 24 53 0 0 chr5 36062187 36062225 -163567925 + AT_rich Low_complexity Low_complexity 1 38 0 474 88 0 0 chr5 36062284 36062352 -163567798 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 23 68 0 0 chr5 36063645 36063689 -163566461 + AT_rich Low_complexity Low_complexity 1 44 0 284 68 0 23 chr5 36063992 36064036 -163566114 + (TAGA)n Simple_repeat Simple_repeat 1 43 0 4069 196 21 14 chr5 36064479 36065343 -163564807 - L1MB1 LINE L1 -3 6165 5296 587 220 0 9 chr5 36065348 36065574 -163564576 + CT-rich Low_complexity Low_complexity 1 223 0 2564 254 21 12 chr5 36065578 36065958 -163564192 - L1MB1 LINE L1 -847 5299 4924 1793 128 33 4 chr5 36065958 36066264 -163563886 - AluSg SINE Alu 0 314 1 2564 254 21 12 chr5 36066264 36066627 -163563523 - L1MB1 LINE L1 -1222 4924 4548 1733 197 52 17 chr5 36066642 36067108 -163563042 + L1M4 LINE L1 4026 4507 -1639 353 215 43 0 chr5 36067109 36067202 -163562948 + L1M4 LINE L1 4444 4540 -1606 1689 92 5 0 chr5 36067231 36067449 -163562701 + AluSg/x SINE Alu 77 295 -17 1044 235 165 54 chr5 36068709 36069222 -163560928 + MLT1F1 LTR MaLR 3 567 0 21 0 0 0 chr5 36070832 36070853 -163559297 + AT_rich Low_complexity Low_complexity 1 21 0 215 265 0 0 chr5 36070959 36071008 -163559142 + (TA)n Simple_repeat Simple_repeat 1 49 0 2111 67 60 20 chr5 36071430 36071729 -163558421 + AluY SINE Alu 1 311 0 2336 46 13 3 chr5 36071868 36072173 -163557977 + L1PA5 LINE L1 5847 6154 0 232 314 66 8 chr5 36072828 36072949 -163557201 + L1MB3 LINE L1 101 228 -6314 27 0 0 0 chr5 36073367 36073394 -163556756 + AT_rich Low_complexity Low_complexity 1 27 0 193 366 204 0 chr5 36073512 36073605 -163556545 + L2 LINE L2 3142 3253 -19 292 202 0 48 chr5 36074072 36074156 -163555994 + L1MC4 LINE L1 6624 6703 -1339 3030 234 73 36 chr5 36074778 36075855 -163554295 + L1MB3 LINE L1 3891 5007 -1637 285 133 0 11 chr5 36075877 36075952 -163554198 + L1MB3 LINE L1 5788 5860 -809 2648 227 45 18 chr5 36075962 36076099 -163554051 + L1MB3 LINE L1 5971 6103 -578 2080 128 3 3 chr5 36076099 36076412 -163553738 + AluSq SINE Alu 1 313 0 2648 227 45 18 chr5 36076412 36076957 -163553193 + L1MB3 LINE L1 6103 6672 -9 226 136 51 0 chr5 36077216 36077275 -163552875 + (TAAA)n Simple_repeat Simple_repeat 4 65 0 423 0 0 0 chr5 36077947 36077994 -163552156 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 78 0 0 chr5 36078729 36078780 -163551370 + AT_rich Low_complexity Low_complexity 1 51 0 25 65 0 0 chr5 36078824 36078870 -163551280 + AT_rich Low_complexity Low_complexity 1 46 0 238 355 32 8 chr5 36079014 36079138 -163551012 + L1M4 LINE L1 608 734 -5900 262 298 64 64 chr5 36079901 36080681 -163549469 + L1M4 LINE L1 1407 2229 -4596 26 88 0 0 chr5 36080863 36080931 -163549219 + AT_rich Low_complexity Low_complexity 1 68 0 563 302 76 44 chr5 36081192 36081811 -163548339 + L1M4 LINE L1 2764 3402 -3242 186 43 0 0 chr5 36082696 36082719 -163547431 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 23 0 0 0 chr5 36084250 36084273 -163545877 + AT_rich Low_complexity Low_complexity 1 23 0 447 19 0 0 chr5 36085363 36085415 -163544735 + (TG)n Simple_repeat Simple_repeat 1 52 0 2120 89 3 24 chr5 36086287 36086579 -163543571 + AluSg SINE Alu 1 286 -24 312 248 38 48 chr5 36087234 36087339 -163542811 - L1MC4 LINE L1 -1357 6685 6582 31 44 0 0 chr5 36087784 36087829 -163542321 + AT_rich Low_complexity Low_complexity 1 45 0 2225 107 0 3 chr5 36088294 36088594 -163541556 + AluSc SINE Alu 1 299 -10 3487 176 34 9 chr5 36088801 36089500 -163540650 - L1MC1 LINE L1 -1 6332 5616 23 0 0 0 chr5 36089581 36089604 -163540546 + AT_rich Low_complexity Low_complexity 1 23 0 264 357 48 16 chr5 36089994 36090120 -163540030 - MER5A DNA MER1_type -3 186 57 1377 207 48 88 chr5 36090130 36090507 -163539643 - MLT1A2 LTR MaLR -4 370 9 2030 148 0 0 chr5 36091629 36091933 -163538217 - AluSx SINE Alu -8 304 1 298 280 30 30 chr5 36092097 36092197 -163537953 + MER5A DNA MER1_type 83 182 -7 25 51 0 0 chr5 36092427 36092466 -163537684 + AT_rich Low_complexity Low_complexity 1 39 0 23 68 0 0 chr5 36093291 36093335 -163536815 + AT_rich Low_complexity Low_complexity 1 44 0 21 71 0 0 chr5 36093407 36093449 -163536701 + AT_rich Low_complexity Low_complexity 1 42 0 249 247 41 0 chr5 36093939 36094012 -163536138 + GA-rich Low_complexity Low_complexity 2 77 0 368 192 14 14 chr5 36094359 36094432 -163535718 - Tigger5 DNA MER2_type 0 2323 2251 840 201 193 4 chr5 36094650 36094899 -163535251 - L1MB1 LINE L1 -648 5664 5369 * 1513 158 32 13 chr5 36094898 36095272 -163534878 + L1MB1 LINE L1 5646 6168 0 577 309 65 86 chr5 36095871 36096347 -163533803 + MLT1H1 LTR MaLR 8 473 -82 204 219 0 0 chr5 36096477 36096518 -163533632 + CT-rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr5 36097177 36097200 -163532950 + AT_rich Low_complexity Low_complexity 1 23 0 1925 125 7 0 chr5 36097413 36097736 -163532414 - AluSq SINE Alu 0 325 1 272 288 68 17 chr5 36098080 36098198 -163531952 - LTR16A LTR ERVL -324 126 3 226 268 197 56 chr5 36098359 36098501 -163531649 - L2 LINE L2 0 3313 3152 380 260 10 30 chr5 36098745 36098845 -163531305 + L2 LINE L2 3168 3265 -48 1277 215 86 38 chr5 36098865 36099146 -163531004 - MLT1C LTR MaLR -29 438 129 1874 143 58 12 chr5 36099146 36099474 -163530676 + MER61A LTR ERV1 1 343 0 1277 215 86 38 chr5 36099474 36099610 -163530540 - MLT1C LTR MaLR -338 129 1 236 246 149 118 chr5 36100013 36100208 -163529942 - L2 LINE L2 0 3313 3113 1470 239 104 73 chr5 36100247 36101148 -163529002 - MER63C DNA MER1_type -1 929 1 1648 334 133 16 chr5 36101163 36101429 -163528721 - L2 LINE L2 -284 2988 2755 2000 138 39 30 chr5 36101429 36101790 -163528360 + THE1B LTR MaLR 1 364 0 1648 334 133 16 chr5 36101790 36102495 -163527655 - L2 LINE L2 -517 2755 1909 286 353 106 17 chr5 36102590 36102825 -163527325 - L2 LINE L2 -814 2500 2245 2074 129 0 16 chr5 36103353 36103670 -163526480 - AluSx SINE Alu 0 312 1 180 0 0 0 chr5 36103904 36103924 -163526226 + (TG)n Simple_repeat Simple_repeat 2 21 0 24 0 0 0 chr5 36105057 36105081 -163525069 + AT_rich Low_complexity Low_complexity 1 24 0 189 343 71 18 chr5 36105390 36105559 -163524591 + MIR SINE MIR 69 246 -16 27 87 0 0 chr5 36106890 36106959 -163523191 + AT_rich Low_complexity Low_complexity 1 69 0 1771 172 0 13 chr5 36107046 36107360 -163522790 - AluJb SINE Alu -2 310 1 554 296 73 29 chr5 36107748 36107954 -163522196 + MIR SINE MIR 12 226 -36 2234 109 3 3 chr5 36108083 36108396 -163521754 + AluSp SINE Alu 1 313 0 207 0 0 0 chr5 36109051 36109074 -163521076 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 203 267 17 0 chr5 36109106 36109166 -163520984 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 506 227 21 0 chr5 36109652 36109793 -163520357 - L1MA8 LINE L1 -3 6288 6145 30 83 0 0 chr5 36110023 36110095 -163520055 + AT_rich Low_complexity Low_complexity 1 72 0 463 137 32 0 chr5 36110530 36110625 -163519525 + CT-rich Low_complexity Low_complexity 3 100 0 508 207 0 9 chr5 36110629 36110745 -163519405 - L1MA8 LINE L1 -5 6286 6172 1369 221 57 90 chr5 36110900 36111376 -163518774 + MER31B LTR ERV1 1 460 -6 202 257 9 179 chr5 36111377 36111595 -163518555 + L2 LINE L2 3133 3313 0 521 347 85 28 chr5 36112036 36112388 -163517762 + L1M4c LINE L1 175 546 -5767 2249 77 10 22 chr5 36112418 36112731 -163517419 - AluY SINE Alu -2 309 1 1333 275 70 7 chr5 36113245 36113989 -163516161 + L1M4c LINE L1 1426 2322 -4060 * 8096 215 39 40 chr5 36113986 36117435 -163512715 + L1MA9 LINE L1 2850 6311 -1 643 336 34 0 chr5 36118330 36118565 -163511585 + MIR SINE MIR 10 252 -10 341 331 113 7 chr5 36118598 36118970 -163511180 - L2 LINE L2 -175 3138 2725 422 323 55 89 chr5 36119363 36119688 -163510462 - L2 LINE L2 -609 2705 2392 27 22 0 22 chr5 36119760 36119780 -163510370 + AT_rich Low_complexity Low_complexity 1 20 -24 2173 92 0 24 chr5 36119780 36120072 -163510078 - AluSg SINE Alu -25 285 1 27 22 0 22 chr5 36120072 36120096 -163510054 + AT_rich Low_complexity Low_complexity 20 44 0 2160 101 6 31 chr5 36120672 36120989 -163509161 + AluSc SINE Alu 1 309 0 1841 166 0 0 chr5 36121559 36121860 -163508290 + AluSx SINE Alu 1 301 -11 26 0 0 0 chr5 36124683 36124709 -163505441 + AT_rich Low_complexity Low_complexity 1 26 0 284 320 109 0 chr5 36125233 36125361 -163504789 + MIR SINE MIR 18 159 -103 29 84 0 0 chr5 36125510 36125581 -163504569 + AT_rich Low_complexity Low_complexity 1 71 0 514 99 0 12 chr5 36126538 36126619 -163503531 + MADE1 DNA Mariner 1 80 0 2137 193 92 43 chr5 36127837 36128580 -163501570 - LTR1B LTR ERV1 0 785 9 228 222 0 0 chr5 36128645 36128690 -163501460 + L1MC4 LINE L1 6662 6706 -1336 23 0 0 0 chr5 36128856 36128879 -163501271 + AT_rich Low_complexity Low_complexity 1 23 0 213 39 0 0 chr5 36129409 36129435 -163500715 + (T)n Simple_repeat Simple_repeat 1 26 0 210 118 0 0 chr5 36130275 36130309 -163499841 + (TC)n Simple_repeat Simple_repeat 2 35 0 23 0 0 0 chr5 36131710 36131733 -163498417 + AT_rich Low_complexity Low_complexity 1 23 0 1628 69 0 0 chr5 36132077 36132293 -163497857 - L1PA4 LINE L1 0 6155 5940 1967 26 0 0 chr5 36132293 36132527 -163497623 + L1PA4 LINE L1 5711 5944 -211 24 0 0 0 chr5 36132541 36132565 -163497585 + AT_rich Low_complexity Low_complexity 1 24 0 1519 212 16 43 chr5 36132962 36133334 -163496816 + MLT1A1 LTR MaLR 4 365 0 716 213 19 0 chr5 36134231 36134386 -163495764 + MLT1E2 LTR MaLR 468 625 -1 28 29 0 0 chr5 36134869 36134904 -163495246 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr5 36135031 36135056 -163495094 + AT_rich Low_complexity Low_complexity 1 25 0 184 294 35 71 chr5 36136039 36136124 -163494026 + L2 LINE L2 1398 1479 -1835 25 31 0 0 chr5 36137168 36137200 -163492950 + AT_rich Low_complexity Low_complexity 1 32 0 274 319 132 75 chr5 36137712 36138113 -163492037 + L3 LINE CR1 572 995 -582 398 331 23 12 chr5 36138115 36138287 -163491863 - MIR SINE MIR -3 259 86 210 315 19 37 chr5 36138269 36138377 -163491773 + L2 LINE L2 3199 3304 -9 * 26 0 0 0 chr5 36138483 36138509 -163491641 + AT_rich Low_complexity Low_complexity 1 26 0 1303 209 59 0 chr5 36139505 36139655 -163490495 - AluJo SINE Alu -22 290 150 381 22 0 0 chr5 36139655 36139701 -163490449 + (TTA)n Simple_repeat Simple_repeat 2 47 0 1303 209 59 0 chr5 36139701 36139823 -163490327 - AluJo SINE Alu -162 150 2 24 0 0 0 chr5 36140254 36140278 -163489872 + AT_rich Low_complexity Low_complexity 1 24 0 22 80 0 0 chr5 36140768 36140818 -163489332 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 36140853 36140874 -163489276 + AT_rich Low_complexity Low_complexity 1 21 0 276 30 0 0 chr5 36140922 36140955 -163489195 + (CA)n Simple_repeat Simple_repeat 2 34 0 383 107 27 70 chr5 36142528 36142715 -163487435 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 2127 112 7 0 chr5 36142719 36143006 -163487144 - AluSp SINE Alu -24 289 1 201 167 0 0 chr5 36143274 36143310 -163486840 + A-rich Low_complexity Low_complexity 5 40 0 365 259 0 24 chr5 36143331 36143416 -163486734 - MER5A DNA MER1_type -88 101 19 293 299 96 46 chr5 36143864 36144061 -163486089 - L2 LINE L2 -483 2831 2625 207 383 91 44 chr5 36144129 36144536 -163485614 - L2 LINE L2 -654 2660 2235 327 356 94 7 chr5 36145663 36145812 -163484338 + MIR SINE MIR 70 231 -31 473 316 37 16 chr5 36147166 36147356 -163482794 - MIR SINE MIR -55 207 14 6673 118 31 12 chr5 36148355 36149393 -163480757 - MER11C LTR ERVK -14 1057 1 1657 177 24 3 chr5 36149424 36149763 -163480387 + L1PA15 LINE L1 1985 2330 -4509 2144 219 88 55 chr5 36149799 36150502 -163479648 + MER50 LTR ERV1 9 734 0 2764 219 3 9 chr5 36150505 36151175 -163478975 + L1PA15 LINE L1 2371 3038 -3811 8851 221 47 14 chr5 36151236 36154822 -163475328 + L1PA15 LINE L1 3041 6865 -3 24 0 0 0 chr5 36154866 36154890 -163475260 + AT_rich Low_complexity Low_complexity 1 24 0 421 310 54 5 chr5 36155256 36155440 -163474710 - L1ME LINE L1 -297 5824 5632 893 233 184 75 chr5 36155481 36156151 -163473999 + LTR50 LTR ERVL 14 756 -39 180 0 0 0 chr5 36156515 36156535 -163473615 + (TCTA)n Simple_repeat Simple_repeat 1 20 0 27 49 0 0 chr5 36157730 36157771 -163472379 + AT_rich Low_complexity Low_complexity 1 41 0 28 61 0 37 chr5 36157837 36157919 -163472231 + AT_rich Low_complexity Low_complexity 1 79 0 232 280 54 101 chr5 36158613 36158781 -163471369 - MLT1J2 LTR MaLR -25 425 266 273 241 38 0 chr5 36159121 36159200 -163470950 + LTR33A LTR ERVL 395 476 -47 387 273 146 6 chr5 36159246 36159411 -163470739 - MLT1J2 LTR MaLR -242 208 21 23 40 0 0 chr5 36160228 36160253 -163469897 + AT_rich Low_complexity Low_complexity 1 25 0 10625 219 46 53 chr5 36160311 36163451 -163466699 + L1MA4A LINE L1 2 3121 -3727 329 145 16 0 chr5 36163451 36163513 -163466637 + (TA)n Simple_repeat Simple_repeat 2 64 0 10086 200 30 11 chr5 36163514 36166649 -163463501 + L1MA4A LINE L1 3497 6692 -313 2131 127 3 0 chr5 36167021 36167320 -163462830 + AluSx SINE Alu 1 300 -12 300 27 0 0 chr5 36168056 36168093 -163462057 + (TG)n Simple_repeat Simple_repeat 2 38 0 512 101 0 0 chr5 36168225 36168294 -163461856 + Alu SINE Alu 226 294 -16 330 26 0 0 chr5 36169632 36169671 -163460479 + (TG)n Simple_repeat Simple_repeat 2 40 0 403 123 0 0 chr5 36169672 36169729 -163460421 - AluS SINE Alu -14 286 230 1637 107 5 0 chr5 36169731 36169955 -163460195 + AluSg/x SINE Alu 71 295 -17 1125 70 0 7 chr5 36169957 36170100 -163460050 - AluY SINE Alu -169 142 1 22 80 0 0 chr5 36171940 36171990 -163458160 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 36172089 36172110 -163458040 + AT_rich Low_complexity Low_complexity 1 21 0 1343 177 51 102 chr5 36172831 36173019 -163457131 + MLT1A1 LTR MaLR 1 162 -203 444 19 0 0 chr5 36173019 36173072 -163457078 + (TG)n Simple_repeat Simple_repeat 2 54 0 1343 177 51 102 chr5 36173072 36173256 -163456894 + MLT1A1 LTR MaLR 162 354 -11 740 201 0 0 chr5 36173257 36173396 -163456754 + L1PB4 LINE L1 6010 6148 -8 560 233 17 0 chr5 36173708 36173828 -163456322 - MER7A DNA MER2_type -226 120 1 2907 103 2 0 chr5 36175146 36175545 -163454605 + MER84 LTR ERVI 1 400 -107 1963 110 4 4 chr5 36175545 36175826 -163454324 - AluSx SINE Alu -2 310 30 280 125 21 0 chr5 36175926 36175974 -163454176 + AluSc SINE Alu 177 225 -74 2732 129 73 10 chr5 36175974 36176455 -163453695 + MER9 LTR ERVK 1 511 0 4361 95 11 52 chr5 36176455 36177150 -163453000 + HERVK9 LTR ERVK 1 667 -5249 * 26387 95 4 0 chr5 36177146 36180694 -163449456 + HERVK9 LTR ERVK 1626 5186 -730 564 329 4 0 chr5 36180668 36180911 -163449239 + HERVK9 LTR ERVK 5975 6218 -1735 * 3308 102 2 2 chr5 36180896 36181348 -163448802 + HERVK9 LTR ERVK 5183 5634 -282 2022 146 2 0 chr5 36181403 36181726 -163448424 + HERVK9 LTR ERVK 4936 5916 0 2837 110 73 12 chr5 36181726 36182208 -163447942 + MER9 LTR ERVK 1 511 0 330 175 0 0 chr5 36182209 36182297 -163447853 + AluS SINE Alu 223 310 0 437 161 75 11 chr5 36182297 36182390 -163447760 + MER84 LTR ERVI 409 507 0 1968 148 10 0 chr5 36182547 36182851 -163447299 + AluSq SINE Alu 1 307 -6 545 181 21 7 chr5 36182857 36183001 -163447149 + GA-rich Low_complexity Low_complexity 3 148 0 2099 120 3 3 chr5 36183114 36183413 -163446737 + AluSx SINE Alu 1 299 -13 208 274 200 32 chr5 36183594 36183689 -163446461 - L2 LINE L2 -12 3301 3191 27 49 0 0 chr5 36183942 36183983 -163446167 + AT_rich Low_complexity Low_complexity 1 41 0 229 233 0 0 chr5 36184072 36184115 -163446035 - L1PB4 LINE L1 -1405 4741 4699 4246 180 40 41 chr5 36184117 36184654 -163445496 + L1PB4 LINE L1 4744 5280 -876 255 31 0 0 chr5 36184654 36184686 -163445464 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4246 180 40 41 chr5 36184686 36185567 -163444583 + L1PB4 LINE L1 5280 6156 0 244 263 97 18 chr5 36185860 36185974 -163444176 + L1MC4 LINE L1 6568 6690 -1352 270 119 102 17 chr5 36186652 36186711 -163443439 - L1MB7 LINE L1 -9 6175 6112 24 0 0 0 chr5 36187888 36187912 -163442238 + AT_rich Low_complexity Low_complexity 1 24 0 786 201 54 25 chr5 36187919 36188123 -163442027 + MER6B DNA MER2_type 1 210 0 186 43 0 0 chr5 36188143 36188166 -163441984 + (TTA)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr5 36188936 36188958 -163441192 + AT_rich Low_complexity Low_complexity 1 22 0 2037 129 0 13 chr5 36189077 36189380 -163440770 - AluSx SINE Alu -13 299 1 27 0 0 65 chr5 36189623 36189669 -163440481 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr5 36190112 36190133 -163440017 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 36192685 36192707 -163437443 + AT_rich Low_complexity Low_complexity 1 22 0 759 50 25 25 chr5 36193107 36193228 -163436922 + (GAAA)n Simple_repeat Simple_repeat 2 122 0 291 149 40 0 chr5 36193895 36193969 -163436181 + (ATATG)n Simple_repeat Simple_repeat 1 77 0 1987 138 0 22 chr5 36195303 36195615 -163434535 - AluSx SINE Alu -7 305 1 1573 124 24 121 chr5 36196212 36196551 -163433599 + AluYb8 SINE Alu 3 308 -10 2502 242 110 24 chr5 36196839 36196962 -163433188 + L1MD2 LINE L1 5497 5608 -751 2085 117 16 3 chr5 36196962 36197271 -163432879 - AluSq SINE Alu 0 313 1 2502 242 110 24 chr5 36197271 36197753 -163432397 + L1MD2 LINE L1 5608 6186 -173 321 100 0 0 chr5 36197753 36197803 -163432347 + (CA)n Simple_repeat Simple_repeat 1 50 0 2502 242 110 24 chr5 36197803 36197978 -163432172 + L1MD2 LINE L1 6186 6345 -14 2469 61 0 0 chr5 36198190 36198487 -163431663 - AluY SINE Alu -14 297 1 2097 129 3 0 chr5 36198749 36199051 -163431099 + AluSp SINE Alu 1 303 -10 1372 229 57 25 chr5 36200024 36200378 -163429772 + MLT1A1 LTR MaLR 1 365 0 2097 212 24 7 chr5 36200432 36200889 -163429261 + MLT1C LTR MaLR 1 465 -2 211 209 0 0 chr5 36203226 36203269 -163426881 + CT-rich Low_complexity Low_complexity 2 44 0 288 267 218 33 chr5 36203269 36203572 -163426578 + LTR33A LTR ERVL 165 523 0 2329 156 86 6 chr5 36203684 36204428 -163425722 - Tigger4(Zombi) DNA MER2_type 0 2731 1876 2189 84 0 7 chr5 36204428 36204713 -163425437 + AluY SINE Alu 1 283 -28 475 214 0 0 chr5 36204733 36204817 -163425333 - Tigger4(Zombi) DNA MER2_type -2647 84 1 1749 191 0 0 chr5 36205074 36205368 -163424782 + AluJb SINE Alu 7 300 -12 1266 174 19 63 chr5 36205433 36205703 -163424447 + AluJo SINE Alu 16 273 -39 496 180 0 0 chr5 36205703 36205792 -163424358 + AluJ/FRAM SINE Alu 222 310 -2 3023 162 10 4 chr5 36205854 36206347 -163423803 + LTR28-int LTR ERV1 6595 7090 -1 4400 203 83 21 chr5 36206348 36207308 -163422842 + LTR28 LTR ERV1 1 1020 0 357 213 64 21 chr5 36208161 36208255 -163421895 - MLT1J2 LTR MaLR -24 426 329 2461 60 3 0 chr5 36208657 36208955 -163421195 - AluY SINE Alu -12 299 1 932 143 116 37 chr5 36209454 36209643 -163420507 + AluJb SINE Alu 86 289 -23 21 0 0 0 chr5 36211431 36211452 -163418698 + AT_rich Low_complexity Low_complexity 1 21 0 1171 141 5 28 chr5 36211963 36212176 -163417974 + L1PA12 LINE L1 5961 6168 0 310 338 56 15 chr5 36212497 36212695 -163417455 + MLT1H LTR MaLR 153 358 -191 307 281 11 11 chr5 36214375 36214464 -163415686 - L1MC4 LINE L1 -1340 6702 6614 241 244 0 44 chr5 36214499 36214589 -163415561 - L1MC4 LINE L1 -1339 6703 6618 288 0 0 0 chr5 36214591 36214623 -163415527 + (CA)n Simple_repeat Simple_repeat 1 32 0 946 203 57 33 chr5 36215024 36215236 -163414914 + MER20 DNA MER1_type 1 217 -2 210 208 0 0 chr5 36215644 36215697 -163414453 + (CA)n Simple_repeat Simple_repeat 2 54 0 210 37 0 0 chr5 36215995 36216022 -163414128 + (TC)n Simple_repeat Simple_repeat 1 27 0 607 312 28 37 chr5 36216641 36216859 -163413291 - MER58A DNA MER1_type -8 216 1 2116 127 0 6 chr5 36216899 36217213 -163412937 + AluSx SINE Alu 1 312 0 333 0 0 0 chr5 36217765 36217802 -163412348 + (CA)n Simple_repeat Simple_repeat 2 38 0 305 307 57 26 chr5 36218102 36218294 -163411856 - L1MEc LINE L1 -4929 1467 1270 258 105 0 0 chr5 36219170 36219208 -163410942 + (TA)n Simple_repeat Simple_repeat 2 39 0 310 333 77 16 chr5 36219532 36219715 -163410435 + MIR SINE MIR 23 216 -46 23 54 0 0 chr5 36220727 36220764 -163409386 + AT_rich Low_complexity Low_complexity 1 37 0 2458 46 0 16 chr5 36221088 36221395 -163408755 + AluY SINE Alu 1 302 -9 26 30 0 0 chr5 36222581 36222614 -163407536 + AT_rich Low_complexity Low_complexity 1 33 0 180 176 0 0 chr5 36222712 36222746 -163407404 + (TA)n Simple_repeat Simple_repeat 2 35 0 26 50 0 0 chr5 36223057 36223097 -163407053 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr5 36225044 36225075 -163405075 + AT_rich Low_complexity Low_complexity 1 31 0 1267 247 29 14 chr5 36225082 36225430 -163404720 + L1PBa LINE L1 8 360 -6503 9726 198 71 15 chr5 36225491 36228638 -163401512 + L1PBa LINE L1 620 4057 -2805 378 57 38 0 chr5 36228648 36228701 -163401449 - MLT2A2 LTR ERVL 0 453 399 253 246 0 0 chr5 36228669 36228734 -163401416 - LTR66 LTR ERVL -152 458 394 * 336 227 31 52 chr5 36228734 36228831 -163401319 - L1MC4 LINE L1 -1339 6703 6609 24 32 0 0 chr5 36228837 36228868 -163401282 + AT_rich Low_complexity Low_complexity 1 31 0 2873 89 20 5 chr5 36228888 36229282 -163400868 - MLT2A1 LTR ERVL -44 400 1 41476 87 13 5 chr5 36229282 36234829 -163395321 - HERVL-A1 LTR ERVL 0 5654 63 7116 52 3 9 chr5 36234832 36236513 -163393637 + L1PA6 LINE L1 4470 6144 -10 1254 343 49 10 chr5 36236522 36237117 -163393033 - L2 LINE L2 -690 2624 2007 2079 92 0 83 chr5 36237129 36237454 -163392696 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr5 36237690 36237711 -163392439 + AT_rich Low_complexity Low_complexity 1 21 0 292 202 0 48 chr5 36237889 36237973 -163392177 - L1MC4 LINE L1 -1339 6703 6624 193 366 204 0 chr5 36238440 36238533 -163391617 - L2 LINE L2 -19 3253 3142 27 0 0 0 chr5 36238651 36238678 -163391472 + AT_rich Low_complexity Low_complexity 1 27 0 2128 118 3 0 chr5 36239144 36239441 -163390709 - AluSx SINE Alu -14 298 1 285 350 72 46 chr5 36239543 36239892 -163390258 + L2 LINE L2 2419 2776 -538 45 34 0 0 chr5 36240263 36240322 -163389828 + AT_rich Low_complexity Low_complexity 1 59 0 242 295 48 24 chr5 36240441 36240607 -163389543 + L1MEc LINE L1 1810 1979 -4417 395 288 39 27 chr5 36240720 36240979 -163389171 + L1MEc LINE L1 1958 2267 -3988 2776 255 28 77 chr5 36240989 36242080 -163388070 + L1ME2 LINE L1 321 1357 -5498 2081 266 48 6 chr5 36242082 36242828 -163387322 + L1ME2 LINE L1 1558 2326 -4633 1150 235 86 12 chr5 36242840 36243451 -163386699 + L1ME2 LINE L1 5780 6426 -569 541 266 107 19 chr5 36243477 36243748 -163386402 + L1M4 LINE L1 4590 4884 -1262 494 234 48 125 chr5 36243932 36244180 -163385970 + MLT1F1-int LTR MaLR 972 1200 -171 294 270 61 9 chr5 36244282 36244397 -163385753 + MLT1F1-int LTR MaLR 1249 1369 -2 1449 214 75 77 chr5 36244401 36244936 -163385214 + MLT1F1 LTR MaLR 3 538 -29 385 283 35 14 chr5 36244959 36245104 -163385046 + L1ME2 LINE L1 6659 6806 -169 1314 199 124 68 chr5 36245471 36245883 -163384267 + MLT1D LTR MaLR 21 455 -50 408 311 38 8 chr5 36245934 36246066 -163384084 - MIR SINE MIR -108 154 19 276 241 52 17 chr5 36247333 36247507 -163382643 + (TA)n Simple_repeat Simple_repeat 1 180 0 784 289 31 22 chr5 36247956 36248181 -163381969 - MIR SINE MIR -8 254 28 654 210 6 12 chr5 36248753 36248915 -163381235 - L1P LINE L1 -918 5228 5068 6838 201 16 18 chr5 36248946 36251063 -163379087 - L1PA15 LINE L1 -45 6120 4010 2139 116 0 3 chr5 36251063 36251355 -163378795 - AluSx SINE Alu -21 291 1 6838 201 16 18 chr5 36251355 36251666 -163378484 - L1PA15 LINE L1 -2155 4010 3700 207 69 0 0 chr5 36251670 36251699 -163378451 + (TTG)n Simple_repeat Simple_repeat 1 29 0 306 210 16 0 chr5 36251799 36251861 -163378289 + AluJ/FRAM SINE Alu 218 280 -22 260 26 0 26 chr5 36251863 36251901 -163378249 + (TTAAA)n Simple_repeat Simple_repeat 3 39 0 738 210 53 84 chr5 36251945 36251994 -163378156 + MLT1A1 LTR MaLR 112 161 -204 1425 197 44 0 chr5 36251994 36252289 -163377861 + AluSx SINE Alu 5 312 0 738 210 53 84 chr5 36252289 36252501 -163377649 + MLT1A1 LTR MaLR 161 365 0 1714 171 57 84 chr5 36252738 36253178 -163376972 - MSTA LTR MaLR 0 428 1 317 274 65 81 chr5 36253484 36253670 -163376480 + L1MEd LINE L1 833 1015 -5104 2105 126 0 0 chr5 36254460 36254753 -163375397 + AluSq SINE Alu 13 305 -8 620 296 38 10 chr5 36255268 36255559 -163374591 + L1MEd LINE L1 3197 3495 -2634 702 306 37 33 chr5 36255560 36256014 -163374136 + L1MEd LINE L1 3881 4336 -1793 21 36 0 0 chr5 36256494 36256522 -163373628 + AT_rich Low_complexity Low_complexity 1 28 0 295 318 85 8 chr5 36256538 36256667 -163373483 - MIR SINE MIR -77 185 47 284 308 26 0 chr5 36257102 36257180 -163372970 - MLT1J LTR MaLR -317 194 115 21 36 0 0 chr5 36259021 36259049 -163371101 + AT_rich Low_complexity Low_complexity 1 28 0 1710 154 58 28 chr5 36259529 36259893 -163370257 - THE1C LTR MaLR 0 375 1 280 344 45 25 chr5 36260051 36260208 -163369942 + MIR SINE MIR 11 170 -92 195 321 54 62 chr5 36260657 36260769 -163369381 + MIR SINE MIR 5 115 -147 268 248 248 0 chr5 36261363 36261464 -163368686 - MIR SINE MIR -13 249 124 1800 213 67 32 chr5 36262181 36262645 -163367505 + MER4E LTR ERV1 300 779 0 181 273 18 0 chr5 36262647 36262702 -163367448 + L2 LINE L2 3258 3313 0 210 174 0 43 chr5 36262774 36262820 -163367330 + L2 LINE L2 3257 3300 -13 2369 97 0 3 chr5 36262821 36263130 -163367020 + AluSp SINE Alu 1 308 -5 405 0 0 0 chr5 36263130 36263175 -163366975 + (TA)n Simple_repeat Simple_repeat 1 45 0 1745 111 12 4 chr5 36264657 36264909 -163365241 + AluSg SINE Alu 40 293 -17 279 161 0 0 chr5 36265256 36265312 -163364838 + (TA)n Simple_repeat Simple_repeat 1 56 0 258 369 34 13 chr5 36266237 36266386 -163363764 - L2 LINE L2 -941 2373 2222 441 0 0 0 chr5 36266559 36266608 -163363542 + (CA)n Simple_repeat Simple_repeat 2 50 0 2322 248 32 13 chr5 36267269 36267793 -163362357 + MLT2B3 LTR ERVL 1 534 -20 24 53 0 0 chr5 36269222 36269260 -163360890 + AT_rich Low_complexity Low_complexity 1 38 0 1390 234 132 55 chr5 36269375 36269845 -163360305 + MLT2B2 LTR ERVL 2 507 -8 1623 313 47 26 chr5 36270014 36270548 -163359602 + L1MDb LINE L1 7 551 -5858 3628 253 85 24 chr5 36270631 36272494 -163357656 + L1MDb LINE L1 668 2672 -3893 1571 275 66 48 chr5 36272483 36273268 -163356882 + L1M4 LINE L1 4075 4873 -1273 * 977 249 17 48 chr5 36273268 36273621 -163356529 + L1MD2 LINE L1 6016 6357 -2 22 56 0 0 chr5 36273967 36274003 -163356147 + AT_rich Low_complexity Low_complexity 1 36 0 761 231 6 0 chr5 36274145 36274305 -163355845 - L1MA10 LINE L1 -492 5820 5660 2002 191 47 61 chr5 36274305 36274652 -163355498 + L1MA10 LINE L1 5833 6172 -162 335 23 23 0 chr5 36274652 36274696 -163355454 + (CA)n Simple_repeat Simple_repeat 2 46 0 2002 191 47 61 chr5 36274696 36274857 -163355293 + L1MA10 LINE L1 6172 6334 0 233 259 89 54 chr5 36275124 36275236 -163354914 + HAL1 LINE L1 4 119 -2388 1412 165 31 4 chr5 36276076 36276330 -163353820 + AluSx SINE Alu 26 286 -26 440 285 34 50 chr5 36276644 36276823 -163353327 - MER5B DNA MER1_type 0 178 3 24 32 0 0 chr5 36277672 36277703 -163352447 + AT_rich Low_complexity Low_complexity 1 31 0 204 97 0 0 chr5 36277804 36277835 -163352315 + (TG)n Simple_repeat Simple_repeat 2 32 0 242 327 40 10 chr5 36278206 36278307 -163351843 + LTR67 LTR ERVL 440 543 -14 655 232 116 26 chr5 36278581 36278771 -163351379 - MER3 DNA MER1_type -2 207 1 2496 59 0 0 chr5 36279054 36279358 -163350792 + AluY SINE Alu 1 304 -7 1238 87 0 0 chr5 36279358 36279556 -163350594 + AluY SINE Alu 124 321 0 1568 183 3 11 chr5 36280167 36280452 -163349698 - AluJb SINE Alu -19 293 11 1068 157 81 157 chr5 36282090 36282337 -163347813 - MER7A DNA MER2_type -2733 305 90 1280 120 37 5 chr5 36282337 36282554 -163347596 + L1PA10 LINE L1 5944 6167 -1 1068 157 81 157 chr5 36282554 36282638 -163347512 - MER7A DNA MER2_type -2948 90 1 254 286 0 71 chr5 36283117 36283215 -163346935 + L2 LINE L2 3182 3272 0 225 151 0 0 chr5 36283502 36283555 -163346595 + A-rich Low_complexity Low_complexity 1 53 0 2150 117 0 19 chr5 36283761 36284077 -163346073 + AluSq SINE Alu 3 312 -1 22 0 0 0 chr5 36284234 36284256 -163345894 + AT_rich Low_complexity Low_complexity 1 22 0 403 316 100 60 chr5 36284305 36284651 -163345499 + L1MEd LINE L1 19 389 -5730 758 69 0 0 chr5 36284651 36284752 -163345398 + L1PA5 LINE L1 6049 6149 -5 403 316 100 60 chr5 36284752 36284857 -163345293 + L1MEd LINE L1 389 488 -5631 2077 113 0 3 chr5 36285262 36285587 -163344563 + AluSx SINE Alu 1 324 0 28 86 0 0 chr5 36285796 36285866 -163344284 + AT_rich Low_complexity Low_complexity 1 70 0 1961 162 0 0 chr5 36285955 36286433 -163343717 + AluSx SINE Alu 1 478 0 1332 246 22 33 chr5 36286434 36286796 -163343354 + MLT1B LTR MaLR 33 390 0 4480 70 50 2 chr5 36287886 36288488 -163341662 + L1PA7 LINE L1 5519 6149 -5 25 0 0 0 chr5 36289252 36289277 -163340873 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr5 36289310 36289335 -163340815 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 36289370 36289400 -163340750 + AT_rich Low_complexity Low_complexity 1 30 0 633 218 5 17 chr5 36289612 36289762 -163340388 - MER20 DNA MER1_type -5 214 65 280 241 17 0 chr5 36289978 36290036 -163340114 - MER20 DNA MER1_type -152 67 9 315 49 0 0 chr5 36290046 36290087 -163340063 + (CA)n Simple_repeat Simple_repeat 2 42 0 28 0 0 0 chr5 36291909 36291937 -163338213 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr5 36292079 36292105 -163338045 + AT_rich Low_complexity Low_complexity 1 26 0 936 306 39 29 chr5 36292190 36292677 -163337473 + L1MC/D LINE L1 5262 5753 -2055 1262 266 24 3 chr5 36292979 36293313 -163336837 - MER58B DNA MER1_type 0 341 1 273 208 19 0 chr5 36293806 36293859 -163336291 - Tigger3(Golem) DNA MER2_type -2974 55 2 185 180 20 0 chr5 36294053 36294103 -163336047 + (TA)n Simple_repeat Simple_repeat 1 51 0 5085 265 58 63 chr5 36294343 36297412 -163332738 + L1PA13 LINE L1 2 3073 -3724 7722 76 6 20 chr5 36297451 36298524 -163331626 - MER11C LTR ERVK -14 1057 1 1449 289 14 2 chr5 36298524 36299011 -163331139 + L1 LINE L1 3068 3560 -3237 21 0 0 0 chr5 36299051 36299072 -163331078 + AT_rich Low_complexity Low_complexity 1 21 0 510 317 30 15 chr5 36299198 36299466 -163330684 + L1PA12 LINE L1 11 282 -7299 6174 245 27 20 chr5 36300664 36303081 -163327069 + L1PA12 LINE L1 2328 4772 -2812 4862 154 25 8 chr5 36303186 36304037 -163326113 + L1PA16 LINE L1 5293 6157 -9 14150 135 10 7 chr5 36304336 36306642 -163323508 - L1P LINE L1 -1032 5114 2802 4336 72 48 0 chr5 36306640 36307226 -163322924 + L1PA8A LINE L1 5490 6103 -28 * 25 0 0 0 chr5 36307911 36307936 -163322214 + AT_rich Low_complexity Low_complexity 1 25 0 2928 91 0 0 chr5 36308028 36308629 -163321521 - L1PA7 LINE L1 -589 5565 4965 4338 58 19 10 chr5 36308629 36309196 -163320954 + L1PA7 LINE L1 5566 6154 0 21 0 0 0 chr5 36309263 36309284 -163320866 + AT_rich Low_complexity Low_complexity 1 21 0 2104 86 3 58 chr5 36311749 36312074 -163318076 + AluY SINE Alu 1 307 -4 2043 143 3 0 chr5 36312193 36312500 -163317650 + AluSq SINE Alu 1 308 -5 251 378 45 19 chr5 36313107 36313263 -163316887 + MIR3 SINE MIR 23 182 -26 34 24 0 0 chr5 36313268 36313309 -163316841 + AT_rich Low_complexity Low_complexity 1 41 0 2115 158 11 13 chr5 36314018 36314392 -163315758 + THE1C LTR MaLR 3 375 0 8403 137 51 53 chr5 36314400 36315974 -163314176 + THE1C-int LTR MaLR 10 1580 0 1869 176 24 21 chr5 36315974 36316348 -163313802 + THE1C LTR MaLR 1 375 0 2382 279 66 28 chr5 36316974 36318264 -163311886 - L1 LINE L1 -3190 2780 1431 956 269 26 4 chr5 36318264 36318498 -163311652 - MER8 DNA MER2_type 0 239 1 2382 279 66 28 chr5 36318498 36319542 -163310608 - L1 LINE L1 -4539 1431 428 322 307 20 47 chr5 36319714 36319864 -163310286 - L1 LINE L1 -5497 394 249 894 324 30 30 chr5 36319969 36320336 -163309814 - L1 LINE L1 -5524 367 1 474 302 42 37 chr5 36320336 36320551 -163309599 - L2 LINE L2 -529 2785 2570 327 148 46 28 chr5 36320639 36320747 -163309403 + (TA)n Simple_repeat Simple_repeat 1 110 0 336 327 67 22 chr5 36320921 36321233 -163308917 - L2 LINE L2 -1005 2309 1984 306 333 0 0 chr5 36321356 36321446 -163308704 + L1MC4 LINE L1 6614 6703 -1339 301 303 0 0 chr5 36321400 36321489 -163308661 - L1MC4 LINE L1 -1339 6703 6615 * 182 180 16 0 chr5 36323058 36323119 -163307031 + A-rich Low_complexity Low_complexity 3 64 0 240 35 0 0 chr5 36323421 36323450 -163306700 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 258 61 98 chr5 36323848 36323980 -163306170 + MIR SINE MIR 28 154 -108 1072 248 33 51 chr5 36324749 36325144 -163305006 - MLT1B LTR MaLR 0 390 3 545 326 53 28 chr5 36325820 36326105 -163304045 + L1MC4a LINE L1 5364 5655 -2153 255 291 227 0 chr5 36326295 36326436 -163303714 + L1MC4a LINE L1 5748 5920 -1888 26 30 0 0 chr5 36326436 36326469 -163303681 + AT_rich Low_complexity Low_complexity 1 33 0 1536 138 10 51 chr5 36326470 36326781 -163303369 - L1MA3 LINE L1 -208 6097 5800 183 298 0 0 chr5 36326950 36326997 -163303153 - L3 LINE CR1 -4 1573 1527 537 271 53 0 chr5 36327842 36327975 -163302175 + MER5A DNA MER1_type 27 166 -23 1342 240 80 15 chr5 36328219 36328556 -163301594 + MLT1B LTR MaLR 32 390 0 1683 167 3 37 chr5 36328623 36328946 -163301204 + AluJo SINE Alu 1 312 0 313 329 56 12 chr5 36329028 36329189 -163300961 + MIR SINE MIR 66 233 -29 1190 140 78 26 chr5 36329782 36330080 -163300070 - MER4E LTR ERV1 -141 638 273 587 207 6 55 chr5 36330654 36330773 -163299377 - L1MA10 LINE L1 -7 6327 6217 4571 141 89 6 chr5 36330773 36331604 -163298546 + MER4D LTR ERV1 1 900 -3 587 207 6 55 chr5 36331604 36331648 -163298502 - L1MA10 LINE L1 -117 6217 6172 360 0 0 0 chr5 36331671 36331711 -163298439 + (TG)n Simple_repeat Simple_repeat 2 41 0 204 255 0 0 chr5 36332086 36332133 -163298017 + T-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 36332393 36332414 -163297736 + AT_rich Low_complexity Low_complexity 1 21 0 1029 319 143 31 chr5 36332994 36333744 -163296406 - L2 LINE L2 -337 2977 2144 1731 223 53 65 chr5 36334496 36335047 -163295103 - MER74A LTR ERVL -14 544 1 332 346 129 38 chr5 36335047 36335310 -163294840 - MER45C DNA AcHobo -333 620 334 580 303 52 58 chr5 36335369 36335583 -163294567 - MER45C DNA AcHobo -606 347 134 5565 25 0 3 chr5 36335583 36336234 -163293916 + L1PA3 LINE L1 5507 6155 0 580 303 52 58 chr5 36336234 36336349 -163293801 - MER45C DNA AcHobo -819 134 20 219 320 0 13 chr5 36336909 36336987 -163293163 + MIR SINE MIR 169 245 -17 2216 97 0 0 chr5 36338506 36338794 -163291356 + AluSg1 SINE Alu 1 288 -21 2152 103 78 6 chr5 36339455 36339803 -163290347 + THE1C LTR MaLR 1 373 -2 393 324 139 6 chr5 36342620 36342793 -163287357 - MIR SINE MIR -5 257 62 614 304 88 5 chr5 36343300 36343504 -163286646 - MLT1J2 LTR MaLR -131 319 99 1036 230 62 60 chr5 36343944 36344473 -163285677 + MLT1E LTR MaLR 51 593 0 23 0 0 0 chr5 36345084 36345107 -163285043 + AT_rich Low_complexity Low_complexity 1 23 0 2127 108 3 3 chr5 36345307 36345604 -163284546 - AluSx SINE Alu -15 297 1 327 309 43 25 chr5 36345683 36345845 -163284305 + Charlie8 DNA MER1_type 7 171 -2246 334 261 304 0 chr5 36346613 36346751 -163283399 - MER5A DNA MER1_type -9 180 1 609 92 0 0 chr5 36347052 36347150 -163283000 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 21 36 0 0 chr5 36347255 36347283 -163282867 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 36347509 36347532 -163282618 + AT_rich Low_complexity Low_complexity 1 23 0 818 289 150 11 chr5 36348434 36348794 -163281356 + MLT1J2 LTR MaLR 4 413 -37 268 309 15 0 chr5 36349561 36349629 -163280521 + MIR SINE MIR 194 262 0 283 370 11 54 chr5 36350221 36350405 -163279745 - MIR SINE MIR -21 241 66 26 30 0 0 chr5 36350690 36350723 -163279427 + AT_rich Low_complexity Low_complexity 1 33 0 198 341 23 23 chr5 36351111 36351199 -163278951 + MIR SINE MIR 52 139 -123 834 239 60 98 chr5 36352821 36353168 -163276982 + LTR37B LTR ERV1 6 334 -134 2080 127 10 0 chr5 36353168 36353467 -163276683 - AluSq SINE Alu -11 302 1 834 239 60 98 chr5 36353467 36353570 -163276580 + LTR37B LTR ERV1 334 439 -29 304 333 26 17 chr5 36354771 36354888 -163275262 + MER5A DNA MER1_type 63 180 -9 459 349 26 5 chr5 36356783 36356975 -163273175 + MIR SINE MIR 6 201 -61 932 174 0 13 chr5 36357243 36357398 -163272752 - AluJo SINE Alu -33 279 127 951 173 106 16 chr5 36357398 36357652 -163272498 + Charlie1 DNA MER1_type 2485 2761 0 347 328 49 16 chr5 36358284 36358467 -163271683 - L1ME3A LINE L1 -4 6166 5978 477 304 29 42 chr5 36358484 36358796 -163271354 - L1ME3A LINE L1 -238 5932 5625 180 97 0 0 chr5 36358801 36358832 -163271318 + (T)n Simple_repeat Simple_repeat 1 31 0 1361 276 62 74 chr5 36358930 36359235 -163270915 - L1ME3A LINE L1 -825 5321 5014 1350 221 3 13 chr5 36359235 36359533 -163270617 - AluJo SINE Alu -15 297 3 1361 276 62 74 chr5 36359533 36360532 -163269618 - L1ME3A LINE L1 -1132 5014 4032 1657 198 21 3 chr5 36360582 36360910 -163269240 + MER2 DNA MER2_type 7 340 -5 281 343 84 3 chr5 36360911 36361208 -163268942 - L1ME3A LINE L1 -2167 3979 3659 21 0 0 0 chr5 36361387 36361408 -163268742 + AT_rich Low_complexity Low_complexity 1 21 0 1595 210 121 7 chr5 36361658 36362111 -163268039 - MLT1D LTR MaLR 0 505 1 1601 103 0 0 chr5 36362260 36362473 -163267677 - AluSg/x SINE Alu -14 296 84 204 312 128 43 chr5 36363242 36363383 -163266767 + L3 LINE CR1 1416 1568 -9 805 234 83 40 chr5 36364162 36364620 -163265530 + MLT1F1 LTR MaLR 7 549 -18 779 200 25 15 chr5 36364620 36364820 -163265330 + MLT1A1 LTR MaLR 1 202 -163 235 252 14 0 chr5 36365059 36365202 -163264948 + (TA)n Simple_repeat Simple_repeat 1 145 0 360 125 0 0 chr5 36365210 36365272 -163264878 + MLT2B3 LTR ERVL 403 554 0 181 309 0 0 chr5 36365342 36365384 -163264766 - MIR SINE MIR -218 44 3 235 307 0 0 chr5 36365667 36365755 -163264395 - L1MC4 LINE L1 -1340 6702 6615 252 177 0 97 chr5 36365778 36365840 -163264310 + MLT2B1 LTR ERVL 465 520 0 591 195 9 18 chr5 36366227 36366340 -163263810 - MER45 DNA AcHobo -1468 113 2 241 389 50 27 chr5 36366898 36367158 -163262992 - L2 LINE L2 -840 2474 2209 255 289 0 24 chr5 36367240 36367323 -163262827 + GA-rich Low_complexity Low_complexity 2 82 0 221 0 35 0 chr5 36368448 36368477 -163261673 + (GAA)n Simple_repeat Simple_repeat 2 31 0 44 63 0 0 chr5 36368856 36368935 -163261215 + AT_rich Low_complexity Low_complexity 1 79 0 37 0 0 0 chr5 36369087 36369124 -163261026 + AT_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chr5 36369133 36369166 -163260984 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 36369428 36369449 -163260701 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr5 36369498 36369520 -163260630 + (T)n Simple_repeat Simple_repeat 1 22 0 1889 141 20 0 chr5 36369872 36370209 -163259941 + AluSx SINE Alu 1 343 0 520 126 0 29 chr5 36370210 36370313 -163259837 + (GGGAA)n Simple_repeat Simple_repeat 5 104 0 315 239 0 0 chr5 36370767 36370834 -163259316 + MLT1A1 LTR MaLR 296 362 -3 195 42 0 0 chr5 36371142 36371166 -163258984 + (TC)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr5 36372097 36372120 -163258030 + AT_rich Low_complexity Low_complexity 1 23 0 2126 260 29 94 chr5 36373567 36374416 -163255734 + MER21B LTR ERV1 13 806 -57 2221 107 0 0 chr5 36375325 36375625 -163254525 - AluSg SINE Alu -10 300 1 252 0 0 0 chr5 36375707 36375735 -163254415 + (CA)n Simple_repeat Simple_repeat 1 28 0 719 126 42 21 chr5 36376104 36376247 -163253903 - L1MA9 LINE L1 -6 6306 6161 2258 69 3 50 chr5 36376515 36376832 -163253318 + AluY SINE Alu 4 305 -6 285 372 122 21 chr5 36377762 36378187 -163251963 + L3 LINE CR1 584 1051 -526 243 218 0 0 chr5 36378405 36378460 -163251690 + (TA)n Simple_repeat Simple_repeat 1 55 0 375 23 0 0 chr5 36378460 36378504 -163251646 + (CA)n Simple_repeat Simple_repeat 2 45 0 1554 148 41 0 chr5 36378511 36378781 -163251369 + Tigger3(Golem) DNA MER2_type 2148 2428 -601 263 340 0 0 chr5 36378883 36378989 -163251161 + G-rich Low_complexity Low_complexity 1 106 0 895 265 123 19 chr5 36379102 36379461 -163250689 + L1MD2 LINE L1 5714 6109 -250 1078 281 109 38 chr5 36379461 36379593 -163250557 + MLT1D LTR MaLR 2 123 -382 1958 131 33 7 chr5 36379593 36379898 -163250252 + AluSq SINE Alu 1 313 0 1078 281 109 38 chr5 36379898 36380214 -163249936 + MLT1D LTR MaLR 123 482 -23 990 212 19 35 chr5 36380220 36380479 -163249671 + L1MD2 LINE L1 6104 6358 -1 1922 293 75 19 chr5 36380498 36381552 -163248598 + L1ME3A LINE L1 5038 6157 -13 4164 187 36 23 chr5 36382469 36382892 -163247258 + L1MB1 LINE L1 5032 5448 -720 2249 97 0 0 chr5 36382892 36383190 -163246960 + AluSx SINE Alu 1 298 -14 4164 187 36 23 chr5 36383190 36383882 -163246268 + L1MB1 LINE L1 5448 6163 -5 1597 159 91 14 chr5 36383891 36384242 -163245908 + L1MA6 LINE L1 5866 6243 -57 302 77 0 0 chr5 36384242 36384281 -163245869 + L1MA6 LINE L1 6205 6243 -57 364 198 35 0 chr5 36384284 36384370 -163245780 + L1MA6 LINE L1 6208 6296 -4 24 0 0 0 chr5 36385062 36385086 -163245064 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 36385480 36385502 -163244648 + AT_rich Low_complexity Low_complexity 1 22 0 25 51 0 0 chr5 36385662 36385701 -163244449 + AT_rich Low_complexity Low_complexity 1 39 0 894 246 84 78 chr5 36385961 36386448 -163243702 + MLT1F1 LTR MaLR 3 492 -75 1680 180 14 34 chr5 36387622 36387972 -163242178 + MER7A DNA MER2_type 1 341 -5 363 23 0 0 chr5 36388083 36388127 -163242023 + (TC)n Simple_repeat Simple_repeat 2 45 0 28 0 0 0 chr5 36388601 36388629 -163241521 + AT_rich Low_complexity Low_complexity 1 28 0 226 240 62 31 chr5 36389884 36389980 -163240170 + MER112 DNA MER1_type 66 164 -96 234 139 10 50 chr5 36390249 36390350 -163239800 + (TA)n Simple_repeat Simple_repeat 2 98 0 32 0 0 0 chr5 36390631 36390663 -163239487 + AT_rich Low_complexity Low_complexity 1 32 0 30 69 0 0 chr5 36392454 36392512 -163237638 + AT_rich Low_complexity Low_complexity 1 58 0 239 366 79 6 chr5 36392541 36392705 -163237445 + L2 LINE L2 2530 2705 -609 435 310 48 48 chr5 36392907 36393175 -163236975 + L2 LINE L2 2991 3258 -55 1952 185 29 0 chr5 36393266 36393612 -163236538 + MLT1A1 LTR MaLR 10 365 0 1692 180 0 22 chr5 36393744 36394055 -163236095 + AluJo SINE Alu 1 304 -8 207 373 56 32 chr5 36395984 36396110 -163234040 - MIR SINE MIR -129 133 5 24 32 0 0 chr5 36396622 36396653 -163233497 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 36397026 36397047 -163233103 + AT_rich Low_complexity Low_complexity 1 21 0 430 323 89 21 chr5 36397508 36397790 -163232360 + L1MDa LINE L1 35 335 -6205 330 26 0 0 chr5 36398210 36398249 -163231901 + (TG)n Simple_repeat Simple_repeat 2 40 0 678 222 54 68 chr5 36399854 36400075 -163230075 - MER20 DNA MER1_type -1 218 1 26 0 0 0 chr5 36400454 36400480 -163229670 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 36401127 36401149 -163229001 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 36401219 36401240 -163228910 + AT_rich Low_complexity Low_complexity 1 21 0 31 44 0 0 chr5 36401344 36401389 -163228761 + AT_rich Low_complexity Low_complexity 1 45 0 255 321 93 56 chr5 36403012 36403227 -163226923 + MIR SINE MIR 29 251 -11 192 40 0 0 chr5 36403965 36403990 -163226160 + (TG)n Simple_repeat Simple_repeat 2 26 0 273 345 65 65 chr5 36404043 36404286 -163225864 + L2 LINE L2 1163 1409 -1905 2198 39 14 21 chr5 36404286 36404612 -163225538 + AluY SINE Alu 1 324 0 273 345 65 65 chr5 36404612 36404753 -163225397 + L2 LINE L2 1408 1548 -1766 266 297 65 65 chr5 36405786 36406049 -163224101 + HAL1 LINE L1 1405 1667 -840 306 0 0 0 chr5 36406088 36406122 -163224028 + (CA)n Simple_repeat Simple_repeat 2 35 0 364 169 45 0 chr5 36406220 36406309 -163223841 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 22 35 0 0 chr5 36407012 36407041 -163223109 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 36407716 36407744 -163222406 + AT_rich Low_complexity Low_complexity 1 28 0 2064 104 38 0 chr5 36407873 36408161 -163221989 - AluY SINE Alu -12 299 1 23 33 0 0 chr5 36408387 36408417 -163221733 + AT_rich Low_complexity Low_complexity 1 30 0 386 344 38 6 chr5 36409076 36409236 -163220914 - L2 LINE L2 -296 3017 2853 873 231 165 42 chr5 36409236 36409559 -163220591 + MLT1A1 LTR MaLR 1 424 -2 1410 316 70 33 chr5 36409572 36410399 -163219751 - L2 LINE L2 -467 2847 1990 2576 175 10 0 chr5 36410602 36411110 -163219040 - L1 LINE L1 -1639 4507 3995 288 0 0 0 chr5 36411676 36411708 -163218442 + (CA)n Simple_repeat Simple_repeat 2 33 0 1642 214 63 41 chr5 36411945 36412435 -163217715 + MLT1D LTR MaLR 3 503 -2 222 91 0 0 chr5 36414522 36414555 -163215595 + (TG)n Simple_repeat Simple_repeat 2 34 0 183 309 27 45 chr5 36415917 36416027 -163214123 - MIR SINE MIR -97 165 58 1825 120 49 0 chr5 36416380 36416646 -163213504 - AluSx SINE Alu -5 307 29 421 367 146 27 chr5 36416717 36417232 -163212918 + L2 LINE L2 2402 2977 -337 229 346 0 0 chr5 36418191 36418272 -163211878 + CT-rich Low_complexity Low_complexity 1 81 0 220 320 69 40 chr5 36419261 36419436 -163210714 + MIR SINE MIR 9 188 -74 441 261 35 74 chr5 36419894 36420177 -163209973 - L1ME3A LINE L1 -166 6004 5733 23 0 0 0 chr5 36420196 36420219 -163209931 + AT_rich Low_complexity Low_complexity 1 23 0 235 218 73 0 chr5 36420240 36420295 -163209855 + L1ME LINE L1 5731 5789 -381 919 248 103 0 chr5 36420345 36420607 -163209543 - L1ME3A LINE L1 -448 5722 5434 1730 106 23 8 chr5 36421335 36421600 -163208550 - L1PA13 LINE L1 0 6163 5895 27 92 0 0 chr5 36422371 36422447 -163207703 + AT_rich Low_complexity Low_complexity 1 76 0 22 35 0 0 chr5 36422837 36422866 -163207284 + AT_rich Low_complexity Low_complexity 1 29 0 34 42 0 0 chr5 36422936 36422984 -163207166 + AT_rich Low_complexity Low_complexity 1 48 0 9682 111 30 2 chr5 36423335 36425472 -163204678 - L1PA3 LINE L1 0 6155 3982 182 194 0 0 chr5 36425724 36425760 -163204390 + L2 LINE L2 3217 3252 -20 250 296 0 0 chr5 36427361 36427432 -163202718 + CT-rich Low_complexity Low_complexity 1 71 0 25 0 0 0 chr5 36427945 36427970 -163202180 + AT_rich Low_complexity Low_complexity 1 25 0 365 309 111 10 chr5 36428252 36428459 -163201691 - L1ME LINE L1 -331 5790 5563 807 188 7 0 chr5 36428479 36428628 -163201522 - AluJb SINE Alu -2 310 161 1245 147 0 76 chr5 36428628 36428852 -163201298 - AluJb SINE Alu -101 211 5 1218 157 9 26 chr5 36429065 36429295 -163200855 + THE1C LTR MaLR 1 226 -149 803 146 35 64 chr5 36429405 36429521 -163200629 + THE1C LTR MaLR 210 321 -54 2537 98 0 46 chr5 36429521 36429910 -163200240 - THE1C LTR MaLR -2 373 3 803 146 35 64 chr5 36429910 36429964 -163200186 + THE1C LTR MaLR 321 375 0 1893 135 31 7 chr5 36430498 36430787 -163199363 - AluSq SINE Alu -17 296 1 195 100 0 0 chr5 36430877 36430907 -163199243 + (T)n Simple_repeat Simple_repeat 1 30 0 1746 132 9 64 chr5 36431788 36431869 -163198281 + Tigger3(Golem) DNA MER2_type 1 85 -1146 2255 76 7 20 chr5 36431869 36432173 -163197977 + AluSg SINE Alu 1 300 -10 1746 132 9 64 chr5 36432173 36432417 -163197733 + Tigger3(Golem) DNA MER2_type 85 308 -923 207 256 0 0 chr5 36432423 36432466 -163197684 + (TG)n Simple_repeat Simple_repeat 1 43 0 241 279 23 0 chr5 36432466 36432552 -163197598 - L1MC4 LINE L1 -1340 6702 6615 214 211 0 0 chr5 36432556 36432594 -163197556 + (TA)n Simple_repeat Simple_repeat 1 38 0 2346 247 97 34 chr5 36433186 36434570 -163195580 + L1MD2 LINE L1 647 2112 -4294 2407 215 35 15 chr5 36434620 36435275 -163194875 + L1MD2 LINE L1 3780 4447 -1959 2186 237 79 23 chr5 36435288 36435452 -163194698 + L1MD2 LINE L1 5227 5380 -1239 1659 147 12 77 chr5 36435452 36435778 -163194372 + AluSx SINE Alu 1 305 -7 2186 237 79 23 chr5 36435778 36436462 -163193688 + L1MD2 LINE L1 5380 6130 -489 957 239 76 40 chr5 36436537 36436838 -163193312 + L1MD2 LINE L1 6293 6604 -15 1195 122 17 0 chr5 36437795 36437976 -163192174 + L1PB1 LINE L1 5608 5791 -360 205 125 21 21 chr5 36438044 36438092 -163192058 + (TA)n Simple_repeat Simple_repeat 2 49 0 2327 123 6 3 chr5 36438157 36438514 -163191636 + L1PB1 LINE L1 5787 6144 -7 2012 137 3 3 chr5 36440033 36440340 -163189810 - AluY SINE Alu -4 307 1 24 0 0 0 chr5 36441201 36441225 -163188925 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr5 36441458 36441484 -163188666 + AT_rich Low_complexity Low_complexity 1 26 0 217 228 18 0 chr5 36442729 36442786 -163187364 + (CA)n Simple_repeat Simple_repeat 1 58 0 2336 136 22 3 chr5 36442915 36443283 -163186867 + THE1C LTR MaLR 1 375 0 317 246 48 12 chr5 36445282 36445449 -163184701 + (TA)n Simple_repeat Simple_repeat 1 173 0 369 293 75 15 chr5 36446202 36446335 -163183815 + MLT1J1 LTR MaLR 193 333 -113 189 0 0 0 chr5 36446471 36446492 -163183658 + (A)n Simple_repeat Simple_repeat 1 21 0 256 286 29 0 chr5 36446616 36446686 -163183464 + L2 LINE L2 3201 3272 0 237 336 0 26 chr5 36447155 36447271 -163182879 + GA-rich Low_complexity Low_complexity 4 116 0 30 27 0 0 chr5 36447370 36447407 -163182743 + AT_rich Low_complexity Low_complexity 1 37 0 3226 169 64 3 chr5 36447796 36448434 -163181716 - Tigger3(Golem) DNA MER2_type 0 3029 2353 408 250 52 15 chr5 36448621 36448757 -163181393 + Charlie1 DNA MER1_type 2621 2761 0 1283 267 59 24 chr5 36449779 36450248 -163179902 + MLT1G LTR MaLR 35 588 -2 1602 162 40 0 chr5 36451147 36451446 -163178704 + AluSx SINE Alu 1 310 0 931 186 104 0 chr5 36451708 36451929 -163178221 - Tigger2 DNA MER2_type 0 2718 2475 3549 166 45 31 chr5 36451998 36452279 -163177871 - Tigger2 DNA MER2_type -1971 747 471 1816 123 8 0 chr5 36452279 36452539 -163177611 - AluSg1 SINE Alu -8 301 40 3549 166 45 31 chr5 36452539 36452994 -163177156 - Tigger2 DNA MER2_type -2247 471 1 189 159 0 0 chr5 36453622 36453666 -163176484 + (TA)n Simple_repeat Simple_repeat 1 44 0 582 208 30 42 chr5 36453943 36454111 -163176039 - LTR40a LTR ERVL -1 518 353 389 276 172 23 chr5 36454112 36454286 -163175864 - MIR SINE MIR -61 201 2 467 229 37 0 chr5 36455594 36455703 -163174447 - MIR SINE MIR -37 225 113 569 342 7 48 chr5 36456805 36457077 -163173073 - MIR SINE MIR 0 262 2 2227 301 96 75 chr5 36459186 36460807 -163169343 + L2 LINE L2 690 2344 -970 214 339 59 17 chr5 36461250 36461368 -163168782 + MIR3 SINE MIR 55 177 -31 32 0 0 0 chr5 36462051 36462083 -163168067 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 36462138 36462161 -163167989 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 36463455 36463476 -163166674 + AT_rich Low_complexity Low_complexity 1 21 0 1768 162 59 0 chr5 36463927 36464267 -163165883 - MER46B DNA MER2_type -1 235 1 21 0 0 0 chr5 36465418 36465439 -163164711 + AT_rich Low_complexity Low_complexity 1 21 0 1970 112 49 0 chr5 36465951 36466237 -163163913 - AluSx SINE Alu -12 300 1 23 0 0 0 chr5 36466274 36466297 -163163853 + AT_rich Low_complexity Low_complexity 1 23 0 229 343 99 95 chr5 36467345 36467777 -163162373 - L2 LINE L2 -2 3270 2837 1152 259 29 26 chr5 36468098 36468449 -163161701 + MLT1A2 LTR MaLR 23 374 0 246 386 64 37 chr5 36468623 36469107 -163161043 - L2 LINE L2 -980 2334 1838 191 188 0 47 chr5 36471176 36471240 -163158910 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 1091 96 19 201 chr5 36471989 36472303 -163157847 - Tigger2 DNA MER2_type -1 2717 2461 213 226 0 0 chr5 36472403 36472456 -163157694 + T-rich Low_complexity Low_complexity 1 53 0 209 243 108 0 chr5 36472633 36472707 -163157443 + L2 LINE L2 2410 2491 -823 675 290 123 53 chr5 36472707 36473352 -163156798 + L2 LINE L2 2618 3309 -4 215 368 61 0 chr5 36473335 36473449 -163156701 - L3 LINE CR1 -729 848 728 * 2119 40 0 0 chr5 36475071 36475322 -163154828 - AluY SINE Alu -17 294 44 349 290 99 83 chr5 36476433 36476757 -163153393 + L1M2 LINE L1 799 1127 -5722 288 0 0 0 chr5 36477802 36477834 -163152316 + (TG)n Simple_repeat Simple_repeat 2 33 0 1279 146 135 22 chr5 36477876 36478150 -163152000 - AluSx SINE Alu -7 305 1 522 366 160 13 chr5 36478176 36478627 -163151523 + L2 LINE L2 1851 2367 -947 1164 188 13 4 chr5 36478768 36479002 -163151148 - L1P LINE L1 -1664 4482 4247 398 222 65 81 chr5 36479216 36479401 -163150749 + MIR SINE MIR 66 247 -15 2667 170 12 12 chr5 36480947 36481459 -163148691 - L1PA13 LINE L1 0 6163 5652 1161 148 27 0 chr5 36483235 36483418 -163146732 - MER58B DNA MER1_type 0 341 154 1481 128 144 109 chr5 36483525 36483893 -163146257 - MSTA LTR MaLR -47 381 1 8158 176 6 45 chr5 36483893 36485535 -163144615 - MSTA-int LTR MaLR 0 1580 3 1936 153 137 8 chr5 36485537 36485916 -163144234 - MSTA LTR MaLR 0 428 1 2526 39 0 10 chr5 36486197 36486504 -163143646 + AluY SINE Alu 1 304 -7 22 35 0 0 chr5 36488163 36488192 -163141958 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 36488222 36488245 -163141905 + AT_rich Low_complexity Low_complexity 1 23 0 304 337 46 40 chr5 36489052 36489227 -163140923 + MIR SINE MIR 28 203 -59 1922 102 11 0 chr5 36489541 36489806 -163140344 + AluY SINE Alu 44 311 0 31 26 0 0 chr5 36489823 36489861 -163140289 + AT_rich Low_complexity Low_complexity 1 38 0 213 320 13 115 chr5 36490289 36490445 -163139705 - MIR SINE MIR -9 253 114 412 136 0 0 chr5 36490939 36491005 -163139145 + MADE1 DNA Mariner 13 78 -2 180 111 0 0 chr5 36492560 36492587 -163137563 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2402 129 17 21 chr5 36494072 36494491 -163135659 - L1PA12 LINE L1 -7 6161 5745 228 220 17 0 chr5 36494491 36494550 -163135600 - L1P LINE L1 -1623 4523 4464 773 78 0 0 chr5 36494659 36494762 -163135388 - L1PA11 LINE L1 -327 5847 5745 * 817 229 0 19 chr5 36494759 36494969 -163135181 - L1 LINE L1 -1620 4526 4321 * 7014 163 26 17 chr5 36494967 36496292 -163133858 + L1P LINE L1 3145 4482 -1664 310 283 79 7 chr5 36496434 36496586 -163133564 - L2 LINE L2 -947 2367 2205 1200 219 78 12 chr5 36498751 36499071 -163131079 + MER58B DNA MER1_type 1 341 0 401 270 92 29 chr5 36499603 36499777 -163130373 - L1MEd LINE L1 -5354 765 581 30 59 0 0 chr5 36500345 36500396 -163129754 + AT_rich Low_complexity Low_complexity 1 51 0 202 88 29 0 chr5 36500424 36500458 -163129692 + (TA)n Simple_repeat Simple_repeat 1 35 0 202 194 28 0 chr5 36500625 36500697 -163129453 + (TA)n Simple_repeat Simple_repeat 1 74 0 1944 128 7 0 chr5 36500714 36501025 -163129125 + AluSq SINE Alu 1 313 0 413 232 147 38 chr5 36501082 36501401 -163128749 - L1MC5 LINE L1 -157 7804 7451 342 0 0 0 chr5 36501728 36501766 -163128384 + (TG)n Simple_repeat Simple_repeat 2 39 0 2024 113 0 33 chr5 36502962 36503264 -163126886 + AluSg SINE Alu 6 297 -13 594 111 44 0 chr5 36503412 36503502 -163126648 + Tigger3(Golem) DNA MER2_type 2800 2893 -136 407 253 23 0 chr5 36503521 36503695 -163126455 + (TA)n Simple_repeat Simple_repeat 1 178 0 189 339 123 0 chr5 36503857 36503987 -163126163 + MIR SINE MIR 34 179 -83 235 351 39 29 chr5 36504128 36504336 -163125814 + L2 LINE L2 2878 3087 -226 1987 142 7 0 chr5 36504505 36504800 -163125350 - AluSq SINE Alu -15 298 2 1920 210 50 17 chr5 36504976 36505438 -163124712 - L1MB4 LINE L1 -52 6128 5652 379 301 20 55 chr5 36505762 36505961 -163124189 + LTR33 LTR ERVL 330 521 0 2220 58 27 7 chr5 36506595 36506888 -163123262 - AluY SINE Alu -12 299 1 1094 189 16 0 chr5 36507051 36507241 -163122909 - MLT1B LTR MaLR -6 384 192 1212 52 0 0 chr5 36507282 36507436 -163122714 - L1PA4 LINE L1 -3 6152 5999 327 255 1 61 chr5 36507437 36507553 -163122597 - MLT1B LTR MaLR -164 226 125 1817 116 0 4 chr5 36508653 36508904 -163121246 + AluSx SINE Alu 2 251 -61 350 301 44 7 chr5 36509610 36509746 -163120404 + MLT1J2 LTR MaLR 8 148 -302 255 125 0 0 chr5 36509752 36509792 -163120358 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 2263 86 20 0 chr5 36509792 36510095 -163120055 - AluSc SINE Alu 0 309 1 271 89 0 67 chr5 36510789 36510834 -163119316 + AluSg/x SINE Alu 162 203 -99 921 84 0 0 chr5 36510846 36510993 -163119157 + AluSc SINE Alu 163 309 0 283 282 82 9 chr5 36511783 36511893 -163118257 - MARNA DNA Mariner -342 244 127 408 325 113 22 chr5 36512408 36512682 -163117468 - L2 LINE L2 -1102 2212 1914 1488 242 18 45 chr5 36513114 36513382 -163116768 - MLT1A2 LTR MaLR -1 373 116 2303 91 0 0 chr5 36513382 36513669 -163116481 - AluSc SINE Alu -3 306 20 1488 242 18 45 chr5 36513669 36513780 -163116370 - MLT1A2 LTR MaLR -258 116 4 488 127 13 0 chr5 36514083 36514162 -163115988 - MADE1 DNA Mariner 0 80 1 1677 114 4 30 chr5 36514377 36514640 -163115510 + AluSx SINE Alu 40 295 -17 336 24 0 0 chr5 36515121 36515162 -163114988 + (TG)n Simple_repeat Simple_repeat 2 42 0 1153 135 23 37 chr5 36516842 36517057 -163113093 + L1PA13 LINE L1 5944 6155 -8 267 285 16 24 chr5 36517534 36517657 -163112493 + HAL1 LINE L1 2228 2349 -158 21 0 0 0 chr5 36518981 36519002 -163111148 + AT_rich Low_complexity Low_complexity 1 21 0 303 154 0 0 chr5 36520065 36520130 -163110020 + T-rich Low_complexity Low_complexity 1 65 0 2384 59 7 7 chr5 36520307 36520610 -163109540 - AluY SINE Alu -8 303 1 273 411 0 0 chr5 36520700 36520812 -163109338 + L2 LINE L2 3190 3301 -12 194 289 114 61 chr5 36521095 36521209 -163108941 - L2 LINE L2 -1 3312 3193 527 83 0 0 chr5 36522528 36522600 -163107550 - L1P LINE L1 -2590 3556 3485 1770 248 42 56 chr5 36522930 36523434 -163106716 - MLT1C-int LTR MaLR -434 937 441 1411 224 0 4 chr5 36523436 36523713 -163106437 + AluJo SINE Alu 1 276 -36 276 30 0 0 chr5 36523720 36523753 -163106397 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1681 204 36 11 chr5 36523758 36524171 -163105979 - MLT1C-int LTR MaLR -1017 354 3 1184 221 16 118 chr5 36524174 36524495 -163105655 - MLT1C LTR MaLR 0 467 103 1860 182 0 0 chr5 36524497 36524805 -163105345 - AluSx SINE Alu -2 310 3 30 69 0 0 chr5 36524863 36524921 -163105229 + AT_rich Low_complexity Low_complexity 1 58 0 2012 125 3 10 chr5 36525868 36526156 -163103994 - AluSq SINE Alu -25 288 3 249 33 0 0 chr5 36526228 36526258 -163103892 + (TG)n Simple_repeat Simple_repeat 2 31 0 195 283 145 71 chr5 36526875 36527158 -163102992 + L2 LINE L2 2214 2517 -797 24 0 0 0 chr5 36527158 36527182 -163102968 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 36527874 36527903 -163102247 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 36528002 36528023 -163102127 + AT_rich Low_complexity Low_complexity 1 21 0 303 293 100 35 chr5 36528579 36528838 -163101312 + L1ME4a LINE L1 5601 5876 -245 189 0 0 0 chr5 36529467 36529488 -163100662 + (T)n Simple_repeat Simple_repeat 1 21 0 1400 201 80 6 chr5 36529830 36530212 -163099938 + MLT2B1 LTR ERVL 2 467 -53 207 0 0 0 chr5 36530212 36530235 -163099915 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 216 0 0 0 chr5 36530234 36530258 -163099892 + (TA)n Simple_repeat Simple_repeat 1 24 0 336 284 8 16 chr5 36530711 36530838 -163099312 + Tigger1 DNA MER2_type 275 400 -2018 2153 104 51 31 chr5 36530838 36531192 -163098958 - THE1B LTR MaLR -3 361 1 11357 98 5 6 chr5 36531192 36532773 -163097377 - THE1B-int LTR MaLR 0 1580 1 2069 114 99 15 chr5 36532773 36533106 -163097044 - THE1B LTR MaLR 0 364 4 * 2344 188 27 6 chr5 36533106 36533570 -163096580 + Tigger1 DNA MER2_type 401 874 -1544 255 294 5 15 chr5 36533599 36533714 -163096436 + G-rich Low_complexity Low_complexity 1 113 0 284 289 5 43 chr5 36533876 36534063 -163096087 + GA-rich Low_complexity Low_complexity 1 180 0 202 338 54 0 chr5 36534868 36534942 -163095208 - L2 LINE L2 -38 3275 3198 22 35 0 0 chr5 36535399 36535428 -163094722 + AT_rich Low_complexity Low_complexity 1 29 0 2229 113 3 0 chr5 36535708 36536019 -163094131 + AluSx SINE Alu 1 312 0 185 0 0 39 chr5 36536028 36536054 -163094096 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 477 309 26 0 chr5 36536089 36536241 -163093909 - MER5A DNA MER1_type -3 186 31 23 68 0 0 chr5 36536668 36536712 -163093438 + AT_rich Low_complexity Low_complexity 1 44 0 301 123 31 0 chr5 36537007 36537072 -163093078 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 356 323 83 0 chr5 36537354 36537546 -163092604 - LTR33 LTR ERVL -313 208 1 3689 106 44 13 chr5 36538223 36538836 -163091314 + L1MA1 LINE L1 5671 6302 0 249 257 43 0 chr5 36540732 36540802 -163089348 - L2 LINE L2 0 3272 3200 39 74 0 0 chr5 36540930 36541011 -163089139 + AT_rich Low_complexity Low_complexity 1 81 0 500 256 28 56 chr5 36541379 36541559 -163088591 - MIR SINE MIR -25 237 63 1795 160 0 0 chr5 36542531 36542813 -163087337 - AluSc SINE Alu -27 282 1 22 35 0 0 chr5 36544560 36544589 -163085561 + AT_rich Low_complexity Low_complexity 1 29 0 3228 168 41 3 chr5 36544904 36545519 -163084631 + L1PA15 LINE L1 5526 6163 -2 314 133 50 0 chr5 36545875 36545935 -163084215 - MADE1 DNA Mariner 0 80 18 1544 221 77 25 chr5 36546140 36546583 -163083567 + MLT1C LTR MaLR 1 466 -1 455 129 12 234 chr5 36546875 36547046 -163083104 + Tigger1 DNA MER2_type 1 133 -2285 250 222 0 19 chr5 36547042 36547096 -163083054 + Tigger1 DNA MER2_type 273 325 -2093 * 3967 192 29 8 chr5 36547228 36548025 -163082125 + Tigger1 DNA MER2_type 1605 2418 0 182 349 0 0 chr5 36548353 36548416 -163081734 - MIR SINE MIR -16 246 184 483 283 90 49 chr5 36548519 36548929 -163081221 + MLT1L LTR MaLR 182 608 -7 1976 141 0 28 chr5 36550420 36550739 -163079411 + AluSg SINE Alu 1 310 0 186 43 0 0 chr5 36550885 36550908 -163079242 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1621 173 0 61 chr5 36550912 36551242 -163078908 + AluJb SINE Alu 1 310 -2 1501 159 3 65 chr5 36551368 36551677 -163078473 + AluJo SINE Alu 1 290 -22 1942 133 3 7 chr5 36553224 36553518 -163076632 - AluSx SINE Alu -17 295 3 244 196 0 0 chr5 36553847 36553893 -163076257 - MADE1 DNA Mariner -34 46 1 22 0 0 0 chr5 36554390 36554412 -163075738 + AT_rich Low_complexity Low_complexity 1 22 0 313 176 27 0 chr5 36556349 36556423 -163073727 + (TA)n Simple_repeat Simple_repeat 1 76 0 198 343 27 41 chr5 36556996 36557069 -163073081 - MIR SINE MIR -93 115 44 186 296 235 0 chr5 36557681 36557762 -163072388 - MIR SINE MIR -64 144 45 298 359 21 14 chr5 36557977 36558119 -163072031 + L3 LINE CR1 423 565 -1012 256 288 114 15 chr5 36558184 36558316 -163071834 + MIR SINE MIR 105 249 -13 315 184 158 35 chr5 36558370 36558484 -163071666 + L3 LINE CR1 586 713 -864 4687 105 1 3 chr5 36558584 36559270 -163070880 - L1P LINE L1 -3533 2613 1929 5853 93 9 0 chr5 36559270 36560134 -163070016 + L1P LINE L1 2618 3489 -2657 297 291 65 30 chr5 36560136 36560365 -163069785 + L1MC3 LINE L1 392 565 -5480 366 225 12 88 chr5 36560695 36560819 -163069331 + L1MC3 LINE L1 1660 1771 -4793 2297 139 14 3 chr5 36560819 36561179 -163068971 + THE1B LTR MaLR 1 364 0 366 225 12 88 chr5 36561179 36561214 -163068936 + L1MC3 LINE L1 1771 1807 -4757 296 165 0 114 chr5 36561225 36561304 -163068846 + L1MC3 LINE L1 1924 1993 -4571 461 259 46 0 chr5 36561304 36561412 -163068738 + MLT2D LTR ERVL 187 299 -115 781 229 139 40 chr5 36561426 36562053 -163068097 + L1MC3 LINE L1 2008 8196 -7 248 333 0 0 chr5 36562068 36562158 -163067992 + L1M4 LINE L1 4652 4741 -1405 1890 144 0 3 chr5 36562165 36562479 -163067671 + AluSq SINE Alu 1 313 0 21 89 0 0 chr5 36562904 36562960 -163067190 + AT_rich Low_complexity Low_complexity 1 56 0 1646 202 53 43 chr5 36563759 36564155 -163065995 + MLT2D LTR ERVL 1 400 -14 2325 53 3 0 chr5 36565561 36565846 -163064304 + AluY SINE Alu 1 286 -25 234 0 0 0 chr5 36565846 36565872 -163064278 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 990 218 14 23 chr5 36565906 36566122 -163064028 - MER20 DNA MER1_type -5 214 1 406 358 13 0 chr5 36566285 36566436 -163063714 - MER91A DNA MER1_type -35 161 9 1798 161 129 23 chr5 36567099 36567485 -163062665 - MSTA LTR MaLR 0 428 2 16670 190 40 33 chr5 36567485 36569176 -163060974 - L1M3 LINE L1 -444 5724 4046 288 120 0 0 chr5 36569176 36569226 -163060924 + (CA)n Simple_repeat Simple_repeat 2 51 0 16670 190 40 33 chr5 36569226 36572295 -163057855 - L1M3 LINE L1 -2122 4046 917 1885 83 17 31 chr5 36572292 36572580 -163057570 + L1P LINE L1 3499 3782 -2364 * 1166 248 33 97 chr5 36573444 36573835 -163056315 + MLT2B1 LTR ERVL 1 384 -48 285 188 0 0 chr5 36573892 36573940 -163056210 + MLT2B1 LTR ERVL 367 414 0 407 294 81 54 chr5 36574001 36574297 -163055853 + MLT1I LTR MaLR 106 409 0 521 235 108 20 chr5 36574415 36574619 -163055531 - THE1C LTR MaLR 0 375 154 11442 98 2 4 chr5 36574740 36576497 -163053653 + L1P3 LINE L1 3752 5505 -649 515 118 0 0 chr5 36576497 36576581 -163053569 + L1PA7 LINE L1 6070 6154 0 21 161 0 0 chr5 36576751 36576782 -163053368 + AT_rich Low_complexity Low_complexity 1 31 0 241 322 67 33 chr5 36577360 36577450 -163052700 - L2 LINE L2 -238 3075 2983 717 214 28 8 chr5 36577497 36577662 -163052488 + MLT1A1 LTR MaLR 216 365 0 1057 317 72 38 chr5 36577668 36578223 -163051927 - L2 LINE L2 -585 2729 2156 199 202 46 0 chr5 36578269 36578378 -163051772 + (TA)n Simple_repeat Simple_repeat 1 114 0 345 348 91 36 chr5 36578379 36578598 -163051552 - L2 LINE L2 -1315 1999 1763 726 22 11 0 chr5 36578598 36578690 -163051460 + L1PA4 LINE L1 6061 6153 -2 345 348 91 36 chr5 36578690 36578723 -163051427 - L2 LINE L2 -1551 1763 1733 1135 226 41 0 chr5 36578920 36579141 -163051009 - Tigger7 DNA MER2_type -503 230 1 980 279 74 7 chr5 36580004 36580301 -163049849 - MLT1E2 LTR MaLR 0 626 310 579 82 0 103 chr5 36580708 36580805 -163049345 + THE1C LTR MaLR 1 87 -288 1261 246 50 52 chr5 36580816 36581100 -163049050 + L1MCa LINE L1 940 1224 -5202 1318 188 54 44 chr5 36581100 36581398 -163048752 + AluSx SINE Alu 1 301 -11 1261 246 50 52 chr5 36581398 36581657 -163048493 + L1MCa LINE L1 1224 1482 -4944 312 27 0 0 chr5 36581846 36581883 -163048267 + (TAA)n Simple_repeat Simple_repeat 2 38 0 323 318 49 88 chr5 36582124 36582429 -163047721 - MLT1I LTR MaLR -23 386 94 1795 186 23 23 chr5 36584077 36584464 -163045686 - L1MB1 LINE L1 0 6168 5782 2236 103 3 0 chr5 36585905 36586207 -163043943 - AluSg SINE Alu -7 303 1 859 168 0 0 chr5 36586738 36586869 -163043281 + FLAM_C SINE Alu 1 131 -12 246 239 47 47 chr5 36587133 36587346 -163042804 - L1ME LINE L1 -5057 1013 801 620 142 21 21 chr5 36587511 36587652 -163042498 + CT-rich Low_complexity Low_complexity 4 144 0 1211 51 11 11 chr5 36587662 36587840 -163042310 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 4474 57 3 7 chr5 36587840 36588415 -163041735 - L1PA7 LINE L1 -17 6137 5565 3185 105 0 0 chr5 36588415 36588874 -163041276 + L1P LINE L1 4392 4850 -1296 287 242 99 0 chr5 36589791 36589882 -163040268 + L1MB3 LINE L1 6004 6103 -80 315 113 0 0 chr5 36589883 36589936 -163040214 + (TG)n Simple_repeat Simple_repeat 1 53 0 455 226 10 0 chr5 36589936 36590038 -163040112 - FLAM_A SINE Alu -28 114 12 471 152 0 0 chr5 36590050 36590142 -163040008 + L1MB3 LINE L1 6089 6180 -3 22 0 0 0 chr5 36591225 36591247 -163038903 + AT_rich Low_complexity Low_complexity 1 22 0 2111 158 11 6 chr5 36591425 36591779 -163038371 - THE1B LTR MaLR -4 360 5 377 320 99 36 chr5 36591836 36592311 -163037839 - L1 LINE L1 -1313 4833 4329 482 115 71 9 chr5 36592498 36592611 -163037539 - L1MA9 LINE L1 -19 6293 6174 518 217 58 7 chr5 36592613 36592751 -163037399 - L1MA9 LINE L1 -237 6075 5931 237 309 93 80 chr5 36594211 36594586 -163035564 + L3 LINE CR1 1193 1572 -5 433 336 102 18 chr5 36594633 36594859 -163035291 - MIR SINE MIR -13 249 5 448 224 9 0 chr5 36595383 36595490 -163034660 + MLT1C-int LTR MaLR 1619 1726 -9 1517 226 100 9 chr5 36595503 36595924 -163034226 + MLT1C LTR MaLR 6 464 -3 39 60 0 0 chr5 36595964 36596031 -163034119 + AT_rich Low_complexity Low_complexity 1 67 0 705 104 17 9 chr5 36596343 36596458 -163033692 - MLT2C2 LTR ERVL -324 140 25 2354 82 0 19 chr5 36596996 36597313 -163032837 - AluY SINE Alu 0 311 1 463 340 65 10 chr5 36597636 36597939 -163032211 - MLT1J1 LTR MaLR -80 370 49 280 240 143 32 chr5 36598209 36598363 -163031787 + L2 LINE L2 1906 2076 -1238 206 412 35 35 chr5 36598911 36599081 -163031069 - MER5A DNA MER1_type -16 173 4 213 316 128 25 chr5 36599158 36599354 -163030796 + L3 LINE CR1 1240 1455 -122 3545 161 30 2 chr5 36600011 36600619 -163029531 - L1PA16 LINE L1 -104 6062 5438 54 16 0 0 chr5 36600988 36601049 -163029101 + AT_rich Low_complexity Low_complexity 1 61 0 645 217 88 77 chr5 36601158 36601430 -163028720 - MLT1B LTR MaLR -113 277 3 207 345 69 0 chr5 36601638 36601725 -163028425 + L2 LINE L2 3209 3301 -12 584 305 145 36 chr5 36602036 36602545 -163027605 + L2 LINE L2 2491 3048 -265 21 0 0 0 chr5 36602593 36602614 -163027536 + AT_rich Low_complexity Low_complexity 1 21 0 2194 228 17 17 chr5 36602849 36603449 -163026701 - L1 LINE L1 -763 5383 4784 509 200 0 30 chr5 36603445 36603580 -163026570 + L1P5 LINE L1 5347 5477 -679 * 21 0 0 0 chr5 36604563 36604584 -163025566 + AT_rich Low_complexity Low_complexity 1 21 0 258 32 0 0 chr5 36604815 36604846 -163025304 + (TA)n Simple_repeat Simple_repeat 1 31 0 228 325 68 17 chr5 36605076 36605193 -163024957 - L2 LINE L2 -1758 1556 1434 288 135 0 58 chr5 36607175 36607279 -163022871 + (TA)n Simple_repeat Simple_repeat 1 98 0 221 287 46 56 chr5 36607302 36607410 -163022740 + L2 LINE L2 2130 2236 -1078 701 287 27 89 chr5 36607416 36607820 -163022330 + L2 LINE L2 2359 2737 -577 460 325 58 34 chr5 36607852 36608058 -163022092 + LTR16A LTR ERVL 220 430 -20 259 272 0 18 chr5 36609971 36610140 -163020010 - FRAM SINE Alu 0 166 1 25 0 0 0 chr5 36610254 36610279 -163019871 + GC_rich Low_complexity Low_complexity 1 25 0 2319 79 0 0 chr5 36611098 36611401 -163018749 + L1PA7 LINE L1 5847 6149 -5 2125 120 3 0 chr5 36611451 36611752 -163018398 + AluSx SINE Alu 1 302 -10 24 53 0 0 chr5 36611929 36611967 -163018183 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr5 36612091 36612113 -163018037 + AT_rich Low_complexity Low_complexity 1 22 0 31 88 0 0 chr5 36612535 36612615 -163017535 + AT_rich Low_complexity Low_complexity 1 80 0 483 291 16 48 chr5 36613189 36613378 -163016772 - MIR SINE MIR -1 261 79 1474 162 24 4 chr5 36613409 36613692 -163016458 - AluSx SINE Alu 0 318 31 28 0 0 0 chr5 36614039 36614067 -163016083 + AT_rich Low_complexity Low_complexity 1 28 0 372 123 0 0 chr5 36614256 36614313 -163015837 - Alu SINE Alu -1 301 245 38 22 0 0 chr5 36614578 36614623 -163015527 + AT_rich Low_complexity Low_complexity 1 45 0 184 310 17 0 chr5 36615071 36615129 -163015021 + L2 LINE L2 3198 3256 -16 21 57 0 0 chr5 36616781 36616816 -163013334 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 36616859 36616881 -163013269 + AT_rich Low_complexity Low_complexity 1 22 0 2006 185 6 0 chr5 36616926 36617282 -163012868 - MER47A DNA MER2_type -8 358 1 996 229 121 10 chr5 36618379 36618685 -163011465 - MER2 DNA MER2_type -4 340 1 23 0 0 0 chr5 36619719 36619742 -163010408 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr5 36620225 36620259 -163009891 + AT_rich Low_complexity Low_complexity 1 34 0 239 420 57 6 chr5 36620269 36620426 -163009724 + L2 LINE L2 2919 3083 -230 2122 89 0 4 chr5 36620453 36620769 -163009381 - AluSc SINE Alu 0 315 1 2940 171 45 43 chr5 36620779 36621382 -163008768 - L1MC1 LINE L1 0 6333 5730 21 0 0 0 chr5 36621843 36621864 -163008286 + AT_rich Low_complexity Low_complexity 1 21 0 25 99 0 0 chr5 36622617 36622698 -163007452 + AT_rich Low_complexity Low_complexity 1 81 0 24 77 0 0 chr5 36623747 36623799 -163006351 + AT_rich Low_complexity Low_complexity 1 52 0 199 274 96 0 chr5 36623938 36624011 -163006139 - MIR3 SINE MIR -3 205 126 746 178 34 0 chr5 36624711 36624857 -163005293 + L1PB4 LINE L1 6006 6156 0 21 36 0 0 chr5 36626658 36626686 -163003464 + AT_rich Low_complexity Low_complexity 1 28 0 1844 128 0 0 chr5 36627037 36627303 -163002847 + AluY SINE Alu 37 302 -9 21 57 0 0 chr5 36627559 36627594 -163002556 + AT_rich Low_complexity Low_complexity 1 35 0 183 119 34 17 chr5 36627949 36628008 -163002142 + (TA)n Simple_repeat Simple_repeat 2 61 0 40 41 0 0 chr5 36628012 36628061 -163002089 + AT_rich Low_complexity Low_complexity 1 49 0 5088 61 1 2 chr5 36629395 36630537 -162999613 + L1PA5 LINE L1 4730 5870 -284 303 333 101 35 chr5 36682801 36682999 -162947151 - L1M2 LINE L1 -5734 1115 905 257 227 68 57 chr5 36683241 36683417 -162946733 + Charlie7 DNA MER1_type 2430 2607 -5 23 68 0 0 chr5 36684155 36684199 -162945951 + AT_rich Low_complexity Low_complexity 1 44 0 341 315 64 13 chr5 36684463 36684729 -162945421 - L2 LINE L2 -382 2931 2593 22 56 0 0 chr5 36685758 36685794 -162944356 + AT_rich Low_complexity Low_complexity 1 36 0 229 315 41 14 chr5 36685934 36686007 -162944143 - L2 LINE L2 -21 3251 3177 221 359 9 0 chr5 36686692 36686798 -162943352 + GA-rich Low_complexity Low_complexity 2 108 0 321 119 0 34 chr5 36687157 36687216 -162942934 - MLT2A1 LTR ERVL 0 453 397 * 2230 75 3 3 chr5 36687213 36687508 -162942642 - MLT2A1 LTR ERVL -149 295 1 1514 227 39 87 chr5 36689058 36689205 -162940945 + MLT2B1 LTR ERVL 1 154 -366 1875 145 50 36 chr5 36689205 36689564 -162940586 + THE1B LTR MaLR 1 364 0 1514 227 39 87 chr5 36689564 36689958 -162940192 + MLT2B1 LTR ERVL 154 516 -4 237 65 0 0 chr5 36690122 36690153 -162939997 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 224 335 148 19 chr5 36690724 36690879 -162939271 - MIR SINE MIR -3 259 85 230 287 33 49 chr5 36691096 36691218 -162938932 - LTR16A1 LTR ERVL -14 443 324 7375 48 5 2 chr5 36691509 36692404 -162937746 + MER11D LTR ERVK 1 897 0 614 226 186 63 chr5 36693829 36693870 -162936280 + MLT1A1 LTR MaLR 7 42 -323 1983 142 20 0 chr5 36693870 36694173 -162935977 + AluSp SINE Alu 1 309 -4 614 226 186 63 chr5 36694173 36694449 -162935701 + MLT1A1 LTR MaLR 42 363 -2 316 253 148 122 chr5 36694510 36694747 -162935403 + MIR SINE MIR 20 262 0 21 0 0 0 chr5 36694952 36694973 -162935177 + AT_rich Low_complexity Low_complexity 1 21 0 213 333 115 27 chr5 36695188 36695371 -162934779 + L2 LINE L2 3113 3311 -2 221 294 184 0 chr5 36696353 36696462 -162933688 + MIR SINE MIR 17 145 -63 1203 333 69 22 chr5 36696630 36697502 -162932648 + L2 LINE L2 2407 3313 0 3849 204 46 39 chr5 36697611 36698851 -162931299 + L1MB3 LINE L1 4907 6175 -8 192 315 8 100 chr5 36699025 36699155 -162930995 - L3 LINE CR1 -1341 236 119 22 0 0 0 chr5 36699457 36699479 -162930671 + AT_rich Low_complexity Low_complexity 1 22 0 22 70 0 0 chr5 36699679 36699722 -162930428 + AT_rich Low_complexity Low_complexity 1 43 0 303 179 0 0 chr5 36699993 36700060 -162930090 + (CAT)n Simple_repeat Simple_repeat 3 69 0 320 288 265 8 chr5 36700073 36700235 -162929915 - MIR SINE MIR -23 239 38 21 57 0 0 chr5 36701028 36701063 -162929087 + AT_rich Low_complexity Low_complexity 1 35 0 512 246 31 0 chr5 36701082 36701212 -162928938 - MIR SINE MIR -69 193 60 242 284 74 0 chr5 36701364 36701459 -162928691 + LTR50 LTR ERVL 1 102 -693 6482 124 10 1 chr5 36702936 36704715 -162925435 - L1PA8A LINE L1 0 6131 4337 6618 129 13 29 chr5 36704715 36705854 -162924296 + L1PA8A LINE L1 3211 4331 -1815 367 263 10 30 chr5 36706250 36706349 -162923801 + 7SK RNA RNA 1 97 -96 21 0 0 0 chr5 36707025 36707046 -162923104 + AT_rich Low_complexity Low_complexity 1 21 0 722 300 27 27 chr5 36707781 36708038 -162922112 - MIR SINE MIR -1 261 5 1928 135 10 3 chr5 36708551 36708854 -162921296 - AluSq SINE Alu -2 311 7 1360 161 107 18 chr5 36709378 36709658 -162920492 + THE1C LTR MaLR 1 305 -70 9690 134 35 5 chr5 36709695 36711228 -162918922 + THE1C-int LTR MaLR 1 1580 0 1941 158 21 34 chr5 36711228 36711608 -162918542 + THE1C LTR MaLR 1 375 0 1641 189 3 10 chr5 36711939 36712241 -162917909 + AluJb SINE Alu 1 300 -12 1296 270 53 20 chr5 36712526 36712978 -162917172 - MLT1C LTR MaLR 0 467 1 210 37 0 0 chr5 36713043 36713070 -162917080 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr5 36713175 36713203 -162916947 + AT_rich Low_complexity Low_complexity 1 28 0 219 226 17 43 chr5 36714195 36714310 -162915840 + T-rich Low_complexity Low_complexity 6 117 0 11314 214 41 31 chr5 36714409 36714459 -162915691 + L1MA4 LINE L1 12 60 -6422 207 0 0 0 chr5 36714459 36714482 -162915668 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 11314 214 41 31 chr5 36714482 36718951 -162911199 + L1MA4 LINE L1 60 4479 -2003 1936 159 48 17 chr5 36718951 36719304 -162910846 - THE1B LTR MaLR 0 364 1 11314 214 41 31 chr5 36719304 36719598 -162910552 + L1MA4 LINE L1 4479 4768 -1714 1640 135 32 97 chr5 36719598 36719999 -162910151 - THE1C LTR MaLR 0 375 1 11314 214 41 31 chr5 36719999 36721394 -162908756 + L1MA4 LINE L1 4768 6422 -60 536 171 9 0 chr5 36721402 36721513 -162908637 + L1MA4 LINE L1 6174 6285 -15 48 77 0 0 chr5 36721524 36721628 -162908522 + AT_rich Low_complexity Low_complexity 1 104 0 21 0 0 0 chr5 36721682 36721703 -162908447 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 36722078 36722100 -162908050 + AT_rich Low_complexity Low_complexity 1 22 0 820 187 0 0 chr5 36722565 36722715 -162907435 - Tigger1 DNA MER2_type -3 2415 2266 9573 106 14 31 chr5 36722746 36724248 -162905902 + L1PA13 LINE L1 433 1909 -4237 565 159 40 24 chr5 36724252 36724378 -162905772 - Tigger1 DNA MER2_type -161 2257 2130 * 2295 165 61 57 chr5 36724367 36724876 -162905274 - Tigger1 DNA MER2_type -1665 753 243 2280 204 44 25 chr5 36724876 36725444 -162904706 - L1P LINE L1 -2431 3715 3137 * 5399 171 41 12 chr5 36725443 36726740 -162903410 + L1PA13 LINE L1 4164 5496 -672 641 234 31 42 chr5 36726787 36726979 -162903171 + L1MC3 LINE L1 6920 7109 -676 330 26 0 0 chr5 36726982 36727021 -162903129 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3932 157 8 1 chr5 36727022 36727684 -162902466 + L1PA13 LINE L1 5493 6158 -5 1001 206 36 24 chr5 36727686 36727933 -162902217 - Tigger1 DNA MER2_type -2168 250 1 6710 189 46 21 chr5 36728313 36730065 -162900085 + L1MA3 LINE L1 2629 4482 -3083 2126 144 11 8 chr5 36730065 36730419 -162899731 + THE1A LTR MaLR 1 355 0 6710 189 46 21 chr5 36730419 36731418 -162898732 + L1MA3 LINE L1 4482 5454 -2111 6326 163 16 3 chr5 36731430 36733317 -162896833 + L1MA3 LINE L1 5818 7723 -1 255 358 43 12 chr5 36733559 36733721 -162896429 + MER115 DNA AcHobo 1 167 -526 404 341 24 6 chr5 36733855 36734022 -162896128 - MIR SINE MIR -58 204 35 34 42 0 0 chr5 36734518 36734566 -162895584 + AT_rich Low_complexity Low_complexity 1 48 0 3594 94 2 2 chr5 36734637 36735118 -162895032 + THE1B-int LTR MaLR 1100 1580 0 1844 122 0 90 chr5 36735120 36735464 -162894686 + THE1B LTR MaLR 3 315 -49 21 57 0 0 chr5 36736086 36736121 -162894029 + AT_rich Low_complexity Low_complexity 1 35 0 411 330 145 51 chr5 36736476 36736930 -162893220 + L2 LINE L2 2817 3313 0 766 166 0 28 chr5 36739188 36739333 -162890817 - FLAM_C SINE Alu 0 143 3 344 284 72 50 chr5 36739450 36739728 -162890422 + L2 LINE L2 1799 2082 -1232 2477 166 18 0 chr5 36739905 36740352 -162889798 - L1MA8 LINE L1 -22 6269 5815 394 170 149 0 chr5 36740357 36740451 -162889699 + L1MA4 LINE L1 5748 5855 -445 198 0 0 0 chr5 36742188 36742210 -162887940 + (CAT)n Simple_repeat Simple_repeat 3 24 0 2008 80 40 4 chr5 36742876 36743198 -162886952 + AluSq SINE Alu 1 332 0 25 65 0 0 chr5 36744707 36744753 -162885397 + AT_rich Low_complexity Low_complexity 1 46 0 236 283 0 0 chr5 36745137 36745190 -162884960 + (CATA)n Simple_repeat Simple_repeat 3 55 0 460 357 68 51 chr5 36745322 36745792 -162884358 + MLT1H LTR MaLR 2 479 -70 427 232 63 79 chr5 36745794 36745984 -162884166 - L1MEd LINE L1 -4930 1189 1003 927 248 12 28 chr5 36745986 36746240 -162883910 + MLT1A1 LTR MaLR 114 363 -2 335 343 46 29 chr5 36746266 36746466 -162883684 + L1ME LINE L1 1253 1605 -5002 25 65 0 0 chr5 36746559 36746605 -162883545 + AT_rich Low_complexity Low_complexity 1 46 0 4726 182 52 0 chr5 36746613 36747837 -162882313 + L1PA16 LINE L1 4927 6209 0 319 220 61 8 chr5 36747876 36747990 -162882160 + L1ME LINE L1 1586 1824 -4602 3108 286 68 24 chr5 36748015 36749768 -162880382 + L1ME LINE L1 3538 5368 -1058 1404 261 98 1 chr5 36749827 36750360 -162879790 + L1ME LINE L1 5467 6052 -394 453 242 35 116 chr5 36750426 36750721 -162879429 + L1MB7 LINE L1 5667 5925 -317 1950 138 0 3 chr5 36750721 36751018 -162879132 + AluSx SINE Alu 1 296 -16 453 242 35 116 chr5 36751018 36751100 -162879050 + L1MB7 LINE L1 5925 6012 -230 243 306 69 7 chr5 36751125 36751269 -162878881 + L1MA10 LINE L1 6179 6331 -3 877 76 0 0 chr5 36751605 36751723 -162878427 + L1PA5 LINE L1 6037 6154 0 23 33 0 0 chr5 36751946 36751976 -162878174 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr5 36752533 36752573 -162877577 + AT_rich Low_complexity Low_complexity 1 40 0 208 313 15 30 chr5 36752777 36752844 -162877306 - MIR SINE MIR -151 111 46 2353 81 0 3 chr5 36753116 36753426 -162876724 + AluY SINE Alu 1 309 -2 249 33 0 0 chr5 36753426 36753456 -162876694 + (TA)n Simple_repeat Simple_repeat 2 31 0 1404 202 184 12 chr5 36753693 36754117 -162876033 - L1MA3 LINE L1 -1 6304 5806 249 33 0 0 chr5 36754150 36754180 -162875970 + (TA)n Simple_repeat Simple_repeat 2 31 0 1661 165 170 16 chr5 36754541 36754911 -162875239 + MSTA LTR MaLR 1 427 -1 20276 157 40 12 chr5 36755009 36758799 -162871351 + L1M1 LINE L1 12 3915 -3650 732 151 16 0 chr5 36758804 36758930 -162871220 + AluSq/x SINE Alu 1 128 -184 2732 121 56 21 chr5 36759036 36759516 -162870634 + L1MA3 LINE L1 5808 6304 -1 482 0 0 17 chr5 36760506 36760565 -162869585 + (TATAA)n Simple_repeat Simple_repeat 5 62 0 25 0 0 0 chr5 36761022 36761047 -162869103 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr5 36762471 36762502 -162867648 + AT_rich Low_complexity Low_complexity 1 31 0 211 304 114 114 chr5 36764330 36764514 -162865636 - MIR SINE MIR -59 203 20 213 315 89 48 chr5 36764625 36764756 -162865394 + MIR SINE MIR 20 154 -63 30 0 0 0 chr5 36764806 36764836 -162865314 + AT_rich Low_complexity Low_complexity 1 30 0 551 232 85 17 chr5 36765229 36765406 -162864744 + MER5A DNA MER1_type 1 189 0 329 306 74 9 chr5 36765539 36765647 -162864503 - L2 LINE L2 -3 3269 3155 241 344 16 23 chr5 36766281 36766409 -162863741 - L2 LINE L2 -999 2315 2189 1535 210 45 81 chr5 36767651 36768118 -162862032 - MLT1C LTR MaLR -17 450 1 2199 122 0 0 chr5 36768153 36768464 -162861686 + AluSx SINE Alu 1 311 -1 222 171 0 0 chr5 36769942 36769983 -162860167 + (TA)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr5 36770146 36770181 -162859969 + AT_rich Low_complexity Low_complexity 1 35 0 2214 99 0 3 chr5 36770565 36770858 -162859292 + AluSc SINE Alu 1 292 -17 267 114 0 0 chr5 36770965 36771009 -162859141 + (T)n Simple_repeat Simple_repeat 1 44 0 447 68 0 0 chr5 36771121 36771180 -162858970 + (TA)n Simple_repeat Simple_repeat 1 59 0 520 321 29 44 chr5 36771455 36771795 -162858355 - MLT1J1 LTR MaLR 0 446 112 361 240 20 60 chr5 36771945 36772095 -162858055 - L1MC5 LINE L1 -182 7779 7636 206 293 23 83 chr5 36772386 36772519 -162857631 - MIR3 SINE MIR -52 156 32 198 318 91 0 chr5 36775273 36775339 -162854811 + MIR SINE MIR 120 191 -71 2030 96 17 3 chr5 36776010 36776302 -162853848 + AluSc SINE Alu 1 296 -13 182 315 0 76 chr5 36777010 36777102 -162853048 + MER5A DNA MER1_type 23 107 -82 221 283 172 0 chr5 36777359 36777458 -162852692 + MIR SINE MIR 145 260 -2 23 0 0 0 chr5 36777733 36777756 -162852394 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr5 36777820 36777850 -162852300 + AT_rich Low_complexity Low_complexity 1 30 0 2140 73 42 0 chr5 36777909 36778196 -162851954 - AluY SINE Alu -12 299 1 2072 99 0 0 chr5 36778801 36779119 -162851031 - AluSc SINE Alu 0 318 1 2114 118 3 13 chr5 36779119 36779433 -162850717 - AluSx SINE Alu 0 312 1 43 35 0 0 chr5 36779727 36779784 -162850366 + AT_rich Low_complexity Low_complexity 1 57 0 1986 103 4 0 chr5 36780633 36780905 -162849245 + AluSc SINE Alu 35 307 -2 2175 99 3 0 chr5 36781183 36781477 -162848673 + AluY SINE Alu 1 295 -16 3302 234 40 43 chr5 36781609 36782638 -162847512 + L1PA12 LINE L1 2234 3266 -4318 2136 120 10 0 chr5 36782638 36782938 -162847212 - AluSx SINE Alu -9 303 1 3302 234 40 43 chr5 36782938 36783138 -162847012 + L1PA12 LINE L1 3266 3465 -4119 3162 143 76 27 chr5 36783142 36783777 -162846373 + L1PA16 LINE L1 5490 6155 -11 25 0 0 0 chr5 36783928 36783953 -162846197 + AT_rich Low_complexity Low_complexity 1 25 0 193 350 68 29 chr5 36784205 36784308 -162845842 + MIR SINE MIR 18 124 -138 36 87 0 0 chr5 36784385 36784477 -162845673 + AT_rich Low_complexity Low_complexity 1 92 0 21 36 0 0 chr5 36784576 36784604 -162845546 + AT_rich Low_complexity Low_complexity 1 28 0 611 250 0 91 chr5 36784994 36785214 -162844936 - L2 LINE L2 -2 3311 3112 631 42 21 11 chr5 36785464 36785559 -162844591 + (TCTA)n Simple_repeat Simple_repeat 3 98 0 334 344 25 25 chr5 36836784 36836947 -162793203 - MIR SINE MIR -97 165 3 334 369 63 11 chr5 36838075 36838343 -162791807 - L1M4 LINE L1 -1300 4846 4565 1987 191 10 23 chr5 36839375 36839904 -162790246 - L1M2 LINE L1 -643 5648 5131 417 108 15 0 chr5 36839901 36839966 -162790184 - L1MA7 LINE L1 -444 5847 5782 * 397 289 75 35 chr5 36840307 36840535 -162789615 + L1MC/D LINE L1 4777 5013 -1133 264 246 117 35 chr5 36840743 36840914 -162789236 + L1MC/D LINE L1 5265 5449 -2359 248 186 17 0 chr5 36843203 36843262 -162786888 + (TA)n Simple_repeat Simple_repeat 2 61 0 541 237 9 0 chr5 36843262 36843376 -162786774 - MLT1B LTR MaLR -273 117 3 286 175 67 17 chr5 36843455 36843575 -162786575 + (TA)n Simple_repeat Simple_repeat 1 126 0 1990 143 19 10 chr5 36844220 36844528 -162785622 + AluSx SINE Alu 2 312 0 252 264 36 50 chr5 36844535 36844675 -162785475 + MER93a LTR ERV1 117 254 -148 * 374 301 21 21 chr5 36844653 36844796 -162785354 + MER93a LTR ERV1 201 343 -59 21 0 0 0 chr5 36845150 36845171 -162784979 + AT_rich Low_complexity Low_complexity 1 21 0 263 238 24 12 chr5 36846418 36846502 -162783648 + L1M4 LINE L1 2944 3028 -3118 330 234 61 30 chr5 36846553 36846784 -162783366 + L1M4 LINE L1 3029 3266 -2880 276 98 0 0 chr5 36846785 36846826 -162783324 + Tigger1 DNA MER2_type 575 615 -1803 2068 109 0 35 chr5 36846827 36847138 -162783012 - AluSx SINE Alu -12 300 1 962 204 44 19 chr5 36847328 36847770 -162782380 - Charlie5 DNA MER1_type 0 2621 17 23 54 0 0 chr5 36848061 36848098 -162782052 + AT_rich Low_complexity Low_complexity 1 37 0 450 95 214 0 chr5 36848273 36848357 -162781793 + L1PA8 LINE L1 6041 6142 -30 280 153 68 0 chr5 36848359 36848418 -162781732 + L1PA8A LINE L1 6038 6100 -31 247 177 65 0 chr5 36848391 36848453 -162781697 + L1PA8A LINE L1 6038 6103 -28 * 259 164 66 0 chr5 36848488 36848549 -162781601 + L1PA8A LINE L1 6039 6103 -28 259 164 66 0 chr5 36848520 36848581 -162781569 + L1PA8A LINE L1 6039 6103 -28 259 164 66 0 chr5 36848584 36848645 -162781505 + L1PA8A LINE L1 6039 6103 -28 266 169 68 0 chr5 36848650 36848709 -162781441 + L1PA8A LINE L1 6041 6103 -28 * 398 59 0 0 chr5 36848680 36848731 -162781419 + L1PA8 LINE L1 6078 6128 -44 376 294 46 50 chr5 36848832 36848930 -162781220 + HAL1 LINE L1 964 1061 -1446 2571 45 0 7 chr5 36848930 36849239 -162780911 + AluY SINE Alu 1 307 -4 376 294 46 50 chr5 36849239 36849358 -162780792 + HAL1 LINE L1 1061 1180 -1327 234 272 10 39 chr5 36849473 36849576 -162780574 + HAL1 LINE L1 1388 1487 -1020 311 296 81 81 chr5 36849610 36849736 -162780414 + HAL1 LINE L1 1600 1725 -782 2048 129 16 0 chr5 36849736 36850039 -162780111 + AluSx SINE Alu 1 308 -4 311 296 81 81 chr5 36850039 36850352 -162779798 + HAL1 LINE L1 1725 2042 -465 1974 126 3 20 chr5 36850352 36850654 -162779496 + AluSg SINE Alu 1 297 -13 311 296 81 81 chr5 36850654 36850795 -162779355 + HAL1 LINE L1 2041 2181 -326 199 326 0 0 chr5 36851523 36851572 -162778578 + MIR SINE MIR 98 146 -62 237 348 85 0 chr5 36851734 36851898 -162778252 - MIR SINE MIR -71 191 14 398 143 13 13 chr5 36852117 36852194 -162777956 - Tigger1 DNA MER2_type -476 1942 1866 1571 160 4 0 chr5 36852197 36852472 -162777678 + AluSg SINE Alu 37 312 0 1150 142 37 50 chr5 36852484 36852702 -162777448 + AluSx SINE Alu 44 258 -54 218 123 15 46 chr5 36852745 36852810 -162777340 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 643 362 91 19 chr5 36853510 36854154 -162775996 + L2 LINE L2 2365 3048 -265 6271 158 22 15 chr5 36854542 36855654 -162774496 - Tigger1 DNA MER2_type -1298 1120 1 23 33 0 0 chr5 36855765 36855795 -162774355 + AT_rich Low_complexity Low_complexity 1 30 0 6447 35 8 2 chr5 36855798 36856982 -162773168 + L1P2 LINE L1 4590 5776 -379 5448 180 16 25 chr5 36857375 36857583 -162772567 + L1PB3 LINE L1 4194 4402 -1752 318 67 0 0 chr5 36857583 36857628 -162772522 + (CAATA)n Simple_repeat Simple_repeat 2 46 0 5448 180 16 25 chr5 36857628 36859397 -162770753 + L1PB3 LINE L1 4402 6151 -3 3180 219 101 10 chr5 36859448 36860148 -162770002 + MER21B LTR ERV1 55 818 -45 231 364 58 0 chr5 36861777 36861898 -162768252 + MIR SINE MIR 49 176 -86 1648 205 5 54 chr5 36862423 36862833 -162767317 + MLT1B LTR MaLR 1 390 0 186 207 83 136 chr5 36863035 36863204 -162766946 + L2 LINE L2 3136 3295 -18 23 33 0 0 chr5 36863446 36863476 -162766674 + AT_rich Low_complexity Low_complexity 1 30 0 3567 241 63 42 chr5 36865099 36866429 -162763721 + L1 LINE L1 3941 5298 -848 3438 207 62 6 chr5 36866431 36867478 -162762672 + L1P4 LINE L1 4376 5473 -693 6951 55 0 0 chr5 36867478 36868600 -162761550 - L1PA6 LINE L1 -3 6151 5030 1317 195 4 4 chr5 36868703 36868939 -162761211 - AluSq SINE Alu -77 236 1 233 303 55 9 chr5 36868993 36869102 -162761048 + L2 LINE L2 1587 1700 -1614 2451 286 80 95 chr5 36870084 36871850 -162758300 + L2 LINE L2 262 2002 -1312 669 294 35 51 chr5 36871889 36872144 -162758006 + L2 LINE L2 2553 2803 -511 2020 83 0 104 chr5 36872144 36872482 -162757668 + AluSg SINE Alu 1 303 -7 294 227 28 28 chr5 36872707 36872848 -162757302 + G-rich Low_complexity Low_complexity 2 142 0 403 302 90 37 chr5 36872969 36873237 -162756913 + L2 LINE L2 2996 3277 -36 851 189 87 5 chr5 36873638 36873823 -162756327 + L1MC1 LINE L1 6128 6327 -6 299 336 73 69 chr5 36874203 36874450 -162755700 - MIR SINE MIR -12 250 3 384 362 93 47 chr5 36875413 36875907 -162754243 + MLT1K LTR MaLR 70 586 -2 23 0 0 0 chr5 36876118 36876141 -162754009 + AT_rich Low_complexity Low_complexity 1 23 0 234 62 0 0 chr5 36876540 36876572 -162753578 + (CA)n Simple_repeat Simple_repeat 2 33 0 10964 212 21 51 chr5 36876572 36879486 -162750664 + L1M1 LINE L1 13 3236 -4329 1779 148 18 0 chr5 36879486 36879763 -162750387 - AluSx SINE Alu -6 306 25 10964 212 21 51 chr5 36879763 36879912 -162750238 + L1M1 LINE L1 3236 3388 -4177 8563 220 50 9 chr5 36880319 36882560 -162747590 + L1M1 LINE L1 3496 5827 -1738 1099 228 19 0 chr5 36882541 36882848 -162747302 + L1 LINE L1 4306 4618 -2947 * 2949 186 49 9 chr5 36883611 36884260 -162745890 - L1MB1 LINE L1 -3 6165 5491 21 0 0 0 chr5 36884291 36884312 -162745838 + AT_rich Low_complexity Low_complexity 1 21 0 1913 141 0 0 chr5 36884337 36884646 -162745504 - AluSx SINE Alu 0 309 1 252 234 47 75 chr5 36886035 36886142 -162744008 - MIR SINE MIR -105 157 54 22 80 0 0 chr5 36886190 36886240 -162743910 + AT_rich Low_complexity Low_complexity 1 50 0 541 175 111 16 chr5 36886534 36886660 -162743490 - MER58B DNA MER1_type 0 341 204 17773 52 12 35 chr5 36886671 36889131 -162741019 - L1PA4 LINE L1 -1586 4560 2157 7152 47 6 0 chr5 36889131 36890734 -162739416 + L1PA4 LINE L1 4548 6155 0 257 183 33 0 chr5 36890764 36890824 -162739326 + (CATATA)n Simple_repeat Simple_repeat 1 62 0 242 333 24 16 chr5 36890937 36891060 -162739090 + MIR SINE MIR 126 249 -13 345 223 0 0 chr5 36892531 36892625 -162737525 + (TA)n Simple_repeat Simple_repeat 2 95 0 21 36 0 0 chr5 36893788 36893816 -162736334 + AT_rich Low_complexity Low_complexity 1 28 0 237 65 0 0 chr5 36894164 36894195 -162735955 + (TA)n Simple_repeat Simple_repeat 2 32 0 26 50 0 0 chr5 36894882 36894922 -162735228 + AT_rich Low_complexity Low_complexity 1 40 0 189 107 0 0 chr5 36895378 36895406 -162734744 + (CA)n Simple_repeat Simple_repeat 2 29 0 27 29 0 0 chr5 36895949 36895983 -162734167 + AT_rich Low_complexity Low_complexity 1 34 0 257 208 0 0 chr5 36898043 36898091 -162732059 + L2 LINE L2 3195 3242 -71 2346 21 7 3 chr5 36898982 36899264 -162730886 + AluYa5 SINE Alu 1 283 -28 204 40 0 0 chr5 36900566 36900591 -162729559 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 245 29 29 0 chr5 36900590 36900624 -162729526 + (TG)n Simple_repeat Simple_repeat 2 36 0 339 194 0 0 chr5 36901191 36901284 -162728866 + (TA)n Simple_repeat Simple_repeat 2 94 0 22 0 0 0 chr5 36902081 36902103 -162728047 + AT_rich Low_complexity Low_complexity 1 22 0 258 105 0 0 chr5 36902557 36902595 -162727555 + (TA)n Simple_repeat Simple_repeat 1 38 0 197 133 0 0 chr5 36902721 36902751 -162727399 - L2 LINE L2 -15 3298 3269 49 76 0 0 chr5 36903895 36904000 -162726150 + AT_rich Low_complexity Low_complexity 1 105 0 293 348 135 10 chr5 36904545 36904752 -162725398 + MIR SINE MIR 12 244 -18 22 35 0 0 chr5 36904968 36904997 -162725153 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr5 36905079 36905106 -162725044 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1312 221 40 63 chr5 36905269 36905744 -162724406 - MLT2C2 LTR ERVL 0 464 1 31 68 0 0 chr5 36905826 36905885 -162724265 + AT_rich Low_complexity Low_complexity 1 59 0 2052 131 3 10 chr5 36906950 36907263 -162722887 + AluSx SINE Alu 1 311 -1 277 215 15 0 chr5 36907323 36907388 -162722762 - MER89 LTR ERV1 -9 550 485 1075 249 46 11 chr5 36907492 36907930 -162722220 - MER89 LTR ERV1 -32 527 1 227 27 0 54 chr5 36907953 36907990 -162722160 + (CAAAAA)n Simple_repeat Simple_repeat 3 37 0 800 137 0 46 chr5 36907991 36908122 -162722028 + AluSq/x SINE Alu 1 125 -188 197 86 57 0 chr5 36908122 36908157 -162721993 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 27 29 0 0 chr5 36908266 36908300 -162721850 + AT_rich Low_complexity Low_complexity 1 34 0 360 306 157 20 chr5 36909996 36910404 -162719746 + HAL1b LINE L1 83 546 -802 261 31 0 0 chr5 36910582 36910614 -162719536 - AluSc SINE Alu -13 286 255 638 307 91 66 chr5 36910748 36911282 -162718868 - L2 LINE L2 0 3313 2766 1850 196 6 3 chr5 36911343 36911675 -162718475 + MER7A DNA MER2_type 16 346 0 1689 218 3 3 chr5 36911835 36912161 -162717989 + MLT1A1 LTR MaLR 1 326 -39 23 33 0 0 chr5 36912806 36912836 -162717314 + AT_rich Low_complexity Low_complexity 1 30 0 272 336 64 0 chr5 36912957 36913067 -162717083 + MER110-int LTR ERV1 4336 4452 -195 640 260 129 54 chr5 36913070 36913168 -162716982 + MER110 LTR ERV1 116 205 -286 1291 198 65 47 chr5 36913168 36913506 -162716644 + MER2 DNA MER2_type 1 344 0 640 260 129 54 chr5 36913506 36913757 -162716393 + MER110 LTR ERV1 205 491 0 547 85 43 38 chr5 36915573 36915789 -162714361 + (TA)n Simple_repeat Simple_repeat 1 217 0 314 112 61 10 chr5 36916043 36916141 -162714009 + (TA)n Simple_repeat Simple_repeat 2 104 0 541 104 0 0 chr5 36916142 36916219 -162713931 - AluY SINE Alu -30 281 205 351 0 0 0 chr5 36916243 36916282 -162713868 + (TG)n Simple_repeat Simple_repeat 2 40 0 225 0 0 0 chr5 36916419 36916444 -162713706 + (CA)n Simple_repeat Simple_repeat 2 26 0 2104 115 7 0 chr5 36918281 36918577 -162711573 + AluSx SINE Alu 1 298 -14 2430 72 0 0 chr5 36919286 36919592 -162710558 - AluY SINE Alu -5 306 1 21 0 0 0 chr5 36920116 36920137 -162710013 + AT_rich Low_complexity Low_complexity 1 21 0 1705 262 40 38 chr5 36920842 36921415 -162708735 + MLT1E LTR MaLR 17 590 -3 617 282 126 27 chr5 36921661 36921962 -162708188 + MLT1G1 LTR MaLR 263 593 -2 26 30 0 0 chr5 36922954 36922987 -162707163 + AT_rich Low_complexity Low_complexity 1 33 0 3228 137 27 14 chr5 36923150 36923601 -162706549 - L1MA8 LINE L1 -3 6288 5826 1912 113 3 61 chr5 36923601 36923912 -162706238 - AluSc SINE Alu -16 293 1 3228 137 27 14 chr5 36923912 36924051 -162706099 - L1MA8 LINE L1 -465 5826 5690 1411 180 45 14 chr5 36924213 36924784 -162705366 + L1PA16 LINE L1 5473 6122 -44 3689 152 25 126 chr5 36924836 36925294 -162704856 + L1MB1 LINE L1 5309 5811 -357 1695 126 0 4 chr5 36925294 36925548 -162704602 + AluSx SINE Alu 1 253 -59 3689 152 25 126 chr5 36925548 36925684 -162704466 + L1MB1 LINE L1 5811 5959 -209 2168 102 3 13 chr5 36925684 36925987 -162704163 + AluY SINE Alu 3 302 -9 3689 152 25 126 chr5 36925987 36926347 -162703803 + L1MB1 LINE L1 5959 6168 0 224 282 81 54 chr5 36928096 36928245 -162701905 - MIR SINE MIR -34 228 76 1644 120 47 63 chr5 36928253 36928570 -162701580 - AluSq SINE Alu -1 312 1 1335 174 25 73 chr5 36928956 36929184 -162700966 + MLT1A1 LTR MaLR 1 207 -158 2049 126 38 3 chr5 36929184 36929526 -162700624 + THE1A LTR MaLR 2 355 0 1335 174 25 73 chr5 36929526 36929653 -162700497 + MLT1A1 LTR MaLR 207 339 -26 2476 55 0 7 chr5 36929653 36929963 -162700187 - AluY SINE Alu 0 311 4 235 189 14 14 chr5 36931982 36932056 -162698094 + (TA)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr5 36932662 36932684 -162697466 + AT_rich Low_complexity Low_complexity 1 22 0 367 343 77 33 chr5 36933137 36933502 -162696648 + HAL1 LINE L1 368 748 -1759 473 321 74 5 chr5 36934062 36934277 -162695873 + MIR SINE MIR 31 260 -2 310 371 26 0 chr5 36934874 36935025 -162695125 + MIR SINE MIR 96 250 -12 21 57 0 0 chr5 36935078 36935113 -162695037 + AT_rich Low_complexity Low_complexity 1 35 0 6185 68 2 0 chr5 36935906 36936701 -162693449 - L1PA8 LINE L1 -1 6171 5375 181 280 20 0 chr5 36938316 36938366 -162691784 - MIR SINE MIR -56 152 102 192 319 58 0 chr5 36938462 36938531 -162691619 + MIR SINE MIR 68 140 -122 206 348 22 22 chr5 36939406 36939495 -162690655 + MIR3 SINE MIR 101 189 -19 1010 155 0 6 chr5 36939807 36939981 -162690169 + AluSg/x SINE Alu 140 312 0 183 80 0 0 chr5 36940183 36940208 -162689942 + (T)n Simple_repeat Simple_repeat 1 25 0 605 256 7 114 chr5 36940845 36941126 -162689024 - MER31B LTR ERV1 -5 461 211 442 181 62 49 chr5 36941223 36941367 -162688783 - MER51D LTR ERV1 -43 614 469 311 220 44 11 chr5 36941824 36941915 -162688235 - MER31B LTR ERV1 -372 94 1 232 284 20 20 chr5 36942530 36942632 -162687518 + CT-rich Low_complexity Low_complexity 3 104 0 1033 233 5 98 chr5 36942661 36943047 -162687103 + MLT1A1 LTR MaLR 14 363 -2 206 167 0 56 chr5 36943293 36943320 -162686830 + T-rich Low_complexity Low_complexity 5 29 -26 3051 48 8 0 chr5 36943320 36943698 -162686452 - L1PA5 LINE L1 -4 6150 5770 206 167 0 56 chr5 36943698 36943724 -162686426 + T-rich Low_complexity Low_complexity 29 55 0 24 53 0 0 chr5 36943851 36943889 -162686261 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr5 36944859 36944897 -162685253 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr5 36945241 36945262 -162684888 + AT_rich Low_complexity Low_complexity 1 21 0 2128 104 0 30 chr5 36945469 36945767 -162684383 + AluSq SINE Alu 1 289 -24 2447 128 8 0 chr5 36946170 36946530 -162683620 - THE1B LTR MaLR 0 364 2 370 305 8 17 chr5 36946583 36946701 -162683449 + L2 LINE L2 3197 3313 0 2131 172 27 5 chr5 36947781 36948187 -162681963 + L1PA13 LINE L1 5743 6157 -6 373 240 12 2 chr5 36949117 36949221 -162680929 - L1M4 LINE L1 -1999 4147 4044 23 33 0 0 chr5 36949354 36949384 -162680766 + AT_rich Low_complexity Low_complexity 1 30 0 1974 119 27 7 chr5 36949386 36949681 -162680469 + AluSx SINE Alu 1 301 -11 2206 127 0 0 chr5 36950041 36950341 -162679809 + AluSx SINE Alu 1 300 -12 234 284 30 0 chr5 36952705 36952772 -162677378 + GA-rich Low_complexity Low_complexity 3 71 0 24 0 0 0 chr5 36954098 36954122 -162676028 + AT_rich Low_complexity Low_complexity 1 24 0 25 75 0 0 chr5 36954617 36954670 -162675480 + AT_rich Low_complexity Low_complexity 1 53 0 3217 55 0 0 chr5 36956672 36957073 -162673077 + L1PA4 LINE L1 5753 6153 -2 1556 329 71 24 chr5 36957229 36957979 -162672171 + L1M4c LINE L1 423 1207 -5096 1687 269 44 38 chr5 36958048 36958848 -162671302 + L1M4c LINE L1 1029 1833 -4551 2876 254 68 15 chr5 36958920 36960626 -162669524 + L1M4c LINE L1 2054 3879 -2503 290 154 29 0 chr5 36960889 36960953 -162669197 - Alu SINE Alu -7 295 245 297 0 0 0 chr5 36960953 36960986 -162669164 + (T)n Simple_repeat Simple_repeat 1 33 0 744 107 82 0 chr5 36960986 36961108 -162669042 - AluSq/x SINE Alu -179 133 2 555 260 138 86 chr5 36961627 36961896 -162668254 - L2 LINE L2 -836 2478 2196 425 382 62 6 chr5 36961912 36962090 -162668060 + MER91A DNA MER1_type 8 195 -1 1133 293 86 34 chr5 36962270 36962803 -162667347 - L2 LINE L2 -1203 2111 1551 249 33 0 0 chr5 36962804 36962834 -162667316 + (CA)n Simple_repeat Simple_repeat 2 31 0 1494 206 17 63 chr5 36962975 36963325 -162666825 + MLT1B LTR MaLR 57 390 0 21 36 0 0 chr5 36963804 36963832 -162666318 + AT_rich Low_complexity Low_complexity 1 28 0 184 150 67 67 chr5 36964009 36964069 -162666081 + L3 LINE CR1 776 835 -742 22 70 0 0 chr5 36964412 36964455 -162665695 + AT_rich Low_complexity Low_complexity 1 43 0 846 261 46 42 chr5 36965269 36965735 -162664415 - LTR40c LTR ERVL 0 519 5 230 259 35 0 chr5 36965796 36965854 -162664296 + L2 LINE L2 3237 3296 -17 420 353 47 22 chr5 36965961 36966193 -162663957 - L2 LINE L2 -554 2760 2523 53 78 0 0 chr5 36966338 36966454 -162663696 + AT_rich Low_complexity Low_complexity 1 116 0 23 0 0 0 chr5 36967105 36967128 -162663022 + AT_rich Low_complexity Low_complexity 1 23 0 269 206 48 16 chr5 36967979 36968042 -162662108 + MER116 DNA Mariner 1 65 -15 450 265 200 14 chr5 36968052 36968267 -162661883 - MIR SINE MIR 0 262 8 671 204 0 0 chr5 36968808 36968945 -162661205 - FRAM SINE Alu -1 175 39 1846 177 0 0 chr5 36969037 36969347 -162660803 + AluSx SINE Alu 1 310 -2 2153 86 4 4 chr5 36970814 36971145 -162659005 + AluSc SINE Alu 1 331 0 4025 152 47 5 chr5 36972596 36973342 -162656808 + L1MA4A LINE L1 5515 6291 -12 393 320 102 27 chr5 36973366 36973591 -162656559 - MIR SINE MIR -19 243 2 1994 134 56 20 chr5 36974069 36974427 -162655723 - THE1C LTR MaLR 0 375 5 228 357 91 46 chr5 36974525 36974788 -162655362 + MLT1K LTR MaLR 278 552 -36 198 295 69 81 chr5 36975656 36975829 -162654321 - L2 LINE L2 -1362 1952 1782 27 73 0 0 chr5 36977968 36978023 -162652127 + AT_rich Low_complexity Low_complexity 1 55 0 269 369 15 23 chr5 36978162 36978292 -162651858 - L2 LINE L2 -655 2659 2531 230 240 0 0 chr5 36978374 36978424 -162651726 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 15848 148 16 8 chr5 36978581 36982135 -162648015 + L1PA10 LINE L1 2584 6164 -4 213 132 0 0 chr5 36982218 36982256 -162647894 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1381 272 62 14 chr5 36983160 36983598 -162646552 + MLT1C LTR MaLR 4 462 -5 22 0 0 0 chr5 36984105 36984127 -162646023 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 36984611 36984639 -162645511 + AT_rich Low_complexity Low_complexity 1 28 0 364 186 0 0 chr5 36985059 36985152 -162644998 - AluJ/FRAM SINE Alu 0 316 224 1069 263 40 54 chr5 36985384 36985840 -162644310 - MLT1E2 LTR MaLR -184 442 1 478 356 121 11 chr5 36985841 36986288 -162643862 - L1MEc LINE L1 -5789 607 112 23 0 0 0 chr5 36987581 36987604 -162642546 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 36987756 36987777 -162642373 + AT_rich Low_complexity Low_complexity 1 21 0 1911 126 51 7 chr5 36989133 36989427 -162640723 - AluSq SINE Alu -4 309 3 381 22 0 0 chr5 36989972 36990018 -162640132 + (CA)n Simple_repeat Simple_repeat 2 47 0 1577 111 0 0 chr5 36992175 36992392 -162637758 - AluSg/x SINE Alu -5 307 91 198 71 0 0 chr5 36992549 36992577 -162637573 + (TTA)n Simple_repeat Simple_repeat 1 28 0 272 191 56 34 chr5 36992674 36992763 -162637387 - L1MC4 LINE L1 -1338 6704 6614 222 219 0 0 chr5 36992765 36992806 -162637344 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 443 345 58 34 chr5 36992817 36993145 -162637005 - L1 LINE L1 -1114 5032 4697 196 212 30 0 chr5 36994567 36994633 -162635517 + (TA)n Simple_repeat Simple_repeat 2 69 0 1746 144 55 38 chr5 36994637 36995004 -162635146 - THE1C LTR MaLR -2 373 1 8841 150 19 34 chr5 36995009 36996606 -162633544 - THE1C-int LTR MaLR -5 1575 4 1621 162 68 41 chr5 36996609 36996974 -162633176 - THE1C LTR MaLR 0 375 1 309 183 0 0 chr5 36996974 36997034 -162633116 + (CA)n Simple_repeat Simple_repeat 1 60 0 2079 125 3 0 chr5 36997526 36997822 -162632328 + AluSg SINE Alu 1 297 -13 47 0 0 0 chr5 36998428 36998475 -162631675 + AT_rich Low_complexity Low_complexity 1 47 0 300 27 0 0 chr5 36998680 36998717 -162631433 + (TG)n Simple_repeat Simple_repeat 2 38 0 232 393 17 38 chr5 36999748 37000038 -162630112 - L2 LINE L2 -475 2839 2556 1340 160 43 43 chr5 37000973 37001254 -162628896 - MSTB1 LTR MaLR 0 432 152 1865 167 0 0 chr5 37002453 37002758 -162627392 + AluSx SINE Alu 5 309 -3 2156 96 3 7 chr5 37003014 37003307 -162626843 - AluSg SINE Alu -18 292 1 31 26 0 0 chr5 37003351 37003389 -162626761 + AT_rich Low_complexity Low_complexity 1 38 0 512 283 168 23 chr5 37004381 37004554 -162625596 - MER58A DNA MER1_type -18 206 9 496 251 153 14 chr5 37004859 37005100 -162625050 + MLT1G LTR MaLR 14 249 -341 1006 197 46 115 chr5 37005245 37005636 -162624514 + MLT1A1 LTR MaLR 2 365 0 1175 118 0 12 chr5 37005663 37005833 -162624317 - AluSc SINE Alu -2 307 140 345 279 8 41 chr5 37005834 37005956 -162624194 + MLT1H1 LTR MaLR 438 555 0 195 293 58 92 chr5 37006111 37006285 -162623865 + L2 LINE L2 2327 2494 -820 268 339 132 28 chr5 37007620 37007909 -162622241 + L3 LINE CR1 843 1161 -416 224 335 114 18 chr5 37010902 37011129 -162619021 - MIR SINE MIR -13 249 1 22 0 0 0 chr5 37011228 37011250 -162618900 + AT_rich Low_complexity Low_complexity 1 22 0 243 313 75 34 chr5 37011536 37011683 -162618467 - MIR SINE MIR -10 252 100 22 0 0 0 chr5 37011768 37011790 -162618360 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 37012068 37012103 -162618047 + AT_rich Low_complexity Low_complexity 1 35 0 777 125 23 0 chr5 37012122 37012250 -162617900 - L1PA15 LINE L1 -1 6164 6034 203 95 48 0 chr5 37012250 37012292 -162617858 + T-rich Low_complexity Low_complexity 1 44 0 1667 196 0 10 chr5 37012292 37012604 -162617546 - AluJb SINE Alu -3 309 1 26 64 0 0 chr5 37013063 37013110 -162617040 + AT_rich Low_complexity Low_complexity 1 47 0 1252 68 6 0 chr5 37013409 37013571 -162616579 - L1PA12 LINE L1 -178 5990 5828 1290 107 25 0 chr5 37013571 37013765 -162616385 + L1PA12 LINE L1 5967 6167 -1 2358 69 10 10 chr5 37013770 37014075 -162616075 + AluY SINE Alu 3 307 -4 505 228 74 20 chr5 37014214 37014363 -162615787 - MIR SINE MIR -58 204 48 22 56 0 0 chr5 37014384 37014420 -162615730 + AT_rich Low_complexity Low_complexity 1 36 0 364 250 23 11 chr5 37014425 37014513 -162615637 + L1PA14 LINE L1 1 89 -7492 7932 18 7 1 chr5 37014521 37015605 -162614545 - L1HS LINE L1 0 6155 5060 414 39 0 0 chr5 37016091 37016143 -162614007 + (CA)n Simple_repeat Simple_repeat 2 53 0 4195 202 31 2 chr5 37016437 37017364 -162612786 + L1MC1 LINE L1 5181 6130 -203 23 54 0 0 chr5 37018203 37018240 -162611910 + AT_rich Low_complexity Low_complexity 1 37 0 260 311 0 0 chr5 37018555 37018616 -162611534 - MER5A DNA MER1_type -122 67 7 21 0 0 0 chr5 37018788 37018809 -162611341 + AT_rich Low_complexity Low_complexity 1 21 0 7968 23 3 0 chr5 37019135 37020095 -162610055 - L1P LINE L1 -758 5388 4426 * 8478 27 0 0 chr5 37020092 37021092 -162609058 + L1P LINE L1 3389 4388 -1758 9781 204 43 114 chr5 37021094 37024523 -162605627 + L1PA14 LINE L1 83 3288 -4296 * 11821 215 22 4 chr5 37024517 37027127 -162603023 + L1PA14 LINE L1 3753 6410 -1174 3552 131 23 70 chr5 37027120 37027867 -162602283 + L1PA14 LINE L1 6644 7355 -244 * 516 96 24 0 chr5 37028005 37028088 -162602062 - L1PA5 LINE L1 -5 6149 6065 1620 129 0 35 chr5 37028713 37029004 -162601146 - AluSx SINE Alu 0 317 36 715 367 46 26 chr5 37029195 37029735 -162600415 - HERVL LTR ERVL -3424 2230 1680 180 0 0 0 chr5 37029735 37029755 -162600395 + (TTG)n Simple_repeat Simple_repeat 3 22 0 446 363 23 33 chr5 37030126 37030520 -162599630 - HERVL LTR ERVL -4358 1296 907 2112 117 0 52 chr5 37030801 37031127 -162599023 - AluSc SINE Alu 0 309 1 391 232 293 0 chr5 37031530 37031694 -162598456 - LTR50 LTR ERVL -4 791 580 729 268 206 5 chr5 37031879 37032267 -162597883 - LTR50 LTR ERVL -329 466 1 326 320 80 7 chr5 37032496 37032646 -162597504 - MIR SINE MIR -34 228 68 3142 194 31 16 chr5 37033772 37033793 -162596357 + L1MC2 LINE L1 5588 5607 -737 1892 104 41 4 chr5 37033793 37034062 -162596088 + AluSg SINE Alu 1 309 0 205 67 0 0 chr5 37034062 37034092 -162596058 + (CAA)n Simple_repeat Simple_repeat 1 180 0 3142 194 31 16 chr5 37034092 37034806 -162595344 + L1MC2 LINE L1 5607 6335 -9 21 0 0 0 chr5 37036826 37036847 -162593303 + AT_rich Low_complexity Low_complexity 1 21 0 600 114 23 0 chr5 37038259 37038390 -162591760 + (TA)n Simple_repeat Simple_repeat 2 135 0 21 36 0 0 chr5 37038400 37038428 -162591722 + AT_rich Low_complexity Low_complexity 1 28 0 24 53 0 0 chr5 37038656 37038694 -162591456 + AT_rich Low_complexity Low_complexity 1 38 0 273 182 0 0 chr5 37040206 37040261 -162589889 + CT-rich Low_complexity Low_complexity 1 55 0 21 36 0 0 chr5 37041394 37041422 -162588728 + AT_rich Low_complexity Low_complexity 1 28 0 186 229 21 21 chr5 37041546 37041594 -162588556 - L2 LINE L2 0 3313 3266 369 283 78 54 chr5 37042441 37042646 -162587504 + L2 LINE L2 3099 3308 -5 241 304 104 9 chr5 37042722 37042837 -162587313 - MIR SINE MIR -65 197 72 3716 199 49 39 chr5 37042984 37043837 -162586313 + L1MB3 LINE L1 6 870 -5514 216 0 0 0 chr5 37043837 37043861 -162586289 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3716 199 49 39 chr5 37043861 37043908 -162586242 + L1MB3 LINE L1 870 915 -5469 205 297 93 25 chr5 37043948 37044066 -162586084 + MIR SINE MIR 72 197 -65 6350 189 56 43 chr5 37044188 37046222 -162583928 + L1MB3 LINE L1 923 2978 -3404 2931 275 112 16 chr5 37046243 37046397 -162583753 + L1MB3 LINE L1 3164 3302 -3080 2267 77 0 7 chr5 37046397 37046697 -162583453 + AluY SINE Alu 1 298 -13 2931 275 112 16 chr5 37046697 37048245 -162581905 + L1MB3 LINE L1 3302 5033 -1349 243 0 0 0 chr5 37048245 37048272 -162581878 + (TG)n Simple_repeat Simple_repeat 2 28 0 241 83 0 0 chr5 37048293 37048341 -162581809 - LTR66 LTR ERVL -169 441 394 26 0 0 0 chr5 37048470 37048496 -162581654 + AT_rich Low_complexity Low_complexity 1 26 0 3646 197 13 23 chr5 37048781 37049710 -162580440 + L1MB3 LINE L1 5325 6247 -172 22 0 0 0 chr5 37050451 37050473 -162579677 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr5 37050634 37050658 -162579492 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2606 91 3 5 chr5 37050933 37051305 -162578845 + L1PA8 LINE L1 5800 6170 -2 24 0 0 0 chr5 37052851 37052875 -162577275 + AT_rich Low_complexity Low_complexity 1 24 0 2166 115 0 3 chr5 37052920 37053232 -162576918 - AluSx SINE Alu -1 311 1 246 305 92 28 chr5 37054248 37054389 -162575761 + LTR67 LTR ERVL 400 549 -8 223 280 0 0 chr5 37056140 37056190 -162573960 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 332 240 37 0 chr5 37056191 37056300 -162573850 - L1MC4 LINE L1 -1139 6646 6570 186 189 0 0 chr5 37056302 37056339 -162573811 + (TA)n Simple_repeat Simple_repeat 1 37 0 247 154 5 0 chr5 37058087 37058162 -162571988 - LTR66 LTR ERVL 0 520 394 305 214 0 14 chr5 37058162 37058232 -162571918 - L1MCa LINE L1 -4363 2063 1995 25 51 0 0 chr5 37058301 37058340 -162571810 + AT_rich Low_complexity Low_complexity 1 39 0 369 0 0 0 chr5 37058340 37058381 -162571769 + (CA)n Simple_repeat Simple_repeat 2 42 0 1007 193 115 81 chr5 37058381 37058520 -162571630 - MLT2C1 LTR ERVL -65 332 199 432 0 0 0 chr5 37058520 37058568 -162571582 + (TG)n Simple_repeat Simple_repeat 1 48 0 1007 193 115 81 chr5 37058568 37058749 -162571401 - MLT2C1 LTR ERVL -198 199 1 1053 196 121 12 chr5 37059005 37059245 -162570905 - MLT1C LTR MaLR -201 266 1 1722 100 34 4 chr5 37059313 37059582 -162570568 - L1PA10 LINE L1 -5 6163 5887 273 154 0 19 chr5 37059993 37060045 -162570105 + LTR22 LTR ERVK 3 53 -527 * 1518 206 48 6 chr5 37060023 37060358 -162569792 + LTR22 LTR ERVK 161 509 -71 237 297 11 11 chr5 37060609 37060700 -162569450 + GA-rich Low_complexity Low_complexity 2 92 0 617 291 74 14 chr5 37060878 37061525 -162568625 + L1ME3 LINE L1 5440 6161 -1 361 239 132 129 chr5 37061559 37061954 -162568196 + MER20B DNA MER1_type 315 713 -70 2236 147 23 52 chr5 37061954 37062395 -162567755 + MSTA LTR MaLR 1 428 0 361 239 132 129 chr5 37062395 37062463 -162567687 + MER20B DNA MER1_type 713 779 -4 302 342 83 19 chr5 37062478 37062744 -162567406 - L2 LINE L2 -65 3248 2966 189 0 0 0 chr5 37064658 37064679 -162565471 + (A)n Simple_repeat Simple_repeat 1 21 0 369 248 23 54 chr5 37064855 37064984 -162565166 - L2 LINE L2 -12 3301 3177 863 192 26 0 chr5 37064999 37065192 -162564958 + L1PBa LINE L1 3 200 -6663 9114 127 16 3 chr5 37065194 37067284 -162562866 + L1PBa LINE L1 636 2940 -3923 403 176 0 0 chr5 37067284 37067358 -162562792 + AluJ/FRAM SINE Alu 229 302 0 259 341 55 0 chr5 37067431 37067522 -162562628 + HAL1 LINE L1 588 683 -1824 800 239 101 5 chr5 37067523 37067732 -162562418 + MLT1E2 LTR MaLR 5 233 -393 26 0 0 0 chr5 37067732 37067758 -162562392 + AT_rich Low_complexity Low_complexity 1 26 0 395 365 60 25 chr5 37067805 37068158 -162561992 + HAL1 LINE L1 743 1107 -1400 323 274 48 8 chr5 37068221 37068345 -162561805 + HAL1 LINE L1 1260 1388 -1119 1001 242 239 46 chr5 37068430 37068920 -162561230 + MLT1E1 LTR MaLR 5 612 -42 2328 81 3 0 chr5 37068920 37069218 -162560932 - AluY SINE Alu -12 299 1 1001 242 239 46 chr5 37069218 37069272 -162560878 + MLT1E1 LTR MaLR 612 654 0 265 267 0 13 chr5 37069860 37069935 -162560215 + MLT1I LTR MaLR 118 191 -218 254 240 40 13 chr5 37070087 37070162 -162559988 + MLT1I LTR MaLR 320 396 -13 1439 239 48 50 chr5 37070432 37070930 -162559220 + MLT1D LTR MaLR 1 497 -8 998 237 42 55 chr5 37070990 37071302 -162558848 + MLT1E2 LTR MaLR 311 618 -8 283 207 167 66 chr5 37071335 37071533 -162558617 - HAL1 LINE L1 -292 2215 1998 360 339 89 26 chr5 37071741 37072045 -162558105 - HAL1 LINE L1 -811 1696 1374 646 330 109 50 chr5 37072296 37072754 -162557396 + L2 LINE L2 2829 3313 0 305 355 93 17 chr5 37072769 37072941 -162557209 - HAL1 LINE L1 -1680 827 643 21 36 0 0 chr5 37073729 37073757 -162556393 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 37075089 37075121 -162555029 + AT_rich Low_complexity Low_complexity 1 32 0 225 254 34 17 chr5 37075330 37075389 -162554761 + MLT1E LTR MaLR 3 62 -562 993 274 69 29 chr5 37075472 37075851 -162554299 + MLT1E LTR MaLR 200 593 0 3606 93 309 0 chr5 37076463 37077094 -162553056 - LTR12 LTR ERV1 0 826 1 1721 155 17 0 chr5 37077547 37077844 -162552306 - AluSq SINE Alu -11 302 1 1012 206 14 37 chr5 37078555 37078757 -162551393 + MER58A DNA MER1_type 12 210 -2210 2422 58 0 0 chr5 37078757 37079052 -162551098 + AluY SINE Alu 1 295 -16 1012 206 14 37 chr5 37079052 37079067 -162551083 + MER58A DNA MER1_type 210 224 0 23 0 0 0 chr5 37079541 37079564 -162550586 + AT_rich Low_complexity Low_complexity 1 23 0 242 273 122 50 chr5 37079799 37079938 -162550212 - LTR1B LTR ERV1 -74 752 604 * 1991 102 14 7 chr5 37079935 37080228 -162549922 + THE1B LTR MaLR 70 364 0 319 225 8 100 chr5 37080228 37080348 -162549802 + MER67C LTR ERV1 295 403 -307 2366 41 41 3 chr5 37080612 37080904 -162549246 + AluY SINE Alu 1 303 -8 25 51 0 0 chr5 37081209 37081248 -162548902 + AT_rich Low_complexity Low_complexity 1 39 0 1877 280 63 3 chr5 37081499 37082088 -162548062 - MLT1E2 LTR MaLR 0 626 3 27 29 0 0 chr5 37083055 37083089 -162547061 + AT_rich Low_complexity Low_complexity 1 34 0 232 226 38 0 chr5 37084827 37084880 -162545270 - L1MD3 LINE L1 -1328 6667 6613 230 303 11 0 chr5 37084854 37084943 -162545207 - L1MC4 LINE L1 -1339 6703 6614 * 216 0 0 0 chr5 37084926 37084950 -162545200 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 869 237 14 3 chr5 37085598 37085872 -162544278 - MER74C LTR ERVL -20 440 88 540 293 142 13 chr5 37085868 37086107 -162544043 + MLT2B1 LTR ERVL 157 426 -94 * 4701 30 4 0 chr5 37086264 37086854 -162543296 + L1PA3 LINE L1 5585 6176 0 25 65 0 0 chr5 37087301 37087347 -162542803 + AT_rich Low_complexity Low_complexity 1 46 0 279 252 34 50 chr5 37088146 37088265 -162541885 + MLT1J1 LTR MaLR 286 402 -44 1503 181 10 45 chr5 37088563 37088877 -162541273 + AluJb SINE Alu 1 303 -9 389 274 27 41 chr5 37088989 37089135 -162541015 - MIR SINE MIR -11 251 108 1547 193 94 23 chr5 37089135 37089487 -162540663 + MLT1B LTR MaLR 1 377 -13 199 246 0 18 chr5 37089523 37089580 -162540570 - MIR SINE MIR -150 112 57 2196 137 0 0 chr5 37090363 37090670 -162539480 + AluSc SINE Alu 1 307 -2 2362 141 6 3 chr5 37091265 37091628 -162538522 - THE1B LTR MaLR 0 364 1 9793 124 49 5 chr5 37091629 37093115 -162537035 - THE1B-int LTR MaLR -28 1552 1 2436 125 5 16 chr5 37093115 37093483 -162536667 - THE1B LTR MaLR 0 364 1 522 299 28 6 chr5 37093778 37093955 -162536195 + MER20 DNA MER1_type 4 184 -35 435 198 8 16 chr5 37094945 37095071 -162535079 + GA-rich Low_complexity Low_complexity 3 127 0 195 186 0 0 chr5 37095225 37095268 -162534882 + GA-rich Low_complexity Low_complexity 2 44 0 2068 70 21 3 chr5 37095306 37095590 -162534560 - L1PA7 LINE L1 -3 6151 5863 2630 257 187 40 chr5 37096615 37097826 -162532324 + L1M2b LINE L1 1 1388 -5821 238 356 58 0 chr5 37098524 37098628 -162531522 + L1M2b LINE L1 1216 1325 -5884 7758 219 63 22 chr5 37098628 37101304 -162528846 + L1M2 LINE L1 787 3574 -3274 9953 199 73 24 chr5 37201312 37202184 -162427966 + L1MC1 LINE L1 50 878 -5548 419 122 61 0 chr5 37202184 37202266 -162427884 - L1PA13 LINE L1 -1 6162 6076 9953 199 73 24 chr5 37202266 37203971 -162426179 + L1MC1 LINE L1 878 2772 -3654 242 129 24 5 chr5 37203979 37204031 -162426119 - THE1A LTR MaLR -259 96 45 1179 247 11 39 chr5 37204072 37204432 -162425718 + L1MC1 LINE L1 4796 5145 -1281 1783 223 49 22 chr5 37204443 37204502 -162425648 - MSTB1 LTR MaLR -13 419 363 1916 154 36 36 chr5 37204502 37204866 -162425284 - THE1B LTR MaLR 0 364 1 1783 223 49 22 chr5 37204866 37205214 -162424936 - MSTB1 LTR MaLR -69 363 1 4542 189 64 36 chr5 37205223 37205999 -162424151 + L1MC1 LINE L1 5151 5986 -627 1846 191 57 24 chr5 37205999 37206417 -162423733 - MSTB1 LTR MaLR 0 432 1 4542 189 64 36 chr5 37206417 37207064 -162423086 + L1MC1 LINE L1 5986 6613 0 448 283 194 35 chr5 37207773 37208140 -162422010 - L2 LINE L2 0 3313 2889 26 30 0 0 chr5 37208221 37208254 -162421896 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 37209002 37209025 -162421125 + AT_rich Low_complexity Low_complexity 1 23 0 1421 128 0 0 chr5 37210534 37210745 -162419405 + AluSp SINE Alu 101 311 -2 23 86 0 0 chr5 37210887 37210945 -162419205 + AT_rich Low_complexity Low_complexity 1 58 0 958 65 16 0 chr5 37213103 37213227 -162416923 - AluSg/x SINE Alu -15 295 170 226 291 23 23 chr5 37213734 37213820 -162416330 - MLT1J2 LTR MaLR -22 428 343 225 0 0 0 chr5 37214674 37214699 -162415451 + (T)n Simple_repeat Simple_repeat 1 25 0 2257 195 71 0 chr5 37214731 37215151 -162414999 + MER70A LTR ERVL 22 471 -1 441 282 53 24 chr5 37215923 37216093 -162414057 - MLT1J2 LTR MaLR -237 213 39 261 111 0 0 chr5 37217867 37217903 -162412247 - MLT2B1 LTR ERVL 0 520 485 2341 159 18 30 chr5 37218015 37218454 -162411696 + Tigger2a DNA MER2_type 1 434 0 1252 238 141 22 chr5 37218454 37218706 -162411444 - MLT2B1 LTR ERVL -67 453 232 2285 102 0 0 chr5 37218706 37219001 -162411149 + AluSq SINE Alu 3 297 -16 1252 238 141 22 chr5 37219001 37219151 -162410999 - MLT2B1 LTR ERVL -288 232 3 1048 248 128 19 chr5 37219209 37219784 -162410366 - MER45B DNA AcHobo -10 1030 310 2630 195 7 36 chr5 37219784 37220333 -162409817 + Tigger1 DNA MER2_type 1 533 -1885 1990 155 28 11 chr5 37220333 37220688 -162409462 + Tigger1 DNA MER2_type 755 1115 -1303 11793 213 41 19 chr5 37220698 37224412 -162405738 + L1MC/D LINE L1 2245 5877 -1065 2227 82 3 0 chr5 37224412 37224704 -162405446 + AluY SINE Alu 1 293 -18 11793 213 41 19 chr5 37224704 37224815 -162405335 + L1MC/D LINE L1 5877 5984 -958 1851 201 12 12 chr5 37224815 37224851 -162405299 + L1MA5 LINE L1 5894 5929 -371 264 91 0 0 chr5 37224851 37224895 -162405255 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1851 201 12 12 chr5 37224895 37225255 -162404895 + L1MA5 LINE L1 5928 6300 0 11793 213 41 19 chr5 37225255 37225277 -162404873 + L1MC/D LINE L1 5984 6199 -743 21 36 0 0 chr5 37225835 37225863 -162404287 + AT_rich Low_complexity Low_complexity 1 28 0 1992 100 21 3 chr5 37226608 37226898 -162403252 + AluSg SINE Alu 1 295 -15 1603 187 101 61 chr5 37227877 37228353 -162401797 - MER50 LTR ERV1 0 734 240 238 157 20 39 chr5 37228463 37228514 -162401636 - MER50 LTR ERV1 -675 59 10 1570 158 55 68 chr5 37229043 37229423 -162400727 + THE1C LTR MaLR 1 375 0 27 49 0 0 chr5 37230725 37230766 -162399384 + AT_rich Low_complexity Low_complexity 1 41 0 2197 77 7 13 chr5 37231733 37232031 -162398119 - AluY SINE Alu -15 296 1 2155 187 9 18 chr5 37232071 37232509 -162397641 + Tigger2a DNA MER2_type 1 434 0 474 227 42 155 chr5 37232623 37233024 -162397126 - L1MD3 LINE L1 -10 7985 7630 1983 125 4 4 chr5 37233943 37234244 -162395906 + AluSc SINE Alu 1 301 0 23 0 0 0 chr5 37234345 37234368 -162395782 + AT_rich Low_complexity Low_complexity 1 23 0 315 294 55 18 chr5 37234566 37234729 -162395421 - L1ME1 LINE L1 -15 6151 5983 836 227 0 0 chr5 37234773 37234936 -162395214 + MLT1A1 LTR MaLR 1 163 -202 1408 212 90 113 chr5 37234938 37235505 -162394645 + MLT2B3 LTR ERVL 1 554 0 1188 177 10 5 chr5 37235505 37235707 -162394443 + MLT1A1 LTR MaLR 161 363 -2 625 294 50 23 chr5 37235707 37236262 -162393888 - L1ME1 LINE L1 -224 5942 5345 376 282 86 6 chr5 37236300 37236474 -162393676 - L1ME1 LINE L1 -861 5285 5098 316 181 42 14 chr5 37236491 37236563 -162393587 + MLT1B LTR MaLR 308 381 -9 29 60 0 0 chr5 37236716 37236766 -162393384 + AT_rich Low_complexity Low_complexity 1 50 0 1581 196 92 11 chr5 37237258 37237605 -162392545 + THE1C LTR MaLR 1 375 0 1761 218 3 0 chr5 37238134 37238455 -162391695 - MLT2B2 LTR ERVL -193 322 1 617 258 81 25 chr5 37238478 37238761 -162391389 + L1ME1 LINE L1 5765 6063 -103 24 32 0 0 chr5 37239932 37239963 -162390187 + AT_rich Low_complexity Low_complexity 1 31 0 229 271 71 0 chr5 37242006 37242091 -162388059 + L1ME LINE L1 5690 5780 -341 23 54 0 0 chr5 37242155 37242192 -162387958 + AT_rich Low_complexity Low_complexity 1 37 0 231 61 0 0 chr5 37242241 37242274 -162387876 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 618 131 0 10 chr5 37242285 37242384 -162387766 + MSTA LTR MaLR 1 98 -328 2285 79 41 0 chr5 37242396 37242688 -162387462 - AluY SINE Alu -2 309 6 2181 143 20 17 chr5 37242696 37243054 -162387096 - THE1B LTR MaLR -5 359 1 5423 106 1 5 chr5 37243054 37243791 -162386359 - THE1B-int LTR MaLR 0 1580 847 4682 92 1 44 chr5 37243791 37244489 -162385661 - THE1B-int LTR MaLR -910 670 3 2013 141 33 28 chr5 37244491 37244853 -162385297 - THE1B LTR MaLR 0 364 1 1554 195 14 17 chr5 37244870 37245167 -162384983 + MSTA LTR MaLR 133 428 0 8364 179 33 36 chr5 37245175 37245530 -162384620 + MSTA-int LTR MaLR 10 365 -1286 2330 86 3 3 chr5 37245530 37245822 -162384328 - AluY SINE Alu -19 292 1 8364 179 33 36 chr5 37245822 37247113 -162383037 + MSTA-int LTR MaLR 365 1651 0 2121 173 58 15 chr5 37247113 37247523 -162382627 + MSTA LTR MaLR 1 428 0 204 163 0 0 chr5 37247564 37247607 -162382543 + (CA)n Simple_repeat Simple_repeat 1 43 0 1536 256 66 41 chr5 37247640 37247947 -162382203 + L1ME2 LINE L1 5298 5596 -568 1983 218 31 12 chr5 37247947 37248370 -162381780 + MSTB1 LTR MaLR 1 431 -1 1536 256 66 41 chr5 37248370 37248897 -162381253 + L1ME2 LINE L1 5596 6153 -11 276 233 17 0 chr5 37250820 37250880 -162379270 - MIR SINE MIR -135 127 67 2012 101 0 7 chr5 37251786 37252134 -162378016 - AluSc SINE Alu 0 352 7 1620 110 0 0 chr5 37252626 37252844 -162377306 - AluSq SINE Alu -95 218 1 2334 171 20 22 chr5 37253054 37253551 -162376599 - L1MB3 LINE L1 -3 6180 5685 22 35 0 0 chr5 37254010 37254039 -162376111 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr5 37255427 37255467 -162374683 + AT_rich Low_complexity Low_complexity 1 40 0 1938 143 48 28 chr5 37255809 37256166 -162373984 - THE1B LTR MaLR 0 364 1 10344 121 31 5 chr5 37256166 37257700 -162372450 - THE1C-int LTR MaLR 0 1580 6 2104 127 38 24 chr5 37257705 37258075 -162372075 - THE1C LTR MaLR 0 375 1 251 383 86 0 chr5 37258863 37259025 -162371125 + L2 LINE L2 1846 2021 -1293 321 315 0 22 chr5 37259749 37259841 -162370309 - L2 LINE L2 -33 3280 3191 2531 46 3 3 chr5 37260469 37260776 -162369374 - AluY SINE Alu -4 307 1 358 200 3 16 chr5 37261138 37261221 -162368929 + MER21A LTR ERV1 1 83 -780 453 197 16 88 chr5 37261322 37261506 -162368644 + MER21A LTR ERV1 74 310 -397 1218 169 35 28 chr5 37261511 37261766 -162368384 + MLT2A2 LTR ERVL 1 257 -196 1823 126 11 8 chr5 37261786 37262047 -162368103 - AluSx SINE Alu -45 267 6 756 244 122 13 chr5 37262078 37262307 -162367843 + MLT2B3 LTR ERVL 255 508 -46 2852 209 13 107 chr5 37262380 37263203 -162366947 + MER21A LTR ERV1 159 904 -27 2676 109 41 5 chr5 37263237 37263649 -162366501 + MSTA LTR MaLR 1 427 -1 210 324 29 37 chr5 37264681 37264817 -162365333 - MER5A DNA MER1_type -23 166 32 4401 130 3 31 chr5 37264870 37265517 -162364633 - L1PA12 LINE L1 0 6168 5573 1896 159 23 0 chr5 37265517 37265643 -162364507 + AluSx SINE Alu 1 123 -189 450 0 0 0 chr5 37265643 37265693 -162364457 + (CA)n Simple_repeat Simple_repeat 2 51 0 1896 159 23 0 chr5 37265693 37265868 -162364282 + AluSx SINE Alu 123 309 -3 4401 130 3 31 chr5 37265868 37266071 -162364079 - L1PA12 LINE L1 -595 5573 5366 2292 184 0 0 chr5 37266076 37266495 -162363655 + L1P LINE L1 4462 4880 -1266 1694 183 7 90 chr5 37266782 37267140 -162363010 - MLT2C1 LTR ERVL -1 396 79 1939 149 0 3 chr5 37267140 37267435 -162362715 - AluSq SINE Alu -19 294 1 1694 183 7 90 chr5 37267435 37267508 -162362642 - MLT2C1 LTR ERVL -318 79 1 868 148 14 32 chr5 37268184 37268532 -162361618 + ERVL-D LTR ERVL 5270 5757 0 1776 174 21 72 chr5 37268532 37268963 -162361187 + MLT2D LTR ERVL 1 409 -5 23 0 0 0 chr5 37270957 37270980 -162359170 + AT_rich Low_complexity Low_complexity 1 23 0 1301 269 111 39 chr5 37271552 37272457 -162357693 - L1ME3 LINE L1 -55 6107 5134 1740 305 72 4 chr5 37272485 37273223 -162356927 - L1ME1 LINE L1 -5 6161 5374 1991 150 46 9 chr5 37323461 37323808 -162306342 - THE1-int LTR MaLR -259 1321 962 1493 224 57 5 chr5 37324244 37324627 -162305523 + MLT1C LTR MaLR 65 467 0 405 227 93 47 chr5 37324627 37324776 -162305374 - MARNA DNA Mariner -118 468 313 2466 111 6 0 chr5 37324789 37325142 -162305008 - THE1A LTR MaLR 0 355 1 2138 131 0 3 chr5 37325177 37325491 -162304659 - AluSq SINE Alu 0 313 1 361 345 47 0 chr5 37325546 37325717 -162304433 - MIR SINE MIR -6 256 78 1849 278 76 34 chr5 37326909 37327782 -162302368 + L1ME3A LINE L1 5257 6165 -5 2164 24 0 0 chr5 37328386 37328640 -162301510 + L1PA2 LINE L1 5902 6155 0 201 111 0 56 chr5 37328864 37328900 -162301250 + (TAG)n Simple_repeat Simple_repeat 1 34 0 492 268 166 29 chr5 37328968 37329282 -162300868 + L1MCc LINE L1 1162 1518 -4905 331 287 68 40 chr5 37329615 37330012 -162300138 + L1MCc LINE L1 1961 2368 -4754 24 67 0 0 chr5 37330144 37330189 -162299961 + AT_rich Low_complexity Low_complexity 1 45 0 316 153 34 0 chr5 37330994 37331053 -162299097 - L1M4 LINE L1 -3124 3022 2962 1470 98 5 0 chr5 37331536 37331751 -162298399 - L1P LINE L1 -3368 2778 2563 928 208 84 60 chr5 37332083 37332367 -162297783 - MLT1B LTR MaLR -89 301 11 745 275 66 25 chr5 37332603 37333069 -162297081 + L1MCc LINE L1 2839 3288 -3653 1750 309 77 17 chr5 37333070 37334401 -162295749 + L1MCc LINE L1 3868 5278 -1663 791 241 19 11 chr5 37334410 37334726 -162295424 + MLT1A1 LTR MaLR 1 365 0 811 311 102 33 chr5 37334726 37335325 -162294825 + L1MCc LINE L1 5286 5925 -1016 275 175 65 21 chr5 37335428 37335523 -162294627 + L1ME LINE L1 5665 5763 -399 2748 133 28 7 chr5 37335525 37335921 -162294229 + MLT2A1 LTR ERVL 1 408 -36 315 0 0 0 chr5 37335921 37335956 -162294194 + (CA)n Simple_repeat Simple_repeat 2 36 0 2748 133 28 7 chr5 37335956 37335994 -162294156 + MLT2A1 LTR ERVL 408 444 0 28705 82 9 4 chr5 37336006 37340029 -162290121 + HERVL-A1 LTR ERVL 2 4044 -1610 1690 209 31 38 chr5 37340254 37340671 -162289479 - MER47B DNA MER2_type -4 414 1 195 299 45 15 chr5 37340833 37340900 -162289250 - L2 LINE L2 0 3313 3245 1982 238 51 9 chr5 37341184 37341637 -162288513 + MER70A LTR ERVL 1 472 0 344 286 77 0 chr5 37341735 37341826 -162288324 - MER58A DNA MER1_type -5 102 5 199 288 12 12 chr5 37341852 37341932 -162288218 - MER5C DNA MER1_type -46 278 199 1428 97 15 0 chr5 37342332 37342538 -162287612 - L1PA7 LINE L1 -2 6152 5944 1536 152 17 0 chr5 37342667 37342904 -162287246 + AluSg SINE Alu 54 294 -16 21 0 0 0 chr5 37343159 37343180 -162286970 + AT_rich Low_complexity Low_complexity 1 21 0 342 263 93 8 chr5 37343717 37343835 -162286315 + L2 LINE L2 3169 3296 -17 214 296 63 42 chr5 37344693 37344790 -162285360 + L2 LINE L2 3164 3266 -47 2104 122 3 7 chr5 37344790 37345094 -162285056 + AluSq SINE Alu 1 303 -10 214 296 63 42 chr5 37345094 37345138 -162285012 + L2 LINE L2 3266 3308 -5 1942 141 11 0 chr5 37345182 37345479 -162284671 + AluSx SINE Alu 3 302 0 305 295 36 27 chr5 37345798 37345910 -162284240 - MIR SINE MIR -63 145 33 922 299 103 19 chr5 37345914 37346544 -162283606 + L2 LINE L2 2523 3223 -90 717 214 0 8 chr5 37346613 37346744 -162283406 - FLAM_A SINE Alu -3 130 1 451 240 99 24 chr5 37346975 37347251 -162282899 + L1MC/D LINE L1 5545 5852 -299 2443 174 41 30 chr5 37347327 37348053 -162282097 + L1M4 LINE L1 4927 5666 -508 1596 167 36 14 chr5 37348053 37348353 -162281797 - AluJb SINE Alu 0 306 1 2443 174 41 30 chr5 37348353 37348503 -162281647 + L1M4 LINE L1 5666 5813 -361 18886 139 19 89 chr5 37348865 37352915 -162277235 - L1P LINE L1 -2366 3780 12 22 35 0 0 chr5 37354298 37354327 -162275823 + AT_rich Low_complexity Low_complexity 1 29 0 32 43 0 0 chr5 37354566 37354612 -162275538 + AT_rich Low_complexity Low_complexity 1 46 0 780 22 0 0 chr5 37354694 37354786 -162275364 + L1PA7 LINE L1 6060 6151 -3 25 0 0 0 chr5 37355412 37355437 -162274713 + AT_rich Low_complexity Low_complexity 1 25 0 239 212 76 15 chr5 37357075 37357141 -162273009 + L1M4 LINE L1 5739 5808 -366 2631 205 68 31 chr5 37357357 37357997 -162272153 + L1MB8 LINE L1 5431 6101 -77 1450 175 33 75 chr5 37357997 37358357 -162271793 + MER7A DNA MER2_type 4 346 0 2631 205 68 31 chr5 37358357 37358422 -162271728 + L1MB8 LINE L1 6101 6162 -16 230 140 0 20 chr5 37358431 37358481 -162271669 - LTR66 LTR ERVL -172 438 390 23 33 0 0 chr5 37359176 37359206 -162270944 + AT_rich Low_complexity Low_complexity 1 30 0 414 69 0 0 chr5 37359732 37359790 -162270360 + (GA)n Simple_repeat Simple_repeat 2 59 0 11430 150 104 32 chr5 37359790 37359851 -162270299 - Tigger1 DNA MER2_type -1 2417 2362 2653 52 0 0 chr5 37359851 37360159 -162269991 - AluY SINE Alu -2 309 2 11430 150 104 32 chr5 37360159 37360187 -162269963 - Tigger1 DNA MER2_type -56 2362 2337 1839 181 29 54 chr5 37360187 37360630 -162269520 + MSTB1 LTR MaLR 1 432 0 11430 150 104 32 chr5 37360630 37361420 -162268730 - Tigger1 DNA MER2_type -81 2337 1605 2017 117 14 3 chr5 37361420 37361703 -162268447 + AluSx SINE Alu 1 286 -26 11430 150 104 32 chr5 37361703 37363075 -162267075 - Tigger1 DNA MER2_type -813 1605 2 1630 204 20 52 chr5 37363247 37363650 -162266500 + MLT1B LTR MaLR 1 390 0 4471 216 19 18 chr5 37364252 37364699 -162265451 - L1 LINE L1 -2095 4051 3606 297 0 0 0 chr5 37364699 37364732 -162265418 + (TG)n Simple_repeat Simple_repeat 2 34 0 4471 216 19 18 chr5 37364732 37365411 -162264739 - L1 LINE L1 -2540 3606 2924 2665 81 6 0 chr5 37365858 37366204 -162263946 - THE1A LTR MaLR -2 353 6 10590 116 14 10 chr5 37366209 37367782 -162262368 - THE1A-int LTR MaLR 0 1580 2 283 128 58 0 chr5 37368071 37368157 -162261993 + (TA)n Simple_repeat Simple_repeat 2 92 0 1464 178 96 37 chr5 37368986 37369340 -162260810 + THE1C LTR MaLR 1 375 0 7112 213 24 3 chr5 37369340 37370744 -162259406 + THE1C-int LTR MaLR 1 1433 -218 1885 139 14 3 chr5 37370744 37371032 -162259118 - MER50-int LTR ERV1 -6908 297 7 2170 153 49 8 chr5 37371032 37371399 -162258751 - MER50 LTR ERV1 -12 722 341 1499 164 143 0 chr5 37371404 37371684 -162258466 + L1PA16 LINE L1 5838 6157 -9 880 36 9 0 chr5 37371706 37371818 -162258332 - MLT2C2 LTR ERVL -351 113 1 293 213 83 102 chr5 37371992 37372100 -162258050 - L2 LINE L2 -12 3301 3196 634 259 117 13 chr5 37372703 37372942 -162257208 - LTR16B LTR ERVL -153 311 48 224 109 0 43 chr5 37373205 37373251 -162256899 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 3256 115 17 46 chr5 37373722 37374354 -162255796 - MER4B LTR ERV1 0 779 1 2607 85 90 8 chr5 37375259 37375646 -162254504 + MER4C LTR ERV1 47 465 0 1562 144 117 7 chr5 37375650 37375948 -162254202 + MER4C-int LTR ERV1 2 332 -6266 746 134 183 30 chr5 37375948 37376112 -162254038 - MER4C LTR ERV1 0 465 277 1347 310 66 98 chr5 37376128 37376567 -162253583 - MER4A LTR ERV1 -239 425 1 3194 144 57 48 chr5 37376757 37377787 -162252363 + MER4-int LTR ERV1 1756 2485 -4113 1149 188 57 71 chr5 37377163 37377241 -162252909 + LTR57-int LTR ERVL 988 1066 -4277 * 2238 121 3 0 chr5 37377241 37377548 -162252602 + AluSq SINE Alu 1 308 -5 1149 188 57 71 chr5 37377548 37377836 -162252314 + LTR57-int LTR ERVL 1066 1349 -3994 276 130 0 72 chr5 37377813 37377882 -162252268 + MER4-int LTR ERV1 1764 1827 -4931 * 547 104 42 21 chr5 37377882 37377978 -162252172 + MER4A LTR ERV1 1 98 -566 1698 135 37 39 chr5 37377978 37378319 -162251831 + MER4A LTR ERV1 261 664 0 2666 79 54 52 chr5 37378322 37378820 -162251330 + MER4A-int LTR ERV1 1 559 -6039 3840 141 21 44 chr5 37378829 37379774 -162250376 + MER4-int LTR ERV1 192 1170 -5588 4251 91 57 13 chr5 37379790 37380491 -162249659 + MER4-int LTR ERV1 1764 2495 -4103 1152 162 127 0 chr5 37380491 37380719 -162249431 - LTR8 LTR ERV1 -434 257 1 15546 111 61 37 chr5 37380719 37380911 -162249239 + MER4-int LTR ERV1 1862 2048 -4550 2346 96 0 0 chr5 37380911 37381203 -162248947 - AluSg SINE Alu -18 292 1 15546 111 61 37 chr5 37381203 37383137 -162247013 + MER4-int LTR ERV1 2048 3933 -2665 2238 79 10 14 chr5 37383137 37383428 -162246722 + AluY SINE Alu 5 294 -17 15546 111 61 37 chr5 37383428 37383750 -162246400 + MER4-int LTR ERV1 3933 4246 -2352 2149 118 0 0 chr5 37383750 37384038 -162246112 + AluSx SINE Alu 13 300 -12 15546 111 61 37 chr5 37384038 37384590 -162245560 + MER4-int LTR ERV1 4246 4783 -1815 7356 34 29 2 chr5 37384590 37385464 -162244686 - MER11D LTR ERVK 0 897 1 15546 111 61 37 chr5 37385464 37385639 -162244511 + MER4-int LTR ERV1 4783 6594 -4 464 128 29 69 chr5 37385649 37385751 -162244399 + MER4A LTR ERV1 1 98 -566 1754 144 17 25 chr5 37385751 37386099 -162244051 + MER4A LTR ERV1 261 664 0 1078 119 4 73 chr5 37386099 37386360 -162243790 + MER4E-int LTR ERV1 1824 2066 -4692 * 10239 154 28 31 chr5 37386359 37388179 -162241971 + MER4E-int LTR ERV1 4218 6012 -586 1471 202 14 14 chr5 37388179 37388471 -162241679 + AluJb SINE Alu 1 292 -20 10239 154 28 31 chr5 37388471 37389052 -162241098 + MER4E-int LTR ERV1 6012 6593 -5 2420 80 10 0 chr5 37389065 37389367 -162240783 + AluY SINE Alu 1 305 -6 1579 74 30 89 chr5 37389378 37389647 -162240503 + MER4C LTR ERV1 1 253 -212 1947 143 76 25 chr5 37389648 37390005 -162240145 - THE1C LTR MaLR 0 375 1 4316 194 7 36 chr5 37390009 37390980 -162239170 - THE1-int LTR MaLR -4 1731 711 1897 180 22 23 chr5 37390980 37391373 -162238777 - MLT2A2 LTR ERVL -144 309 1 611 263 26 6 chr5 37391389 37391545 -162238605 + MER69B DNA AcHobo 514 672 -554 2254 188 39 11 chr5 37391545 37391986 -162238164 + MER4E LTR ERV1 1 453 -326 198 0 0 0 chr5 37391986 37392008 -162238142 + (TTA)n Simple_repeat Simple_repeat 3 24 0 38910 88 6 9 chr5 37392008 37398157 -162231993 - L1PA6 LINE L1 -18 6136 11 2023 119 9 47 chr5 37398165 37398508 -162231642 + MER4E LTR ERV1 436 765 -14 2109 148 0 0 chr5 37398508 37398805 -162231345 - AluSx SINE Alu -15 297 1 1741 225 28 33 chr5 37398850 37399308 -162230842 + MLT1C LTR MaLR 10 465 -2 1614 211 51 73 chr5 37399308 37399639 -162230511 + MER69B DNA AcHobo 682 1019 -1507 1860 181 0 0 chr5 37399639 37399942 -162230208 + AluJb SINE Alu 2 304 -8 1614 211 51 73 chr5 37399942 37399991 -162230159 + MER69B DNA AcHobo 1019 1068 -1458 1754 183 18 50 chr5 37399991 37400374 -162229776 - MER93b LTR ERV1 -2 371 1 1614 211 51 73 chr5 37400374 37400388 -162229762 + MER69B DNA AcHobo 1068 1081 -1445 1769 206 90 38 chr5 37400388 37400761 -162229389 + MLT1D LTR MaLR 1 406 -99 2030 122 3 16 chr5 37400761 37401065 -162229085 + AluSx SINE Alu 1 300 -12 1769 206 90 38 chr5 37401065 37401171 -162228979 + MLT1D LTR MaLR 406 505 0 1614 211 51 73 chr5 37401171 37401321 -162228829 + MER69B DNA AcHobo 1081 1216 -10 349 163 0 0 chr5 37401769 37401818 -162228332 + AluSq SINE Alu 9 57 -246 2259 88 0 55 chr5 37401819 37402147 -162228003 + AluY SINE Alu 2 311 0 1658 116 0 29 chr5 37402150 37402391 -162227759 + AluSq SINE Alu 44 277 -36 832 58 33 0 chr5 37402396 37402517 -162227633 + (GAAA)n Simple_repeat Simple_repeat 3 127 0 2277 68 0 0 chr5 37403621 37403925 -162226225 + AluY SINE Alu 1 304 0 1045 142 6 11 chr5 37403974 37404150 -162226000 + AluJb SINE Alu 122 296 -16 1373 185 133 24 chr5 37404408 37404738 -162225412 + MER93b LTR ERV1 6 371 -2 198 71 0 0 chr5 37405012 37405040 -162225110 + (TA)n Simple_repeat Simple_repeat 2 29 0 7044 70 11 2 chr5 37405040 37406632 -162223518 - L1PA7 LINE L1 -3 6151 4548 1260 54 0 0 chr5 37406632 37406780 -162223370 - AluY SINE Alu -12 299 152 27401 114 9 71 chr5 37406780 37411637 -162218513 - L1PA7 LINE L1 -1593 4553 1 2081 124 3 0 chr5 37411665 37411955 -162218195 - AluSx SINE Alu -21 291 1 269 264 100 55 chr5 37411958 37412068 -162218082 - L1MC/D LINE L1 -2124 5684 5570 304 330 29 0 chr5 37412479 37412582 -162217568 - MIR SINE MIR -135 127 22 337 188 109 59 chr5 37412589 37412617 -162217533 - MIR SINE MIR 0 262 237 1583 172 89 56 chr5 37412617 37412954 -162217196 - MER7A DNA MER2_type 0 346 1 337 188 109 59 chr5 37412954 37413026 -162217124 - MIR SINE MIR -25 237 157 876 235 79 20 chr5 37413026 37413311 -162216839 - LTR16C LTR ERVL -2 481 193 470 244 87 8 chr5 37413484 37413611 -162216539 - MIR SINE MIR -122 140 4 259 217 121 0 chr5 37413790 37413873 -162216277 - MER5A DNA MER1_type 0 189 97 484 133 10 20 chr5 37414315 37414413 -162215737 + CT-rich Low_complexity Low_complexity 3 99 0 641 186 0 0 chr5 37414416 37414518 -162215632 - FLAM_A SINE Alu -20 122 21 298 222 42 0 chr5 37414542 37414614 -162215536 - MER5A DNA MER1_type -80 109 35 292 196 98 54 chr5 37415210 37415302 -162214848 - L2 LINE L2 -7 3306 3211 327 150 0 0 chr5 37415326 37415386 -162214764 + (TG)n Simple_repeat Simple_repeat 1 60 0 1149 249 52 64 chr5 37416231 37416765 -162213385 + PABL_B LTR ERV1 1 667 0 2324 97 0 13 chr5 37417193 37417493 -162212657 + AluSx SINE Alu 1 296 -16 2827 102 11 5 chr5 37417985 37418358 -162211792 - THE1C LTR MaLR 0 375 1 209 259 0 0 chr5 37418497 37418551 -162211599 - MIR SINE MIR -105 157 104 437 266 54 58 chr5 37418742 37418976 -162211174 - L1M4 LINE L1 -1300 4846 4612 2218 106 17 0 chr5 37418976 37419277 -162210873 + AluSp SINE Alu 1 306 -7 437 266 54 58 chr5 37419277 37419301 -162210849 - L1M4 LINE L1 -1534 4612 4589 1844 151 3 19 chr5 37419334 37419685 -162210465 - MER4A LTR ERV1 0 664 261 578 141 10 20 chr5 37419685 37419784 -162210366 - MER4A LTR ERV1 -566 98 1 1820 102 16 12 chr5 37419823 37420077 -162210073 + L1PA10 LINE L1 5911 6165 -3 16362 107 55 21 chr5 37420094 37420271 -162209879 - MER4A-int LTR ERV1 -18 6580 6410 2109 120 0 20 chr5 37420271 37420593 -162209557 + AluSq SINE Alu 1 313 0 16362 107 55 21 chr5 37420593 37423069 -162207081 - MER4A-int LTR ERV1 -188 6410 3837 4483 121 81 24 chr5 37423068 37423960 -162206190 - MER4A-int LTR ERV1 -2917 3681 2739 * 1254 183 70 4 chr5 37423962 37424203 -162205947 + LTR8 LTR ERV1 1 257 -434 740 118 16 24 chr5 37424203 37424330 -162205820 - MER4A-int LTR ERV1 -4103 2495 2370 6720 84 52 0 chr5 37424330 37425183 -162204967 - MER11D LTR ERVK 0 897 1 39966 42 5 3 chr5 37425183 37427102 -162203048 - HERVK11D LTR ERVK 0 7752 5838 2402 76 7 0 chr5 37427102 37427405 -162202745 + AluY SINE Alu 1 305 -6 39966 42 5 3 chr5 37427405 37431020 -162199130 - HERVK11D LTR ERVK -1914 5838 1 7168 88 10 1 chr5 37431020 37431909 -162198241 - MER11D LTR ERVK 0 897 1 341 118 0 0 chr5 37431909 37431960 -162198190 - MER4A-int LTR ERV1 -3487 1528 1478 * 1243 144 35 0 chr5 37431954 37432156 -162197994 - MER4A-int LTR ERV1 -4024 991 783 11343 136 21 22 chr5 37432182 37435157 -162194993 + L1P3 LINE L1 10 2998 -3463 11195 97 15 15 chr5 37435257 37435419 -162194731 + L1P3 LINE L1 3518 3679 -2782 180 0 0 0 chr5 37435419 37435439 -162194711 + (CA)n Simple_repeat Simple_repeat 2 21 0 11195 97 15 15 chr5 37435439 37436924 -162193226 + L1P3 LINE L1 3679 5164 -1297 1214 199 91 62 chr5 37436899 37437251 -162192899 + L1MD3 LINE L1 7904 8265 -45 * 2182 87 21 3 chr5 37437275 37437561 -162192589 - AluSx SINE Alu -21 291 1 1721 166 19 80 chr5 37438153 37438568 -162191582 + LTR9 LTR ERV1 1 390 -222 564 212 76 56 chr5 37438537 37438821 -162191329 + LTR19C LTR ERV1 316 779 0 * 1613 138 25 28 chr5 37439107 37439390 -162190760 - LTR23 LTR ERV1 0 437 156 38 0 0 0 chr5 37439669 37439707 -162190443 + AT_rich Low_complexity Low_complexity 1 38 0 953 236 98 41 chr5 37440258 37440627 -162189523 + MLT1B LTR MaLR 1 390 0 1819 173 42 12 chr5 37441073 37441409 -162188741 + MSTB LTR MaLR 1 346 -80 442 232 26 68 chr5 37441443 37441625 -162188525 - LTR34 LTR ERV1 -246 453 187 * 1646 157 31 41 chr5 37441624 37441942 -162188208 - MER50 LTR ERV1 -22 712 398 1452 120 50 17 chr5 37441938 37442179 -162187971 - MER50 LTR ERV1 -485 249 1 * 1040 169 62 31 chr5 37442179 37442404 -162187746 + MLT1B LTR MaLR 159 390 0 2022 113 10 3 chr5 37442579 37442881 -162187269 + AluY SINE Alu 1 304 -7 393 278 146 7 chr5 37443076 37443220 -162186930 - MIR SINE MIR -6 256 93 5384 73 12 6 chr5 37443585 37444272 -162185878 + LTR8 LTR ERV1 1 691 0 855 226 103 148 chr5 37444358 37445076 -162185074 + LTR34 LTR ERV1 10 695 -4 3670 173 125 27 chr5 37445085 37445836 -162184314 + LTR1B LTR ERV1 2 826 0 1477 237 66 29 chr5 37446012 37446363 -162183787 - MLT1A2 LTR MaLR 0 396 1 277 291 55 55 chr5 37447132 37447242 -162182908 + MIR3 SINE MIR 45 154 -54 24 32 0 0 chr5 37447314 37447345 -162182805 + AT_rich Low_complexity Low_complexity 1 31 0 1608 118 175 48 chr5 37447794 37448228 -162181922 + MER1A DNA MER1_type 1 533 0 338 219 19 67 chr5 37448303 37448408 -162181742 - L2 LINE L2 -1 3312 3213 1817 129 7 39 chr5 37448416 37448748 -162181402 - AluSq SINE Alu 0 313 1 1964 150 30 122 chr5 37449822 37450282 -162179868 - MER47B DNA MER2_type 0 418 1 530 279 7 14 chr5 37450546 37450693 -162179457 - L3 LINE CR1 -251 1326 1181 599 311 192 17 chr5 37451037 37451397 -162178753 - L3 LINE CR1 -427 1150 728 476 281 41 63 chr5 37451537 37452046 -162178104 + L1ME4a LINE L1 5620 6117 -4 2291 101 0 0 chr5 37452978 37453284 -162176866 + AluSq SINE Alu 1 306 -7 313 198 73 83 chr5 37453298 37453394 -162176756 - L1ME4a LINE L1 -68 6053 5959 208 362 11 11 chr5 37453653 37453747 -162176403 - MIR SINE MIR -123 139 46 268 223 64 11 chr5 37453895 37453989 -162176161 + G-rich Low_complexity Low_complexity 4 102 0 264 77 0 0 chr5 37454302 37454341 -162175809 + (TG)n Simple_repeat Simple_repeat 2 40 0 1775 162 0 13 chr5 37455288 37455463 -162174687 - AluJo SINE Alu -6 306 135 1830 56 0 24 chr5 37455463 37455714 -162174436 - AluY SINE Alu -7 304 60 1775 162 0 13 chr5 37455714 37455846 -162174304 - AluJo SINE Alu -177 135 3 6067 57 26 1 chr5 37456044 37456812 -162173338 - L1PA7 LINE L1 -1 6153 5367 1842 228 6 0 chr5 37456867 37457226 -162172924 + MLT1A1 LTR MaLR 1 361 -4 29 28 0 0 chr5 37457226 37457262 -162172888 + AT_rich Low_complexity Low_complexity 1 36 0 623 221 43 43 chr5 37457729 37457892 -162172258 - MLT1H LTR MaLR 0 549 387 361 274 28 9 chr5 37457951 37458057 -162172093 + HAL1b LINE L1 395 502 -846 237 269 127 66 chr5 37458058 37458160 -162171990 + HAL1b LINE L1 536 630 -718 1789 190 65 14 chr5 37458160 37458528 -162171622 + MLT1B LTR MaLR 2 388 -2 237 269 127 66 chr5 37458528 37458622 -162171528 + HAL1b LINE L1 630 744 -604 1519 181 22 0 chr5 37458641 37458911 -162171239 + AluJb SINE Alu 1 276 -36 423 0 0 0 chr5 37458911 37458958 -162171192 + (TG)n Simple_repeat Simple_repeat 2 48 0 201 289 67 44 chr5 37459000 37459090 -162171060 + MIR SINE MIR 23 114 -94 2224 110 0 0 chr5 37460963 37461264 -162168886 - AluSq SINE Alu -12 301 1 273 298 119 0 chr5 37461427 37461511 -162168639 - L2 LINE L2 -41 3231 3138 899 221 94 9 chr5 37461550 37461763 -162168387 - MIR SINE MIR -27 235 5 233 367 75 7 chr5 37461917 37462064 -162168086 - L2 LINE L2 -337 2977 2821 1844 144 87 31 chr5 37462205 37462560 -162167590 + THE1C LTR MaLR 1 375 0 194 0 39 0 chr5 37463111 37463137 -162167013 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2109 99 0 0 chr5 37463142 37463424 -162166726 - AluSp SINE Alu -31 282 1 186 286 48 16 chr5 37463487 37463550 -162166600 - MIR SINE MIR -193 69 5 2500 240 105 17 chr5 37463967 37464631 -162165519 + MER97a DNA MER1_type? 1 750 -144 2258 78 3 0 chr5 37464631 37464924 -162165226 - AluSp SINE Alu -19 294 1 2500 240 105 17 chr5 37464924 37465066 -162165084 + MER97a DNA MER1_type? 750 878 -16 598 307 57 57 chr5 37465081 37465433 -162164717 + LTR33 LTR ERVL 3 354 -167 503 286 31 21 chr5 37465439 37465631 -162164519 - LTR33 LTR ERVL -2 519 326 440 285 124 11 chr5 37465661 37465847 -162164303 - LTR33 LTR ERVL -312 209 3 1687 243 155 16 chr5 37465893 37466473 -162163677 + LTR50 LTR ERVL 2 662 -133 497 293 20 20 chr5 37466477 37466627 -162163523 + MLT1J2 LTR MaLR 277 426 -24 663 65 0 0 chr5 37467803 37467896 -162162254 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 631 212 18 0 chr5 37467897 37468010 -162162140 - FLAM_C SINE Alu -27 116 2 2347 186 72 67 chr5 37468541 37468873 -162161277 + MLT1E2 LTR MaLR 1 339 -287 570 241 9 0 chr5 37468873 37468989 -162161161 + FLAM_A SINE Alu 1 117 -16 2347 186 72 67 chr5 37468989 37469279 -162160871 + MLT1E2 LTR MaLR 339 626 0 229 271 35 0 chr5 37469756 37469841 -162160309 + MER113 DNA MER1_type? 4 91 -430 1986 139 0 16 chr5 37469864 37470180 -162159970 - AluSx SINE Alu -1 311 1 222 372 36 44 chr5 37470476 37470613 -162159537 - L2 LINE L2 0 3272 3137 1139 205 37 118 chr5 37470750 37470899 -162159251 + MLT1G LTR MaLR 11 170 -360 2643 220 29 0 chr5 37470899 37471450 -162158700 - MLT1F1 LTR MaLR 0 567 1 1139 205 37 118 chr5 37471450 37471692 -162158458 + MLT1G LTR MaLR 170 300 -230 1889 177 28 17 chr5 37471692 37472053 -162158097 + MLT1A1 LTR MaLR 1 365 0 1139 205 37 118 chr5 37472053 37472151 -162157999 + MLT1G LTR MaLR 300 404 -126 469 332 58 10 chr5 37472209 37472417 -162157733 + MIR SINE MIR 1 218 -44 586 274 97 49 chr5 37472823 37473175 -162156975 + MLT1J LTR MaLR 132 450 0 738 316 9 0 chr5 37473709 37473934 -162156216 - MIR SINE MIR -16 246 20 613 211 58 18 chr5 37474051 37474222 -162155928 - L1ME3A LINE L1 -22 6148 5971 804 243 102 49 chr5 37475172 37475599 -162154551 + LTR33 LTR ERVL 15 521 0 939 67 0 0 chr5 37475949 37476069 -162154081 - AluSg/x SINE Alu -13 299 180 1787 142 34 7 chr5 37528385 37528680 -162101470 - AluJb SINE Alu -9 303 1 495 232 56 50 chr5 37528917 37529115 -162101035 + L1ME4a LINE L1 5921 6119 -2 662 195 36 67 chr5 37529653 37529848 -162100302 - MER53 DNA DNA 0 189 1 414 0 0 0 chr5 37529878 37529924 -162100226 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1931 175 30 9 chr5 37529973 37530310 -162099840 + MER2 DNA MER2_type 1 344 0 342 305 29 0 chr5 37531015 37531120 -162099030 + MIR3 SINE MIR 78 185 -23 1730 155 0 0 chr5 37531385 37531636 -162098514 + AluSq SINE Alu 1 251 -62 253 268 12 37 chr5 37531795 37531877 -162098273 - L2 LINE L2 0 3313 3234 2192 170 61 42 chr5 37532053 37532511 -162097639 + MLT1C LTR MaLR 1 467 0 1713 142 61 24 chr5 37532512 37532808 -162097342 + AluJb SINE Alu 1 307 -5 282 290 70 23 chr5 37533479 37533611 -162096539 - MIR SINE MIR -58 150 6 376 235 60 100 chr5 37533791 37533864 -162096286 - MIR SINE MIR -51 211 137 1970 149 17 3 chr5 37533864 37534165 -162095985 - AluJb SINE Alu -6 306 2 376 235 60 100 chr5 37534165 37534291 -162095859 - MIR SINE MIR -125 137 20 403 296 114 11 chr5 37534319 37534495 -162095655 - MER117 DNA MER1_type 0 197 4 1426 96 0 0 chr5 37534577 37534774 -162095376 + L1PA14 LINE L1 5960 6156 -5 2105 146 0 0 chr5 37535005 37535307 -162094843 + AluSx SINE Alu 1 302 -10 331 248 179 14 chr5 37535317 37535462 -162094688 - MIR SINE MIR 0 262 94 630 244 61 83 chr5 37535668 37535898 -162094252 + MER115 DNA AcHobo 302 526 -167 529 241 71 50 chr5 37535997 37536138 -162094012 + MER117 DNA MER1_type 54 197 0 * 715 253 6 0 chr5 37536138 37536304 -162093846 + MER115 DNA AcHobo 526 692 -1 347 298 33 13 chr5 37536623 37536774 -162093376 + LTR67 LTR ERVL 387 540 -17 1545 199 80 17 chr5 37536934 37537286 -162092864 + MLT1A2 LTR MaLR 1 374 0 399 175 116 84 chr5 37539544 37539751 -162090399 - MER34 LTR ERV1 -5 739 347 202 259 49 25 chr5 37540177 37540258 -162089892 + L2 LINE L2 3227 3309 -4 340 298 85 64 chr5 37540320 37540649 -162089501 + L2 LINE L2 2210 2545 -769 2684 192 59 9 chr5 37540650 37541208 -162088942 + L1MB2 LINE L1 5577 6162 -9 2724 187 72 19 chr5 37541454 37542040 -162088110 - LTR27 LTR ERV1 -16 620 1 30 0 0 0 chr5 37542186 37542216 -162087934 + AT_rich Low_complexity Low_complexity 1 30 0 217 153 17 34 chr5 37542585 37542644 -162087506 + T-rich Low_complexity Low_complexity 2 59 0 2032 131 50 39 chr5 37543305 37543665 -162086485 + THE1B LTR MaLR 1 364 0 189 171 0 0 chr5 37543926 37543961 -162086189 + GA-rich Low_complexity Low_complexity 2 36 0 605 263 77 29 chr5 37544563 37544772 -162085378 + MIR SINE MIR 40 258 -4 2725 179 69 49 chr5 37545269 37545946 -162084204 - LTR8 LTR ERV1 0 691 1 649 236 11 73 chr5 37546248 37546439 -162083711 + MER97a DNA MER1_type? 1 179 -715 2814 96 0 16 chr5 37546503 37546879 -162083271 - LTR8 LTR ERV1 0 691 322 1815 161 167 65 chr5 37547093 37547238 -162082912 - LTR49 LTR ERV1 0 595 466 1725 180 10 7 chr5 37547238 37547538 -162082612 + AluJb SINE Alu 1 301 -11 1815 161 167 65 chr5 37547538 37547932 -162082218 - LTR49 LTR ERV1 -129 466 1 475 99 0 14 chr5 37548003 37548074 -162082076 + LTR26B LTR ERV1 1 70 -461 3807 115 21 23 chr5 37548074 37548640 -162081510 + MER61E LTR ERV1 1 565 -4 3893 160 64 10 chr5 37548658 37549333 -162080817 - MER50 LTR ERV1 -23 711 1 2910 162 0 11 chr5 37549333 37549795 -162080355 + LTR26B LTR ERV1 75 531 0 1601 175 39 44 chr5 37549795 37550132 -162080018 + MLT1C LTR MaLR 29 363 -104 2983 166 101 37 chr5 37550135 37550787 -162079363 + LTR8A LTR ERV1 34 727 0 652 157 9 17 chr5 37550788 37550903 -162079247 + MLT1C LTR MaLR 352 465 -2 2089 174 32 108 chr5 37550955 37551426 -162078724 - MER61E LTR ERV1 -43 526 92 430 213 56 86 chr5 37551413 37551649 -162078501 - MER61E LTR ERV1 -455 324 1 * 854 214 113 39 chr5 37551649 37552063 -162078087 - LTR56 LTR ERV1 -20 556 9 1396 193 52 137 chr5 37552692 37553107 -162077043 - MER34C LTR ERV1 -3 582 133 2252 108 7 0 chr5 37553107 37553414 -162076736 - AluSq SINE Alu -2 311 3 1396 193 52 137 chr5 37553414 37553483 -162076667 - MER34C LTR ERV1 -452 133 155 1955 134 31 0 chr5 37553483 37553774 -162076376 + AluSq SINE Alu 7 306 -7 1396 193 52 137 chr5 37553774 37553885 -162076265 - MER34C LTR ERV1 -429 156 37 601 246 90 37 chr5 37554191 37554435 -162075715 + MIR SINE MIR 6 262 0 890 269 8 16 chr5 37554453 37554698 -162075452 + MIR SINE MIR 20 262 0 2113 104 0 14 chr5 37554850 37555171 -162074979 - AluSx SINE Alu 0 317 1 23 0 0 0 chr5 37556017 37556040 -162074110 + AT_rich Low_complexity Low_complexity 1 23 0 240 206 78 128 chr5 37556669 37556810 -162073340 + LTR67 LTR ERVL 2 135 -422 596 286 30 5 chr5 37556948 37557147 -162073003 + LTR67 LTR ERVL 354 557 0 1030 154 0 0 chr5 37557502 37557658 -162072492 - MLT2B1 LTR ERVL 0 520 365 681 149 0 10 chr5 37557661 37557916 -162072234 + AluJ SINE Alu 11 311 -1 286 157 20 0 chr5 37557930 37557981 -162072169 - MLT1A1 LTR MaLR -313 52 1 4165 182 103 10 chr5 37557996 37558880 -162071270 - Charlie1a DNA MER1_type -489 966 1 1897 144 33 16 chr5 37559061 37559366 -162070784 - AluSx SINE Alu -2 310 1 452 290 145 5 chr5 37559389 37559589 -162070561 - MIR SINE MIR -4 258 31 476 292 25 6 chr5 37560077 37560238 -162069912 + MIR SINE MIR 28 191 -71 459 195 76 34 chr5 37560493 37560611 -162069539 - MER103 DNA DNA -1 165 43 1677 157 105 0 chr5 37560664 37560969 -162069181 + MER44D DNA MER2_type 1 607 -2 261 343 35 21 chr5 37561296 37561439 -162068711 - MIR3 SINE MIR -27 181 37 224 196 39 0 chr5 37562008 37562059 -162068091 + GA-rich Low_complexity Low_complexity 4 56 0 200 153 51 17 chr5 37562211 37562270 -162067880 + T-rich Low_complexity Low_complexity 5 65 0 2047 157 27 29 chr5 37563044 37563262 -162066888 - MLT1B LTR MaLR 0 390 172 1960 120 4 0 chr5 37563262 37563538 -162066612 - AluSx SINE Alu -2 310 34 2047 157 27 29 chr5 37563538 37563695 -162066455 - MLT1B LTR MaLR -218 172 16 221 355 53 33 chr5 37563764 37563916 -162066234 + MIR3 SINE MIR 17 171 -37 6700 60 5 0 chr5 37564176 37565168 -162064982 - HERVL LTR ERVL -360 5294 4257 1411 78 16 3 chr5 37565168 37565363 -162064787 - MLT2A1 LTR ERVL -201 213 1 239 284 34 0 chr5 37566740 37566828 -162063322 + MLT1C LTR MaLR 1 91 -376 * 524 191 0 9 chr5 37566825 37566930 -162063220 + MLT1C LTR MaLR 364 467 0 247 261 141 11 chr5 37567398 37567490 -162062660 + MIR SINE MIR 79 182 -80 1248 299 28 14 chr5 37568522 37568947 -162061203 + LTR16A LTR ERVL 16 446 -4 288 243 23 10 chr5 37569405 37569504 -162060646 + MIR SINE MIR 54 152 -66 800 288 107 30 chr5 37569581 37569974 -162060176 - L3 LINE CR1 -100 1477 1055 472 313 88 51 chr5 37570279 37570653 -162059497 - MLT1L LTR MaLR -227 388 1 2141 104 31 0 chr5 37570782 37571070 -162059080 + AluSx SINE Alu 1 297 -15 248 53 26 0 chr5 37571072 37571110 -162059040 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 894 186 0 0 chr5 37571113 37571253 -162058897 - AluJb SINE Alu -26 286 147 315 304 138 6 chr5 37571389 37571570 -162058580 - L3 LINE CR1 -355 1222 1018 21 82 0 0 chr5 37571587 37571636 -162058514 + AT_rich Low_complexity Low_complexity 1 49 0 205 195 49 122 chr5 37571884 37571940 -162058210 - L3 LINE CR1 -547 1030 980 2270 125 3 0 chr5 37571940 37572244 -162057906 - AluSq SINE Alu -8 305 1 205 195 49 122 chr5 37572244 37572269 -162057881 - L3 LINE CR1 -597 980 955 279 311 15 30 chr5 37572337 37572469 -162057681 - L3 LINE CR1 -673 904 775 214 255 0 0 chr5 37572702 37572749 -162057401 + (CA)n Simple_repeat Simple_repeat 1 47 0 453 127 0 0 chr5 37572764 37572835 -162057315 - MER41E LTR ERV1 -120 392 322 1373 212 21 65 chr5 37573032 37573414 -162056736 - MLT1A1 LTR MaLR 0 365 1 1768 183 3 13 chr5 37573467 37573779 -162056371 - AluJb SINE Alu -2 310 2 1965 184 91 16 chr5 37574812 37575241 -162054909 - MLT1C LTR MaLR 0 467 7 2182 127 0 13 chr5 37575352 37575668 -162054482 + AluSx SINE Alu 1 312 0 641 292 64 0 chr5 37575687 37575923 -162054227 + MIR SINE MIR 2 252 -10 2051 171 28 15 chr5 37576271 37576662 -162053488 + MSTD LTR MaLR 1 396 0 286 294 103 27 chr5 37576675 37576821 -162053329 - MIR SINE MIR -65 197 41 2397 92 16 0 chr5 37577010 37577315 -162052835 + AluSx SINE Alu 1 310 -2 1852 164 11 0 chr5 37577605 37577892 -162052258 + AluSx SINE Alu 1 290 -22 247 278 63 48 chr5 37578059 37578185 -162051965 + MIR SINE MIR 100 227 -35 1992 206 25 21 chr5 37579074 37579551 -162050599 + Charlie4a DNA MER1_type 27 505 -3 1620 182 0 21 chr5 37579738 37580024 -162050126 + AluSq SINE Alu 16 295 -18 514 259 24 29 chr5 37580525 37580695 -162049455 + MER45A DNA AcHobo 10 178 0 1204 212 94 26 chr5 37580792 37581190 -162048960 + MLT2B1 LTR ERVL 2 457 -63 2162 112 3 3 chr5 37581202 37581497 -162048653 - AluSx SINE Alu -11 301 7 1573 231 138 18 chr5 37581676 37582127 -162048023 - MLT1D LTR MaLR 0 505 1 227 273 36 0 chr5 37582319 37582374 -162047776 + G-rich Low_complexity Low_complexity 6 62 0 1512 188 0 31 chr5 37583094 37583381 -162046769 - AluJb SINE Alu -20 292 15 2324 101 3 0 chr5 37583405 37583701 -162046449 - AluSx SINE Alu -15 297 1 484 274 132 38 chr5 37584157 37584497 -162045653 + L2 LINE L2 2468 2839 -475 360 264 20 74 chr5 37584566 37584714 -162045436 - MIR SINE MIR -23 239 100 336 238 42 35 chr5 37584901 37585044 -162045106 + L1ME4a LINE L1 5960 6103 -18 576 284 108 22 chr5 37585044 37585312 -162044838 + L2 LINE L2 3023 3313 0 874 167 0 14 chr5 37586057 37586201 -162043949 + AluJb SINE Alu 150 291 -21 419 287 56 7 chr5 37586767 37586910 -162043240 + MIR SINE MIR 3 152 -110 622 315 121 30 chr5 37586915 37587171 -162042979 + LTR33 LTR ERVL 89 395 -126 2072 152 118 0 chr5 37587171 37587552 -162042598 - MSTC LTR MaLR -2 426 1 622 315 121 30 chr5 37587552 37587692 -162042458 + LTR33 LTR ERVL 395 521 0 744 208 45 0 chr5 37587886 37588040 -162042110 + LTR33A LTR ERVL 363 523 0 243 276 0 13 chr5 37588041 37588117 -162042033 + MIR SINE MIR 110 184 -78 2258 106 0 23 chr5 37588248 37588549 -162041601 + AluSx SINE Alu 5 298 -14 865 199 4 3 chr5 37589805 37590041 -162040109 + AluJb SINE Alu 1 305 -7 1411 165 95 22 chr5 37591456 37591617 -162038533 - AluJo SINE Alu -13 299 108 243 0 0 0 chr5 37591617 37591644 -162038506 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1411 165 95 22 chr5 37591644 37591755 -162038395 - AluJo SINE Alu -204 108 7 469 268 155 10 chr5 37592079 37592273 -162037877 + MIR SINE MIR 28 249 -13 289 178 69 59 chr5 37592785 37592886 -162037264 - MIR SINE MIR -21 241 140 1110 316 131 9 chr5 37592890 37593342 -162036808 + LTR33 LTR ERVL 15 521 0 316 205 197 60 chr5 37593342 37593459 -162036691 - MIR SINE MIR -109 153 21 1797 162 3 29 chr5 37593817 37594126 -162036024 - AluJo SINE Alu -7 305 5 233 333 15 0 chr5 37594612 37594678 -162035472 + MIR SINE MIR 8 74 -188 1071 284 62 5 chr5 37594679 37595066 -162035084 - LTR16C LTR ERVL -2 489 81 636 315 60 4 chr5 37595722 37595973 -162034177 - ERVL LTR ERVL -858 4906 4642 1554 216 14 3 chr5 37596386 37596682 -162033468 + AluJo SINE Alu 1 299 -13 237 365 58 0 chr5 37596696 37596800 -162033350 + MIR SINE MIR 34 143 -65 2791 156 61 20 chr5 37596984 37597297 -162032853 - MLT2B2 LTR ERVL 0 515 173 2293 151 92 0 chr5 37597297 37597689 -162032461 + MSTC LTR MaLR 1 428 0 2791 156 61 20 chr5 37597689 37597870 -162032280 - MLT2B2 LTR ERVL -342 173 1 256 310 123 39 chr5 37598558 37598713 -162031437 + MIR3 SINE MIR 28 195 -13 604 294 83 24 chr5 37598741 37599030 -162031120 + L2 LINE L2 3005 3310 -3 2300 84 7 0 chr5 37599066 37599350 -162030800 + AluSg SINE Alu 1 286 -24 2190 136 0 3 chr5 37599602 37599911 -162030239 + AluSx SINE Alu 1 308 -4 504 279 0 0 chr5 37600039 37600175 -162029975 + MIR SINE MIR 18 153 -109 843 284 111 31 chr5 37600206 37600629 -162029521 + LTR33 LTR ERVL 47 503 -18 272 279 0 0 chr5 37600666 37600745 -162029405 + MIR SINE MIR 183 261 -1 562 246 8 15 chr5 37601073 37601203 -162028947 + MER45A DNA AcHobo 47 175 -3 264 30 0 0 chr5 37602194 37602227 -162027923 + (CA)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr5 37603074 37603097 -162027053 + AT_rich Low_complexity Low_complexity 1 23 0 2298 99 0 0 chr5 37603570 37603852 -162026298 - AluSc SINE Alu -27 282 1 2002 135 3 13 chr5 37604226 37604530 -162025620 + AluSx SINE Alu 1 301 -11 829 204 0 0 chr5 37604814 37604961 -162025189 + FAM SINE Alu 12 158 -27 1538 98 22 40 chr5 37604963 37605187 -162024963 + MER30 DNA MER1_type 11 230 0 898 153 0 0 chr5 37605214 37605345 -162024805 + FLAM_C SINE Alu 6 136 -7 1971 150 3 19 chr5 37606036 37606350 -162023800 + AluSq SINE Alu 1 309 -4 22 56 0 0 chr5 37606478 37606514 -162023636 + AT_rich Low_complexity Low_complexity 1 36 0 1131 241 74 83 chr5 37607116 37607207 -162022943 - MLT1L LTR MaLR -31 584 494 1869 183 29 18 chr5 37607207 37607590 -162022560 - MLT1B LTR MaLR -3 387 1 1131 241 74 83 chr5 37607590 37608051 -162022099 - MLT1L LTR MaLR -121 494 37 2153 130 17 0 chr5 37608730 37609031 -162021119 - AluJb SINE Alu -6 306 1 191 214 143 14 chr5 37609469 37609539 -162020611 + L3 LINE CR1 1148 1226 -351 688 80 0 0 chr5 37609793 37609881 -162020269 + AluSg/x SINE Alu 213 300 -10 2611 64 0 3 chr5 37609917 37610229 -162019921 - AluY SINE Alu 0 311 1 180 344 0 0 chr5 37610342 37610403 -162019747 - L3 LINE CR1 -34 1543 1483 2028 161 18 21 chr5 37610454 37610790 -162019360 - MER2 DNA MER2_type -10 335 1 419 368 35 56 chr5 37610818 37611193 -162018957 - L2 LINE L2 0 3272 2906 1641 186 13 10 chr5 37611203 37611504 -162018646 - AluJb SINE Alu -7 305 4 1893 149 30 10 chr5 37612816 37613118 -162017032 + AluJb SINE Alu 1 308 -4 2223 148 77 17 chr5 37613291 37613695 -162016455 + MSTA LTR MaLR 1 428 0 351 60 0 0 chr5 37615120 37615170 -162014980 + (A)n Simple_repeat Simple_repeat 1 50 0 496 311 91 20 chr5 37615529 37615870 -162014280 + L1ME4a LINE L1 5524 5888 -233 4040 107 140 56 chr5 37615934 37616216 -162013934 + Tigger3(Golem) DNA MER2_type 2 259 -2770 2520 63 0 3 chr5 37616216 37616519 -162013631 - AluY SINE Alu -9 302 1 4040 107 140 56 chr5 37616519 37616558 -162013592 + Tigger3(Golem) DNA MER2_type 259 293 -2736 2148 124 7 0 chr5 37616558 37616856 -162013294 - AluSq SINE Alu -13 300 1 4040 107 140 56 chr5 37616856 37617225 -162012925 + Tigger3(Golem) DNA MER2_type 293 630 -2399 2192 118 10 0 chr5 37617225 37617531 -162012619 - AluSx SINE Alu -3 309 1 4040 107 140 56 chr5 37617531 37617625 -162012525 + Tigger3(Golem) DNA MER2_type 630 715 -2314 281 89 22 0 chr5 37617625 37617670 -162012480 + (CTCA)n Simple_repeat Simple_repeat 1 46 0 4040 107 140 56 chr5 37617670 37617753 -162012397 + Tigger3(Golem) DNA MER2_type 715 790 -2239 1800 184 0 13 chr5 37617753 37618069 -162012081 - AluJo SINE Alu 0 312 1 4040 107 140 56 chr5 37618069 37618341 -162011809 + Tigger3(Golem) DNA MER2_type 790 3028 -1 298 273 0 0 chr5 37618372 37618438 -162011712 + L1ME4a LINE L1 5987 6052 -69 789 214 23 6 chr5 37618903 37619076 -162011074 - MER45A DNA AcHobo -2 176 1 261 139 0 0 chr5 37619292 37619335 -162010815 + (GGGA)n Simple_repeat Simple_repeat 3 45 0 261 0 0 0 chr5 37619552 37619581 -162010569 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1245 158 206 0 chr5 37619584 37619812 -162010338 - AluJo SINE Alu -35 277 3 464 110 12 0 chr5 37619851 37619933 -162010217 + L1MA4A LINE L1 6220 6302 -1 272 336 82 0 chr5 37620096 37620206 -162009944 + MIR SINE MIR 82 200 -62 2079 127 10 0 chr5 37620892 37621183 -162008967 + AluSx SINE Alu 1 294 -18 562 81 0 0 chr5 37621191 37621265 -162008885 + Alu SINE Alu 2 75 -236 270 0 0 0 chr5 37621516 37621546 -162008604 + (TG)n Simple_repeat Simple_repeat 2 31 0 421 281 97 71 chr5 37622215 37622303 -162007847 - L2 LINE L2 -1 3312 3228 2024 125 28 0 chr5 37622303 37622592 -162007558 + AluSx SINE Alu 3 299 -13 2205 107 7 0 chr5 37622594 37622884 -162007266 + AluSg SINE Alu 1 292 -18 421 281 97 71 chr5 37622884 37623483 -162006667 - L2 LINE L2 -85 3228 2601 829 169 0 0 chr5 37624108 37624238 -162005912 - FLAM_C SINE Alu -3 130 1 2102 137 0 0 chr5 37624242 37624565 -162005585 - AluSx SINE Alu 0 323 1 352 338 33 26 chr5 37624631 37624782 -162005368 + MIR SINE MIR 1 152 -110 845 163 7 13 chr5 37626386 37626539 -162003611 + MLT1A2 LTR MaLR 1 152 -213 1745 146 14 41 chr5 37626543 37626678 -162003472 + AluJb SINE Alu 1 138 -174 2338 107 0 0 chr5 37626678 37626977 -162003173 + AluSc SINE Alu 1 299 -10 1745 146 14 41 chr5 37626977 37627136 -162003014 + AluJb SINE Alu 138 287 -25 36 19 0 19 chr5 37627159 37627197 -162002953 + AT_rich Low_complexity Low_complexity 1 39 -14 2394 91 3 0 chr5 37627197 37627505 -162002645 - AluSc SINE Alu 0 309 1 36 19 0 19 chr5 37627505 37627520 -162002630 + AT_rich Low_complexity Low_complexity 39 53 0 962 228 5 24 chr5 37627520 37627731 -162002419 + MLT1A2 LTR MaLR 157 363 -11 259 235 0 29 chr5 37627926 37627994 -162002156 - L2 LINE L2 -2 3270 3205 2183 232 114 21 chr5 37628203 37628862 -162001288 + HsTC2c DNA Tc2 1 720 -9 667 224 94 50 chr5 37628922 37629123 -162001027 - MER63A DNA MER1_type 0 210 1 4144 126 14 22 chr5 37629353 37630021 -162000129 + Tigger3b DNA MER2_type 1 662 -569 340 39 77 0 chr5 37630061 37630113 -162000037 + Tigger3b DNA MER2_type 650 705 -527 2143 102 6 35 chr5 37630132 37630447 -161999703 - AluSx SINE Alu -6 306 1 183 320 67 62 chr5 37630476 37630654 -161999496 - L2 LINE L2 -371 2943 2765 319 220 0 90 chr5 37630831 37630931 -161999219 + MIR SINE MIR 92 182 -80 267 256 13 0 chr5 37630999 37631077 -161999073 + MIR3 SINE MIR 129 207 -1 560 293 5 25 chr5 37631659 37631857 -161998293 - MIR SINE MIR -20 242 49 22 35 0 0 chr5 37632776 37632805 -161997345 + AT_rich Low_complexity Low_complexity 1 29 0 1456 206 33 7 chr5 37632805 37633081 -161997069 - AluJo SINE Alu -23 289 7 304 248 183 0 chr5 37633584 37633721 -161996429 + L2 LINE L2 3011 3172 -141 1692 175 32 66 chr5 37633768 37633816 -161996334 + MLT1A1 LTR MaLR 1 49 -316 2257 130 31 0 chr5 37633816 37634169 -161995981 + THE1B LTR MaLR 1 364 0 1692 175 32 66 chr5 37634169 37634498 -161995652 + MLT1A1 LTR MaLR 49 365 0 240 281 22 0 chr5 37634501 37634590 -161995560 + L2 LINE L2 3182 3272 0 788 219 24 6 chr5 37634719 37634888 -161995262 + MER58B DNA MER1_type 167 338 -3 2227 129 0 0 chr5 37635036 37635338 -161994812 - AluSx SINE Alu -9 303 2 26 50 0 0 chr5 37635345 37635385 -161994765 + AT_rich Low_complexity Low_complexity 1 40 0 962 278 53 32 chr5 37635419 37635757 -161994393 - MLT1I LTR MaLR -2 407 63 2027 167 10 52 chr5 37636744 37637151 -161992999 - MLT1B LTR MaLR 0 390 1 1791 157 33 0 chr5 37637183 37637485 -161992665 + AluJb SINE Alu 1 311 0 288 0 0 0 chr5 37637590 37637622 -161992528 + (TG)n Simple_repeat Simple_repeat 1 32 0 2377 103 3 0 chr5 37637655 37637967 -161992183 + AluSp SINE Alu 1 313 0 423 285 20 31 chr5 37638230 37638573 -161991577 - L1MEd LINE L1 -4738 1572 1199 2885 49 11 0 chr5 37638573 37638922 -161991228 - L1PA7 LINE L1 -8 6146 5794 423 285 20 31 chr5 37638922 37639122 -161991028 - L1MEd LINE L1 -5111 1199 998 1162 210 102 42 chr5 37639122 37639455 -161990695 - MSTD LTR MaLR 0 396 44 239 162 0 149 chr5 37639495 37639643 -161990507 - AluSp/q SINE Alu -13 290 165 882 267 43 89 chr5 37639782 37640154 -161989996 - L1MEd LINE L1 -5187 932 597 1706 154 0 39 chr5 37640154 37640439 -161989711 - AluJb SINE Alu -21 291 18 882 267 43 89 chr5 37640439 37640673 -161989477 - L1MEd LINE L1 -5522 597 354 266 351 14 7 chr5 37640788 37640936 -161989214 - L1MEd LINE L1 -5966 153 5 2016 155 62 6 chr5 37641102 37641265 -161988885 - THE1C LTR MaLR 0 375 223 231 36 0 0 chr5 37641265 37641293 -161988857 + (GA)n Simple_repeat Simple_repeat 1 28 0 2016 155 62 6 chr5 37641293 37641484 -161988666 - THE1C LTR MaLR -152 223 1 1687 142 0 31 chr5 37641533 37641822 -161988328 + AluSq SINE Alu 6 285 -28 324 0 0 0 chr5 37641822 37641858 -161988292 + (CA)n Simple_repeat Simple_repeat 2 37 0 480 245 192 37 chr5 37643266 37643621 -161986529 + MLT1G1 LTR MaLR 24 472 -123 191 129 0 0 chr5 37643840 37643871 -161986279 + MER5B DNA MER1_type 3 33 -145 39263 83 8 8 chr5 37643966 37650113 -161980037 - L1PA6 LINE L1 0 6154 11 2204 119 0 0 chr5 37650209 37650503 -161979647 + AluSx SINE Alu 1 294 -18 788 246 20 10 chr5 37650854 37651053 -161979097 - MIR SINE MIR -13 249 49 768 185 83 74 chr5 37651140 37651356 -161978794 + AluJo SINE Alu 1 218 -94 246 174 0 0 chr5 37651359 37651405 -161978745 + AluJb SINE Alu 87 132 -1 23 68 0 0 chr5 37651420 37651464 -161978686 + AT_rich Low_complexity Low_complexity 1 44 0 2246 109 7 0 chr5 37652615 37652909 -161977241 + AluSx SINE Alu 1 296 -16 1836 183 20 0 chr5 37653010 37653316 -161976834 + AluJb SINE Alu 1 312 0 992 141 58 0 chr5 37653458 37653614 -161976536 + AluJb SINE Alu 136 300 -12 2186 123 0 16 chr5 37653614 37653922 -161976228 + AluSg SINE Alu 1 303 -7 435 222 40 24 chr5 37654329 37654455 -161975695 + MER5B DNA MER1_type 51 178 0 370 290 90 0 chr5 37654907 37655052 -161975098 + MIR SINE MIR 30 187 -75 810 265 39 35 chr5 37655104 37655293 -161974857 + MIR SINE MIR 3 195 -67 431 264 0 69 chr5 37655293 37655437 -161974713 - MER94 DNA DNA 0 134 1 810 265 39 35 chr5 37655437 37655504 -161974646 + MIR SINE MIR 195 260 -2 1155 194 94 10 chr5 37655520 37655819 -161974331 - MER33 DNA MER1_type 0 324 1 1556 125 7 88 chr5 37656807 37657102 -161973048 + AluJb SINE Alu 4 274 -38 437 125 0 25 chr5 37657131 37657211 -161972939 + (GGAA)n Simple_repeat Simple_repeat 4 81 0 254 284 71 41 chr5 37657224 37657393 -161972757 - MIR3 SINE MIR -32 176 2 25 0 0 0 chr5 37659541 37659566 -161970584 + GC_rich Low_complexity Low_complexity 1 25 0 25 51 0 0 chr5 37660068 37660107 -161970043 + GC_rich Low_complexity Low_complexity 1 39 0 212 191 0 24 chr5 37661743 37661785 -161968365 + CT-rich Low_complexity Low_complexity 3 43 0 2218 84 3 25 chr5 37661810 37662120 -161968030 + AluSc SINE Alu 1 304 0 1609 183 47 0 chr5 37662574 37662853 -161967297 - AluJb SINE Alu -20 292 1 198 103 0 0 chr5 37662893 37662922 -161967228 + (TTTTTA)n Simple_repeat Simple_repeat 4 32 0 1891 136 8 0 chr5 37663211 37663475 -161966675 + AluJb SINE Alu 18 283 -29 2154 82 4 14 chr5 37663477 37663758 -161966392 + AluSp SINE Alu 29 306 -7 280 307 47 8 chr5 37663833 37663960 -161966190 + MIR3 SINE MIR 66 197 -11 227 132 38 57 chr5 37664104 37664157 -161965993 - U13 snRNA snRNA -52 52 1 667 262 226 21 chr5 37664157 37664350 -161965800 + L2 LINE L2 2909 3061 -252 1071 179 57 35 chr5 37664350 37664579 -161965571 - MER46A DNA MER2_type -1 235 2 667 262 226 21 chr5 37664579 37664721 -161965429 + L2 LINE L2 3061 3313 0 1241 190 0 14 chr5 37665166 37665387 -161964763 - AluJo SINE Alu -94 218 1 2255 111 0 22 chr5 37666020 37666336 -161963814 - AluSx SINE Alu -1 311 3 1843 175 3 7 chr5 37666536 37666845 -161963305 + AluJb SINE Alu 1 308 -4 692 161 22 36 chr5 37667528 37667665 -161962485 + AluJb SINE Alu 2 136 -176 583 101 22 0 chr5 37667673 37667762 -161962388 + AluY SINE Alu 219 309 -2 21 0 0 0 chr5 37667926 37667947 -161962203 + AT_rich Low_complexity Low_complexity 1 21 0 2791 98 7 65 chr5 37667947 37668304 -161961846 - L1PB1 LINE L1 -1 6150 5824 1011 161 0 0 chr5 37668304 37668484 -161961666 + (TA)n Simple_repeat Simple_repeat 1 180 0 2791 98 7 65 chr5 37668484 37668585 -161961565 - L1PB1 LINE L1 -327 5824 5719 204 40 0 0 chr5 37668800 37668825 -161961325 + (T)n Simple_repeat Simple_repeat 1 25 0 216 313 102 8 chr5 37670326 37670454 -161959696 - MIR SINE MIR -122 140 1 1830 166 7 3 chr5 37670556 37670852 -161959298 - AluJb SINE Alu -15 297 1 24 0 0 0 chr5 37670858 37670882 -161959268 + AT_rich Low_complexity Low_complexity 1 24 0 2188 107 0 3 chr5 37671434 37671723 -161958427 + AluSx SINE Alu 11 298 -14 2307 105 0 0 chr5 37672174 37672469 -161957681 - AluSc SINE Alu -14 295 1 325 316 63 19 chr5 37673599 37673757 -161956393 + MIR SINE MIR 28 192 -70 34 0 0 0 chr5 37673766 37673800 -161956350 + AT_rich Low_complexity Low_complexity 1 34 0 1015 156 113 59 chr5 37674876 37675186 -161954964 - MER33 DNA MER1_type -5 319 1 319 169 46 0 chr5 37676846 37676911 -161953239 + MLT1K LTR MaLR 520 587 -1 2144 125 0 13 chr5 37677896 37678201 -161951949 - AluSx SINE Alu -9 303 3 2254 100 0 7 chr5 37678212 37678511 -161951639 - AluSc SINE Alu -12 297 1 2286 227 61 30 chr5 37678519 37678785 -161951365 - L1MB7 LINE L1 0 6184 5928 2089 126 7 7 chr5 37678785 37679087 -161951063 + AluJo SINE Alu 1 302 -10 2286 227 61 30 chr5 37679087 37679462 -161950688 - L1MB7 LINE L1 -256 5928 5523 1931 139 41 0 chr5 37680470 37680765 -161949385 - AluSg SINE Alu -3 307 1 1868 132 38 11 chr5 37680766 37681053 -161949097 - AluJo SINE Alu -17 295 1 447 70 70 0 chr5 37681148 37681219 -161948931 + MADE1 DNA Mariner 5 80 0 999 154 0 0 chr5 37681405 37681578 -161948572 - AluSg/x SINE Alu 0 306 134 2030 156 93 3 chr5 37681675 37682028 -161948122 + MLT1B LTR MaLR 1 385 -5 197 33 33 0 chr5 37682633 37682663 -161947487 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 1556 232 79 3 chr5 37683534 37683901 -161946249 - MSTD LTR MaLR 0 396 2 188 307 57 11 chr5 37683994 37684082 -161946068 + L2 LINE L2 2962 3053 -219 1310 153 14 32 chr5 37684820 37685036 -161945114 - AluJo SINE Alu -22 290 79 418 254 133 32 chr5 37685552 37685819 -161944331 + MLT1G1 LTR MaLR 24 344 -230 6565 70 15 0 chr5 37686309 37687164 -161942986 - L1PA6 LINE L1 0 6154 5287 7834 122 6 3 chr5 37687284 37688421 -161941729 - HERVK9 LTR ERVK -282 5634 4494 237 322 11 0 chr5 37688616 37688703 -161941447 + L3 LINE CR1 928 1015 -562 2500 90 3 0 chr5 37689157 37689469 -161940681 - AluSp SINE Alu 0 313 1 1668 199 0 3 chr5 37689469 37689776 -161940374 - AluSx SINE Alu -6 306 1 659 241 35 35 chr5 37690033 37690315 -161939835 + MER33 DNA MER1_type 1 282 -42 777 199 32 48 chr5 37690791 37690977 -161939173 - AluJo SINE Alu -126 186 4 2370 100 3 0 chr5 37691025 37691336 -161938814 - AluSp SINE Alu -1 312 1 843 154 6 13 chr5 37691403 37691559 -161938591 - L1MB8 LINE L1 -6 6172 6018 2092 49 0 39 chr5 37692914 37693220 -161936930 - AluY SINE Alu -17 294 1 337 287 178 0 chr5 37693440 37693597 -161936553 - MER5A DNA MER1_type -4 185 1 733 173 0 8 chr5 37694298 37694431 -161935719 + FLAM_C SINE Alu 2 133 0 1470 124 151 4 chr5 37694510 37694775 -161935375 + L1PB2 LINE L1 5848 6151 0 315 309 24 8 chr5 37694813 37694936 -161935214 + MIR3 SINE MIR 38 162 -46 1876 118 39 69 chr5 37695452 37695841 -161934309 + L1MA8 LINE L1 5913 6289 -2 25 0 0 0 chr5 37696353 37696378 -161933772 + AT_rich Low_complexity Low_complexity 1 25 0 559 321 25 13 chr5 37698028 37698265 -161931885 - MIR SINE MIR 0 262 23 1877 153 0 7 chr5 37698321 37698616 -161931534 + AluJb SINE Alu 6 298 -14 341 309 51 39 chr5 37698661 37698786 -161931364 + MIR SINE MIR 77 206 -56 2116 111 3 3 chr5 37698786 37699106 -161931044 + AluSp SINE Alu 1 313 0 341 309 51 39 chr5 37699106 37699158 -161930992 + MIR SINE MIR 206 256 -6 2322 103 0 7 chr5 37701180 37701481 -161928669 + AluSx SINE Alu 5 303 -9 862 82 0 0 chr5 37701642 37701752 -161928398 + AluY SINE Alu 195 304 -7 21 57 0 0 chr5 37701807 37701842 -161928308 + AT_rich Low_complexity Low_complexity 1 35 0 2458 151 42 24 chr5 37701987 37702445 -161927705 - MLT1C LTR MaLR -1 466 1 548 305 5 11 chr5 37702678 37702865 -161927285 - MIR SINE MIR -12 250 65 2004 135 0 4 chr5 37704114 37704395 -161925755 - AluSx SINE Alu -32 280 1 302 291 71 44 chr5 37704463 37704645 -161925505 - MLT1J LTR MaLR 0 511 325 1357 155 39 11 chr5 37704650 37704934 -161925216 + MER33 DNA MER1_type 1 292 -32 1724 174 0 44 chr5 37704994 37705311 -161924839 - AluJo SINE Alu -5 307 5 2409 81 7 0 chr5 37705324 37705631 -161924519 - AluY SINE Alu -2 309 1 233 258 108 0 chr5 37705660 37705753 -161924397 - MLT1J LTR MaLR -316 195 93 2280 121 0 0 chr5 37706044 37706350 -161923800 + AluSx SINE Alu 1 306 -6 2531 87 3 0 chr5 37706350 37706662 -161923488 + AluSp SINE Alu 1 313 0 237 322 11 0 chr5 37707115 37707202 -161922948 - L3 LINE CR1 -562 1015 928 439 191 0 17 chr5 37707313 37707428 -161922722 + C-rich Low_complexity Low_complexity 3 115 0 203 329 0 14 chr5 37707428 37707498 -161922652 + MIR SINE MIR 118 186 -76 212 269 45 0 chr5 37707553 37707620 -161922530 + L2 LINE L2 3203 3272 0 239 296 93 19 chr5 37708371 37708479 -161921671 - MIR SINE MIR -34 228 113 1898 172 61 4 chr5 37708487 37708884 -161921266 - MLT1C LTR MaLR 0 467 2 4562 129 63 14 chr5 37710251 37711009 -161919141 + MER4E LTR ERV1 1 768 -11 2128 117 0 7 chr5 37711012 37711311 -161918839 - AluSq SINE Alu -16 297 1 1184 158 20 5 chr5 37711481 37711677 -161918473 + AluSg/x SINE Alu 83 281 -29 2263 105 7 0 chr5 37711909 37712203 -161917947 - AluSp SINE Alu -17 296 1 305 258 139 41 chr5 37712215 37712459 -161917691 + L1ME4a LINE L1 5688 5955 -166 393 174 174 110 chr5 37712767 37712961 -161917189 - MER69 DNA AcHobo 0 2526 1 810 177 16 43 chr5 37713138 37713324 -161916826 + MER5A DNA MER1_type 1 181 -8 264 269 10 19 chr5 37713702 37713806 -161916344 + MIR SINE MIR 104 206 -56 609 206 7 39 chr5 37714038 37714158 -161915992 + MER3 DNA MER1_type 19 134 -28 746 167 8 8 chr5 37714158 37714290 -161915860 - FLAM_A SINE Alu -1 132 1 609 206 7 39 chr5 37714290 37714324 -161915826 + MER3 DNA MER1_type 134 168 -41 1495 186 71 8 chr5 37714328 37714694 -161915456 + MER3 DNA MER1_type 2235 2623 0 2414 101 3 0 chr5 37714836 37715144 -161915006 - AluSp SINE Alu -4 309 1 250 280 106 8 chr5 37716292 37716382 -161913768 + MIR3 SINE MIR 56 164 -44 2268 90 3 3 chr5 37716382 37716672 -161913478 + AluSx SINE Alu 1 290 -22 250 280 106 8 chr5 37716672 37716713 -161913437 + MIR3 SINE MIR 164 200 -8 2447 70 3 0 chr5 37717398 37717698 -161912452 - AluSp SINE Alu -12 301 1 1575 189 50 0 chr5 37718068 37718348 -161911802 + AluJo SINE Alu 11 304 -8 2046 108 4 7 chr5 37718382 37718661 -161911489 + AluSx SINE Alu 21 298 -14 294 287 40 46 chr5 37718812 37718986 -161911164 - MER5B DNA MER1_type -5 173 1 941 186 91 57 chr5 37719294 37719590 -161910560 - MLT1C LTR MaLR 0 467 162 371 264 32 16 chr5 37719775 37719900 -161910250 - MER5A DNA MER1_type -1 188 62 304 267 93 47 chr5 37720047 37720212 -161909938 + MLT1J LTR MaLR 7 179 -332 2086 146 22 32 chr5 37720212 37720324 -161909826 + MLT1A1 LTR MaLR 1 113 -252 1373 134 102 130 chr5 37720324 37720785 -161909365 - LTR7 LTR ERV1 -2 448 1 2086 146 22 32 chr5 37720785 37721041 -161909109 + MLT1A1 LTR MaLR 113 365 0 365 330 74 26 chr5 37721116 37721386 -161908764 + MLT1J LTR MaLR 229 511 0 427 206 152 0 chr5 37721936 37722028 -161908122 + MER103 DNA DNA 12 117 -49 25 0 0 0 chr5 37722065 37722090 -161908060 + AT_rich Low_complexity Low_complexity 1 25 0 230 162 0 0 chr5 37722326 37722363 -161907787 - L1PB3 LINE L1 -107 6047 6011 285 139 0 0 chr5 37722595 37722638 -161907512 - FRAM/FAM SINE Alu -94 72 30 624 234 0 8 chr5 37722773 37722897 -161907253 - FLAM_C SINE Alu -20 123 1 2374 86 7 0 chr5 37722997 37723298 -161906852 - AluSg SINE Alu -7 303 1 2911 153 24 16 chr5 37724140 37724648 -161905502 - MER41E LTR ERV1 0 512 1 256 247 171 73 chr5 37724771 37725046 -161905104 + L2 LINE L2 3012 3313 0 2185 126 0 7 chr5 37725609 37725910 -161904240 - AluSq SINE Alu -14 299 1 195 162 0 0 chr5 37726265 37726302 -161903848 + (TG)n Simple_repeat Simple_repeat 2 38 0 481 250 29 36 chr5 37727847 37728019 -161902131 + MIR SINE MIR 21 188 -62 1328 273 128 11 chr5 37728192 37728724 -161901426 - MLT1G1 LTR MaLR 0 595 2 27 0 0 0 chr5 37729188 37729215 -161900935 + AT_rich Low_complexity Low_complexity 1 27 0 2732 42 0 0 chr5 37729599 37729906 -161900244 - AluY SINE Alu -3 308 2 676 164 16 8 chr5 37730046 37730174 -161899976 - FLAM_A SINE Alu 0 142 14 203 272 22 33 chr5 37730270 37730362 -161899788 + CT-rich Low_complexity Low_complexity 6 96 0 321 242 0 33 chr5 37730467 37730558 -161899592 + L1MC4 LINE L1 6615 6702 -1340 234 228 18 0 chr5 37730560 37730617 -161899533 + (TA)n Simple_repeat Simple_repeat 2 59 0 2039 123 7 10 chr5 37730916 37731209 -161898941 - AluSx SINE Alu -20 292 1 1270 156 72 99 chr5 37731325 37731684 -161898466 + MLT1B LTR MaLR 1 465 -2 1852 115 0 0 chr5 37731764 37732008 -161898142 + AluSx SINE Alu 2 245 -67 1871 102 3 98 chr5 37732013 37732318 -161897832 + AluSq SINE Alu 27 302 -11 282 141 0 0 chr5 37732364 37732418 -161897732 - MLT2B1 LTR ERVL -1 512 354 1845 191 52 10 chr5 37732451 37732822 -161897328 - MLT2D LTR ERVL -41 479 1 2263 107 3 3 chr5 37733215 37733515 -161896635 - AluSx SINE Alu -12 300 1 2175 115 14 0 chr5 37734883 37735178 -161894972 + AluSq SINE Alu 1 299 -14 685 142 0 35 chr5 37735294 37735407 -161894743 + AluJo SINE Alu 2 110 -202 2028 143 143 11 chr5 37735410 37735788 -161894362 - MSTA LTR MaLR 0 428 1 2255 124 22 9 chr5 37735804 37736126 -161894024 + THE1B LTR MaLR 39 364 0 10145 100 87 4 chr5 37736126 37737584 -161892566 + THE1B-int LTR MaLR 1 1579 -1 2419 109 28 11 chr5 37737585 37737943 -161892207 + THE1B LTR MaLR 1 364 0 881 131 80 62 chr5 37737943 37738119 -161892031 + AluJo SINE Alu 108 286 -26 334 264 18 27 chr5 37738134 37738244 -161891906 + L1MC5 LINE L1 7711 7819 -142 1599 159 64 0 chr5 37738283 37738547 -161891603 + AluJb SINE Alu 1 281 -31 27 62 0 0 chr5 37738615 37738663 -161891487 + AT_rich Low_complexity Low_complexity 1 48 0 1562 241 52 47 chr5 37738703 37739322 -161890828 + L1MC5 LINE L1 7239 7860 -101 1901 160 3 13 chr5 37739590 37739897 -161890253 + AluSx SINE Alu 1 304 -8 2322 112 0 3 chr5 37739900 37740214 -161889936 + AluSq SINE Alu 1 313 0 2087 111 11 0 chr5 37741639 37741918 -161888232 - AluSx SINE Alu -11 301 20 266 134 37 12 chr5 37741946 37742028 -161888122 + (TA)n Simple_repeat Simple_repeat 2 85 0 196 270 230 0 chr5 37742404 37742504 -161887646 + L2 LINE L2 3191 3313 0 2275 98 10 0 chr5 37743858 37744154 -161885996 - AluSg SINE Alu -7 303 5 255 235 35 12 chr5 37745161 37745246 -161884904 - MIR SINE MIR -3 259 173 2213 82 7 7 chr5 37745322 37745614 -161884536 + AluSx SINE Alu 1 292 -20 894 140 0 22 chr5 37745770 37745906 -161884244 - FLAM_C SINE Alu 0 133 1 2156 175 0 3 chr5 37746068 37746399 -161883751 + MER1B DNA MER1_type 1 330 -9 1884 145 20 20 chr5 37746685 37746988 -161883162 + AluJo SINE Alu 6 308 -4 807 148 7 22 chr5 37747346 37747481 -161882669 + FLAM_C SINE Alu 1 133 0 874 228 75 47 chr5 37748337 37748591 -161881559 - MIR SINE MIR 0 262 2 321 248 41 74 chr5 37748890 37748983 -161881167 - L2 LINE L2 0 3272 3182 2153 90 35 10 chr5 37748983 37749273 -161880877 + AluSx SINE Alu 1 297 -15 321 248 41 74 chr5 37749273 37749300 -161880850 - L2 LINE L2 -90 3182 3156 478 212 157 2 chr5 37750470 37750612 -161879538 - MIR SINE MIR -58 150 1 202 264 19 0 chr5 37751164 37751217 -161878933 + L2 LINE L2 3210 3263 -9 219 261 43 29 chr5 37751615 37751684 -161878466 + MER5B DNA MER1_type 92 161 -17 2099 106 3 3 chr5 37751852 37752167 -161877983 - AluSg SINE Alu 0 315 1 1701 223 75 27 chr5 37752340 37752779 -161877371 - MLT1C LTR MaLR -1 466 7 503 236 115 0 chr5 37753785 37753933 -161876217 + MIR SINE MIR 2 166 -96 1678 212 80 30 chr5 37753941 37754379 -161875771 - MLT1C LTR MaLR -2 465 6 2517 70 0 0 chr5 37755309 37755610 -161874540 - AluY SINE Alu -10 301 1 2077 80 0 15 chr5 37755610 37755872 -161874278 - AluSx SINE Alu -16 296 39 2877 73 0 0 chr5 37755979 37756334 -161873816 + THE1A LTR MaLR 1 355 0 443 206 95 0 chr5 37756407 37756533 -161873617 + MIR SINE MIR 85 222 -40 27 0 0 0 chr5 37756903 37756930 -161873220 + AT_rich Low_complexity Low_complexity 1 27 0 286 246 31 54 chr5 37757004 37757134 -161873016 - L2 LINE L2 -23 3249 3123 790 114 8 30 chr5 37757901 37758032 -161872118 + FLAM_C SINE Alu 16 143 0 209 269 224 30 chr5 37759282 37759483 -161870667 - MIR SINE MIR -3 259 20 231 267 27 27 chr5 37759582 37759657 -161870493 + Charlie4 DNA MER1_type 1883 1957 -4 2367 86 7 0 chr5 37760055 37760357 -161869793 - AluSp SINE Alu -9 304 1 2042 77 70 18 chr5 37760361 37760647 -161869503 - AluSq SINE Alu -10 303 3 578 319 21 7 chr5 37760680 37760959 -161869191 - L1ME3A LINE L1 -208 5962 5680 305 290 65 26 chr5 37761132 37761287 -161868863 - MER5A DNA MER1_type 0 189 29 253 345 42 0 chr5 37761333 37761475 -161868675 + L3b LINE CR1 1117 1264 -319 423 0 0 0 chr5 37761902 37761910 -161868240 + (TG)n Simple_repeat Simple_repeat 1 55 0 423 0 0 0 chr5 37761910 37761957 -161868193 + (TG)n Simple_repeat Simple_repeat 2 48 0 1088 151 0 0 chr5 37761978 37762137 -161868013 - AluSg/x SINE Alu -16 294 136 272 266 115 0 chr5 37762140 37762253 -161867897 + MER112 DNA MER1_type 39 164 -96 2237 98 3 19 chr5 37762702 37762840 -161867310 + AluSq SINE Alu 1 140 -173 2335 107 0 0 chr5 37762840 37763138 -161867012 + AluSc SINE Alu 1 298 -11 2237 98 3 19 chr5 37763138 37763306 -161866844 + AluSq SINE Alu 140 302 -11 641 160 76 8 chr5 37763613 37763732 -161866418 - FLAM_C SINE Alu -4 129 3 465 120 53 0 chr5 37764651 37764726 -161865424 - MER3 DNA MER1_type -73 136 58 * 886 184 34 63 chr5 37764717 37764924 -161865226 - MER20 DNA MER1_type -18 201 1 311 219 37 12 chr5 37764924 37764990 -161865160 - MER3 DNA MER1_type -130 79 12 265 214 41 92 chr5 37765080 37765178 -161864972 - MIR SINE MIR -131 131 39 398 195 228 34 chr5 37767351 37767500 -161862650 + MIR SINE MIR 21 198 -64 406 123 0 0 chr5 37767503 37767560 -161862590 - LTR16C LTR ERVL -5 486 430 715 181 9 0 chr5 37767799 37767915 -161862235 - FLAM_A SINE Alu -16 117 1 1002 219 17 0 chr5 37767916 37768094 -161862056 + MER58A DNA MER1_type 42 222 -2 368 259 0 0 chr5 37768105 37768186 -161861964 - LTR16C LTR ERVL -219 272 192 2161 130 0 3 chr5 37768187 37768486 -161861664 + AluSx SINE Alu 1 298 -14 3645 113 43 0 chr5 37768536 37769042 -161861108 + MER1A DNA MER1_type 2 529 0 467 129 47 12 chr5 37769211 37769296 -161860854 - AluSc SINE Alu -8 301 214 2032 78 0 0 chr5 37769296 37769538 -161860612 - AluSc SINE Alu -50 259 18 283 222 7 68 chr5 37769545 37769648 -161860502 - MER5B DNA MER1_type -45 133 45 1743 174 17 26 chr5 37769933 37770283 -161859867 - L1MB5 LINE L1 -8 6166 5820 1284 170 146 0 chr5 37770412 37770563 -161859587 - AluJb SINE Alu -19 283 155 228 35 0 0 chr5 37770563 37770592 -161859558 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1284 170 146 0 chr5 37770592 37770687 -161859463 - AluJb SINE Alu -147 155 1 684 200 8 8 chr5 37771003 37771133 -161859017 - FLAM_A SINE Alu 0 133 4 426 69 0 0 chr5 37772129 37772187 -161857963 + (TG)n Simple_repeat Simple_repeat 2 59 0 1994 111 36 4 chr5 37773071 37773350 -161856800 - AluSq SINE Alu -24 289 2 529 205 96 24 chr5 37773456 37773622 -161856528 - MER5B DNA MER1_type 0 178 1 234 0 0 0 chr5 37773742 37773768 -161856382 + (TC)n Simple_repeat Simple_repeat 1 26 0 2530 107 6 8 chr5 37774044 37774400 -161855750 + THE1A LTR MaLR 1 355 0 11615 97 8 9 chr5 37774400 37775983 -161854167 + THE1A-int LTR MaLR 1 1580 0 2394 118 8 8 chr5 37775983 37776338 -161853812 + THE1A LTR MaLR 1 355 0 358 295 9 9 chr5 37776479 37776591 -161853559 - LTR33A LTR ERVL -402 121 10 228 122 0 0 chr5 37776778 37776819 -161853331 + (CCA)n Simple_repeat Simple_repeat 2 42 0 1966 125 3 19 chr5 37777078 37777390 -161852760 + THE1-int LTR MaLR 929 1235 -345 556 125 0 0 chr5 37777388 37777468 -161852682 - THE1-int LTR MaLR -572 1008 929 * 182 298 0 0 chr5 37777766 37777823 -161852327 - L2 LINE L2 -61 3252 3196 2165 126 0 0 chr5 37777912 37778205 -161851945 + AluSx SINE Alu 3 295 -17 217 314 141 13 chr5 37778782 37778938 -161851212 - MIR3 SINE MIR -5 203 28 1922 138 7 10 chr5 37778943 37779232 -161850918 - AluSx SINE Alu -24 288 1 395 283 139 0 chr5 37779258 37779424 -161850726 - MER5A DNA MER1_type 0 189 1 482 295 108 0 chr5 37779782 37780007 -161850143 - L2 LINE L2 -292 3021 2774 31 76 0 0 chr5 37780007 37780073 -161850077 + AT_rich Low_complexity Low_complexity 1 66 0 301 266 18 28 chr5 37780339 37780448 -161849702 + MIR3 SINE MIR 86 193 -15 1928 141 0 38 chr5 37781101 37781414 -161848736 - AluJb SINE Alu -9 303 3 569 201 41 52 chr5 37781452 37781542 -161848608 + MIR SINE MIR 8 97 -165 552 114 13 0 chr5 37781542 37781621 -161848529 + MADE1 DNA Mariner 1 80 0 569 201 41 52 chr5 37781621 37781724 -161848426 + MIR SINE MIR 97 199 -63 2715 135 28 6 chr5 37782373 37783120 -161847030 + L1MA4A LINE L1 4900 5665 -638 6059 159 22 25 chr5 37783123 37783276 -161846874 + L1MA3 LINE L1 4126 4278 -1868 1868 137 3 56 chr5 37783276 37783598 -161846552 + AluSx SINE Alu 3 307 -5 6059 159 22 25 chr5 37783598 37784654 -161845496 + L1MA3 LINE L1 4278 5332 -814 755 154 8 0 chr5 37784662 37784779 -161845371 + FLAM_C SINE Alu 9 126 -17 6391 98 19 37 chr5 37784788 37785727 -161844423 + L1MA3 LINE L1 5321 6242 -63 1827 176 0 3 chr5 37785727 37786017 -161844133 + AluJb SINE Alu 1 289 -23 6391 98 19 37 chr5 37786017 37786080 -161844070 + L1MA3 LINE L1 6242 6305 0 1990 142 16 7 chr5 37786090 37786393 -161843757 + AluSx SINE Alu 1 306 -6 2988 130 50 73 chr5 37786393 37786701 -161843449 + L1MA4A LINE L1 5661 5974 -329 2331 111 3 0 chr5 37786701 37787007 -161843143 + AluSx SINE Alu 1 307 -5 2988 130 50 73 chr5 37787007 37787348 -161842802 + L1MA4A LINE L1 5974 6297 -6 348 215 113 44 chr5 37787415 37787567 -161842583 - MER5A DNA MER1_type -1 177 9 584 121 0 0 chr5 37787615 37787698 -161842452 + AluJ/FLAM SINE Alu 2 84 -228 553 133 163 0 chr5 37787840 37787938 -161842212 + FLAM_C SINE Alu 4 117 -16 14549 39 10 9 chr5 37788058 37790586 -161839564 + L1PA5 LINE L1 3623 6154 0 1066 177 16 0 chr5 37790784 37790976 -161839174 + L1M4 LINE L1 5484 5678 -500 3578 92 55 8 chr5 37790977 37791465 -161838685 - MER9 LTR ERVK 0 511 1 10900 107 8 6 chr5 37791474 37793330 -161836820 - HERVK9 LTR ERVK 0 8032 4155 6775 86 3 0 chr5 37793332 37794205 -161835945 - HERVK9 LTR ERVK -2012 3904 3029 * 9332 77 7 0 chr5 37794190 37795378 -161834772 - HERVK9 LTR ERVK -3297 2619 1424 4046 92 10 23 chr5 37795376 37795951 -161834199 - HERVK9 LTR ERVK -5348 568 1 * 3205 123 69 6 chr5 37795951 37796432 -161833718 - MER9 LTR ERVK 0 511 1 2508 189 44 19 chr5 37796433 37796974 -161833176 + L1MB7 LINE L1 5614 6168 -16 1879 159 9 19 chr5 37797118 37797433 -161832717 - AluJb SINE Alu 0 312 1 930 157 18 97 chr5 37797433 37797650 -161832500 - MER20 DNA MER1_type -19 200 1 313 267 155 9 chr5 37797660 37797776 -161832374 + L2 LINE L2 3181 3313 0 2233 115 3 0 chr5 37797902 37798197 -161831953 + AluSx SINE Alu 1 296 -16 203 203 419 0 chr5 37799034 37799108 -161831042 - MIR SINE MIR -118 144 40 219 187 13 27 chr5 37799929 37800004 -161830146 + (TA)n Simple_repeat Simple_repeat 1 74 0 1074 242 168 12 chr5 37800822 37801240 -161828910 - LTR33 LTR ERVL -2 519 37 182 283 50 0 chr5 37801352 37801412 -161828738 + L3b LINE CR1 1431 1493 -90 2447 65 7 3 chr5 37801437 37801747 -161828403 - AluY SINE Alu 0 311 1 475 186 67 129 chr5 37802651 37802844 -161827306 + L1ME3A LINE L1 5988 6168 -2 2262 114 0 16 chr5 37803354 37803661 -161826489 + AluSx SINE Alu 1 302 -10 483 313 26 36 chr5 37803804 37803999 -161826151 - MIR3 SINE MIR -6 202 10 201 288 0 45 chr5 37804012 37804078 -161826072 + MIR SINE MIR 32 94 -168 277 302 78 9 chr5 37804519 37804635 -161825515 + MIR SINE MIR 130 253 -9 307 333 77 19 chr5 37804888 37805044 -161825106 + MIR SINE MIR 23 187 -75 2039 136 3 10 chr5 37805327 37805628 -161824522 + AluSx SINE Alu 1 299 -13 315 49 0 0 chr5 37806034 37806075 -161824075 + (CA)n Simple_repeat Simple_repeat 2 42 0 365 294 17 8 chr5 37806075 37806194 -161823956 - MER5B DNA MER1_type -52 126 7 728 259 128 55 chr5 37806492 37806890 -161823260 - MARNA DNA Mariner -84 502 76 2299 92 0 10 chr5 37807247 37807553 -161822597 - AluSx SINE Alu -9 303 1 432 228 189 43 chr5 37807562 37807843 -161822307 - L1ME4a LINE L1 0 6121 5800 339 44 0 0 chr5 37808696 37808741 -161821409 + (CA)n Simple_repeat Simple_repeat 2 46 0 2441 50 10 3 chr5 37808886 37809186 -161820964 - AluY SINE Alu -9 302 1 2204 84 21 0 chr5 37810661 37810947 -161819203 + AluSx SINE Alu 1 292 -20 1463 169 31 4 chr5 37810988 37811242 -161818908 + AluJo SINE Alu 1 261 -51 981 174 113 15 chr5 37811279 37811474 -161818676 + MER20 DNA MER1_type 1 214 -5 807 11 0 0 chr5 37811478 37811568 -161818582 + 5S rRNA rRNA 1 90 -31 414 293 35 88 chr5 37811765 37812048 -161818102 - L2 LINE L2 -13 3300 3033 1871 147 0 31 chr5 37812467 37812788 -161817362 + AluJb SINE Alu 3 314 0 23 33 0 0 chr5 37812872 37812902 -161817248 + AT_rich Low_complexity Low_complexity 1 30 0 2364 99 0 3 chr5 37814756 37815068 -161815082 + AluSx SINE Alu 1 311 -1 605 290 114 65 chr5 37815123 37816028 -161814122 - L2 LINE L2 -48 3224 2273 762 205 165 5 chr5 37816054 37816254 -161813896 + MIR SINE MIR 15 246 -16 362 291 107 53 chr5 37816294 37816807 -161813343 - L2 LINE L2 -1075 2239 1608 1877 166 94 0 chr5 37817942 37818249 -161811901 - MER1B DNA MER1_type -1 336 1 3666 95 36 16 chr5 37818334 37818838 -161811312 + MER75 DNA T2_type 1 514 0 237 224 15 15 chr5 37818855 37818922 -161811228 - Charlie7 DNA MER1_type -34 2578 2512 291 171 92 0 chr5 37818937 37819013 -161811137 - Charlie7 DNA MER1_type -2470 142 60 2318 72 7 0 chr5 37821583 37821874 -161808276 + AluSp SINE Alu 1 293 -20 26 0 0 0 chr5 37824066 37824092 -161806058 + AT_rich Low_complexity Low_complexity 1 26 0 1969 102 0 42 chr5 37824163 37824299 -161805851 + AluSx SINE Alu 1 120 -192 2379 102 0 0 chr5 37824299 37824604 -161805546 + AluSc SINE Alu 1 305 -4 1969 102 0 42 chr5 37824604 37824751 -161805399 + AluSx SINE Alu 120 272 -40 1912 159 65 3 chr5 37824780 37825133 -161805017 + L1MA8 LINE L1 5917 6291 0 774 176 162 31 chr5 37825264 37825486 -161804664 + L1MD3 LINE L1 7745 7995 0 242 211 0 0 chr5 37825610 37825667 -161804483 - L1ME4a LINE L1 0 6121 6065 2225 94 13 23 chr5 37826187 37826495 -161803655 + AluY SINE Alu 1 305 -6 2289 235 58 20 chr5 37826498 37827164 -161802986 + L1ME1 LINE L1 5449 6299 -35 1069 218 77 2 chr5 37828236 37828586 -161801564 + Charlie4a DNA MER1_type 34 473 -35 890 136 0 0 chr5 37828952 37829102 -161801048 - FLAM_C SINE Alu 0 150 1 1512 132 25 107 chr5 37829497 37829816 -161800334 + AluYb8 SINE Alu 1 293 -25 369 356 59 25 chr5 37830268 37830591 -161799559 - L2 LINE L2 -457 2857 2524 50 92 0 0 chr5 37831280 37831421 -161798729 + AT_rich Low_complexity Low_complexity 1 141 0 291 114 0 0 chr5 37831431 37831475 -161798675 + (TA)n Simple_repeat Simple_repeat 1 44 0 2193 20 0 16 chr5 37831869 37832119 -161798031 - AluY SINE Alu 0 311 66 206 277 15 0 chr5 37832671 37832736 -161797414 + GA-rich Low_complexity Low_complexity 2 67 0 2447 81 0 10 chr5 37833859 37834169 -161795981 + AluSx SINE Alu 1 307 -5 1427 198 55 4 chr5 37834205 37834478 -161795672 + AluJo SINE Alu 2 288 -24 2419 182 51 25 chr5 37836125 37836614 -161793536 - MLT1D LTR MaLR -3 502 1 372 356 153 13 chr5 37836959 37837195 -161792955 - L2 LINE L2 -11 3261 2993 760 317 79 22 chr5 37837334 37837741 -161792409 - L2 LINE L2 -2368 946 517 388 222 28 67 chr5 37838131 37838311 -161791839 - L1ME4a LINE L1 -14 6107 5935 226 208 0 0 chr5 37838300 37838353 -161791797 - L1MC4 LINE L1 -1337 6705 6653 * 273 57 0 0 chr5 37838354 37838389 -161791761 + (CA)n Simple_repeat Simple_repeat 2 36 0 1951 111 0 0 chr5 37838401 37838654 -161791496 - AluSx SINE Alu -26 286 34 1754 168 7 0 chr5 37839199 37839479 -161790671 - AluJb SINE Alu -26 286 5 447 247 96 14 chr5 37842798 37843017 -161787133 - L1MC4 LINE L1 -1916 5892 5656 2390 117 54 20 chr5 37843749 37844100 -161786050 - THE1B LTR MaLR -1 363 1 1795 184 113 76 chr5 37844222 37844707 -161785443 + MLT1D LTR MaLR 3 505 0 253 307 136 34 chr5 37844791 37844879 -161785271 - L2 LINE L2 -32 3240 3144 776 286 78 37 chr5 37844955 37845277 -161784873 + L2 LINE L2 2804 3138 -175 2303 107 10 0 chr5 37845284 37845592 -161784558 - AluSq SINE Alu -2 311 1 497 313 16 0 chr5 37845615 37845743 -161784407 + MER91A DNA MER1_type 49 178 -18 458 318 12 18 chr5 37845777 37845947 -161784203 + L2 LINE L2 3145 3313 0 2223 104 7 3 chr5 37846449 37846746 -161783404 + AluSx SINE Alu 1 298 -14 1783 85 55 27 chr5 37849104 37849397 -161780753 - AluSx SINE Alu -8 304 4 1341 119 30 5 chr5 37850051 37850276 -161779874 + AluSg/x SINE Alu 75 304 0 22 35 0 0 chr5 37850380 37850409 -161779741 + AT_rich Low_complexity Low_complexity 1 29 0 878 237 76 0 chr5 37850509 37850720 -161779430 - MIR SINE MIR -8 254 28 1985 151 10 0 chr5 37850721 37851025 -161779125 - AluJb SINE Alu -3 309 3 1257 183 28 0 chr5 37851056 37851269 -161778881 - MER20 DNA MER1_type 0 219 1 1305 167 139 0 chr5 37851277 37851558 -161778592 - MER33 DNA MER1_type 0 324 5 2332 178 23 16 chr5 37851629 37852057 -161778093 - LTR3 LTR ERVK 0 432 2 1623 138 73 4 chr5 37852057 37852318 -161777832 - AluSx SINE Alu -33 279 1 303 154 39 0 chr5 37852888 37852940 -161777210 - MER66B LTR ERV1 -141 345 292 198 231 154 77 chr5 37853027 37853170 -161776980 - L2 LINE L2 0 3313 3160 246 265 48 24 chr5 37853269 37853352 -161776798 - L2 LINE L2 -220 3052 2968 313 111 0 0 chr5 37853603 37853648 -161776502 - LTR12 LTR ERV1 -318 396 352 198 0 0 0 chr5 37853650 37853672 -161776478 + (A)n Simple_repeat Simple_repeat 1 22 0 196 325 38 12 chr5 37854219 37854299 -161775851 - MIR3 SINE MIR -15 193 112 467 286 170 6 chr5 37854311 37854482 -161775668 - MIR SINE MIR -2 260 62 1444 197 48 7 chr5 37855125 37855414 -161774736 + AluJb SINE Alu 1 301 -11 2467 81 0 7 chr5 37855488 37855798 -161774352 + AluSx SINE Alu 1 308 -4 402 21 0 0 chr5 37855798 37855872 -161774278 + (TG)n Simple_repeat Simple_repeat 1 121 0 402 21 0 0 chr5 37855872 37855919 -161774231 + (TG)n Simple_repeat Simple_repeat 2 48 0 483 135 0 0 chr5 37856622 37856696 -161773454 + L1MA10 LINE L1 6254 6327 -7 279 316 71 65 chr5 37857242 37857410 -161772740 - MIR SINE MIR -79 183 15 990 277 87 27 chr5 37857587 37858149 -161772001 - L2 LINE L2 -4 3309 2698 1676 230 40 44 chr5 37858153 37858749 -161771401 + L1MC5 LINE L1 6923 7516 -445 517 214 125 36 chr5 37858808 37859056 -161771094 + L1MC5 LINE L1 7644 7913 -48 579 288 64 17 chr5 37859067 37859303 -161770847 - L2 LINE L2 -611 2703 2457 405 213 197 16 chr5 37859700 37859827 -161770323 - MIR SINE MIR 0 262 113 273 325 147 45 chr5 37860984 37861249 -161768901 - L2 LINE L2 0 3272 2981 915 154 0 0 chr5 37861266 37861396 -161768754 - FLAM_C SINE Alu -3 130 1 2631 122 8 3 chr5 37861953 37862315 -161767835 - THE1B LTR MaLR 0 364 1 2141 108 4 0 chr5 37862460 37862738 -161767412 + AluSx SINE Alu 1 279 -33 918 261 139 14 chr5 37864610 37865111 -161765039 + L1MC4a LINE L1 5598 6189 -1619 510 189 71 77 chr5 37865282 37865451 -161764699 - MER46A DNA MER2_type -65 171 4 * 1028 150 24 12 chr5 37865308 37865475 -161764675 + MER46A DNA MER2_type 1 169 -67 1574 106 10 0 chr5 37865575 37865783 -161764367 + AluSc SINE Alu 80 289 -20 343 302 71 8 chr5 37866154 37866280 -161763870 - MER5A DNA MER1_type -1 188 55 225 281 45 34 chr5 37866287 37866376 -161763774 - MER5A DNA MER1_type -97 92 3 537 32 0 0 chr5 37866623 37866685 -161763465 + AluY SINE Alu 3 64 -247 520 108 0 0 chr5 37866785 37866859 -161763291 - AluSc SINE Alu -201 108 35 2201 122 10 0 chr5 37866920 37867223 -161762927 + AluJb SINE Alu 1 306 -6 308 325 88 9 chr5 37867383 37867497 -161762653 - MIR SINE MIR -118 144 22 543 228 69 73 chr5 37867519 37867538 -161762612 + MIR SINE MIR 22 40 -222 593 219 50 8 chr5 37867538 37867657 -161762493 - FLAM_A SINE Alu -8 125 2 543 228 69 73 chr5 37867657 37867870 -161762280 + MIR SINE MIR 40 253 -9 721 274 51 8 chr5 37867991 37868225 -161761925 + MIR SINE MIR 12 255 -7 184 333 134 18 chr5 37869259 37869430 -161760720 - L2 LINE L2 -1339 1975 1785 481 295 104 33 chr5 37870133 37870374 -161759776 - MIR SINE MIR 0 262 5 374 206 82 10 chr5 37871151 37871248 -161758902 - Charlie7 DNA MER1_type -2504 108 5 1045 205 186 53 chr5 37871916 37872238 -161757912 + MLT1A1 LTR MaLR 1 365 0 1422 102 0 0 chr5 37872301 37872488 -161757662 - AluY SINE Alu 0 311 125 1480 162 4 4 chr5 37874083 37874318 -161755832 - MLT1A1 LTR MaLR -119 246 12 337 374 8 0 chr5 37874626 37874749 -161755401 - MER5A DNA MER1_type -3 186 63 222 118 0 0 chr5 37875644 37875678 -161754472 + (CATA)n Simple_repeat Simple_repeat 2 35 0 180 0 0 0 chr5 37875904 37875924 -161754226 + (T)n Simple_repeat Simple_repeat 1 20 0 631 290 11 11 chr5 37876098 37876281 -161753869 - MIR SINE MIR -60 202 20 1084 231 61 95 chr5 37876294 37876524 -161753626 - L1MC4 LINE L1 0 8042 7806 1450 189 63 14 chr5 37876524 37876685 -161753465 - AluJb SINE Alu -13 299 116 189 0 0 0 chr5 37876685 37876706 -161753444 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1450 189 63 14 chr5 37876706 37876829 -161753321 - AluJb SINE Alu -196 116 1 1084 231 61 95 chr5 37876829 37877122 -161753028 - L1MC4 LINE L1 -236 7806 7537 6030 162 46 18 chr5 37877529 37877729 -161752421 - L1 LINE L1 -1679 4467 4274 306 50 0 0 chr5 37877729 37877769 -161752381 + (TG)n Simple_repeat Simple_repeat 1 40 0 6030 162 46 18 chr5 37877769 37878764 -161751386 - L1 LINE L1 -1872 4274 3239 1865 151 16 16 chr5 37879218 37879530 -161750620 - AluJb SINE Alu 0 312 1 369 0 0 0 chr5 37879628 37879669 -161750481 + (TG)n Simple_repeat Simple_repeat 2 42 0 544 237 34 8 chr5 37879807 37879925 -161750225 - L2 LINE L2 -5 3308 3188 1984 104 49 3 chr5 37880234 37880521 -161749629 + AluSq SINE Alu 1 300 -13 2193 100 14 0 chr5 37881354 37881643 -161748507 + AluSx SINE Alu 5 297 -15 482 266 6 57 chr5 37882853 37883011 -161747139 - MER5A DNA MER1_type -22 167 18 198 0 0 0 chr5 37883602 37883624 -161746526 + (TGG)n Simple_repeat Simple_repeat 2 23 0 641 234 63 0 chr5 37883666 37883824 -161746326 - MER5B DNA MER1_type -10 168 1 476 251 64 61 chr5 37884936 37885116 -161745034 - MIR SINE MIR -48 214 31 182 313 31 0 chr5 37885775 37885839 -161744311 - L2 LINE L2 -1 3312 3247 335 241 13 13 chr5 37885854 37885933 -161744217 - MIR SINE MIR -28 234 156 684 230 118 6 chr5 37885933 37886094 -161744056 - AluJo SINE Alu -13 299 121 273 269 54 46 chr5 37886350 37886480 -161743670 - L1ME4a LINE L1 -1 6120 5990 346 270 95 14 chr5 37886520 37886668 -161743482 - L1ME4a LINE L1 -205 5916 5757 707 251 31 36 chr5 37888277 37888472 -161741678 - MIR SINE MIR -61 201 8 413 239 0 72 chr5 37888649 37888787 -161741363 - MIR SINE MIR -1 261 134 621 231 82 14 chr5 37888878 37889088 -161741062 - MIR SINE MIR -1 261 32 28 71 0 0 chr5 37890347 37890403 -161739747 + AT_rich Low_complexity Low_complexity 1 56 0 4039 201 96 54 chr5 37890638 37890964 -161739186 + L1ME3A LINE L1 3435 3746 -2400 234 250 0 0 chr5 37890964 37891008 -161739142 - 5S rRNA rRNA -77 44 1 4039 201 96 54 chr5 37891008 37892227 -161737923 + L1ME3A LINE L1 3746 5050 -1096 1181 200 4 39 chr5 37892269 37892524 -161737626 + AluJo SINE Alu 43 288 -24 27 0 0 0 chr5 37892757 37892784 -161737366 + AT_rich Low_complexity Low_complexity 1 27 0 375 275 91 96 chr5 37892837 37893012 -161737138 + L1ME3A LINE L1 5638 5814 -356 2247 104 0 0 chr5 37893012 37893319 -161736831 + AluSx SINE Alu 1 307 -5 375 275 91 96 chr5 37893319 37893442 -161736708 + L1ME3A LINE L1 5814 5936 -234 269 242 33 22 chr5 37894063 37894154 -161735996 + L1M4 LINE L1 784 875 -5667 1060 177 100 9 chr5 37894216 37894436 -161735714 + L1MCa LINE L1 17 256 -6170 8472 196 55 69 chr5 37894438 37894808 -161735342 + L1MCa LINE L1 1800 2174 -4252 957 206 0 0 chr5 37894808 37894973 -161735177 + FRAM SINE Alu 1 165 -1 8472 196 55 69 chr5 37894973 37895505 -161734645 + L1MCa LINE L1 2174 2712 -3714 3185 79 56 7 chr5 37895505 37895937 -161734213 - MLT2A2 LTR ERVL 0 453 1 8472 196 55 69 chr5 37895937 37897013 -161733137 + L1MCa LINE L1 2712 3801 -2625 1607 79 5 0 chr5 37897013 37897227 -161732923 + L1PA7 LINE L1 5936 6150 -4 8472 196 55 69 chr5 37897227 37897642 -161732508 + L1MCa LINE L1 3801 4220 -2206 2300 109 0 0 chr5 37897642 37897955 -161732195 - AluSq SINE Alu 0 313 1 8472 196 55 69 chr5 37897955 37898451 -161731699 + L1MCa LINE L1 4220 4721 -1705 754 197 8 0 chr5 37898451 37898583 -161731567 + FLAM_A SINE Alu 1 133 0 8472 196 55 69 chr5 37898583 37898864 -161731286 + L1MCa LINE L1 4721 5054 -1372 3764 156 31 9 chr5 37898864 37899565 -161730585 + L1PB4 LINE L1 5437 6153 -3 2077 104 0 0 chr5 37899947 37900227 -161729923 + AluSc SINE Alu 1 280 -29 430 223 128 38 chr5 37900327 37900538 -161729612 - LTR30 LTR ERV1 -256 466 237 1749 198 17 83 chr5 37900736 37901205 -161728945 - MER57-int LTR ERV1 -1716 5821 5384 355 140 0 0 chr5 37901205 37901255 -161728895 + AluJ/FRAM SINE Alu 233 282 -20 234 167 0 0 chr5 37901223 37901259 -161728891 + Alu SINE Alu 84 119 -14 * 1837 138 0 10 chr5 37902198 37902487 -161727663 + AluJo SINE Alu 9 294 -18 1444 169 0 37 chr5 37902869 37903142 -161727008 - AluJo SINE Alu -22 290 28 185 0 40 0 chr5 37903232 37903257 -161726893 + (TTG)n Simple_repeat Simple_repeat 2 27 0 444 85 0 0 chr5 37903699 37903758 -161726392 + AluSg SINE Alu 2 60 -252 2221 106 0 0 chr5 37903830 37904133 -161726017 + AluSq SINE Alu 1 303 -10 1726 114 0 0 chr5 37904321 37904566 -161725584 + AluSg SINE Alu 62 306 -4 726 213 54 58 chr5 37904640 37904794 -161725356 - L2 LINE L2 -3 3310 3156 1609 138 66 14 chr5 37904794 37905083 -161725067 + AluJo SINE Alu 1 304 -8 726 213 54 58 chr5 37905083 37905168 -161724982 - L2 LINE L2 -157 3156 3072 1669 128 38 7 chr5 37905168 37905360 -161724790 - AluSq SINE Alu -14 299 114 1579 109 0 4 chr5 37905360 37905590 -161724560 - AluSg/x SINE Alu -3 309 81 1669 128 38 7 chr5 37905590 37905602 -161724548 - AluSq SINE Alu -199 114 104 3667 196 30 49 chr5 37905602 37906576 -161723574 - LTR5 LTR ERVK -14 955 1 1669 128 38 7 chr5 37906576 37906660 -161723490 - AluSq SINE Alu -209 104 1 1945 128 7 0 chr5 37907931 37908220 -161721930 + AluSq SINE Alu 1 291 -22 909 147 40 17 chr5 37908238 37908415 -161721735 + AluSx SINE Alu 1 181 -131 326 162 40 27 chr5 37908415 37908489 -161721661 + AluY SINE Alu 46 120 -181 1135 149 82 85 chr5 37908675 37908785 -161721365 + AluJo SINE Alu 19 128 -184 2030 117 3 10 chr5 37908785 37909083 -161721067 + AluSq SINE Alu 1 296 -17 1135 149 82 85 chr5 37909083 37909254 -161720896 + AluJo SINE Alu 128 299 -13 347 251 182 5 chr5 37909584 37909771 -161720379 + L1M4 LINE L1 4080 4299 -1847 224 226 16 0 chr5 37909771 37909833 -161720317 + (CA)n Simple_repeat Simple_repeat 2 64 0 2087 105 7 3 chr5 37909841 37910136 -161720014 - AluSx SINE Alu -16 296 1 1452 158 34 47 chr5 37910585 37910883 -161719267 - AluJb SINE Alu -10 302 9 1192 215 134 51 chr5 37910928 37911186 -161718964 + L1M4 LINE L1 4385 4620 -1526 2269 99 0 0 chr5 37911186 37911490 -161718660 + AluSx SINE Alu 1 304 -8 1192 215 134 51 chr5 37911490 37911546 -161718604 + L1M4 LINE L1 4620 4670 -1476 2606 36 0 0 chr5 37911546 37911851 -161718299 + AluY SINE Alu 1 305 -6 1192 215 134 51 chr5 37911851 37912148 -161718002 + L1M4 LINE L1 4670 5048 -1098 1078 191 106 0 chr5 37912252 37912488 -161717662 + MER57A LTR ERV1 142 402 -1 323 307 155 28 chr5 37912517 37912859 -161717291 + L2 LINE L2 2707 3091 -181 241 254 34 0 chr5 37912917 37912976 -161717174 - MIR SINE MIR -19 243 183 376 315 18 67 chr5 37912988 37913153 -161716997 + L2 LINE L2 3116 3272 0 213 263 158 0 chr5 37913242 37913318 -161716832 + MIR SINE MIR 162 249 -13 2067 137 0 9 chr5 37913971 37914286 -161715864 + AluSx SINE Alu 1 312 0 200 214 24 0 chr5 37914468 37914510 -161715640 + (CA)n Simple_repeat Simple_repeat 1 43 0 204 265 30 90 chr5 37914585 37914694 -161715456 - L2 LINE L2 -12 3301 3204 180 77 0 0 chr5 37914694 37914720 -161715430 + (CAAT)n Simple_repeat Simple_repeat 3 28 0 204 265 30 90 chr5 37914720 37914776 -161715374 - L2 LINE L2 -109 3204 3146 455 283 17 11 chr5 37914856 37915033 -161715117 + (TGAA)n Simple_repeat Simple_repeat 3 180 0 237 119 0 0 chr5 37915097 37915139 -161715011 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 1261 216 0 8 chr5 37915339 37915594 -161714556 + L1PB4 LINE L1 5892 6144 -12 1790 89 0 0 chr5 37915595 37915831 -161714319 + AluY SINE Alu 60 295 -16 213 292 0 26 chr5 37916347 37916460 -161713690 + CT-rich Low_complexity Low_complexity 1 110 0 310 377 0 22 chr5 37916525 37916708 -161713442 + CT-rich Low_complexity Low_complexity 2 180 0 * 345 343 0 23 chr5 37916597 37916769 -161713381 + C-rich Low_complexity Low_complexity 1 168 0 457 286 15 23 chr5 37917228 37917361 -161712789 + MER57-int LTR ERV1 5825 5956 -1581 1058 247 13 0 chr5 37917442 37917673 -161712477 + MER57-int LTR ERV1 5966 6199 -1338 755 154 0 0 chr5 37918233 37918343 -161711807 + FLAM_C SINE Alu 2 111 -32 212 59 29 0 chr5 37918349 37918383 -161711767 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 1877 115 51 90 chr5 37919223 37919406 -161710744 + THE1C LTR MaLR 1 163 -212 189 0 0 0 chr5 37919406 37919427 -161710723 + (TC)n Simple_repeat Simple_repeat 1 21 0 1877 115 51 90 chr5 37919427 37919633 -161710517 + THE1C LTR MaLR 163 375 0 918 275 21 74 chr5 37919846 37919981 -161710169 + MER57-int LTR ERV1 6794 6935 -602 1992 113 3 13 chr5 37919981 37920282 -161709868 + AluJb SINE Alu 1 298 -14 918 275 21 74 chr5 37920282 37920524 -161709626 + MER57-int LTR ERV1 6935 7151 -386 255 220 0 0 chr5 37920529 37920579 -161709571 + MER57A LTR ERV1 42 91 -312 2138 119 0 0 chr5 37920593 37920903 -161709247 - AluSx SINE Alu -2 310 1 996 110 0 0 chr5 37920903 37921039 -161709111 - AluSq/x SINE Alu -177 136 1 26 0 0 0 chr5 37921110 37921136 -161709014 + AT_rich Low_complexity Low_complexity 1 26 0 336 250 145 40 chr5 37923072 37923196 -161706954 + MIR SINE MIR 114 250 -12 579 272 179 37 chr5 37923224 37923850 -161706300 - L2 LINE L2 0 3313 2602 1517 252 155 31 chr5 37923890 37924082 -161706068 - L1ME3A LINE L1 -3 6167 6000 2107 111 0 3 chr5 37924082 37924380 -161705770 - AluSg SINE Alu -13 297 1 1517 252 155 31 chr5 37924380 37924730 -161705420 - L1ME3A LINE L1 -170 6000 5558 669 152 9 0 chr5 37924730 37924835 -161705315 - Tigger7 DNA MER2_type 0 2487 2382 1196 216 5 0 chr5 37924848 37925056 -161705094 - Tigger7 DNA MER2_type -503 230 22 2452 74 0 0 chr5 37925057 37925367 -161704783 + AluY SINE Alu 1 310 -1 1489 77 0 15 chr5 37925496 37925691 -161704459 - MER107 DNA MER1_type -1 196 5 201 245 11 96 chr5 37925736 37925830 -161704320 + L3b LINE CR1 1208 1293 -290 342 224 46 40 chr5 37926391 37926543 -161703607 + (CAGAGA)n Simple_repeat Simple_repeat 2 154 0 1119 174 0 14 chr5 37926578 37926856 -161703294 + AluJo SINE Alu 1 310 0 335 325 6 6 chr5 37927285 37927364 -161702786 + GA-rich Low_complexity Low_complexity 2 80 -90 1995 132 7 0 chr5 37927364 37927667 -161702483 + AluSx SINE Alu 1 305 -7 335 325 6 6 chr5 37927667 37927756 -161702394 + GA-rich Low_complexity Low_complexity 79 170 0 1509 149 37 34 chr5 37928001 37928296 -161701854 - AluJo SINE Alu -12 300 5 559 297 55 34 chr5 37928401 37928614 -161701536 + MIR SINE MIR 5 211 -51 364 305 6 11 chr5 37929080 37929257 -161700893 + GA-rich Low_complexity Low_complexity 1 176 0 1191 105 0 6 chr5 37929305 37929477 -161700673 - AluSc SINE Alu -7 302 132 2243 102 0 7 chr5 37929479 37929783 -161700367 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 37929909 37929933 -161700217 + AT_rich Low_complexity Low_complexity 1 24 0 1331 146 0 9 chr5 37930074 37930293 -161699857 - AluSg/x SINE Alu -13 299 83 279 353 20 33 chr5 37930305 37930458 -161699692 - MER5A DNA MER1_type -5 184 34 306 238 12 0 chr5 37930475 37930555 -161699595 + L1ME4a LINE L1 5961 6041 -80 378 184 94 0 chr5 37930810 37930899 -161699251 - FLAM_A SINE Alu -5 128 43 2065 109 3 31 chr5 37930914 37931234 -161698916 - AluSx SINE Alu 0 312 2 276 30 0 0 chr5 37931249 37931282 -161698868 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 1955 98 14 0 chr5 37931282 37931558 -161698592 - AluSx SINE Alu -32 280 1 2407 67 0 0 chr5 37932047 37932347 -161697803 - AluY SINE Alu -11 300 1 532 163 0 0 chr5 37932474 37932554 -161697596 - AluJb SINE Alu -187 125 46 492 18 0 0 chr5 37932689 37932741 -161697409 + (TTTA)n Simple_repeat Simple_repeat 1 109 0 492 18 0 0 chr5 37932741 37932798 -161697352 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 1571 119 34 72 chr5 37932800 37933093 -161697057 - AluSx SINE Alu -30 282 1 847 165 0 0 chr5 37933250 37933383 -161696767 - FLAM_C SINE Alu 0 133 1 828 201 52 44 chr5 37934254 37934268 -161695882 - MIR SINE MIR -22 240 228 436 97 0 86 chr5 37934268 37934315 -161695835 - L1PA11 LINE L1 -4 6170 6133 2403 71 3 3 chr5 37934315 37934625 -161695525 - AluSp SINE Alu -3 310 1 436 97 0 86 chr5 37934625 37934670 -161695480 - L1PA11 LINE L1 -41 6133 6086 828 201 52 44 chr5 37934670 37934884 -161695266 - MIR SINE MIR -34 228 10 401 265 88 24 chr5 37934886 37935056 -161695094 + L2 LINE L2 2775 2955 -359 183 80 0 0 chr5 37936551 37936576 -161693574 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 239 246 115 0 chr5 37936852 37936913 -161693237 - MIR SINE MIR -118 144 77 257 105 0 0 chr5 37937258 37937296 -161692854 + Alu SINE Alu 257 294 -8 31 44 0 0 chr5 37937308 37937353 -161692797 + AT_rich Low_complexity Low_complexity 1 45 0 800 220 70 15 chr5 37937596 37937796 -161692354 + MIR SINE MIR 28 238 -24 410 205 179 70 chr5 37937812 37937869 -161692281 - MIR SINE MIR -54 208 159 1766 153 10 0 chr5 37937869 37938164 -161691986 - AluJo SINE Alu -14 298 1 410 205 179 70 chr5 37938164 37938262 -161691888 - MIR SINE MIR -103 159 36 680 153 8 6 chr5 37939110 37939373 -161690777 + AluJ SINE Alu 1 312 0 2258 83 0 3 chr5 37939597 37939899 -161690251 - AluY SINE Alu -1 310 10 1443 162 23 50 chr5 37939917 37940220 -161689930 - AluJo SINE Alu -17 295 1 517 181 60 26 chr5 37940229 37940345 -161689805 - MIR SINE MIR -111 151 32 1504 139 10 68 chr5 37940374 37940555 -161689595 - AluJb SINE Alu -5 307 148 2075 110 0 29 chr5 37940555 37940863 -161689287 - AluSx SINE Alu -13 299 1 1504 139 10 68 chr5 37940863 37940975 -161689175 - AluJb SINE Alu -164 148 31 2126 108 0 40 chr5 37941243 37941568 -161688582 - AluSx SINE Alu 0 312 1 182 91 30 0 chr5 37941982 37942015 -161688135 + GA-rich Low_complexity Low_complexity 1 34 0 185 194 0 48 chr5 37942253 37942315 -161687835 + GA-rich Low_complexity Low_complexity 2 60 0 1602 140 0 0 chr5 37942346 37942574 -161687576 + AluJb SINE Alu 47 274 -38 211 120 20 40 chr5 37942579 37942629 -161687521 + GA-rich Low_complexity Low_complexity 3 51 0 655 194 31 0 chr5 37942635 37942764 -161687386 + FLAM_A SINE Alu 1 133 0 553 200 50 17 chr5 37942796 37942916 -161687234 - L2 LINE L2 -3 3310 3187 202 279 39 19 chr5 37943241 37943345 -161686805 + (CAGAGA)n Simple_repeat Simple_repeat 4 109 0 199 140 40 0 chr5 37943346 37943396 -161686754 + GA-rich Low_complexity Low_complexity 1 52 0 1897 167 0 3 chr5 37943430 37943724 -161686426 + AluJo SINE Alu 1 293 -19 592 238 97 7 chr5 37944013 37944208 -161685942 + MER57A LTR ERV1 206 403 0 2170 121 7 0 chr5 37945139 37945429 -161684721 + AluSx SINE Alu 1 292 -20 4304 179 32 53 chr5 37945613 37946589 -161683561 + LTR5 LTR ERVK 1 955 -14 454 246 98 16 chr5 37947823 37947945 -161682205 - MIR SINE MIR -50 212 81 304 183 56 56 chr5 37947955 37948026 -161682124 + MER33 DNA MER1_type 1 71 -253 1339 145 85 0 chr5 37948027 37948275 -161681875 + L1PB4 LINE L1 5710 5978 -178 852 258 9 13 chr5 37948273 37948506 -161681644 - L1M4 LINE L1 -2012 4134 3903 * 3261 97 15 28 chr5 37948508 37949560 -161680590 - MER11A LTR ERVK 0 1266 139 1215 20 0 20 chr5 37949877 37950024 -161680126 - L1PA5 LINE L1 -4 6150 6007 3853 36 2 0 chr5 37950024 37950497 -161679653 - L1PA5 LINE L1 -359 5795 5322 1342 38 0 0 chr5 37950497 37950657 -161679493 - L1PA4 LINE L1 -6 6149 5990 1298 38 0 0 chr5 37950657 37950817 -161679333 + L1PA4 LINE L1 5820 5979 -176 * 4494 73 9 3 chr5 37950807 37951453 -161678697 - L1PA5 LINE L1 -815 5331 4682 612 116 4 128 chr5 37951581 37951823 -161678327 + LTR15 LTR ERV1 230 441 -52 295 95 0 143 chr5 37951896 37952001 -161678149 + AluJo SINE Alu 50 139 -163 1192 141 0 35 chr5 37952213 37952411 -161677739 + AluSx SINE Alu 1 191 -121 914 74 99 0 chr5 37952633 37952754 -161677396 + AluSq/x SINE Alu 1 133 -179 1413 151 72 82 chr5 37952759 37952889 -161677261 + AluJo SINE Alu 1 131 -181 2073 121 3 13 chr5 37952889 37953187 -161676963 + AluSq SINE Alu 1 295 -18 1413 151 72 82 chr5 37953187 37953361 -161676789 + AluJo SINE Alu 131 302 -10 240 210 16 0 chr5 37953875 37953937 -161676213 + (CA)n Simple_repeat Simple_repeat 2 64 0 2265 98 7 3 chr5 37953945 37954240 -161675910 - AluSx SINE Alu -16 296 1 1639 159 32 45 chr5 37954686 37954995 -161675155 - AluJb SINE Alu -7 305 1 1590 225 112 36 chr5 37955032 37955296 -161674854 + L1M4 LINE L1 4385 4628 -1518 2248 115 0 0 chr5 37955296 37955592 -161674558 + AluSx SINE Alu 1 296 -16 1590 225 112 36 chr5 37955592 37955990 -161674160 + L1M4 LINE L1 4628 5097 -1049 573 195 17 17 chr5 37956150 37956324 -161673826 + CT-rich Low_complexity Low_complexity 3 176 0 207 0 0 0 chr5 37956329 37956352 -161673798 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 2204 128 0 3 chr5 37956360 37956658 -161673492 - AluJb SINE Alu -15 297 1 4693 143 24 24 chr5 37956682 37957572 -161672578 - L1MA3 LINE L1 -25 6280 5391 2490 146 65 2 chr5 37957572 37957975 -161672175 + MSTA LTR MaLR 1 428 0 2212 111 0 10 chr5 37957986 37958283 -161671867 - AluSx SINE Alu -13 299 6 304 75 0 0 chr5 37958284 37958324 -161671826 + MSTA LTR MaLR 388 427 -1 4052 183 7 11 chr5 37958325 37959193 -161670957 - L1MA3 LINE L1 -751 5395 4532 1852 156 0 0 chr5 37959194 37959469 -161670681 - AluSx SINE Alu -37 275 1 3129 163 24 0 chr5 37959470 37960230 -161669920 - L1MC/D LINE L1 -543 5801 5028 1846 108 40 0 chr5 37960417 37960668 -161669482 - AluSc SINE Alu -48 261 1 836 128 0 8 chr5 37960668 37960785 -161669365 - AluSq/x SINE Alu -197 116 1 2486 74 3 0 chr5 37960795 37961091 -161669059 - AluSp SINE Alu -16 297 1 2484 71 10 0 chr5 37961091 37961388 -161668762 - AluSc SINE Alu -9 300 1 579 318 77 24 chr5 37961389 37961901 -161668249 - L2 LINE L2 -233 3080 2542 278 276 86 69 chr5 37961904 37961944 -161668206 + L2 LINE L2 2626 2664 -608 2423 62 0 23 chr5 37961944 37962249 -161667901 - AluY SINE Alu 0 311 14 2056 129 0 43 chr5 37962249 37962438 -161667712 - AluSx SINE Alu -1 311 140 2390 85 0 7 chr5 37962438 37962744 -161667406 - AluSc SINE Alu -5 304 1 2056 129 0 43 chr5 37962744 37962879 -161667271 - AluSx SINE Alu -172 140 1 278 276 86 69 chr5 37962879 37963219 -161666931 + L2 LINE L2 2663 3040 -232 1877 138 24 7 chr5 37963231 37963522 -161666628 - AluSx SINE Alu -16 296 1 554 194 78 8 chr5 37963645 37963774 -161666376 - L2 LINE L2 -719 2595 2458 517 257 49 7 chr5 37963825 37963969 -161666181 + MIR SINE MIR 113 262 0 770 130 32 186 chr5 37964243 37964359 -161665791 - L1MB5 LINE L1 -8 6166 6108 2280 114 13 0 chr5 37964359 37964666 -161665484 - AluSx SINE Alu -1 311 1 770 130 32 186 chr5 37964666 37964802 -161665348 - L1MB5 LINE L1 -66 6108 5953 2145 128 3 19 chr5 37964818 37965130 -161665020 - AluJb SINE Alu -5 307 1 185 35 69 0 chr5 37965130 37965159 -161664991 + T-rich Low_complexity Low_complexity 2 32 0 1021 149 70 152 chr5 37965164 37965234 -161664916 - AluJo SINE Alu 0 302 228 2145 104 0 0 chr5 37965234 37965559 -161664591 + AluSg SINE Alu 2 326 0 1021 149 70 152 chr5 37965559 37965656 -161664494 - AluJo SINE Alu -74 228 125 2211 97 10 19 chr5 37965656 37965965 -161664185 - AluSq SINE Alu -7 306 1 1021 149 70 152 chr5 37965965 37966122 -161664028 - AluJo SINE Alu -177 125 1 374 238 69 0 chr5 37966133 37966234 -161663916 + MER112 DNA MER1_type 116 223 -37 421 192 64 0 chr5 37966244 37966322 -161663828 - MER5B DNA MER1_type -22 156 74 778 112 0 9 chr5 37966346 37966453 -161663697 - FLAM_C SINE Alu -25 118 13 2164 88 3 79 chr5 37966453 37966782 -161663368 + AluY SINE Alu 1 304 -7 255 203 40 40 chr5 37966782 37966856 -161663294 + MER5B DNA MER1_type 104 177 -1 360 0 0 0 chr5 37966958 37966998 -161663152 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2216 88 11 0 chr5 37967000 37967283 -161662867 - AluSg SINE Alu -24 286 1 252 0 0 0 chr5 37967284 37967312 -161662838 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2224 102 3 0 chr5 37967312 37967595 -161662555 - AluSp SINE Alu -29 284 1 1900 153 7 3 chr5 37967597 37967885 -161662265 - AluJb SINE Alu -19 293 5 2265 113 3 3 chr5 37968616 37968927 -161661223 - AluSp SINE Alu -2 311 1 1607 185 3 24 chr5 37969402 37969700 -161660450 + AluJo SINE Alu 1 292 -20 227 229 0 0 chr5 37970072 37970120 -161660030 - Alu SINE Alu -168 134 87 192 77 0 0 chr5 37970659 37970685 -161659465 + (CCCCG)n Simple_repeat Simple_repeat 1 26 0 226 191 44 0 chr5 37970742 37970810 -161659340 + (CGGGG)n Simple_repeat Simple_repeat 3 73 0 220 270 0 44 chr5 37970862 37970999 -161659151 + (CGGGG)n Simple_repeat Simple_repeat 1 131 0 * 267 283 11 28 chr5 37970920 37971100 -161659050 + G-rich Low_complexity Low_complexity 4 180 0 334 300 84 14 chr5 37972687 37972843 -161657307 + MIR SINE MIR 35 200 -62 240 319 8 35 chr5 37975431 37975608 -161654542 + CT-rich Low_complexity Low_complexity 1 172 0 591 15 0 0 chr5 37975614 37975682 -161654468 + (TC)n Simple_repeat Simple_repeat 1 68 0 596 97 0 6 chr5 37977840 37978080 -161652070 + AluSx SINE Alu 1 288 -22 703 175 0 16 chr5 37978111 37978237 -161651913 + FLAM_A SINE Alu 6 129 -13 697 113 40 8 chr5 37980302 37980426 -161649724 + L1MC2 LINE L1 6066 6193 -151 257 336 107 7 chr5 37981015 37981155 -161648995 - MIR SINE MIR 0 262 109 234 164 73 0 chr5 37981504 37981559 -161648591 - L1M4 LINE L1 -966 5180 5122 4107 160 24 21 chr5 37981827 37982655 -161647495 + L1MC2 LINE L1 4962 5793 -551 2100 138 3 10 chr5 37982655 37982967 -161647183 + AluSx SINE Alu 1 310 -2 4107 160 24 21 chr5 37982967 37983176 -161646974 + L1MC2 LINE L1 5793 6000 -344 691 164 109 0 chr5 37983173 37983301 -161646849 - L1M1 LINE L1 -6007 1558 1417 * 4992 196 11 61 chr5 37983302 37983839 -161646311 + L1MA3 LINE L1 3840 4402 -1744 1313 156 0 19 chr5 37983839 37984050 -161646100 + AluJb SINE Alu 85 291 -21 4992 196 11 61 chr5 37984050 37985069 -161645081 + L1MA3 LINE L1 4402 5395 -751 304 75 0 0 chr5 37985070 37985110 -161645040 - MSTA LTR MaLR -1 427 388 2218 96 17 7 chr5 37985111 37985404 -161644746 + AluSx SINE Alu 6 301 -11 2609 140 54 2 chr5 37985415 37985822 -161644328 - MSTA LTR MaLR 0 428 1 4914 142 24 7 chr5 37985822 37986703 -161643447 + L1MA3 LINE L1 5391 6286 -19 2180 131 0 3 chr5 37986721 37987018 -161643132 + AluJb SINE Alu 1 296 -16 657 203 17 11 chr5 37987026 37987203 -161642947 + GA-rich Low_complexity Low_complexity 1 178 0 246 94 0 0 chr5 37987203 37987235 -161642915 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 529 109 0 6 chr5 37989597 37989837 -161640313 + AluSx SINE Alu 1 287 -22 601 194 0 0 chr5 37989868 37989971 -161640179 + FLAM_A SINE Alu 6 108 -34 1385 125 0 5 chr5 37990267 37990459 -161639691 - AluSx SINE Alu -121 191 1 1785 146 0 0 chr5 37990462 37990715 -161639435 - AluJo SINE Alu -10 302 50 2913 100 20 11 chr5 37990722 37991172 -161638978 - LTR15 LTR ERV1 -6 487 34 1251 134 0 6 chr5 37991329 37991508 -161638642 - AluSg/x SINE Alu -16 294 117 418 160 0 0 chr5 37991508 37991583 -161638567 + Alu SINE Alu 234 308 -3 337 286 85 54 chr5 37992100 37992303 -161637847 - MIR SINE MIR -18 244 32 2179 117 7 7 chr5 37992303 37992602 -161637548 - AluSx SINE Alu -13 299 1 337 286 85 54 chr5 37992602 37992622 -161637528 - MIR SINE MIR -230 32 14 1096 194 85 32 chr5 37993068 37993316 -161636834 - AluJo SINE Alu -15 297 37 419 287 93 16 chr5 37993324 37993582 -161636568 + L1ME LINE L1 5521 5798 -323 2428 65 0 0 chr5 37993633 37993924 -161636226 - AluY SINE Alu -20 291 1 591 312 43 4 chr5 37993924 37994158 -161635992 - LTR33 LTR ERVL -65 456 214 391 229 86 50 chr5 37994187 37994327 -161635823 - LTR33 LTR ERVL -376 145 1 1903 156 7 0 chr5 37994337 37994620 -161635530 + AluSg SINE Alu 15 299 -11 2862 157 5 74 chr5 37994829 37995091 -161635059 + L1PA16 LINE L1 5512 5791 -375 2109 135 0 13 chr5 37995091 37995403 -161634747 + AluSx SINE Alu 1 308 -4 2862 157 5 74 chr5 37995403 37995759 -161634391 + L1PA16 LINE L1 5791 6093 -73 972 194 83 12 chr5 37995867 37996109 -161634041 + MLT1D LTR MaLR 180 438 -67 273 98 0 0 chr5 37996116 37996157 -161633993 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 1591 189 0 14 chr5 37996167 37996442 -161633708 - AluJo SINE Alu -41 271 1 1183 189 9 0 chr5 37996443 37996660 -161633490 - MLT1D LTR MaLR -286 219 1 459 310 38 16 chr5 37996720 37996904 -161633246 - MIR SINE MIR -69 193 6 1354 173 46 25 chr5 37996939 37997074 -161633076 + AluJb SINE Alu 1 132 -180 1882 128 58 7 chr5 37997074 37997348 -161632802 + AluSx SINE Alu 1 288 -24 1354 173 46 25 chr5 37997348 37997496 -161632654 + AluJb SINE Alu 132 290 -22 655 175 0 16 chr5 37997527 37997653 -161632497 + FLAM_A SINE Alu 6 129 -13 692 120 32 8 chr5 37999718 37999843 -161630307 + L1MC2 LINE L1 6066 6193 -151 260 331 40 20 chr5 38000431 38000582 -161629568 - MIR SINE MIR 0 262 109 234 148 74 0 chr5 38000935 38000989 -161629161 - L1M4 LINE L1 -966 5180 5123 870 92 64 21 chr5 38001159 38001300 -161628850 - AluSx SINE Alu -135 177 31 1474 115 0 5 chr5 38001521 38001713 -161628437 - AluSx SINE Alu -121 191 1 1741 150 0 4 chr5 38001716 38001969 -161628181 - AluJo SINE Alu -11 301 50 2868 109 20 11 chr5 38001976 38002426 -161627724 - LTR15 LTR ERV1 -6 487 34 1249 135 0 6 chr5 38002583 38002761 -161627389 - AluSg/x SINE Alu -17 295 119 416 147 0 0 chr5 38002761 38002836 -161627314 + Alu SINE Alu 235 309 -3 310 308 86 41 chr5 38003345 38003545 -161626605 - MIR SINE MIR -18 244 32 2328 102 7 3 chr5 38003545 38003848 -161626302 - AluSx SINE Alu -8 304 1 310 308 86 41 chr5 38003848 38003868 -161626282 - MIR SINE MIR -230 32 14 1171 169 83 51 chr5 38004319 38004573 -161625577 - AluJo SINE Alu -14 298 37 524 296 86 15 chr5 38004581 38004848 -161625302 + L1MC/D LINE L1 5521 5806 -2002 558 291 78 26 chr5 38004848 38004899 -161625251 - LTR33 LTR ERVL -8 513 466 2383 107 0 0 chr5 38004899 38005208 -161624942 - AluY SINE Alu -2 309 1 558 291 78 26 chr5 38005208 38005427 -161624723 - LTR33 LTR ERVL -55 466 229 534 361 9 37 chr5 38005577 38005874 -161624276 - ERVL LTR ERVL -4435 1329 1048 2231 141 0 0 chr5 38005874 38006186 -161623964 - AluSx SINE Alu 0 312 1 534 361 9 37 chr5 38006186 38006345 -161623805 - ERVL LTR ERVL -4716 1048 886 2010 126 25 0 chr5 38006361 38006664 -161623486 + AluSx SINE Alu 1 310 0 470 319 48 35 chr5 38006764 38007016 -161623134 - ERVL LTR ERVL -5095 669 411 1829 191 0 0 chr5 38007016 38007314 -161622836 + AluJo SINE Alu 1 298 -14 470 319 48 35 chr5 38007314 38007375 -161622775 - ERVL LTR ERVL -5353 411 352 243 88 0 0 chr5 38007409 38007443 -161622707 + (TTA)n Simple_repeat Simple_repeat 2 35 0 244 330 34 25 chr5 38007443 38007561 -161622589 - MIR SINE MIR -124 138 20 1706 229 19 65 chr5 38007965 38008440 -161621710 + MSTB2 LTR MaLR 5 457 0 1846 164 0 11 chr5 38008513 38008799 -161621351 + AluSx SINE Alu 3 285 -27 695 276 27 5 chr5 38009037 38009258 -161620892 + L1MC/D LINE L1 5575 5800 -2008 448 222 28 0 chr5 38009258 38009366 -161620784 - LTR33 LTR ERVL 0 521 411 1388 148 20 128 chr5 38009473 38009818 -161620332 + AluYb8 SINE Alu 1 308 0 2245 96 17 10 chr5 38009826 38010127 -161620023 + AluSq SINE Alu 1 303 -10 1866 151 0 7 chr5 38010252 38010558 -161619592 + AluSx SINE Alu 1 304 0 1308 199 57 37 chr5 38010570 38010867 -161619283 + AluJo SINE Alu 3 305 -7 789 138 231 0 chr5 38010888 38011048 -161619102 + MSTA LTR MaLR 1 197 -231 2272 113 3 0 chr5 38011049 38011340 -161618810 + AluSx SINE Alu 1 292 -20 2086 98 27 27 chr5 38011906 38012201 -161617949 + AluSq SINE Alu 1 295 -18 229 288 39 59 chr5 38012227 38012380 -161617770 + MIR SINE MIR 63 212 -50 2216 104 17 0 chr5 38012548 38012847 -161617303 + AluY SINE Alu 1 304 -7 216 288 12 25 chr5 38013626 38013706 -161616444 - MIR3 SINE MIR -6 202 124 * 355 313 187 11 chr5 38013703 38013885 -161616265 - MIR SINE MIR -3 259 46 342 289 84 14 chr5 38015006 38015162 -161614988 + MIR SINE MIR 35 200 -62 2128 18 4 0 chr5 38018111 38018340 -161611810 - SVA Other Other 0 1386 1157 373 282 92 56 chr5 38021844 38022039 -161608111 - MIR SINE MIR -29 233 32 214 363 11 0 chr5 38022300 38022391 -161607759 - MIR SINE MIR -61 147 56 340 268 290 0 chr5 38022477 38022615 -161607535 + MER5B DNA MER1_type 1 178 0 224 172 17 0 chr5 38023121 38023179 -161606971 + G-rich Low_complexity Low_complexity 5 63 0 2121 119 17 0 chr5 38025462 38025757 -161604393 + AluSx SINE Alu 1 300 -12 464 183 5 28 chr5 38027891 38028066 -161602084 + MSR1 Satellite Satellite 1 170 -6 1993 132 44 0 chr5 38028966 38029261 -161600889 - AluSq SINE Alu -5 308 1 420 292 81 44 chr5 38029973 38030226 -161599924 + L1MDa LINE L1 2436 3699 -2841 1330 153 5 0 chr5 38030338 38030566 -161599584 + AluSg/x SINE Alu 87 315 0 636 221 13 27 chr5 38030581 38030730 -161599420 + AluJo SINE Alu 9 155 -157 207 263 0 66 chr5 38032432 38032508 -161597642 - MIR SINE MIR -112 150 80 218 313 31 10 chr5 38033019 38033115 -161597035 + G-rich Low_complexity Low_complexity 4 101 0 364 290 54 21 chr5 38033223 38033409 -161596741 - MIR SINE MIR 0 262 71 4496 145 25 13 chr5 38033956 38035014 -161595136 + L1MC2 LINE L1 4962 6033 -311 2269 85 23 7 chr5 38035020 38035326 -161594824 - AluY SINE Alu 0 311 1 323 48 0 250 chr5 38035327 38035411 -161594739 + MLT1C LTR MaLR 403 465 -2 1306 211 64 43 chr5 38035413 38035612 -161594538 + L1MB8 LINE L1 5748 5941 -237 2230 119 0 0 chr5 38035612 38035907 -161594243 + AluSx SINE Alu 1 295 -17 1306 211 64 43 chr5 38035907 38036129 -161594021 + L1MB8 LINE L1 5941 6178 0 199 352 0 0 chr5 38036435 38036506 -161593644 + L2 LINE L2 3141 3211 -61 2173 106 7 0 chr5 38036586 38036870 -161593280 - AluSc SINE Alu -18 291 6 2211 118 3 7 chr5 38036985 38037291 -161592859 - AluSx SINE Alu -7 305 1 473 276 5 70 chr5 38037717 38037931 -161592219 + LTR16B LTR ERVL 256 455 -9 1999 112 32 11 chr5 38037958 38038257 -161591893 - AluSx SINE Alu 0 305 1 2283 115 0 3 chr5 38038782 38039087 -161591063 + AluSx SINE Alu 1 304 -8 864 276 120 42 chr5 38039166 38039619 -161590531 + L2 LINE L2 2450 2866 -447 2125 132 7 3 chr5 38039619 38039922 -161590228 - AluSx SINE Alu -8 304 1 864 276 120 42 chr5 38039922 38040253 -161589897 + L2 LINE L2 2866 3312 -1 2086 139 0 0 chr5 38040345 38040639 -161589511 + AluSx SINE Alu 1 294 -18 199 370 19 19 chr5 38041567 38041675 -161588475 + MIR SINE MIR 107 214 -48 188 245 0 38 chr5 38041763 38041816 -161588334 - L2 LINE L2 -1 3312 3262 * 195 316 101 87 chr5 38041784 38042002 -161588148 - MIR SINE MIR -14 248 28 2261 119 0 0 chr5 38042015 38042318 -161587832 - AluSx SINE Alu -4 308 6 924 268 92 3 chr5 38042362 38042657 -161587493 + MER58B DNA MER1_type 1 321 -20 231 36 0 0 chr5 38043359 38043387 -161586763 + (CAAAA)n Simple_repeat Simple_repeat 5 32 0 2072 114 38 0 chr5 38043478 38043767 -161586383 - AluSg SINE Alu -10 300 1 310 280 46 46 chr5 38044043 38044209 -161585941 + MIR SINE MIR 88 256 -6 2224 135 0 0 chr5 38044209 38044521 -161585629 - AluSx SINE Alu 0 312 1 1116 244 86 80 chr5 38044774 38045009 -161585141 + MLT1D LTR MaLR 5 237 -268 2000 134 17 0 chr5 38045009 38045308 -161584842 + AluSx SINE Alu 1 304 -8 1116 244 86 80 chr5 38045308 38045559 -161584591 + MLT1D LTR MaLR 237 494 -11 295 289 0 0 chr5 38045649 38045732 -161584418 + MIR SINE MIR 174 256 -6 2244 86 7 0 chr5 38045889 38046189 -161583961 + AluSq SINE Alu 1 302 0 297 0 0 0 chr5 38046421 38046454 -161583696 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 797 112 28 14 chr5 38046536 38046679 -161583471 + L1MB2 LINE L1 6019 6163 -8 896 187 6 12 chr5 38046844 38047010 -161583140 - FRAM SINE Alu -12 164 1 2425 60 0 3 chr5 38047021 38047303 -161582847 - AluY SINE Alu -14 297 17 255 331 29 0 chr5 38047899 38048074 -161582076 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 528 68 0 0 chr5 38048128 38048201 -161581949 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 2330 94 10 0 chr5 38048396 38048694 -161581456 + AluSp SINE Alu 3 303 -10 234 0 0 0 chr5 38048694 38048720 -161581430 + (TA)n Simple_repeat Simple_repeat 2 27 0 221 322 134 45 chr5 38048757 38048845 -161581305 + MIR SINE MIR 21 100 -162 2298 112 0 13 chr5 38048845 38049149 -161581001 - AluSq SINE Alu -13 300 1 221 322 134 45 chr5 38049149 38049262 -161580888 + MIR SINE MIR 100 240 -22 186 325 0 36 chr5 38049688 38049771 -161580379 + MIR3 SINE MIR 127 206 -2 272 274 123 9 chr5 38050577 38050683 -161579467 + MIR SINE MIR 29 146 -116 1952 134 19 29 chr5 38050693 38051006 -161579144 - AluSx SINE Alu -1 311 2 1483 123 13 0 chr5 38051102 38051330 -161578820 - L1MA6 LINE L1 -5 6295 6065 247 273 50 0 chr5 38051659 38051758 -161578392 - MER20B DNA MER1_type -31 752 649 2174 87 25 0 chr5 38052357 38052483 -161577667 + AluSq SINE Alu 1 122 -190 327 49 0 0 chr5 38052483 38052524 -161577626 + (CA)n Simple_repeat Simple_repeat 2 42 0 2174 87 25 0 chr5 38052524 38052702 -161577448 + AluSq SINE Alu 122 312 0 215 204 0 37 chr5 38052709 38052830 -161577320 + GA-rich Low_complexity Low_complexity 1 116 0 638 101 0 50 chr5 38053139 38053238 -161576912 - AluSg/x SINE Alu -18 292 199 674 203 10 58 chr5 38053246 38053282 -161576868 - L1 LINE L1 -3758 2624 2588 2219 78 27 17 chr5 38053282 38053576 -161576574 - AluSc SINE Alu -12 297 1 674 203 10 58 chr5 38053576 38053762 -161576388 - L1 LINE L1 -3794 2588 2410 1516 89 0 0 chr5 38053768 38053959 -161576191 + AluYa5 SINE Alu 110 300 -11 455 130 0 0 chr5 38053959 38054028 -161576122 + AluS SINE Alu 233 301 -10 2091 95 27 27 chr5 38054574 38054870 -161575280 + AluSq SINE Alu 1 296 -17 206 252 37 65 chr5 38054896 38055003 -161575147 + MIR SINE MIR 63 166 -96 2199 102 16 0 chr5 38055217 38055520 -161574630 + AluY SINE Alu 1 308 -3 193 284 30 0 chr5 38056301 38056368 -161573782 - MIR3 SINE MIR -15 193 125 450 198 232 34 chr5 38106632 38106797 -161523353 + MIR SINE MIR 2 198 -36 404 123 0 0 chr5 38106800 38106857 -161523293 - LTR16C LTR ERVL -5 486 430 764 181 9 0 chr5 38107096 38107212 -161522938 - FLAM_A SINE Alu -25 117 1 1006 219 17 0 chr5 38107213 38107391 -161522759 + MER58A DNA MER1_type 42 222 -2 365 259 0 0 chr5 38107402 38107483 -161522667 - LTR16C LTR ERVL -219 272 192 2159 127 0 3 chr5 38107484 38107783 -161522367 + AluSx SINE Alu 1 298 -14 3634 113 43 0 chr5 38107833 38108339 -161521811 + MER1A DNA MER1_type 2 529 0 182 188 0 83 chr5 38108460 38108508 -161521642 - MER5B DNA MER1_type -1 177 134 519 131 48 0 chr5 38108508 38108592 -161521558 - AluSc SINE Alu -8 301 214 2013 78 0 0 chr5 38108592 38108834 -161521316 - AluSc SINE Alu -50 259 18 315 215 6 76 chr5 38108834 38108944 -161521206 - MER5B DNA MER1_type -39 150 45 1849 174 17 26 chr5 38109229 38109579 -161520571 - L1MB5 LINE L1 -8 6166 5820 1379 174 146 0 chr5 38109708 38109859 -161520291 - AluJb SINE Alu -19 283 155 228 35 0 0 chr5 38109859 38109888 -161520262 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1379 174 146 0 chr5 38109888 38109983 -161520167 - AluJb SINE Alu -147 155 1 734 200 8 8 chr5 38110299 38110429 -161519721 - FLAM_A SINE Alu 0 133 4 480 62 0 0 chr5 38111425 38111489 -161518661 + (TG)n Simple_repeat Simple_repeat 2 65 0 1968 111 36 4 chr5 38112372 38112651 -161517499 - AluSq SINE Alu -24 289 2 577 205 96 24 chr5 38112757 38112923 -161517227 - MER5B DNA MER1_type 0 178 1 306 0 0 0 chr5 38113039 38113073 -161517077 + (TC)n Simple_repeat Simple_repeat 1 34 0 2663 107 6 8 chr5 38113347 38113703 -161516447 + THE1A LTR MaLR 1 355 0 12272 96 8 9 chr5 38113703 38115286 -161514864 + THE1A-int LTR MaLR 1 1580 0 2532 118 8 8 chr5 38115286 38115641 -161514509 + THE1A LTR MaLR 1 355 0 351 295 9 9 chr5 38115782 38115894 -161514256 - LTR33A LTR ERVL -402 121 10 228 122 0 0 chr5 38116079 38116120 -161514030 + (CCA)n Simple_repeat Simple_repeat 2 42 0 2163 114 3 3 chr5 38116379 38116686 -161513464 + THE1-int LTR MaLR 929 1235 -345 547 125 0 0 chr5 38116684 38116764 -161513386 - THE1-int LTR MaLR -572 1008 929 * 199 298 0 0 chr5 38117062 38117119 -161513031 - L2 LINE L2 -61 3252 3196 2149 126 0 0 chr5 38117208 38117501 -161512649 + AluSx SINE Alu 3 295 -17 263 314 141 13 chr5 38118079 38118235 -161511915 - MIR3 SINE MIR -5 203 28 1764 135 14 17 chr5 38118240 38118529 -161511621 - AluSx SINE Alu -24 288 1 443 283 139 0 chr5 38118555 38118721 -161511429 - MER5A DNA MER1_type 0 189 1 506 296 129 1 chr5 38119062 38119304 -161510846 - L2 LINE L2 -276 3037 2774 31 76 0 0 chr5 38119304 38119370 -161510780 + AT_rich Low_complexity Low_complexity 1 66 0 335 266 18 28 chr5 38119636 38119745 -161510405 + MIR3 SINE MIR 86 193 -15 1940 137 0 38 chr5 38120398 38120711 -161509439 - AluJb SINE Alu -9 303 3 181 250 39 0 chr5 38120749 38120801 -161509349 + MIR SINE MIR 8 61 -201 289 122 0 0 chr5 38120850 38120891 -161509259 + MADE1 DNA Mariner 40 80 0 349 118 106 12 chr5 38120896 38120981 -161509169 + MIR SINE MIR 106 198 -64 2745 135 28 6 chr5 38121625 38122372 -161507778 + L1MA4A LINE L1 4900 5665 -638 6130 159 22 25 chr5 38122375 38122528 -161507622 + L1MA3 LINE L1 4126 4278 -1868 1854 137 3 56 chr5 38122528 38122850 -161507300 + AluSx SINE Alu 3 307 -5 6130 159 22 25 chr5 38122850 38123906 -161506244 + L1MA3 LINE L1 4278 5332 -814 804 154 8 0 chr5 38123914 38124031 -161506119 + FLAM_C SINE Alu 9 126 -17 6404 98 20 37 chr5 38124040 38124979 -161505171 + L1MA3 LINE L1 5321 6243 -62 1813 176 0 3 chr5 38124979 38125269 -161504881 + AluJb SINE Alu 1 289 -23 6404 98 20 37 chr5 38125269 38125331 -161504819 + L1MA3 LINE L1 6243 6305 0 1971 142 16 7 chr5 38125341 38125644 -161504506 + AluSx SINE Alu 1 306 -6 3021 130 50 75 chr5 38125644 38125952 -161504198 + L1MA4A LINE L1 5661 5975 -328 2332 108 3 0 chr5 38125952 38126258 -161503892 + AluSx SINE Alu 1 307 -5 3021 130 50 75 chr5 38126258 38126601 -161503549 + L1MA4A LINE L1 5975 6297 -6 379 232 211 25 chr5 38126668 38126820 -161503330 - MER5A DNA MER1_type -1 188 9 621 121 0 0 chr5 38126868 38126951 -161503199 + AluJ/FLAM SINE Alu 2 84 -228 594 133 163 0 chr5 38127093 38127191 -161502959 + FLAM_C SINE Alu 4 117 -16 15151 38 3 2 chr5 38127311 38129834 -161500316 + L1PA5 LINE L1 3623 6148 -6 1077 170 6 0 chr5 38129843 38130014 -161500136 + LTR8 LTR ERV1 511 682 -9 279 270 12 20 chr5 38130314 38130562 -161499588 + CT-rich Low_complexity Low_complexity 1 246 0 609 185 0 0 chr5 38130566 38130685 -161499465 + T-rich Low_complexity Low_complexity 1 119 0 928 30 59 44 chr5 38130699 38130834 -161499316 + L1PA5 LINE L1 6018 6154 0 1066 177 16 0 chr5 38131032 38131224 -161498926 + L1M4 LINE L1 5484 5678 -500 3608 92 55 6 chr5 38131225 38131712 -161498438 - MER9 LTR ERVK 0 511 1 11304 103 7 3 chr5 38131721 38133572 -161496578 - HERVK9 LTR ERVK 0 8032 4155 6775 86 3 0 chr5 38133574 38134447 -161495703 - HERVK9 LTR ERVK -2012 3904 3029 * 9332 77 7 0 chr5 38134432 38135620 -161494530 - HERVK9 LTR ERVK -3297 2619 1424 4046 92 10 23 chr5 38135618 38136193 -161493957 - HERVK9 LTR ERVK -5348 568 1 * 3205 123 69 6 chr5 38136193 38136674 -161493476 - MER9 LTR ERVK 0 511 1 2508 189 44 19 chr5 38136675 38137216 -161492934 + L1MB7 LINE L1 5614 6168 -16 1920 152 9 19 chr5 38137352 38137667 -161492483 - AluJb SINE Alu 0 312 1 930 157 18 97 chr5 38137667 38137884 -161492266 - MER20 DNA MER1_type -19 200 1 313 267 155 9 chr5 38137894 38138010 -161492140 + L2 LINE L2 3181 3313 0 2233 115 3 0 chr5 38138136 38138431 -161491719 + AluSx SINE Alu 1 296 -16 203 203 419 0 chr5 38139268 38139342 -161490808 - MIR SINE MIR -118 144 40 237 182 13 26 chr5 38140163 38140240 -161489910 + (TA)n Simple_repeat Simple_repeat 1 76 0 1064 244 168 12 chr5 38141058 38141476 -161488674 - LTR33 LTR ERVL -2 519 37 182 283 50 0 chr5 38141588 38141648 -161488502 + L3b LINE CR1 1431 1493 -90 2497 71 0 3 chr5 38141672 38141982 -161488168 - AluY SINE Alu -2 309 1 457 192 67 129 chr5 38142886 38143079 -161487071 + L1ME3A LINE L1 5988 6168 -2 2216 121 0 16 chr5 38143589 38143896 -161486254 + AluSx SINE Alu 1 302 -10 483 313 26 36 chr5 38144039 38144234 -161485916 - MIR3 SINE MIR -6 202 10 201 288 0 45 chr5 38144247 38144313 -161485837 + MIR SINE MIR 32 94 -168 277 302 78 9 chr5 38144754 38144870 -161485280 + MIR SINE MIR 130 253 -9 304 333 77 19 chr5 38145123 38145279 -161484871 + MIR SINE MIR 23 187 -75 2047 133 3 10 chr5 38145562 38145862 -161484288 + AluSx SINE Alu 1 298 -14 315 49 0 0 chr5 38146268 38146309 -161483841 + (CA)n Simple_repeat Simple_repeat 2 42 0 365 294 17 8 chr5 38146309 38146428 -161483722 - MER5B DNA MER1_type -52 126 7 741 256 128 55 chr5 38146726 38147124 -161483026 - MARNA DNA Mariner -84 502 76 2299 92 0 10 chr5 38147481 38147787 -161482363 - AluSx SINE Alu -9 303 1 432 228 189 43 chr5 38147795 38148076 -161482074 - L1ME4a LINE L1 0 6121 5800 498 17 0 0 chr5 38148930 38148989 -161481161 + (CA)n Simple_repeat Simple_repeat 2 60 0 2530 50 7 0 chr5 38149134 38149435 -161480715 - AluY SINE Alu -8 303 1 2204 84 21 0 chr5 38150910 38151196 -161478954 + AluSx SINE Alu 1 292 -20 1463 169 31 4 chr5 38151237 38151491 -161478659 + AluJo SINE Alu 1 261 -51 969 179 113 15 chr5 38151528 38151723 -161478427 + MER20 DNA MER1_type 1 214 -5 800 11 0 0 chr5 38151728 38151817 -161478333 + 5S rRNA rRNA 2 90 -31 414 293 35 88 chr5 38152014 38152297 -161477853 - L2 LINE L2 -13 3300 3033 1885 144 0 31 chr5 38152716 38153037 -161477113 + AluJb SINE Alu 3 314 0 23 33 0 0 chr5 38153122 38153152 -161476998 + AT_rich Low_complexity Low_complexity 1 30 0 2364 99 0 3 chr5 38155006 38155318 -161474832 + AluSx SINE Alu 1 311 -1 606 290 116 68 chr5 38155373 38156278 -161473872 - L2 LINE L2 -48 3224 2273 762 205 165 5 chr5 38156304 38156504 -161473646 + MIR SINE MIR 15 246 -16 362 291 107 53 chr5 38156544 38157057 -161473093 - L2 LINE L2 -1075 2239 1608 1877 166 94 0 chr5 38158192 38158499 -161471651 - MER1B DNA MER1_type -1 336 1 3666 95 36 16 chr5 38158584 38159088 -161471062 + MER75 DNA T2_type 1 514 0 237 224 15 15 chr5 38159105 38159172 -161470978 - Charlie7 DNA MER1_type -34 2578 2512 291 171 92 0 chr5 38159187 38159263 -161470887 - Charlie7 DNA MER1_type -2470 142 60 2318 72 7 0 chr5 38161833 38162124 -161468026 + AluSp SINE Alu 1 293 -20 26 0 0 0 chr5 38164315 38164341 -161465809 + AT_rich Low_complexity Low_complexity 1 26 0 1969 102 0 42 chr5 38164412 38164548 -161465602 + AluSx SINE Alu 1 120 -192 2379 102 0 0 chr5 38164548 38164853 -161465297 + AluSc SINE Alu 1 305 -4 1969 102 0 42 chr5 38164853 38165000 -161465150 + AluSx SINE Alu 120 272 -40 1912 159 65 3 chr5 38165029 38165382 -161464768 + L1MA8 LINE L1 5917 6291 0 736 176 167 32 chr5 38165513 38165734 -161464416 + L1MD3 LINE L1 7745 7995 0 242 211 0 0 chr5 38165858 38165915 -161464235 - L1ME4a LINE L1 0 6121 6065 2217 94 13 23 chr5 38166435 38166742 -161463408 + AluY SINE Alu 1 304 -7 2289 235 58 20 chr5 38166745 38167411 -161462739 + L1ME1 LINE L1 5449 6299 -35 1069 218 77 2 chr5 38168483 38168833 -161461317 + Charlie4a DNA MER1_type 34 473 -35 890 136 0 0 chr5 38169199 38169349 -161460801 - FLAM_C SINE Alu 0 150 1 1512 132 25 107 chr5 38169744 38170063 -161460087 + AluYb8 SINE Alu 1 293 -25 364 361 56 25 chr5 38170513 38170837 -161459313 - L2 LINE L2 -457 2857 2524 50 92 0 0 chr5 38171526 38171667 -161458483 + AT_rich Low_complexity Low_complexity 1 141 0 291 114 0 0 chr5 38171677 38171721 -161458429 + (TA)n Simple_repeat Simple_repeat 1 44 0 2193 20 0 16 chr5 38172118 38172368 -161457782 - AluY SINE Alu 0 311 66 206 277 15 0 chr5 38172920 38172985 -161457165 + GA-rich Low_complexity Low_complexity 2 67 0 2447 81 0 10 chr5 38174108 38174418 -161455732 + AluSx SINE Alu 1 307 -5 1427 198 55 4 chr5 38174454 38174727 -161455423 + AluJo SINE Alu 2 288 -24 2419 182 51 25 chr5 38176370 38176859 -161453291 - MLT1D LTR MaLR -3 502 1 372 356 153 13 chr5 38177204 38177440 -161452710 - L2 LINE L2 -11 3261 2993 744 319 79 22 chr5 38177579 38177986 -161452164 - L2 LINE L2 -2368 946 517 388 222 28 67 chr5 38178376 38178556 -161451594 - L1ME4a LINE L1 -14 6107 5935 226 208 0 0 chr5 38178545 38178598 -161451552 - L1MC4 LINE L1 -1337 6705 6653 * 273 57 0 0 chr5 38178599 38178634 -161451516 + (CA)n Simple_repeat Simple_repeat 2 36 0 1951 111 0 0 chr5 38178646 38178899 -161451251 - AluSx SINE Alu -26 286 34 1754 168 7 0 chr5 38179444 38179724 -161450426 - AluJb SINE Alu -26 286 5 447 247 96 14 chr5 38183042 38183261 -161446889 - L1MC4 LINE L1 -1916 5892 5656 2390 117 54 20 chr5 38183993 38184344 -161445806 - THE1B LTR MaLR -1 363 1 1795 184 113 76 chr5 38184466 38184951 -161445199 + MLT1D LTR MaLR 3 505 0 253 307 136 34 chr5 38185035 38185123 -161445027 - L2 LINE L2 -32 3240 3144 776 286 78 37 chr5 38185199 38185521 -161444629 + L2 LINE L2 2804 3138 -175 2303 107 10 0 chr5 38185528 38185836 -161444314 - AluSq SINE Alu -2 311 1 497 313 16 0 chr5 38185859 38185987 -161444163 + MER91A DNA MER1_type 49 178 -18 458 318 12 18 chr5 38186021 38186191 -161443959 + L2 LINE L2 3145 3313 0 2223 104 7 3 chr5 38186692 38186989 -161443161 + AluSx SINE Alu 1 298 -14 2112 81 56 0 chr5 38189346 38189631 -161440519 - AluSx SINE Alu -8 304 4 1354 114 30 5 chr5 38190282 38190507 -161439643 + AluSg/x SINE Alu 77 306 0 22 35 0 0 chr5 38190611 38190640 -161439510 + AT_rich Low_complexity Low_complexity 1 29 0 878 237 76 0 chr5 38190740 38190951 -161439199 - MIR SINE MIR -8 254 28 1985 151 10 0 chr5 38190952 38191256 -161438894 - AluJb SINE Alu -3 309 3 1257 183 28 0 chr5 38191287 38191500 -161438650 - MER20 DNA MER1_type 0 219 1 1305 167 139 0 chr5 38191508 38191789 -161438361 - MER33 DNA MER1_type 0 324 5 2332 178 23 16 chr5 38191860 38192288 -161437862 - LTR3 LTR ERVK 0 432 2 1623 138 73 4 chr5 38192288 38192549 -161437601 - AluSx SINE Alu -33 279 1 303 154 39 0 chr5 38193119 38193171 -161436979 - MER66A LTR ERV1 -141 337 284 198 231 154 77 chr5 38193258 38193401 -161436749 - L2 LINE L2 0 3313 3160 246 265 48 24 chr5 38193500 38193583 -161436567 - L2 LINE L2 -220 3052 2968 313 142 52 0 chr5 38193839 38193911 -161436239 - LTR12 LTR ERV1 -294 2144 352 196 325 38 12 chr5 38194450 38194530 -161435620 - MIR3 SINE MIR -15 193 112 467 286 170 6 chr5 38194542 38194713 -161435437 - MIR SINE MIR -2 260 62 1444 197 48 7 chr5 38195356 38195645 -161434505 + AluJb SINE Alu 1 301 -11 2380 83 0 7 chr5 38195719 38196019 -161434131 + AluSx SINE Alu 1 298 -14 450 187 0 0 chr5 38196019 38196110 -161434040 + (TA)n Simple_repeat Simple_repeat 1 91 0 420 20 0 0 chr5 38196101 38196150 -161434000 + (TG)n Simple_repeat Simple_repeat 2 50 0 * 483 135 0 0 chr5 38196851 38196925 -161433225 + L1MA10 LINE L1 6254 6327 -7 263 321 71 65 chr5 38197473 38197641 -161432509 - MIR SINE MIR -79 183 15 1004 274 87 27 chr5 38197818 38198380 -161431770 - L2 LINE L2 -4 3309 2698 1676 230 40 44 chr5 38198384 38198980 -161431170 + L1MC5 LINE L1 6923 7516 -445 504 218 125 36 chr5 38199039 38199287 -161430863 + L1MC5 LINE L1 7644 7913 -48 533 290 59 21 chr5 38199298 38199536 -161430614 - L2 LINE L2 -611 2703 2457 405 213 197 16 chr5 38199932 38200059 -161430091 - MIR SINE MIR 0 262 113 273 325 147 45 chr5 38201216 38201481 -161428669 - L2 LINE L2 0 3272 2981 915 154 0 0 chr5 38201498 38201628 -161428522 - FLAM_C SINE Alu -3 130 1 2611 124 8 3 chr5 38202185 38202547 -161427603 - THE1B LTR MaLR 0 364 1 2141 108 4 0 chr5 38202692 38202970 -161427180 + AluSx SINE Alu 1 279 -33 441 0 0 0 chr5 38204847 38204896 -161425254 + (CA)n Simple_repeat Simple_repeat 2 50 0 2277 106 0 13 chr5 38205515 38205827 -161424323 + AluSc SINE Alu 1 308 -1 2217 93 14 0 chr5 38206445 38206734 -161423416 - AluSx SINE Alu -15 297 5 1988 101 49 3 chr5 38207567 38207853 -161422297 - AluSq SINE Alu -14 299 1 544 237 34 8 chr5 38208162 38208280 -161421870 + L2 LINE L2 3188 3308 -5 369 0 0 0 chr5 38208418 38208459 -161421691 + (CA)n Simple_repeat Simple_repeat 2 42 0 1865 151 16 16 chr5 38208556 38208868 -161421282 + AluJb SINE Alu 1 312 0 6030 162 46 18 chr5 38209322 38210317 -161419833 + L1 LINE L1 3239 4274 -1872 306 50 0 0 chr5 38210317 38210357 -161419793 + (CA)n Simple_repeat Simple_repeat 1 40 0 6030 162 46 18 chr5 38210357 38210557 -161419593 + L1 LINE L1 4274 4467 -1679 1084 231 61 95 chr5 38210964 38211257 -161418893 + L1MC4 LINE L1 7537 7806 -236 1450 189 63 14 chr5 38211257 38211380 -161418770 + AluJb SINE Alu 1 116 -196 189 0 0 0 chr5 38211380 38211401 -161418749 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1450 189 63 14 chr5 38211401 38211562 -161418588 + AluJb SINE Alu 116 299 -13 1084 231 61 95 chr5 38211562 38211792 -161418358 + L1MC4 LINE L1 7806 8042 0 631 290 11 11 chr5 38211805 38211988 -161418162 + MIR SINE MIR 20 202 -60 180 0 0 0 chr5 38212162 38212182 -161417968 + (A)n Simple_repeat Simple_repeat 1 20 0 222 118 0 0 chr5 38212408 38212442 -161417708 + (TATG)n Simple_repeat Simple_repeat 2 35 0 337 374 8 0 chr5 38213337 38213460 -161416690 + MER5A DNA MER1_type 63 186 -3 1480 162 4 4 chr5 38213768 38214003 -161416147 + MLT1A1 LTR MaLR 12 246 -119 219 337 63 44 chr5 38215530 38215627 -161414523 - MIR SINE MIR -2 260 166 2164 80 0 0 chr5 38215627 38215901 -161414249 - AluSc SINE Alu -1 308 35 219 337 63 44 chr5 38215901 38215961 -161414189 - MIR SINE MIR -96 166 109 2201 122 10 0 chr5 38215961 38216264 -161413886 + AluJb SINE Alu 1 306 -6 219 337 63 44 chr5 38216264 38216357 -161413793 - MIR SINE MIR -153 109 4 308 325 88 9 chr5 38216424 38216538 -161413612 - MIR SINE MIR -118 144 22 543 228 69 73 chr5 38216560 38216579 -161413571 + MIR SINE MIR 22 40 -222 593 219 50 8 chr5 38216579 38216698 -161413452 - FLAM_A SINE Alu -8 125 2 543 228 69 73 chr5 38216698 38216911 -161413239 + MIR SINE MIR 40 253 -9 721 274 51 8 chr5 38217032 38217266 -161412884 + MIR SINE MIR 12 255 -7 822 339 78 42 chr5 38218480 38219226 -161410924 - L2 LINE L2 -263 3009 2243 191 254 16 16 chr5 38219442 38219505 -161410645 + MIR SINE MIR 199 261 -1 326 283 88 103 chr5 38219654 38220248 -161409902 + L1MC4a LINE L1 5326 5910 -1898 964 175 88 28 chr5 38220442 38220659 -161409491 + MIR SINE MIR 12 241 -21 423 141 0 0 chr5 38220666 38220744 -161409406 + (ATG)n Simple_repeat Simple_repeat 2 79 0 394 229 0 76 chr5 38220862 38220967 -161409183 - L3 LINE CR1 -100 1477 1381 738 260 85 30 chr5 38220972 38221207 -161408943 + MIR SINE MIR 12 259 -3 248 240 190 20 chr5 38222206 38222306 -161407844 + MIR SINE MIR 19 135 -73 701 316 76 40 chr5 38222308 38222678 -161407472 - L2 LINE L2 0 3272 2890 334 191 0 0 chr5 38222832 38222895 -161407255 + MER103 DNA DNA 33 95 -71 1998 123 17 3 chr5 38222901 38223201 -161406949 + AluSx SINE Alu 1 304 -8 882 122 0 36 chr5 38223281 38223420 -161406730 - AluJo SINE Alu -178 134 1 800 195 130 35 chr5 38223742 38223973 -161406177 + MIR SINE MIR 10 262 0 1999 117 7 11 chr5 38225405 38225717 -161404433 + AluSc SINE Alu 1 311 0 1504 149 4 8 chr5 38225908 38226149 -161404001 - Tigger2 DNA MER2_type 0 2718 2479 934 166 11 11 chr5 38226150 38226325 -161403825 + AluJb SINE Alu 137 311 -1 4310 147 48 8 chr5 38226396 38227112 -161403038 - Tigger2 DNA MER2_type -1974 744 1 208 268 197 39 chr5 38227247 38227277 -161402873 - MIR3 SINE MIR -58 150 126 2408 96 3 0 chr5 38227277 38227589 -161402561 + AluSp SINE Alu 1 313 0 208 268 197 39 chr5 38227589 38227685 -161402465 - MIR3 SINE MIR -82 126 4 1969 116 32 3 chr5 38227938 38228222 -161401928 + AluSq SINE Alu 1 292 -21 2098 116 16 3 chr5 38229120 38229423 -161400727 - L1MC1 LINE L1 -18 6315 6009 1699 151 30 39 chr5 38229761 38230066 -161400084 - AluJo SINE Alu -10 302 1 2330 102 0 0 chr5 38230114 38230409 -161399741 + AluSc SINE Alu 1 295 -14 2264 103 0 13 chr5 38231747 38232057 -161398093 - AluSx SINE Alu -6 306 1 1940 172 0 0 chr5 38232157 38232459 -161397691 + AluJo SINE Alu 1 302 -10 191 291 152 0 chr5 38232544 38232623 -161397527 - L2 LINE L2 -2 3311 3221 276 254 40 79 chr5 38233090 38233216 -161396934 + MER20 DNA MER1_type 80 200 -19 22 0 0 0 chr5 38233324 38233346 -161396804 + AT_rich Low_complexity Low_complexity 1 22 0 526 160 319 14 chr5 38233706 38233850 -161396300 - MER5A DNA MER1_type 0 189 2 2359 77 24 3 chr5 38233973 38234270 -161395880 - AluSp SINE Alu -10 303 1 302 324 199 12 chr5 38235735 38236062 -161394088 + L2 LINE L2 2061 2448 -866 2270 119 0 0 chr5 38236220 38236523 -161393627 - AluSx SINE Alu -3 309 7 236 320 0 13 chr5 38236882 38236957 -161393193 + L2 LINE L2 3238 3311 -2 245 383 62 8 chr5 38237116 38237244 -161392906 + MIR3 SINE MIR 38 172 -36 24 0 0 0 chr5 38238481 38238505 -161391645 + AT_rich Low_complexity Low_complexity 1 24 0 2166 104 0 7 chr5 38238521 38238809 -161391341 + AluSq SINE Alu 3 288 -25 281 269 64 39 chr5 38238874 38238952 -161391198 + MIR SINE MIR 24 103 -105 623 172 0 78 chr5 38239695 38239823 -161390327 - FLAM_A SINE Alu -11 122 5 787 258 60 20 chr5 38240007 38240259 -161389891 + MIR SINE MIR 1 262 0 22 35 0 0 chr5 38240353 38240382 -161389768 + AT_rich Low_complexity Low_complexity 1 29 0 241 269 115 46 chr5 38240835 38240965 -161389185 + MIR SINE MIR 14 152 -110 250 357 24 12 chr5 38242464 38242548 -161387602 + L2 LINE L2 3170 3254 -18 2271 81 0 26 chr5 38243157 38243464 -161386686 + AluSg SINE Alu 1 299 -11 1368 158 68 43 chr5 38243835 38244114 -161386036 + AluJo SINE Alu 1 286 -26 1875 117 3 81 chr5 38244774 38245108 -161385042 + AluJb SINE Alu 1 308 -4 330 113 0 70 chr5 38245193 38245264 -161384886 - L1PA16 LINE L1 0 6166 6101 232 304 112 16 chr5 38245866 38245991 -161384159 + L2 LINE L2 3158 3294 -19 394 276 233 55 chr5 38246278 38246626 -161383524 - L2 LINE L2 -13 3300 2891 1483 167 99 8 chr5 38246687 38246950 -161383200 - AluSx SINE Alu -25 287 1 1974 121 3 16 chr5 38247433 38247746 -161382404 + AluSp SINE Alu 1 309 -4 2125 105 6 19 chr5 38249082 38249397 -161380753 - AluSq SINE Alu -2 311 1 569 218 24 8 chr5 38249400 38249524 -161380626 - FLAM_A SINE Alu -6 127 2 2406 81 7 0 chr5 38251845 38252153 -161377997 - AluSp SINE Alu -3 310 1 1814 139 21 3 chr5 38253577 38253865 -161376285 - AluJo SINE Alu -19 293 1 271 313 48 62 chr5 38254819 38254965 -161375185 + MIR SINE MIR 8 149 -59 374 275 105 91 chr5 38255110 38255615 -161374535 + L1M2 LINE L1 896 1407 -5442 2401 74 0 7 chr5 38257958 38258256 -161371894 + AluSc SINE Alu 1 296 -13 959 212 132 99 chr5 38258305 38258829 -161371321 - MLT1F LTR MaLR 0 542 2 211 53 26 26 chr5 38259085 38259123 -161371027 + (TTTTA)n Simple_repeat Simple_repeat 1 38 0 1773 134 0 27 chr5 38259136 38259398 -161370752 - AluSx SINE Alu -57 255 1 2097 141 0 7 chr5 38260044 38260350 -161369800 - AluSx SINE Alu -8 304 1 425 351 48 19 chr5 38260906 38261114 -161369036 + MIR SINE MIR 2 215 -47 1685 164 45 3 chr5 38262142 38262428 -161367722 - AluJo SINE Alu -14 298 1 2294 114 0 0 chr5 38262559 38262865 -161367285 - AluSq SINE Alu -2 311 6 1979 122 11 11 chr5 38263630 38263917 -161366233 - AluSx SINE Alu -25 287 1 567 252 224 14 chr5 38264008 38264222 -161365928 - MIR SINE MIR -2 260 2 24 0 0 0 chr5 38264830 38264854 -161365296 + AT_rich Low_complexity Low_complexity 1 24 0 337 198 99 0 chr5 38264855 38264956 -161365194 - Charlie8 DNA MER1_type -2262 155 45 2763 13 0 0 chr5 38265081 38265384 -161364766 - AluYb8 SINE Alu -15 303 1 198 0 0 0 chr5 38267019 38267041 -161363109 + (TTTAA)n Simple_repeat Simple_repeat 3 24 0 1453 193 0 82 chr5 38267041 38267347 -161362803 - AluJb SINE Alu -29 283 3 2396 106 0 0 chr5 38267382 38267693 -161362457 - AluSx SINE Alu -1 311 1 1665 250 113 66 chr5 38268392 38268615 -161361535 - L1MC4 LINE L1 0 8042 7831 2458 77 3 0 chr5 38268615 38268912 -161361238 + AluSp SINE Alu 2 299 -14 1665 250 113 66 chr5 38268912 38269803 -161360347 - L1MC4 LINE L1 -211 7831 6876 2102 134 0 0 chr5 38270915 38271205 -161358945 - AluSx SINE Alu -22 290 1 880 244 105 54 chr5 38273244 38273867 -161356283 - L1M4 LINE L1 -970 5176 4522 2524 246 107 36 chr5 38273883 38274412 -161355738 + L1MC4 LINE L1 6448 6938 -1104 2298 90 7 0 chr5 38274412 38274702 -161355448 + AluSg SINE Alu 1 292 -18 2524 246 107 36 chr5 38274702 38275489 -161354661 + L1MC4 LINE L1 6938 7949 -93 204 293 0 0 chr5 38276274 38276332 -161353818 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 260 262 144 10 chr5 38277114 38277215 -161352935 - MIR SINE MIR -61 147 39 2075 114 10 3 chr5 38277353 38277651 -161352499 - AluSg SINE Alu -10 300 1 259 271 125 21 chr5 38277719 38277815 -161352335 - MIR3 SINE MIR -48 160 55 279 0 0 0 chr5 38277951 38277982 -161352168 + (TG)n Simple_repeat Simple_repeat 2 32 0 2269 100 0 3 chr5 38278700 38278990 -161351160 + AluSg SINE Alu 1 289 -21 1898 149 10 7 chr5 38279097 38279393 -161350757 - AluSx SINE Alu -14 298 2 24 0 0 0 chr5 38281009 38281033 -161349117 + AT_rich Low_complexity Low_complexity 1 24 0 2829 10 0 0 chr5 38281603 38281911 -161348239 + AluYa5 SINE Alu 1 308 -3 269 339 72 33 chr5 38283779 38283959 -161346191 - MIR3 SINE MIR -6 202 16 477 267 54 70 chr5 38283966 38284224 -161345926 + L1ME3A LINE L1 4644 4897 -1249 317 266 161 12 chr5 38284253 38284501 -161345649 + L1ME3A LINE L1 4993 5277 -869 1241 133 258 24 chr5 38284554 38284891 -161345259 - Charlie1 DNA MER1_type 0 2761 2346 324 164 60 0 chr5 38284889 38284956 -161345194 - Charlie1 DNA MER1_type -2690 71 1 * 265 273 188 0 chr5 38285074 38285239 -161344911 + L1ME3A LINE L1 5461 5656 -506 345 252 107 0 chr5 38285245 38285348 -161344802 + MER5A DNA MER1_type 7 120 -69 419 259 97 16 chr5 38285395 38285641 -161344509 + L1ME3A LINE L1 5653 5925 -237 22 0 0 0 chr5 38285773 38285795 -161344355 + AT_rich Low_complexity Low_complexity 1 22 0 772 251 236 10 chr5 38286001 38286416 -161343734 + MLT1J LTR MaLR 3 511 0 362 292 167 12 chr5 38286504 38286672 -161343478 + MIR SINE MIR 54 247 -15 1731 135 53 11 chr5 38286804 38287086 -161343064 - AluSx SINE Alu -18 294 1 301 304 65 14 chr5 38287508 38287646 -161342504 + L3 LINE CR1 1355 1499 -78 1955 141 10 20 chr5 38287745 38288050 -161342100 - AluSx SINE Alu -10 302 1 8244 195 35 64 chr5 38288050 38288346 -161341804 - L1 LINE L1 -3104 3744 3441 7397 135 25 18 chr5 38288346 38288428 -161341722 - HSMAR2 DNA Mariner -2 1300 1220 1946 119 32 0 chr5 38288428 38288713 -161341437 + AluSx SINE Alu 1 294 -18 7397 135 25 18 chr5 38288713 38289921 -161340229 - HSMAR2 DNA Mariner -82 1220 1 8244 195 35 64 chr5 38289921 38290068 -161340082 - L1 LINE L1 -3407 3441 3291 1842 183 10 0 chr5 38290068 38290374 -161339776 - AluJo SINE Alu -3 309 1 8244 195 35 64 chr5 38290374 38290703 -161339447 - L1 LINE L1 -3557 3291 2954 1785 199 0 0 chr5 38290703 38291000 -161339150 - AluJo SINE Alu -15 297 1 8244 195 35 64 chr5 38291000 38291140 -161339010 - L1 LINE L1 -3894 2954 2811 219 69 0 0 chr5 38291140 38291169 -161338981 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 1980 155 0 0 chr5 38291169 38291460 -161338690 - AluSx SINE Alu -21 291 1 8244 195 35 64 chr5 38291460 38293195 -161336955 - L1 LINE L1 -4036 2812 1187 3909 128 12 94 chr5 38293195 38293756 -161336394 + LTR8 LTR ERV1 1 486 -205 2458 73 0 10 chr5 38293756 38294069 -161336081 + AluY SINE Alu 2 311 0 3909 128 12 94 chr5 38294069 38294260 -161335890 + LTR8 LTR ERV1 486 691 0 8244 195 35 64 chr5 38294260 38294584 -161335566 - L1 LINE L1 -5661 1187 855 410 230 23 0 chr5 38295030 38295117 -161335033 - MER115 DNA AcHobo -447 246 158 2325 201 29 10 chr5 38295188 38295705 -161334445 - MER34 LTR ERV1 -4 538 12 216 158 0 0 chr5 38296481 38296519 -161333631 + GA-rich Low_complexity Low_complexity 2 39 0 281 287 70 23 chr5 38296638 38296767 -161333383 - MLT1L LTR MaLR -434 181 47 584 223 27 80 chr5 38297233 38297342 -161332808 + MER45A DNA AcHobo 1 97 -1484 4468 36 0 0 chr5 38297342 38297874 -161332276 - L1PA5 LINE L1 -2 6152 5621 584 223 27 80 chr5 38297874 38297952 -161332198 + MER45A DNA AcHobo 97 178 0 2767 64 0 43 chr5 38298089 38298280 -161331870 - L1PB1 LINE L1 0 6151 5984 2245 123 0 0 chr5 38298280 38298581 -161331569 - AluSx SINE Alu -11 301 1 2767 64 0 43 chr5 38298581 38298782 -161331368 - L1PB1 LINE L1 -167 5984 5776 21 0 0 0 chr5 38299220 38299241 -161330909 + AT_rich Low_complexity Low_complexity 1 21 0 369 332 123 23 chr5 38299262 38299482 -161330668 - L2 LINE L2 0 3272 3031 415 104 0 0 chr5 38299571 38299638 -161330512 - AluSp/q SINE Alu -7 306 240 864 258 188 12 chr5 38299823 38300307 -161329843 + L1MC4a LINE L1 5598 6166 -1642 1403 113 16 61 chr5 38300522 38300769 -161329381 + MER46A DNA MER2_type 1 236 0 529 302 86 33 chr5 38301970 38302215 -161327935 - MIR SINE MIR 0 262 5 330 206 82 10 chr5 38302992 38303089 -161327061 - Charlie7 DNA MER1_type -2504 108 5 944 196 186 53 chr5 38303757 38304079 -161326071 + MLT1A1 LTR MaLR 1 365 0 2520 70 0 13 chr5 38304121 38304460 -161325690 - AluY SINE Alu 0 337 3 337 308 99 29 chr5 38304756 38304928 -161325222 + MER5A DNA MER1_type 4 187 -2 2233 101 7 0 chr5 38305294 38305581 -161324569 - AluSc SINE Alu -20 289 1 487 266 6 57 chr5 38306936 38307094 -161323056 - MER5A DNA MER1_type -22 167 18 198 0 0 0 chr5 38307685 38307707 -161322443 + (TGG)n Simple_repeat Simple_repeat 2 23 0 646 234 63 0 chr5 38307749 38307907 -161322243 - MER5B DNA MER1_type -10 168 1 486 251 64 61 chr5 38309019 38309199 -161320951 - MIR SINE MIR -48 214 31 186 313 31 0 chr5 38309858 38309922 -161320228 - L2 LINE L2 -1 3312 3247 338 241 13 13 chr5 38309937 38310016 -161320134 - MIR SINE MIR -28 234 156 619 212 130 7 chr5 38310016 38310162 -161319988 - FRAM SINE Alu -13 163 1 238 281 73 10 chr5 38310467 38310563 -161319587 - L1ME4a LINE L1 -30 6091 5990 283 267 96 14 chr5 38310603 38310749 -161319401 - L1ME4a LINE L1 -205 5916 5759 739 246 31 36 chr5 38312358 38312553 -161317597 - MIR SINE MIR -61 201 8 429 239 0 72 chr5 38312730 38312868 -161317282 - MIR SINE MIR -1 261 134 622 231 82 14 chr5 38312959 38313169 -161316981 - MIR SINE MIR -1 261 32 28 71 0 0 chr5 38314428 38314484 -161315666 + AT_rich Low_complexity Low_complexity 1 56 0 4012 206 83 66 chr5 38314727 38316286 -161313864 + L1MC/D LINE L1 3444 5028 -1118 1300 200 4 39 chr5 38316350 38316605 -161313545 + AluJo SINE Alu 43 288 -24 27 0 0 0 chr5 38316837 38316864 -161313286 + AT_rich Low_complexity Low_complexity 1 27 0 329 252 122 23 chr5 38316949 38317080 -161313070 + L1MC/D LINE L1 5673 5816 -1992 2352 104 0 0 chr5 38317092 38317399 -161312751 + AluSx SINE Alu 1 307 -5 228 242 33 22 chr5 38318143 38318234 -161311916 + L1M4 LINE L1 784 875 -5667 979 174 101 9 chr5 38318298 38318516 -161311634 + L1MCa LINE L1 19 256 -6170 695 156 78 0 chr5 38318518 38318685 -161311465 + L1MCa LINE L1 1800 1979 -4447 7486 196 55 72 chr5 38318687 38318888 -161311262 + L1MCa LINE L1 2092 2295 -4131 960 206 0 0 chr5 38318888 38319053 -161311097 + FRAM SINE Alu 1 165 -1 7486 196 55 72 chr5 38319053 38319585 -161310565 + L1MCa LINE L1 2295 2834 -3592 3127 79 56 7 chr5 38319585 38320017 -161310133 - MLT2A2 LTR ERVL 0 453 1 7486 196 55 72 chr5 38320017 38321100 -161309050 + L1MCa LINE L1 2834 3933 -2493 1551 72 5 0 chr5 38321100 38321307 -161308843 + L1PA7 LINE L1 5943 6150 -4 7486 196 55 72 chr5 38321307 38321720 -161308430 + L1MCa LINE L1 3933 4351 -2075 2418 109 0 0 chr5 38321720 38322033 -161308117 - AluSq SINE Alu 0 313 1 7486 196 55 72 chr5 38322033 38322529 -161307621 + L1MCa LINE L1 4351 4764 -1662 758 189 8 0 chr5 38322529 38322656 -161307494 + FLAM_A SINE Alu 1 128 -5 7486 196 55 72 chr5 38322656 38322942 -161307208 + L1MCa LINE L1 4764 5053 -1373 3685 152 33 9 chr5 38322942 38323631 -161306519 + L1PB4 LINE L1 5437 6142 -14 2241 66 0 24 chr5 38324026 38324315 -161305835 + AluSc SINE Alu 1 282 -27 1377 158 68 43 chr5 38324706 38324985 -161305165 + AluJo SINE Alu 1 286 -26 2198 102 14 0 chr5 38325645 38325938 -161304212 + AluSx SINE Alu 1 297 -15 566 122 22 0 chr5 38326745 38326835 -161303315 - AluS SINE Alu -221 92 1 3853 182 23 47 chr5 38326843 38326932 -161303218 - L1MB8 LINE L1 -9 6169 6079 2064 119 3 14 chr5 38326932 38327225 -161302925 + AluSx SINE Alu 1 290 -22 3853 182 23 47 chr5 38327225 38328198 -161301952 - L1MB8 LINE L1 -99 6079 5136 252 365 116 19 chr5 38328244 38328848 -161301302 - L2 LINE L2 -337 2977 2304 1070 232 157 11 chr5 38328850 38329220 -161300930 - LTR16A LTR ERVL 0 450 27 199 316 13 82 chr5 38329253 38329411 -161300739 - L2 LINE L2 -1015 2299 2153 670 273 57 13 chr5 38329428 38329655 -161300495 - MLT1L LTR MaLR -11 604 368 2013 209 85 86 chr5 38329745 38330521 -161299629 - MER21B LTR ERV1 -69 794 20 475 196 0 22 chr5 38330544 38330636 -161299514 - MER21B LTR ERV1 -773 90 1 333 211 193 25 chr5 38330760 38330921 -161299229 - MLT1L LTR MaLR -427 188 1 332 317 56 60 chr5 38330946 38331230 -161298920 - L2 LINE L2 -1230 2084 1802 802 225 25 21 chr5 38331291 38331527 -161298623 + L1ME1 LINE L1 5930 6166 0 2185 123 3 3 chr5 38331834 38332134 -161298016 - AluSx SINE Alu -12 300 1 3553 129 7 0 chr5 38332346 38332921 -161297229 + L1MA4 LINE L1 5442 6020 -280 3253 160 33 0 chr5 38333016 38333555 -161296595 + MER41D LTR ERV1 1 557 0 1586 88 23 0 chr5 38333910 38334125 -161296025 + L1PA16 LINE L1 5935 6154 -12 1545 78 0 0 chr5 38334127 38334339 -161295811 - AluY SINE Alu 0 306 95 8362 65 3 7 chr5 38334339 38335414 -161294736 - MER11C LTR ERVK -1 1070 1 737 129 0 0 chr5 38335414 38335515 -161294635 - AluY SINE Alu -210 101 1 187 269 65 54 chr5 38335593 38335686 -161294464 - L2 LINE L2 -17 3296 3203 1373 81 24 89 chr5 38335967 38336213 -161293937 - MER30 DNA MER1_type 0 230 1 268 241 19 0 chr5 38336217 38336271 -161293879 - MIR3 SINE MIR -48 160 106 30 0 0 0 chr5 38336522 38336552 -161293598 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr5 38336651 38336674 -161293476 + AT_rich Low_complexity Low_complexity 1 23 0 4364 161 36 35 chr5 38336678 38336989 -161293161 - L1MB4 LINE L1 -29 6151 5842 2765 16 0 6 chr5 38336989 38337300 -161292850 - AluYb8 SINE Alu -9 309 1 4364 161 36 35 chr5 38337300 38337916 -161292234 - L1MB4 LINE L1 -338 5842 5229 2069 123 7 3 chr5 38337916 38338209 -161291941 - AluSp SINE Alu -19 294 1 4364 161 36 35 chr5 38338209 38338732 -161291418 - L1MB4 LINE L1 -951 5229 4708 652 309 56 48 chr5 38339629 38339915 -161290235 - L2 LINE L2 -980 2334 2041 2968 173 117 12 chr5 38339915 38340573 -161289577 - LTR8A LTR ERV1 0 727 1 652 309 56 48 chr5 38340573 38340749 -161289401 - L2 LINE L2 -1273 2041 1868 2059 138 3 0 chr5 38340960 38341251 -161288899 + AluSx SINE Alu 1 292 -20 1007 155 57 5 chr5 38341855 38342047 -161288103 + Tigger3b DNA MER2_type 1 202 -1029 4626 110 31 32 chr5 38342047 38342703 -161287447 + MER4E LTR ERV1 1 657 -122 4007 108 1 66 chr5 38342703 38343261 -161286889 + MER41B LTR ERV1 1 509 -126 2190 120 3 10 chr5 38343261 38343570 -161286580 - AluSx SINE Alu -5 307 1 4007 108 1 66 chr5 38343570 38343690 -161286460 + MER41B LTR ERV1 509 635 0 4626 110 31 32 chr5 38343690 38343813 -161286337 + MER4E LTR ERV1 657 779 0 4325 113 42 47 chr5 38343813 38344661 -161285489 + Tigger3b DNA MER2_type 199 1041 -190 2805 116 45 4 chr5 38344661 38345128 -161285022 + LTR19A LTR ERV1 1 486 0 1101 179 0 0 chr5 38345128 38345302 -161284848 + Tigger3b DNA MER2_type 1037 1210 -22 245 231 21 54 chr5 38346378 38346564 -161283586 + (TTA)n Simple_repeat Simple_repeat 1 180 0 2022 119 31 7 chr5 38346612 38346906 -161283244 + AluSx SINE Alu 1 301 -11 408 293 200 46 chr5 38347982 38348965 -161281185 - L2 LINE L2 -455 2859 1725 386 309 40 63 chr5 38348975 38349199 -161280951 - MIR3 SINE MIR -36 226 9 186 360 30 10 chr5 38349270 38349370 -161280780 - L2 LINE L2 -528 2786 2685 336 198 69 60 chr5 38349469 38349585 -161280565 - MER113 DNA MER1_type? -83 438 322 486 71 200 0 chr5 38349597 38349667 -161280483 - AluSg/x SINE Alu -20 292 209 1423 110 0 0 chr5 38349966 38350148 -161280002 - AluSx SINE Alu -129 183 2 897 236 86 30 chr5 38350157 38350365 -161279785 - MER113 DNA MER1_type? -198 323 91 2442 71 0 16 chr5 38350365 38350675 -161279475 + AluY SINE Alu 1 305 -6 897 236 86 30 chr5 38350675 38350767 -161279383 - MER113 DNA MER1_type? -430 91 6 637 292 66 25 chr5 38350929 38351398 -161278752 - MLT1L LTR MaLR -8 607 97 293 330 186 35 chr5 38351822 38353237 -161276913 + L2 LINE L2 462 2144 -1170 2149 106 3 3 chr5 38353237 38353554 -161276596 - AluSx SINE Alu 0 317 1 293 330 186 35 chr5 38353554 38353722 -161276428 + L2 LINE L2 2144 2285 -1029 2181 126 12 0 chr5 38353741 38354066 -161276084 + MER47A DNA MER2_type 38 366 0 894 222 141 0 chr5 38354324 38354522 -161275628 + MIR SINE MIR 21 246 -16 212 387 120 20 chr5 38354731 38354821 -161275329 + L2 LINE L2 3102 3182 -90 558 113 0 0 chr5 38354821 38354901 -161275249 - MADE1 DNA Mariner 0 80 1 212 387 120 20 chr5 38354901 38354960 -161275190 + L2 LINE L2 3182 3266 -6 1485 192 105 19 chr5 38355328 38355651 -161274499 + MLT1A1 LTR MaLR 1 351 -14 445 305 23 15 chr5 38357465 38357596 -161272554 + MER5B DNA MER1_type 15 146 -32 2131 103 14 0 chr5 38358091 38358398 -161271752 - AluSx SINE Alu 0 311 1 22 35 0 0 chr5 38358729 38358758 -161271392 + AT_rich Low_complexity Low_complexity 1 29 0 811 263 144 41 chr5 38358809 38359172 -161270978 - L1MC4a LINE L1 -95 6026 5603 2517 121 100 5 chr5 38359172 38359561 -161270589 - MSTB LTR MaLR 0 426 1 811 263 144 41 chr5 38359561 38359661 -161270489 - L1MC4a LINE L1 -518 5603 5515 2185 175 3 14 chr5 38359876 38360231 -161269919 + MLT1A1 LTR MaLR 11 361 -4 244 267 0 0 chr5 38360500 38360545 -161269605 - MIR SINE MIR -195 67 23 2501 145 25 37 chr5 38360609 38361044 -161269106 + MSTB1 LTR MaLR 1 430 -2 1938 151 0 3 chr5 38362187 38362472 -161267678 + AluSx SINE Alu 1 284 -28 2166 104 0 23 chr5 38363271 38363578 -161266572 + AluSg SINE Alu 1 300 -10 2158 128 0 0 chr5 38364065 38364354 -161265796 + AluSx SINE Alu 15 303 -9 27 0 0 0 chr5 38364465 38364492 -161265658 + AT_rich Low_complexity Low_complexity 1 27 0 2223 91 19 3 chr5 38364535 38364789 -161265361 + L1PB3 LINE L1 5534 5795 -359 378 0 0 0 chr5 38364789 38364831 -161265319 + (CA)n Simple_repeat Simple_repeat 2 43 0 2223 91 19 3 chr5 38364831 38364885 -161265265 + L1PB3 LINE L1 5795 5847 -307 1610 95 95 0 chr5 38364891 38365113 -161265037 + L1PB3 LINE L1 5912 6154 0 273 128 0 0 chr5 38365113 38365160 -161264990 + (TA)n Simple_repeat Simple_repeat 2 48 0 733 173 59 47 chr5 38366057 38366254 -161263896 + MLT1B LTR MaLR 1 185 -189 2222 96 14 3 chr5 38366383 38366676 -161263474 + AluSx SINE Alu 5 300 -12 2299 103 0 3 chr5 38367051 38367352 -161262798 + AluSg SINE Alu 5 304 -6 225 311 0 44 chr5 38367490 38367580 -161262570 + MIR SINE MIR 69 154 -108 655 320 112 3 chr5 38367911 38368214 -161261936 + L2 LINE L2 2935 3270 -2 186 176 0 0 chr5 38368305 38368356 -161261794 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 2392 101 0 0 chr5 38368443 38368749 -161261401 + AluSx SINE Alu 1 306 -6 2251 216 68 44 chr5 38369102 38369630 -161260520 + MER87 LTR ERV1 1 541 0 279 361 21 0 chr5 38370114 38370211 -161259939 + MIR SINE MIR 46 144 -118 1821 129 46 26 chr5 38370212 38370514 -161259636 + THE1B LTR MaLR 1 308 -56 35725 37 1 6 chr5 38370514 38375642 -161254508 + L1PA3 LINE L1 1053 6155 0 204 125 0 0 chr5 38375653 38375685 -161254465 + (A)n Simple_repeat Simple_repeat 1 32 0 231 114 0 0 chr5 38376071 38376106 -161254044 + (A)n Simple_repeat Simple_repeat 1 35 0 516 83 0 14 chr5 38376106 38376178 -161253972 + THE1B LTR MaLR 304 374 -1 324 253 0 13 chr5 38376205 38376284 -161253866 + MIR SINE MIR 166 243 -19 1914 153 3 0 chr5 38376767 38377098 -161253052 - AluSx SINE Alu 0 332 1 374 281 102 83 chr5 38377342 38377592 -161252558 - MARNA DNA Mariner -9 577 333 2236 100 3 7 chr5 38377592 38377901 -161252249 + AluSp SINE Alu 1 308 -5 374 281 102 83 chr5 38377901 38377999 -161252151 - MARNA DNA Mariner -253 333 238 2158 131 0 10 chr5 38377999 38378313 -161251837 + AluSx SINE Alu 1 311 -1 374 281 102 83 chr5 38378313 38378493 -161251657 - MARNA DNA Mariner -348 238 38 254 343 88 22 chr5 38379935 38380116 -161250034 + L2 LINE L2 3065 3257 -15 180 0 0 0 chr5 38380194 38380214 -161249936 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 599 293 112 53 chr5 38380263 38380717 -161249433 - L1MEd LINE L1 -5099 1020 540 364 304 133 59 chr5 38380865 38381204 -161248946 - L1MEd LINE L1 -5733 386 23 558 0 0 0 chr5 38381464 38381526 -161248624 + (GA)n Simple_repeat Simple_repeat 1 62 0 2481 83 0 0 chr5 38383131 38383444 -161246706 + AluSq SINE Alu 1 313 0 310 277 149 0 chr5 38383872 38383978 -161246172 - MIR SINE MIR -67 141 36 215 211 19 19 chr5 38384077 38384129 -161246021 + MIR SINE MIR 22 73 -135 892 154 11 75 chr5 38384800 38384849 -161245301 - FRAM SINE Alu -136 40 145 2199 130 3 0 chr5 38384849 38385157 -161244993 - AluSx SINE Alu -3 309 1 892 154 11 75 chr5 38385157 38385295 -161244855 - FRAM SINE Alu -30 146 1 440 248 51 36 chr5 38386733 38386870 -161243280 - MARNA DNA Mariner -28 558 420 235 327 40 0 chr5 38386960 38387061 -161243089 + MARNA DNA Mariner 284 388 -198 666 62 0 0 chr5 38387067 38387147 -161243003 + MADE1 DNA Mariner 1 80 0 2427 92 0 6 chr5 38388699 38389013 -161241137 + AluSx SINE Alu 1 312 0 240 150 0 0 chr5 38389236 38389276 -161240874 - MIR SINE MIR -40 222 183 475 353 27 5 chr5 38390068 38390255 -161239895 + L3 LINE CR1 1339 1529 -48 276 100 0 0 chr5 38390405 38390445 -161239705 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1118 181 6 0 chr5 38390449 38390620 -161239530 - FAM SINE Alu -3 172 1 471 241 90 0 chr5 38390926 38391071 -161239079 + MER103 DNA DNA 8 165 -1 420 130 0 0 chr5 38392968 38393037 -161237113 + (GA)n Simple_repeat Simple_repeat 2 70 0 406 279 75 80 chr5 38394191 38394392 -161235758 - MIR3 SINE MIR -7 201 2 191 170 43 21 chr5 38394445 38394492 -161235658 - MIR3 SINE MIR 0 208 161 264 125 47 16 chr5 38395232 38395296 -161234854 + GA-rich Low_complexity Low_complexity 3 68 0 348 176 0 0 chr5 38395610 38395678 -161234472 + (TG)n Simple_repeat Simple_repeat 2 69 0 1031 201 0 0 chr5 38396437 38396601 -161233549 - AluJo/FRAM SINE Alu -2 300 137 1513 205 44 17 chr5 38396603 38396896 -161233254 - AluJb SINE Alu -1 301 1 236 232 127 146 chr5 38398210 38398477 -161231673 + L2 LINE L2 3052 3313 0 204 179 26 0 chr5 38398482 38398521 -161231629 + L2 LINE L2 3230 3269 -3 2522 71 0 0 chr5 38398662 38398971 -161231179 - AluY SINE Alu -2 309 1 412 303 46 17 chr5 38399370 38399545 -161230605 + MIR SINE MIR 29 208 -54 1760 187 3 16 chr5 38400061 38400366 -161229784 + AluJb SINE Alu 1 301 -11 570 230 118 29 chr5 38400366 38400570 -161229580 + MER20B DNA MER1_type 558 779 -4 305 159 16 0 chr5 38401029 38401092 -161229058 + GA-rich Low_complexity Low_complexity 2 65 0 264 308 0 28 chr5 38402639 38402746 -161227404 - L1ME LINE L1 -422 5699 5596 2392 64 30 0 chr5 38402805 38403103 -161227047 - AluSp SINE Alu -6 307 1 263 296 91 95 chr5 38406576 38406819 -161223331 + L2 LINE L2 3030 3271 -1 223 297 33 0 chr5 38406856 38406947 -161223203 + L3b LINE CR1 1374 1467 -116 25 83 0 0 chr5 38406960 38407020 -161223130 + AT_rich Low_complexity Low_complexity 1 60 0 358 252 141 0 chr5 38407117 38407252 -161222898 + L1ME LINE L1 5542 5695 -426 271 271 85 70 chr5 38409845 38409974 -161220176 + L2 LINE L2 3181 3311 -2 704 294 34 18 chr5 38410411 38410738 -161219412 + L1ME LINE L1 2173 2504 -3642 537 278 32 58 chr5 38410825 38411134 -161219016 + L1ME LINE L1 3715 4015 -2131 3254 144 46 34 chr5 38411146 38411737 -161218413 + MER39B LTR ERV1 56 653 0 613 300 64 11 chr5 38411753 38412033 -161218117 + L1ME LINE L1 4031 4325 -1821 1696 122 0 0 chr5 38412035 38412264 -161217886 + AluSx SINE Alu 1 229 -83 548 298 99 11 chr5 38412268 38412641 -161217509 + L1ME LINE L1 4411 4816 -1330 * 644 276 35 77 chr5 38412623 38413131 -161217019 + L1ME LINE L1 5318 5810 -352 1298 178 0 0 chr5 38418506 38418714 -161211436 - AluJb SINE Alu -20 292 85 327 288 42 34 chr5 38419177 38419295 -161210855 - MIR3 SINE MIR -32 176 58 195 114 0 0 chr5 38419766 38419801 -161210349 + (TA)n Simple_repeat Simple_repeat 1 35 0 491 235 209 0 chr5 38420903 38421056 -161209094 - MIR3 SINE MIR 0 208 24 302 261 150 0 chr5 38421651 38421773 -161208377 - MER5A DNA MER1_type 0 189 20 388 318 3 25 chr5 38425194 38425413 -161204737 + CT-rich Low_complexity Low_complexity 1 214 0 2613 50 0 0 chr5 38425426 38425727 -161204423 - AluY SINE Alu -10 301 1 449 206 103 73 chr5 38425745 38425910 -161204240 + MIR SINE MIR 29 198 -64 214 371 38 9 chr5 38426069 38426174 -161203976 + MIR SINE MIR 19 126 -82 386 250 74 9 chr5 38427918 38428026 -161202124 - MIR SINE MIR -128 134 20 217 271 51 76 chr5 38428152 38428270 -161201880 + MIR SINE MIR 81 195 -67 2110 100 11 0 chr5 38429226 38429506 -161200644 + AluSp SINE Alu 1 283 -30 328 300 43 26 chr5 38429972 38430205 -161199945 + L1MC5 LINE L1 7511 7747 -214 2002 153 6 6 chr5 38430255 38430568 -161199582 - AluSq SINE Alu 0 313 1 2148 110 0 10 chr5 38430568 38430867 -161199283 - AluSq SINE Alu -17 296 1 640 305 60 20 chr5 38432083 38432332 -161197818 - MIR SINE MIR 0 262 4 2518 150 17 0 chr5 38432432 38432845 -161197305 + L1MB5 LINE L1 5364 5783 -391 2165 125 0 3 chr5 38432847 38433142 -161197008 + AluSq SINE Alu 1 294 -19 727 244 83 20 chr5 38433151 38433173 -161196977 + L1MB5 LINE L1 5899 5918 -262 198 0 0 0 chr5 38433173 38433195 -161196955 + (TA)n Simple_repeat Simple_repeat 2 23 0 727 244 83 20 chr5 38433195 38433438 -161196712 + L1MB5 LINE L1 5918 6179 -1 41313 68 7 4 chr5 38433744 38439870 -161190280 + L1PA5 LINE L1 11 6152 -2 345 24 0 0 chr5 38440441 38440483 -161189667 + (CA)n Simple_repeat Simple_repeat 2 43 0 1136 178 0 49 chr5 38441064 38441289 -161188861 - MER20 DNA MER1_type -5 214 1 311 0 26 0 chr5 38441737 38441776 -161188374 + (CA)n Simple_repeat Simple_repeat 2 41 0 210 71 0 0 chr5 38442089 38442117 -161188033 + (TC)n Simple_repeat Simple_repeat 1 28 0 252 0 0 0 chr5 38442117 38442145 -161188005 + (TG)n Simple_repeat Simple_repeat 1 28 0 2324 116 0 0 chr5 38442176 38442486 -161187664 - AluSg SINE Alu 0 310 1 190 244 13 13 chr5 38442609 38442687 -161187463 + (TA)n Simple_repeat Simple_repeat 2 79 0 273 29 0 0 chr5 38445229 38445263 -161184887 + (TG)n Simple_repeat Simple_repeat 2 35 0 214 191 63 32 chr5 38445610 38445662 -161184488 + CT-rich Low_complexity Low_complexity 5 61 -8 2180 112 10 3 chr5 38445662 38445958 -161184192 - AluSg SINE Alu -12 298 1 324 0 0 0 chr5 38446091 38446127 -161184023 + (TG)n Simple_repeat Simple_repeat 1 36 0 298 360 14 0 chr5 38447426 38447573 -161182577 + (CA)n Simple_repeat Simple_repeat 2 150 0 386 231 68 17 chr5 38447860 38447977 -161182173 - MIR SINE MIR -109 153 31 23 33 0 0 chr5 38449030 38449060 -161181090 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr5 38449251 38449277 -161180873 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2567 58 0 6 chr5 38449467 38449780 -161180370 - AluY SINE Alu 0 311 1 343 242 99 50 chr5 38450010 38450171 -161179979 - MIR SINE MIR 0 262 94 1287 237 25 69 chr5 38452357 38452390 -161177760 - L1ME3A LINE L1 -22 6148 6115 2284 130 12 6 chr5 38452390 38452736 -161177414 + MER7A DNA MER2_type 1 346 0 1287 237 25 69 chr5 38452736 38453149 -161177001 - L1ME3A LINE L1 -55 6115 5722 1942 155 0 3 chr5 38453493 38453796 -161176354 - AluJb SINE Alu -9 303 2 279 320 10 93 chr5 38455225 38455277 -161174873 - MER5B DNA MER1_type 0 178 123 2152 145 3 0 chr5 38455277 38455588 -161174562 - AluSx SINE Alu 0 312 1 279 320 10 93 chr5 38455588 38455729 -161174421 - MER5B DNA MER1_type -55 123 1 601 216 101 0 chr5 38455971 38456119 -161174031 - MIR SINE MIR -28 234 72 228 276 58 23 chr5 38456119 38456206 -161173944 - MIR SINE MIR -165 97 8 263 257 29 29 chr5 38456461 38456566 -161173584 + MER5A DNA MER1_type 81 185 -4 290 265 49 103 chr5 38456810 38457163 -161172987 + MLT1I LTR MaLR 98 549 0 398 203 8 94 chr5 38457466 38457594 -161172556 - MIR3 SINE MIR 0 208 92 7468 136 34 5 chr5 38457895 38458563 -161171587 + Tigger3b DNA MER2_type 1 721 -2307 2236 94 0 29 chr5 38458563 38458871 -161171279 + AluSg SINE Alu 1 299 -11 7468 136 34 5 chr5 38458871 38459398 -161170752 + Tigger3b DNA MER2_type 721 1231 0 310 305 46 48 chr5 38459398 38459644 -161170506 + MLT1J2 LTR MaLR 155 436 -14 311 159 66 0 chr5 38460358 38460509 -161169641 + (TA)n Simple_repeat Simple_repeat 1 161 0 2033 125 0 7 chr5 38460509 38460796 -161169354 - AluSg SINE Alu -25 285 1 244 61 0 61 chr5 38461080 38461129 -161169021 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 * 246 62 0 0 chr5 38461125 38461157 -161168993 + (TCCCG)n Simple_repeat Simple_repeat 4 35 0 * 498 17 0 0 chr5 38461155 38461214 -161168936 + (TCTCC)n Simple_repeat Simple_repeat 2 60 0 2249 111 7 0 chr5 38461214 38461511 -161168639 - AluSx SINE Alu -13 299 1 40878 73 7 3 chr5 38462927 38468968 -161161182 + L1PA5 LINE L1 11 6073 -81 616 141 8 55 chr5 38469121 38469408 -161160742 + (TCCA)n Simple_repeat Simple_repeat 1 273 0 537 218 257 15 chr5 38469731 38469937 -161160213 + MLT1L LTR MaLR 3 258 -357 779 251 35 15 chr5 38470870 38471069 -161159081 + MER3 DNA MER1_type 7 209 0 280 269 21 43 chr5 38472743 38472836 -161157314 + MER20 DNA MER1_type 1 91 -128 * 659 245 73 10 chr5 38472828 38473020 -161157130 + MER20 DNA MER1_type 16 219 0 453 217 58 14 chr5 38473555 38473693 -161156457 - L1ME4a LINE L1 0 6121 5978 1325 216 15 29 chr5 38474126 38474468 -161155682 - L1MC4 LINE L1 -2 8040 7704 1662 166 10 33 chr5 38474644 38474945 -161155205 - AluJb SINE Alu -18 294 1 261 0 0 0 chr5 38475237 38475266 -161154884 + (CA)n Simple_repeat Simple_repeat 1 29 0 366 333 19 31 chr5 38476476 38476638 -161153512 + L3 LINE CR1 949 1108 -469 874 244 72 0 chr5 38476673 38476882 -161153268 - MER58A DNA MER1_type 0 224 1 355 326 95 21 chr5 38476883 38477125 -161153025 + L3 LINE CR1 1276 1535 -42 184 321 0 73 chr5 38477204 38477313 -161152837 + L2 LINE L2 3161 3261 -11 682 274 87 4 chr5 38477450 38477691 -161152459 - MIR SINE MIR 0 262 2 457 242 0 90 chr5 38477717 38477895 -161152255 - L2 LINE L2 0 3313 3152 1895 74 53 39 chr5 38478086 38478370 -161151780 - L1PA11 LINE L1 0 6174 5887 261 275 11 11 chr5 38479115 38479206 -161150944 - MIR SINE MIR -9 253 163 186 327 0 0 chr5 38479336 38479391 -161150759 - L2 LINE L2 -4 3309 3255 274 341 80 14 chr5 38479426 38479564 -161150586 + MIR3 SINE MIR 2 148 -60 201 254 100 77 chr5 38480088 38480218 -161149932 + L3 LINE CR1 1313 1445 -132 22 0 0 0 chr5 38480455 38480477 -161149673 + AT_rich Low_complexity Low_complexity 1 22 0 327 297 146 38 chr5 38482430 38482642 -161147508 + MIR SINE MIR 28 262 0 325 284 92 14 chr5 38482689 38482830 -161147320 - MIR SINE MIR -77 185 34 1831 153 40 23 chr5 38483454 38483801 -161146349 + L1MB7 LINE L1 5746 6098 -86 375 208 56 0 chr5 38483801 38483873 -161146277 + Tigger5 DNA MER2_type 1 76 -2247 258 173 77 0 chr5 38483884 38483936 -161146214 - Tigger5 DNA MER2_type -19 2304 2249 400 145 0 108 chr5 38483941 38484024 -161146126 + Tigger5 DNA MER2_type 2250 2323 0 278 111 0 0 chr5 38484050 38484086 -161146064 + MER2 DNA MER2_type 1 36 -309 348 179 0 0 chr5 38484096 38484152 -161145998 - MER2 DNA MER2_type -234 111 56 1045 199 107 46 chr5 38484163 38484444 -161145706 + MER2 DNA MER2_type 48 345 0 239 203 68 0 chr5 38484445 38484504 -161145646 + L1MB7 LINE L1 6122 6184 0 2047 191 66 7 chr5 38486525 38486966 -161143184 + MLT1C LTR MaLR 1 467 0 2735 133 4 84 chr5 38487137 38487634 -161142516 - LTR32 LTR ERVL 0 471 15 267 279 41 20 chr5 38488252 38488399 -161141751 - L1MC5 LINE L1 -182 7779 7630 291 284 99 57 chr5 38488597 38488657 -161141493 - MIR3 SINE MIR -32 176 120 2646 183 26 51 chr5 38488657 38489225 -161140925 + MLT2B3 LTR ERVL 1 554 0 291 284 99 57 chr5 38489225 38489305 -161140845 - MIR3 SINE MIR -88 120 30 239 371 125 11 chr5 38489315 38489587 -161140563 - L3b LINE CR1 -128 1455 1153 1927 70 19 0 chr5 38489782 38490038 -161140112 + L1PB1 LINE L1 5891 6151 0 585 178 171 0 chr5 38490615 38490767 -161139383 - MER5B DNA MER1_type 0 178 1 1162 172 43 0 chr5 38492185 38492394 -161137756 - MER20 DNA MER1_type -1 218 1 901 176 74 0 chr5 38492606 38492782 -161137368 - MER5A DNA MER1_type 0 189 1 304 326 21 33 chr5 38492985 38493160 -161136990 - MIR SINE MIR -62 146 16 252 91 0 0 chr5 38493649 38493682 -161136468 + AluSg/x SINE Alu 171 203 -99 727 122 70 0 chr5 38493682 38493797 -161136353 + AluSg/x SINE Alu 170 292 -17 21 71 0 0 chr5 38493800 38493842 -161136308 + AT_rich Low_complexity Low_complexity 1 42 0 915 92 14 7 chr5 38494088 38494229 -161135921 + L1MB2 LINE L1 6030 6171 0 521 211 21 21 chr5 38494637 38494779 -161135371 - MER104 DNA Tc2 -3 177 36 302 167 19 0 chr5 38494792 38494846 -161135304 + L1MA9 LINE L1 5976 6030 -282 2135 91 63 3 chr5 38494980 38495267 -161134883 - AluSx SINE Alu -8 304 1 451 139 0 14 chr5 38696218 38696290 -160933860 + AluJo/FRAM SINE Alu 194 264 -48 2227 111 0 0 chr5 38696380 38696678 -160933472 - AluSx SINE Alu -14 298 1 910 147 17 34 chr5 38696888 38697065 -160933085 + FRAM SINE Alu 1 173 -3 365 247 22 22 chr5 38697136 38697225 -160932925 + L2 LINE L2 3184 3272 0 1488 192 59 21 chr5 38697325 38697612 -160932538 - AluJb SINE Alu -14 298 1 1986 130 10 0 chr5 38697752 38698044 -160932106 - AluSx SINE Alu -17 295 1 1869 158 0 7 chr5 38698049 38698367 -160931783 - AluJo SINE Alu 0 316 1 318 309 151 13 chr5 38698742 38698894 -160931256 - MIR SINE MIR -70 192 20 228 254 18 0 chr5 38699828 38699883 -160930267 - MIR SINE MIR -120 142 87 420 109 0 0 chr5 38699969 38700024 -160930126 - Alu SINE Alu -20 292 238 1752 96 0 4 chr5 38700025 38700255 -160929895 + AluSg/x SINE Alu 82 310 0 1718 117 6 102 chr5 38700284 38700617 -160929533 + AluSg1 SINE Alu 3 303 -6 2633 44 0 0 chr5 38700780 38701078 -160929072 - AluY SINE Alu -11 300 3 204 40 0 0 chr5 38702514 38702539 -160927611 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1828 155 0 14 chr5 38702539 38702686 -160927464 - AluJb SINE Alu -32 280 137 2290 108 0 0 chr5 38702686 38702983 -160927167 - AluSg SINE Alu -13 297 1 1828 155 0 14 chr5 38702983 38703119 -160927031 - AluJb SINE Alu -175 137 1 29 0 0 0 chr5 38703254 38703283 -160926867 + AT_rich Low_complexity Low_complexity 1 29 0 2488 66 0 7 chr5 38703283 38703588 -160926562 - AluY SINE Alu -8 303 1 232 369 38 13 chr5 38703940 38704097 -160926053 + MER5A DNA MER1_type 28 188 -1 223 310 35 35 chr5 38705553 38705640 -160924510 + MIR SINE MIR 60 146 -116 2354 95 3 0 chr5 38705791 38706096 -160924054 - AluSx SINE Alu -1 311 6 1077 98 0 0 chr5 38706620 38706753 -160923397 - FLAM_C SINE Alu 0 133 1 2357 97 0 3 chr5 38708263 38708571 -160921579 + AluSx SINE Alu 1 307 -5 2099 109 3 3 chr5 38708889 38709216 -160920934 + AluSq SINE Alu 1 327 0 28 29 0 0 chr5 38709397 38709432 -160920718 + AT_rich Low_complexity Low_complexity 1 35 0 847 156 0 52 chr5 38709938 38710092 -160920058 + FRAM SINE Alu 1 40 0 505 213 182 106 chr5 38710132 38710489 -160919661 + L2 LINE L2 2927 3310 -3 185 346 74 0 chr5 38710843 38710924 -160919226 + L2 LINE L2 3150 3236 -36 2382 70 3 3 chr5 38711735 38712033 -160918117 + AluY SINE Alu 1 298 -13 594 264 116 5 chr5 38712626 38712842 -160917308 + MIR SINE MIR 20 259 -3 245 155 69 0 chr5 38713302 38713360 -160916790 + L1M4 LINE L1 5221 5282 -864 977 178 38 38 chr5 38715575 38715788 -160914362 - MER20 DNA MER1_type -6 213 1 726 205 0 0 chr5 38716460 38716577 -160913573 + FLAM_C SINE Alu 2 118 -15 1190 217 21 36 chr5 38716608 38716731 -160913419 + AluJo SINE Alu 18 141 -171 1930 126 10 23 chr5 38716731 38717032 -160913118 + AluSq SINE Alu 1 297 -16 1190 217 21 36 chr5 38717032 38717189 -160912961 + AluJo SINE Alu 141 294 -18 1173 239 134 19 chr5 38717192 38717934 -160912216 - L1MDa LINE L1 -2158 4382 3468 1973 228 45 63 chr5 38717995 38718027 -160912123 - L1MDa LINE L1 -3621 2919 2888 1881 138 19 22 chr5 38718027 38718338 -160911812 - AluSx SINE Alu -2 310 1 1973 228 45 63 chr5 38718338 38718645 -160911505 - L1MDa LINE L1 -3652 2888 2577 2257 104 3 7 chr5 38718645 38718952 -160911198 - AluSq SINE Alu -7 306 1 1666 89 181 4 chr5 38718957 38719216 -160910934 - AluSg1 SINE Alu -4 305 1 1973 228 45 63 chr5 38719216 38719437 -160910713 - L1MDa LINE L1 -3967 2573 2350 1688 144 6 73 chr5 38719437 38719764 -160910386 - AluJb SINE Alu -7 305 1 1973 228 45 63 chr5 38719764 38720219 -160909931 - L1MDa LINE L1 -4190 2350 1917 180 111 0 0 chr5 38720456 38720483 -160909667 + (CA)n Simple_repeat Simple_repeat 2 28 0 425 228 12 94 chr5 38720778 38720865 -160909285 + L2 LINE L2 1709 1777 -1537 2337 97 0 13 chr5 38720865 38721175 -160908975 - AluSx SINE Alu -6 306 1 425 228 12 94 chr5 38721175 38721258 -160908892 + L2 LINE L2 1777 1865 -1449 776 215 70 107 chr5 38721387 38721553 -160908597 + L1ME3A LINE L1 3117 3288 -2858 1411 208 24 10 chr5 38721553 38721841 -160908309 + AluJo SINE Alu 1 292 -20 776 215 70 107 chr5 38721841 38721931 -160908219 + L1ME3A LINE L1 3288 3380 -2766 2126 130 0 0 chr5 38721931 38722230 -160907920 + AluSx SINE Alu 1 299 -13 776 215 70 107 chr5 38722230 38722437 -160907713 + L1ME3A LINE L1 3380 3593 -2553 2141 111 7 0 chr5 38722437 38722717 -160907433 + AluSx SINE Alu 1 282 -30 216 0 0 0 chr5 38722722 38722746 -160907404 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 776 215 70 107 chr5 38722746 38722986 -160907164 + L1ME3A LINE L1 3597 3802 -2344 1082 294 89 45 chr5 38723032 38723526 -160906624 + REP3 LTR ERV 3 518 -44 1970 156 0 0 chr5 38723611 38723913 -160906237 + AluJo SINE Alu 3 304 -8 2564 71 0 0 chr5 38723913 38724221 -160905929 + AluSg SINE Alu 1 308 -2 379 246 42 67 chr5 38725208 38725337 -160904813 + L1ME3A LINE L1 5040 5162 -984 2441 61 0 3 chr5 38725337 38725634 -160904516 - AluY SINE Alu -15 296 1 379 246 42 67 chr5 38725634 38725744 -160904406 + L1ME3A LINE L1 5162 5273 -873 2115 102 14 17 chr5 38725746 38726040 -160904110 + AluSx SINE Alu 1 293 -19 1089 203 46 0 chr5 38726069 38726108 -160904042 + AluJb SINE Alu 85 121 -191 189 0 0 0 chr5 38726108 38726129 -160904021 + (TA)n Simple_repeat Simple_repeat 1 21 0 1089 203 46 0 chr5 38726129 38726306 -160903844 + AluJb SINE Alu 121 311 -1 2363 102 0 9 chr5 38726348 38726663 -160903487 + AluSx SINE Alu 1 312 0 1334 231 60 74 chr5 38726698 38726782 -160903368 + L1ME3A LINE L1 5379 5463 -707 2570 66 3 0 chr5 38726782 38727087 -160903063 + AluSp SINE Alu 1 306 -7 1334 231 60 74 chr5 38727087 38727246 -160902904 + L1ME3A LINE L1 5463 5623 -547 2199 117 0 22 chr5 38727246 38727563 -160902587 + AluSg SINE Alu 1 310 0 1334 231 60 74 chr5 38727563 38727833 -160902317 + L1ME3A LINE L1 5623 5887 -283 2204 114 0 7 chr5 38727833 38728132 -160902018 + AluSx SINE Alu 1 297 -15 1334 231 60 74 chr5 38728132 38728197 -160901953 + L1ME3A LINE L1 5887 5951 -219 695 210 0 51 chr5 38728364 38728502 -160901648 - FLAM_A SINE Alu -1 132 2 277 135 0 6 chr5 38728528 38728580 -160901570 + AluJb SINE Alu 1 37 -265 2012 128 3 24 chr5 38728580 38728878 -160901272 - AluSx SINE Alu -14 298 7 1834 132 0 4 chr5 38728886 38729188 -160900962 + AluJb SINE Alu 27 327 0 27 0 0 0 chr5 38729224 38729251 -160900899 + AT_rich Low_complexity Low_complexity 1 27 0 1552 189 40 7 chr5 38730946 38731247 -160898903 + AluJo SINE Alu 1 311 -1 2469 67 3 0 chr5 38731449 38731748 -160898402 - AluY SINE Alu -10 301 2 2139 112 0 10 chr5 38732019 38732313 -160897837 - AluSg SINE Alu -18 292 2 21 57 0 0 chr5 38732313 38732348 -160897802 + AT_rich Low_complexity Low_complexity 1 35 0 1992 112 6 86 chr5 38732507 38732846 -160897304 - AluSx SINE Alu 0 312 1 1496 184 122 0 chr5 38732946 38733250 -160896900 - MSTD LTR MaLR -55 341 1 221 56 0 28 chr5 38733277 38733313 -160896837 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 14740 22 3 0 chr5 38733313 38735755 -160894395 - L1PA3 LINE L1 -24 6131 3682 1785 123 0 0 chr5 38735793 38736036 -160894114 + AluSc SINE Alu 1 243 -66 2397 74 13 0 chr5 38736037 38736336 -160893814 + AluSp SINE Alu 1 303 -10 559 78 0 0 chr5 38736336 38736440 -160893710 + AluSc SINE Alu 236 339 0 12183 127 4 34 chr5 38736764 38738020 -160892130 + L1P LINE L1 630 1806 -4340 2165 120 3 0 chr5 38738020 38738321 -160891829 - AluSp SINE Alu -11 302 1 12183 127 4 34 chr5 38738321 38739087 -160891063 + L1P LINE L1 1806 2593 -3553 2026 106 0 43 chr5 38739666 38739969 -160890181 - AluSc SINE Alu -19 290 1 820 215 54 56 chr5 38740008 38740263 -160889887 + MLT1A2 LTR MaLR 1 263 -133 776 176 30 0 chr5 38740315 38740446 -160889704 - AluJo SINE Alu -176 136 2 689 152 36 9 chr5 38740449 38740561 -160889589 + MLT1A2 LTR MaLR 260 374 0 2171 112 6 13 chr5 38740588 38740901 -160889249 + AluSx SINE Alu 1 311 -1 2125 132 3 0 chr5 38741283 38741586 -160888564 + AluSx SINE Alu 5 308 -4 294 262 0 36 chr5 38741989 38742073 -160888077 + L1ME4a LINE L1 5960 6040 -81 30 0 0 0 chr5 38742074 38742104 -160888046 + AT_rich Low_complexity Low_complexity 1 30 0 1900 178 0 0 chr5 38742105 38742398 -160887752 + AluJo SINE Alu 1 293 -19 2522 65 0 3 chr5 38742400 38742710 -160887440 + AluY SINE Alu 1 309 -2 1684 177 17 23 chr5 38743070 38743370 -160886780 + AluJo SINE Alu 1 298 -14 1416 176 39 4 chr5 38744036 38744292 -160885858 + MER90 LTR ERV1 1 265 -310 2471 20 40 20 chr5 38744491 38744792 -160885358 - AluY SINE Alu -4 307 1 1349 180 34 102 chr5 38744852 38745064 -160885086 + MLT1A2 LTR MaLR 5 230 -144 2299 53 42 3 chr5 38745064 38745349 -160884801 + AluY SINE Alu 1 296 -15 1349 180 34 102 chr5 38745349 38745407 -160884743 + MLT1A2 LTR MaLR 230 290 -84 1649 161 0 25 chr5 38745407 38745687 -160884463 + AluJb SINE Alu 9 281 -31 1349 180 34 102 chr5 38745687 38745799 -160884351 + MLT1A2 LTR MaLR 290 362 -12 2132 125 3 6 chr5 38745989 38746300 -160883850 + AluSx SINE Alu 1 310 -2 1724 79 22 13 chr5 38746414 38746642 -160883508 + MER30 DNA MER1_type 1 230 0 667 245 75 33 chr5 38746800 38747012 -160883138 + MER74B LTR ERVL 55 275 -347 2483 69 3 3 chr5 38747012 38747317 -160882833 - AluSp SINE Alu -8 305 1 818 199 65 96 chr5 38747342 38747698 -160882452 - MER41C LTR ERV1 0 554 210 1960 140 7 0 chr5 38747698 38747983 -160882167 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr5 38747991 38748013 -160882137 + AT_rich Low_complexity Low_complexity 1 22 0 736 243 43 48 chr5 38748028 38748234 -160881916 - MER41C LTR ERV1 -340 214 15 2770 9 0 19 chr5 38748234 38748558 -160881592 - AluYb8 SINE Alu 0 318 1 736 243 43 48 chr5 38748558 38748573 -160881577 - MER41C LTR ERV1 -539 15 1 * 902 221 30 46 chr5 38748573 38748832 -160881318 + MER74B LTR ERVL 291 545 -77 349 269 103 19 chr5 38748694 38748850 -160881300 - MER88 LTR ERVL -219 245 77 * 927 184 0 17 chr5 38748886 38749060 -160881090 + AluJo SINE Alu 125 295 -17 282 303 112 44 chr5 38749293 38749587 -160880563 + MER110-int LTR ERV1 1893 2206 -2441 1029 305 22 63 chr5 38749739 38750185 -160879965 + MER110-int LTR ERV1 2342 2766 -1881 2022 101 42 0 chr5 38750185 38750472 -160879678 + AluSx SINE Alu 2 300 -12 1029 305 22 63 chr5 38750472 38750533 -160879617 + MER110-int LTR ERV1 2766 2828 -1819 189 0 0 0 chr5 38750538 38750559 -160879591 + (TG)n Simple_repeat Simple_repeat 2 22 0 1152 87 12 0 chr5 38750559 38750720 -160879430 - AluSp SINE Alu -14 299 137 307 230 62 71 chr5 38750763 38750876 -160879274 + MER110-int LTR ERV1 2847 2958 -1689 2122 111 7 3 chr5 38751207 38751513 -160878637 + AluSq SINE Alu 2 308 -5 1059 121 39 208 chr5 38752351 38752707 -160877443 - MER34C LTR ERV1 -289 296 1 2194 99 3 10 chr5 38752708 38753020 -160877130 - AluSx SINE Alu -2 310 1 1521 174 7 18 chr5 38753023 38753305 -160876845 - AluJo SINE Alu -19 293 15 2234 193 73 34 chr5 38753555 38753790 -160876360 + MER90 LTR ERV1 58 283 -331 1664 152 7 42 chr5 38753790 38753964 -160876186 - AluJo SINE Alu -14 298 138 2292 97 0 0 chr5 38753964 38754273 -160875877 - AluSx SINE Alu -3 309 1 1664 152 7 42 chr5 38754273 38754407 -160875743 - AluJo SINE Alu -174 138 1 2234 193 73 34 chr5 38754407 38754694 -160875456 + MER90 LTR ERV1 283 600 -14 2363 88 3 0 chr5 38756074 38756382 -160873768 + AluSx SINE Alu 1 309 -3 388 145 94 188 chr5 38756507 38756544 -160873606 + MSTC LTR MaLR 3 42 -386 2094 111 0 7 chr5 38756544 38756842 -160873308 - AluSq SINE Alu -17 296 1 2013 139 3 0 chr5 38756844 38757154 -160872996 - AluSx SINE Alu -1 311 1 388 145 94 188 chr5 38757154 38757202 -160872948 + MSTC LTR MaLR 43 76 -352 2162 109 7 0 chr5 38757202 38757495 -160872655 + AluSx SINE Alu 2 296 -16 388 145 94 188 chr5 38757495 38757543 -160872607 + MSTC LTR MaLR 76 127 -301 1096 166 0 6 chr5 38757546 38757723 -160872427 - LTR32 LTR ERVL -4 467 292 1061 95 12 24 chr5 38757723 38757892 -160872258 - MER4C LTR ERV1 0 465 299 1550 105 5 0 chr5 38757893 38758103 -160872047 + AluSx SINE Alu 1 211 -101 336 130 0 0 chr5 38758103 38758149 -160872001 + AluSx SINE Alu 243 288 -13 2169 108 0 0 chr5 38758165 38758470 -160871680 - MER4C LTR ERV1 -158 307 3 1096 176 0 0 chr5 38758472 38758648 -160871502 - LTR32 LTR ERVL -176 295 120 2678 157 0 58 chr5 38759003 38759198 -160870952 - LTR32 LTR ERVL 0 471 266 2279 62 0 7 chr5 38759198 38759488 -160870662 - AluSc SINE Alu -21 288 1 2678 157 0 58 chr5 38759488 38759777 -160870373 - LTR32 LTR ERVL -205 266 15 2129 108 6 10 chr5 38761025 38761339 -160868811 - AluSq SINE Alu 0 313 1 321 348 55 30 chr5 38761654 38761855 -160868295 + L1M4b LINE L1 544 749 -6110 679 148 98 0 chr5 38761855 38762013 -160868137 - AluJb SINE Alu 0 318 149 2279 79 7 20 chr5 38762199 38762504 -160867646 + AluSq SINE Alu 1 301 -12 239 259 17 0 chr5 38762748 38762806 -160867344 + L1ME LINE L1 5753 5811 -353 318 300 0 60 chr5 38763029 38763129 -160867021 - L1MC4 LINE L1 -1337 6705 6612 305 225 14 106 chr5 38763133 38763275 -160866875 + L1MC4 LINE L1 6595 6723 -1319 302 76 0 76 chr5 38763275 38763367 -160866783 + (TA)n Simple_repeat Simple_repeat 2 86 0 319 204 10 82 chr5 38763370 38763468 -160866682 + L1MC4 LINE L1 6613 6703 -1339 308 182 20 111 chr5 38763408 38763507 -160866643 - L1MC4 LINE L1 -1339 6703 6614 * 454 104 0 77 chr5 38763525 38763708 -160866442 + (TA)n Simple_repeat Simple_repeat 1 169 0 315 226 26 70 chr5 38763712 38763827 -160866323 + L1MC4 LINE L1 6614 6723 -1319 308 189 56 56 chr5 38763760 38763850 -160866300 - L1MC4 LINE L1 -1339 6703 6614 * 315 222 17 77 chr5 38763844 38763961 -160866189 + L1MC4 LINE L1 6614 6723 -1319 306 196 21 93 chr5 38763948 38764045 -160866105 - L1MC4 LINE L1 -1339 6703 6614 * 307 221 11 63 chr5 38763989 38764084 -160866066 + L1MC4 LINE L1 6614 6703 -1339 309 71 0 71 chr5 38764089 38764174 -160865976 + (TA)n Simple_repeat Simple_repeat 2 80 0 329 200 29 73 chr5 38764178 38764317 -160865833 + L1MC4 LINE L1 6614 6723 -1319 635 65 0 65 chr5 38764317 38764472 -160865678 + (TA)n Simple_repeat Simple_repeat 2 146 0 383 184 64 68 chr5 38764480 38764803 -160865347 + L1MB8 LINE L1 5148 5471 -707 2286 103 0 0 chr5 38764803 38765114 -160865036 + AluSq SINE Alu 1 311 -2 383 184 64 68 chr5 38765114 38765463 -160864687 + L1MB8 LINE L1 5471 5820 -358 1421 172 31 14 chr5 38765463 38765754 -160864396 + AluJb SINE Alu 1 296 -16 1864 115 52 3 chr5 38765758 38766045 -160864105 + AluSx SINE Alu 1 301 -11 383 184 64 68 chr5 38766045 38766136 -160864014 + L1MB8 LINE L1 5823 6025 -153 2141 103 0 6 chr5 38766167 38766479 -160863671 + AluY SINE Alu 2 311 0 2893 178 26 12 chr5 38766491 38766996 -160863154 + MER21B LTR ERV1 21 532 -331 242 175 35 0 chr5 38766996 38767053 -160863097 + L1M4 LINE L1 3642 3700 -2446 1816 147 0 50 chr5 38767053 38767372 -160862778 + AluSx SINE Alu 1 303 -9 2151 112 0 0 chr5 38768805 38769159 -160860991 - AluSq SINE Alu 0 313 1 1377 137 9 9 chr5 38769233 38769460 -160860690 + AluJo SINE Alu 85 311 -1 1222 229 18 0 chr5 38769469 38769805 -160860345 + L1M4 LINE L1 3687 4028 -2118 2118 98 0 3 chr5 38769805 38770110 -160860040 + AluSx SINE Alu 1 304 -8 1014 112 11 17 chr5 38770212 38770391 -160859759 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2041 114 3 19 chr5 38770393 38770518 -160859632 - AluSx SINE Alu 0 425 300 1620 0 0 0 chr5 38770518 38770698 -160859452 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2041 114 3 19 chr5 38770698 38771002 -160859148 - AluSx SINE Alu -125 300 1 2444 73 0 3 chr5 38771019 38771333 -160858817 - AluSp SINE Alu 0 313 1 1342 201 22 11 chr5 38771412 38771690 -160858460 + AluJb SINE Alu 1 281 -31 297 0 0 0 chr5 38771693 38771726 -160858424 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 980 163 0 123 chr5 38772341 38772593 -160857557 + AluJb SINE Alu 82 302 -10 667 301 49 12 chr5 38772650 38772975 -160857175 + L1MA10 LINE L1 5660 5996 -172 * 1368 222 18 15 chr5 38772688 38773026 -160857124 + L1ME1 LINE L1 5704 6042 -124 1703 214 41 48 chr5 38773115 38773527 -160856623 + LTR2 LTR ERV1 41 449 0 553 203 16 16 chr5 38773527 38773655 -160856495 + L1ME1 LINE L1 6039 6166 0 * 1451 227 35 54 chr5 38773627 38774111 -160856039 + L1ME1 LINE L1 5636 6110 -56 2232 87 0 3 chr5 38774113 38774411 -160855739 + AluSp SINE Alu 1 297 -16 25 0 0 0 chr5 38774434 38774459 -160855691 + AT_rich Low_complexity Low_complexity 1 25 0 852 136 0 0 chr5 38774548 38774673 -160855477 - FLAM_C SINE Alu -8 125 1 463 265 7 7 chr5 38775634 38775785 -160854365 + L1MA10 LINE L1 6184 6334 0 333 296 127 48 chr5 38775787 38775976 -160854174 - L2 LINE L2 -420 2894 2691 2184 116 3 0 chr5 38776131 38776442 -160853708 + AluSx SINE Alu 1 312 0 260 274 33 4 chr5 38776459 38776526 -160853624 - MIR SINE MIR -61 147 86 762 179 0 0 chr5 38777910 38778027 -160852123 + FLAM_C SINE Alu 2 118 -25 195 42 0 0 chr5 38778031 38778055 -160852095 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 734 334 36 22 chr5 38778751 38779113 -160851037 + L2 LINE L2 2947 3313 0 2039 106 21 0 chr5 38779388 38779670 -160850480 - AluSg SINE Alu -20 290 3 1666 148 46 7 chr5 38779675 38779959 -160850191 - AluJb SINE Alu -17 295 1 2319 97 0 0 chr5 38780123 38780433 -160849717 - AluSx SINE Alu -2 310 1 424 181 0 0 chr5 38780451 38780534 -160849616 + AluJ/FRAM SINE Alu 226 308 -4 318 262 86 61 chr5 38780690 38780851 -160849299 - L1MC5 LINE L1 -246 7715 7559 1058 103 0 0 chr5 38780851 38780997 -160849153 + L1PA10 LINE L1 6016 6161 -7 2123 113 3 7 chr5 38781000 38781310 -160848840 + AluSx SINE Alu 1 309 -3 318 262 86 61 chr5 38781310 38781587 -160848563 - L1MC5 LINE L1 -403 7558 7262 1913 127 10 21 chr5 38781623 38781914 -160848236 - AluSx SINE Alu -24 288 1 2409 177 32 54 chr5 38782051 38782210 -160847940 - L1MB7 LINE L1 -16 6168 6007 1934 126 4 0 chr5 38782210 38782488 -160847662 - AluSp SINE Alu -34 279 1 2409 177 32 54 chr5 38782488 38782917 -160847233 - L1MB7 LINE L1 -177 6007 5593 192 40 0 0 chr5 38783142 38783167 -160846983 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2573 163 23 91 chr5 38784017 38784214 -160845936 - L1PB1 LINE L1 0 6151 5942 1835 124 0 40 chr5 38784214 38784513 -160845637 - AluSx SINE Alu -25 287 1 2573 163 23 91 chr5 38784513 38784698 -160845452 - L1PB1 LINE L1 -209 5942 5746 239 133 0 0 chr5 38784698 38784743 -160845407 - LTR66 LTR ERVL -172 438 394 2573 163 23 91 chr5 38784743 38785038 -160845112 - L1PB1 LINE L1 -405 5746 5518 2482 51 0 6 chr5 38785038 38785351 -160844799 - AluY SINE Alu 0 311 1 2573 163 23 91 chr5 38785351 38785470 -160844680 - L1PB1 LINE L1 -633 5518 5392 337 57 0 0 chr5 38785483 38785536 -160844614 - AluSp/q SINE Alu 0 303 251 261 215 103 65 chr5 38785569 38785676 -160844474 + MIR SINE MIR 20 130 -78 2393 63 7 0 chr5 38786633 38786935 -160843215 - AluSp SINE Alu -9 304 1 198 118 0 0 chr5 38787686 38787720 -160842430 + (TTTCC)n Simple_repeat Simple_repeat 4 37 0 1612 163 24 7 chr5 38788231 38788525 -160841625 + AluJb SINE Alu 1 299 -13 1836 134 0 3 chr5 38788600 38788891 -160841259 + AluSg SINE Alu 3 292 -18 990 236 9 103 chr5 38789215 38789545 -160840605 - AluJb SINE Alu -3 299 1 363 113 0 0 chr5 38789801 38789863 -160840287 + (GA)n Simple_repeat Simple_repeat 1 62 0 513 71 0 0 chr5 38791186 38791256 -160838894 + (TC)n Simple_repeat Simple_repeat 1 70 0 387 0 0 0 chr5 38791856 38791899 -160838251 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 183 42 0 0 chr5 38792556 38792580 -160837570 + (CCGGG)n Simple_repeat Simple_repeat 4 27 0 414 85 0 0 chr5 38794156 38794215 -160835935 + (TC)n Simple_repeat Simple_repeat 2 60 0 315 0 0 0 chr5 38794818 38794853 -160835297 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr5 38795510 38795535 -160834615 + GC_rich Low_complexity Low_complexity 1 25 0 414 85 0 0 chr5 38795877 38795936 -160834214 + (GA)n Simple_repeat Simple_repeat 2 60 0 273 29 0 0 chr5 38797511 38797545 -160832605 + (CCCGG)n Simple_repeat Simple_repeat 4 37 0 351 0 0 0 chr5 38798202 38798241 -160831909 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 414 85 0 0 chr5 38798845 38798904 -160831246 + (GA)n Simple_repeat Simple_repeat 2 60 0 25 0 0 0 chr5 38800503 38800528 -160829622 + GC_rich Low_complexity Low_complexity 1 25 0 605 234 18 24 chr5 38801021 38801188 -160828962 + AluSg SINE Alu 22 187 -123 273 29 0 0 chr5 38801579 38801613 -160828537 + (CCGGG)n Simple_repeat Simple_repeat 4 37 0 504 72 0 0 chr5 38802386 38802455 -160827695 + (GA)n Simple_repeat Simple_repeat 2 70 0 212 0 36 0 chr5 38803331 38803359 -160826791 + (CCCGG)n Simple_repeat Simple_repeat 4 32 0 477 0 0 0 chr5 38905000 38905053 -160725097 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 242 276 0 53 chr5 38907430 38907506 -160722644 - MIR SINE MIR -109 153 82 30 0 0 0 chr5 38908377 38908407 -160721743 + AT_rich Low_complexity Low_complexity 1 30 0 215 184 41 20 chr5 38908505 38908554 -160721596 + GA-rich Low_complexity Low_complexity 4 53 0 29 0 0 0 chr5 38908557 38908586 -160721564 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr5 38910299 38910328 -160719822 + AT_rich Low_complexity Low_complexity 1 29 0 197 304 76 0 chr5 38910571 38910663 -160719487 - MIR SINE MIR 0 262 164 731 199 6 60 chr5 38910722 38910888 -160719262 + MIR SINE MIR 84 240 -22 2365 74 0 3 chr5 38911542 38911838 -160718312 - AluY SINE Alu -14 297 3 209 175 0 35 chr5 38912909 38912966 -160717184 + T-rich Low_complexity Low_complexity 6 60 0 1314 165 47 88 chr5 38912968 38913265 -160716885 - AluJb SINE Alu -23 289 5 2234 107 0 3 chr5 38913790 38914090 -160716060 + AluSx SINE Alu 1 299 -13 582 258 17 88 chr5 38914936 38915176 -160714974 + MIR SINE MIR 26 248 -14 22 0 0 0 chr5 38917869 38917891 -160712259 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 38919473 38919503 -160710647 + AT_rich Low_complexity Low_complexity 1 30 0 212 228 105 18 chr5 38919999 38920056 -160710094 + L2 LINE L2 3210 3271 -1 377 212 0 0 chr5 38921097 38921163 -160708987 + MER5B DNA MER1_type 1 66 -112 456 19 0 0 chr5 38921202 38921255 -160708895 + (CA)n Simple_repeat Simple_repeat 2 54 0 269 346 29 29 chr5 38921479 38921687 -160708463 - L2 LINE L2 -1377 1937 1730 454 220 77 6 chr5 38922857 38923025 -160707125 - Charlie7 DNA MER1_type -1 2611 2432 288 151 55 14 chr5 38923011 38923084 -160707066 - Charlie7 DNA MER1_type -2507 105 30 * 367 363 44 11 chr5 38923439 38923621 -160706529 + MIR3 SINE MIR 11 198 -10 2365 43 7 20 chr5 38923812 38924112 -160706038 + AluY SINE Alu 1 296 -15 318 26 0 0 chr5 38924806 38924845 -160705305 + (TG)n Simple_repeat Simple_repeat 1 39 0 272 319 187 18 chr5 38924951 38925117 -160705033 + MIR SINE MIR 48 241 -21 210 277 53 0 chr5 38925299 38925393 -160704757 + MIR SINE MIR 33 131 -77 * 1682 280 108 11 chr5 38925363 38926108 -160704042 + L2 LINE L2 2363 3187 -126 1852 133 0 11 chr5 38926108 38926379 -160703771 - AluSq SINE Alu -45 268 1 359 252 29 29 chr5 38926546 38926649 -160703501 + MER5A DNA MER1_type 4 106 -83 2106 137 10 0 chr5 38928716 38929009 -160701141 + AluSx SINE Alu 1 296 -16 211 224 112 121 chr5 38929286 38929402 -160700748 + L2 LINE L2 3183 3297 -16 253 346 29 15 chr5 38929629 38929765 -160700385 + L2 LINE L2 2917 3054 -218 922 290 138 17 chr5 38929844 38930442 -160699708 - L2 LINE L2 0 3313 2634 186 209 0 0 chr5 38933097 38933140 -160697010 + (CATA)n Simple_repeat Simple_repeat 4 46 0 663 245 121 48 chr5 38933187 38933600 -160696550 - L1ME4a LINE L1 -95 6026 5584 44 0 0 0 chr5 38935661 38935705 -160694445 + AT_rich Low_complexity Low_complexity 1 44 0 302 278 83 9 chr5 38935715 38935732 -160694418 + L1MC4 LINE L1 6588 6602 -1440 3479 54 0 9 chr5 38935732 38936174 -160693976 - L1PA5 LINE L1 0 6154 5717 302 278 83 9 chr5 38936174 38936264 -160693886 + L1MC4 LINE L1 6602 6703 -1339 * 334 250 0 48 chr5 38936188 38936292 -160693858 - L1MC4 LINE L1 -1339 6703 6605 208 209 22 0 chr5 38936292 38936383 -160693767 + (TA)n Simple_repeat Simple_repeat 1 93 0 710 286 94 0 chr5 38936436 38936670 -160693480 + MIR SINE MIR 5 260 -2 2112 79 0 4 chr5 38937700 38937965 -160692185 - AluSq SINE Alu -19 294 31 193 267 105 57 chr5 38938208 38938313 -160691837 + L2 LINE L2 3145 3254 -18 232 266 0 0 chr5 38938573 38938637 -160691513 + A-rich Low_complexity Low_complexity 1 64 0 724 259 80 42 chr5 38938963 38939202 -160690948 + MIR SINE MIR 15 262 0 470 78 0 122 chr5 38939212 38939251 -160690899 + MADE1 DNA Mariner 1 25 -55 2138 81 3 62 chr5 38939251 38939571 -160690579 - AluY SINE Alu -10 301 1 470 78 0 122 chr5 38939571 38939621 -160690529 + MADE1 DNA Mariner 25 79 -1 1739 196 3 0 chr5 38940772 38941073 -160689077 + AluJo SINE Alu 1 302 -10 298 279 209 17 chr5 38941702 38941874 -160688276 - MIR SINE MIR -6 256 52 2423 266 86 14 chr5 38942753 38943861 -160686289 + L2 LINE L2 2076 3262 -51 607 293 35 34 chr5 38944793 38945040 -160685110 - MIR SINE MIR -10 252 3 1168 254 78 27 chr5 38945475 38945715 -160684435 - L1M4 LINE L1 -2174 3972 3746 529 31 0 0 chr5 38945715 38945780 -160684370 - L1PA5 LINE L1 -7 6147 6083 1168 254 78 27 chr5 38945780 38946168 -160683982 - L1M4 LINE L1 -2400 3746 3312 491 285 66 96 chr5 38946402 38946798 -160683352 + L3 LINE CR1 419 802 -775 799 266 66 20 chr5 38946824 38947068 -160683082 - MIR SINE MIR 0 262 8 483 302 90 62 chr5 38947061 38947658 -160682492 + L3 LINE CR1 828 1493 -84 * 254 254 28 14 chr5 38947971 38948042 -160682108 + L3 LINE CR1 1495 1566 -11 242 326 53 79 chr5 38948048 38948428 -160681722 + L2 LINE L2 2376 2745 -569 1778 193 0 0 chr5 38948434 38948724 -160681426 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr5 38948724 38948745 -160681405 + AT_rich Low_complexity Low_complexity 1 21 0 875 235 6 0 chr5 38948746 38948912 -160681238 + AluJb SINE Alu 134 300 -12 303 104 0 0 chr5 38949229 38949277 -160680873 + (TG)n Simple_repeat Simple_repeat 1 48 0 815 269 43 35 chr5 38950431 38950687 -160679463 - MIR SINE MIR -3 259 2 1982 142 3 3 chr5 38950831 38951120 -160679030 + AluSx SINE Alu 1 289 -23 235 282 105 8 chr5 38951613 38951737 -160678413 - Charlie8 DNA MER1_type -1987 430 295 1012 98 0 0 chr5 38951745 38952068 -160678082 + AluSp SINE Alu 1 323 0 404 231 22 0 chr5 38952170 38952261 -160677889 - Charlie8 DNA MER1_type -2278 139 47 271 309 67 138 chr5 38952421 38952631 -160677519 - MER91A DNA MER1_type 0 196 2 2362 95 0 0 chr5 38953030 38953334 -160676816 + AluSc SINE Alu 1 304 -5 187 278 93 0 chr5 38953957 38954011 -160676139 + L3b LINE CR1 1274 1332 -251 619 243 130 0 chr5 38955875 38956037 -160674113 - MER5A DNA MER1_type 0 189 4 232 287 37 37 chr5 38956058 38956194 -160673956 + L1M2 LINE L1 5524 5659 -641 218 159 45 0 chr5 38956197 38956241 -160673909 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1930 152 35 0 chr5 38956765 38957054 -160673096 + AluSx SINE Alu 1 299 -13 2259 120 0 0 chr5 38957088 38957397 -160672753 - AluSx SINE Alu -3 309 1 306 0 0 0 chr5 38957444 38957478 -160672672 + (TA)n Simple_repeat Simple_repeat 1 34 0 482 350 41 16 chr5 38961547 38961793 -160668357 + L3b LINE CR1 1112 1363 -220 2407 100 0 0 chr5 38961803 38962114 -160668036 - AluSx SINE Alu -1 311 1 206 326 10 77 chr5 38962533 38962661 -160667489 + MIR3 SINE MIR 46 162 -46 261 146 0 0 chr5 38962692 38962740 -160667410 + (ATG)n Simple_repeat Simple_repeat 1 48 0 349 264 200 0 chr5 38964017 38964157 -160665993 - MIR SINE MIR 0 262 95 315 328 50 0 chr5 38964461 38964580 -160665570 + MIR SINE MIR 77 201 -61 2227 119 0 0 chr5 38964958 38965261 -160664889 - AluSq SINE Alu -10 303 1 982 202 44 39 chr5 38966517 38966879 -160663271 + L1M4 LINE L1 3327 3690 -2456 4591 107 10 0 chr5 38966879 38967553 -160662597 - LOR1-int LTR ERV1 -3984 4136 3456 1497 141 11 38 chr5 38967553 38967908 -160662242 - MER4A LTR ERV1 0 664 261 669 91 0 10 chr5 38967908 38968007 -160662143 - MER4A LTR ERV1 -566 98 1 1488 113 17 0 chr5 38968007 38968237 -160661913 - LOR1-int LTR ERV1 -4661 3459 3226 710 100 0 0 chr5 38968237 38968337 -160661813 - AluSg/x SINE Alu -13 299 200 2930 94 16 0 chr5 38968343 38968788 -160661362 - LOR1-int LTR ERV1 -4925 3195 2744 286 170 40 10 chr5 38968993 38969093 -160661057 + (TA)n Simple_repeat Simple_repeat 1 103 0 375 123 0 15 chr5 38969183 38969248 -160660902 - MER4A LTR ERV1 -566 98 35 267 171 0 29 chr5 38969225 38969295 -160660855 + LTR66 LTR ERVL 376 443 -167 * 231 214 0 0 chr5 38969295 38969337 -160660813 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 337 189 44 56 chr5 38969343 38969433 -160660717 + L1MC4 LINE L1 6614 6702 -1340 13371 94 50 13 chr5 38969437 38971649 -160658501 - LOR1b-int LTR ERV1 -5477 2643 350 2522 113 25 0 chr5 38971651 38972015 -160658135 - THE1C LTR MaLR -2 373 1 9891 113 28 19 chr5 38972021 38973203 -160656947 - THE1C-int LTR MaLR -6 1574 372 2061 141 40 0 chr5 38973203 38973501 -160656649 + AluSx SINE Alu 1 310 -2 9891 113 28 19 chr5 38973501 38973877 -160656273 - THE1C-int LTR MaLR -1208 372 1 2464 115 19 0 chr5 38973877 38974241 -160655909 - THE1C LTR MaLR 0 375 5 1843 179 23 14 chr5 38974244 38974776 -160655374 - LOR1b-int LTR ERV1 -7704 416 1 1580 142 12 0 chr5 38974776 38975029 -160655121 - LOR1b LTR ERV1 0 461 206 2015 154 6 12 chr5 38975158 38975488 -160654662 - MER1B DNA MER1_type -8 331 4 286 253 0 0 chr5 38975534 38975609 -160654541 + L1M4 LINE L1 3969 4043 -2103 1797 269 40 10 chr5 38975710 38976390 -160653760 + L1M4 LINE L1 4256 4955 -1191 2089 134 0 0 chr5 38976399 38976690 -160653460 - AluSx SINE Alu -21 291 1 518 244 75 25 chr5 38977765 38977966 -160652184 + MLT1J LTR MaLR 5 215 -296 1427 126 24 5 chr5 38978492 38978699 -160651451 - AluJb SINE Alu -17 295 85 246 32 0 0 chr5 38979630 38979661 -160650489 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 1076 180 11 6 chr5 38980077 38980260 -160649890 - AluJo SINE Alu -128 184 1 920 242 21 0 chr5 38982005 38982199 -160647951 - MER58A DNA MER1_type -1 223 26 24 32 0 0 chr5 38982238 38982269 -160647881 + AT_rich Low_complexity Low_complexity 1 31 0 263 268 102 51 chr5 38982304 38982461 -160647689 - L2 LINE L2 -12 3301 3137 2164 136 0 7 chr5 38982559 38982867 -160647283 + AluSx SINE Alu 1 306 -6 223 253 0 33 chr5 38983130 38983221 -160646929 + CT-rich Low_complexity Low_complexity 1 88 0 326 302 12 0 chr5 38983732 38983818 -160646332 + L2 LINE L2 3213 3299 -14 21 36 0 0 chr5 38984774 38984802 -160645348 + AT_rich Low_complexity Low_complexity 1 28 0 184 331 83 8 chr5 38985073 38985194 -160644956 - MIR SINE MIR -123 139 10 668 267 56 6 chr5 38987526 38987706 -160642444 + MIR SINE MIR 32 220 -42 1860 225 72 19 chr5 38990089 38991145 -160639005 - L1ME2 LINE L1 -12 6152 5008 328 43 0 0 chr5 38991146 38991192 -160638958 - L1PA3 LINE L1 0 6155 6110 27911 46 5 2 chr5 38991293 38994999 -160635151 - L1P LINE L1 -1014 5132 1419 296 263 86 7 chr5 38995145 38995297 -160634853 - L1ME2 LINE L1 -2755 3391 3228 203 116 47 0 chr5 38996235 38996278 -160633872 + CT-rich Low_complexity Low_complexity 4 48 0 1410 202 55 55 chr5 38996377 38996758 -160633392 - MLT2C2 LTR ERVL -2 462 82 251 258 0 30 chr5 38997813 38997879 -160632271 + MER91 DNA MER1_type 119 182 -8 189 265 0 0 chr5 38998020 38998069 -160632081 + MIR SINE MIR 101 149 -113 385 237 92 27 chr5 38999048 38999440 -160630710 - MLT1J2 LTR MaLR 0 446 1 2114 109 3 0 chr5 39000693 39000976 -160629174 - AluSx SINE Alu -23 289 6 22 35 0 0 chr5 39000980 39001009 -160629141 + AT_rich Low_complexity Low_complexity 1 29 0 182 298 0 0 chr5 39001125 39001182 -160628968 + L3 LINE CR1 1362 1418 -159 418 297 113 57 chr5 39001191 39001602 -160628548 + L1MC/D LINE L1 5144 5576 -757 386 291 24 0 chr5 39003794 39003921 -160626229 - MIR3 SINE MIR -49 159 30 258 273 0 30 chr5 39005226 39005325 -160624825 + GA-rich Low_complexity Low_complexity 4 99 0 451 291 46 70 chr5 39005325 39005585 -160624565 - MIR SINE MIR 0 262 14 434 275 0 8 chr5 39005633 39005753 -160624397 + MER94 DNA DNA 5 123 -11 212 327 0 0 chr5 39006785 39006840 -160623310 - L2 LINE L2 -13 3259 3205 23 0 0 0 chr5 39006914 39006937 -160623213 + AT_rich Low_complexity Low_complexity 1 23 0 316 270 99 0 chr5 39007158 39007269 -160622881 - MIR SINE MIR -82 180 59 430 170 21 32 chr5 39008155 39008249 -160621901 + Charlie3 DNA MER1_type 2620 2712 0 217 189 11 42 chr5 39008843 39008938 -160621212 + CT-rich Low_complexity Low_complexity 1 92 0 2177 233 71 43 chr5 39008938 39009227 -160620923 - MLT1E LTR MaLR -42 551 272 216 86 0 0 chr5 39009227 39009262 -160620888 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1994 109 3 21 chr5 39009263 39009548 -160620602 - AluSx SINE Alu -32 280 1 2177 233 71 43 chr5 39009548 39009792 -160620358 - MLT1E LTR MaLR -320 273 1 2581 178 30 19 chr5 39009896 39010358 -160619792 + MLT1C LTR MaLR 1 467 0 460 250 48 125 chr5 39011073 39011385 -160618765 + L2 LINE L2 2922 3209 -104 192 379 35 9 chr5 39011585 39011701 -160618449 + L2 LINE L2 2639 2757 -557 2421 139 123 3 chr5 39011711 39012093 -160618057 + MSTA LTR MaLR 1 428 0 2115 210 42 36 chr5 39012118 39012617 -160617533 - MLT1D LTR MaLR 0 505 4 321 354 63 56 chr5 39012693 39012978 -160617172 + L2 LINE L2 2986 3272 0 24 0 0 0 chr5 39013961 39013985 -160616165 + AT_rich Low_complexity Low_complexity 1 24 0 561 308 25 14 chr5 39013994 39014273 -160615877 + L1ME4a LINE L1 4023 4304 -1842 385 281 149 61 chr5 39014472 39015010 -160615140 + L1ME4a LINE L1 4639 5223 -923 232 354 68 14 chr5 39015063 39015343 -160614807 + L1ME4a LINE L1 5280 5574 -588 233 170 0 19 chr5 39015431 39015484 -160614666 + L1ME4a LINE L1 5768 5819 -302 390 197 87 94 chr5 39015825 39015952 -160614198 - MLT1H LTR MaLR 0 549 424 617 270 143 44 chr5 39016008 39016301 -160613849 - MLT1H LTR MaLR -221 328 7 268 200 0 0 chr5 39016877 39016932 -160613218 + L1ME4a LINE L1 5956 6010 -111 408 241 0 0 chr5 39017020 39017136 -160613014 + (TA)n Simple_repeat Simple_repeat 1 116 0 228 140 40 40 chr5 39017137 39017187 -160612963 + L1MD3 LINE L1 6619 6668 -1327 26 64 0 0 chr5 39017192 39017239 -160612911 + AT_rich Low_complexity Low_complexity 1 47 0 291 246 14 101 chr5 39018033 39018171 -160611979 + L2 LINE L2 3187 3312 -1 218 245 19 0 chr5 39018170 39018223 -160611927 + L2 LINE L2 2283 2336 -978 * 243 306 14 0 chr5 39018706 39018778 -160611372 - MER21A LTR ERV1 -127 804 732 1228 179 4 52 chr5 39018858 39019113 -160611037 - MLT2C2 LTR ERVL 0 464 232 774 150 0 21 chr5 39019144 39019284 -160610866 - MLT1A1 LTR MaLR -228 137 1 2186 222 116 21 chr5 39019361 39020023 -160610127 + MER50 LTR ERV1 10 734 0 4470 134 15 126 chr5 39020366 39021918 -160608232 - pTR5 LTR ERV1 0 2606 1524 466 254 154 110 chr5 39022246 39022675 -160607475 + MLT1J2 LTR MaLR 2 449 -1 2256 73 0 57 chr5 39023278 39023595 -160606555 + AluY SINE Alu 1 299 -12 233 125 0 42 chr5 39024403 39024451 -160605699 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 452 163 12 0 chr5 39025045 39025125 -160605025 - MER3 DNA MER1_type 0 209 129 201 217 52 9 chr5 39025125 39025240 -160604910 + (TA)n Simple_repeat Simple_repeat 2 121 0 863 191 0 0 chr5 39025304 39025451 -160604699 - MER3 DNA MER1_type -62 147 1 2034 117 3 7 chr5 39026290 39026626 -160603524 - AluSq SINE Alu 0 335 1 23 0 0 0 chr5 39026884 39026907 -160603243 + AT_rich Low_complexity Low_complexity 1 23 0 2003 147 3 3 chr5 39028972 39029284 -160600866 + AluSx SINE Alu 1 312 0 225 239 141 0 chr5 39029798 39029869 -160600281 + L2 LINE L2 3233 3313 0 198 0 0 0 chr5 39031237 39031259 -160598891 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1922 118 25 21 chr5 39031897 39032201 -160597949 - AluSx SINE Alu 0 305 1 359 335 17 39 chr5 39034257 39034436 -160595714 + MER5A DNA MER1_type 2 176 -13 25 0 0 0 chr5 39034633 39034658 -160595492 + AT_rich Low_complexity Low_complexity 1 25 0 421 228 34 114 chr5 39034801 39035038 -160595112 + MLT1J LTR MaLR 101 318 -193 29 0 0 0 chr5 39035779 39035808 -160594342 + AT_rich Low_complexity Low_complexity 1 29 0 185 286 65 0 chr5 39036462 39036539 -160593611 + MIR SINE MIR 172 253 -9 336 337 26 26 chr5 39036627 39036798 -160593352 - MER5A DNA MER1_type -4 185 4 21 0 0 0 chr5 39037954 39037975 -160592175 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr5 39039178 39039202 -160590948 + (CA)n Simple_repeat Simple_repeat 1 24 0 1167 202 85 8 chr5 39039204 39039462 -160590688 + L1MC3 LINE L1 5909 6186 -1599 * 3619 186 66 5 chr5 39039437 39040190 -160589960 + L1MC3 LINE L1 6845 7643 -142 43321 50 3 1 chr5 39040211 39046348 -160583802 + L1PA4 LINE L1 1 6152 -3 5426 94 42 7 chr5 39046351 39047083 -160583067 + L1PA7 LINE L1 5384 6141 -13 189 0 0 0 chr5 39047649 39047670 -160582480 + (TA)n Simple_repeat Simple_repeat 1 21 0 387 212 25 76 chr5 39049298 39049416 -160580734 - MIR3 SINE MIR -31 177 66 303 273 5 127 chr5 39050221 39050441 -160579709 + MIR3 SINE MIR 16 208 0 2811 178 34 2 chr5 39051883 39052378 -160577772 + L1MB5 LINE L1 5656 6166 -8 568 132 28 0 chr5 39052395 39052501 -160577649 + L1MA8 LINE L1 6183 6291 0 458 242 11 0 chr5 39052560 39052655 -160577495 - MIR SINE MIR -86 176 81 400 286 140 12 chr5 39052661 39052832 -160577318 - MIR3 SINE MIR 0 208 16 258 351 36 56 chr5 39053732 39053983 -160576167 - L2 LINE L2 -189 3083 2838 2412 81 3 0 chr5 39054267 39054575 -160575575 + AluSx SINE Alu 1 309 -3 1357 182 40 121 chr5 39056403 39056799 -160573351 - MLT1A1 LTR MaLR -1 364 1 1053 191 9 61 chr5 39057066 39057296 -160572854 + MER20 DNA MER1_type 2 219 0 181 329 0 12 chr5 39057311 39057393 -160572757 + MER5B DNA MER1_type 28 108 -70 288 351 95 24 chr5 39057580 39057748 -160572402 - MIR SINE MIR -35 227 48 2304 84 7 26 chr5 39057752 39058060 -160572090 - AluSg SINE Alu -8 302 1 27 0 0 0 chr5 39058843 39058870 -160571280 + AT_rich Low_complexity Low_complexity 1 27 0 810 256 42 0 chr5 39058926 39059094 -160571056 - MER96 DNA MER1_type 0 175 1 205 297 242 0 chr5 39059094 39059185 -160570965 - L2 LINE L2 -7 3306 3194 334 287 60 48 chr5 39059378 39059643 -160570507 + MLT1L LTR MaLR 237 615 0 299 299 97 29 chr5 39060854 39061117 -160569033 - MLT1L LTR MaLR -227 284 1 860 271 0 0 chr5 39061424 39061623 -160568527 + MER58A DNA MER1_type 26 224 0 307 269 67 42 chr5 39061773 39061929 -160568221 - MIR SINE MIR -67 141 30 1360 278 91 35 chr5 39062869 39063362 -160566788 + LTR33 LTR ERVL 1 521 0 2026 150 0 7 chr5 39063803 39064103 -160566047 - AluJo SINE Alu -12 300 3 484 322 184 43 chr5 39064146 39065990 -160564160 + L2 LINE L2 906 3009 -263 186 296 28 70 chr5 39066072 39066143 -160564007 + L2 LINE L2 3153 3220 -52 387 0 0 0 chr5 39067865 39067908 -160562242 + (CA)n Simple_repeat Simple_repeat 2 44 0 2710 281 97 30 chr5 39068584 39069744 -160560406 + ERVL LTR ERVL 87 1324 -4440 2560 87 43 0 chr5 39069793 39070139 -160560011 + L1PA11 LINE L1 5808 6168 -6 429 257 43 45 chr5 39070234 39070529 -160559621 + MERVL-C1 LTR ERVL 5064 5427 -337 504 171 86 26 chr5 39070574 39070691 -160559459 + MERVL-C1 LTR ERVL 5535 5658 -106 715 194 44 44 chr5 39070704 39070982 -160559168 + MLT2C1 LTR ERVL 27 395 -2 957 279 29 49 chr5 39070989 39071336 -160558814 + L1M4b LINE L1 162 501 -5783 1549 205 92 49 chr5 39071382 39071807 -160558343 - MST-int LTR MaLR 0 1651 1209 340 22 22 0 chr5 39072347 39072392 -160557758 + MADE1 DNA Mariner 1 46 -34 2876 147 6 51 chr5 39072622 39073111 -160557039 - LTR24 LTR ERV1 0 467 1 2141 118 10 0 chr5 39073661 39073958 -160556192 - AluSx SINE Alu -12 300 1 202 311 22 72 chr5 39073959 39074139 -160556011 + MIR3 SINE MIR 36 206 -2 2190 157 48 45 chr5 39075421 39075862 -160554288 - MER65A LTR ERV1 0 445 4 751 218 0 0 chr5 39076332 39076465 -160553685 + FLAM_A SINE Alu 1 133 0 456 263 53 53 chr5 39076763 39076972 -160553178 - L2 LINE L2 0 3313 3105 487 226 57 85 chr5 39077023 39077239 -160552911 + L1MC5 LINE L1 7614 7824 -137 2321 137 117 10 chr5 39077239 39077625 -160552525 - MSTA LTR MaLR -1 427 1 487 226 57 85 chr5 39077625 39077656 -160552494 + L1MC5 LINE L1 7824 7854 -107 2393 59 0 62 chr5 39077675 39077998 -160552152 - AluY SINE Alu -8 303 1 3600 252 106 67 chr5 39078205 39080044 -160550106 - L1MC4 LINE L1 -133 7769 5765 238 319 61 27 chr5 39080036 39080412 -160549738 - L1MC4 LINE L1 -852 5294 4906 * 253 368 109 47 chr5 39080412 39080814 -160549336 - L2 LINE L2 -42 3230 2804 575 305 77 48 chr5 39083406 39083823 -160546327 - L2 LINE L2 0 3313 2885 1568 214 14 103 chr5 39086142 39086735 -160543415 - L1M4 LINE L1 -3293 2853 2314 306 297 9 63 chr5 39087553 39087664 -160542486 + L1M4b LINE L1 540 644 -5740 1038 252 125 34 chr5 39087699 39088241 -160541909 + L1M4b LINE L1 777 1433 -4870 * 1896 240 46 43 chr5 39088232 39088883 -160541267 + L1 LINE L1 4210 4862 -1284 4606 153 88 16 chr5 39088889 39089659 -160540491 - LTR1B LTR ERV1 0 826 1 16908 141 28 36 chr5 39089659 39092445 -160537705 - HUERS-P2 LTR ERV1 0 3088 325 886 171 6 34 chr5 39092448 39092623 -160537527 + L1MB3 LINE L1 6011 6180 -3 387 252 61 0 chr5 39093269 39093384 -160536766 + MER5B DNA MER1_type 1 122 -56 480 266 79 0 chr5 39093623 39093762 -160536388 - MER96 DNA MER1_type? -5 170 21 21 36 0 0 chr5 39094401 39094429 -160535721 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 39094964 39094987 -160535163 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 39095418 39095462 -160534688 + AT_rich Low_complexity Low_complexity 1 44 0 265 232 21 0 chr5 39096310 39096405 -160533745 + (TCCA)n Simple_repeat Simple_repeat 4 100 0 309 352 14 21 chr5 39096867 39097009 -160533141 - MIR SINE MIR -102 160 20 601 263 16 27 chr5 39097157 39097343 -160532807 + LTR52 LTR ERVL 1 184 -237 1519 275 33 31 chr5 39097354 39097809 -160532341 + HERVL74 LTR ERVL 212 667 -2889 2858 263 45 13 chr5 39098056 39098367 -160531783 + HERVL74 LTR ERVL 998 1298 -2279 2455 91 46 70 chr5 39098367 39098589 -160531561 - THE1B LTR MaLR 0 364 153 2255 101 0 10 chr5 39098589 39098885 -160531265 + AluSc SINE Alu 1 293 -16 2455 91 46 70 chr5 39098885 39099035 -160531115 - THE1B LTR MaLR -211 153 1 2858 263 45 13 chr5 39099035 39099792 -160530358 + HERVL74 LTR ERVL 1298 2095 -1482 360 64 0 0 chr5 39099934 39099981 -160530169 + (CA)n Simple_repeat Simple_repeat 2 48 0 1504 266 51 72 chr5 39099986 39100615 -160529535 + L1M4b LINE L1 113 728 -6131 1711 180 6 49 chr5 39100626 39100976 -160529174 + MLT2C1 LTR ERVL 4 338 -59 360 0 0 0 chr5 39100977 39101017 -160529133 + (TG)n Simple_repeat Simple_repeat 2 41 0 1490 268 94 9 chr5 39101174 39101630 -160528520 + ERVL-C1 LTR ERVL 211 705 -5059 3102 256 73 11 chr5 39101709 39103392 -160526758 + ERVL-C1 LTR ERVL 880 2769 -2995 5766 195 10 16 chr5 39103393 39104151 -160525999 + ERVL-C1 LTR ERVL 3887 4635 -1129 1184 40 7 14 chr5 39104151 39104168 -160525982 - L1PA5 LINE L1 0 6154 6138 181 77 0 0 chr5 39104168 39104194 -160525956 + (TTTA)n Simple_repeat Simple_repeat 3 168 0 1184 40 7 14 chr5 39104194 39104324 -160525826 - L1PA5 LINE L1 -16 6138 6008 5766 195 10 16 chr5 39104324 39104847 -160525303 + ERVL-C1 LTR ERVL 4635 5160 -604 496 197 96 50 chr5 39104847 39105040 -160525110 + L1M3 LINE L1 5465 5661 -512 1771 185 20 0 chr5 39105040 39105343 -160524807 + AluJo SINE Alu 1 309 -3 496 197 96 50 chr5 39105343 39105356 -160524794 + L1M3 LINE L1 5661 5672 -501 951 100 17 22 chr5 39105356 39105408 -160524742 + (GAAA)n Simple_repeat Simple_repeat 1 230 0 951 100 17 22 chr5 39105408 39105588 -160524562 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1182 225 47 63 chr5 39105656 39105843 -160524307 + L1ME1 LINE L1 5678 5866 -300 2325 167 64 17 chr5 39105843 39106250 -160523900 + MSTB LTR MaLR 1 426 0 1182 225 47 63 chr5 39106250 39106507 -160523643 + L1ME1 LINE L1 5866 6115 -51 2021 131 3 3 chr5 39106517 39106808 -160523342 - AluSx SINE Alu -10 302 12 2069 132 73 51 chr5 39106810 39107166 -160522984 - THE1B LTR MaLR 0 364 1 3525 109 2 0 chr5 39107166 39107645 -160522505 - THE1B-int LTR MaLR 0 1580 1101 3988 83 59 16 chr5 39107647 39108223 -160521927 - THE1B-int LTR MaLR -979 601 1 2254 121 72 26 chr5 39108223 39108571 -160521579 - THE1B LTR MaLR 0 364 1 557 309 193 15 chr5 39108683 39109088 -160521062 + L1MEc LINE L1 49 525 -5871 1000 144 13 0 chr5 39109675 39109828 -160520322 + L1MA4 LINE L1 5 159 -5169 8047 153 33 29 chr5 39109831 39111253 -160518897 + MSTA-int LTR MaLR 153 1580 0 1962 185 123 5 chr5 39111253 39111636 -160518514 + MSTA LTR MaLR 1 428 0 5414 183 16 14 chr5 39111636 39112782 -160517368 + L1MA4 LINE L1 3424 4571 -1757 278 291 40 53 chr5 39112892 39112953 -160517197 + MIR SINE MIR 103 163 -99 2166 133 0 0 chr5 39112953 39113253 -160516897 - AluSx SINE Alu -12 300 1 278 291 40 53 chr5 39113253 39113342 -160516808 + MIR SINE MIR 163 251 -11 5172 177 43 7 chr5 39113548 39115448 -160514702 + L1MA4 LINE L1 4527 6476 -6 324 337 30 0 chr5 39116237 39116338 -160513812 + MIR SINE MIR 37 140 -68 2124 38 0 30 chr5 39118330 39118597 -160511553 + AluY SINE Alu 49 307 -4 323 265 43 43 chr5 39118695 39118812 -160511338 + MIR3 SINE MIR 85 201 -7 243 103 0 0 chr5 39120776 39120821 -160509329 + (CA)n Simple_repeat Simple_repeat 1 84 0 243 103 0 0 chr5 39120821 39120860 -160509290 + (CA)n Simple_repeat Simple_repeat 1 39 0 1343 175 129 10 chr5 39121298 39121607 -160508543 + MER4A LTR ERV1 1 346 -318 624 173 251 62 chr5 39121632 39121663 -160508487 + MER4C LTR ERV1 159 183 -282 2416 75 0 0 chr5 39121663 39121955 -160508195 + AluSc SINE Alu 1 292 -17 624 173 251 62 chr5 39121955 39122166 -160507984 + MER4C LTR ERV1 183 447 -18 1339 179 146 94 chr5 39122187 39122386 -160507764 + MER4C-int LTR ERV1 1 188 -6410 243 0 0 0 chr5 39122386 39122413 -160507737 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1339 179 146 94 chr5 39122413 39122810 -160507340 + MER4C-int LTR ERV1 188 628 -5970 365 635 0 6 chr5 39122814 39122970 -160507180 + (TG)n Simple_repeat Simple_repeat 2 156 0 269 305 39 49 chr5 39124019 39124222 -160505928 + MER4C-int LTR ERV1 1235 1435 -5366 387 312 43 34 chr5 39125682 39126008 -160504142 + MER110-int LTR ERV1 2549 2634 -4167 2168 105 3 7 chr5 39126030 39126325 -160503825 - AluSg SINE Alu -16 294 1 295 363 40 27 chr5 39126496 39126972 -160503178 + MER110-int LTR ERV1 3160 3641 -3481 355 309 109 78 chr5 39127015 39127474 -160502676 + MER110-int LTR ERV1 3381 3853 -2948 2352 77 0 3 chr5 39127509 39127808 -160502342 + AluY SINE Alu 1 298 -13 367 294 47 47 chr5 39128379 39128549 -160501601 + MER110-int LTR ERV1 2137 2306 -2341 183 231 0 77 chr5 39128557 39128622 -160501528 + L2 LINE L2 2527 2586 -728 392 301 65 75 chr5 39128634 39129113 -160501037 + MER110-int LTR ERV1 2390 2863 -1784 1107 319 52 36 chr5 39129470 39130257 -160499893 + MER110-int LTR ERV1 5633 6432 -690 900 302 8 8 chr5 39130372 39130640 -160499510 - PABL_B-int LTR ERV1 -439 6683 6416 330 87 0 0 chr5 39130689 39130735 -160499415 + (TG)n Simple_repeat Simple_repeat 2 47 0 1791 170 0 0 chr5 39130736 39131018 -160499132 - AluJb SINE Alu -26 286 5 35 54 0 0 chr5 39131022 39131078 -160499072 + AT_rich Low_complexity Low_complexity 1 56 0 1687 152 42 18 chr5 39131124 39131407 -160498743 - AluSx SINE Alu -22 290 1 330 312 114 57 chr5 39131458 39131775 -160498375 - L1MEc LINE L1 -4630 1754 1420 233 224 9 75 chr5 39131783 39131890 -160498260 - L1MEc LINE L1 -5037 1526 1427 228 254 0 0 chr5 39131922 39131981 -160498169 + T-rich Low_complexity Low_complexity 1 59 0 2105 133 54 101 chr5 39132372 39133043 -160497107 + MER4E LTR ERV1 1 759 -7 1156 267 157 33 chr5 39133239 39133845 -160496305 - LTR50 LTR ERVL -111 684 4 2078 175 85 15 chr5 39133905 39134305 -160495845 - MSTA LTR MaLR 0 428 1 8145 198 34 9 chr5 39134305 39134391 -160495759 - MSTA-int LTR MaLR 0 1651 1569 5178 60 51 0 chr5 39134391 39135019 -160495131 - PABL_A LTR ERV1 0 660 1 8145 198 34 9 chr5 39135019 39136538 -160493612 - MSTA-int LTR MaLR -82 1569 5 1794 183 0 0 chr5 39136540 39136825 -160493325 - AluSx SINE Alu -23 289 5 1854 179 117 8 chr5 39136850 39137225 -160492925 - MSTA LTR MaLR -12 416 1 7021 228 68 43 chr5 39137225 39138837 -160491313 - MSTA-int LTR MaLR 0 1651 1 1972 179 79 55 chr5 39138837 39138878 -160491272 - MSTA LTR MaLR 0 428 389 2077 130 0 31 chr5 39138878 39139200 -160490950 + AluSx SINE Alu 1 312 0 1972 179 79 55 chr5 39139200 39139576 -160490574 - MSTA LTR MaLR -39 389 1 1695 157 118 21 chr5 39140028 39140366 -160489784 + THE1C LTR MaLR 1 371 -4 279 257 0 14 chr5 39140485 39140555 -160489595 + MLT1E1 LTR MaLR 5 73 -581 2694 102 42 49 chr5 39140555 39140986 -160489164 + MSTA LTR MaLR 1 428 0 631 164 109 0 chr5 39140986 39141114 -160489036 + MSTA-int LTR MaLR 1 142 -1509 1973 135 47 75 chr5 39141114 39141500 -160488650 + THE1C LTR MaLR 1 375 0 9511 158 37 7 chr5 39141501 39143034 -160487116 + THE1C-int LTR MaLR 2 1580 0 1595 154 63 83 chr5 39143034 39143419 -160486731 + THE1C LTR MaLR 1 390 -38 2128 127 3 13 chr5 39143419 39143734 -160486416 - AluSx SINE Alu 0 312 1 1595 154 63 83 chr5 39143734 39143773 -160486377 + THE1C LTR MaLR 390 428 0 7599 195 43 16 chr5 39143773 39145247 -160484903 + MSTA-int LTR MaLR 138 1651 0 2280 174 38 21 chr5 39145247 39145666 -160484484 + MSTA LTR MaLR 1 426 -2 1980 227 92 53 chr5 39145669 39146232 -160483918 + MLT1E1 LTR MaLR 70 654 0 472 333 104 4 chr5 39146402 39146633 -160483517 + L1MEd LINE L1 121 374 -6022 1181 187 57 66 chr5 39147177 39147509 -160482641 - L1MC4 LINE L1 -715 7327 6999 * 9302 168 15 21 chr5 39147498 39148150 -160482000 - L1PB1 LINE L1 0 6867 6212 2247 91 28 0 chr5 39148150 39148436 -160481714 + AluSc SINE Alu 1 294 -15 9302 168 15 21 chr5 39148436 39148479 -160481671 - L1PB1 LINE L1 -655 6212 6170 1966 135 3 0 chr5 39148479 39148811 -160481339 - AluSx SINE Alu 0 333 1 9302 168 15 21 chr5 39148811 39150984 -160479166 - L1PB1 LINE L1 -697 6170 4012 2054 101 102 46 chr5 39150986 39151400 -160478750 - LTR14B LTR ERVK 0 608 1 5774 175 66 2 chr5 39151404 39152701 -160477449 - L1PB1 LINE L1 -2848 4014 2634 2784 122 18 0 chr5 39152700 39153214 -160476936 + L1PBa LINE L1 997 1704 -5159 * 2256 106 0 16 chr5 39153799 39154111 -160476039 + AluSx SINE Alu 1 307 -5 209 253 76 38 chr5 39154239 39154318 -160475832 + L2 LINE L2 2412 2493 -821 2038 144 33 36 chr5 39157406 39157768 -160472382 + THE1C LTR MaLR 14 374 -1 792 258 89 59 chr5 39158088 39158682 -160471468 + L1MEd LINE L1 678 1289 -4916 319 302 39 0 chr5 39158926 39159055 -160471095 + LTR67 LTR ERVL 403 536 -21 519 280 7 7 chr5 39159150 39159293 -160470857 + L2 LINE L2 3171 3313 0 298 284 74 0 chr5 39159963 39160044 -160470106 + L2 LINE L2 3186 3272 0 664 188 62 45 chr5 39161727 39161854 -160468296 + L1MB4 LINE L1 6000 6132 -48 1812 140 0 58 chr5 39161854 39162162 -160467988 + AluSx SINE Alu 1 290 -22 664 188 62 45 chr5 39162162 39162210 -160467940 + L1MB4 LINE L1 6132 6178 -2 10280 32 0 1 chr5 39162225 39164151 -160465999 - L1PA3 LINE L1 -5 6150 4229 272 175 0 0 chr5 39164254 39164294 -160465856 - MER2 DNA MER2_type -305 40 1 811 270 104 50 chr5 39164306 39164336 -160465814 + MLT1J1 LTR MaLR 2 29 -417 2186 119 3 7 chr5 39164336 39164638 -160465512 - AluSq SINE Alu -12 301 1 811 270 104 50 chr5 39164638 39165029 -160465121 + MLT1J1 LTR MaLR 29 446 0 730 278 64 4 chr5 39166196 39166430 -160463720 - LTR16A LTR ERVL 0 450 203 263 224 17 0 chr5 39166466 39166524 -160463626 - LTR16A1 LTR ERVL -336 121 63 310 303 40 36 chr5 39168131 39168309 -160461841 + MIR SINE MIR 14 193 -63 749 276 33 16 chr5 39168833 39169076 -160461074 - MIR SINE MIR -8 254 8 2213 94 3 3 chr5 39169813 39170101 -160460049 - AluSx SINE Alu -18 294 7 1052 247 120 44 chr5 39174413 39174895 -160455255 - LTR33A LTR ERVL -4 519 1 389 256 111 26 chr5 39175575 39175692 -160454458 + L2 LINE L2 3187 3313 0 190 215 13 101 chr5 39175879 39175899 -160454251 + MER5A DNA MER1_type 1 13 -176 312 262 221 14 chr5 39175899 39176044 -160454106 - MER5B DNA MER1_type -3 175 1 1908 203 3 14 chr5 39176672 39177017 -160453133 + MER58B DNA MER1_type 1 341 0 667 282 73 54 chr5 39177190 39177668 -160452482 - LTR33 LTR ERVL -6 515 29 1203 173 106 4 chr5 39178120 39178357 -160451793 + MER2 DNA MER2_type 83 343 -2 6464 180 88 13 chr5 39181524 39182966 -160447184 - Looper DNA T2_type -1 1557 8 1042 122 13 0 chr5 39183038 39183194 -160446956 + L1MB3 LINE L1 6026 6183 0 228 279 90 57 chr5 39183548 39183670 -160446480 - L2 LINE L2 -21 3251 3167 526 340 46 17 chr5 39184054 39184292 -160445858 + MIR SINE MIR 12 256 -6 2228 158 48 5 chr5 39184805 39185179 -160444971 + MLT1B LTR MaLR 1 390 0 378 233 121 17 chr5 39185568 39185684 -160444466 + MIR SINE MIR 71 198 -64 234 0 0 0 chr5 39186861 39186887 -160443263 + (TG)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr5 39187013 39187041 -160443109 + AT_rich Low_complexity Low_complexity 1 28 0 1476 263 11 3 chr5 39189554 39189923 -160440227 - LTR16A LTR ERVL -60 390 19 4285 271 64 34 chr5 39190376 39190752 -160439398 - HERV16 LTR ERVL -3507 1489 1126 867 222 88 5 chr5 39190752 39190946 -160439204 - MER58C DNA MER1_type -3 212 3 4285 271 64 34 chr5 39190946 39191984 -160438166 - HERV16 LTR ERVL -3870 1126 33 736 295 51 5 chr5 39192011 39192228 -160437922 - LTR16A LTR ERVL -18 432 206 1431 100 10 69 chr5 39192235 39192526 -160437624 - L1PA6 LINE L1 -2 6152 5879 24425 47 9 3 chr5 39193077 39196741 -160433409 + L1PA4 LINE L1 2279 5958 -197 7284 232 24 41 chr5 39196853 39198013 -160432137 + L1 LINE L1 2358 3468 -2678 1630 196 0 0 chr5 39198013 39198288 -160431862 + AluJb SINE Alu 1 275 -37 7284 232 24 41 chr5 39198288 39199187 -160430963 + L1 LINE L1 3468 4381 -1765 605 100 0 0 chr5 39199200 39199280 -160430870 + L1MA3 LINE L1 6222 6301 -4 2416 75 0 0 chr5 39199307 39199599 -160430551 + AluSc SINE Alu 1 292 -17 628 172 276 27 chr5 39199599 39199810 -160430340 + MER4C LTR ERV1 178 447 -18 1374 174 147 100 chr5 39199831 39200030 -160430120 + MER4C-int LTR ERV1 1 189 -6409 243 0 0 0 chr5 39200030 39200057 -160430093 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1374 174 147 100 chr5 39200057 39200459 -160429691 + MER4C-int LTR ERV1 189 636 -5962 268 23 0 47 chr5 39200459 39200502 -160429648 + (TG)n Simple_repeat Simple_repeat 2 42 0 1374 174 147 100 chr5 39200502 39200537 -160429613 + MER4C-int LTR ERV1 636 668 -5930 1594 110 12 41 chr5 39201590 39201836 -160428314 - MER1B DNA MER1_type 0 339 101 250 179 0 0 chr5 39201841 39201880 -160428270 - MER1B DNA MER1_type -298 39 1 24 0 0 0 chr5 39202792 39202816 -160427334 + AT_rich Low_complexity Low_complexity 1 24 0 422 274 40 8 chr5 39203631 39203755 -160426395 + MIR SINE MIR 62 189 -73 183 293 0 0 chr5 39204240 39204281 -160425869 + L2 LINE L2 3224 3264 -8 861 178 0 0 chr5 39204649 39204778 -160425372 + FLAM_A SINE Alu 2 130 -3 355 303 58 110 chr5 39205495 39205977 -160424173 + L2 LINE L2 2856 3312 -1 361 246 53 0 chr5 39208195 39208309 -160421841 + MER103 DNA DNA 44 163 -3 319 275 92 0 chr5 39208494 39208603 -160421547 + MIR3 SINE MIR 59 177 -31 767 268 33 24 chr5 39211132 39211345 -160418805 - MIR SINE MIR -41 221 7 200 257 97 18 chr5 39212169 39212282 -160417868 - MIR SINE MIR -129 133 12 189 0 0 0 chr5 39212431 39212452 -160417698 + (A)n Simple_repeat Simple_repeat 1 21 0 246 247 14 27 chr5 39213255 39213328 -160416822 + MER5A DNA MER1_type 44 115 -74 209 333 0 0 chr5 39213312 39213363 -160416787 - MER5B DNA MER1_type -127 51 1 * 225 0 0 0 chr5 39214079 39214104 -160416046 + (TG)n Simple_repeat Simple_repeat 1 25 0 307 284 20 39 chr5 39214702 39214804 -160415346 + L1MC4a LINE L1 5974 6073 -1735 256 295 0 2 chr5 39215084 39215182 -160414968 + L1MC4 LINE L1 6431 6539 -1281 780 232 63 14 chr5 39215187 39215472 -160414678 - L1MC4 LINE L1 -828 7214 6916 303 130 0 0 chr5 39215613 39215667 -160414483 + (TG)n Simple_repeat Simple_repeat 2 55 0 305 243 104 60 chr5 39215689 39215957 -160414193 + L1MC4 LINE L1 7703 7982 -60 2219 134 0 0 chr5 39217017 39217324 -160412826 + AluSp SINE Alu 1 307 -6 312 279 101 101 chr5 39218651 39218794 -160411356 - L2 LINE L2 0 3272 3127 261 0 0 0 chr5 39218794 39218823 -160411327 + (TG)n Simple_repeat Simple_repeat 1 29 0 312 279 101 101 chr5 39218823 39218916 -160411234 - L2 LINE L2 -144 3128 3036 286 255 75 43 chr5 39220498 39220592 -160409558 - MIR SINE MIR -116 146 50 362 268 313 17 chr5 39221455 39221634 -160408516 + MIR SINE MIR 15 246 -16 195 189 27 0 chr5 39224027 39224064 -160406086 + MIR SINE MIR 108 145 -63 2625 113 9 64 chr5 39224441 39224849 -160405301 + MSTA LTR MaLR 1 383 -45 1598 210 30 3 chr5 39224849 39225027 -160405123 - AluJb SINE Alu 0 312 121 180 0 0 0 chr5 39225027 39225047 -160405103 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1598 210 30 3 chr5 39225047 39225168 -160404982 - AluJb SINE Alu -191 121 5 2625 113 9 64 chr5 39225168 39225212 -160404938 + MSTA LTR MaLR 383 428 0 249 325 43 0 chr5 39225616 39225779 -160404371 + MER102b DNA MER1_type 164 333 -8 2453 57 0 0 chr5 39225969 39226270 -160403880 - AluY SINE Alu -6 305 5 1247 91 0 0 chr5 39227349 39227514 -160402636 + AluY SINE Alu 144 308 -3 7002 48 17 43 chr5 39228397 39229486 -160400664 - L1PA7 LINE L1 -1 6153 5066 2647 86 0 20 chr5 39229799 39229930 -160400220 - L1PA7 LINE L1 -1309 4837 4705 2514 69 3 0 chr5 39229930 39230233 -160399917 - AluY SINE Alu -7 304 1 2647 86 0 20 chr5 39230233 39230507 -160399643 - L1PA7 LINE L1 -1441 4705 4440 * 6500 92 4 14 chr5 39230506 39231488 -160398662 + L1P LINE L1 1730 2701 -3445 9188 129 26 18 chr5 39231864 39232418 -160397732 - L1M1 LINE L1 -4872 2693 2145 1755 148 16 30 chr5 39232418 39232723 -160397427 - AluJb SINE Alu -11 301 1 9188 129 26 18 chr5 39232723 39233744 -160396406 - L1M1 LINE L1 -5420 2145 1105 710 130 35 0 chr5 39233742 39233857 -160396293 - L1M1 LINE L1 -7431 134 16 * 190 351 54 60 chr5 39235145 39235313 -160394837 + L2 LINE L2 2856 3022 -250 240 35 0 0 chr5 39236209 39236238 -160393912 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 946 152 0 0 chr5 39236255 39236393 -160393757 - AluJb SINE Alu -171 141 4 41 72 0 0 chr5 39237403 39237486 -160392664 + AT_rich Low_complexity Low_complexity 1 83 0 256 159 0 0 chr5 39237721 39237765 -160392385 - MIR SINE MIR -148 114 71 36 70 0 0 chr5 39238129 39238200 -160391950 + AT_rich Low_complexity Low_complexity 1 71 0 1731 148 86 12 chr5 39239156 39239480 -160390670 - MER7A DNA MER2_type 0 346 1 21 36 0 0 chr5 39239745 39239773 -160390377 + AT_rich Low_complexity Low_complexity 1 28 0 367 229 118 49 chr5 39239898 39240042 -160390108 - L2 LINE L2 -1 3312 3159 * 1187 253 164 35 chr5 39240022 39240564 -160389586 - L2 LINE L2 -992 2322 1711 2191 47 8 0 chr5 39240603 39240856 -160389294 + AluSc SINE Alu 1 255 -54 892 40 0 0 chr5 39240857 39240958 -160389192 + AluSc SINE Alu 155 255 -54 1103 84 14 0 chr5 39240959 39241177 -160388973 + AluSc SINE Alu 155 374 0 224 258 172 25 chr5 39241249 39241412 -160388738 - L2 LINE L2 -1805 1509 1323 8579 98 26 14 chr5 39241532 39242549 -160387601 + L1MA3 LINE L1 2133 3176 -4389 3460 31 2 2 chr5 39242549 39242968 -160387182 + L1PA4 LINE L1 5734 6152 -3 8579 98 26 14 chr5 39242968 39243425 -160386725 + L1MA3 LINE L1 3176 3626 -3939 * 9318 171 23 45 chr5 39243411 39245546 -160384604 + L1MA3 LINE L1 4709 6797 -768 583 161 124 0 chr5 39245559 39245696 -160384454 - L1 LINE L1 -1678 4468 4315 3460 90 108 12 chr5 39245697 39246385 -160383765 + L1MA3 LINE L1 6819 7613 -111 25 83 0 0 chr5 39246912 39246972 -160383178 + AT_rich Low_complexity Low_complexity 1 60 0 210 71 0 0 chr5 39247164 39247192 -160382958 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 314 286 68 61 chr5 39247219 39247239 -160382911 - L2 LINE L2 -209 3063 3045 2391 131 98 14 chr5 39247239 39247668 -160382482 + MLT1C LTR MaLR 1 465 -2 314 286 68 61 chr5 39247668 39247794 -160382356 - L2 LINE L2 -227 3045 2916 782 185 40 0 chr5 39247860 39248011 -160382139 + MER58B DNA MER1_type 185 341 0 642 227 77 31 chr5 39248026 39248220 -160381930 + MIR SINE MIR 60 262 0 206 335 144 46 chr5 39248304 39248498 -160381652 - L2 LINE L2 -400 2914 2702 393 282 0 0 chr5 39248825 39248928 -160381222 + MER94 DNA DNA 1 103 -31 484 300 111 62 chr5 39250591 39251058 -160379092 - L2 LINE L2 -887 2427 1938 1108 223 54 26 chr5 39251175 39251561 -160378589 + L1ME3 LINE L1 5765 6161 -1 7691 168 122 23 chr5 39251750 39253347 -160376803 + MER52A LTR ERV1 1 1755 0 329 312 33 107 chr5 39253402 39253739 -160376411 - L2 LINE L2 -1839 1475 1164 197 214 48 71 chr5 39253743 39253827 -160376323 - L2 LINE L2 -976 2338 2257 21 36 0 0 chr5 39255154 39255182 -160374968 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 39255318 39255340 -160374810 + AT_rich Low_complexity Low_complexity 1 22 0 2509 68 0 3 chr5 39255560 39255871 -160374279 - AluY SINE Alu -1 310 1 2158 122 0 3 chr5 39257252 39257555 -160372595 + AluSq SINE Alu 6 307 -6 539 302 44 28 chr5 39257790 39258038 -160372112 + L2 LINE L2 3061 3312 -1 729 140 9 0 chr5 39258257 39258371 -160371779 - AluJb SINE Alu -197 115 1 247 242 11 11 chr5 39258622 39258713 -160371437 + L1ME LINE L1 5766 5856 -265 1186 243 39 41 chr5 39259011 39259237 -160370913 - MLT1E2 LTR MaLR 0 626 400 1551 185 3 25 chr5 39259237 39259523 -160370627 - AluJo SINE Alu -32 280 1 1186 243 39 41 chr5 39259523 39259634 -160370516 - MLT1E2 LTR MaLR -226 400 290 519 105 19 57 chr5 39259647 39259752 -160370398 - L1MA9 LINE L1 -36 6276 6176 525 44 0 0 chr5 39259765 39259833 -160370317 + (TG)n Simple_repeat Simple_repeat 1 68 0 265 242 0 45 chr5 39259940 39260006 -160370144 - MLT1E2 LTR MaLR -563 63 1 234 91 0 0 chr5 39260202 39260235 -160369915 + (ATG)n Simple_repeat Simple_repeat 2 34 0 718 246 62 11 chr5 39261045 39261305 -160368845 + L1MCc LINE L1 31 303 -6120 586 307 50 29 chr5 39261389 39261630 -160368520 - MIR SINE MIR -3 259 14 585 222 167 0 chr5 39261973 39262135 -160368015 - L2 LINE L2 0 3313 3125 533 261 121 10 chr5 39262252 39262459 -160367691 - MLT1J LTR MaLR -77 434 205 2282 100 3 3 chr5 39262471 39262771 -160367379 + AluSp SINE Alu 1 300 -13 285 29 0 0 chr5 39266060 39266094 -160364056 + (TA)n Simple_repeat Simple_repeat 2 35 0 1598 261 37 29 chr5 39266788 39267376 -160362774 - L2 LINE L2 -3 3310 2639 1689 143 24 44 chr5 39267394 39267687 -160362463 - AluJo SINE Alu -25 287 1 231 228 18 18 chr5 39267705 39267762 -160362388 - L2 LINE L2 -750 2564 2508 209 171 0 0 chr5 39267932 39267967 -160362183 + (TTGG)n Simple_repeat Simple_repeat 3 37 0 593 104 31 0 chr5 39267967 39268063 -160362087 + U6 snRNA snRNA 2 100 -7 644 253 103 15 chr5 39268173 39268378 -160361772 + MIR SINE MIR 16 236 -26 199 319 124 44 chr5 39269634 39269747 -160360403 - MER5A DNA MER1_type -11 178 57 546 201 158 22 chr5 39269786 39269970 -160360180 + MER112 DNA MER1_type 34 242 -18 383 210 180 10 chr5 39270042 39270142 -160360008 - L2 LINE L2 0 3313 3197 342 232 72 0 chr5 39271575 39271644 -160358506 + MIR SINE MIR 20 93 -169 260 207 52 0 chr5 39271875 39271933 -160358217 - L2 LINE L2 -4 3309 3249 256 283 0 0 chr5 39271975 39272035 -160358115 - L2 LINE L2 -262 3051 2992 932 272 42 0 chr5 39272412 39272695 -160357455 + LTR16C LTR ERVL 191 485 -6 505 296 65 15 chr5 39272855 39273054 -160357096 - MIR SINE MIR -26 236 28 283 331 73 68 chr5 39273190 39273438 -160356712 + L2 LINE L2 3022 3270 -2 475 322 106 49 chr5 39273839 39274103 -160356047 + L2 LINE L2 2994 3272 0 225 268 14 42 chr5 39274579 39274650 -160355500 + L2 LINE L2 3184 3252 -20 1140 247 149 18 chr5 39274904 39275523 -160354627 + L2 LINE L2 2630 3313 0 2392 78 31 65 chr5 39275587 39275973 -160354177 - THE1C LTR MaLR -2 373 1 404 276 49 0 chr5 39276964 39277087 -160353063 + MIR SINE MIR 22 150 -112 954 207 80 4 chr5 39277652 39277903 -160352247 - L1MA9 LINE L1 -38 6274 6005 350 276 238 9 chr5 39277939 39278149 -160352001 - MIR SINE MIR 0 262 5 254 345 136 22 chr5 39280130 39280453 -160349697 + L2 LINE L2 2004 2394 -920 2074 121 10 7 chr5 39280453 39280759 -160349391 - AluSg SINE Alu -3 307 1 254 345 136 22 chr5 39280759 39280884 -160349266 + L2 LINE L2 2394 2503 -811 292 221 35 70 chr5 39281439 39281525 -160348625 - L2 LINE L2 0 3272 3190 2331 110 0 0 chr5 39282004 39282304 -160347846 + AluSq SINE Alu 1 300 -13 666 264 64 24 chr5 39282489 39282739 -160347411 - MIR SINE MIR 0 262 3 282 272 65 0 chr5 39282933 39283025 -160347125 - MIR SINE MIR -49 213 116 287 266 117 0 chr5 39284688 39284782 -160345368 - MIR SINE MIR -111 151 47 526 260 102 10 chr5 39284910 39285106 -160345044 + MER20 DNA MER1_type 2 215 -4 356 277 101 13 chr5 39286073 39286270 -160343880 - L1ME LINE L1 -370 5751 5533 967 252 27 0 chr5 39286713 39286935 -160343215 + MIR SINE MIR 33 260 -2 182 296 37 37 chr5 39287021 39287102 -160343048 + MIR3 SINE MIR 104 184 -24 1492 266 177 19 chr5 39287365 39288273 -160341877 - L2 LINE L2 -6 3307 2258 280 221 13 13 chr5 39288398 39288475 -160341675 - L1ME4a LINE L1 -81 6040 5964 34 24 0 0 chr5 39289276 39289317 -160340833 + AT_rich Low_complexity Low_complexity 1 41 0 292 288 0 0 chr5 39289702 39289782 -160340368 - L1M4 LINE L1 -1998 4148 4069 310 279 12 47 chr5 39290670 39290756 -160339394 - MIR SINE MIR -85 123 41 203 311 48 29 chr5 39293503 39293606 -160336544 - L2 LINE L2 -558 2756 2652 2523 57 0 3 chr5 39296115 39296415 -160333735 - AluY SINE Alu -12 299 1 21 57 0 0 chr5 39296508 39296543 -160333607 + AT_rich Low_complexity Low_complexity 1 35 0 27764 49 9 1 chr5 39297112 39301613 -160328537 - L1PA5 LINE L1 -2 6152 1621 377 271 85 25 chr5 39301835 39301953 -160328197 - L2 LINE L2 -1 3312 3188 2231 96 13 7 chr5 39302288 39302590 -160327560 - AluSg SINE Alu -6 304 1 826 199 70 11 chr5 39304424 39304610 -160325540 - MER20 DNA MER1_type -17 202 6 572 239 208 23 chr5 39304619 39305095 -160325055 + L1MC5 LINE L1 7332 7895 -66 20270 76 7 0 chr5 39305435 39308250 -160321900 + L1P LINE L1 11 2844 -3302 457 196 116 87 chr5 39308380 39308553 -160321597 - MLT1F LTR MaLR -364 178 1 1159 191 17 9 chr5 39308674 39308905 -160321245 + MLT1F1 LTR MaLR 333 565 -2 281 254 141 7 chr5 39309402 39309544 -160320606 - L2 LINE L2 -2 3311 3151 325 242 84 11 chr5 39310379 39310474 -160319676 - L2 LINE L2 -423 2891 2790 390 196 43 33 chr5 39310477 39310569 -160319581 + MER81 DNA DNA 1 93 -21 5184 66 0 0 chr5 39311363 39312013 -160318137 + L1PA6 LINE L1 5494 6143 -11 22 35 0 0 chr5 39312013 39312042 -160318108 + AT_rich Low_complexity Low_complexity 1 29 0 257 322 178 41 chr5 39312123 39312517 -160317633 - L2 LINE L2 -723 2591 2144 6071 127 41 13 chr5 39313106 39314323 -160315827 - L1MA4A LINE L1 -13 6290 5045 232 237 140 0 chr5 39314318 39314411 -160315739 - HAL1 LINE L1 -1194 1313 1208 * 22 56 0 0 chr5 39315982 39316018 -160314132 + AT_rich Low_complexity Low_complexity 1 36 0 1618 229 66 92 chr5 39317059 39318202 -160311948 - L1ME3A LINE L1 -5 6165 5050 835 87 0 0 chr5 39319905 39320009 -160310141 + AluSx SINE Alu 1 104 -209 1607 87 0 0 chr5 39320035 39320243 -160309907 - MER11B LTR ERVK -1023 213 6 1411 109 5 5 chr5 39320243 39320444 -160309706 + AluSx SINE Alu 93 293 -17 251 200 200 0 chr5 39320460 39320530 -160309620 - MER103 DNA DNA -71 95 12 1606 228 102 54 chr5 39321671 39322188 -160307962 + MLT1F LTR MaLR 1 542 0 2284 89 7 0 chr5 39323066 39323357 -160306793 - AluSq SINE Alu -20 293 1 737 262 94 12 chr5 39323473 39323717 -160306433 + MLT1J2 LTR MaLR 55 318 -132 1146 147 5 5 chr5 39323816 39324000 -160306150 - MER2 DNA MER2_type -155 190 7 308 302 176 11 chr5 39324364 39324546 -160305604 + L2 LINE L2 2534 2745 -569 305 262 233 0 chr5 39324891 39324994 -160305156 + L2 LINE L2 3182 3308 -5 207 0 0 0 chr5 39326337 39326360 -160303790 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 358 361 119 23 chr5 39327034 39327607 -160302543 + L2 LINE L2 2002 2629 -685 25 0 0 0 chr5 39328030 39328055 -160302095 + AT_rich Low_complexity Low_complexity 1 25 0 604 239 40 40 chr5 39329027 39329203 -160300947 - L2 LINE L2 -974 2340 2165 1675 183 3 23 chr5 39329873 39330174 -160299976 + AluJb SINE Alu 2 296 -16 650 241 0 0 chr5 39330232 39330365 -160299785 + FLAM_A SINE Alu 1 133 0 1004 50 0 36 chr5 39330830 39330969 -160299181 + AluY SINE Alu 178 311 0 29 28 0 0 chr5 39331114 39331150 -160299000 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 39331596 39331618 -160298532 + AT_rich Low_complexity Low_complexity 1 22 0 275 210 258 16 chr5 39332874 39332998 -160297152 + MER20 DNA MER1_type 66 219 0 1502 198 42 15 chr5 39334372 39334772 -160295378 - L1M4 LINE L1 -841 5305 4895 1595 225 11 14 chr5 39334773 39335128 -160295022 + MLT1A1 LTR MaLR 1 354 -11 3585 194 20 59 chr5 39335128 39336110 -160294040 - L1M4 LINE L1 -1249 4897 3954 293 336 0 0 chr5 39336131 39336277 -160293873 - L1MEc LINE L1 -4844 1552 1407 974 257 73 38 chr5 39336287 39336820 -160293330 - L1MEc LINE L1 -5062 1334 783 3152 83 2 0 chr5 39336836 39337256 -160292894 - L1PA10 LINE L1 -2 6166 5746 2061 114 59 0 chr5 39337258 39337564 -160292586 + L1P4 LINE L1 5332 5655 -513 2434 261 67 13 chr5 39337566 39337622 -160292528 - L1MEc LINE L1 -5602 794 743 2684 105 5 0 chr5 39337622 39337995 -160292155 - THE1C LTR MaLR 0 375 1 2434 261 67 13 chr5 39337995 39338650 -160291500 - L1MEc LINE L1 -5653 743 44 392 161 0 11 chr5 39338704 39338791 -160291359 + GA-rich Low_complexity Low_complexity 4 89 0 21 0 0 0 chr5 39338891 39338912 -160291238 + AT_rich Low_complexity Low_complexity 1 21 0 254 273 20 10 chr5 39339082 39339181 -160290969 + L1MCa LINE L1 1470 1569 -4857 294 231 192 0 chr5 39339266 39339344 -160290806 + L2 LINE L2 3180 3272 0 392 322 46 35 chr5 39339672 39339846 -160290304 - MER5B DNA MER1_type -2 176 1 1334 199 125 20 chr5 39340493 39340894 -160289256 - Zaphod DNA AcHobo 0 4031 3589 536 156 325 28 chr5 39340862 39341188 -160288962 - Zaphod DNA AcHobo -3022 1009 587 * 985 257 113 19 chr5 39341198 39341509 -160288641 - Zaphod DNA AcHobo -3691 340 1 294 70 0 127 chr5 39342358 39342429 -160287721 - L1MA2 LINE L1 0 6305 6244 592 155 15 110 chr5 39343771 39343867 -160286283 - Charlie5 DNA MER1_type 0 2624 2555 2187 96 10 7 chr5 39343867 39344159 -160285991 + AluSx SINE Alu 1 293 -19 592 155 15 110 chr5 39344159 39344262 -160285888 - Charlie5 DNA MER1_type -69 2555 2444 2358 34 41 10 chr5 39344770 39345063 -160285087 + AluY SINE Alu 1 302 -9 770 247 6 17 chr5 39345689 39345867 -160284283 + MER5B DNA MER1_type 3 178 0 4111 76 0 6 chr5 39345971 39346499 -160283651 + LTR17 LTR ERV1 256 780 0 16946 43 3 1 chr5 39346528 39348539 -160281611 + HERV17 LTR ERV1 1952 3965 -4661 10440 39 0 0 chr5 39348538 39349760 -160280390 + HERV17 LTR ERV1 4798 6019 -2607 * 272 95 0 0 chr5 39349753 39349795 -160280355 + HERV17 LTR ERV1 7510 7551 -1075 * 2333 59 7 0 chr5 39349782 39350072 -160280078 + HERV17 LTR ERV1 8335 8626 0 2728 34 9 0 chr5 39350072 39350394 -160279756 + LTR17 LTR ERV1 1 325 -455 387 0 0 0 chr5 39352018 39352061 -160278089 + (CA)n Simple_repeat Simple_repeat 2 44 0 492 48 0 0 chr5 39352078 39352141 -160278009 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 466 261 67 42 chr5 39352227 39352392 -160277758 - MIR SINE MIR -66 196 28 227 222 0 14 chr5 39352695 39352767 -160277383 + CT-rich Low_complexity Low_complexity 2 72 0 229 324 36 9 chr5 39353638 39353749 -160276401 + L1ME LINE L1 12 125 -5945 22 0 0 0 chr5 39354049 39354071 -160276079 + AT_rich Low_complexity Low_complexity 1 22 0 10701 165 62 39 chr5 39354126 39356899 -160273251 + L1MA2 LINE L1 15 3189 -4376 6721 17 0 0 chr5 39356916 39357688 -160272462 - L1PA2 LINE L1 0 6155 5384 3332 24 0 0 chr5 39357686 39358098 -160272052 + L1PA2 LINE L1 4979 5390 -756 * 6401 173 22 5 chr5 39358096 39359872 -160270278 + L1MA2 LINE L1 3174 4982 -2583 722 123 0 18 chr5 39359872 39359986 -160270164 - MER75 DNA T2_type 0 504 393 3064 94 14 48 chr5 39359986 39360487 -160269663 - L1M1 LINE L1 -4622 2943 2460 2468 141 32 2 chr5 39360487 39360892 -160269258 - MER75 DNA T2_type -97 417 1 9881 133 17 14 chr5 39360892 39363622 -160266528 + L1MA2 LINE L1 4979 7721 -2 1512 268 83 52 chr5 39363775 39365697 -160264453 + L1MEc LINE L1 1042 2980 -3235 492 261 37 78 chr5 39365852 39366070 -160264080 - MIR SINE MIR -23 239 31 338 359 19 0 chr5 39366055 39366161 -160263989 + L2 LINE L2 3138 3245 -27 * 545 261 135 80 chr5 39366167 39366604 -160263546 - MLT1L LTR MaLR -10 605 145 227 302 0 121 chr5 39367004 39367120 -160263030 + L2 LINE L2 2952 3053 -219 468 0 0 0 chr5 39367525 39367577 -160262573 + (CA)n Simple_repeat Simple_repeat 2 53 0 1329 231 100 39 chr5 39367752 39368210 -160261940 - MLT1D LTR MaLR 0 505 20 1070 235 167 46 chr5 39368286 39368831 -160261319 - MLT1L LTR MaLR 0 615 5 1158 152 71 9 chr5 39369068 39369292 -160260858 + AluJb SINE Alu 21 258 -54 252 298 51 51 chr5 39369503 39369661 -160260489 + MLT1J2 LTR MaLR 272 429 -21 315 0 0 0 chr5 39371189 39371224 -160258926 + (TG)n Simple_repeat Simple_repeat 1 35 0 1644 210 17 14 chr5 39371408 39371756 -160258394 + MLT1A1 LTR MaLR 17 365 0 591 272 5 11 chr5 39372219 39372403 -160257747 - L1MC5 LINE L1 -44 7917 7735 218 173 0 19 chr5 39372454 39372506 -160257644 + GA-rich Low_complexity Low_complexity 1 51 0 308 305 92 30 chr5 39374988 39375119 -160255031 + MER5A DNA MER1_type 46 184 -5 180 280 40 0 chr5 39375306 39375356 -160254794 - MIR SINE MIR -73 135 84 1081 203 56 65 chr5 39375545 39375973 -160254177 + L1MC5 LINE L1 7490 7913 -48 1110 266 29 44 chr5 39379067 39379548 -160250602 - L1ME4a LINE L1 -81 6040 5567 342 87 0 0 chr5 39379679 39379725 -160250425 - MLT2A1 LTR ERVL 0 453 408 279 0 0 0 chr5 39379725 39379756 -160250394 + (CA)n Simple_repeat Simple_repeat 2 32 0 213 196 0 0 chr5 39379755 39379801 -160250349 + (TA)n Simple_repeat Simple_repeat 2 47 0 * 2770 93 42 3 chr5 39379807 39380192 -160249958 - MLT2A1 LTR ERVL -44 400 1 2233 112 0 3 chr5 39380764 39381067 -160249083 - AluSg SINE Alu -2 308 7 258 305 42 59 chr5 39381184 39381302 -160248848 - L2 LINE L2 0 3272 3157 257 139 0 0 chr5 39381596 39381632 -160248518 - MLT2D LTR ERVL -5 510 472 276 30 0 0 chr5 39381632 39381665 -160248485 + (TG)n Simple_repeat Simple_repeat 2 34 0 2130 146 29 29 chr5 39381668 39382052 -160248098 + Tigger2a DNA MER2_type 1 384 -50 1513 210 82 8 chr5 39382062 39382428 -160247722 - MLT2D LTR ERVL -20 394 2 290 262 0 24 chr5 39382435 39382519 -160247631 - MIR SINE MIR -108 154 73 1687 258 82 48 chr5 39382693 39383279 -160246871 - MER21B LTR ERV1 -132 731 126 1663 183 11 57 chr5 39383366 39383519 -160246631 + L1MB2 LINE L1 5445 5604 -579 2671 89 13 5 chr5 39383519 39383891 -160246259 - THE1C LTR MaLR 0 375 1 1663 183 11 57 chr5 39383891 39384103 -160246047 + L1MB2 LINE L1 5604 5793 -390 336 133 27 13 chr5 39384111 39384186 -160245964 + (TA)n Simple_repeat Simple_repeat 1 76 0 302 242 11 63 chr5 39384189 39384284 -160245866 + L1MC4 LINE L1 6614 6703 -1339 257 82 16 49 chr5 39384284 39384345 -160245805 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 526 128 20 0 chr5 39384345 39384437 -160245713 + L1MB2 LINE L1 5782 5878 -305 20515 34 1 1 chr5 39384437 39387693 -160242457 + L1PA3 LINE L1 2899 6155 0 198 136 0 0 chr5 39387717 39387761 -160242389 + (A)n Simple_repeat Simple_repeat 1 44 0 1416 159 60 3 chr5 39387761 39388044 -160242106 + L1MB2 LINE L1 5871 6169 -2 2419 63 0 44 chr5 39388048 39388363 -160241787 + AluSc SINE Alu 1 301 -8 407 228 50 67 chr5 39388499 39388573 -160241577 + L1ME2 LINE L1 3194 3268 -2878 2029 140 20 0 chr5 39388573 39388865 -160241285 + AluSx SINE Alu 1 298 -14 407 228 50 67 chr5 39388865 39388970 -160241180 + L1ME2 LINE L1 3268 3370 -2776 4055 222 90 11 chr5 39388973 39391066 -160239084 + L1ME2 LINE L1 3906 6162 -2 194 262 24 107 chr5 39391123 39391207 -160238943 - MIR SINE MIR -66 142 66 431 220 94 63 chr5 39391637 39391796 -160238354 - L2 LINE L2 0 3313 3150 1791 110 41 21 chr5 39391805 39392095 -160238055 + MER1B DNA MER1_type 37 332 -7 621 256 69 5 chr5 39392117 39392320 -160237830 - L2 LINE L2 -171 3142 2927 744 173 20 89 chr5 39392411 39392613 -160237537 - MER5A DNA MER1_type -1 188 1 286 314 32 19 chr5 39392613 39392769 -160237381 - L2 LINE L2 -405 2909 2752 258 333 94 0 chr5 39393715 39393811 -160236339 + L3 LINE CR1 1468 1572 -5 328 281 34 11 chr5 39393935 39394024 -160236126 - MIR SINE MIR -11 251 161 1066 78 0 0 chr5 39394973 39395101 -160235049 + AluSp/q SINE Alu 168 295 -18 333 0 0 0 chr5 39395515 39395552 -160234598 + (TG)n Simple_repeat Simple_repeat 2 38 0 1794 116 0 0 chr5 39395735 39395967 -160234183 + AluSx SINE Alu 2 233 -79 304 339 25 0 chr5 39397609 39397727 -160232423 + MIR SINE MIR 21 141 -67 721 297 50 0 chr5 39397779 39397998 -160232152 - MIR SINE MIR -15 247 18 466 196 59 20 chr5 39400666 39400768 -160229382 - MER5A DNA MER1_type -80 109 4 2211 118 27 30 chr5 39400964 39401329 -160228821 + THE1B LTR MaLR 1 364 0 378 0 0 0 chr5 39401609 39401651 -160228499 + (CA)n Simple_repeat Simple_repeat 1 42 0 225 0 0 0 chr5 39401668 39401693 -160228457 + (GA)n Simple_repeat Simple_repeat 2 26 0 629 165 288 0 chr5 39402588 39402758 -160227392 - MER44D DNA MER2_type -89 520 32 492 250 64 64 chr5 39403135 39403355 -160226795 - HAL1 LINE L1 0 2507 2288 * 527 230 34 69 chr5 39403343 39403547 -160226603 - HAL1 LINE L1 -2289 218 22 353 298 53 15 chr5 39403673 39403804 -160226346 + MIR SINE MIR 3 138 -124 753 309 55 51 chr5 39404241 39404886 -160225264 + L2 LINE L2 2588 3247 -66 1871 146 103 11 chr5 39404886 39405255 -160224895 - MER57A LTR ERV1 0 403 1 753 309 55 51 chr5 39405255 39405323 -160224827 + L2 LINE L2 3247 3313 0 21 0 0 0 chr5 39405355 39405376 -160224774 + AT_rich Low_complexity Low_complexity 1 21 0 345 240 27 0 chr5 39405613 39405688 -160224462 + L2 LINE L2 3196 3272 0 2048 124 10 22 chr5 39406150 39406464 -160223686 + AluSq SINE Alu 1 310 -3 246 306 122 27 chr5 39406679 39406826 -160223324 + MER117 DNA MER1_type 1 161 -36 21 0 0 0 chr5 39406872 39406893 -160223257 + AT_rich Low_complexity Low_complexity 1 21 0 522 274 38 65 chr5 39406901 39407087 -160223063 - MIR SINE MIR -70 192 12 22 35 0 0 chr5 39407264 39407293 -160222857 + AT_rich Low_complexity Low_complexity 1 29 0 1511 201 0 26 chr5 39408295 39408599 -160221551 + AluJo SINE Alu 2 297 -15 336 311 22 22 chr5 39408713 39408848 -160221302 + MER5A DNA MER1_type 55 189 0 557 89 0 0 chr5 39408974 39409053 -160221097 + MADE1 DNA Mariner 2 80 0 401 256 12 61 chr5 39409895 39410059 -160220091 + L1ME4a LINE L1 5965 6120 -1 1964 132 14 10 chr5 39410081 39410377 -160219773 + AluSg SINE Alu 1 297 -13 2337 97 0 6 chr5 39411553 39411864 -160218286 - AluSc SINE Alu 0 309 1 2025 137 3 3 chr5 39412034 39412333 -160217817 + AluSx SINE Alu 1 299 -13 2436 74 0 13 chr5 39413090 39413400 -160216750 - AluSq SINE Alu -7 306 1 26 0 0 0 chr5 39413537 39413563 -160216587 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr5 39413906 39413934 -160216216 + AT_rich Low_complexity Low_complexity 1 28 0 1285 179 160 0 chr5 39415264 39415527 -160214623 + AluJb SINE Alu 1 305 -7 31 0 0 0 chr5 39415726 39415757 -160214393 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 39415810 39415838 -160214312 + AT_rich Low_complexity Low_complexity 1 28 0 181 309 0 0 chr5 39416459 39416501 -160213649 + L3 LINE CR1 1524 1565 -12 595 211 105 11 chr5 39416792 39416971 -160213179 + MIR SINE MIR 63 258 -4 22 70 0 0 chr5 39418373 39418416 -160211734 + AT_rich Low_complexity Low_complexity 1 43 0 2175 88 0 27 chr5 39418710 39419007 -160211143 - AluY SINE Alu -10 301 13 1991 138 3 3 chr5 39419490 39419786 -160210364 - AluSx SINE Alu -12 300 5 541 206 206 7 chr5 39420132 39420273 -160209877 + MER5B DNA MER1_type 8 176 -2 317 271 139 16 chr5 39420568 39420690 -160209460 + MIR SINE MIR 29 165 -97 22 70 0 0 chr5 39421115 39421158 -160208992 + AT_rich Low_complexity Low_complexity 1 43 0 25 31 0 0 chr5 39421482 39421514 -160208636 + AT_rich Low_complexity Low_complexity 1 32 0 38 61 0 0 chr5 39421688 39421754 -160208396 + AT_rich Low_complexity Low_complexity 1 66 0 272 259 35 35 chr5 39422840 39422925 -160207225 + MER5A DNA MER1_type 84 168 -21 593 294 44 18 chr5 39423780 39424008 -160206142 + MIR SINE MIR 29 262 0 616 262 107 39 chr5 39424629 39425014 -160205136 - L1ME4a LINE L1 -2 6119 5709 302 279 0 13 chr5 39426532 39426611 -160203539 + MIR SINE MIR 81 158 -104 334 306 72 27 chr5 39426814 39426925 -160203225 + MIR SINE MIR 34 149 -59 29 47 0 0 chr5 39428809 39428852 -160201298 + AT_rich Low_complexity Low_complexity 1 43 0 26 50 0 0 chr5 39429348 39429388 -160200762 + AT_rich Low_complexity Low_complexity 1 40 0 195 328 75 0 chr5 39430006 39430073 -160200077 + L2 LINE L2 3242 3313 0 360 315 92 0 chr5 39430196 39430380 -160199770 + MARNA DNA Mariner 48 248 -338 374 248 55 9 chr5 39430465 39430574 -160199576 + MARNA DNA Mariner 408 521 -65 28 29 0 0 chr5 39430616 39430651 -160199499 + AT_rich Low_complexity Low_complexity 1 35 0 212 293 0 28 chr5 39430873 39430979 -160199171 + GA-rich Low_complexity Low_complexity 2 104 0 2193 104 0 16 chr5 39431181 39431488 -160198662 - AluSx SINE Alu -8 304 3 24 32 0 0 chr5 39432042 39432073 -160198077 + AT_rich Low_complexity Low_complexity 1 31 0 1855 119 3 127 chr5 39432246 39432631 -160197519 - MER1B DNA MER1_type 0 337 1 1298 174 4 64 chr5 39432949 39433058 -160197092 + AluJb SINE Alu 38 152 -160 2238 82 7 7 chr5 39433058 39433352 -160196798 + AluSg1 SINE Alu 1 294 -15 1298 174 4 64 chr5 39433352 39433523 -160196627 + AluJb SINE Alu 152 301 -11 299 300 60 1 chr5 39433621 39433771 -160196379 - L1ME4a LINE L1 -670 5492 5336 2251 92 0 7 chr5 39433774 39434066 -160196084 + AluSc SINE Alu 3 292 -17 418 324 188 16 chr5 39434180 39434547 -160195603 + L2 LINE L2 2818 3247 -25 430 313 168 11 chr5 39434689 39434868 -160195282 - MIR SINE MIR -8 254 48 464 321 105 54 chr5 39434880 39435487 -160194663 - L2 LINE L2 -1112 2202 1565 487 257 50 14 chr5 39436052 39436192 -160193958 - MIR3 SINE MIR 0 208 64 344 296 161 60 chr5 39437125 39437708 -160192442 - L1M2 LINE L1 -5489 1360 758 214 322 0 0 chr5 39439300 39439359 -160190791 + MIR3 SINE MIR 135 193 -15 314 347 111 0 chr5 39441004 39441148 -160189002 + L2 LINE L2 2608 2767 -547 247 321 43 50 chr5 39441146 39441286 -160188864 - MER5A DNA MER1_type -30 159 21 * 663 72 72 0 chr5 39441579 39441764 -160188386 + AluSc SINE Alu 166 359 0 2548 258 136 12 chr5 39441767 39442688 -160187462 - L2 LINE L2 -1668 1646 612 2895 201 96 14 chr5 39442732 39442773 -160187377 - L1MC4 LINE L1 0 8042 8006 1800 90 9 128 chr5 39442773 39443116 -160187034 + AluSq SINE Alu 2 303 0 2895 201 96 14 chr5 39443116 39443807 -160186343 - L1MC4 LINE L1 -36 8006 7250 1564 160 0 22 chr5 39444255 39444523 -160185627 - AluJb SINE Alu -4 308 47 2293 100 3 0 chr5 39444791 39445092 -160185058 + AluSg SINE Alu 1 302 -8 397 226 208 13 chr5 39445859 39446018 -160184132 - L1MD3 LINE L1 -19 7976 7787 180 0 0 0 chr5 39446029 39446049 -160184101 + (TG)n Simple_repeat Simple_repeat 2 21 0 387 252 26 35 chr5 39446049 39446164 -160183986 - L1MD2 LINE L1 -254 6105 5992 21 57 0 0 chr5 39447540 39447575 -160182575 + AT_rich Low_complexity Low_complexity 1 35 0 1939 176 85 22 chr5 39448277 39448738 -160181412 - LTR2B LTR ERV1 0 490 1 194 204 0 19 chr5 39449693 39449747 -160180403 + CT-rich Low_complexity Low_complexity 2 54 0 368 326 174 6 chr5 39449818 39449996 -160180154 + MIR SINE MIR 48 255 -7 382 331 156 29 chr5 39451179 39451641 -160178509 + L3 LINE CR1 977 1555 -22 249 233 50 0 chr5 39452043 39452103 -160178047 + L2 LINE L2 3251 3313 0 705 306 130 9 chr5 39452310 39452633 -160177517 + L3 LINE CR1 1201 1562 -15 244 321 99 23 chr5 39453576 39453707 -160176443 - L2 LINE L2 -2 3311 3171 2389 252 34 27 chr5 39453837 39454592 -160175558 + L1MC2 LINE L1 806 1566 -4887 381 367 120 8 chr5 39454736 39454970 -160175180 - L2 LINE L2 -230 3042 2836 1995 128 54 7 chr5 39454970 39455268 -160174882 + AluSx SINE Alu 1 312 0 381 367 120 8 chr5 39455268 39455511 -160174639 - L2 LINE L2 -436 2836 2511 348 200 31 0 chr5 39455925 39455990 -160174160 + MER3 DNA MER1_type 40 106 -103 * 601 76 93 8 chr5 39455985 39456103 -160174047 + MER3 DNA MER1_type 2430 2557 0 182 194 0 0 chr5 39457067 39457098 -160173052 - MIR SINE MIR -29 233 203 560 216 9 9 chr5 39457146 39457257 -160172893 - MIR SINE MIR -147 115 5 342 230 79 40 chr5 39458914 39459040 -160171110 - MER94 DNA DNA -3 131 1 41 0 0 0 chr5 39459066 39459107 -160171043 + AT_rich Low_complexity Low_complexity 1 41 0 239 254 17 164 chr5 39459377 39459554 -160170596 + MIR SINE MIR 72 222 -40 24 32 0 0 chr5 39462408 39462439 -160167711 + AT_rich Low_complexity Low_complexity 1 31 0 309 98 98 0 chr5 39463381 39463442 -160166708 + L1MA6 LINE L1 6229 6295 -5 22 0 0 0 chr5 39463443 39463465 -160166685 + AT_rich Low_complexity Low_complexity 1 22 0 332 237 0 59 chr5 39463499 39463634 -160166516 + L1MC2 LINE L1 3928 4054 -2887 4703 174 93 30 chr5 39463710 39465793 -160164357 + L1MC2 LINE L1 4923 7123 -16 1712 165 3 21 chr5 39465794 39466085 -160164065 + AluJo SINE Alu 1 286 -26 2116 113 10 0 chr5 39466282 39466575 -160163575 - AluSq SINE Alu -17 296 1 455 290 62 0 chr5 39469037 39469182 -160160968 - LTR50 LTR ERVL -166 629 476 2139 154 77 15 chr5 39469300 39469525 -160160625 - MSTA LTR MaLR 0 428 218 2841 126 0 87 chr5 39469525 39470087 -160160063 + MER75 DNA T2_type 1 513 -1 2139 154 77 15 chr5 39470087 39470264 -160159886 - MSTA LTR MaLR -210 218 1 382 269 35 14 chr5 39470483 39470628 -160159522 + MLT1J2 LTR MaLR 5 152 -298 241 268 41 0 chr5 39470635 39470732 -160159418 + L1ME3A LINE L1 5261 5361 -998 1784 168 17 13 chr5 39470765 39471063 -160159087 - AluJo SINE Alu -8 304 6 21 0 0 0 chr5 39471128 39471149 -160159001 + AT_rich Low_complexity Low_complexity 1 21 0 958 197 17 21 chr5 39471150 39471409 -160158741 - LTR56 LTR ERV1 -5 433 201 1231 189 104 76 chr5 39471478 39471944 -160158206 + MER66A LTR ERV1 97 478 0 1179 113 20 10 chr5 39471944 39472146 -160158004 - LTR56 LTR ERV1 -241 204 1 949 232 91 117 chr5 39472147 39472841 -160157309 + L1ME3A LINE L1 5494 6169 -1 357 330 47 14 chr5 39472876 39473088 -160157062 + L1MEc LINE L1 1938 2156 -4240 359 342 8 0 chr5 39473218 39473335 -160156815 + L1ME3A LINE L1 6039 6156 -14 1907 145 3 3 chr5 39473345 39473652 -160156498 - AluSx SINE Alu 0 307 1 426 244 65 107 chr5 39473679 39474130 -160156020 + L1M4 LINE L1 3840 4276 -1870 224 273 33 98 chr5 39474143 39474326 -160155824 + MIR SINE MIR 73 243 -19 409 259 159 7 chr5 39474344 39474584 -160155566 + L2 LINE L2 2979 3313 0 2680 121 15 6 chr5 39475065 39475756 -160154394 - L1P4 LINE L1 -489 5672 4978 * 13322 148 20 30 chr5 39475740 39478968 -160151182 - L1PA12 LINE L1 -3364 4220 1011 2003 281 118 39 chr5 39478975 39480050 -160150100 - L1M3c LINE L1 -4763 1378 219 381 188 0 0 chr5 39480141 39480226 -160149924 + (TG)n Simple_repeat Simple_repeat 2 86 0 1460 233 103 53 chr5 39480300 39482004 -160148146 + L1ME LINE L1 3965 5766 -396 1078 268 52 63 chr5 39482425 39483024 -160147126 + L1P4 LINE L1 1405 2077 -4772 596 215 170 45 chr5 39483024 39483271 -160146879 + MER52A LTR ERV1 1 278 -1477 10595 209 25 47 chr5 39483273 39484802 -160145348 + L1P4 LINE L1 2684 4245 -2624 1655 196 0 0 chr5 39484802 39485077 -160145073 + AluJb SINE Alu 1 275 -37 10595 209 25 47 chr5 39485077 39485984 -160144166 + L1P4 LINE L1 4245 5170 -1699 538 122 0 11 chr5 39485984 39486074 -160144076 + L1MA1 LINE L1 6214 6302 0 10595 209 25 47 chr5 39486074 39486100 -160144050 + L1P4 LINE L1 5170 5195 -1674 2091 79 72 0 chr5 39486100 39486379 -160143771 + AluSq SINE Alu 1 299 -14 10595 209 25 47 chr5 39486379 39487609 -160142541 + L1P4 LINE L1 5195 6285 -584 1283 268 67 28 chr5 39487911 39488634 -160141516 + L1PA12 LINE L1 2179 2866 -4708 2595 145 40 17 chr5 39488657 39489303 -160140847 + L1P4 LINE L1 5083 5734 -432 303 273 38 30 chr5 39489294 39489426 -160140724 + L1MC4 LINE L1 6638 6770 -1272 * 186 195 0 73 chr5 39489437 39489478 -160140672 + L2 LINE L2 3180 3217 -96 183 269 30 45 chr5 39490746 39490813 -160139337 - L2 LINE L2 -821 2493 2428 2248 107 0 16 chr5 39490952 39491262 -160138888 - AluSx SINE Alu -7 305 1 409 214 11 0 chr5 39491993 39492082 -160138068 - MER70A LTR ERVL -3 469 380 287 302 65 51 chr5 39492200 39492554 -160137596 + L1M4 LINE L1 2185 2543 -3603 315 223 79 116 chr5 39492573 39492778 -160137372 - L1MC5 LINE L1 -48 7913 7702 806 70 0 9 chr5 39492778 39492893 -160137257 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 1758 167 7 0 chr5 39492896 39493172 -160136978 - AluSg SINE Alu -32 278 1 315 223 79 116 chr5 39493172 39493254 -160136896 - L1MC5 LINE L1 -261 7700 7633 194 256 73 0 chr5 39493349 39493431 -160136719 + L2 LINE L2 3096 3183 -130 2265 108 0 3 chr5 39493474 39493771 -160136379 + AluSx SINE Alu 1 296 -16 524 15 15 0 chr5 39493914 39493979 -160136171 + (TC)n Simple_repeat Simple_repeat 1 66 0 237 333 44 54 chr5 39495923 39496127 -160134023 - MIR3 SINE MIR -2 206 5 1779 168 4 0 chr5 39497861 39498141 -160132009 + AluJb SINE Alu 5 285 -27 2265 115 0 3 chr5 39498739 39499035 -160131115 - AluSx SINE Alu -17 295 1 7622 23 0 1 chr5 39499072 39500557 -160129593 + L1PA3 LINE L1 4676 6159 0 653 169 64 47 chr5 39500566 39500614 -160129536 - L1MB4 LINE L1 -2 6178 6132 1867 133 0 58 chr5 39500614 39500922 -160129228 - AluSx SINE Alu -22 290 1 653 169 64 47 chr5 39500922 39501045 -160129105 - L1MB4 LINE L1 -48 6132 6004 3346 86 31 4 chr5 39501045 39501532 -160128618 - LTR3b LTR ERVK 0 500 1 443 100 0 14 chr5 39501546 39501616 -160128534 - HERVK14 LTR ERVK -61 5884 5816 2324 160 1 35 chr5 39501628 39502159 -160127991 - HERVK14 LTR ERVK -373 5572 5141 532 198 95 8 chr5 39502166 39502292 -160127858 - HERVK3 LTR ERVK -5790 1453 1317 434 267 0 0 chr5 39502277 39502378 -160127772 - HERVK3 LTR ERVK -6563 680 580 * 183 80 0 0 chr5 39502415 39502440 -160127710 + (A)n Simple_repeat Simple_repeat 1 25 0 429 210 134 105 chr5 39502442 39502680 -160127470 - HERVK3 LTR ERVK -6971 272 28 3458 100 6 4 chr5 39502914 39503413 -160126737 - LTR3b LTR ERVK 0 500 1 1595 170 58 0 chr5 39503413 39503742 -160126408 - L1MB4 LINE L1 -173 6010 5663 1820 173 3 17 chr5 39503955 39504256 -160125894 + AluJb SINE Alu 1 297 -15 189 0 0 0 chr5 39504256 39504277 -160125873 + (GA)n Simple_repeat Simple_repeat 2 22 0 512 261 18 58 chr5 39504709 39504935 -160125215 + MLT1D-int LTR MaLR 66 282 -1089 494 174 24 169 chr5 39504937 39505144 -160125006 + MLT1D-int LTR MaLR 484 660 -711 2601 186 22 7 chr5 39505210 39505673 -160124477 - MER70A LTR ERVL -2 470 1 281 306 0 0 chr5 39505673 39505758 -160124392 + MLT1D-int LTR MaLR 666 750 -621 238 88 0 0 chr5 39505758 39505792 -160124358 + Alu SINE Alu 1 34 -265 2176 115 6 13 chr5 39506263 39506576 -160123574 + AluSx SINE Alu 1 311 -1 842 133 0 0 chr5 39506651 39506771 -160123379 - AluSp/q SINE Alu -19 294 175 226 217 72 14 chr5 39506778 39506847 -160123303 + MLT1D-int LTR MaLR 813 885 -486 948 209 32 124 chr5 39507001 39507403 -160122747 + MLT1D-int LTR MaLR 963 1327 -44 2205 184 40 38 chr5 39507450 39507641 -160122509 + MLT1D LTR MaLR 1 190 -315 1691 76 31 5 chr5 39507641 39507865 -160122285 - MER30 DNA MER1_type 0 230 1 2205 184 40 38 chr5 39507865 39508177 -160121973 + MLT1D LTR MaLR 190 505 0 1197 208 0 15 chr5 39508177 39508442 -160121708 - HERVL74 LTR ERVL -1047 2509 2249 1399 238 50 1 chr5 39508549 39508940 -160121210 - HERVL74 LTR ERVL -1478 2096 1675 778 224 49 106 chr5 39508960 39509367 -160120783 - LTR52 LTR ERVL -37 384 1 300 246 34 51 chr5 39509376 39509494 -160120656 + HAL1 LINE L1 2392 2507 0 499 186 12 0 chr5 39509609 39509695 -160120455 + FRAM SINE Alu 73 159 -17 390 74 0 0 chr5 39510048 39510102 -160120048 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 186 364 17 25 chr5 39510604 39510722 -160119428 + L2 LINE L2 2967 3083 -189 2290 85 7 0 chr5 39510940 39511234 -160118916 - AluSq SINE Alu -17 296 1 301 101 7 94 chr5 39511630 39511768 -160118382 + (TAAAAA)n Simple_repeat Simple_repeat 4 129 0 478 277 32 26 chr5 39513028 39513183 -160116967 + MER96 DNA MER1_type? 20 175 0 266 325 26 0 chr5 39513415 39513529 -160116621 - MER5B DNA MER1_type -56 122 6 1958 155 53 35 chr5 39514435 39514809 -160115341 - MER4A LTR ERV1 0 664 284 685 96 19 10 chr5 39514802 39514906 -160115244 - MER4A LTR ERV1 -557 107 3 * 15036 163 33 15 chr5 39515007 39516185 -160113965 - L1MA3 LINE L1 -106 7618 6463 1994 76 43 29 chr5 39516185 39516462 -160113688 - AluSq SINE Alu -2 311 31 15036 163 33 15 chr5 39516462 39519630 -160110520 - L1MA3 LINE L1 -1261 6463 3199 7064 201 93 4 chr5 39519631 39521510 -160108640 - L1MA3 LINE L1 -5163 2402 14 692 168 80 0 chr5 39524560 39524685 -160105465 - FLAM_A SINE Alu -3 139 5 370 294 28 9 chr5 39524740 39524849 -160105301 + L2 LINE L2 3198 3308 -5 209 253 76 38 chr5 39526933 39527012 -160103138 - L2 LINE L2 -821 2493 2412 2158 92 3 38 chr5 39527427 39527743 -160102407 - AluSp SINE Alu -6 307 3 2162 184 29 15 chr5 39528186 39528598 -160101552 - MER70A LTR ERVL 0 472 55 5536 164 32 39 chr5 39528598 39529066 -160101084 - MER70A-int LTR ERVL -141 4882 4412 1143 44 0 0 chr5 39529066 39529202 -160100948 + L1PA4 LINE L1 6020 6155 0 5536 164 32 39 chr5 39529202 39529655 -160100495 - MER70A-int LTR ERVL -611 4412 3957 2281 119 3 0 chr5 39529655 39529966 -160100184 + AluSx SINE Alu 1 312 0 5536 164 32 39 chr5 39529966 39530168 -160099982 - MER70A-int LTR ERVL -1066 3957 3755 2116 174 88 8 chr5 39530168 39530564 -160099586 - MSTA LTR MaLR 0 428 1 5536 164 32 39 chr5 39530564 39531296 -160098854 - MER70A-int LTR ERVL -1268 3755 2947 2067 174 38 33 chr5 39531285 39531704 -160098446 - MER70A-int LTR ERVL -2216 2807 2387 * 2954 187 48 5 chr5 39531725 39532798 -160097352 - MER70A-int LTR ERVL -3832 1191 1 2689 159 28 30 chr5 39532798 39533271 -160096879 - MER70A LTR ERVL 0 472 1 2105 43 0 0 chr5 39534060 39534294 -160095856 + L1PA5 LINE L1 5908 6141 -13 183 129 0 0 chr5 39534349 39534380 -160095770 + (TTCTG)n Simple_repeat Simple_repeat 4 34 0 1911 222 44 44 chr5 39534702 39535242 -160094908 + L1MC4a LINE L1 5304 5843 -1965 509 171 36 0 chr5 39535298 39535409 -160094741 + L1MC4a LINE L1 5955 6069 -1739 1067 225 132 65 chr5 39535415 39535580 -160094570 + L1MC4a LINE L1 6110 6263 -1545 492 59 35 0 chr5 39535580 39535665 -160094485 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 1067 225 132 65 chr5 39535665 39535726 -160094424 + L1MC4a LINE L1 6263 6318 -1490 1270 222 11 0 chr5 39535726 39535992 -160094158 - L1MB3 LINE L1 0 6183 5915 1067 225 132 65 chr5 39535992 39536271 -160093879 + L1MC4a LINE L1 6318 6650 -1158 438 219 6 94 chr5 39536261 39536421 -160093729 + L1MC4 LINE L1 6871 7016 -1026 * 5292 96 52 4 chr5 39536418 39537244 -160092906 - L1PBa LINE L1 -4231 2632 1767 615 240 56 15 chr5 39537363 39537559 -160092591 - L1MC5 LINE L1 -34 7927 7724 478 325 52 5 chr5 39538139 39538333 -160091817 - MIR SINE MIR -40 222 20 257 294 118 33 chr5 39539051 39539204 -160090946 - MIR SINE MIR -44 218 53 1158 278 108 10 chr5 39539364 39539770 -160090380 - MLT1J2 LTR MaLR 0 450 5 384 291 252 4 chr5 39540629 39540863 -160089287 - L1MC4a LINE L1 -1850 5958 5667 800 242 181 47 chr5 39590872 39591298 -160038852 - L2 LINE L2 -1121 2193 1711 1822 115 0 21 chr5 39591392 39591671 -160038479 + AluSg SINE Alu 38 310 0 300 398 54 0 chr5 39591693 39591914 -160038236 - L2 LINE L2 -571 2743 2511 348 200 31 0 chr5 39592335 39592400 -160037750 + MER3 DNA MER1_type 40 106 -103 * 601 76 93 8 chr5 39592395 39592513 -160037637 + MER3 DNA MER1_type 2469 2596 0 182 194 0 0 chr5 39593476 39593507 -160036643 - MIR SINE MIR -29 233 203 560 216 9 9 chr5 39593555 39593666 -160036484 - MIR SINE MIR -147 115 5 239 254 17 164 chr5 39594283 39594460 -160035690 + MIR SINE MIR 72 222 -40 24 32 0 0 chr5 39597165 39597196 -160032954 + AT_rich Low_complexity Low_complexity 1 31 0 314 98 98 0 chr5 39598138 39598199 -160031951 + L1MA6 LINE L1 6229 6295 -5 22 0 0 0 chr5 39598200 39598222 -160031928 + AT_rich Low_complexity Low_complexity 1 22 0 339 231 8 60 chr5 39598256 39598390 -160031760 + L1MC2 LINE L1 3133 3259 -2887 4886 175 93 30 chr5 39598466 39600522 -160029628 + L1MC2 LINE L1 4128 6301 -43 324 172 0 45 chr5 39600522 39600594 -160029556 + Alu SINE Alu 1 46 -256 2095 113 10 0 chr5 39600858 39601151 -160028999 - AluSq SINE Alu -17 296 1 200 309 15 0 chr5 39602504 39602572 -160027578 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 503 335 45 0 chr5 39603556 39603756 -160026394 - LTR50 LTR ERVL -111 684 476 1135 142 80 50 chr5 39603874 39604113 -160026037 - MSTA LTR MaLR 0 428 183 2606 127 0 93 chr5 39604113 39604619 -160025531 + MER75 DNA T2_type 1 459 -55 989 167 58 0 chr5 39604726 39604900 -160025250 - MSTA LTR MaLR -244 184 1 430 269 35 14 chr5 39605119 39605264 -160024886 + MLT1J2 LTR MaLR 5 152 -298 261 268 41 0 chr5 39605271 39605368 -160024782 + L1ME3A LINE L1 5261 5361 -998 1753 168 17 13 chr5 39605401 39605699 -160024451 - AluJo SINE Alu -8 304 6 834 164 13 66 chr5 39605789 39606057 -160024093 - LTR56 LTR ERV1 -5 432 201 1324 189 104 76 chr5 39606126 39606592 -160023558 + MER66A LTR ERV1 97 478 0 1233 109 25 10 chr5 39606592 39606793 -160023357 - LTR56 LTR ERV1 -241 204 1 1085 224 94 118 chr5 39606794 39607487 -160022663 + L1ME3A LINE L1 5494 6169 -1 370 325 47 14 chr5 39607522 39607734 -160022416 + L1MEc LINE L1 1938 2156 -4240 228 342 8 0 chr5 39607864 39607981 -160022169 + L1ME3A LINE L1 6039 6156 -14 1937 145 3 0 chr5 39607991 39608297 -160021853 - AluSx SINE Alu 0 307 1 555 252 54 99 chr5 39608324 39608749 -160021401 + L1M4 LINE L1 3840 4245 -1901 207 279 33 98 chr5 39608786 39608969 -160021181 + MIR SINE MIR 73 243 -19 411 259 159 7 chr5 39608987 39609227 -160020923 + L2 LINE L2 2979 3313 0 2816 121 15 6 chr5 39609708 39610399 -160019751 - L1P4 LINE L1 -489 5672 4978 * 13195 174 22 30 chr5 39610383 39613605 -160016545 - L1PA12 LINE L1 -3364 4220 1011 522 201 79 32 chr5 39613612 39613801 -160016349 - L1M3c LINE L1 -4763 1378 1181 2300 256 35 25 chr5 39613901 39614616 -160015534 - L1MCc LINE L1 -4896 1527 806 244 321 99 23 chr5 39614746 39614877 -160015273 + L2 LINE L2 3171 3311 -2 705 306 130 9 chr5 39615821 39616144 -160014006 - L3 LINE CR1 -15 1562 1201 249 233 50 0 chr5 39616351 39616411 -160013739 - L2 LINE L2 0 3313 3251 382 331 156 29 chr5 39616813 39617275 -160012875 - L3 LINE CR1 -22 1555 977 368 326 174 6 chr5 39618463 39618641 -160011509 - MIR SINE MIR -7 255 48 194 204 0 19 chr5 39618712 39618766 -160011384 + GA-rich Low_complexity Low_complexity 2 54 0 1939 176 85 22 chr5 39619706 39620167 -160009983 + LTR2B LTR ERV1 1 490 0 21 57 0 0 chr5 39620869 39620904 -160009246 + AT_rich Low_complexity Low_complexity 1 35 0 2293 100 3 0 chr5 39622531 39622832 -160007318 - AluSg SINE Alu -8 302 1 1564 160 0 22 chr5 39623100 39623368 -160006782 + AluJb SINE Alu 47 308 -4 2895 201 96 14 chr5 39623816 39624507 -160005643 + L1MC4 LINE L1 7250 8006 -36 1800 90 9 128 chr5 39624507 39624850 -160005300 - AluSq SINE Alu 0 303 2 2895 201 96 14 chr5 39624850 39624891 -160005259 + L1MC4 LINE L1 8006 8042 0 2521 259 137 11 chr5 39624935 39625854 -160004296 + L2 LINE L2 612 1646 -1668 1094 84 14 0 chr5 39625857 39626060 -160004090 - AluSc SINE Alu 0 359 155 901 40 0 0 chr5 39626061 39626162 -160003988 - AluSc SINE Alu -54 255 155 229 69 0 0 chr5 39626163 39626192 -160003958 - Alu SINE Alu -44 255 227 217 303 13 53 chr5 39626292 39626368 -160003782 + L2 LINE L2 2250 2322 -992 * 372 229 118 49 chr5 39626348 39626492 -160003658 + L2 LINE L2 3159 3312 -1 21 36 0 0 chr5 39626617 39626645 -160003505 + AT_rich Low_complexity Low_complexity 1 28 0 1748 148 86 12 chr5 39626910 39627234 -160002916 + MER7A DNA MER2_type 1 346 0 36 70 0 0 chr5 39628191 39628262 -160001888 + AT_rich Low_complexity Low_complexity 1 71 0 257 159 0 0 chr5 39628629 39628673 -160001477 + MIR SINE MIR 71 114 -148 41 72 0 0 chr5 39628908 39628991 -160001159 + AT_rich Low_complexity Low_complexity 1 83 0 934 152 0 0 chr5 39630001 39630139 -160000011 + AluJb SINE Alu 4 141 -171 240 35 0 0 chr5 39630156 39630185 -159999965 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 227 211 92 13 chr5 39630616 39630692 -159999458 + L1M4 LINE L1 5209 5290 -856 185 351 54 60 chr5 39631076 39631244 -159998906 - L2 LINE L2 -250 3022 2856 750 130 35 0 chr5 39632532 39632647 -159997503 + L1MA3 LINE L1 16 134 -7431 * 14605 154 44 16 chr5 39632645 39633667 -159996483 + L1MA3 LINE L1 1105 2097 -5468 1764 147 14 24 chr5 39633667 39633959 -159996191 + AluJb SINE Alu 1 289 -23 14605 154 44 16 chr5 39633959 39634932 -159995218 + L1MA3 LINE L1 2097 3183 -4382 3454 31 2 2 chr5 39634932 39635351 -159994799 + L1PA4 LINE L1 5734 6152 -3 14605 154 44 16 chr5 39635351 39635808 -159994342 + L1MA3 LINE L1 3183 3626 -3939 9831 166 45 56 chr5 39635794 39638729 -159991421 + L1MA3 LINE L1 4709 7613 -111 * 25 83 0 0 chr5 39639256 39639316 -159990834 + AT_rich Low_complexity Low_complexity 1 60 0 210 71 0 0 chr5 39639508 39639536 -159990614 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 315 286 68 61 chr5 39639563 39639583 -159990567 - L2 LINE L2 -209 3063 3045 2362 133 98 16 chr5 39639583 39640013 -159990137 + MLT1C LTR MaLR 1 465 -2 315 286 68 61 chr5 39640013 39640139 -159990011 - L2 LINE L2 -227 3045 2916 834 196 52 5 chr5 39640161 39640356 -159989794 + MER58B DNA MER1_type 16 341 0 649 227 77 31 chr5 39640371 39640565 -159989585 + MIR SINE MIR 60 262 0 209 335 144 46 chr5 39640649 39640843 -159989307 - L2 LINE L2 -400 2914 2702 421 282 0 0 chr5 39641170 39641273 -159988877 + MER94 DNA DNA 1 103 -31 465 300 111 62 chr5 39642970 39643437 -159986713 - L2 LINE L2 -887 2427 1938 1215 223 54 26 chr5 39643554 39643940 -159986210 + L1ME3 LINE L1 5765 6161 -1 7578 205 114 42 chr5 39644129 39645766 -159984384 + MER52A LTR ERV1 1 1755 0 328 312 33 107 chr5 39645821 39646158 -159983992 - L2 LINE L2 -1839 1475 1164 197 214 48 71 chr5 39646162 39646246 -159983904 - L2 LINE L2 -976 2338 2257 21 36 0 0 chr5 39647573 39647601 -159982549 + AT_rich Low_complexity Low_complexity 1 28 0 2138 122 0 3 chr5 39648349 39648652 -159981498 + AluSq SINE Alu 6 307 -6 547 302 44 28 chr5 39648887 39649135 -159981015 + L2 LINE L2 3061 3312 -1 716 140 9 0 chr5 39649354 39649468 -159980682 - AluJb SINE Alu -197 115 1 267 242 11 11 chr5 39649719 39649810 -159980340 + L1ME LINE L1 5766 5856 -265 1290 243 39 41 chr5 39650108 39650334 -159979816 - MLT1E2 LTR MaLR 0 626 400 1540 185 3 25 chr5 39650334 39650620 -159979530 - AluJo SINE Alu -32 280 1 1290 243 39 41 chr5 39650620 39650731 -159979419 - MLT1E2 LTR MaLR -226 400 290 549 105 19 57 chr5 39650744 39650849 -159979301 - L1MA9 LINE L1 -36 6276 6176 525 44 0 0 chr5 39650862 39650930 -159979220 + (TG)n Simple_repeat Simple_repeat 1 68 0 287 242 0 45 chr5 39651037 39651103 -159979047 - MLT1E2 LTR MaLR -563 63 1 234 91 0 0 chr5 39651299 39651332 -159978818 + (ATG)n Simple_repeat Simple_repeat 2 34 0 793 252 60 11 chr5 39652136 39652402 -159977748 + L1MCc LINE L1 25 303 -6120 589 307 50 29 chr5 39652486 39652727 -159977423 - MIR SINE MIR -3 259 14 584 222 167 0 chr5 39653070 39653232 -159976918 - L2 LINE L2 0 3313 3125 604 261 121 10 chr5 39653349 39653556 -159976594 - MLT1J LTR MaLR -77 434 205 2263 100 3 3 chr5 39653568 39653868 -159976282 + AluSp SINE Alu 1 300 -13 285 29 0 0 chr5 39657156 39657190 -159972960 + (TA)n Simple_repeat Simple_repeat 2 35 0 1576 261 37 29 chr5 39657884 39658472 -159971678 - L2 LINE L2 -3 3310 2639 1674 143 24 44 chr5 39658490 39658783 -159971367 - AluJo SINE Alu -25 287 1 256 232 18 0 chr5 39658801 39658857 -159971293 - L2 LINE L2 -750 2564 2508 209 171 0 0 chr5 39659027 39659062 -159971088 + (TTGG)n Simple_repeat Simple_repeat 3 37 0 628 104 31 0 chr5 39659062 39659158 -159970992 + U6 snRNA snRNA 2 100 -7 616 258 103 15 chr5 39659268 39659473 -159970677 + MIR SINE MIR 16 236 -26 196 319 124 44 chr5 39660729 39660842 -159969308 - MER5A DNA MER1_type -11 178 57 596 201 158 22 chr5 39660881 39661065 -159969085 + MER112 DNA MER1_type 34 242 -18 381 210 180 10 chr5 39661137 39661237 -159968913 - L2 LINE L2 0 3313 3197 339 232 72 0 chr5 39662670 39662739 -159967411 + MIR SINE MIR 20 93 -169 261 207 52 0 chr5 39662970 39663028 -159967122 - L2 LINE L2 -4 3309 3249 252 283 0 0 chr5 39663070 39663130 -159967020 - L2 LINE L2 -262 3051 2992 1025 272 42 0 chr5 39663507 39663790 -159966360 + LTR16C LTR ERVL 191 485 -6 503 296 65 15 chr5 39663950 39664149 -159966001 - MIR SINE MIR -26 236 28 272 331 73 68 chr5 39664285 39664533 -159965617 + L2 LINE L2 3022 3270 -2 466 322 106 49 chr5 39664934 39665198 -159964952 + L2 LINE L2 2994 3272 0 221 268 14 42 chr5 39665674 39665745 -159964405 + L2 LINE L2 3184 3252 -20 1126 247 149 18 chr5 39665999 39666618 -159963532 + L2 LINE L2 2630 3313 0 2376 78 31 65 chr5 39666682 39667068 -159963082 - THE1C LTR MaLR -2 373 1 391 276 49 0 chr5 39668059 39668182 -159961968 + MIR SINE MIR 22 150 -112 1029 207 80 4 chr5 39668748 39668999 -159961151 - L1MA9 LINE L1 -38 6274 6005 347 276 238 9 chr5 39669035 39669245 -159960905 - MIR SINE MIR 0 262 5 196 347 136 22 chr5 39671233 39671556 -159958594 + L2 LINE L2 2004 2394 -920 2034 122 10 7 chr5 39671556 39671860 -159958290 - AluSg SINE Alu -5 305 1 196 347 136 22 chr5 39671860 39671985 -159958165 + L2 LINE L2 2394 2503 -811 290 221 35 70 chr5 39672540 39672626 -159957524 - L2 LINE L2 0 3272 3190 2304 110 0 0 chr5 39673105 39673405 -159956745 + AluSq SINE Alu 1 300 -13 685 264 64 24 chr5 39673591 39673841 -159956309 - MIR SINE MIR 0 262 3 274 283 65 0 chr5 39674035 39674127 -159956023 - MIR SINE MIR -49 213 116 284 266 117 0 chr5 39675789 39675883 -159954267 - MIR SINE MIR -111 151 47 525 286 92 0 chr5 39676011 39676207 -159953943 + MER20 DNA MER1_type 2 215 -4 369 277 75 11 chr5 39677159 39677359 -159952791 - L1MC/D LINE L1 -463 5658 5533 963 252 27 0 chr5 39677802 39678024 -159952126 + MIR SINE MIR 33 260 -2 180 296 37 37 chr5 39678110 39678191 -159951959 + MIR3 SINE MIR 104 184 -24 1441 267 178 19 chr5 39678455 39679362 -159950788 - L2 LINE L2 -6 3307 2258 306 221 13 13 chr5 39679487 39679564 -159950586 - L1ME4a LINE L1 -81 6040 5964 34 24 0 0 chr5 39680365 39680406 -159949744 + AT_rich Low_complexity Low_complexity 1 41 0 315 288 0 0 chr5 39680791 39680871 -159949279 - L1M4 LINE L1 -1998 4148 4069 307 279 12 47 chr5 39681759 39681845 -159948305 - MIR SINE MIR -85 123 41 211 301 48 29 chr5 39684594 39684697 -159945453 - L2 LINE L2 -558 2756 2652 21 36 0 0 chr5 39686923 39686951 -159943199 + AT_rich Low_complexity Low_complexity 1 28 0 2517 57 0 3 chr5 39687208 39687508 -159942642 - AluY SINE Alu -12 299 1 21 57 0 0 chr5 39687601 39687636 -159942514 + AT_rich Low_complexity Low_complexity 1 35 0 3611 40 0 7 chr5 39688205 39688651 -159941499 - L1PA5 LINE L1 -4 6150 5708 39875 62 9 8 chr5 39688751 39694468 -159935682 - L1PA5 LINE L1 -432 5722 2 735 234 208 21 chr5 39694793 39695268 -159934882 - L1MC5 LINE L1 -66 7895 7332 889 199 70 11 chr5 39695277 39695463 -159934687 + MER20 DNA MER1_type 6 202 -17 2207 96 13 7 chr5 39697299 39697601 -159932549 + AluSg SINE Alu 1 304 -6 378 271 85 25 chr5 39697936 39698054 -159932096 + L2 LINE L2 3188 3312 -1 22 56 0 0 chr5 39698647 39698683 -159931467 + AT_rich Low_complexity Low_complexity 1 36 0 1996 227 73 73 chr5 39699722 39700545 -159929605 - L1ME3A LINE L1 -5 6165 5343 2017 37 0 0 chr5 39700863 39701105 -159929045 + L1PA4 LINE L1 5911 6152 -3 296 287 155 16 chr5 39701542 39701671 -159928479 - MIR3 SINE MIR -43 165 19 25 31 0 0 chr5 39702205 39702237 -159927913 + AT_rich Low_complexity Low_complexity 1 32 0 2895 171 32 10 chr5 39702397 39702895 -159927255 + Tigger7 DNA MER2_type 17 525 -208 544 126 46 0 chr5 39702889 39702976 -159927174 + Tigger7 DNA MER2_type 2396 2486 -1 * 419 287 170 12 chr5 39703200 39703447 -159926703 + L1MC/D LINE L1 5494 5779 -2029 22 0 0 0 chr5 39703568 39703590 -159926560 + AT_rich Low_complexity Low_complexity 1 22 0 1017 278 108 10 chr5 39704470 39704876 -159925274 + MLT1J2 LTR MaLR 5 450 0 281 312 110 32 chr5 39705035 39705189 -159924961 + MIR SINE MIR 53 218 -44 511 335 61 4 chr5 39705908 39706138 -159924012 + MIR SINE MIR 20 262 0 212 347 222 18 chr5 39706160 39706327 -159923823 - MIR3 SINE MIR -5 203 3 574 240 56 15 chr5 39706682 39706878 -159923272 + L1MC5 LINE L1 7724 7927 -34 200 240 60 0 chr5 39706987 39707037 -159923113 - L2 LINE L2 -2 3311 3259 5184 66 0 0 chr5 39707571 39708221 -159921929 + L1PA6 LINE L1 5494 6143 -11 22 35 0 0 chr5 39708221 39708250 -159921900 + AT_rich Low_complexity Low_complexity 1 29 0 257 322 178 41 chr5 39708331 39708725 -159921425 - L2 LINE L2 -723 2591 2144 610 322 78 17 chr5 39710752 39710982 -159919168 + MIR SINE MIR 8 251 -11 961 241 28 31 chr5 39712391 39712677 -159917473 + L1MC4 LINE L1 7413 7593 -368 524 236 7 57 chr5 39712798 39712938 -159917212 + FLAM_A SINE Alu 1 133 0 835 87 0 0 chr5 39712954 39713058 -159917092 + AluSx SINE Alu 1 104 -209 1607 87 0 0 chr5 39713084 39713292 -159916858 - MER11B LTR ERVK -1023 213 6 1360 104 5 15 chr5 39713292 39713494 -159916656 + AluSx SINE Alu 95 294 -18 244 203 203 0 chr5 39713510 39713579 -159916571 - MER103 DNA DNA -72 94 12 1606 228 102 54 chr5 39714721 39715238 -159914912 + MLT1F LTR MaLR 1 542 0 2251 89 7 0 chr5 39716116 39716407 -159913743 - AluSq SINE Alu -20 293 1 730 262 94 12 chr5 39716522 39716766 -159913384 + MLT1J2 LTR MaLR 55 318 -132 1160 164 5 0 chr5 39716865 39717054 -159913096 - MER2 DNA MER2_type -155 190 1 244 269 181 27 chr5 39717075 39717224 -159912926 - HAL1 LINE L1 -1037 1470 1299 6111 128 41 13 chr5 39717236 39718455 -159911695 - L1MA4A LINE L1 -11 6292 5045 241 237 140 0 chr5 39718450 39718543 -159911607 - HAL1 LINE L1 -1194 1313 1208 * 256 186 23 58 chr5 39720440 39720526 -159909624 - Tigger6b DNA MER2_type -761 836 754 1979 144 0 3 chr5 39721148 39721454 -159908696 - AluJb SINE Alu -7 305 1 259 291 146 0 chr5 39722052 39722155 -159907995 + MIR3 SINE MIR 54 171 -37 1714 198 57 37 chr5 39722751 39723155 -159906995 - MLT1F LTR MaLR -130 412 1 1117 190 17 13 chr5 39723276 39723508 -159906642 + MLT1F1 LTR MaLR 333 565 -2 292 254 141 7 chr5 39724005 39724147 -159906003 - L2 LINE L2 -2 3311 3151 418 249 24 115 chr5 39724994 39725027 -159905123 - L2 LINE L2 -494 2820 2786 596 191 9 17 chr5 39725027 39725142 -159905008 + MER81 DNA DNA 1 114 0 418 249 24 115 chr5 39725142 39725317 -159904833 - L2 LINE L2 -528 2786 2631 1986 120 4 0 chr5 39726273 39726548 -159903602 + AluSx SINE Alu 34 309 -3 301 202 258 16 chr5 39727873 39727997 -159902153 - MER20 DNA MER1_type 0 219 66 22 0 0 0 chr5 39729252 39729274 -159900876 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr5 39729720 39729756 -159900394 + AT_rich Low_complexity Low_complexity 1 36 0 994 50 0 36 chr5 39729901 39730040 -159900110 - AluY SINE Alu 0 311 178 607 256 0 0 chr5 39730503 39730636 -159899514 - FLAM_A SINE Alu 0 133 1 1664 183 3 20 chr5 39730694 39730995 -159899155 - AluJb SINE Alu -16 296 1 773 271 133 75 chr5 39731664 39732213 -159897937 + L2 LINE L2 2165 2745 -569 304 262 233 0 chr5 39732557 39732660 -159897490 + L2 LINE L2 3182 3308 -5 2071 120 3 31 chr5 39834073 39834390 -159795760 + AluSq SINE Alu 1 308 -5 449 264 7 0 chr5 39834678 39834826 -159795324 + (TG)n Simple_repeat Simple_repeat 2 150 0 300 324 28 35 chr5 39836184 39836329 -159793821 + MIR SINE MIR 70 213 -49 236 261 14 0 chr5 39836522 39836591 -159793559 + HAL1 LINE L1 1 70 -2437 2063 114 49 3 chr5 39836618 39836968 -159793182 + L1MA2 LINE L1 5939 6304 0 23 0 0 0 chr5 39836968 39836991 -159793159 + AT_rich Low_complexity Low_complexity 1 23 0 198 270 40 14 chr5 39837106 39837180 -159792970 + MER5B DNA MER1_type 103 178 0 204 297 90 27 chr5 39837219 39837330 -159792820 - MER5A DNA MER1_type 0 189 72 * 234 313 48 12 chr5 39837248 39837331 -159792819 + MER5A DNA MER1_type 44 129 -60 209 296 61 98 chr5 39837410 39837542 -159792608 - MER5A DNA MER1_type -26 163 37 375 278 186 27 chr5 39838809 39839147 -159791003 + HAL1 LINE L1 1 392 -2115 282 29 0 0 chr5 39839213 39839248 -159790902 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2069 94 7 4 chr5 39839248 39839524 -159790626 - AluSc SINE Alu -32 277 1 502 229 223 11 chr5 39840689 39840864 -159789286 + MIR SINE MIR 50 261 -1 434 286 40 16 chr5 39840975 39841101 -159789049 + L2 LINE L2 3140 3268 -4 621 241 64 75 chr5 39841911 39842193 -159787957 - LTR16C LTR ERVL -25 466 188 250 284 12 12 chr5 39842556 39842637 -159787513 - L3 LINE CR1 -308 1269 1189 1172 153 110 4 chr5 39842769 39842997 -159787153 + MLT1D LTR MaLR 248 499 -6 1215 232 30 57 chr5 39842997 39843522 -159786628 + L1M4 LINE L1 2276 2786 -3360 915 255 24 61 chr5 39843553 39844044 -159786106 + L1M4 LINE L1 2968 3440 -2706 763 190 3 129 chr5 39844039 39844350 -159785800 + L1ME1 LINE L1 5840 6111 -55 * 1646 154 44 7 chr5 39844350 39844828 -159785322 + L1MA5 LINE L1 5044 5534 -743 312 122 0 0 chr5 39844971 39845020 -159785130 - MADE1 DNA Mariner -30 50 2 4349 114 26 15 chr5 39845020 39845231 -159784919 + L1MA5 LINE L1 5568 5775 -525 2292 111 0 13 chr5 39845231 39845547 -159784603 + AluSx SINE Alu 1 312 0 4349 114 26 15 chr5 39845547 39846060 -159784090 + L1MA5 LINE L1 5775 6300 0 2225 84 0 4 chr5 39846232 39846506 -159783644 + AluSq SINE Alu 27 299 -14 231 235 24 47 chr5 39848303 39848388 -159781762 - LTR67 LTR ERVL 0 557 475 484 277 51 63 chr5 39848735 39849085 -159781065 + LTR16C LTR ERVL 146 491 0 181 299 119 0 chr5 39849200 39849267 -159780883 + L2 LINE L2 3198 3272 0 371 304 74 15 chr5 39849379 39849514 -159780636 + MIR SINE MIR 23 165 -97 210 200 0 55 chr5 39849561 39849616 -159780534 - MIR SINE MIR -98 164 113 822 181 6 30 chr5 39849839 39850005 -159780145 + MLT1A2 LTR MaLR 1 162 -212 2157 135 3 0 chr5 39850534 39850846 -159779304 + AluSq SINE Alu 1 313 0 365 274 88 36 chr5 39850962 39851181 -159778969 + L1MEc LINE L1 2185 2377 -3838 1037 201 59 70 chr5 39851275 39851663 -159778487 - L1MA8 LINE L1 -1 6290 5907 481 207 0 0 chr5 39851665 39851752 -159778398 + MER44D DNA MER2_type 1 357 -252 2149 138 10 50 chr5 39851754 39852256 -159777894 - L1MA8 LINE L1 -509 5791 5310 219 36 0 0 chr5 39852256 39852284 -159777866 + (TTG)n Simple_repeat Simple_repeat 1 28 0 936 78 0 0 chr5 39852387 39852503 -159777647 + AluSg/x SINE Alu 180 295 -14 6123 104 34 0 chr5 39852505 39853600 -159776550 - L1PA15 LINE L1 -16 6149 5040 1975 162 30 5 chr5 39853600 39854007 -159776143 - L1MA8 LINE L1 -1315 4831 4415 3153 228 17 11 chr5 39854031 39854965 -159775185 + L1MEc LINE L1 2509 3448 -2767 2067 115 12 18 chr5 39854972 39855326 -159774824 + L1PB3 LINE L1 5819 6170 0 982 89 62 42 chr5 39855326 39855576 -159774574 - Tigger3(Golem) DNA MER2_type -460 2568 2310 947 214 59 0 chr5 39855574 39855761 -159774389 - Tigger3(Golem) DNA MER2_type -2831 198 1 * 232 319 31 74 chr5 39855978 39856141 -159774009 - LTR16C LTR ERVL -263 228 73 2335 90 0 0 chr5 39856475 39856765 -159773385 + AluSc SINE Alu 1 290 -19 281 295 63 30 chr5 39856985 39857253 -159772897 + HAL1b LINE L1 75 351 -997 295 187 151 29 chr5 39857288 39857427 -159772723 + HAL1b LINE L1 333 488 -860 239 269 113 7 chr5 39857451 39857592 -159772558 + HAL1b LINE L1 531 686 -662 1820 217 39 31 chr5 39857677 39858346 -159771804 + L1ME1 LINE L1 2642 3315 -2900 910 186 0 68 chr5 39858376 39858624 -159771526 + AluJb SINE Alu 1 231 -81 3908 240 51 19 chr5 39858780 39860175 -159769975 + L1ME1 LINE L1 3469 4908 -1307 810 195 52 27 chr5 39860193 39860236 -159769914 + L1ME1 LINE L1 5234 5274 -957 2133 113 26 0 chr5 39860236 39860538 -159769612 + AluSx SINE Alu 3 312 0 810 195 52 27 chr5 39860538 39860814 -159769336 + L1ME1 LINE L1 5274 5554 -677 1329 106 6 6 chr5 39860816 39860996 -159769154 + AluSg/x SINE Alu 130 309 -3 1140 225 75 6 chr5 39861011 39861344 -159768806 + L1ME1 LINE L1 5578 5933 -302 996 85 0 0 chr5 39861567 39861697 -159768453 - AluSp/q SINE Alu -10 303 174 882 292 102 9 chr5 39861797 39862229 -159767921 - HAL1 LINE L1 -1809 698 227 244 247 0 41 chr5 39862304 39862377 -159767773 - HAL1 LINE L1 -2402 105 36 2379 166 23 13 chr5 39862383 39862854 -159767296 - L1MB8 LINE L1 -10 6168 5693 3064 127 7 38 chr5 39862854 39863402 -159766748 - L1PA15 LINE L1 -4 6161 5628 2501 151 33 27 chr5 39863585 39864313 -159765837 - L1PA15 LINE L1 -616 5549 4815 * 5197 174 6 29 chr5 39864311 39865441 -159764709 + L1P LINE L1 3748 4851 -1295 2250 112 23 3 chr5 39865475 39865780 -159764370 - AluSq SINE Alu -2 311 1 1728 266 31 48 chr5 39865895 39866659 -159763491 - L1MB8 LINE L1 -577 5601 4848 1628 136 3 28 chr5 39866668 39866955 -159763195 + L1MB1 LINE L1 5692 5971 -197 530 165 0 0 chr5 39867064 39867155 -159762995 + AluSg/x SINE Alu 212 302 -7 2040 122 7 3 chr5 39867315 39867610 -159762540 - AluSx SINE Alu -16 296 1 190 373 0 0 chr5 39867613 39867680 -159762470 - L2 LINE L2 -482 2832 2766 475 218 296 0 chr5 39867688 39867830 -159762320 - MER5A DNA MER1_type -2 187 4 355 98 0 0 chr5 39868568 39868619 -159761531 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 2234 89 3 0 chr5 39868607 39868901 -159761249 - AluSp SINE Alu -1 333 1 254 340 165 0 chr5 39869063 39869160 -159760990 - L2 LINE L2 -4 3268 3156 335 250 69 17 chr5 39869241 39869467 -159760683 + L1 LINE L1 5187 5425 -758 2286 104 0 0 chr5 39869539 39869836 -159760314 - AluSg SINE Alu -13 297 1 2240 96 3 7 chr5 39870387 39870689 -159759461 - AluSx SINE Alu -9 303 3 1618 174 76 0 chr5 39871008 39871283 -159758867 + AluJb SINE Alu 5 300 -12 2282 89 7 3 chr5 39871286 39871578 -159758572 + AluSc SINE Alu 2 294 -15 396 250 83 81 chr5 39871708 39872128 -159758022 + L1MC4 LINE L1 7622 8042 0 421 256 36 67 chr5 39872219 39872414 -159757736 - L1ME LINE L1 -440 5681 5493 2332 108 0 13 chr5 39872661 39872976 -159757174 - AluSx SINE Alu -1 311 1 683 277 71 31 chr5 39873237 39873713 -159756437 - L1ME LINE L1 -1295 4851 4357 2102 117 3 7 chr5 39873885 39874185 -159755965 + AluSx SINE Alu 1 299 -13 244 345 0 24 chr5 39875718 39875802 -159754348 - L2 LINE L2 -42 3230 3149 1093 283 120 18 chr5 39879501 39879942 -159750208 - LTR33 LTR ERVL 0 521 36 404 285 24 24 chr5 39880054 39880177 -159749973 + MER5C DNA MER1_type 6 128 -196 26 0 0 0 chr5 39880344 39880370 -159749780 + AT_rich Low_complexity Low_complexity 1 26 0 307 277 24 0 chr5 39880577 39880660 -159749490 + L1ME LINE L1 91 175 -5895 1820 134 0 0 chr5 39880675 39880921 -159749229 + AluSg SINE Alu 1 246 -64 844 126 0 31 chr5 39881103 39881230 -159748920 - AluJo SINE Alu -78 234 112 857 229 200 4 chr5 39881234 39881514 -159748636 + L1MC4a LINE L1 6633 6905 -903 1992 216 96 35 chr5 39881575 39882150 -159748000 + L1MC4 LINE L1 7325 7934 -108 289 172 109 141 chr5 39882205 39882286 -159747864 + L1MC4 LINE L1 7919 7996 -46 2421 101 0 0 chr5 39882286 39882594 -159747556 - AluSg SINE Alu 0 310 3 289 172 109 141 chr5 39882594 39882640 -159747510 + L1MC4 LINE L1 7996 8042 0 23 33 0 0 chr5 39882648 39882678 -159747472 + AT_rich Low_complexity Low_complexity 1 30 0 279 231 19 46 chr5 39882962 39883070 -159747080 + MER114 LTR ERV 544 648 0 28 29 0 0 chr5 39883072 39883107 -159747043 + AT_rich Low_complexity Low_complexity 1 35 0 872 290 73 66 chr5 39883160 39883305 -159746845 + MER114 LTR ERV 1 144 -504 2483 74 3 0 chr5 39883305 39883603 -159746547 - AluSp SINE Alu -14 299 1 872 290 73 66 chr5 39883603 39884102 -159746048 + MER114 LTR ERV 144 648 0 5712 96 4 4 chr5 39884205 39884983 -159745167 - L1PA8 LINE L1 0 6172 5395 234 203 17 0 chr5 39885950 39886009 -159744141 + T-rich Low_complexity Low_complexity 2 61 0 286 250 38 0 chr5 39886574 39886654 -159743496 + MIR SINE MIR 124 206 -56 460 309 65 52 chr5 39886860 39887151 -159742999 - L3 LINE CR1 -561 1016 722 2022 105 0 83 chr5 39887183 39887507 -159742643 + AluSq SINE Alu 1 297 -16 1779 83 133 8 chr5 39887509 39887773 -159742377 + AluSg1 SINE Alu 1 297 -12 251 303 144 46 chr5 39887801 39887996 -159742154 + MIR SINE MIR 48 261 -1 30 59 0 0 chr5 39888032 39888083 -159742067 + AT_rich Low_complexity Low_complexity 1 51 0 29 0 0 0 chr5 39888108 39888137 -159742013 + AT_rich Low_complexity Low_complexity 1 29 0 195 129 0 0 chr5 39888713 39888744 -159741406 + (TC)n Simple_repeat Simple_repeat 2 32 0 563 278 86 0 chr5 39890346 39890497 -159739653 - MIR3 SINE MIR -13 195 32 570 274 46 23 chr5 39890708 39890927 -159739223 + L1ME4a LINE L1 5605 5828 -293 793 236 46 0 chr5 39890964 39891159 -159738991 - MIR SINE MIR 0 262 59 275 299 47 28 chr5 39891928 39892035 -159738115 - L2 LINE L2 -1 3271 3163 976 255 84 47 chr5 39892061 39892504 -159737646 + MLT1G3 LTR MaLR 33 587 -8 307 326 77 45 chr5 39892606 39893008 -159737142 + L2 LINE L2 2347 2761 -553 802 306 61 4 chr5 39893752 39894013 -159736137 + MLT1J LTR MaLR 56 331 -180 2531 91 45 0 chr5 39894877 39895229 -159734921 - LTR8 LTR ERV1 0 691 324 439 253 97 13 chr5 39895258 39895412 -159734738 + L1MA10 LINE L1 6165 6331 -3 247 241 26 69 chr5 39895431 39895547 -159734603 + L1P LINE L1 4895 5005 -1141 204 156 0 22 chr5 39895557 39895569 -159734581 + A-rich Low_complexity Low_complexity 2 13 -32 796 204 0 0 chr5 39895569 39895701 -159734449 + FLAM_A SINE Alu 1 132 -1 204 156 0 22 chr5 39895701 39895733 -159734417 + A-rich Low_complexity Low_complexity 13 45 0 960 135 0 0 chr5 39895951 39896084 -159734066 + FLAM_C SINE Alu 1 133 0 330 26 0 0 chr5 39896085 39896124 -159734026 + (TA)n Simple_repeat Simple_repeat 1 39 0 682 235 238 3 chr5 39896868 39897208 -159732942 + L2 LINE L2 2036 2455 -859 940 274 162 27 chr5 39897394 39897955 -159732195 + L2 LINE L2 2150 2786 -528 595 212 22 7 chr5 39897971 39898108 -159732042 + L2 LINE L2 3162 3300 -13 2225 89 7 3 chr5 39898406 39898698 -159731452 + AluSp SINE Alu 1 293 -20 817 146 15 8 chr5 39898716 39898846 -159731304 + AluJo SINE Alu 7 137 -175 246 62 0 0 chr5 39900077 39900109 -159730041 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 2549 46 13 0 chr5 39900282 39900589 -159729561 - AluY SINE Alu 0 311 1 181 319 21 49 chr5 39900764 39900908 -159729242 + L2 LINE L2 2920 3059 -213 547 260 48 78 chr5 39901160 39901429 -159728721 + MIR SINE MIR 2 262 0 1444 164 33 52 chr5 39901599 39901701 -159728449 - MER33 DNA MER1_type -2261 324 222 1564 183 0 22 chr5 39901701 39901975 -159728175 - AluJb SINE Alu -44 268 1 1444 164 33 52 chr5 39901975 39902202 -159727948 - MER33 DNA MER1_type -2363 222 1 238 304 88 29 chr5 39902314 39902416 -159727734 + MIR SINE MIR 30 137 -71 2018 87 11 0 chr5 39902556 39902821 -159727329 - AluSg SINE Alu -11 299 32 974 112 0 28 chr5 39902861 39903024 -159727126 - AluSp SINE Alu 0 303 145 191 327 53 44 chr5 39904955 39905068 -159725082 - L2 LINE L2 -18 3295 3182 239 354 0 49 chr5 39905320 39905464 -159724686 + MIR SINE MIR 80 216 -46 196 293 73 0 chr5 39906276 39906358 -159723792 - L2 LINE L2 -32 3240 3153 180 239 87 0 chr5 39906485 39906531 -159723619 + L2 LINE L2 3223 3272 0 209 250 21 0 chr5 39908202 39908250 -159721900 - L2 LINE L2 -86 3227 3179 21 0 0 0 chr5 39908757 39908778 -159721372 + AT_rich Low_complexity Low_complexity 1 21 0 741 240 62 61 chr5 39912790 39913062 -159717088 - MIR SINE MIR 0 262 8 180 0 0 0 chr5 39914132 39914152 -159715998 + (A)n Simple_repeat Simple_repeat 1 20 0 279 79 0 0 chr5 39914935 39914973 -159715177 + (CA)n Simple_repeat Simple_repeat 1 38 0 216 67 0 0 chr5 39915057 39915087 -159715063 + (CA)n Simple_repeat Simple_repeat 1 30 0 1396 164 4 35 chr5 39915220 39915507 -159714643 + AluJb SINE Alu 51 329 0 629 213 148 20 chr5 39915510 39915712 -159714438 - MIR SINE MIR -21 241 14 235 243 14 43 chr5 39916888 39916958 -159713192 + MIR SINE MIR 2 69 -193 412 241 179 25 chr5 39918022 39918184 -159711966 + MIR3 SINE MIR 16 202 -6 297 75 0 0 chr5 39918238 39918278 -159711872 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 2191 92 0 0 chr5 39918793 39919075 -159711075 + AluSg1 SINE Alu 7 288 -21 198 0 0 0 chr5 39920288 39920310 -159709840 + (T)n Simple_repeat Simple_repeat 1 22 0 960 245 140 30 chr5 39920482 39920853 -159709297 - L1MC4a LINE L1 -1851 5957 5546 1403 177 117 0 chr5 39922230 39922496 -159707654 + AluJo SINE Alu 1 297 -15 241 270 9 135 chr5 39922820 39922931 -159707219 - MIR3 SINE MIR -15 193 97 389 266 63 38 chr5 39922937 39923095 -159707055 + MIR SINE MIR 34 195 -67 1020 260 116 50 chr5 39923500 39923784 -159706366 - L2 LINE L2 -1 3312 3048 2229 105 0 0 chr5 39923784 39924078 -159706072 - AluSx SINE Alu -18 294 1 1020 260 116 50 chr5 39924078 39924472 -159705678 - L2 LINE L2 -265 3048 2587 272 295 71 54 chr5 39924486 39924598 -159705552 - MIR SINE MIR -59 149 36 614 64 65 2 chr5 39924711 39924803 -159705347 + MLT1E LTR MaLR 80 169 -424 2136 107 3 31 chr5 39925700 39926017 -159704133 + AluSg SINE Alu 1 308 -2 197 277 119 10 chr5 39926473 39926574 -159703576 + MIR SINE MIR 3 114 -148 382 225 11 11 chr5 39926590 39926679 -159703471 + MIR SINE MIR 69 157 -105 402 257 34 73 chr5 39927181 39927302 -159702848 + MIR SINE MIR 16 138 -124 2165 128 3 0 chr5 39927302 39927606 -159702544 + AluSx SINE Alu 1 305 -7 402 257 34 73 chr5 39927606 39927680 -159702470 + MIR SINE MIR 138 213 -49 313 330 52 19 chr5 39929720 39929932 -159700218 + L1ME LINE L1 5609 5827 -294 722 281 74 4 chr5 39930060 39930291 -159699859 + MIR SINE MIR 13 259 -3 201 74 0 0 chr5 39931684 39931711 -159698439 + (T)n Simple_repeat Simple_repeat 1 27 0 314 171 29 14 chr5 39934295 39934365 -159695785 - Charlie8 DNA MER1_type -2003 414 344 263 167 45 30 chr5 39934466 39934532 -159695618 - Charlie8 DNA MER1_type -2256 161 95 295 122 232 37 chr5 39935752 39935834 -159694316 - L2 LINE L2 0 3313 3216 989 207 194 45 chr5 39936049 39936262 -159693888 + MER113 DNA MER1_type? 61 241 -280 2211 116 0 0 chr5 39936262 39936599 -159693551 + AluSx SINE Alu 1 337 0 989 207 194 45 chr5 39936599 39936784 -159693366 + MER113 DNA MER1_type? 241 521 0 224 340 124 0 chr5 39936802 39936899 -159693251 - L3 LINE CR1 -79 1498 1390 315 256 273 0 chr5 39937492 39937613 -159692537 + MIR SINE MIR 106 259 -3 462 18 0 0 chr5 39938326 39938381 -159691769 + (TG)n Simple_repeat Simple_repeat 2 56 0 386 266 70 31 chr5 39938455 39938583 -159691567 - L2 LINE L2 -4 3268 3136 832 121 24 12 chr5 39938749 39938914 -159691236 + CT-rich Low_complexity Low_complexity 2 168 0 181 260 62 52 chr5 39939115 39939211 -159690939 - L3 LINE CR1 -27 1550 1454 474 256 267 39 chr5 39939238 39939601 -159690549 - L3 LINE CR1 -218 1359 914 442 292 8 8 chr5 39940163 39940283 -159689867 - MER5B DNA MER1_type -56 122 3 267 311 80 71 chr5 39940360 39940585 -159689565 + L2 LINE L2 3015 3241 -31 2386 83 0 0 chr5 39940964 39941264 -159688886 - AluSg SINE Alu -10 300 1 785 251 68 0 chr5 39941431 39941622 -159688528 + MIR SINE MIR 38 241 -21 350 324 81 16 chr5 39941765 39941950 -159688200 - L1ME LINE L1 -362 5759 5563 336 48 0 0 chr5 39943274 39943316 -159686834 + (CA)n Simple_repeat Simple_repeat 2 43 0 2352 153 3 5 chr5 39944832 39945212 -159684938 - L1MB8 LINE L1 0 6178 5800 234 125 0 0 chr5 39945245 39945277 -159684873 + L1ME LINE L1 5774 5805 -361 2341 162 56 54 chr5 39945304 39945841 -159684309 - L1MB8 LINE L1 -382 5802 5265 2024 93 0 63 chr5 39946003 39946349 -159683801 + AluSg SINE Alu 1 327 0 573 150 20 0 chr5 39946791 39946891 -159683259 + L1MB2 LINE L1 6067 6168 -3 2121 108 16 7 chr5 39947610 39947915 -159682235 - AluSg1 SINE Alu -1 308 1 2225 106 3 17 chr5 39951356 39951657 -159678493 + AluSp SINE Alu 6 302 -11 366 186 78 142 chr5 39952579 39952966 -159677184 - L1MC5 LINE L1 -236 7725 7364 228 67 0 0 chr5 39953442 39953472 -159676678 + (A)n Simple_repeat Simple_repeat 1 30 0 267 277 69 19 chr5 39953877 39954036 -159676114 + L2 LINE L2 2953 3119 -153 267 31 0 0 chr5 39954615 39954647 -159675503 + (CA)n Simple_repeat Simple_repeat 1 32 0 180 247 309 12 chr5 39956008 39956062 -159674088 + L2 LINE L2 3150 3254 -18 182 148 0 0 chr5 39956062 39956089 -159674061 + MIR SINE MIR 224 250 -12 2265 106 7 0 chr5 39956141 39956442 -159673708 - AluSg SINE Alu -7 303 1 456 270 23 16 chr5 39958504 39958657 -159671493 - MIR SINE MIR -63 145 19 232 176 39 0 chr5 39959060 39959111 -159671039 - L2 LINE L2 -2 3270 3218 1478 289 113 17 chr5 39959717 39960257 -159669893 + L3 LINE CR1 533 1124 -453 231 354 87 34 chr5 39960283 39960489 -159669661 - L2 LINE L2 -8 3264 3048 220 311 66 54 chr5 39960679 39961004 -159669146 + L3 LINE CR1 1106 1470 -107 586 235 138 28 chr5 39961439 39961656 -159668494 + MIR SINE MIR 1 241 -21 283 253 95 11 chr5 39961828 39961923 -159668227 - MIR SINE MIR -149 113 11 244 212 0 71 chr5 39963200 39963299 -159666851 + CT-rich Low_complexity Low_complexity 4 95 0 2319 94 0 0 chr5 39963438 39963735 -159666415 + AluSx SINE Alu 9 305 -7 2104 84 6 81 chr5 39965506 39965841 -159664309 - AluSx SINE Alu -2 310 1 2135 120 3 3 chr5 39966425 39966733 -159663417 - AluSq SINE Alu -5 308 1 800 221 32 42 chr5 39966783 39967000 -159663150 + MER112 DNA MER1_type 1 215 -45 548 217 36 14 chr5 39967585 39967723 -159662427 - L2 LINE L2 -6 3307 3167 715 266 137 13 chr5 39967882 39968115 -159662035 - MIR SINE MIR 0 262 1 558 259 36 7 chr5 39969809 39969948 -159660202 + MIR SINE MIR 49 191 -71 230 180 0 20 chr5 39972949 39972999 -159657151 + (CA)n Simple_repeat Simple_repeat 2 50 0 190 103 0 0 chr5 39973979 39974008 -159656142 - MIR3 SINE MIR -32 176 148 560 235 82 47 chr5 39974526 39974696 -159655454 - LTR33 LTR ERVL -345 176 1 302 308 48 0 chr5 39975593 39975697 -159654453 - MIR3 SINE MIR -33 175 67 363 286 134 49 chr5 39976872 39977096 -159653054 - MIR SINE MIR -7 255 13 189 301 48 24 chr5 39978653 39978736 -159651414 - MIR SINE MIR -73 189 105 501 235 20 0 chr5 39978803 39978905 -159651245 - HAL1 LINE L1 -2399 108 5 249 33 0 0 chr5 39978940 39978970 -159651180 + (TG)n Simple_repeat Simple_repeat 2 31 0 261 97 97 0 chr5 39979107 39979169 -159650981 - L1ME4a LINE L1 -31 6090 6023 777 285 78 22 chr5 39979767 39980125 -159650025 - L2 LINE L2 -5 3308 2931 607 213 51 15 chr5 39981171 39981368 -159648782 - MER113 DNA MER1_type? -286 235 32 2213 110 7 0 chr5 39982936 39983235 -159646915 + AluSx SINE Alu 1 301 -11 311 227 192 61 chr5 39984318 39984547 -159645603 - L1MC4 LINE L1 -176 7866 7608 251 179 30 60 chr5 39984828 39984895 -159645255 - MLT1J LTR MaLR -28 483 419 469 231 128 0 chr5 39985048 39985165 -159644985 - MLT1J LTR MaLR -312 199 68 238 281 94 23 chr5 39985555 39985683 -159644467 + MIR SINE MIR 121 257 -5 1927 163 3 0 chr5 39985727 39986022 -159644128 + AluSx SINE Alu 1 296 -16 275 347 68 0 chr5 39987118 39987265 -159642885 + MIR SINE MIR 82 238 -24 1238 171 29 154 chr5 39987319 39987569 -159642581 - Charlie1b DNA MER1_type -2271 490 332 2358 98 3 0 chr5 39987569 39987876 -159642274 - AluSq SINE Alu -5 308 1 1238 171 29 154 chr5 39987876 39988108 -159642042 - Charlie1b DNA MER1_type -2429 332 73 493 229 16 0 chr5 39989127 39989249 -159640901 + MIR3 SINE MIR 82 205 -3 1763 95 117 26 chr5 39991857 39992130 -159638020 - AluJo SINE Alu -14 298 1 423 147 53 0 chr5 39993288 39993363 -159636787 - MER53 DNA DNA 0 189 111 238 108 27 0 chr5 39993405 39993442 -159636708 - MER53 DNA DNA -151 38 1 202 238 0 0 chr5 39993789 39993831 -159636319 + T-rich Low_complexity Low_complexity 5 46 0 275 264 45 27 chr5 39994920 39995030 -159635120 + MIR SINE MIR 118 229 -33 827 133 28 133 chr5 39995800 39995945 -159634205 + MER5A DNA MER1_type 1 119 -70 854 201 6 6 chr5 39995945 39996109 -159634041 - FAM SINE Alu -11 164 1 827 133 28 133 chr5 39996109 39996174 -159633976 + MER5A DNA MER1_type 119 189 0 419 245 81 2 chr5 39996185 39996348 -159633802 + MIR SINE MIR 19 192 -70 996 184 40 93 chr5 39996581 39996859 -159633291 + MLT1B LTR MaLR 1 263 -127 966 176 0 0 chr5 39997169 39997322 -159632828 + FRAM SINE Alu 1 153 -23 237 65 0 0 chr5 39997355 39997386 -159632764 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 244 292 67 0 chr5 39997403 39997492 -159632658 - MIR SINE MIR -80 182 88 2547 56 0 3 chr5 39997639 39997944 -159632206 - AluY SINE Alu -7 304 1 461 219 256 6 chr5 39997944 39998108 -159632042 - MER112 DNA MER1_type -1 259 55 185 194 0 0 chr5 39998891 39998927 -159631223 - L2 LINE L2 -970 2344 2309 523 290 91 26 chr5 39999034 39999265 -159630885 - MIR SINE MIR 0 262 17 705 293 107 4 chr5 39999300 39999525 -159630625 - MIR SINE MIR 0 262 15 188 286 63 48 chr5 39999849 39999975 -159630175 + L2 LINE L2 2717 2844 -470 229 273 222 15 chr5 40000141 40000339 -159629811 + L2 LINE L2 2985 3223 -49 185 139 23 0 chr5 40000359 40000402 -159629748 + (TA)n Simple_repeat Simple_repeat 1 44 0 278 294 58 0 chr5 40000480 40000594 -159629556 - MER20B DNA MER1_type -17 202 81 21 71 0 0 chr5 40002408 40002450 -159627700 + AT_rich Low_complexity Low_complexity 1 42 0 800 204 0 19 chr5 40002450 40002612 -159627538 - MER3 DNA MER1_type -86 123 12 1685 168 10 16 chr5 40002768 40003071 -159627079 + AluJb SINE Alu 3 303 -9 694 272 43 39 chr5 40003535 40003767 -159626383 + MIR SINE MIR 24 256 -6 189 260 39 39 chr5 40003802 40003879 -159626271 + MIR SINE MIR 27 103 -159 1526 230 91 34 chr5 40004879 40005353 -159624797 - MLT1D LTR MaLR 0 505 5 234 0 0 0 chr5 40006353 40006379 -159623771 + (TAA)n Simple_repeat Simple_repeat 2 27 0 264 293 0 0 chr5 40006577 40006659 -159623491 + MIR SINE MIR 168 249 -13 1390 187 138 59 chr5 40008630 40009037 -159621113 + MLT1D LTR MaLR 4 442 -63 699 230 29 6 chr5 40009116 40009290 -159620860 - MER5B DNA MER1_type 0 178 1 419 311 55 0 chr5 40009529 40009693 -159620457 - LTR67 LTR ERVL -3 554 382 962 287 25 102 chr5 40010484 40011006 -159619144 - ERVL LTR ERVL -331 5433 4952 656 181 0 39 chr5 40011006 40011133 -159619017 + L1MC4 LINE L1 7390 7511 -531 624 290 77 39 chr5 40011133 40011471 -159618679 - ERVL LTR ERVL -1639 4125 3775 1364 269 53 10 chr5 40011757 40012170 -159617980 - ERVL LTR ERVL -2304 3350 2920 1196 88 132 28 chr5 40012172 40012354 -159617796 - AluSc SINE Alu -10 299 99 1472 324 89 9 chr5 40012358 40013035 -159617115 - ERVL LTR ERVL -2808 2956 2226 727 316 78 4 chr5 40013174 40013430 -159616720 - ERVL LTR ERVL -3715 2049 1775 672 324 68 18 chr5 40013578 40014268 -159615882 - ERVL LTR ERVL -4204 1560 815 355 372 45 24 chr5 40014308 40014598 -159615552 - ERVL LTR ERVL -5061 703 408 302 306 81 25 chr5 40014967 40015127 -159615023 - LTR67 LTR ERVL -6 551 383 2296 118 0 3 chr5 40016495 40016808 -159613342 - AluSx SINE Alu 0 312 1 189 214 0 0 chr5 40017672 40017714 -159612436 + (CA)n Simple_repeat Simple_repeat 1 42 0 2595 59 0 3 chr5 40017860 40018165 -159611985 - AluY SINE Alu -7 304 1 242 239 15 15 chr5 40018166 40018233 -159611917 + MIR SINE MIR 116 182 -80 417 281 26 0 chr5 40018789 40018903 -159611247 - MER5A DNA MER1_type 0 189 73 356 302 62 8 chr5 40018904 40019033 -159611117 - MER91C DNA MER1_type -1 139 4 2234 127 0 3 chr5 40019118 40019425 -159610725 + AluSx SINE Alu 1 306 -6 672 304 40 37 chr5 40020379 40020701 -159609449 + LTR16C LTR ERVL 156 478 -13 246 296 107 15 chr5 40020935 40021131 -159609019 - MIR SINE MIR -13 249 36 187 327 0 0 chr5 40021452 40021507 -159608643 + L2 LINE L2 3251 3305 -8 308 333 9 0 chr5 40022174 40022279 -159607871 + MER5A DNA MER1_type 1 106 -83 862 178 22 6 chr5 40024844 40025024 -159605126 + MIR SINE MIR 18 200 -62 1740 142 14 18 chr5 40025798 40026080 -159604070 + AluJo SINE Alu 32 312 0 195 280 168 16 chr5 40027147 40027272 -159602878 + L2 LINE L2 2550 2693 -621 397 137 0 27 chr5 40027617 40027690 -159602460 - LTR16C LTR ERVL 0 491 421 280 261 0 0 chr5 40027677 40027742 -159602408 + LTR16A1 LTR ERVL 372 436 -21 * 273 306 66 41 chr5 40028552 40028673 -159601477 - MIR SINE MIR -84 124 1 198 71 0 0 chr5 40028840 40028868 -159601282 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 962 234 133 71 chr5 40028868 40029320 -159600830 - L2 LINE L2 -13 3300 2821 2433 53 0 17 chr5 40029909 40030208 -159599942 + AluY SINE Alu 1 294 -17 285 283 127 24 chr5 40030595 40030761 -159599389 + MIR SINE MIR 6 188 -74 435 266 130 11 chr5 40031833 40032010 -159598140 + MIR SINE MIR 21 218 -44 289 200 126 21 chr5 40032077 40032172 -159597978 - MIR SINE MIR -93 169 65 207 0 0 0 chr5 40032348 40032371 -159597779 + (A)n Simple_repeat Simple_repeat 1 23 0 186 133 0 0 chr5 40032427 40032457 -159597693 + (TTA)n Simple_repeat Simple_repeat 3 32 0 186 241 86 17 chr5 40032917 40032975 -159597175 + L2 LINE L2 3173 3234 -38 294 234 109 80 chr5 40033509 40033684 -159596466 - MIR SINE MIR 0 262 83 649 253 50 25 chr5 40033696 40033898 -159596252 - MIR SINE MIR 0 262 56 477 204 191 7 chr5 40033908 40034055 -159596095 - MIR SINE MIR 0 262 89 205 351 0 0 chr5 40034144 40034201 -159595949 - MIR SINE MIR -186 76 20 353 293 180 15 chr5 40034504 40034722 -159595428 - MIR SINE MIR 0 262 17 21 0 0 0 chr5 40034851 40034872 -159595278 + AT_rich Low_complexity Low_complexity 1 21 0 2155 115 7 7 chr5 40035000 40035295 -159594855 - AluSx SINE Alu -17 295 1 329 0 24 0 chr5 40035375 40035416 -159594734 + (CA)n Simple_repeat Simple_repeat 2 43 0 1880 160 0 7 chr5 40035785 40036079 -159594071 + AluJo SINE Alu 1 292 -20 22 0 0 0 chr5 40039248 40039270 -159590880 + AT_rich Low_complexity Low_complexity 1 22 0 858 273 12 24 chr5 40039305 40039554 -159590596 - MIR SINE MIR -12 250 5 338 311 8 17 chr5 40040257 40040376 -159589774 + MIR SINE MIR 3 120 -142 1721 150 0 69 chr5 40040430 40040769 -159589381 - AluJb SINE Alu 0 318 1 428 183 42 78 chr5 40040875 40041017 -159589133 + L2 LINE L2 2919 3055 -217 449 289 14 35 chr5 40041237 40041379 -159588771 + L2 LINE L2 3134 3272 0 394 219 148 16 chr5 40041384 40041512 -159588638 + MIR SINE MIR 106 250 -12 203 220 17 34 chr5 40041967 40042026 -159588124 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 191 270 9 130 chr5 40042027 40042142 -159588008 - L2 LINE L2 -97 3175 3075 266 298 29 10 chr5 40042191 40042295 -159587855 - L3b LINE CR1 -217 1366 1261 2093 140 89 6 chr5 40043095 40043453 -159586697 - MLT1B LTR MaLR 0 390 3 239 367 0 8 chr5 40043576 40043704 -159586446 + L2 LINE L2 2211 2337 -977 923 240 9 14 chr5 40044545 40044774 -159585376 - MIR SINE MIR 0 262 37 1907 190 49 57 chr5 40044884 40045390 -159584760 + MLT1D LTR MaLR 1 502 -3 446 286 8 8 chr5 40046322 40046455 -159583695 + MIR SINE MIR 2 134 -128 211 231 0 19 chr5 40046787 40046839 -159583311 - MIR SINE MIR -161 101 51 346 202 210 8 chr5 40047996 40048120 -159582030 + MER5A DNA MER1_type 41 189 0 200 241 17 0 chr5 40048531 40048589 -159581561 + (TA)n Simple_repeat Simple_repeat 2 60 0 270 250 0 52 chr5 40049214 40049310 -159580840 + L2 LINE L2 3213 3303 -10 7577 30 14 0 chr5 40049655 40050611 -159579539 + L1PA4 LINE L1 5185 6152 -3 24 0 0 0 chr5 40050611 40050635 -159579515 + AT_rich Low_complexity Low_complexity 1 24 0 489 250 136 59 chr5 40050688 40050924 -159579226 - MIR SINE MIR -1 261 8 753 239 160 52 chr5 40051136 40051442 -159578708 + LTR16C LTR ERVL 153 491 0 1769 175 7 10 chr5 40052498 40052795 -159577355 + AluJb SINE Alu 1 296 -16 2157 106 7 13 chr5 40052797 40053100 -159577050 + AluSg SINE Alu 1 301 -9 2235 113 7 0 chr5 40053768 40054068 -159576082 - AluSx SINE Alu -9 303 2 373 273 75 117 chr5 40054208 40054543 -159575607 + LTR67 LTR ERVL 3 318 -239 2916 79 72 10 chr5 40054543 40054916 -159575234 + MLT2A1 LTR ERVL 3 406 -38 549 0 0 0 chr5 40054916 40054977 -159575173 + (TA)n Simple_repeat Simple_repeat 2 62 0 2916 79 72 10 chr5 40054977 40055019 -159575131 + MLT2A1 LTR ERVL 406 444 0 373 273 75 117 chr5 40055019 40055112 -159575038 + LTR67 LTR ERVL 318 413 -144 21 0 0 0 chr5 40055435 40055456 -159574694 + AT_rich Low_complexity Low_complexity 1 21 0 272 246 69 54 chr5 40055860 40055990 -159574160 - MIR SINE MIR -15 247 116 197 33 33 0 chr5 40056177 40056207 -159573943 + (CA)n Simple_repeat Simple_repeat 1 31 0 187 244 0 0 chr5 40058127 40058168 -159571982 - MIR SINE MIR -124 138 98 273 259 42 167 chr5 40058981 40059244 -159570906 + L2 LINE L2 3016 3245 -27 204 340 49 64 chr5 40059258 40059461 -159570689 - L2 LINE L2 -1950 1364 1165 2291 205 93 76 chr5 40059872 40060507 -159569643 + MLT1E1 LTR MaLR 1 646 -8 2141 148 25 15 chr5 40060986 40061384 -159568766 + L1MA6 LINE L1 5890 6291 -9 641 177 122 83 chr5 40061457 40061638 -159568512 + MER20 DNA MER1_type 27 214 -5 16552 109 22 10 chr5 40061820 40064207 -159565943 - Tigger1 DNA MER2_type 0 2418 2 942 227 34 51 chr5 40064488 40064581 -159565569 - LTR16A1 LTR ERVL 0 457 364 2684 161 31 2 chr5 40064581 40065033 -159565117 - MLT1C LTR MaLR -2 465 1 942 227 34 51 chr5 40065033 40065234 -159564916 - LTR16A1 LTR ERVL -93 364 168 529 133 92 0 chr5 40065324 40065422 -159564728 - MER5A DNA MER1_type -52 137 31 225 100 0 0 chr5 40065422 40065452 -159564698 - Charlie1 DNA MER1_type -2731 30 1 329 164 86 103 chr5 40065456 40065572 -159564578 - LTR16A1 LTR ERVL -332 125 12 302 254 100 15 chr5 40065607 40065737 -159564413 - L2 LINE L2 -2874 440 300 884 145 0 0 chr5 40066669 40066793 -159563357 + FLAM_C SINE Alu 1 124 -19 381 22 0 0 chr5 40067398 40067444 -159562706 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1510 154 0 98 chr5 40067473 40067791 -159562359 - AluJb SINE Alu -25 287 1 236 183 32 75 chr5 40067926 40068019 -159562131 - L1ME4a LINE L1 -49 6072 5984 528 212 71 0 chr5 40068058 40068171 -159561979 + MIR SINE MIR 3 123 -139 2002 201 68 27 chr5 40068705 40069188 -159560962 - MLT1D LTR MaLR 0 505 3 1174 248 164 24 chr5 40070673 40071141 -159559009 - MLT1H1 LTR MaLR -7 548 15 393 306 64 0 chr5 40071190 40071347 -159558803 + MLT1L LTR MaLR 447 613 -2 216 0 0 0 chr5 40071741 40071765 -159558385 + (A)n Simple_repeat Simple_repeat 1 24 0 198 213 21 21 chr5 40071847 40071894 -159558256 - MER5C DNA MER1_type -263 61 15 214 310 0 0 chr5 40071948 40072006 -159558144 - L3b LINE CR1 -131 1452 1395 524 228 79 50 chr5 40072364 40072605 -159557545 - MLT1J LTR MaLR -35 476 229 2257 123 15 33 chr5 40072761 40073067 -159557083 - MLT1B LTR MaLR 0 390 91 2295 128 31 17 chr5 40073067 40073425 -159556725 - THE1B LTR MaLR -1 363 1 2257 123 15 33 chr5 40073425 40073515 -159556635 - MLT1B LTR MaLR -299 91 1 776 290 48 0 chr5 40075057 40075309 -159554841 + HERVL LTR ERVL 2833 3096 -2558 304 282 0 45 chr5 40075405 40075515 -159554635 + HERVL LTR ERVL 3269 3373 -2391 1708 232 37 35 chr5 40075534 40075570 -159554580 - MLT1D LTR MaLR -14 491 457 1802 219 45 16 chr5 40075570 40076058 -159554092 + MLT1D LTR MaLR 1 502 -3 1708 232 37 35 chr5 40076058 40076509 -159553641 - MLT1D LTR MaLR -48 457 3 2057 147 0 13 chr5 40076548 40076861 -159553289 - AluSx SINE Alu -3 309 1 1307 278 78 27 chr5 40076863 40077427 -159552723 + HERVL LTR ERVL 3384 3976 -1788 568 241 28 0 chr5 40077432 40077573 -159552577 + MLT1G1 LTR MaLR 1 145 -450 1230 108 69 68 chr5 40077608 40078020 -159552130 + MER51A LTR ERV1 1 634 0 1176 237 128 6 chr5 40078021 40078380 -159551770 + MLT1G1 LTR MaLR 180 582 -13 1050 300 109 2 chr5 40078392 40078852 -159551298 + HERVL LTR ERVL 3981 4489 -1275 2126 110 0 20 chr5 40078983 40079282 -159550868 + AluSq SINE Alu 1 293 -20 2511 249 42 14 chr5 40079399 40080114 -159550036 + L1MEc LINE L1 49 783 -5613 189 0 0 0 chr5 40080196 40080217 -159549933 + (T)n Simple_repeat Simple_repeat 1 21 0 2776 206 2 58 chr5 40080612 40081213 -159548937 - MLT1F1 LTR MaLR 0 567 1 269 213 66 0 chr5 40083277 40083338 -159546812 - L2 LINE L2 -4 3309 3245 23 0 0 0 chr5 40083468 40083491 -159546659 + AT_rich Low_complexity Low_complexity 1 23 0 305 277 43 0 chr5 40084156 40084250 -159545900 - MIR SINE MIR -29 233 136 350 102 0 0 chr5 40084257 40084329 -159545821 - Alu SINE Alu 0 306 235 321 219 158 0 chr5 40084598 40084712 -159545438 + Charlie4a DNA MER1_type 138 269 -239 4366 175 149 65 chr5 40084712 40086278 -159543872 + pTR5 LTR ERV1 742 2438 0 1014 183 20 48 chr5 40086278 40086301 -159543849 + Charlie4a DNA MER1_type 264 286 -1675 2527 104 31 8 chr5 40086301 40086687 -159543463 + MER48 LTR ERV1 1 395 -3 1014 183 20 48 chr5 40086687 40086915 -159543235 + Charlie4a DNA MER1_type 286 508 0 234 286 39 0 chr5 40087022 40087099 -159543051 + MLT1J LTR MaLR 274 353 -158 1810 139 114 18 chr5 40087316 40087648 -159542502 - THE1B LTR MaLR 0 364 1 184 349 89 77 chr5 40088225 40088460 -159541690 + L2 LINE L2 2940 3177 -95 687 279 37 40 chr5 40089272 40089544 -159540606 - LTR16C LTR ERVL 0 491 221 2021 162 0 0 chr5 40089587 40089883 -159540267 + AluJb SINE Alu 1 296 -16 233 176 20 0 chr5 40091270 40091321 -159538829 - MLT2F LTR ERVL 0 663 612 228 135 0 0 chr5 40091328 40091365 -159538785 + (TG)n Simple_repeat Simple_repeat 1 37 0 771 165 61 30 chr5 40091567 40091731 -159538419 - MLT1E3 LTR MaLR -393 231 63 463 281 14 7 chr5 40091744 40091890 -159538260 - MLT2F LTR ERVL -516 147 1 2453 153 22 7 chr5 40092281 40092737 -159537413 - L1MB3 LINE L1 -2 6181 5719 1091 131 24 34 chr5 40092739 40092945 -159537205 - L1MB3 LINE L1 -528 5643 5440 313 203 76 114 chr5 40093300 40093458 -159536692 - MLT1H LTR MaLR -243 306 155 28 29 0 0 chr5 40095467 40095502 -159534648 + AT_rich Low_complexity Low_complexity 1 35 0 1697 161 6 46 chr5 40095794 40096117 -159534033 + AluJo SINE Alu 1 310 -2 198 0 0 0 chr5 40097293 40097315 -159532835 + (TG)n Simple_repeat Simple_repeat 2 23 0 1795 108 4 0 chr5 40097507 40097766 -159532384 - L1PB1 LINE L1 -13 6138 5879 1632 164 36 11 chr5 40097943 40098217 -159531933 + AluJo SINE Alu 12 292 -20 596 276 103 13 chr5 40098483 40098841 -159531309 - LTR33A LTR ERVL 0 523 135 1349 209 100 31 chr5 40098858 40099048 -159531102 - MLT1A2 LTR MaLR 0 374 198 198 0 0 0 chr5 40099048 40099070 -159531080 + (GA)n Simple_repeat Simple_repeat 1 22 0 1349 209 100 31 chr5 40099070 40099229 -159530921 - MLT1A2 LTR MaLR -176 198 1 401 286 100 14 chr5 40099326 40099466 -159530684 - MIR SINE MIR -79 183 32 2262 110 0 0 chr5 40099683 40099982 -159530168 + AluSx SINE Alu 2 300 -12 397 325 162 4 chr5 40100634 40100868 -159529282 + L2 LINE L2 758 1028 -2286 25 0 0 0 chr5 40101077 40101102 -159529048 + AT_rich Low_complexity Low_complexity 1 25 0 485 147 20 29 chr5 40101243 40101345 -159528805 - MLT1I LTR MaLR 0 409 309 323 352 0 9 chr5 40101635 40101740 -159528410 - L1ME LINE L1 -379 5791 5688 251 333 36 0 chr5 40101742 40101853 -159528297 - MIR SINE MIR 0 262 148 274 346 122 10 chr5 40102175 40102470 -159527680 + LTR16C LTR ERVL 156 483 -8 718 290 103 38 chr5 40102484 40102714 -159527436 + LTR16A LTR ERVL 16 284 -166 2454 145 52 5 chr5 40102714 40103121 -159527029 + MSTB LTR MaLR 1 426 0 718 290 103 38 chr5 40103121 40103286 -159526864 + LTR16A LTR ERVL 284 437 -13 299 321 80 11 chr5 40103695 40103882 -159526268 + ERVL LTR ERVL 4462 4661 -1103 1395 151 35 8 chr5 40103886 40104145 -159526005 + L1MB4 LINE L1 5915 6180 0 22 0 0 0 chr5 40104239 40104261 -159525889 + AT_rich Low_complexity Low_complexity 1 22 0 1964 148 0 23 chr5 40104283 40104588 -159525562 - AluSg SINE Alu -12 298 1 436 172 20 0 chr5 40106526 40106625 -159523525 - L1MA10 LINE L1 -9 6325 6225 4413 190 89 124 chr5 40106626 40106719 -159523431 - L1ME LINE L1 -595 5571 5476 1689 182 90 27 chr5 40106719 40107120 -159523030 + MSTC LTR MaLR 3 428 0 4413 190 89 124 chr5 40107120 40107142 -159523008 - L1ME LINE L1 -690 5476 5455 2545 72 3 0 chr5 40107142 40107449 -159522701 + AluSp SINE Alu 1 308 -5 4413 190 89 124 chr5 40107449 40108308 -159521842 - L1ME LINE L1 -711 5455 4567 1319 180 16 25 chr5 40108308 40108553 -159521597 - AluJb SINE Alu -69 243 1 4413 190 89 124 chr5 40108553 40109860 -159520290 - L1ME LINE L1 -1599 4567 3152 764 241 79 0 chr5 40109857 40110085 -159520065 - L1ME LINE L1 -3493 2653 2408 * 21 0 0 0 chr5 40110102 40110123 -159520027 + AT_rich Low_complexity Low_complexity 1 21 0 219 269 356 0 chr5 40110145 40110249 -159519901 + MIR3 SINE MIR 34 174 -34 28 61 0 0 chr5 40110469 40110518 -159519632 + AT_rich Low_complexity Low_complexity 1 49 0 265 197 14 0 chr5 40110646 40110717 -159519433 - L1M4 LINE L1 -3257 2889 2818 472 248 26 9 chr5 40110719 40110832 -159519318 - MIR SINE MIR -146 116 2 2016 173 9 3 chr5 40111123 40111465 -159518685 + MER2 DNA MER2_type 1 344 0 2289 95 3 13 chr5 40111537 40111853 -159518297 - AluSp SINE Alu 0 313 1 463 321 166 33 chr5 40112034 40112395 -159517755 - MLT1K LTR MaLR -18 570 162 1506 157 196 35 chr5 40112759 40112955 -159517195 + MLT1C LTR MaLR 1 164 -303 1979 131 70 12 chr5 40112955 40113284 -159516866 - MER7A DNA MER2_type 0 346 1 1506 157 196 35 chr5 40113284 40113489 -159516661 + MLT1C LTR MaLR 164 467 0 14168 32 10 1 chr5 40113627 40116115 -159514035 + L1PA4 LINE L1 3634 6155 0 246 250 0 33 chr5 40116468 40116528 -159513622 + L2 LINE L2 3146 3203 -69 216 319 72 14 chr5 40116705 40116774 -159513376 + L2 LINE L2 3151 3223 -49 325 298 67 94 chr5 40117716 40118058 -159512092 + HAL1 LINE L1 971 1303 -1204 1782 226 93 15 chr5 40118129 40118603 -159511547 + MLT1G1 LTR MaLR 85 595 0 332 283 10 0 chr5 40118913 40119012 -159511138 + L1ME3A LINE L1 5501 5600 -2395 566 303 124 3 chr5 40119016 40119306 -159510844 + L1ME3A LINE L1 5561 5885 -285 33 66 0 0 chr5 40119445 40119506 -159510644 + AT_rich Low_complexity Low_complexity 1 61 0 2075 123 48 31 chr5 40119582 40119940 -159510210 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr5 40121459 40121488 -159508662 + AT_rich Low_complexity Low_complexity 1 29 0 259 228 198 0 chr5 40121737 40121838 -159508312 + MIR SINE MIR 118 238 -24 22 0 0 0 chr5 40122314 40122336 -159507814 + AT_rich Low_complexity Low_complexity 1 22 0 1356 244 85 48 chr5 40122374 40122802 -159507348 + L1MC4 LINE L1 7443 7899 -143 2380 105 0 3 chr5 40122802 40123115 -159507035 + AluSx SINE Alu 1 312 0 1356 244 85 48 chr5 40123115 40123252 -159506898 + L1MC4 LINE L1 7899 8029 -13 24 0 0 0 chr5 40123571 40123595 -159506555 + AT_rich Low_complexity Low_complexity 1 24 0 333 310 44 51 chr5 40123627 40123785 -159506365 + MIR SINE MIR 106 262 0 1005 177 68 0 chr5 40124130 40124322 -159505828 - MSTD LTR MaLR -12 384 180 6073 145 26 23 chr5 40124333 40126452 -159503698 - L1PB2 LINE L1 -3 6148 4027 230 103 10 124 chr5 40126704 40126801 -159503349 + L1MA2 LINE L1 6218 6303 -1 1807 256 75 17 chr5 40126801 40127320 -159502830 + MLT1H1 LTR MaLR 7 555 0 442 255 64 64 chr5 40127824 40127958 -159502192 + MIR SINE MIR 50 186 -76 2129 102 10 0 chr5 40127958 40128251 -159501899 + AluSq SINE Alu 1 296 -17 442 255 64 64 chr5 40128251 40128273 -159501877 + MIR SINE MIR 185 206 -56 200 219 0 24 chr5 40128370 40128411 -159501739 - L2 LINE L2 -18 3254 3215 287 85 21 0 chr5 40128997 40129044 -159501106 + (CAAAAA)n Simple_repeat Simple_repeat 1 48 0 383 263 10 25 chr5 40129045 40129452 -159500698 + GA-rich Low_complexity Low_complexity 1 401 0 9290 196 13 20 chr5 40129556 40131651 -159498499 - L1 LINE L1 -1538 4608 2527 605 254 3 0 chr5 40131661 40131806 -159498344 - MSTC LTR MaLR -217 148 1 197 283 33 0 chr5 40131806 40131866 -159498284 - L2 LINE L2 -1689 1625 1564 1709 279 11 15 chr5 40131932 40132406 -159497744 - L2 LINE L2 -1956 1358 887 1670 169 36 0 chr5 40132410 40132689 -159497461 + AluJb SINE Alu 13 301 -11 375 161 0 32 chr5 40132693 40132786 -159497364 + GA-rich Low_complexity Low_complexity 1 90 0 2016 253 76 83 chr5 40133256 40133491 -159496659 - L2 LINE L2 -2462 852 617 1677 140 32 3 chr5 40133491 40133799 -159496351 + L1MA9 LINE L1 5992 6308 -4 2016 253 76 83 chr5 40133799 40134421 -159495729 - L2 LINE L2 -2697 617 1 266 200 0 17 chr5 40134729 40134789 -159495361 - L1M4 LINE L1 -1514 4632 4574 185 231 0 0 chr5 40134803 40134842 -159495308 + L2 LINE L2 3275 3313 0 1728 144 65 44 chr5 40135748 40136115 -159494035 + THE1C LTR MaLR 1 375 0 1850 147 14 0 chr5 40136321 40136633 -159493517 - AluSx SINE Alu 0 316 1 2220 131 0 0 chr5 40136775 40137087 -159493063 + AluSx SINE Alu 1 312 0 23 0 0 0 chr5 40137087 40137110 -159493040 + AT_rich Low_complexity Low_complexity 1 23 0 2351 79 0 0 chr5 40137460 40137751 -159492399 + AluSg SINE Alu 1 291 -19 201 196 0 0 chr5 40137788 40137834 -159492316 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 463 274 99 61 chr5 40139260 40139523 -159490627 + MLT1L LTR MaLR 1 273 -342 227 296 17 17 chr5 40139657 40139772 -159490378 + MLT1L LTR MaLR 497 611 -4 766 107 23 38 chr5 40139860 40139991 -159490159 + AluJo SINE Alu 5 133 -169 1995 98 16 70 chr5 40140002 40140318 -159489832 + AluSx SINE Alu 1 299 -13 445 309 13 26 chr5 40140616 40140768 -159489382 + MER5A DNA MER1_type 1 150 -39 740 277 92 15 chr5 40141832 40142103 -159488047 - MER102b DNA MER1_type -45 296 5 22 35 0 0 chr5 40142186 40142215 -159487935 + AT_rich Low_complexity Low_complexity 1 29 0 1508 164 19 7 chr5 40142809 40143127 -159487023 + MER33 DNA MER1_type 1 315 -9 248 319 237 16 chr5 40143709 40144026 -159486124 + L2 LINE L2 2805 3191 -122 208 319 0 0 chr5 40144075 40144122 -159486028 - MER91 DNA MER1_type 0 140 94 242 188 21 0 chr5 40144164 40144212 -159485938 + L2 LINE L2 3264 3312 -1 333 242 140 34 chr5 40145340 40145518 -159484632 - MIR SINE MIR -14 248 52 300 386 0 8 chr5 40145876 40146003 -159484147 + MIR SINE MIR 4 129 -133 6465 128 38 32 chr5 40146003 40146559 -159483591 - L1M1 LINE L1 -591 5712 5161 2095 152 113 0 chr5 40146559 40146941 -159483209 - MSTA LTR MaLR -3 425 1 6465 128 38 32 chr5 40146941 40147232 -159482918 - L1M1 LINE L1 -1142 5161 4873 906 210 0 0 chr5 40147232 40147394 -159482756 + AluJo SINE Alu 138 299 -3 6465 128 38 32 chr5 40147394 40148101 -159482049 - L1M1 LINE L1 -1430 4873 4157 22 56 0 0 chr5 40148907 40148943 -159481207 + AT_rich Low_complexity Low_complexity 1 36 0 2257 101 7 3 chr5 40149243 40149549 -159480601 - AluSq SINE Alu -3 310 4 872 184 0 7 chr5 40149846 40149998 -159480152 + FAM SINE Alu 1 151 -34 263 106 0 0 chr5 40150151 40150198 -159479952 + AluSp/q SINE Alu 255 301 -2 903 269 106 36 chr5 40150594 40150980 -159479170 + L2 LINE L2 2473 2885 -429 271 235 54 84 chr5 40151197 40151363 -159478787 + L2 LINE L2 3076 3236 -77 790 260 194 25 chr5 40151396 40151762 -159478388 + L2 LINE L2 2886 3313 0 189 256 0 0 chr5 40153027 40153066 -159477084 - L2 LINE L2 -604 2710 2672 22 35 0 0 chr5 40153287 40153316 -159476834 + AT_rich Low_complexity Low_complexity 1 29 0 41 0 0 19 chr5 40153412 40153445 -159476705 + AT_rich Low_complexity Low_complexity 1 34 -17 1773 155 7 7 chr5 40153445 40153729 -159476421 - AluJb SINE Alu -28 284 1 41 0 0 19 chr5 40153729 40153747 -159476403 + AT_rich Low_complexity Low_complexity 34 51 0 318 329 13 24 chr5 40153795 40153963 -159476187 + L1ME LINE L1 5550 5722 -399 420 293 63 37 chr5 40154474 40154730 -159475420 + L1ME4a LINE L1 5175 5422 -747 29945 71 8 10 chr5 40154816 40159779 -159470371 + L1PA6 LINE L1 1205 6152 -2 866 253 123 39 chr5 40159941 40160347 -159469803 + L1ME4a LINE L1 5511 5978 -143 180 111 0 0 chr5 40160347 40160374 -159469776 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 866 253 123 39 chr5 40160374 40160528 -159469622 + L1ME4a LINE L1 5978 6118 -3 1367 102 44 27 chr5 40161146 40161371 -159468779 + MER30 DNA MER1_type 1 229 -1 2083 101 16 10 chr5 40161780 40162088 -159468062 - AluSx SINE Alu -2 310 1 2151 82 0 7 chr5 40162654 40162934 -159467216 - AluSx SINE Alu -18 294 17 220 378 92 18 chr5 40163099 40163263 -159466887 - MIR3 SINE MIR -31 177 2 24 0 0 0 chr5 40163304 40163328 -159466822 + AT_rich Low_complexity Low_complexity 1 24 0 1290 151 0 32 chr5 40163793 40164012 -159466138 + AluJo SINE Alu 93 304 -8 448 258 15 8 chr5 40164130 40164262 -159465888 - MIR SINE MIR 0 262 130 1487 175 42 21 chr5 40164275 40164560 -159465590 - AluJo SINE Alu -18 294 4 220 299 45 0 chr5 40164564 40164631 -159465519 - MIR SINE MIR -106 156 87 312 70 0 0 chr5 40165156 40165199 -159464951 + (TG)n Simple_repeat Simple_repeat 1 43 0 317 250 24 0 chr5 40165622 40165706 -159464444 - L1ME4a LINE L1 -1 6120 6035 414 258 10 0 chr5 40166431 40166528 -159463622 + MER103 DNA DNA 32 129 -37 267 222 111 0 chr5 40166864 40166927 -159463223 - L2 LINE L2 -2 3270 3201 25 0 0 0 chr5 40166959 40166984 -159463166 + AT_rich Low_complexity Low_complexity 1 25 0 493 289 165 19 chr5 40167427 40167790 -159462360 - L1M4 LINE L1 -2185 3961 3546 253 219 171 29 chr5 40167876 40167981 -159462169 - L1ME4a LINE L1 -35 6086 5967 295 261 103 82 chr5 40168321 40168516 -159461634 - L2 LINE L2 0 3313 3115 741 295 62 93 chr5 40168526 40169042 -159461108 - L2 LINE L2 -386 2928 2429 1739 177 20 0 chr5 40169244 40169538 -159460612 + AluJo SINE Alu 1 300 -12 1642 97 62 0 chr5 40169721 40169948 -159460202 - AluSx SINE Alu -69 243 3 4400 163 45 37 chr5 40170780 40172062 -159458088 - L1MB8 LINE L1 0 6178 4903 1635 159 20 33 chr5 40172230 40172532 -159457618 - AluJo SINE Alu -14 298 1 1413 135 24 0 chr5 40173407 40173615 -159456535 - AluSx SINE Alu -95 217 5 2366 64 0 0 chr5 40174585 40174896 -159455254 - AluY SINE Alu 0 311 1 511 161 89 16 chr5 40175259 40175383 -159454767 + FLAM_C SINE Alu 1 133 0 2702 95 5 18 chr5 40175570 40175959 -159454191 - LTR8 LTR ERV1 -105 586 203 24 0 0 0 chr5 40176535 40176559 -159453591 + AT_rich Low_complexity Low_complexity 1 24 0 677 237 81 21 chr5 40178068 40178304 -159451846 + MER112 DNA MER1_type 11 260 0 2409 71 3 0 chr5 40178722 40179030 -159451120 + AluY SINE Alu 1 309 -2 22 35 0 0 chr5 40180296 40180325 -159449825 + AT_rich Low_complexity Low_complexity 1 29 0 213 204 23 0 chr5 40181046 40181090 -159449060 + L2 LINE L2 3264 3308 -5 323 244 233 35 chr5 40181457 40181744 -159448406 - L2 LINE L2 -3 3310 2967 241 258 45 11 chr5 40181797 40181886 -159448264 - L2 LINE L2 -509 2805 2714 186 103 0 0 chr5 40183016 40183045 -159447105 + (CGG)n Simple_repeat Simple_repeat 2 30 0 180 111 0 0 chr5 40183348 40183375 -159446775 + (GGA)n Simple_repeat Simple_repeat 1 27 0 201 39 0 0 chr5 40183559 40183585 -159446565 + (CGG)n Simple_repeat Simple_repeat 1 26 0 496 262 81 0 chr5 40187800 40187972 -159442178 - MIR SINE MIR -6 256 71 480 350 38 0 chr5 40188365 40188631 -159441519 - MARNA DNA Mariner -22 564 289 348 197 0 0 chr5 40188782 40188843 -159441307 - MIR SINE MIR -130 132 72 397 366 47 5 chr5 40188907 40189098 -159441052 - MIR SINE MIR -62 200 2 32 0 0 0 chr5 40189710 40189742 -159440408 + AT_rich Low_complexity Low_complexity 1 32 0 30 45 0 0 chr5 40190250 40190294 -159439856 + AT_rich Low_complexity Low_complexity 1 44 0 228 404 33 20 chr5 40190914 40191065 -159439085 + L2 LINE L2 3109 3261 -11 490 197 72 33 chr5 40192975 40192995 -159437155 - L1MA10 LINE L1 0 6334 6315 1548 160 86 6 chr5 40192995 40193308 -159436842 - L1ME1 LINE L1 -7 6159 5822 511 292 123 77 chr5 40193892 40194454 -159435696 + L2 LINE L2 1984 2571 -743 314 140 0 0 chr5 40195403 40195453 -159434697 + L2 LINE L2 3264 3313 0 21 0 0 0 chr5 40196115 40196136 -159434014 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 40196364 40196392 -159433758 + AT_rich Low_complexity Low_complexity 1 28 0 565 209 80 86 chr5 40196447 40196749 -159433401 - L1ME4a LINE L1 -246 5875 5576 2361 91 3 0 chr5 40197361 40197670 -159432480 + AluY SINE Alu 1 310 -1 197 333 67 0 chr5 40198003 40198108 -159432042 - L2 LINE L2 -479 2835 2724 6424 32 4 3 chr5 40198559 40199329 -159430821 + L1PA5 LINE L1 5383 6153 -1 21 0 0 0 chr5 40199653 40199674 -159430476 + AT_rich Low_complexity Low_complexity 1 21 0 194 193 18 0 chr5 40200828 40200885 -159429265 + (TA)n Simple_repeat Simple_repeat 2 59 0 4677 188 48 14 chr5 40201390 40202978 -159427172 - L1MB7 LINE L1 -38 6146 4613 1776 151 10 10 chr5 40202978 40203277 -159426873 - AluSx SINE Alu -13 299 1 4677 188 48 14 chr5 40203277 40203387 -159426763 - L1MB7 LINE L1 -1571 4613 4508 2172 116 0 3 chr5 40203387 40203679 -159426471 - AluSg SINE Alu -19 291 1 4677 188 48 14 chr5 40203679 40203798 -159426352 - L1MB7 LINE L1 -1676 4508 4265 208 250 0 19 chr5 40204262 40204314 -159425836 + GA-rich Low_complexity Low_complexity 4 54 0 317 258 41 41 chr5 40204792 40204889 -159425261 - MIR SINE MIR -131 131 35 2241 101 10 0 chr5 40204889 40205185 -159424965 - AluSp SINE Alu -13 300 2 371 252 98 35 chr5 40206433 40206507 -159423643 - MIR SINE MIR -21 241 173 976 227 147 3 chr5 40206507 40206807 -159423343 - MER2 DNA MER2_type -1 343 1 371 252 98 35 chr5 40206807 40206875 -159423275 - MIR SINE MIR -89 173 90 272 319 53 11 chr5 40206950 40207044 -159423106 + L2 LINE L2 3151 3248 -24 221 0 35 0 chr5 40207044 40207073 -159423077 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 334 353 17 92 chr5 40207161 40207319 -159422831 + L2 LINE L2 2936 3054 -218 6462 181 18 24 chr5 40207319 40207876 -159422274 - L1PA15 LINE L1 -2 6163 5604 2303 107 3 0 chr5 40207876 40208184 -159421966 - AluSp SINE Alu -4 309 1 6462 181 18 24 chr5 40208184 40209806 -159420344 - L1PA15 LINE L1 -561 5604 3990 334 353 17 92 chr5 40209806 40210007 -159420143 + L2 LINE L2 3053 3268 -4 2081 107 3 7 chr5 40210564 40210854 -159419296 + AluSg SINE Alu 1 289 -21 1570 231 95 54 chr5 40210859 40211374 -159418776 - MLT1F1 LTR MaLR -6 561 1 252 0 0 0 chr5 40211459 40211487 -159418663 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 2473 65 3 7 chr5 40212113 40212419 -159417731 - AluY SINE Alu -6 305 1 368 239 15 4 chr5 40213504 40213590 -159416560 - MER5A DNA MER1_type -81 106 12 25 0 0 0 chr5 40213814 40213839 -159416311 + AT_rich Low_complexity Low_complexity 1 25 0 364 246 82 41 chr5 40215803 40215974 -159414176 + L1ME LINE L1 5551 5728 -393 2186 115 0 0 chr5 40216170 40216465 -159413685 + AluSc SINE Alu 1 295 -14 263 302 44 137 chr5 40217755 40218070 -159412080 + L2 LINE L2 2977 3262 -10 510 361 108 24 chr5 40218247 40218832 -159411318 - L2 LINE L2 -466 2848 2215 2185 88 14 3 chr5 40218880 40219176 -159410974 - AluSx SINE Alu -11 301 3 933 193 181 40 chr5 40219291 40219695 -159410455 + L1MC4 LINE L1 7480 7940 -102 1476 173 61 17 chr5 40219756 40220051 -159410099 - AluJo SINE Alu -4 308 1 289 280 29 115 chr5 40220300 40220579 -159409571 - MLT1I LTR MaLR -50 359 105 2016 127 87 0 chr5 40220755 40221087 -159409063 + MER46B DNA MER2_type 1 236 0 27 43 5 0 chr5 40221323 40221408 -159408742 + AT_rich Low_complexity Low_complexity 1 48 0 23 33 0 0 chr5 40221645 40221675 -159408475 + AT_rich Low_complexity Low_complexity 1 30 0 10637 42 9 35 chr5 40222882 40225560 -159404590 - L1PA5 LINE L1 -3 6151 3528 653 218 0 0 chr5 40225786 40225910 -159404240 - FLAM_A SINE Alu -5 128 5 318 216 21 21 chr5 40226700 40226797 -159403353 - MER113 DNA MER1_type? -393 128 32 2259 99 0 3 chr5 40228300 40228604 -159401546 - AluSx SINE Alu -9 303 1 1944 106 0 62 chr5 40229423 40229743 -159400407 + AluSc SINE Alu 1 300 -9 30 59 0 0 chr5 40230637 40230688 -159399462 + AT_rich Low_complexity Low_complexity 1 51 0 444 267 37 14 chr5 40230809 40230930 -159399220 + MIR SINE MIR 8 128 -80 274 242 132 22 chr5 40230953 40231044 -159399106 + L2 LINE L2 3211 3311 -2 194 352 22 22 chr5 40231039 40231130 -159399020 + MIR SINE MIR 151 241 -21 * 200 219 0 24 chr5 40231529 40231570 -159398580 + L2 LINE L2 3215 3254 -18 471 259 57 63 chr5 40231667 40231689 -159398461 - MIR SINE MIR -56 206 185 2094 105 10 0 chr5 40231689 40231983 -159398167 - AluSq SINE Alu -16 297 1 471 259 57 63 chr5 40231983 40232118 -159398032 - MIR SINE MIR -77 185 50 1909 251 69 28 chr5 40232625 40233136 -159397014 - MLT1H1 LTR MaLR 0 555 20 522 125 0 0 chr5 40233136 40233224 -159396926 - L1MA3 LINE L1 0 6305 6218 1909 251 69 28 chr5 40233224 40233245 -159396905 - MLT1H1 LTR MaLR -535 20 1 1648 220 222 10 chr5 40233757 40234275 -159395875 - L2 LINE L2 -513 2801 2174 675 126 45 0 chr5 40234290 40234401 -159395749 - AluSq/x SINE Alu -196 116 1 539 239 172 18 chr5 40234459 40234622 -159395528 + MIR3 SINE MIR 14 201 -7 2818 228 93 13 chr5 40234974 40235733 -159394417 - L1ME1 LINE L1 -6 6160 5341 * 8767 232 92 29 chr5 40235731 40237733 -159392417 - L1MDa LINE L1 -743 5472 3203 1791 181 3 0 chr5 40237733 40238036 -159392114 - AluJb SINE Alu -8 304 1 8767 232 92 29 chr5 40238036 40239155 -159390995 - L1MDa LINE L1 -3012 3203 2156 880 184 12 6 chr5 40239196 40239359 -159390791 - FAM SINE Alu -2 47 1 294 211 13 13 chr5 40239423 40239499 -159390651 - L1MDa LINE L1 -4301 2095 2020 25 0 0 0 chr5 40240030 40240055 -159390095 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 40240670 40240694 -159389456 + AT_rich Low_complexity Low_complexity 1 24 0 1052 228 216 15 chr5 40241390 40241714 -159388436 + L2 LINE L2 974 1362 -1952 495 282 121 29 chr5 40241761 40241967 -159388183 + L2 LINE L2 1818 2042 -1272 1185 222 80 44 chr5 40242055 40242443 -159387707 - MLT1C LTR MaLR 0 467 66 447 244 113 48 chr5 40242514 40242681 -159387469 - L1MC4a LINE L1 -1485 6323 6136 1813 141 60 15 chr5 40242681 40243014 -159387136 + MER7A DNA MER2_type 1 346 0 447 244 113 48 chr5 40243014 40243076 -159387074 - L1MC4a LINE L1 -1672 6136 6079 351 241 35 17 chr5 40243191 40243307 -159386843 + MIR SINE MIR 118 235 -27 227 329 110 14 chr5 40244326 40244399 -159385751 - MER5A DNA MER1_type -19 170 91 321 224 56 9 chr5 40244826 40244933 -159385217 + L1MC4 LINE L1 7929 8040 -2 2230 228 71 34 chr5 40245092 40245428 -159384722 - L1MD2 LINE L1 -1 6358 6036 1657 194 17 0 chr5 40245428 40245717 -159384433 - AluJb SINE Alu -18 294 1 2230 228 71 34 chr5 40245717 40246000 -159384150 - L1MD2 LINE L1 -323 6036 5707 2066 154 62 31 chr5 40246000 40246384 -159383766 - MSTD LTR MaLR 0 396 1 2230 228 71 34 chr5 40246384 40246470 -159383680 - L1MD2 LINE L1 -652 5707 5626 619 211 83 19 chr5 40247130 40247286 -159382864 + MIR SINE MIR 90 255 -7 296 273 121 10 chr5 40247360 40247459 -159382691 + L2 LINE L2 3141 3250 -22 23 0 0 0 chr5 40248183 40248206 -159381944 + AT_rich Low_complexity Low_complexity 1 23 0 2158 119 3 0 chr5 40248570 40248880 -159381270 + AluSx SINE Alu 1 311 -1 1944 130 20 3 chr5 40248880 40249173 -159380977 + AluSx SINE Alu 1 298 -14 284 358 58 0 chr5 40249275 40249395 -159380755 + L3 LINE CR1 845 971 -606 448 211 13 0 chr5 40249502 40249578 -159380572 + MER2 DNA MER2_type 269 345 0 1157 257 64 18 chr5 40249579 40250019 -159380131 + L1M4 LINE L1 4252 4711 -1435 1513 241 151 50 chr5 40250024 40250718 -159379432 - L2 LINE L2 -1001 2313 1550 23 0 0 0 chr5 40250977 40251000 -159379150 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 40251589 40251610 -159378540 + AT_rich Low_complexity Low_complexity 1 21 0 397 237 9 130 chr5 40252758 40252973 -159377177 + LTR41 LTR ERVL 552 740 -33 253 235 0 15 chr5 40252982 40253050 -159377100 + L1MC4 LINE L1 6648 6714 -1328 235 311 94 9 chr5 40253165 40253271 -159376879 + MIR SINE MIR 1 115 -147 300 364 38 3 chr5 40253373 40253498 -159376652 + MIR SINE MIR 40 177 -31 310 318 58 29 chr5 40253584 40253757 -159376393 + L2 LINE L2 2175 2352 -962 279 247 62 62 chr5 40254586 40254683 -159375467 + L2 LINE L2 3169 3265 -7 701 234 102 15 chr5 40255473 40255670 -159374480 - MIR SINE MIR -12 250 37 463 200 158 61 chr5 40255803 40255968 -159374182 + MIR SINE MIR 38 218 -44 466 269 102 23 chr5 40255978 40256194 -159373956 - L1ME LINE L1 -385 5736 5504 278 302 16 32 chr5 40256754 40256880 -159373270 - MIR SINE MIR -14 248 125 372 164 0 0 chr5 40258443 40258510 -159371640 + (TG)n Simple_repeat Simple_repeat 2 68 0 664 291 145 0 chr5 40259703 40259930 -159370220 + MIR SINE MIR 2 261 -1 2208 63 7 40 chr5 40262366 40262666 -159367484 + AluSc SINE Alu 3 292 -17 23 0 0 0 chr5 40262791 40262814 -159367336 + AT_rich Low_complexity Low_complexity 1 23 0 2363 106 0 0 chr5 40263044 40263355 -159366795 - AluSx SINE Alu -1 311 1 2347 94 0 0 chr5 40264131 40264430 -159365720 + AluSq SINE Alu 1 299 -14 24 0 0 0 chr5 40265134 40265158 -159364992 + AT_rich Low_complexity Low_complexity 1 24 0 1924 149 3 3 chr5 40265353 40265661 -159364489 + AluJb SINE Alu 1 308 -4 887 127 7 14 chr5 40266379 40266521 -159363629 + FLAM_C SINE Alu 1 141 -2 246 323 115 31 chr5 40266953 40267049 -159363101 - L3 LINE CR1 -34 1543 1440 23 0 0 0 chr5 40267299 40267322 -159362828 + AT_rich Low_complexity Low_complexity 1 23 0 374 332 71 58 chr5 40267345 40267640 -159362510 + L3 LINE CR1 1263 1561 -16 24 0 0 0 chr5 40267669 40267693 -159362457 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 40268765 40268788 -159361362 + AT_rich Low_complexity Low_complexity 1 23 0 1766 163 42 9 chr5 40269061 40269393 -159360757 - MER2 DNA MER2_type 0 344 2 1588 189 50 0 chr5 40269948 40270228 -159359922 + AluJb SINE Alu 1 294 -18 5217 181 53 9 chr5 40270602 40272241 -159357909 + L1MA4 LINE L1 4554 6296 -4 353 292 102 31 chr5 40272545 40273137 -159357013 - L1MC5 LINE L1 -350 7611 7146 24 91 0 0 chr5 40273387 40273453 -159356697 + AT_rich Low_complexity Low_complexity 1 66 0 319 250 69 94 chr5 40273543 40273703 -159356447 + L1MC/D LINE L1 5317 5472 -2336 350 260 39 55 chr5 40273868 40274049 -159356101 + L1ME LINE L1 3545 3722 -2424 435 221 0 0 chr5 40274122 40274208 -159355942 - FLAM_A SINE Alu -10 132 47 1815 156 29 16 chr5 40274246 40274554 -159355596 + AluJb SINE Alu 1 312 0 1685 95 68 4 chr5 40274748 40275000 -159355150 + AluY SINE Alu 33 300 -11 700 227 0 0 chr5 40275008 40275136 -159355014 + FLAM_A SINE Alu 1 128 -5 1167 286 101 20 chr5 40275158 40276079 -159354071 + L1ME LINE L1 4034 5045 -1101 694 276 161 10 chr5 40276110 40276501 -159353649 + L1ME LINE L1 5352 5801 -361 1635 177 33 13 chr5 40276532 40276831 -159353319 + AluJo SINE Alu 3 307 -5 198 0 0 0 chr5 40276839 40276861 -159353289 + (TA)n Simple_repeat Simple_repeat 1 22 0 635 161 131 8 chr5 40277663 40277793 -159352357 + MER58C DNA MER1_type 70 215 0 21 36 0 0 chr5 40279756 40279784 -159350366 + AT_rich Low_complexity Low_complexity 1 28 0 2020 69 0 42 chr5 40279784 40279897 -159350253 - L1PA8 LINE L1 -4 6168 6052 2387 76 0 10 chr5 40279897 40280201 -159349949 - AluSg SINE Alu -9 301 1 2020 69 0 42 chr5 40280201 40280376 -159349774 - L1PA8 LINE L1 -120 6052 5892 405 285 145 35 chr5 40280859 40281059 -159349091 + MIR SINE MIR 9 230 -32 206 294 156 28 chr5 40281993 40282102 -159348048 + MIR3 SINE MIR 45 167 -41 5624 173 23 6 chr5 40284033 40286045 -159344105 - L1PA16 LINE L1 -1 6165 4126 2059 171 3 3 chr5 40286861 40287205 -159342945 + MER7A DNA MER2_type 2 343 -3 833 115 0 23 chr5 40293478 40293608 -159336542 - FLAM_C SINE Alu -2 131 5 464 173 333 0 chr5 40293742 40293898 -159336252 - MER3 DNA MER1_type -1 208 1 186 240 0 0 chr5 40294758 40294808 -159335342 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 214 358 15 0 chr5 40295419 40295486 -159334664 + L2 LINE L2 3200 3267 -5 2005 121 0 4 chr5 40296016 40296296 -159333854 + AluSx SINE Alu 29 307 -5 22 35 0 0 chr5 40297416 40297445 -159332705 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 40298179 40298214 -159331936 + AT_rich Low_complexity Low_complexity 1 35 0 696 215 8 0 chr5 40298953 40299083 -159331067 - FRAM SINE Alu -17 159 29 2253 71 4 0 chr5 40299144 40299466 -159330684 - AluY SINE Alu 0 323 1 205 205 0 0 chr5 40301843 40301882 -159328268 + (TA)n Simple_repeat Simple_repeat 2 40 0 742 256 82 85 chr5 40302473 40302766 -159327384 - L2 LINE L2 -4 3268 2977 869 107 0 0 chr5 40304963 40305075 -159325075 + FLAM_C SINE Alu 6 117 -26 394 309 94 39 chr5 40305861 40306042 -159324108 - MER117 DNA MER1_type 0 197 7 402 328 30 30 chr5 40308010 40308144 -159322006 - L2 LINE L2 -1 3312 3179 827 283 58 37 chr5 40308424 40308889 -159321261 - LTR33 LTR ERVL 0 521 6 396 244 0 12 chr5 40309833 40309915 -159320235 + Tigger7 DNA MER2_type 2 82 -257 * 908 161 124 5 chr5 40309912 40310105 -159320045 + Tigger7 DNA MER2_type 2272 2487 0 460 165 66 0 chr5 40310501 40310592 -159319558 + MIR SINE MIR 156 252 -10 1355 221 0 34 chr5 40310815 40311137 -159319013 - AluJo SINE Alu -1 311 1 301 145 32 0 chr5 40311160 40311222 -159318928 - L1ME4a LINE L1 -8 6113 6050 1421 106 60 0 chr5 40311402 40311619 -159318531 - MER30 DNA MER1_type 0 230 1 26 0 0 0 chr5 40311663 40311689 -159318461 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr5 40315237 40315260 -159314890 + AT_rich Low_complexity Low_complexity 1 23 0 835 241 68 14 chr5 40315366 40315573 -159314577 - MER20 DNA MER1_type 0 219 2 2267 77 27 0 chr5 40316736 40317033 -159313117 - AluSg SINE Alu -5 305 1 253 347 63 50 chr5 40317084 40317290 -159312860 + MIR SINE MIR 23 232 -30 850 199 13 0 chr5 40317292 40317443 -159312707 + MER46A DNA MER2_type 1 153 -83 25 31 0 0 chr5 40317667 40317699 -159312451 + AT_rich Low_complexity Low_complexity 1 32 0 1559 195 7 3 chr5 40317704 40317986 -159312164 + AluJb SINE Alu 4 286 -26 233 265 0 20 chr5 40318451 40318553 -159311597 - L1M LINE L1 -2380 5428 5329 1246 136 5 0 chr5 40318567 40318758 -159311392 - AluJb SINE Alu -1 311 120 6284 53 10 82 chr5 40318889 40320684 -159309466 - SVA Other Other -683 1386 1 215 294 0 0 chr5 40321301 40321352 -159308798 + MIR3 SINE MIR 107 157 -51 2273 93 0 7 chr5 40321550 40321851 -159308299 - AluSp SINE Alu -14 299 1 2071 120 10 3 chr5 40321880 40322172 -159307978 + AluSg SINE Alu 1 294 -16 22 35 0 0 chr5 40323329 40323358 -159306792 + AT_rich Low_complexity Low_complexity 1 29 0 24 67 0 0 chr5 40323844 40323889 -159306261 + AT_rich Low_complexity Low_complexity 1 45 0 1016 189 6 108 chr5 40324201 40324452 -159305698 - L1MD3 LINE L1 0 8038 7849 547 168 112 148 chr5 40324452 40324648 -159305502 + MER5A DNA MER1_type 1 189 0 1016 189 6 108 chr5 40324648 40324750 -159305400 - L1MD3 LINE L1 -189 7849 7738 1203 224 47 4 chr5 40324772 40325027 -159305123 - L1MC4 LINE L1 -1014 7028 6763 1936 126 60 0 chr5 40325266 40325551 -159304599 + AluSx SINE Alu 1 302 -10 26 30 0 0 chr5 40326180 40326213 -159303937 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr5 40326313 40326334 -159303816 + AT_rich Low_complexity Low_complexity 1 21 0 2352 94 0 0 chr5 40327445 40327743 -159302407 + AluSq SINE Alu 1 298 -15 2010 95 4 0 chr5 40327855 40328119 -159302031 + AluY SINE Alu 27 291 -20 21 57 0 0 chr5 40328418 40328453 -159301697 + AT_rich Low_complexity Low_complexity 1 35 0 203 133 0 0 chr5 40329139 40329169 -159300981 + (TATG)n Simple_repeat Simple_repeat 3 32 0 444 289 132 56 chr5 40329890 40330312 -159299838 - L1MC5 LINE L1 -151 7810 7345 2124 121 3 3 chr5 40330312 40330610 -159299540 + AluSq SINE Alu 1 298 -15 444 289 132 56 chr5 40330610 40330672 -159299478 - L1MC5 LINE L1 -616 7345 7289 212 266 31 0 chr5 40330691 40330755 -159299395 - MIR SINE MIR -22 240 175 1474 190 7 69 chr5 40331380 40331685 -159298465 + AluJo SINE Alu 3 288 -24 22 80 0 0 chr5 40331760 40331810 -159298340 + AT_rich Low_complexity Low_complexity 1 50 0 2223 164 26 7 chr5 40331817 40332245 -159297905 + L1MA4 LINE L1 5864 6299 -1 21 57 0 0 chr5 40332272 40332307 -159297843 + AT_rich Low_complexity Low_complexity 1 35 0 766 200 28 56 chr5 40333178 40333358 -159296792 + FAM SINE Alu 1 175 0 2311 96 0 25 chr5 40334033 40334347 -159295803 - AluSx SINE Alu -6 306 1 797 201 137 97 chr5 40334648 40334762 -159295388 - L1MC5 LINE L1 -99 7862 7754 2251 104 3 13 chr5 40334762 40335070 -159295080 - AluSx SINE Alu -7 305 1 797 201 137 97 chr5 40335070 40335585 -159294565 - L1MC5 LINE L1 -207 7754 7238 * 2225 207 108 16 chr5 40335579 40336192 -159293958 - L1ME1 LINE L1 -58 6108 5440 1101 197 0 24 chr5 40337191 40337404 -159292746 - AluJb SINE Alu -18 294 87 2337 86 0 7 chr5 40337415 40337716 -159292434 - AluSq SINE Alu -14 299 1 1247 239 20 7 chr5 40338129 40338434 -159291716 + L1ME2 LINE L1 5745 6053 -111 377 260 75 34 chr5 40338434 40338580 -159291570 - MER5A DNA MER1_type -1 188 37 * 753 233 0 13 chr5 40338450 40338600 -159291550 + MER5A DNA MER1_type 37 184 -5 419 216 9 17 chr5 40338600 40338716 -159291434 + L1ME2 LINE L1 6040 6154 -10 500 135 0 11 chr5 40338785 40338874 -159291276 + (TG)n Simple_repeat Simple_repeat 2 89 0 1389 233 0 17 chr5 40338912 40339200 -159290950 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr5 40339655 40339676 -159290474 + AT_rich Low_complexity Low_complexity 1 21 0 518 231 148 73 chr5 40339676 40340075 -159290075 + L1ME3A LINE L1 4632 5060 -1086 263 176 0 29 chr5 40340089 40340157 -159289993 - L1MC4 LINE L1 -1339 6703 6638 849 149 8 15 chr5 40340164 40340298 -159289852 - FLAM_A SINE Alu 0 133 1 666 272 106 56 chr5 40340361 40341102 -159289048 + L1ME3A LINE L1 5171 5950 -220 1553 161 79 0 chr5 40341439 40341706 -159288444 + AluJb SINE Alu 1 288 -24 650 223 14 47 chr5 40341922 40342133 -159288017 - MER3 DNA MER1_type -1 208 5 22 0 0 0 chr5 40342427 40342449 -159287701 + AT_rich Low_complexity Low_complexity 1 22 0 24 67 0 0 chr5 40342600 40342645 -159287505 + AT_rich Low_complexity Low_complexity 1 45 0 318 50 0 0 chr5 40342767 40342807 -159287343 + (TA)n Simple_repeat Simple_repeat 1 40 0 25 83 0 0 chr5 40343306 40343366 -159286784 + AT_rich Low_complexity Low_complexity 1 60 0 23 86 0 0 chr5 40343397 40343455 -159286695 + AT_rich Low_complexity Low_complexity 1 58 0 2287 79 0 7 chr5 40343535 40343825 -159286325 + AluY SINE Alu 1 288 -23 375 98 0 0 chr5 40343825 40343886 -159286264 + (TA)n Simple_repeat Simple_repeat 1 61 0 238 286 0 0 chr5 40344056 40344126 -159286024 + T-rich Low_complexity Low_complexity 1 70 0 1825 180 3 3 chr5 40344413 40344718 -159285432 - AluJo SINE Alu -7 305 1 27 0 0 0 chr5 40345507 40345534 -159284616 + AT_rich Low_complexity Low_complexity 1 27 0 50 31 0 0 chr5 40345711 40345775 -159284375 + AT_rich Low_complexity Low_complexity 1 64 0 407 233 133 8 chr5 40345907 40346027 -159284123 - MIR SINE MIR -30 232 98 703 279 116 0 chr5 40346351 40346566 -159283584 - MIR SINE MIR 0 262 23 350 220 85 75 chr5 40346971 40347171 -159282979 - L1ME LINE L1 -303 5818 5617 287 241 63 49 chr5 40347266 40347497 -159282653 - L1ME LINE L1 -753 5489 5255 2282 103 0 10 chr5 40347685 40347997 -159282153 - AluSg SINE Alu -1 309 1 1856 158 3 7 chr5 40347999 40348296 -159281854 - AluSx SINE Alu -16 296 1 618 35 35 0 chr5 40348586 40348673 -159281477 + AluSg SINE Alu 1 90 -220 1008 108 13 6 chr5 40348777 40348934 -159281216 + THE1C-int LTR MaLR 1423 1580 0 2134 116 42 53 chr5 40348934 40349087 -159281063 + THE1C LTR MaLR 1 154 -221 2151 120 7 0 chr5 40349087 40349386 -159280764 - AluSc SINE Alu -8 301 1 2134 116 42 53 chr5 40349386 40349611 -159280539 + THE1C LTR MaLR 154 375 0 8739 204 88 25 chr5 40349611 40349846 -159280304 + L1 LINE L1 2775 2994 -3161 2313 94 10 0 chr5 40349846 40350144 -159280006 + AluSp SINE Alu 1 301 -12 8739 204 88 25 chr5 40350144 40351401 -159278749 + L1 LINE L1 2994 4170 -1985 306 50 0 0 chr5 40351401 40351441 -159278709 + (CA)n Simple_repeat Simple_repeat 2 41 0 8739 204 88 25 chr5 40351441 40352292 -159277858 + L1 LINE L1 4170 5295 -860 2553 45 0 10 chr5 40352292 40352603 -159277547 + AluY SINE Alu 1 308 -3 8739 204 88 25 chr5 40352603 40352694 -159277456 + L1 LINE L1 5295 5379 -776 804 174 8 0 chr5 40352985 40353106 -159277044 + FLAM_C SINE Alu 3 124 -19 2200 96 0 7 chr5 40353111 40353404 -159276746 + AluSg SINE Alu 1 291 -19 21 36 0 0 chr5 40353404 40353432 -159276718 + AT_rich Low_complexity Low_complexity 1 28 0 6126 86 26 8 chr5 40354553 40355531 -159274619 - L1PB1 LINE L1 -7 6144 5150 1685 151 13 7 chr5 40355634 40355932 -159274218 + AluSx SINE Alu 1 300 -12 186 279 82 33 chr5 40356519 40356580 -159273570 - MIR SINE MIR -152 110 47 2166 115 10 3 chr5 40356603 40356908 -159273242 - AluSc SINE Alu -2 307 1 1576 165 0 84 chr5 40357020 40357221 -159272929 + AluJb SINE Alu 1 167 -145 2107 145 0 3 chr5 40357221 40357531 -159272619 + AluSx SINE Alu 3 311 -1 1576 165 0 84 chr5 40357531 40357651 -159272499 + AluJb SINE Alu 167 295 -17 1642 144 26 46 chr5 40359132 40359438 -159270712 + AluJo SINE Alu 1 300 -12 666 220 43 0 chr5 40359549 40359690 -159270460 + MIR SINE MIR 29 175 -87 2327 86 0 13 chr5 40359733 40360037 -159270113 - AluSc SINE Alu -9 300 1 2261 95 3 16 chr5 40360414 40360720 -159269430 + AluSp SINE Alu 1 302 -11 2445 69 0 7 chr5 40360729 40361033 -159269117 + AluY SINE Alu 1 302 -9 814 207 12 6 chr5 40361449 40361618 -159268532 + FAM SINE Alu 1 170 -5 1368 65 0 6 chr5 40362907 40363076 -159267074 - AluSq SINE Alu -15 298 131 573 103 4 1 chr5 40363697 40363931 -159266219 + AluSx SINE Alu 41 305 -5 1263 192 92 37 chr5 40364580 40364851 -159265299 - AluJo SINE Alu -16 286 1 315 141 0 0 chr5 40364952 40365016 -159265134 + (CA)n Simple_repeat Simple_repeat 2 65 0 1506 175 4 18 chr5 40365550 40365830 -159264320 - AluJo SINE Alu -1 311 36 698 87 10 0 chr5 40366792 40366895 -159263255 - L1MA2 LINE L1 0 6304 6201 1054 290 53 35 chr5 40366946 40366967 -159263183 + LTR16B LTR ERVL 23 42 -422 1695 169 17 14 chr5 40366967 40367263 -159262887 + AluJb SINE Alu 1 297 -15 1054 290 53 35 chr5 40367263 40367675 -159262475 + LTR16B LTR ERVL 42 464 0 570 222 86 0 chr5 40367727 40367844 -159262306 + FLAM_A SINE Alu 1 127 -6 1806 205 116 0 chr5 40367941 40368302 -159261848 + MER68 LTR ERV1 160 562 0 321 248 81 60 chr5 40368302 40368447 -159261703 + LTR16B LTR ERVL 317 464 0 2378 90 10 6 chr5 40368515 40368827 -159261323 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 40368840 40368864 -159261286 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1188 182 5 5 chr5 40368871 40369074 -159261076 + AluJb SINE Alu 103 305 -7 22 56 0 0 chr5 40369124 40369160 -159260990 + AT_rich Low_complexity Low_complexity 1 36 0 317 120 0 0 chr5 40369177 40369227 -159260923 - AluJo SINE Alu -161 141 92 739 199 150 34 chr5 40369470 40369590 -159260560 + L1P LINE L1 4467 4572 -1574 1899 132 41 7 chr5 40369590 40369885 -159260265 + AluSx SINE Alu 5 309 -3 739 199 150 34 chr5 40369885 40370031 -159260119 + L1P LINE L1 4572 4764 -1382 9729 105 47 4 chr5 40370133 40371531 -159258619 - THE1C-int LTR MaLR -123 1457 1 2501 114 8 16 chr5 40371531 40371909 -159258241 - THE1C LTR MaLR 0 375 1 1795 243 19 4 chr5 40371932 40372393 -159257757 - L1 LINE L1 -3380 2766 2299 23 33 0 0 chr5 40373378 40373408 -159256742 + AT_rich Low_complexity Low_complexity 1 30 0 1682 179 11 0 chr5 40373570 40373855 -159256295 - AluJo SINE Alu -24 288 1 1005 97 21 0 chr5 40374822 40374967 -159255183 - MER30 DNA MER1_type -74 156 9 845 186 0 7 chr5 40375344 40375489 -159254661 + AluSg/x SINE Alu 146 289 -21 890 194 63 40 chr5 40375496 40375655 -159254495 + MER2 DNA MER2_type 81 250 -95 2304 69 21 3 chr5 40375655 40375946 -159254204 - AluSq SINE Alu -17 296 1 890 194 63 40 chr5 40375946 40376039 -159254111 + MER2 DNA MER2_type 250 339 -6 771 160 76 105 chr5 40376261 40376448 -159253702 + L1MB4 LINE L1 5950 6130 -50 1831 178 0 10 chr5 40376448 40376752 -159253398 + AluJb SINE Alu 1 301 -11 771 160 76 105 chr5 40376752 40376802 -159253348 + L1MB4 LINE L1 6130 6180 0 25 31 0 0 chr5 40376838 40376870 -159253280 + AT_rich Low_complexity Low_complexity 1 32 0 549 217 104 0 chr5 40376881 40376987 -159253163 + AluSq/x SINE Alu 4 120 -193 25 51 0 0 chr5 40377114 40377153 -159252997 + AT_rich Low_complexity Low_complexity 1 39 0 913 232 32 0 chr5 40377289 40377474 -159252676 + MER58A DNA MER1_type 33 223 -1 216 0 0 0 chr5 40380364 40380388 -159249762 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 279 240 115 10 chr5 40380569 40380665 -159249485 - MIR SINE MIR -71 191 86 2458 64 3 0 chr5 40380917 40381215 -159248935 + AluSp SINE Alu 1 299 -14 24 53 0 0 chr5 40382508 40382546 -159247604 + AT_rich Low_complexity Low_complexity 1 38 0 325 274 52 7 chr5 40382554 40382689 -159247461 - L1MC5 LINE L1 -89 7872 7732 2481 66 10 0 chr5 40382697 40382999 -159247151 - AluY SINE Alu -6 305 1 2391 75 0 3 chr5 40383192 40383487 -159246663 + AluSg SINE Alu 1 294 -16 275 340 39 0 chr5 40384430 40384533 -159245617 - MIR SINE MIR -68 140 34 182 315 108 23 chr5 40385365 40385495 -159244655 - L2 LINE L2 -956 2358 2218 194 280 0 20 chr5 40385731 40385781 -159244369 - L2 LINE L2 -2100 1214 1166 195 311 184 10 chr5 40385850 40386056 -159244094 - L2 LINE L2 -2341 973 732 223 209 0 0 chr5 40386151 40386194 -159243956 - L2 LINE L2 0 3313 3271 1693 161 75 11 chr5 40386481 40386761 -159243389 + AluJb SINE Alu 1 298 -14 230 301 217 63 chr5 40386845 40387241 -159242909 - L2 LINE L2 -341 2973 2517 377 214 201 56 chr5 40387603 40387926 -159242224 - HAL1 LINE L1 -59 2448 2079 1040 250 140 14 chr5 40388048 40388492 -159241658 - HAL1 LINE L1 -634 1873 1374 725 186 0 0 chr5 40388508 40388626 -159241524 + FLAM_C SINE Alu 1 118 -25 236 261 121 45 chr5 40388648 40389004 -159241146 - HAL1 LINE L1 -1138 1369 987 2111 104 4 4 chr5 40389036 40389342 -159240808 + AluSc SINE Alu 1 306 0 1922 143 6 37 chr5 40389774 40390096 -159240054 + AluJo SINE Alu 1 312 0 2081 136 48 0 chr5 40390128 40390423 -159239727 - AluSx SINE Alu -2 310 2 322 357 80 28 chr5 40390512 40390725 -159239425 - HAL1 LINE L1 -1511 996 773 643 187 161 7 chr5 40390748 40390903 -159239247 - MER58A DNA MER1_type 0 224 46 348 307 57 80 chr5 40391193 40391369 -159238781 - HAL1 LINE L1 -2299 208 37 2204 140 0 7 chr5 40391419 40391727 -159238423 - AluJb SINE Alu -5 307 2 734 129 32 32 chr5 40391727 40391851 -159238299 - AluJo SINE Alu -177 135 12 5988 89 14 2 chr5 40391861 40393183 -159236967 - L1PA11 LINE L1 -1 6173 4836 22 56 0 0 chr5 40393739 40393775 -159236375 + AT_rich Low_complexity Low_complexity 1 36 0 427 343 42 15 chr5 40393903 40394235 -159235915 + L1MEc LINE L1 207 547 -6016 395 177 204 26 chr5 40394836 40394853 -159235297 + L1MEc LINE L1 799 812 -5472 479 196 137 10 chr5 40394853 40394979 -159235171 + FLAM_C SINE Alu 2 140 0 395 177 204 26 chr5 40394979 40395133 -159235017 + L1MEc LINE L1 812 989 -5295 2184 104 0 27 chr5 40395139 40395437 -159234713 - AluSx SINE Alu -22 290 1 513 250 3 35 chr5 40395452 40395670 -159234480 + L1MEc LINE L1 1275 1448 -4832 804 104 16 6 chr5 40395673 40395923 -159234227 + AluSx SINE Alu 1 294 -15 316 266 53 4 chr5 40395931 40396085 -159234065 + L1MEc LINE L1 1641 1759 -4623 1236 186 55 6 chr5 40396090 40396402 -159233748 + L1 LINE L1 4575 4901 -1245 535 98 0 0 chr5 40396402 40396484 -159233666 - LTR9B LTR ERV1 -562 82 1 698 143 39 77 chr5 40396485 40396667 -159233483 + L1MEc LINE L1 2453 2627 -3755 671 254 11 0 chr5 40396683 40396872 -159233278 + L1PBa LINE L1 7 197 -6666 * 7581 143 35 14 chr5 40396869 40398312 -159231838 + L1PBa LINE L1 1392 2875 -3987 2121 96 32 7 chr5 40398312 40398593 -159231557 + AluSg SINE Alu 1 288 -22 7581 143 35 14 chr5 40398593 40398812 -159231338 + L1PBa LINE L1 2875 3088 -3774 2342 166 11 9 chr5 40399742 40400200 -159229950 + L1MEc LINE L1 2598 3056 -3326 2011 183 81 33 chr5 40400200 40400682 -159229468 + LTR22 LTR ERVK 1 505 -4 3467 132 34 7 chr5 40400687 40401276 -159228874 + HERVK22 LTR ERVK 1 605 -6232 2445 65 0 0 chr5 40401277 40401568 -159228582 - AluY SINE Alu -20 291 1 16773 91 10 0 chr5 40401570 40403936 -159226214 + HERVK22 LTR ERVK 694 3081 -3756 10198 113 16 14 chr5 40403946 40405586 -159224564 + HERVK22 LTR ERVK 3205 4847 -1990 18011 86 8 12 chr5 40405688 40408241 -159221909 + HERVK22 LTR ERVK 4294 6837 0 1882 179 80 66 chr5 40408241 40408739 -159221411 + LTR22 LTR ERVK 1 505 -4 10257 196 17 2 chr5 40408744 40411477 -159218673 + L1P5 LINE L1 3051 5822 -565 251 108 0 0 chr5 40411484 40411533 -159218617 + L1PBa LINE L1 3094 3142 -3720 781 141 0 63 chr5 40411542 40411684 -159218466 + FLAM_C SINE Alu 1 133 0 298 207 0 0 chr5 40411709 40411767 -159218383 + L1 LINE L1 3373 3430 -3432 1629 126 105 26 chr5 40411898 40412240 -159217910 + L1M1 LINE L1 2198 2566 -4283 2922 194 16 70 chr5 40412242 40412532 -159217618 + L1M1 LINE L1 2816 3120 -3728 2345 98 0 0 chr5 40412532 40412838 -159217312 + AluSg1 SINE Alu 1 306 -3 2922 194 16 70 chr5 40412838 40413539 -159216611 + L1M1 LINE L1 3120 3912 -2936 21083 143 32 14 chr5 40413549 40416611 -159213539 - L1PA11 LINE L1 -2 6172 2989 2144 145 0 0 chr5 40416611 40416921 -159213229 - AluSx SINE Alu -2 310 1 21083 143 32 14 chr5 40416921 40418748 -159211402 - L1PA11 LINE L1 -3185 2989 1197 2042 120 0 7 chr5 40418754 40419038 -159211112 + AluSx SINE Alu 6 287 -25 2023 110 0 57 chr5 40419057 40419357 -159210793 + AluSq SINE Alu 1 283 -30 2629 159 23 63 chr5 40419369 40419453 -159210697 + L1M1 LINE L1 5443 5529 -1473 1845 169 10 3 chr5 40419453 40419761 -159210389 + AluJb SINE Alu 1 310 -2 2629 159 23 63 chr5 40419761 40420767 -159209383 + L1M1 LINE L1 5529 6481 -521 1104 96 6 0 chr5 40420767 40420913 -159209237 + L1MA4 LINE L1 6127 6293 -7 977 175 142 12 chr5 40421017 40421257 -159208893 - Charlie1 DNA MER1_type -219 2542 2272 195 69 0 0 chr5 40422249 40422278 -159207872 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 216 86 0 0 chr5 40422635 40422670 -159207480 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 210 37 0 0 chr5 40422938 40422965 -159207185 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 877 258 322 13 chr5 40423869 40424096 -159206054 + L2 LINE L2 2174 2330 -984 2200 112 3 0 chr5 40424096 40424390 -159205760 - AluSx SINE Alu -17 295 1 877 258 322 13 chr5 40424390 40424764 -159205386 + L2 LINE L2 2330 2961 -353 22 35 0 0 chr5 40424889 40424918 -159205232 + AT_rich Low_complexity Low_complexity 1 29 0 233 245 0 0 chr5 40425051 40425100 -159205050 + L2 LINE L2 3261 3309 -4 * 488 208 31 0 chr5 40425099 40425195 -159204955 - MIR SINE MIR -76 186 88 2594 56 0 0 chr5 40425237 40425540 -159204610 - AluY SINE Alu -8 303 1 2457 58 0 19 chr5 40425551 40425859 -159204291 - AluY SINE Alu -9 302 1 2482 103 22 6 chr5 40427576 40427934 -159202216 + THE1B LTR MaLR 1 364 0 230 336 67 0 chr5 40428023 40428142 -159202008 + L1MEd LINE L1 895 1021 -5098 181 0 0 0 chr5 40428248 40428268 -159201882 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 2224 97 0 0 chr5 40428268 40428546 -159201604 - AluSc SINE Alu -1 297 1 380 281 33 8 chr5 40428602 40428723 -159201427 + MIR SINE MIR 139 262 0 208 241 84 60 chr5 40428743 40428826 -159201324 + MIR SINE MIR 92 176 -86 296 301 105 23 chr5 40428838 40428971 -159201179 - MIR SINE MIR -106 156 13 23 0 0 0 chr5 40429022 40429045 -159201105 + AT_rich Low_complexity Low_complexity 1 23 0 1095 138 0 0 chr5 40429053 40429212 -159200938 + AluSq SINE Alu 1 159 -154 2229 107 0 0 chr5 40429423 40429713 -159200437 + AluSg SINE Alu 1 290 -20 1557 139 35 116 chr5 40429778 40430123 -159200027 + AluYb8 SINE Alu 1 317 -1 288 77 0 0 chr5 40430155 40430194 -159199956 + (CA)n Simple_repeat Simple_repeat 2 40 0 1593 193 14 7 chr5 40430384 40430518 -159199632 + AluJo SINE Alu 1 133 -179 2247 102 0 7 chr5 40430518 40430822 -159199328 + AluSg1 SINE Alu 1 302 -7 1593 193 14 7 chr5 40430822 40430967 -159199183 + AluJo SINE Alu 133 282 -30 1135 150 55 59 chr5 40431037 40431257 -159198893 - MER20 DNA MER1_type 0 219 1 21 0 0 0 chr5 40431807 40431828 -159198322 + AT_rich Low_complexity Low_complexity 1 21 0 2237 92 7 7 chr5 40432339 40432631 -159197519 + AluSx SINE Alu 1 292 -20 306 289 0 13 chr5 40432995 40433071 -159197079 + MER5C DNA MER1_type 1 75 -249 382 286 49 2 chr5 40433590 40433723 -159196427 + MIR SINE MIR 17 154 -63 2010 135 55 0 chr5 40434180 40434506 -159195644 - MER2 DNA MER2_type 0 344 1 209 213 0 21 chr5 40434989 40435036 -159195114 + MIR SINE MIR 81 126 -136 30 0 0 0 chr5 40435248 40435278 -159194872 + AT_rich Low_complexity Low_complexity 1 30 0 826 225 14 38 chr5 40435315 40435524 -159194626 - MIR SINE MIR -56 206 3 38 51 0 0 chr5 40435686 40435745 -159194405 + AT_rich Low_complexity Low_complexity 1 59 0 285 51 0 0 chr5 40436210 40436249 -159193901 + (CA)n Simple_repeat Simple_repeat 2 40 0 214 286 0 48 chr5 40436971 40437055 -159193095 + MIR SINE MIR 119 198 -64 2060 117 3 51 chr5 40437452 40437768 -159192382 + AluSx SINE Alu 1 301 -11 1065 252 25 6 chr5 40437773 40438094 -159192056 - L1MC4 LINE L1 -27 8015 7689 1876 162 10 3 chr5 40438095 40438392 -159191758 - AluSx SINE Alu -9 303 5 523 204 142 37 chr5 40439363 40439525 -159190625 + MIR3 SINE MIR 29 207 -1 1641 149 33 33 chr5 40440273 40440358 -159189792 - MER44D DNA MER2_type -1883 608 524 1951 134 84 0 chr5 40440358 40440679 -159189471 - MER7A DNA MER2_type 0 346 1 1641 149 33 33 chr5 40440679 40440929 -159189221 - MER44D DNA MER2_type -1966 525 3 388 283 25 50 chr5 40441026 40441146 -159189004 - L2 LINE L2 0 3272 3156 2506 84 0 0 chr5 40441185 40441495 -159188655 + AluSg SINE Alu 1 310 0 2104 128 3 10 chr5 40442336 40442648 -159187502 + AluSx SINE Alu 1 310 -2 182 280 56 65 chr5 40442681 40442788 -159187362 - L2 LINE L2 -813 2501 2396 1084 185 43 56 chr5 40443004 40443236 -159186914 + AluJo SINE Alu 1 229 -83 186 291 93 0 chr5 40443251 40443337 -159186813 - L2 LINE L2 -1477 1837 1744 310 282 9 9 chr5 40444240 40444350 -159185800 + CT-rich Low_complexity Low_complexity 2 111 0 214 318 0 0 chr5 40445148 40445192 -159184958 + L2 LINE L2 3210 3253 -19 468 271 159 0 chr5 40445355 40445506 -159184644 + MER5A DNA MER1_type 9 183 -6 22 0 0 0 chr5 40445972 40445994 -159184156 + AT_rich Low_complexity Low_complexity 1 22 0 2243 111 0 0 chr5 40446495 40446783 -159183367 + AluSx SINE Alu 1 288 -24 266 210 16 0 chr5 40446853 40446915 -159183235 - L1ME LINE L1 -338 5828 5766 291 234 25 120 chr5 40447367 40447461 -159182689 - Charlie8 DNA MER1_type -137 204 129 1475 176 62 18 chr5 40447461 40447734 -159182416 - AluJo SINE Alu -27 285 1 291 234 25 120 chr5 40447734 40447797 -159182353 - Charlie8 DNA MER1_type -212 129 62 305 279 24 67 chr5 40447798 40447963 -159182187 - L2 LINE L2 -546 2768 2611 452 198 10 10 chr5 40448569 40448665 -159181485 + MER2 DNA MER2_type 2 97 -248 1264 159 0 5 chr5 40448666 40448867 -159181283 + AluJb SINE Alu 1 200 -112 442 174 18 55 chr5 40449036 40449145 -159181005 + FLAM_A SINE Alu 11 115 -27 14681 38 19 23 chr5 40449393 40452052 -159178098 + L1PA5 LINE L1 3528 6153 -1 21 0 0 0 chr5 40452376 40452397 -159177753 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr5 40454490 40454524 -159175626 + (CA)n Simple_repeat Simple_repeat 1 34 0 202 227 0 0 chr5 40454717 40454761 -159175389 + (CA)n Simple_repeat Simple_repeat 1 44 0 682 220 16 32 chr5 40506846 40507032 -159123118 - MER3 DNA MER1_type -26 183 1 22 0 0 0 chr5 40507322 40507344 -159122806 + AT_rich Low_complexity Low_complexity 1 22 0 24 67 0 0 chr5 40507495 40507540 -159122610 + AT_rich Low_complexity Low_complexity 1 45 0 336 48 0 0 chr5 40507662 40507704 -159122446 + (TA)n Simple_repeat Simple_repeat 1 42 0 25 83 0 0 chr5 40508203 40508263 -159121887 + AT_rich Low_complexity Low_complexity 1 60 0 23 86 0 0 chr5 40508294 40508352 -159121798 + AT_rich Low_complexity Low_complexity 1 58 0 2251 84 0 3 chr5 40508432 40508719 -159121431 + AluY SINE Alu 1 286 -25 390 108 0 0 chr5 40508719 40508784 -159121366 + (TA)n Simple_repeat Simple_repeat 2 66 0 238 286 0 0 chr5 40508954 40509024 -159121126 + T-rich Low_complexity Low_complexity 1 70 0 1817 177 3 3 chr5 40509311 40509616 -159120534 - AluJo SINE Alu -7 305 1 27 0 0 0 chr5 40510401 40510428 -159119722 + AT_rich Low_complexity Low_complexity 1 27 0 50 31 0 0 chr5 40510605 40510669 -159119481 + AT_rich Low_complexity Low_complexity 1 64 0 415 233 133 8 chr5 40510801 40510921 -159119229 - MIR SINE MIR -30 232 98 711 279 116 0 chr5 40511245 40511460 -159118690 - MIR SINE MIR 0 262 23 369 220 85 75 chr5 40511865 40512065 -159118085 - L1ME LINE L1 -303 5818 5617 292 241 63 49 chr5 40512160 40512391 -159117759 - L1ME LINE L1 -753 5489 5255 2255 103 0 10 chr5 40512579 40512891 -159117259 - AluSg SINE Alu -1 309 1 1870 158 0 7 chr5 40512893 40513191 -159116959 - AluSx SINE Alu -16 296 1 2181 107 0 0 chr5 40513480 40513770 -159116380 + AluSg SINE Alu 1 290 -20 1495 139 35 116 chr5 40513835 40514180 -159115970 + AluYb8 SINE Alu 1 317 -1 270 81 0 0 chr5 40514212 40514249 -159115901 + (CA)n Simple_repeat Simple_repeat 2 38 0 1542 193 14 7 chr5 40514439 40514573 -159115577 + AluJo SINE Alu 1 133 -179 2206 102 0 7 chr5 40514573 40514878 -159115272 + AluSg1 SINE Alu 1 303 -6 1542 193 14 7 chr5 40514878 40515023 -159115127 + AluJo SINE Alu 133 282 -30 1117 150 55 59 chr5 40515093 40515313 -159114837 - MER20 DNA MER1_type 0 219 1 21 0 0 0 chr5 40515863 40515884 -159114266 + AT_rich Low_complexity Low_complexity 1 21 0 2191 92 7 7 chr5 40516395 40516687 -159113463 + AluSx SINE Alu 1 292 -20 299 289 0 13 chr5 40517050 40517126 -159113024 + MER5C DNA MER1_type 1 75 -249 381 286 49 2 chr5 40517645 40517778 -159112372 + MIR SINE MIR 17 154 -63 2041 132 55 0 chr5 40518236 40518562 -159111588 - MER2 DNA MER2_type 0 344 1 193 257 29 43 chr5 40519022 40519092 -159111058 + MIR SINE MIR 58 126 -136 30 0 0 0 chr5 40519304 40519334 -159110816 + AT_rich Low_complexity Low_complexity 1 30 0 804 225 14 38 chr5 40519371 40519580 -159110570 - MIR SINE MIR -56 206 3 38 51 0 0 chr5 40519742 40519801 -159110349 + AT_rich Low_complexity Low_complexity 1 59 0 285 51 0 0 chr5 40520266 40520305 -159109845 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 286 0 48 chr5 40521027 40521111 -159109039 + MIR SINE MIR 119 198 -64 2014 117 3 51 chr5 40521508 40521824 -159108326 + AluSx SINE Alu 1 301 -11 1170 252 28 38 chr5 40521829 40522151 -159107999 - L1MC4 LINE L1 -27 8015 7696 1822 162 10 3 chr5 40522151 40522448 -159107702 - AluSx SINE Alu -9 303 5 1170 252 28 38 chr5 40522448 40522518 -159107632 - L1MC4 LINE L1 -346 7696 7627 527 204 142 37 chr5 40523419 40523581 -159106569 + MIR3 SINE MIR 29 207 -1 1764 149 33 33 chr5 40524329 40524414 -159105736 - MER44D DNA MER2_type -1883 608 524 1962 134 84 0 chr5 40524414 40524735 -159105415 - MER7A DNA MER2_type 0 346 1 1764 149 33 33 chr5 40524735 40524985 -159105165 - MER44D DNA MER2_type -1966 525 3 378 300 25 50 chr5 40525082 40525202 -159104948 - L2 LINE L2 0 3272 3156 2481 77 0 0 chr5 40525241 40525551 -159104599 + AluSg SINE Alu 1 310 0 2034 129 3 10 chr5 40526392 40526703 -159103447 + AluSx SINE Alu 1 309 -3 190 280 56 65 chr5 40526736 40526843 -159103307 - L2 LINE L2 -813 2501 2396 1040 185 43 56 chr5 40527059 40527291 -159102859 + AluJo SINE Alu 1 229 -83 186 291 93 0 chr5 40527306 40527392 -159102758 - L2 LINE L2 -1477 1837 1744 310 282 9 9 chr5 40528295 40528405 -159101745 + CT-rich Low_complexity Low_complexity 2 111 0 211 318 0 0 chr5 40529203 40529247 -159100903 + L2 LINE L2 3210 3253 -19 457 271 159 0 chr5 40529410 40529561 -159100589 + MER5A DNA MER1_type 9 183 -6 22 0 0 0 chr5 40530027 40530049 -159100101 + AT_rich Low_complexity Low_complexity 1 22 0 2243 111 0 0 chr5 40530550 40530838 -159099312 + AluSx SINE Alu 1 288 -24 266 210 16 0 chr5 40530908 40530970 -159099180 - L1ME LINE L1 -338 5828 5766 291 234 25 120 chr5 40531422 40531516 -159098634 - Charlie8 DNA MER1_type -137 193 118 1475 176 62 18 chr5 40531516 40531789 -159098361 - AluJo SINE Alu -27 285 1 291 234 25 120 chr5 40531789 40531852 -159098298 - Charlie8 DNA MER1_type -212 118 51 305 279 24 67 chr5 40531853 40532018 -159098132 - L2 LINE L2 -546 2768 2611 1175 182 46 83 chr5 40532624 40532721 -159097429 + MER2 DNA MER2_type 2 101 -244 1742 175 0 7 chr5 40532721 40533012 -159097138 + AluJb SINE Alu 1 289 -23 1175 182 46 83 chr5 40533012 40533171 -159096979 + MER2 DNA MER2_type 101 244 -101 2347 69 21 0 chr5 40533171 40533461 -159096689 - AluSq SINE Alu -17 296 1 1175 182 46 83 chr5 40533461 40533554 -159096596 + MER2 DNA MER2_type 244 339 -6 705 160 76 105 chr5 40533776 40533963 -159096187 + L1MB4 LINE L1 5950 6130 -50 1860 178 0 10 chr5 40533963 40534267 -159095883 + AluJb SINE Alu 1 301 -11 705 160 76 105 chr5 40534267 40534317 -159095833 + L1MB4 LINE L1 6130 6180 0 25 31 0 0 chr5 40534353 40534385 -159095765 + AT_rich Low_complexity Low_complexity 1 32 0 554 217 104 0 chr5 40534396 40534502 -159095648 + AluSq/x SINE Alu 4 120 -193 25 51 0 0 chr5 40534629 40534668 -159095482 + AT_rich Low_complexity Low_complexity 1 39 0 850 232 32 0 chr5 40534804 40534989 -159095161 + MER58A DNA MER1_type 33 223 -1 216 0 0 0 chr5 40537878 40537902 -159092248 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 312 237 103 10 chr5 40538083 40538180 -159091970 - MIR SINE MIR -71 191 86 2458 64 3 0 chr5 40538432 40538730 -159091420 + AluSp SINE Alu 1 299 -14 310 281 52 7 chr5 40540069 40540204 -159089946 - L1MC5 LINE L1 -89 7872 7732 2490 66 10 0 chr5 40540211 40540514 -159089636 - AluY SINE Alu -5 306 1 2383 75 3 0 chr5 40540707 40541000 -159089150 + AluSg SINE Alu 1 294 -16 275 340 39 0 chr5 40541943 40542046 -159088104 - MIR SINE MIR -68 140 34 182 315 108 23 chr5 40542878 40543008 -159087142 - L2 LINE L2 -956 2358 2218 194 280 0 20 chr5 40543244 40543294 -159086856 - L2 LINE L2 -2100 1214 1166 195 311 184 10 chr5 40543363 40543569 -159086581 - L2 LINE L2 -2341 973 732 223 209 0 0 chr5 40543664 40543707 -159086443 - L2 LINE L2 0 3313 3271 1693 161 75 11 chr5 40543994 40544274 -159085876 + AluJb SINE Alu 1 298 -14 230 301 217 63 chr5 40544358 40544754 -159085396 - L2 LINE L2 -341 2973 2517 377 214 201 56 chr5 40545116 40545439 -159084711 - HAL1 LINE L1 -59 2448 2079 1040 250 140 14 chr5 40545561 40546005 -159084145 - HAL1 LINE L1 -634 1873 1374 725 186 0 0 chr5 40546021 40546139 -159084011 + FLAM_C SINE Alu 1 118 -25 236 261 121 45 chr5 40546161 40546517 -159083633 - HAL1 LINE L1 -1138 1369 987 2111 104 4 4 chr5 40546549 40546855 -159083295 + AluSc SINE Alu 1 306 0 1922 143 6 37 chr5 40547287 40547609 -159082541 + AluJo SINE Alu 1 312 0 2081 136 48 0 chr5 40547641 40547936 -159082214 - AluSx SINE Alu -2 310 2 322 357 80 28 chr5 40548025 40548238 -159081912 - HAL1 LINE L1 -1511 996 773 643 187 161 7 chr5 40548261 40548416 -159081734 - MER58A DNA MER1_type 0 224 46 348 307 57 80 chr5 40548706 40548882 -159081268 - HAL1 LINE L1 -2299 208 37 2204 140 0 7 chr5 40548932 40549240 -159080910 - AluJb SINE Alu -5 307 2 734 129 32 32 chr5 40549240 40549364 -159080786 - AluJo SINE Alu -177 135 12 5988 89 14 2 chr5 40549374 40550696 -159079454 - L1PA11 LINE L1 -1 6173 4836 21 57 0 0 chr5 40551252 40551287 -159078863 + AT_rich Low_complexity Low_complexity 1 35 0 427 343 42 15 chr5 40551415 40551747 -159078403 + L1MEc LINE L1 207 547 -6016 395 177 204 26 chr5 40552347 40552364 -159077786 + L1MEc LINE L1 799 812 -5472 479 196 137 10 chr5 40552364 40552490 -159077660 + FLAM_C SINE Alu 2 140 0 395 177 204 26 chr5 40552490 40552644 -159077506 + L1MEc LINE L1 812 989 -5295 2184 104 0 27 chr5 40552650 40552948 -159077202 - AluSx SINE Alu -22 290 1 513 250 3 35 chr5 40552963 40553181 -159076969 + L1MEc LINE L1 1275 1448 -4832 804 104 16 6 chr5 40553184 40553434 -159076716 + AluSx SINE Alu 1 294 -15 316 266 53 4 chr5 40553442 40553596 -159076554 + L1MEc LINE L1 1641 1759 -4623 1236 186 55 6 chr5 40553601 40553913 -159076237 + L1 LINE L1 4575 4901 -1245 535 98 0 0 chr5 40553913 40553995 -159076155 - LTR9B LTR ERV1 -562 82 1 698 143 39 77 chr5 40553996 40554178 -159075972 + L1MEc LINE L1 2453 2627 -3755 671 254 11 0 chr5 40554194 40554383 -159075767 + L1PBa LINE L1 7 197 -6666 * 7581 143 35 14 chr5 40554380 40555823 -159074327 + L1PBa LINE L1 1392 2875 -3987 2121 96 32 7 chr5 40555823 40556104 -159074046 + AluSg SINE Alu 1 288 -22 7581 143 35 14 chr5 40556104 40556323 -159073827 + L1PBa LINE L1 2875 3088 -3774 2342 166 11 9 chr5 40557253 40557711 -159072439 + L1MEc LINE L1 2598 3056 -3326 2011 183 81 33 chr5 40557711 40558193 -159071957 + LTR22 LTR ERVK 1 505 -4 3622 132 29 5 chr5 40558198 40558789 -159071361 + HERVK22 LTR ERVK 1 605 -6232 2445 65 0 0 chr5 40558790 40559081 -159071069 - AluY SINE Alu -20 291 1 16812 91 9 0 chr5 40559083 40561450 -159068700 + HERVK22 LTR ERVK 694 3081 -3756 25120 97 8 8 chr5 40561460 40565091 -159065059 + HERVK22 LTR ERVK 3205 6837 0 1882 179 80 66 chr5 40565091 40565589 -159064561 + LTR22 LTR ERVK 1 505 -4 10307 196 17 2 chr5 40565594 40568327 -159061823 + L1P5 LINE L1 3051 5822 -565 237 132 0 0 chr5 40568334 40568383 -159061767 + L1PBa LINE L1 3094 3142 -3720 781 141 0 63 chr5 40568392 40568534 -159061616 + FLAM_C SINE Alu 1 133 0 298 207 0 0 chr5 40568559 40568617 -159061533 + L1 LINE L1 3373 3430 -3432 2399 146 72 16 chr5 40568657 40569145 -159061005 + L1M1 LINE L1 2052 2566 -4283 2928 194 16 69 chr5 40569147 40569437 -159060713 + L1M1 LINE L1 2816 3120 -3728 2387 92 0 0 chr5 40569437 40569741 -159060409 + AluSg1 SINE Alu 1 304 -5 2928 194 16 69 chr5 40569741 40570441 -159059709 + L1M1 LINE L1 3120 3912 -2936 21131 144 32 12 chr5 40570451 40573503 -159056647 - L1PA11 LINE L1 -2 6172 2985 2144 145 0 0 chr5 40573503 40573813 -159056337 - AluSx SINE Alu -2 310 1 21131 144 32 12 chr5 40573813 40575640 -159054510 - L1PA11 LINE L1 -3189 2985 1197 2042 120 0 7 chr5 40575646 40575930 -159054220 + AluSx SINE Alu 6 287 -25 2023 110 0 57 chr5 40575949 40576249 -159053901 + AluSq SINE Alu 1 283 -30 2629 159 23 63 chr5 40576261 40576345 -159053805 + L1M1 LINE L1 5443 5529 -1473 1845 169 10 3 chr5 40576345 40576653 -159053497 + AluJb SINE Alu 1 310 -2 2629 159 23 63 chr5 40576653 40577659 -159052491 + L1M1 LINE L1 5529 6481 -521 1104 96 6 0 chr5 40577659 40577805 -159052345 + L1MA4 LINE L1 6127 6293 -7 977 175 142 12 chr5 40577909 40578149 -159052001 - Charlie1 DNA MER1_type -219 2542 2272 195 69 0 0 chr5 40579141 40579170 -159050980 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 254 50 25 0 chr5 40579522 40579562 -159050588 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 210 37 0 0 chr5 40579830 40579857 -159050293 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 877 258 322 13 chr5 40580761 40580988 -159049162 + L2 LINE L2 2174 2330 -984 2200 112 3 0 chr5 40580988 40581282 -159048868 - AluSx SINE Alu -17 295 1 877 258 322 13 chr5 40581282 40581656 -159048494 + L2 LINE L2 2330 2961 -353 22 35 0 0 chr5 40581781 40581810 -159048340 + AT_rich Low_complexity Low_complexity 1 29 0 233 245 0 0 chr5 40581943 40581992 -159048158 + L2 LINE L2 3261 3309 -4 * 488 208 31 0 chr5 40581991 40582087 -159048063 - MIR SINE MIR -76 186 88 2594 56 0 0 chr5 40582129 40582432 -159047718 - AluY SINE Alu -8 303 1 2445 62 0 19 chr5 40582443 40582751 -159047399 - AluY SINE Alu -9 302 1 2506 101 22 6 chr5 40584466 40584824 -159045326 + THE1B LTR MaLR 1 364 0 230 336 67 0 chr5 40584913 40585032 -159045118 + L1MEd LINE L1 895 1021 -5098 2224 97 0 0 chr5 40585138 40585436 -159044714 - AluSc SINE Alu 0 298 1 380 281 33 8 chr5 40585492 40585613 -159044537 + MIR SINE MIR 139 262 0 208 241 84 60 chr5 40585633 40585716 -159044434 + MIR SINE MIR 92 176 -86 296 301 105 23 chr5 40585728 40585861 -159044289 - MIR SINE MIR -106 156 13 23 0 0 0 chr5 40585912 40585935 -159044215 + AT_rich Low_complexity Low_complexity 1 23 0 2181 117 3 0 chr5 40585943 40586243 -159043907 + AluSx SINE Alu 1 301 -11 186 279 82 33 chr5 40586830 40586891 -159043259 - MIR SINE MIR -152 110 47 2209 112 10 3 chr5 40586914 40587218 -159042932 - AluSc SINE Alu -3 306 1 1700 167 0 69 chr5 40587330 40587530 -159042620 + AluJb SINE Alu 1 173 -139 2169 138 0 3 chr5 40587530 40587841 -159042309 + AluSx SINE Alu 3 312 0 1700 167 0 69 chr5 40587841 40587957 -159042193 + AluJb SINE Alu 173 295 -17 1659 144 26 46 chr5 40589438 40589743 -159040407 + AluJo SINE Alu 1 299 -13 671 220 43 0 chr5 40589854 40589995 -159040155 + MIR SINE MIR 29 175 -87 2467 74 0 0 chr5 40590038 40590337 -159039813 - AluSc SINE Alu -10 299 1 2289 95 3 16 chr5 40590714 40591020 -159039130 + AluSp SINE Alu 1 302 -11 2452 69 0 7 chr5 40591029 40591333 -159038817 + AluY SINE Alu 1 302 -9 823 207 12 6 chr5 40591749 40591918 -159038232 + FAM SINE Alu 1 170 -5 1371 65 0 6 chr5 40593207 40593376 -159036774 - AluSq SINE Alu -15 298 131 575 103 4 1 chr5 40593997 40594231 -159035919 + AluSx SINE Alu 41 304 -5 1293 188 92 37 chr5 40594880 40595151 -159034999 - AluJo SINE Alu -26 286 1 333 136 0 0 chr5 40595252 40595318 -159034832 + (CA)n Simple_repeat Simple_repeat 2 67 0 1541 175 4 18 chr5 40595852 40596132 -159034018 - AluJo SINE Alu -1 311 36 691 87 10 0 chr5 40597094 40597197 -159032953 - L1MA2 LINE L1 0 6304 6201 1718 169 17 14 chr5 40597269 40597565 -159032585 + AluJb SINE Alu 1 297 -15 911 288 48 31 chr5 40597585 40597977 -159032173 + LTR16B LTR ERVL 66 464 0 576 222 86 0 chr5 40598029 40598146 -159032004 + FLAM_A SINE Alu 1 127 -6 1678 205 116 0 chr5 40598243 40598604 -159031546 + MER68 LTR ERV1 160 562 0 295 255 74 54 chr5 40598604 40598749 -159031401 + LTR16B LTR ERVL 317 464 0 2419 87 10 6 chr5 40598817 40599129 -159031021 - AluSq SINE Alu 0 313 1 216 0 0 0 chr5 40599142 40599166 -159030984 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1221 182 5 5 chr5 40599173 40599376 -159030774 + AluJb SINE Alu 103 305 -7 22 56 0 0 chr5 40599426 40599462 -159030688 + AT_rich Low_complexity Low_complexity 1 36 0 321 100 0 0 chr5 40599479 40599529 -159030621 - AluJo SINE Alu -161 141 92 5845 127 37 9 chr5 40599774 40599892 -159030258 + L1PB1 LINE L1 4469 4582 -1569 1983 124 40 7 chr5 40599892 40600190 -159029960 + AluSx SINE Alu 5 312 0 5845 127 37 9 chr5 40600190 40601701 -159028449 + L1PB1 LINE L1 4582 6144 -7 21 36 0 0 chr5 40602822 40602850 -159027300 + AT_rich Low_complexity Low_complexity 1 28 0 2218 92 7 3 chr5 40602850 40603143 -159027007 - AluSq SINE Alu -19 294 1 821 179 8 0 chr5 40603148 40603271 -159026879 - FLAM_C SINE Alu -19 124 1 9563 210 77 27 chr5 40603560 40603651 -159026499 - L1P LINE L1 -776 5379 5294 2535 48 0 10 chr5 40603651 40603960 -159026190 - AluY SINE Alu -5 306 1 9563 210 77 27 chr5 40603960 40604811 -159025339 - L1P LINE L1 -861 5294 4486 306 50 0 0 chr5 40604811 40604851 -159025299 + (TG)n Simple_repeat Simple_repeat 2 41 0 9563 210 77 27 chr5 40604851 40606108 -159024042 - L1P LINE L1 -1669 4486 3292 2340 94 10 0 chr5 40606108 40606406 -159023744 - AluSp SINE Alu -12 301 1 9563 210 77 27 chr5 40606406 40606641 -159023509 - L1P LINE L1 -2863 3292 3070 2132 116 42 53 chr5 40606641 40606866 -159023284 - THE1C LTR MaLR 0 375 154 2201 117 7 0 chr5 40606866 40607165 -159022985 + AluSc SINE Alu 1 301 -8 2132 116 42 53 chr5 40607165 40607318 -159022832 - THE1C LTR MaLR -221 154 1 10471 104 44 5 chr5 40607318 40608838 -159021312 - THE1C-int LTR MaLR 0 1580 1 2482 116 8 16 chr5 40608838 40609216 -159020934 - THE1C LTR MaLR 0 375 1 9563 210 77 27 chr5 40609216 40609700 -159020450 - L1P LINE L1 -3084 3071 2299 24 32 0 0 chr5 40610685 40610716 -159019434 + AT_rich Low_complexity Low_complexity 1 31 0 1703 179 11 0 chr5 40610878 40611163 -159018987 - AluJo SINE Alu -24 288 1 972 55 34 20 chr5 40612130 40612276 -159017874 - MER30 DNA MER1_type -74 156 9 186 218 195 11 chr5 40612709 40612796 -159017354 - MIR SINE MIR -46 216 114 538 251 82 27 chr5 40613127 40613286 -159016864 + MIR SINE MIR 98 262 0 617 355 98 28 chr5 40614025 40614638 -159015512 + L1MEd LINE L1 132 845 -5360 621 263 39 42 chr5 40614774 40614965 -159015185 + L1MEd LINE L1 981 1172 -5033 2170 123 0 3 chr5 40614965 40615266 -159014884 + AluSp SINE Alu 1 300 -13 621 263 39 42 chr5 40615266 40615386 -159014764 + L1MEd LINE L1 1172 1291 -4914 2141 105 34 0 chr5 40615441 40615736 -159014414 + AluY SINE Alu 1 305 -6 2471 67 0 0 chr5 40615883 40616182 -159013968 + AluY SINE Alu 1 299 -12 2188 109 0 13 chr5 40616337 40616641 -159013509 + AluSc SINE Alu 1 300 -9 1181 131 0 0 chr5 40616745 40616905 -159013245 - FAM SINE Alu -12 163 4 502 303 113 40 chr5 40616932 40617259 -159012891 + L1MEd LINE L1 2043 2393 -4003 1406 211 40 59 chr5 40617261 40617497 -159012653 + L1MC5 LINE L1 7345 7584 -377 2382 89 0 0 chr5 40617497 40617790 -159012360 - AluSg SINE Alu -17 293 1 1406 211 40 59 chr5 40617790 40618150 -159012000 + L1MC5 LINE L1 7584 7930 -31 417 303 46 16 chr5 40618169 40618661 -159011489 + L1MEd LINE L1 2387 2899 -3316 243 0 0 0 chr5 40619285 40619312 -159010838 + (A)n Simple_repeat Simple_repeat 1 27 0 313 242 217 32 chr5 40619805 40619962 -159010188 - MIR3 SINE MIR -10 198 13 2079 130 0 0 chr5 40620083 40620368 -159009782 + AluSx SINE Alu 2 286 -26 1549 135 93 32 chr5 40620464 40620544 -159009606 - MER44D DNA MER2_type -1890 601 527 1698 147 74 21 chr5 40620544 40620870 -159009280 + MER2 DNA MER2_type 2 344 0 1549 135 93 32 chr5 40620870 40621101 -159009049 - MER44D DNA MER2_type -1964 527 1 211 171 0 0 chr5 40621259 40621294 -159008856 - L2 LINE L2 -7 3306 3272 244 298 127 53 chr5 40621515 40621825 -159008325 + L2 LINE L2 2048 2403 -911 216 97 0 0 chr5 40621825 40621856 -159008294 + (CA)n Simple_repeat Simple_repeat 2 32 0 244 298 127 53 chr5 40621856 40621995 -159008155 + L2 LINE L2 2403 2530 -784 633 235 12 47 chr5 40622081 40622251 -159007899 + MER5A DNA MER1_type 26 189 0 227 282 202 27 chr5 40622260 40622448 -159007702 + L2 LINE L2 2633 2853 -461 452 322 29 12 chr5 40622695 40622866 -159007284 + L2 LINE L2 3140 3313 0 904 120 0 0 chr5 40623080 40623205 -159006945 + AluJb SINE Alu 1 125 -187 1383 178 13 9 chr5 40623493 40623724 -159006426 - AluJo SINE Alu -17 295 64 25 31 0 0 chr5 40623867 40623899 -159006251 + AT_rich Low_complexity Low_complexity 1 32 0 1534 221 10 10 chr5 40623925 40624232 -159005918 + AluJo SINE Alu 6 312 0 671 216 16 46 chr5 40624489 40624683 -159005467 + L1MEd LINE L1 3523 3710 -2505 1216 159 24 0 chr5 40624729 40624937 -159005213 + MER20 DNA MER1_type 6 218 -1 681 295 216 30 chr5 40625710 40625782 -159004368 + L2 LINE L2 1917 1974 -1340 879 130 15 0 chr5 40625782 40625913 -159004237 - FLAM_C SINE Alu 0 133 1 681 295 216 30 chr5 40625913 40626630 -159003520 + L2 LINE L2 1974 2853 -461 1950 167 0 0 chr5 40626688 40626988 -159003162 - AluJo SINE Alu -12 300 1 232 192 110 41 chr5 40627106 40627179 -159002971 - MIR SINE MIR -138 124 47 1922 172 0 3 chr5 40627635 40627925 -159002225 + AluJo SINE Alu 1 289 -23 31 26 0 0 chr5 40627935 40627973 -159002177 + AT_rich Low_complexity Low_complexity 1 38 0 1323 154 14 0 chr5 40628046 40628267 -159001883 + L1PA16 LINE L1 5940 6163 -3 234 0 0 0 chr5 40629246 40629272 -159000878 + (A)n Simple_repeat Simple_repeat 1 26 0 346 138 0 85 chr5 40630078 40630104 -159000046 - L1MB7 LINE L1 -11 6173 6146 2304 85 17 3 chr5 40630104 40630397 -158999753 - AluY SINE Alu -14 297 1 346 138 0 85 chr5 40630397 40630408 -158999742 - L1MB7 LINE L1 -38 6146 6136 2927 6 0 0 chr5 40630408 40630724 -158999426 - AluYb8 SINE Alu -2 316 1 346 138 0 85 chr5 40630724 40630779 -158999371 - L1MB7 LINE L1 -48 6136 6088 33 43 0 0 chr5 40631400 40631447 -158998703 + AT_rich Low_complexity Low_complexity 1 47 0 1887 133 0 40 chr5 40631594 40631894 -158998256 + AluSx SINE Alu 9 296 -16 253 187 55 33 chr5 40631942 40631985 -158998165 + L1ME4a LINE L1 5389 5430 -2378 2565 60 0 0 chr5 40631985 40632284 -158997866 - AluY SINE Alu -12 299 1 253 187 55 33 chr5 40632284 40632331 -158997819 + L1ME4a LINE L1 5430 5481 -2327 257 254 118 0 chr5 40633052 40633162 -158996988 + L1ME4a LINE L1 5968 6090 -31 2301 95 0 0 chr5 40633998 40634293 -158995857 - AluSx SINE Alu -17 295 1 292 350 25 61 chr5 40634356 40634553 -158995597 - L2 LINE L2 -496 2818 2629 1283 232 87 100 chr5 40634893 40635504 -158994646 + MER21B LTR ERV1 1 603 -260 1696 190 3 7 chr5 40636136 40636426 -158993724 + AluJo SINE Alu 1 289 -23 26 0 0 0 chr5 40636426 40636452 -158993698 + AT_rich Low_complexity Low_complexity 1 26 0 1863 146 18 26 chr5 40637703 40638045 -158992105 + MER44D DNA MER2_type 1 609 0 22 35 0 0 chr5 40638910 40638939 -158991211 + AT_rich Low_complexity Low_complexity 1 29 0 815 137 0 72 chr5 40639384 40639523 -158990627 - FLAM_C SINE Alu -14 129 1 373 262 52 86 chr5 40641725 40641992 -158988158 + L1ME4a LINE L1 5863 6120 -1 1914 109 12 0 chr5 40642148 40642405 -158987745 + AluSg SINE Alu 38 297 -13 2159 72 48 0 chr5 40642443 40642733 -158987417 + AluY SINE Alu 1 304 -7 205 290 81 0 chr5 40642758 40642820 -158987330 + MIR3 SINE MIR 119 185 -23 338 255 103 48 chr5 40642872 40643017 -158987133 - MIR SINE MIR 0 262 110 28 0 0 0 chr5 40643043 40643071 -158987079 + AT_rich Low_complexity Low_complexity 1 28 0 2259 79 7 3 chr5 40643077 40643368 -158986782 + AluSq SINE Alu 14 305 -8 21 36 0 0 chr5 40643377 40643405 -158986745 + AT_rich Low_complexity Low_complexity 1 28 0 202 348 33 33 chr5 40643406 40643498 -158986652 - MIR3 SINE MIR -103 105 14 398 79 13 13 chr5 40643518 40643594 -158986556 + L1MA4A LINE L1 6225 6300 -3 271 260 41 0 chr5 40645521 40645594 -158984556 + L2 LINE L2 3238 3313 0 265 177 151 4 chr5 40645822 40645895 -158984255 + FRAM/FAM SINE Alu 16 65 -101 429 92 79 0 chr5 40645895 40645971 -158984179 + AluS SINE Alu 1 82 -231 203 358 6 12 chr5 40646103 40646276 -158983874 + CT-rich Low_complexity Low_complexity 1 172 0 462 186 0 0 chr5 40647111 40647197 -158982953 - L1ME3A LINE L1 -10 6160 6075 603 168 8 40 chr5 40647438 40647563 -158982587 - FLAM_A SINE Alu 0 142 22 2014 85 38 24 chr5 40647937 40648230 -158981920 + AluY SINE Alu 1 297 -14 1299 171 21 39 chr5 40648510 40648796 -158981354 - AluJo SINE Alu -30 282 2 1037 143 6 12 chr5 40649653 40649814 -158980336 + AluJb SINE Alu 1 160 -152 183 156 0 0 chr5 40649839 40649871 -158980279 + A-rich Low_complexity Low_complexity 1 32 0 2387 85 0 0 chr5 40650062 40650357 -158979793 - AluY SINE Alu -16 295 1 1662 129 19 15 chr5 40651360 40651624 -158978526 + AluSx SINE Alu 48 312 0 1617 143 61 54 chr5 40651642 40651936 -158978214 + AluJo SINE Alu 5 300 -12 1823 162 7 23 chr5 40652062 40652365 -158977785 - AluJo SINE Alu -14 298 1 13591 66 10 27 chr5 40653559 40655530 -158974620 + HERVL LTR ERVL 2085 4021 -1633 2231 79 0 0 chr5 40655533 40655812 -158974338 - AluSx SINE Alu -17 295 17 1574 111 9 0 chr5 40655913 40656129 -158974021 - AluSx SINE Alu -94 218 1 404 95 32 0 chr5 40656129 40656192 -158973958 + MSTB1 LTR MaLR 364 428 -4 2088 145 0 19 chr5 40656582 40656900 -158973250 - AluJb SINE Alu 0 312 1 1887 165 3 19 chr5 40657400 40657716 -158972434 + AluJb SINE Alu 2 312 0 2014 127 0 36 chr5 40657716 40658024 -158972126 + AluSx SINE Alu 1 297 -15 1605 186 14 11 chr5 40658024 40658303 -158971847 - AluJo SINE Alu -31 281 1 2305 77 0 14 chr5 40658338 40658635 -158971515 - AluY SINE Alu -18 293 1 2782 139 58 36 chr5 40658635 40659238 -158970912 - L1PB4 LINE L1 -28 6128 5513 305 259 138 9 chr5 40659407 40659523 -158970627 - L1ME3A LINE L1 -2059 5749 5619 845 161 10 120 chr5 40659530 40659569 -158970581 - AluJo SINE Alu -139 173 131 2403 97 0 0 chr5 40659569 40659869 -158970281 - AluSg SINE Alu -10 300 1 845 161 10 120 chr5 40659869 40660021 -158970129 - AluJo SINE Alu -181 131 3 2313 104 0 7 chr5 40660143 40660451 -158969699 - AluSq SINE Alu -7 306 1 2978 167 35 7 chr5 40660512 40661052 -158969098 - MER68 LTR ERV1 -7 555 1 21 0 0 0 chr5 40661079 40661100 -158969050 + AT_rich Low_complexity Low_complexity 1 21 0 2301 93 3 10 chr5 40661112 40661422 -158968728 - AluSq SINE Alu -5 308 1 2208 92 0 3 chr5 40661475 40661793 -158968357 - AluSx SINE Alu 0 317 1 290 300 58 8 chr5 40662147 40662267 -158967883 - L2 LINE L2 -1 3312 3187 1911 124 3 18 chr5 40662675 40662958 -158967192 - AluJb SINE Alu -33 279 1 1914 164 0 16 chr5 40663087 40663399 -158966751 + AluSx SINE Alu 5 311 -1 243 146 0 0 chr5 40663456 40663497 -158966653 + (A)n Simple_repeat Simple_repeat 1 41 0 1467 142 8 23 chr5 40663632 40663871 -158966279 - Tigger2 DNA MER2_type 0 2718 2482 2274 107 7 0 chr5 40663871 40664169 -158965981 + AluSp SINE Alu 1 300 -13 1467 142 8 23 chr5 40664169 40664189 -158965961 - Tigger2 DNA MER2_type -236 2482 2463 3764 167 26 23 chr5 40664253 40664732 -158965418 - Tigger2 DNA MER2_type -1974 744 261 1821 148 0 46 chr5 40664732 40665037 -158965113 - AluJb SINE Alu -21 291 1 3764 167 26 23 chr5 40665037 40665299 -158964851 - Tigger2 DNA MER2_type -2457 261 1 26 50 0 0 chr5 40665890 40665930 -158964220 + AT_rich Low_complexity Low_complexity 1 40 0 370 221 0 0 chr5 40665930 40665998 -158964152 - FLAM_A SINE Alu -8 125 58 860 105 0 0 chr5 40665998 40666112 -158964038 - AluSp/q SINE Alu -17 296 183 5044 226 41 3 chr5 40666271 40667529 -158962621 - L1M2 LINE L1 -4464 2385 1080 501 339 17 13 chr5 40667911 40668144 -158962006 - L1M2 LINE L1 -6419 430 197 1875 157 10 22 chr5 40668242 40668555 -158961595 - AluJo SINE Alu -3 309 1 2096 128 0 7 chr5 40668569 40668874 -158961276 - AluSg1 SINE Alu -6 303 1 47 0 0 0 chr5 40669300 40669347 -158960803 + AT_rich Low_complexity Low_complexity 1 47 0 198 103 0 0 chr5 40671420 40671449 -158958701 + (T)n Simple_repeat Simple_repeat 1 29 0 593 271 111 76 chr5 40671473 40671687 -158958463 - L2 LINE L2 -69 3244 3039 2294 62 0 36 chr5 40671687 40671991 -158958159 - AluY SINE Alu -18 293 1 593 271 111 76 chr5 40671991 40672142 -158958008 - L2 LINE L2 -274 3039 2895 1521 169 48 11 chr5 40672142 40672481 -158957669 + AluJb SINE Alu 1 349 0 593 271 111 76 chr5 40672481 40672636 -158957514 - L2 LINE L2 -418 2895 2696 180 300 12 100 chr5 40673446 40673526 -158956624 - L2 LINE L2 -67 3205 3133 395 184 135 80 chr5 40673639 40673802 -158956348 + MER112 DNA MER1_type 77 248 -12 834 200 130 0 chr5 40674291 40674476 -158955674 + MER3 DNA MER1_type 1 209 0 1016 168 6 0 chr5 40674509 40674670 -158955480 + AluJb SINE Alu 135 296 -16 2206 119 0 3 chr5 40675353 40675665 -158954485 - AluSx SINE Alu -1 311 1 25 0 0 0 chr5 40675776 40675801 -158954349 + AT_rich Low_complexity Low_complexity 1 25 0 258 281 16 0 chr5 40675949 40676013 -158954137 - L3 LINE CR1 -11 1566 1502 354 281 39 45 chr5 40676437 40676615 -158953535 + L1MEd LINE L1 2 178 -5941 1607 215 96 15 chr5 40676705 40676722 -158953428 + L1ME1 LINE L1 5664 5678 -488 1876 169 3 19 chr5 40676722 40677029 -158953121 + AluJb SINE Alu 1 302 -10 1607 215 96 15 chr5 40677029 40677471 -158952679 + L1ME1 LINE L1 5678 6157 -9 257 254 118 0 chr5 40678259 40678369 -158951781 - L1ME4a LINE L1 -31 6090 5968 2546 57 0 0 chr5 40679137 40679433 -158950717 + AluY SINE Alu 1 296 -15 1903 166 7 0 chr5 40679582 40679877 -158950273 + AluJo SINE Alu 1 297 -15 311 183 70 0 chr5 40680676 40680747 -158949403 + L1MC5 LINE L1 7155 7230 -731 2081 123 10 3 chr5 40680908 40681218 -158948932 + AluSx SINE Alu 1 312 0 348 240 107 53 chr5 40681262 40681412 -158948738 + L1MC5 LINE L1 7334 7491 -470 711 169 42 30 chr5 40681857 40682023 -158948127 + MLT1E2 LTR MaLR 457 624 -2 994 153 48 19 chr5 40682057 40682266 -158947884 - L1MB7 LINE L1 -19 6165 5951 22 56 0 0 chr5 40682956 40682992 -158947158 + AT_rich Low_complexity Low_complexity 1 36 0 1068 171 0 0 chr5 40683285 40683461 -158946689 + FRAM SINE Alu 1 171 -5 316 220 93 42 chr5 40683853 40683971 -158946179 + L2 LINE L2 3146 3269 -3 638 321 85 54 chr5 40684035 40684589 -158945561 + MLT1K LTR MaLR 18 588 0 1395 152 0 0 chr5 40685167 40685371 -158944779 - AluJb SINE Alu -15 297 94 1376 133 133 0 chr5 40685480 40685691 -158944459 - AluSx SINE Alu -73 239 1 499 251 59 75 chr5 40686157 40686276 -158943874 - MER112 DNA MER1_type -2 254 135 2333 111 0 3 chr5 40686276 40686583 -158943567 + AluSx SINE Alu 1 306 -6 499 251 59 75 chr5 40686583 40686718 -158943432 - MER112 DNA MER1_type -121 135 4 1431 152 20 48 chr5 40686848 40687098 -158943052 + AluJo SINE Alu 1 243 -69 4563 111 90 126 chr5 40687233 40687810 -158942340 + Tigger3b DNA MER2_type 2 598 -2430 751 156 7 30 chr5 40687810 40687945 -158942205 + AluJo SINE Alu 1 132 -170 1797 168 13 0 chr5 40687948 40688246 -158941904 + AluSx SINE Alu 1 302 -10 560 217 8 42 chr5 40688252 40688372 -158941778 + AluJo SINE Alu 141 256 -56 4563 111 90 126 chr5 40688372 40688767 -158941383 + Tigger3b DNA MER2_type 605 1064 -167 785 143 0 0 chr5 40688798 40688910 -158941240 - FAM SINE Alu -19 166 55 741 195 104 0 chr5 40688911 40689065 -158941085 + Tigger3b DNA MER2_type 1061 1230 -1 2369 65 34 0 chr5 40689142 40689435 -158940715 + AluY SINE Alu 1 303 -8 2123 89 10 17 chr5 40689446 40689737 -158940413 + AluSg SINE Alu 1 289 -21 2117 148 0 0 chr5 40689932 40690236 -158939914 + AluSx SINE Alu 1 304 -8 957 160 6 29 chr5 40690288 40690463 -158939687 - FRAM SINE Alu -5 171 1 2321 111 0 7 chr5 40690474 40690781 -158939369 - AluSg SINE Alu -5 305 1 981 157 54 0 chr5 40691218 40691384 -158938766 - FAM SINE Alu 0 175 1 1511 62 10 16 chr5 40691430 40691624 -158938526 + AluY SINE Alu 1 193 -118 2304 89 3 3 chr5 40691822 40692114 -158938036 + AluSg SINE Alu 1 292 -18 405 172 99 6 chr5 40692493 40692725 -158937425 + AluJo SINE Alu 1 297 -5 512 92 64 29 chr5 40693423 40693596 -158936554 + (TA)n Simple_repeat Simple_repeat 2 180 0 2428 72 3 0 chr5 40693608 40693900 -158936250 - AluSp SINE Alu -19 294 2 896 213 35 0 chr5 40694495 40694669 -158935481 + AluJo SINE Alu 119 298 -14 1991 51 31 8 chr5 40694669 40694923 -158935227 + AluY SINE Alu 50 309 -2 486 0 0 0 chr5 40695049 40695103 -158935047 + (TA)n Simple_repeat Simple_repeat 1 54 0 1901 171 3 28 chr5 40695908 40696235 -158933915 - 7SLRNA srpRNA srpRNA -1 319 1 482 240 260 0 chr5 40696397 40696438 -158933712 + MER5A DNA MER1_type 1 30 -159 1691 116 4 16 chr5 40696438 40696689 -158933461 + AluSx SINE Alu 62 309 -3 482 240 260 0 chr5 40696689 40696797 -158933353 + MER5A DNA MER1_type 30 189 0 2038 123 28 3 chr5 40697554 40697839 -158932311 - AluSx SINE Alu -14 298 7 2272 88 0 7 chr5 40697890 40698185 -158931965 - AluSq SINE Alu -20 293 1 682 153 22 22 chr5 40698294 40698431 -158931719 + FAM SINE Alu 1 41 -8 255 233 41 0 chr5 40698488 40698561 -158931589 + L1MC5 LINE L1 7158 7233 -728 193 222 44 0 chr5 40700383 40700428 -158929722 - L2 LINE L2 -12 3301 3255 2345 94 0 0 chr5 40700792 40701090 -158929060 - AluSg SINE Alu -12 298 1 649 172 9 9 chr5 40701376 40701492 -158928658 + MER3 DNA MER1_type 6 121 -88 785 249 9 6 chr5 40701509 40701714 -158928436 - MLT1J1 LTR MaLR -223 227 15 1432 132 21 155 chr5 40701846 40702043 -158928107 + MSTA LTR MaLR 2 171 -255 816 161 0 0 chr5 40702043 40702161 -158927989 + AluSg/x SINE Alu 171 288 -22 1432 132 21 155 chr5 40702161 40702387 -158927763 + MSTA LTR MaLR 171 426 0 214 317 0 0 chr5 40702390 40702450 -158927700 - MER5A DNA MER1_type -2 187 128 1326 131 0 0 chr5 40702453 40702629 -158927521 + AluSx SINE Alu 1 176 -136 2374 94 0 3 chr5 40703002 40703299 -158926851 + AluSx SINE Alu 1 296 -16 1177 137 0 0 chr5 40703299 40703460 -158926690 + AluSg/x SINE Alu 132 292 -18 208 180 20 0 chr5 40703535 40703585 -158926565 + (TA)n Simple_repeat Simple_repeat 2 52 0 2174 129 0 0 chr5 40703645 40703948 -158926202 + AluSx SINE Alu 1 303 -9 2182 150 110 12 chr5 40703948 40704347 -158925803 + MER65A LTR ERV1 8 445 0 884 236 73 63 chr5 40704434 40704855 -158925295 + MER65A-int LTR ERV1 83 564 -4307 2498 68 3 13 chr5 40704855 40705166 -158924984 - AluY SINE Alu -3 308 1 884 236 73 63 chr5 40705166 40705364 -158924786 + MER65A-int LTR ERV1 564 759 -4112 474 198 81 0 chr5 40705364 40705450 -158924700 - AluJ/FLAM SINE Alu -218 94 2 885 161 15 49 chr5 40705597 40705802 -158924348 + MER31-int LTR ERV1 3533 3730 -2868 824 144 6 77 chr5 40705882 40706063 -158924087 + MER31-int LTR ERV1 3730 3897 -2701 417 211 0 0 chr5 40706071 40706147 -158924003 - FLAM_A SINE Alu -22 120 45 437 158 100 25 chr5 40706147 40706267 -158923883 + MER31-int LTR ERV1 3884 4012 -2586 1505 202 80 100 chr5 40706288 40706688 -158923462 + MER31-int LTR ERV1 4602 5008 -1590 2217 129 0 10 chr5 40706688 40706823 -158923327 + AluSq SINE Alu 1 136 -177 2384 87 0 13 chr5 40706823 40707134 -158923016 + AluY SINE Alu 1 307 -4 2217 129 0 10 chr5 40707134 40707308 -158922842 + AluSq SINE Alu 136 307 -6 2220 103 17 0 chr5 40707314 40707606 -158922544 + AluSp SINE Alu 1 297 -16 1505 202 80 100 chr5 40707606 40707657 -158922493 + MER31-int LTR ERV1 5013 5064 -1534 2131 112 0 0 chr5 40707657 40707975 -158922175 - AluSx SINE Alu 0 318 1 1505 202 80 100 chr5 40707975 40708069 -158922081 + MER31-int LTR ERV1 5064 5158 -1440 1745 199 0 3 chr5 40708069 40708375 -158921775 + AluJb SINE Alu 1 305 -7 1505 202 80 100 chr5 40708375 40708564 -158921586 + MER31-int LTR ERV1 5158 5349 -1249 16908 52 4 0 chr5 40708564 40711415 -158918735 - L1PA5 LINE L1 -4 6150 3282 1505 202 80 100 chr5 40711415 40711516 -158918634 + MER31-int LTR ERV1 5349 5451 -1147 250 80 40 0 chr5 40711516 40711566 -158918584 + (TTA)n Simple_repeat Simple_repeat 2 53 0 1894 164 0 0 chr5 40711569 40711849 -158918301 - AluSx SINE Alu -30 282 3 1987 125 28 0 chr5 40711851 40712140 -158918010 - AluSx SINE Alu -15 297 1 1505 202 80 100 chr5 40712140 40712243 -158917907 + MER31-int LTR ERV1 5454 5584 -1014 329 236 0 42 chr5 40712263 40712335 -158917815 + MER31-int LTR ERV1 3884 3952 -984 2396 89 0 0 chr5 40712397 40712700 -158917450 + AluY SINE Alu 1 303 -8 1887 249 77 28 chr5 40712722 40713232 -158916918 + MER31-int LTR ERV1 3598 4132 -739 672 198 90 6 chr5 40713235 40713412 -158916738 + MER31-int LTR ERV1 4240 4431 -440 2751 161 16 31 chr5 40713420 40713577 -158916573 - L1MA3 LINE L1 0 6305 6147 2221 121 0 0 chr5 40713577 40713875 -158916275 + AluSc SINE Alu 1 298 -11 2751 161 16 31 chr5 40713875 40714269 -158915881 - L1MA3 LINE L1 -158 6147 5762 3196 86 20 14 chr5 40714269 40714710 -158915440 - MLT2A1 LTR ERVL 0 444 1 45726 62 6 12 chr5 40714710 40716344 -158913806 - HERVL-A1 LTR ERVL 0 5654 4011 2335 92 0 0 chr5 40716344 40716639 -158913511 + AluSx SINE Alu 1 295 -17 45726 62 6 12 chr5 40716639 40718835 -158911315 - HERVL-A1 LTR ERVL -1643 4011 1802 2344 104 0 0 chr5 40718835 40719134 -158911016 + AluSx SINE Alu 1 299 -13 45726 62 6 12 chr5 40719134 40719524 -158910626 - HERVL-A1 LTR ERVL -3852 1802 1411 2238 111 3 0 chr5 40719524 40719821 -158910329 - AluSx SINE Alu -2 310 13 45726 62 6 12 chr5 40719821 40721289 -158908861 - HERVL-A1 LTR ERVL -4243 1411 1 2661 102 82 5 chr5 40721289 40721329 -158908821 - MLT2A1 LTR ERVL 0 444 409 432 0 0 0 chr5 40721329 40721377 -158908773 + (CA)n Simple_repeat Simple_repeat 2 49 0 2661 102 82 5 chr5 40721377 40721748 -158908402 - MLT2A1 LTR ERVL -35 409 1 415 256 17 26 chr5 40722032 40722149 -158908001 + HsTC2 DNA Tc2 1282 1573 -325 1066 233 115 58 chr5 40722167 40722601 -158907549 - LTR40c LTR ERVL -6 459 1 808 187 30 123 chr5 40722601 40722801 -158907349 + HsTC2 DNA Tc2 1567 1784 -114 2446 76 0 3 chr5 40722801 40723103 -158907047 - AluSc SINE Alu -8 301 1 808 187 30 123 chr5 40723103 40723182 -158906968 + HsTC2 DNA Tc2 1784 1797 -101 2347 110 0 0 chr5 40723182 40723492 -158906658 - AluSg SINE Alu 0 310 1 808 187 30 123 chr5 40723492 40723584 -158906566 + HsTC2 DNA Tc2 1797 1896 -2 1301 148 0 38 chr5 40723799 40724047 -158906103 + AluJb SINE Alu 83 322 0 23 33 0 0 chr5 40724359 40724389 -158905761 + AT_rich Low_complexity Low_complexity 1 30 0 447 141 0 0 chr5 40724531 40724602 -158905548 + AluS SINE Alu 2 72 -246 1753 124 17 27 chr5 40724602 40724901 -158905249 + LTR7 LTR ERV1 153 448 -2 1756 97 0 4 chr5 40724901 40725129 -158905021 + AluSq SINE Alu 72 298 -15 1536 167 52 11 chr5 40725400 40725687 -158904463 - AluJo SINE Alu -13 299 1 2457 207 49 67 chr5 40725888 40726116 -158904034 - L1ME LINE L1 -371 6031 5800 2278 121 0 10 chr5 40726116 40726429 -158903721 - AluSq SINE Alu -3 310 1 2457 207 49 67 chr5 40726429 40726760 -158903390 - L1ME LINE L1 -602 5800 5465 1796 124 83 0 chr5 40726760 40727026 -158903124 - AluSq SINE Alu -25 288 1 2457 207 49 67 chr5 40727026 40727202 -158902948 - L1ME LINE L1 -937 5465 5287 2375 106 0 6 chr5 40727202 40727514 -158902636 + AluSx SINE Alu 1 310 -2 2164 126 7 3 chr5 40727517 40727826 -158902324 + AluSp SINE Alu 1 310 -3 2457 207 49 67 chr5 40727826 40728398 -158901752 - L1ME LINE L1 -1117 5285 4747 763 150 0 0 chr5 40728405 40728518 -158901632 - AluSc SINE Alu -26 283 171 399 206 15 0 chr5 40728518 40728586 -158901564 - AluJ/FLAM SINE Alu -233 69 1 2184 111 3 0 chr5 40728629 40728917 -158901233 - AluSq SINE Alu -24 289 1 1142 238 67 67 chr5 40728918 40729128 -158901022 - L1ME LINE L1 -1747 4635 4427 2266 104 0 3 chr5 40729128 40729427 -158900723 + AluSg SINE Alu 1 298 -12 1142 238 67 67 chr5 40729427 40729577 -158900573 - L1ME LINE L1 -1955 4427 4279 3757 105 0 8 chr5 40729577 40730092 -158900058 - MER9 LTR ERVK 0 511 1 1142 238 67 67 chr5 40730092 40730267 -158899883 - L1ME LINE L1 -2103 4279 1342 2129 119 0 7 chr5 40730815 40731109 -158899041 - AluSg SINE Alu -18 292 1 2234 127 48 20 chr5 40731628 40731982 -158898168 - THE1B LTR MaLR 0 364 1 8189 127 118 17 chr5 40731982 40732289 -158897861 - THE1B-int LTR MaLR 0 1580 1305 2120 108 30 3 chr5 40732289 40732584 -158897566 - AluSx SINE Alu -9 303 1 8189 127 118 17 chr5 40732584 40733712 -158896438 - THE1B-int LTR MaLR -275 1305 1 2183 122 78 23 chr5 40733712 40733750 -158896400 - THE1B LTR MaLR 0 364 330 1507 113 74 58 chr5 40733750 40734007 -158896143 + AluSg SINE Alu 13 273 -37 2183 122 78 23 chr5 40734007 40734313 -158895837 - THE1B LTR MaLR -34 330 1 2098 125 7 0 chr5 40734336 40734624 -158895526 + AluSx SINE Alu 1 290 -22 1567 104 170 4 chr5 40734823 40735082 -158895068 + AluSg SINE Alu 1 302 -8 1208 178 13 18 chr5 40735352 40735518 -158894632 - AluSg/x SINE Alu -12 298 132 2158 126 0 3 chr5 40735518 40735819 -158894331 - AluSx SINE Alu -12 300 1 1208 178 13 18 chr5 40735819 40735877 -158894273 - AluSg/x SINE Alu -178 132 75 2344 86 17 0 chr5 40735886 40736178 -158893972 - AluSp SINE Alu -16 297 1 2255 112 0 0 chr5 40736674 40736968 -158893182 - AluSp SINE Alu -19 294 1 287 349 28 0 chr5 40737094 40737203 -158892947 - L2 LINE L2 -602 2712 2601 2073 120 3 13 chr5 40737500 40737800 -158892350 - AluSx SINE Alu -15 297 1 729 180 0 43 chr5 40738379 40738518 -158891632 + FLAM_C SINE Alu 1 133 0 2224 97 0 27 chr5 40738541 40738840 -158891310 + AluSp SINE Alu 1 291 -22 843 179 61 33 chr5 40738873 40739085 -158891065 + AluJo SINE Alu 85 302 -10 256 288 17 85 chr5 40739142 40739260 -158890890 + MER5A DNA MER1_type 80 189 0 2147 128 3 3 chr5 40739956 40740261 -158889889 + AluSx SINE Alu 1 305 -7 1187 150 5 60 chr5 40740504 40740704 -158889446 - MER5A DNA MER1_type 0 189 1 2168 111 0 10 chr5 40741006 40741303 -158888847 - AluSg SINE Alu -16 294 1 2461 57 3 3 chr5 40741978 40742275 -158887875 - AluY SINE Alu -14 297 1 338 284 56 15 chr5 40743100 40743247 -158886903 + MIR SINE MIR 18 167 -59 24 53 0 0 chr5 40743533 40743571 -158886579 + AT_rich Low_complexity Low_complexity 1 38 0 32 26 0 0 chr5 40743713 40743752 -158886398 + AT_rich Low_complexity Low_complexity 1 39 0 793 206 42 42 chr5 40744010 40744175 -158885975 - FAM SINE Alu -10 165 1 685 168 80 8 chr5 40744220 40744345 -158885805 + L1MB7 LINE L1 5934 6067 -117 7204 55 10 25 chr5 40744466 40746159 -158883991 + SVA Other Other 16 1409 0 1121 107 0 13 chr5 40746336 40746485 -158883665 + AluSq/x SINE Alu 1 147 -165 284 228 0 0 chr5 40746487 40746544 -158883606 + FLAM_A SINE Alu 75 131 -2 1091 158 38 5 chr5 40746570 40746754 -158883396 - AluJo SINE Alu -116 196 7 1815 159 0 3 chr5 40746821 40747125 -158883025 - AluJb SINE Alu 0 303 1 1977 138 3 3 chr5 40747400 40747698 -158882452 + AluSx SINE Alu 1 298 -14 1734 115 77 49 chr5 40749197 40749483 -158880667 + AluSc SINE Alu 1 294 -15 21 36 0 0 chr5 40749570 40749598 -158880552 + AT_rich Low_complexity Low_complexity 1 28 0 1808 87 102 4 chr5 40749600 40749866 -158880284 - L1MA1 LINE L1 -4 6298 6007 1238 173 4 18 chr5 40750094 40750266 -158879884 - AluJb SINE Alu -6 306 136 2284 93 7 10 chr5 40750266 40750567 -158879583 - AluSx SINE Alu -12 300 1 1238 173 4 18 chr5 40750567 40750619 -158879531 - AluJb SINE Alu -176 136 85 393 266 67 110 chr5 40751228 40751530 -158878620 + MLT1J LTR MaLR 51 339 -70 2200 114 3 10 chr5 40751669 40751977 -158878173 - AluSg SINE Alu -4 306 1 1648 174 23 27 chr5 40753107 40753406 -158876744 + AluJb SINE Alu 1 298 -14 2399 96 0 6 chr5 40753409 40753721 -158876429 + AluSx SINE Alu 1 310 -2 354 314 18 47 chr5 40753785 40753954 -158876196 - MIR3 SINE MIR -24 184 21 226 200 62 15 chr5 40754385 40754450 -158875700 + HsTC2 DNA Tc2 915 982 -916 1701 148 3 58 chr5 40754711 40754840 -158875310 + AluJo SINE Alu 7 142 -170 1786 177 7 0 chr5 40754840 40755150 -158875000 + AluSx SINE Alu 1 312 0 1701 148 3 58 chr5 40755150 40755330 -158874820 + AluJo SINE Alu 142 299 -13 1736 164 3 52 chr5 40755550 40755874 -158874276 + AluJo SINE Alu 2 309 -3 2106 119 3 0 chr5 40755911 40756205 -158873945 - AluSg SINE Alu -15 295 1 331 146 0 0 chr5 40756294 40756342 -158873808 + Alu SINE Alu 3 50 -251 2174 141 0 0 chr5 40756356 40756668 -158873482 + AluSx SINE Alu 1 312 0 2297 116 0 3 chr5 40757081 40757392 -158872758 + AluSg SINE Alu 1 310 0 2163 90 12 65 chr5 40757708 40757854 -158872296 + AluSx SINE Alu 1 153 -159 2438 75 13 3 chr5 40757854 40758161 -158871989 + AluY SINE Alu 1 310 -1 2163 90 12 65 chr5 40758161 40758337 -158871813 + AluSx SINE Alu 153 306 -6 1586 138 26 4 chr5 40759208 40759439 -158870711 + AluSg SINE Alu 1 236 -74 1480 196 49 3 chr5 40759492 40759778 -158870372 + AluJo SINE Alu 1 299 -13 241 275 44 44 chr5 40759826 40759917 -158870233 - MIR3 SINE MIR -41 167 77 25 0 0 0 chr5 40760238 40760263 -158869887 + AT_rich Low_complexity Low_complexity 1 25 0 295 253 66 22 chr5 40760337 40760428 -158869722 - MIR3 SINE MIR -4 204 110 272 201 21 167 chr5 40761107 40761173 -158868977 + L1MC5 LINE L1 7110 7145 -816 2098 132 0 3 chr5 40761173 40761483 -158868667 + AluSx SINE Alu 1 309 -3 272 201 21 167 chr5 40761483 40761560 -158868590 + L1MC5 LINE L1 7145 7232 -729 343 254 69 81 chr5 40761668 40762014 -158868136 + L1MC5 LINE L1 7255 7596 -365 1367 144 0 10 chr5 40762065 40762273 -158867877 + AluJb SINE Alu 85 290 -22 2111 105 20 10 chr5 40762585 40762889 -158867261 + AluSx SINE Alu 2 308 -4 291 54 0 0 chr5 40762902 40762939 -158867211 + (TG)n Simple_repeat Simple_repeat 1 37 0 1673 173 3 11 chr5 40762952 40763236 -158866914 - AluJb SINE Alu -30 282 1 21 0 0 0 chr5 40763609 40763630 -158866520 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 40763775 40763797 -158866353 + AT_rich Low_complexity Low_complexity 1 22 0 1711 80 0 13 chr5 40763989 40764213 -158865937 + AluY SINE Alu 1 221 -90 2017 139 0 0 chr5 40764383 40764677 -158865473 + AluSx SINE Alu 1 294 -18 3512 113 87 101 chr5 40764916 40765043 -158865107 + L1MB3 LINE L1 5383 5510 -673 2160 117 10 0 chr5 40765043 40765342 -158864808 + AluSq SINE Alu 1 302 -11 3512 113 87 101 chr5 40765342 40765852 -158864298 + L1MB3 LINE L1 5510 6025 -158 2249 108 0 0 chr5 40765852 40766147 -158864003 - AluSq SINE Alu -18 295 1 3512 113 87 101 chr5 40766147 40766263 -158863887 + L1MB3 LINE L1 6025 6141 -42 2346 89 0 22 chr5 40766263 40766579 -158863571 + AluY SINE Alu 1 309 -2 2238 107 7 3 chr5 40766589 40766899 -158863251 + AluSp SINE Alu 1 311 -2 3512 113 87 101 chr5 40766899 40766944 -158863206 + L1MB3 LINE L1 6150 6183 0 934 179 6 0 chr5 40767071 40767233 -158862917 - AluSg/x SINE Alu -12 300 138 393 192 77 0 chr5 40767497 40767601 -158862549 - L1MB8 LINE L1 -1 6177 6066 419 299 109 58 chr5 40767628 40767848 -158862302 + HAL1 LINE L1 1045 1252 -1255 1224 191 13 13 chr5 40767848 40768079 -158862071 + MER46A DNA MER2_type 2 232 -4 419 299 109 58 chr5 40768079 40768380 -158861770 + HAL1 LINE L1 1252 1593 -914 1529 215 32 29 chr5 40768381 40768757 -158861393 + L1MB8 LINE L1 5802 6178 0 259 164 0 18 chr5 40768841 40768896 -158861254 + L1M4 LINE L1 3877 3930 -2216 1717 180 3 20 chr5 40768966 40769272 -158860878 + AluJb SINE Alu 1 301 -11 1255 208 102 7 chr5 40769288 40769562 -158860588 + AluJo SINE Alu 5 304 -8 2238 87 3 10 chr5 40769579 40769877 -158860273 + AluSp SINE Alu 1 296 -17 1889 166 0 0 chr5 40770450 40770740 -158859410 + AluSx SINE Alu 1 290 -22 2148 96 0 4 chr5 40770823 40771103 -158859047 + AluSc SINE Alu 1 279 -30 2209 97 7 0 chr5 40771250 40771540 -158858610 - AluSp SINE Alu -21 292 1 829 146 8 0 chr5 40771550 40771673 -158858477 - FLAM_C SINE Alu -19 124 1 2503 57 0 0 chr5 40771812 40772109 -158858041 + AluY SINE Alu 1 297 -14 1914 82 0 16 chr5 40772127 40772370 -158857780 + AluSq SINE Alu 55 293 -20 1847 141 0 14 chr5 40772387 40772670 -158857480 + AluSg SINE Alu 1 279 -31 754 171 270 5 chr5 40772670 40772881 -158857269 + L1MB7 LINE L1 5663 5929 -255 376 234 47 0 chr5 40772899 40773070 -158857080 + (TA)n Simple_repeat Simple_repeat 1 179 0 1291 177 28 24 chr5 40773079 40773328 -158856822 + L1MB7 LINE L1 5919 6168 -16 735 246 44 36 chr5 40773662 40773914 -158856236 - L1ME3 LINE L1 -7 6155 5902 1108 217 118 33 chr5 40773949 40774221 -158855929 - AluJo SINE Alu -6 296 2 1833 137 22 4 chr5 40774260 40774531 -158855619 + AluSq SINE Alu 1 276 -37 296 133 0 0 chr5 40774531 40774576 -158855574 + AluSp/q SINE Alu 238 282 -21 434 287 27 40 chr5 40774684 40774834 -158855316 - MIR SINE MIR -75 187 40 1949 157 0 3 chr5 40774873 40775178 -158854972 + AluJb SINE Alu 2 305 -7 1508 238 33 66 chr5 40775722 40776176 -158853974 + MLT1H LTR MaLR 3 441 -108 1825 108 44 30 chr5 40776243 40776538 -158853612 + Tigger2a DNA MER2_type 1 299 -135 321 85 0 0 chr5 40776522 40776569 -158853581 + U7 snRNA snRNA 2 48 -15 * 617 161 125 83 chr5 40776616 40776784 -158853366 + Tigger2a DNA MER2_type 270 444 0 2137 123 0 3 chr5 40777890 40778191 -158851959 - AluSx SINE Alu -12 300 1 303 298 24 0 chr5 40779568 40779652 -158850498 + L2 LINE L2 3227 3312 -1 512 242 222 31 chr5 40779831 40780023 -158850127 - MIR SINE MIR -17 245 7 260 27 27 0 chr5 40780115 40780152 -158849998 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2375 84 0 0 chr5 40780254 40780550 -158849600 + AluY SINE Alu 1 296 -15 2205 98 3 3 chr5 40780678 40780965 -158849185 + AluSp SINE Alu 1 287 -26 284 253 24 12 chr5 40781292 40781375 -158848775 + AluJo SINE Alu 121 204 -98 400 95 0 189 chr5 40781655 40781697 -158848453 + MADE1 DNA Mariner 1 17 -63 1859 57 0 9 chr5 40781697 40781924 -158848226 - AluY SINE Alu -5 306 82 400 95 0 189 chr5 40781924 40781976 -158848174 + MADE1 DNA Mariner 17 77 -3 1505 195 11 3 chr5 40782059 40782371 -158847779 + AluJb SINE Alu 1 312 0 2347 97 3 0 chr5 40782455 40782755 -158847395 + AluSx SINE Alu 1 301 -11 2112 112 41 0 chr5 40783189 40783483 -158846667 - AluSp SINE Alu -7 306 1 1545 183 0 4 chr5 40783490 40783753 -158846397 - AluJb SINE Alu -18 294 33 1975 144 0 10 chr5 40783767 40784066 -158846084 - AluSx SINE Alu -16 296 1 2226 104 7 0 chr5 40784260 40784558 -158845592 + AluSx SINE Alu 1 300 -12 1331 164 19 0 chr5 40784565 40784779 -158845371 + AluJo SINE Alu 84 301 -11 335 288 105 30 chr5 40784808 40785049 -158845101 - L1MC4 LINE L1 -46 7925 7639 1586 166 10 59 chr5 40785049 40785356 -158844794 + AluJb SINE Alu 1 292 -20 335 288 105 30 chr5 40785356 40785488 -158844662 - L1MC4 LINE L1 -332 7639 7518 1290 179 0 0 chr5 40785589 40785790 -158844360 + AluJo SINE Alu 10 210 -102 455 176 69 46 chr5 40785840 40785971 -158844179 - MIR SINE MIR -10 252 119 308 171 11 102 chr5 40787370 40787421 -158842729 - MADE1 DNA Mariner 0 80 39 2233 114 3 0 chr5 40787421 40787719 -158842431 + AluSg SINE Alu 1 299 -11 308 171 11 102 chr5 40787719 40787755 -158842395 - MADE1 DNA Mariner -41 39 1 2538 51 10 0 chr5 40787792 40788086 -158842064 - AluY SINE Alu -14 297 1 304 209 79 40 chr5 40788190 40788283 -158841867 + HsTC2 DNA Tc2 1 1815 -83 22 56 0 0 chr5 40788283 40788319 -158841831 + AT_rich Low_complexity Low_complexity 1 36 0 675 163 17 2 chr5 40788469 40788707 -158841443 + AluJ SINE Alu 2 300 -12 1841 156 0 0 chr5 40788734 40789009 -158841141 + AluJb SINE Alu 8 282 -30 1961 209 20 43 chr5 40789026 40789140 -158841010 + L1M4 LINE L1 4504 4619 -1527 1858 160 17 0 chr5 40789140 40789440 -158840710 - AluSx SINE Alu -7 305 1 1961 209 20 43 chr5 40789440 40789538 -158840612 + L1M4 LINE L1 4619 4718 -1428 1808 154 7 20 chr5 40789538 40789836 -158840314 + AluJb SINE Alu 1 294 -18 1961 209 20 43 chr5 40789836 40790162 -158839988 + L1M4 LINE L1 4718 5031 -1115 1189 164 0 0 chr5 40790188 40790383 -158839767 - L1PA16 LINE L1 -9 6157 5963 1226 106 0 0 chr5 40790748 40790909 -158839241 - AluSg/x SINE Alu -18 292 132 2437 97 0 0 chr5 40790909 40791220 -158838930 - AluY SINE Alu 0 311 1 1638 201 0 41 chr5 40791409 40791727 -158838423 - AluJo SINE Alu -7 305 1 2164 93 0 39 chr5 40792118 40792428 -158837722 - AluSx SINE Alu -14 298 1 2524 80 0 0 chr5 40792442 40792753 -158837397 - AluY SINE Alu 0 311 1 345 298 147 16 chr5 40792880 40792988 -158837162 + L1MC4a LINE L1 7118 7210 -598 2045 147 7 7 chr5 40792988 40793294 -158836856 + AluSx SINE Alu 1 306 -6 345 298 147 16 chr5 40793294 40793437 -158836713 + L1MC4a LINE L1 7210 7402 -406 1874 162 3 10 chr5 40793442 40793750 -158836400 + AluSx SINE Alu 6 311 -1 21 0 0 0 chr5 40793868 40793889 -158836261 + AT_rich Low_complexity Low_complexity 1 21 0 1971 93 100 0 chr5 40793998 40794268 -158835882 + AluSg SINE Alu 1 297 -13 1238 154 128 41 chr5 40794276 40794542 -158835608 + AluJb SINE Alu 5 293 -19 1846 154 0 17 chr5 40794612 40794910 -158835240 + AluJb SINE Alu 10 302 -10 2011 132 0 20 chr5 40795003 40795306 -158834844 + AluSg SINE Alu 2 298 -12 1033 216 14 0 chr5 40795463 40795671 -158834479 + AluJo SINE Alu 87 297 -15 2250 102 3 0 chr5 40795771 40796065 -158834085 + AluSq SINE Alu 5 299 -14 188 268 100 44 chr5 40796123 40796230 -158833920 + MIR SINE MIR 40 145 -63 1904 172 0 0 chr5 40796323 40796625 -158833525 + AluJb SINE Alu 1 302 -10 2427 83 3 3 chr5 40796793 40797095 -158833055 + AluSp SINE Alu 1 302 -11 1878 124 3 60 chr5 40797100 40797235 -158832915 + AluSx SINE Alu 1 142 -171 2171 94 3 7 chr5 40797235 40797521 -158832629 + AluSc SINE Alu 1 285 -24 1878 124 3 60 chr5 40797521 40797715 -158832435 + AluSx SINE Alu 142 313 0 2233 120 0 0 chr5 40798143 40798435 -158831715 - AluSx SINE Alu -19 293 2 1970 134 3 53 chr5 40799901 40800221 -158829929 + AluSx SINE Alu 1 304 -8 2279 90 10 10 chr5 40800830 40801129 -158829021 - AluY SINE Alu -12 299 1 273 75 0 0 chr5 40801239 40801279 -158828871 + (TG)n Simple_repeat Simple_repeat 2 41 0 2046 107 0 44 chr5 40801316 40801451 -158828699 + AluSp SINE Alu 1 140 -174 2139 101 0 7 chr5 40801451 40801728 -158828422 + AluSg SINE Alu 1 275 -35 210 37 0 0 chr5 40801736 40801763 -158828387 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2046 107 0 44 chr5 40801763 40801945 -158828205 + AluSp SINE Alu 147 314 0 625 161 21 118 chr5 40802486 40802694 -158827456 + L1MB3 LINE L1 5643 5829 -354 1718 156 10 10 chr5 40802788 40803076 -158827074 + AluSx SINE Alu 7 294 -18 237 65 0 0 chr5 40803118 40803149 -158827001 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2121 117 0 0 chr5 40803153 40803434 -158826716 - AluY SINE Alu -30 281 1 2402 87 3 3 chr5 40803504 40803804 -158826346 + AluSp SINE Alu 2 301 -12 1869 142 17 10 chr5 40803916 40804211 -158825939 + AluSx SINE Alu 1 297 -15 2146 125 3 3 chr5 40804381 40804686 -158825464 + AluSx SINE Alu 1 305 -7 1719 162 54 10 chr5 40804687 40804983 -158825167 + AluJb SINE Alu 1 309 -3 2285 93 3 0 chr5 40805268 40805557 -158824593 + AluSx SINE Alu 1 290 -22 1491 175 79 10 chr5 40805753 40806044 -158824106 + AluJb SINE Alu 1 311 -1 508 171 0 0 chr5 40806068 40806167 -158823983 - AluSg/x SINE Alu 0 308 210 * 533 123 0 25 chr5 40806160 40806241 -158823909 - AluJb SINE Alu -162 150 72 2171 87 7 3 chr5 40806297 40806583 -158823567 + AluSc SINE Alu 5 291 -18 543 161 125 18 chr5 40806585 40806697 -158823453 + FLAM_C SINE Alu 3 126 -17 48 60 0 0 chr5 40806697 40806780 -158823370 + AT_rich Low_complexity Low_complexity 1 83 0 1026 186 43 103 chr5 40806923 40807430 -158822720 + L1MCc LINE L1 438 985 -4923 1665 147 4 21 chr5 40807430 40807709 -158822441 + AluSx SINE Alu 39 312 0 1026 186 43 103 chr5 40807709 40807744 -158822406 + L1MCc LINE L1 985 1021 -4887 2098 105 3 17 chr5 40807757 40808051 -158822099 + AluSg SINE Alu 1 290 -20 2056 127 28 0 chr5 40808060 40808343 -158821807 + AluSx SINE Alu 1 291 -21 325 119 0 0 chr5 40808354 40808396 -158821754 + Alu SINE Alu 3 44 -258 2132 124 10 0 chr5 40808543 40808842 -158821308 + AluSx SINE Alu 1 302 -10 438 264 123 26 chr5 40808852 40809007 -158821143 + L1MCc LINE L1 1271 1493 -4935 1699 170 109 3 chr5 40809358 40809688 -158820462 + MLT1A1 LTR MaLR 1 365 0 265 315 93 9 chr5 40809700 40809808 -158820342 + L2 LINE L2 3152 3268 -4 2378 78 3 3 chr5 40809848 40810144 -158820006 - AluSp SINE Alu -17 296 1 2202 113 3 7 chr5 40810468 40810770 -158819380 - AluSx SINE Alu -11 301 1 333 241 81 0 chr5 40811196 40811283 -158818867 + MER5A DNA MER1_type 13 106 -83 2359 75 0 0 chr5 40812183 40812492 -158817658 - AluY SINE Alu 0 309 1 1065 98 18 79 chr5 40812507 40812538 -158817612 + L1MA2 LINE L1 6111 6142 -163 1996 118 14 4 chr5 40812538 40812844 -158817306 + AluSg SINE Alu 1 309 0 1065 98 18 79 chr5 40812844 40812986 -158817164 + L1MA2 LINE L1 6142 6291 -14 2204 103 0 19 chr5 40812986 40813296 -158816854 + AluSg SINE Alu 5 308 -2 1065 98 18 79 chr5 40813296 40813309 -158816841 + L1MA2 LINE L1 6291 6275 -30 369 0 0 0 chr5 40813309 40813350 -158816800 + (CA)n Simple_repeat Simple_repeat 2 42 0 1065 98 18 79 chr5 40813350 40813381 -158816769 + L1MA2 LINE L1 6274 6305 0 26 0 0 0 chr5 40813381 40813407 -158816743 + AT_rich Low_complexity Low_complexity 1 26 0 24 53 0 0 chr5 40813871 40813909 -158816241 + AT_rich Low_complexity Low_complexity 1 38 0 1607 113 5 0 chr5 40813996 40814217 -158815933 - AluSg/x SINE Alu -12 298 77 2267 73 38 0 chr5 40814219 40814506 -158815644 - AluY SINE Alu -13 298 1 646 96 0 0 chr5 40814506 40814589 -158815561 - AluSc SINE Alu -225 84 2 1428 173 32 51 chr5 40814596 40814768 -158815382 - AluJb SINE Alu -6 306 132 2030 125 26 13 chr5 40814768 40815071 -158815079 - AluSx SINE Alu -5 307 1 2227 48 4 7 chr5 40815079 40815350 -158814800 - AluY SINE Alu -2 309 40 2165 112 3 0 chr5 40815350 40815637 -158814513 - AluSg SINE Alu -22 288 1 1428 173 32 51 chr5 40815637 40815766 -158814384 - AluJb SINE Alu -185 127 1 1757 148 0 44 chr5 40815766 40816064 -158814086 - AluJb SINE Alu -2 310 26 1895 137 27 3 chr5 40816094 40816387 -158813763 + AluSx SINE Alu 1 300 -12 1726 174 13 3 chr5 40816528 40816832 -158813318 + AluJo SINE Alu 1 307 -5 2205 86 10 13 chr5 40817645 40817947 -158812203 + AluSq SINE Alu 1 301 -12 225 127 28 56 chr5 40818836 40818907 -158811243 + GA-rich Low_complexity Low_complexity 5 73 0 459 231 116 0 chr5 40820084 40820205 -158809945 + MER58B DNA MER1_type 206 340 -1 1170 177 76 48 chr5 40820230 40820378 -158809772 - Charlie1 DNA MER1_type -15 2746 2604 2208 106 3 23 chr5 40820378 40820681 -158809469 + AluSg SINE Alu 1 297 -13 1170 177 76 48 chr5 40820681 40820841 -158809309 - Charlie1 DNA MER1_type -157 2604 2429 488 190 30 32 chr5 40820841 40821018 -158809132 - LTR64 LTR ERVK 0 558 346 497 237 0 0 chr5 40821025 40821118 -158809032 + AluJ/FLAM SINE Alu 3 95 -217 1067 149 48 0 chr5 40821118 40821286 -158808864 + AluJo/FRAM SINE Alu 136 311 -1 1582 189 15 30 chr5 40821286 40821614 -158808536 - LTR64 LTR ERVK -235 323 1 226 211 14 169 chr5 40821614 40821679 -158808471 - Charlie1 DNA MER1_type -341 2420 2382 2285 119 0 0 chr5 40821679 40821990 -158808160 + AluSq SINE Alu 3 313 0 226 211 14 169 chr5 40821990 40822035 -158808115 - Charlie1 DNA MER1_type -379 2382 2332 * 1580 231 59 30 chr5 40822026 40822056 -158808094 - Charlie1 DNA MER1_type -832 1929 1901 2015 124 24 3 chr5 40822056 40822201 -158807949 - AluSq SINE Alu -16 297 156 2273 104 10 10 chr5 40822201 40822510 -158807640 - AluSq SINE Alu -4 309 1 2015 124 24 3 chr5 40822510 40822655 -158807495 - AluSq SINE Alu -157 156 1 1580 231 59 30 chr5 40822655 40822841 -158807309 - Charlie1 DNA MER1_type -860 1901 1722 938 199 0 12 chr5 40822841 40823007 -158807143 + FAM SINE Alu 1 164 -11 1580 231 59 30 chr5 40823007 40823227 -158806923 - Charlie1 DNA MER1_type -1039 1722 1479 513 234 29 58 chr5 40823363 40823500 -158806650 + MER54A LTR ERVL 484 616 -285 1175 86 103 0 chr5 40823503 40823678 -158806472 - MER30 DNA MER1_type -35 195 3 1743 194 7 0 chr5 40823678 40823972 -158806178 + MER54A LTR ERVL 599 894 -7 2185 105 3 10 chr5 40823973 40824279 -158805871 + AluSp SINE Alu 1 304 -9 1565 118 3 84 chr5 40824318 40824605 -158805545 + MER75 DNA T2_type 1 264 -250 1991 138 3 3 chr5 40824844 40824980 -158805170 + AluSx SINE Alu 1 136 -176 2290 92 14 0 chr5 40824980 40825274 -158804876 + AluSx SINE Alu 1 298 -14 1991 138 3 3 chr5 40825274 40825428 -158804722 + AluSx SINE Alu 135 291 -21 1480 124 22 137 chr5 40825533 40825855 -158804295 + AluYb8 SINE Alu 1 285 -33 216 0 0 0 chr5 40825855 40825879 -158804271 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2292 94 7 10 chr5 40825882 40826190 -158803960 + AluSx SINE Alu 1 307 -5 2232 77 14 3 chr5 40826201 40826488 -158803662 + AluSx SINE Alu 20 309 -3 1107 92 104 0 chr5 40826499 40826663 -158803487 + AluSg/x SINE Alu 121 301 -11 264 246 23 154 chr5 40827330 40827635 -158802515 - L1ME LINE L1 -379 5742 5478 2386 67 0 13 chr5 40827898 40828198 -158801952 - AluY SINE Alu -15 296 1 1720 174 24 3 chr5 40828198 40828496 -158801654 - AluJb SINE Alu -6 306 3 675 186 335 13 chr5 40828631 40828867 -158801283 - MLT1E2 LTR MaLR -228 398 87 1968 145 3 0 chr5 40829328 40829632 -158800518 + AluSq SINE Alu 1 305 -8 2273 105 0 3 chr5 40829658 40829954 -158800196 - AluSg SINE Alu -15 295 1 233 0 62 0 chr5 40829954 40829986 -158800164 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2057 120 22 0 chr5 40829986 40830260 -158799890 - AluSc SINE Alu -29 280 1 2021 134 0 0 chr5 40830287 40830599 -158799551 + AluSq SINE Alu 1 312 0 301 86 35 0 chr5 40830624 40830682 -158799468 + A-rich Low_complexity Low_complexity 1 60 0 2222 101 0 7 chr5 40830822 40831118 -158799032 - AluSx SINE Alu -18 294 1 2250 82 0 14 chr5 40831147 40831438 -158798712 - AluY SINE Alu -23 288 2 531 238 165 29 chr5 40831459 40831665 -158798485 - L1MC5 LINE L1 -51 7910 7677 1602 178 0 45 chr5 40831730 40831943 -158798207 - AluJb SINE Alu -5 307 111 2543 50 27 3 chr5 40831943 40832244 -158797906 + AluY SINE Alu 1 308 -3 1602 178 0 45 chr5 40832244 40832339 -158797811 - AluJb SINE Alu -201 111 13 2353 198 166 64 chr5 40832346 40832794 -158797356 - MER21B LTR ERV1 -60 803 253 1928 150 16 13 chr5 40832794 40833100 -158797050 + AluJo SINE Alu 1 307 -5 2353 198 166 64 chr5 40833100 40833367 -158796783 - MER21B LTR ERV1 -610 253 15 2239 81 0 34 chr5 40833372 40833669 -158796481 - AluY SINE Alu -24 287 1 1626 126 4 4 chr5 40833920 40834150 -158796000 - AluSx SINE Alu -48 264 35 21 0 0 0 chr5 40834154 40834175 -158795975 + AT_rich Low_complexity Low_complexity 1 21 0 269 91 0 0 chr5 40834175 40834219 -158795931 - L1MA3 LINE L1 0 6305 6262 2223 114 0 3 chr5 40834372 40834670 -158795480 + AluSq SINE Alu 1 297 -16 22 0 0 0 chr5 40834878 40834900 -158795250 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr5 40834957 40834986 -158795164 + AT_rich Low_complexity Low_complexity 1 29 0 323 200 114 0 chr5 40835270 40835340 -158794810 + MER21B LTR ERV1 497 574 -289 2258 95 10 3 chr5 40835676 40835972 -158794178 - AluSg SINE Alu -12 298 1 2100 134 3 7 chr5 40836012 40836319 -158793831 + AluSx SINE Alu 1 306 -6 707 133 125 17 chr5 40836347 40836467 -158793683 + FLAM_C SINE Alu 6 138 -5 1996 130 7 10 chr5 40836643 40836950 -158793200 - AluSx SINE Alu -6 306 1 2329 81 0 7 chr5 40836959 40837267 -158792883 - AluY SINE Alu -4 307 2 22 0 0 0 chr5 40837741 40837763 -158792387 + AT_rich Low_complexity Low_complexity 1 22 0 518 84 0 0 chr5 40837815 40837886 -158792264 - MER41B LTR ERV1 -84 551 481 2349 77 0 3 chr5 40837897 40838194 -158791956 - AluY SINE Alu -13 298 3 2354 94 3 0 chr5 40838274 40838572 -158791578 - AluSp SINE Alu -14 299 1 25 51 0 0 chr5 40838808 40838847 -158791303 + AT_rich Low_complexity Low_complexity 1 39 0 2928 166 28 18 chr5 40838872 40839415 -158790735 - L1MB3 LINE L1 -77 6106 5559 2145 103 7 7 chr5 40839734 40840026 -158790124 - AluSx SINE Alu -6 306 15 1132 144 23 0 chr5 40840027 40840200 -158789950 - AluSg SINE Alu -133 177 1 2149 97 3 10 chr5 40840212 40840500 -158789650 - AluSg SINE Alu -23 287 2 1316 220 56 16 chr5 40840547 40840591 -158789559 - L1 LINE L1 -2919 3227 3186 2214 112 3 0 chr5 40840591 40840895 -158789255 - AluSg SINE Alu -4 306 2 1316 220 56 16 chr5 40840895 40841239 -158788911 - L1 LINE L1 -2960 3186 2818 1814 171 0 10 chr5 40841239 40841538 -158788612 - AluJb SINE Alu -16 296 1 1316 220 56 16 chr5 40841538 40841580 -158788570 - L1 LINE L1 -3328 2818 2779 1892 117 68 0 chr5 40841581 40841862 -158788288 + AluSg SINE Alu 1 300 -10 796 310 85 48 chr5 40841948 40842383 -158787767 - L2 LINE L2 -1 3312 2862 327 274 39 49 chr5 40842540 40842642 -158787508 - L2 LINE L2 -22 3291 3191 1354 87 71 0 chr5 40842874 40843058 -158787092 - MER107 DNA MER1_type 0 197 1 36 0 0 0 chr5 40843332 40843368 -158786782 + AT_rich Low_complexity Low_complexity 1 36 0 1659 191 14 0 chr5 40843373 40843655 -158786495 - AluJo SINE Alu -26 286 1 23 0 0 0 chr5 40843801 40843824 -158786326 + AT_rich Low_complexity Low_complexity 1 23 0 330 115 0 0 chr5 40844076 40844128 -158786022 + (GAA)n Simple_repeat Simple_repeat 1 52 0 1055 136 12 6 chr5 40844240 40844402 -158785748 + AluSc SINE Alu 135 297 -12 1651 155 32 7 chr5 40844418 40844696 -158785454 + AluJo SINE Alu 1 285 -27 1187 110 6 6 chr5 40844879 40845043 -158785107 + AluSp SINE Alu 137 300 -13 2242 81 20 14 chr5 40845269 40845564 -158784586 + AluSc SINE Alu 1 297 -12 2379 67 10 3 chr5 40845644 40845941 -158784209 - AluY SINE Alu -12 299 1 344 244 11 22 chr5 40845942 40846032 -158784118 - MER97a DNA MER1_type? -24 870 782 1621 133 92 19 chr5 40846416 40846553 -158783597 + AluSx SINE Alu 1 126 -186 2445 70 0 0 chr5 40846553 40846852 -158783298 + AluY SINE Alu 1 299 -12 1621 133 92 19 chr5 40846852 40846985 -158783165 + AluSx SINE Alu 126 291 -21 1679 197 114 49 chr5 40847211 40847470 -158782680 - MER97a DNA MER1_type? -324 570 329 2170 105 0 3 chr5 40847470 40847790 -158782360 - AluSx SINE Alu 0 319 1 1679 197 114 49 chr5 40847790 40848022 -158782128 - MER97a DNA MER1_type? -565 329 46 786 236 28 11 chr5 40848123 40848301 -158781849 + MLT1B LTR MaLR 210 390 0 1725 151 16 40 chr5 40848560 40848864 -158781286 - AluJo SINE Alu -15 297 1 2399 86 0 7 chr5 40848873 40849174 -158780976 - AluSx SINE Alu -13 299 1 711 200 31 8 chr5 40849183 40849313 -158780837 - AluJo SINE Alu -178 134 2 3530 166 50 15 chr5 40849351 40849850 -158780300 - L1MA5 LINE L1 -2 6298 5767 315 0 0 0 chr5 40849850 40849885 -158780265 + (TG)n Simple_repeat Simple_repeat 2 36 0 3530 166 50 15 chr5 40849885 40850058 -158780092 - L1MA5 LINE L1 -533 5767 5602 1762 192 41 28 chr5 40850065 40850455 -158779695 - L1MA4 LINE L1 -11 6289 5895 279 133 0 0 chr5 40850455 40850500 -158779650 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 2110 129 0 3 chr5 40850501 40850804 -158779346 - AluSx SINE Alu -10 302 1 197 371 26 17 chr5 40850902 40851018 -158779132 + L2 LINE L2 2601 2717 -597 1446 181 16 80 chr5 40851283 40851597 -158778553 - AluJo SINE Alu -18 294 1 236 259 42 121 chr5 40851602 40851768 -158778382 - MER5B DNA MER1_type -1 177 25 27 29 0 0 chr5 40852254 40852288 -158777862 + AT_rich Low_complexity Low_complexity 1 34 0 462 259 30 15 chr5 40852343 40852474 -158777676 + L1ME4a LINE L1 5588 5720 -401 332 321 43 14 chr5 40852641 40852781 -158777369 + L1ME4a LINE L1 5711 5854 -267 1181 141 0 0 chr5 40852893 40853070 -158777080 - AluSp SINE Alu 0 313 137 1735 189 14 3 chr5 40853320 40853611 -158776539 + AluJb SINE Alu 1 294 -18 467 260 100 35 chr5 40853735 40853935 -158776215 + L2 LINE L2 2440 2652 -662 765 230 113 25 chr5 40853991 40854230 -158775920 + MIR SINE MIR 2 261 -1 541 106 35 47 chr5 40854634 40854719 -158775431 + FRAM SINE Alu 67 150 -26 1629 160 20 33 chr5 40854793 40855093 -158775057 + AluSx SINE Alu 1 296 -16 800 156 0 8 chr5 40855252 40855374 -158774776 - FLAM_C SINE Alu -11 132 12 707 273 64 26 chr5 40855478 40855742 -158774408 - MLT1J LTR MaLR 0 511 238 2077 122 0 20 chr5 40855746 40856049 -158774101 + AluSx SINE Alu 1 297 -15 2371 87 3 0 chr5 40856496 40856795 -158773355 - AluSq SINE Alu -13 300 1 2210 103 0 3 chr5 40857062 40857362 -158772788 - AluSq SINE Alu -14 299 1 1192 171 108 87 chr5 40857608 40857895 -158772255 - AluJo SINE Alu -9 293 1 713 220 7 7 chr5 40858676 40858817 -158771333 - FLAM_C SINE Alu -2 141 1 601 243 26 7 chr5 40858818 40858970 -158771180 - L1ME2 LINE L1 -10 6154 6000 2007 142 0 14 chr5 40859000 40859295 -158770855 + AluSx SINE Alu 1 291 -21 36 62 0 0 chr5 40859458 40859522 -158770628 + AT_rich Low_complexity Low_complexity 1 64 0 2219 96 0 3 chr5 40859661 40859970 -158770180 + AluSx SINE Alu 1 308 0 2265 101 0 3 chr5 40860997 40861294 -158768856 + AluSc SINE Alu 1 296 -13 2366 95 7 0 chr5 40861421 40861725 -158768425 + AluSp SINE Alu 2 307 -6 1127 282 126 18 chr5 40861726 40862253 -158767897 + L2 LINE L2 2707 3312 -1 6388 57 32 50 chr5 40862338 40864123 -158766027 - SVA Other Other -589 1386 1 1950 139 24 0 chr5 40864138 40864432 -158765718 - AluSx SINE Alu -11 301 1 209 224 82 0 chr5 40864596 40864645 -158765505 - L2 LINE L2 -5 3267 3215 1990 158 0 3 chr5 40864778 40865082 -158765068 - AluJb SINE Alu -9 303 1 1786 159 0 33 chr5 40865098 40865400 -158764750 - AluJo SINE Alu -16 296 5 207 0 0 0 chr5 40865764 40865787 -158764363 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 25 31 0 0 chr5 40865809 40865841 -158764309 + AT_rich Low_complexity Low_complexity 1 32 0 1811 46 14 5 chr5 40865888 40866104 -158764046 - AluY SINE Alu -23 288 71 1993 138 6 16 chr5 40866310 40866621 -158763529 - AluSx SINE Alu -4 308 1 2155 115 3 0 chr5 40866766 40867061 -158763089 - AluSg SINE Alu -14 296 1 1944 132 24 3 chr5 40867089 40867376 -158762774 + AluSx SINE Alu 1 293 -19 817 168 0 0 chr5 40867470 40867595 -158762555 - FLAM_C SINE Alu -8 125 1 795 171 29 14 chr5 40867638 40867778 -158762372 + FLAM_C SINE Alu 2 143 0 1252 213 37 0 chr5 40867988 40868232 -158761918 - AluJo SINE Alu -4 308 56 1766 112 50 8 chr5 40868233 40868492 -158761658 + AluSg SINE Alu 35 304 -6 732 284 49 16 chr5 40868534 40868777 -158761373 - MIR SINE MIR -9 253 3 1813 148 3 56 chr5 40869839 40870015 -158760135 - AluJb SINE Alu -5 307 154 2155 118 0 31 chr5 40870015 40870337 -158759813 - AluSx SINE Alu 0 312 1 1813 148 3 56 chr5 40870337 40870484 -158759666 - AluJb SINE Alu -158 154 1 259 356 8 25 chr5 40870732 40870850 -158759300 - MIR SINE MIR -55 153 38 263 271 0 0 chr5 40870903 40870973 -158759177 + A-rich Low_complexity Low_complexity 1 70 0 2089 123 7 7 chr5 40871109 40871418 -158758732 - AluSg SINE Alu -1 309 1 2322 100 0 0 chr5 40871432 40871733 -158758417 + AluSx SINE Alu 10 310 -2 23 33 0 0 chr5 40871736 40871766 -158758384 + AT_rich Low_complexity Low_complexity 1 30 0 1840 170 3 22 chr5 40871954 40872265 -158757885 - AluJo SINE Alu -7 305 1 1426 259 201 42 chr5 40872378 40872518 -158757632 - L2 LINE L2 -10 3303 3187 1816 167 0 22 chr5 40872518 40872830 -158757320 + AluJb SINE Alu 1 305 -7 1426 259 201 42 chr5 40872830 40873822 -158756328 - L2 LINE L2 -126 3187 1939 415 284 90 7 chr5 40873935 40874233 -158755917 - MLT1H LTR MaLR 0 549 214 1500 181 79 0 chr5 40874349 40874626 -158755524 - AluJb SINE Alu -13 299 1 2493 71 0 0 chr5 40874664 40874973 -158755177 + AluY SINE Alu 1 309 -2 240 259 94 0 chr5 40874977 40875062 -158755088 - L1MCa LINE L1 -4339 2087 1995 1902 97 62 38 chr5 40875150 40875438 -158754712 + AluSq SINE Alu 1 295 -18 532 307 26 0 chr5 40875440 40875593 -158754557 + MLT1J LTR MaLR 106 262 -249 2970 220 72 43 chr5 40875824 40876568 -158753582 - L1ME1 LINE L1 -4 6162 5441 565 246 8 8 chr5 40876568 40876690 -158753460 - FLAM_A SINE Alu -11 122 1 2970 220 72 43 chr5 40876690 40877668 -158752482 - L1ME1 LINE L1 -725 5441 4381 2339 104 3 0 chr5 40878106 40878415 -158751735 - AluSx SINE Alu -1 311 2 1766 150 0 0 chr5 40878443 40878710 -158751440 - AluSx SINE Alu -45 267 1 264 297 158 0 chr5 40878734 40878835 -158751315 + L2 LINE L2 3189 3305 -8 4984 155 17 11 chr5 40879107 40879947 -158750203 - L1MB2 LINE L1 -4 6167 5323 2298 69 0 33 chr5 40879947 40880252 -158749898 - AluSc SINE Alu -14 295 1 975 93 6 80 chr5 40880257 40880419 -158749731 - AluY SINE Alu -161 150 1 517 224 17 58 chr5 40880420 40880594 -158749556 - L1MB2 LINE L1 -816 5330 5164 2006 149 17 0 chr5 40880622 40880917 -158749233 - AluSx SINE Alu -12 300 1 437 200 19 48 chr5 40881042 40881147 -158749003 + MER2 DNA MER2_type 22 123 -222 1869 145 73 28 chr5 40881543 40881901 -158748249 - THE1C LTR MaLR -1 374 1 297 328 17 34 chr5 40883615 40883734 -158746416 - L2 LINE L2 -188 3084 2968 386 248 172 35 chr5 40883790 40883988 -158746162 - MIR SINE MIR -1 261 37 336 269 13 0 chr5 40884120 40884198 -158745952 - L2 LINE L2 -1 3271 3193 299 209 0 15 chr5 40886195 40886262 -158743888 + L1MEc LINE L1 821 886 -5510 817 155 89 78 chr5 40886262 40886467 -158743683 + Charlie1 DNA MER1_type 2488 2689 -72 184 42 0 0 chr5 40886467 40886491 -158743659 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2236 85 0 3 chr5 40886491 40886774 -158743376 - AluY SINE Alu -1 305 1 817 155 89 78 chr5 40886774 40886838 -158743312 + Charlie1 DNA MER1_type 2688 2761 0 354 280 112 24 chr5 40937048 40937276 -158692874 - MSTA LTR MaLR -180 248 1 1293 189 14 104 chr5 40937359 40937514 -158692636 - L1 LINE L1 -2391 3755 3588 2886 110 2 22 chr5 40937514 40937931 -158692219 - L1PA12 LINE L1 0 6168 5760 1293 189 14 104 chr5 40937931 40938240 -158691910 - L1 LINE L1 -2558 3588 3300 734 242 21 52 chr5 40938284 40938611 -158691539 - L1M4 LINE L1 -1083 5063 4747 5529 170 92 19 chr5 40941320 40941408 -158688742 + L1PB3 LINE L1 3752 3832 -2322 2099 180 70 5 chr5 40941408 40941808 -158688342 + MSTA LTR MaLR 1 426 -2 5529 170 92 19 chr5 40941808 40942810 -158687340 + L1PB3 LINE L1 3832 4760 -1394 1202 129 144 0 chr5 40942810 40943011 -158687139 - MER30 DNA MER1_type 0 230 1 5529 170 92 19 chr5 40943011 40943375 -158686775 + L1PB3 LINE L1 4760 5096 -1058 2371 81 0 40 chr5 40943375 40943697 -158686453 + AluSq SINE Alu 1 309 -4 5529 170 92 19 chr5 40943697 40944458 -158685692 + L1PB3 LINE L1 5096 6147 -7 269 212 121 20 chr5 40944474 40944573 -158685577 + L1MC/D LINE L1 5106 5214 -932 1220 150 68 5 chr5 40944573 40944780 -158685370 + AluJb SINE Alu 13 232 -80 378 0 0 0 chr5 40944784 40944826 -158685324 + (GA)n Simple_repeat Simple_repeat 1 42 0 24 0 0 0 chr5 40944867 40944891 -158685259 + AT_rich Low_complexity Low_complexity 1 24 0 1782 172 28 23 chr5 40944945 40945000 -158685150 + L1MC/D LINE L1 5328 5381 -2404 2231 121 0 0 chr5 40945000 40945298 -158684852 + AluSx SINE Alu 1 298 -14 1782 172 28 23 chr5 40945298 40945632 -158684518 + L1MC/D LINE L1 5381 5719 -2066 1562 285 76 16 chr5 40945653 40946207 -158683943 - L2 LINE L2 -804 2510 1924 2056 160 0 0 chr5 40946292 40946604 -158683546 + AluSx SINE Alu 1 312 0 24 0 0 0 chr5 40946721 40946745 -158683405 + AT_rich Low_complexity Low_complexity 1 24 0 588 103 22 71 chr5 40946863 40947047 -158683103 + (GGGAA)n Simple_repeat Simple_repeat 2 176 0 215 244 39 26 chr5 40947049 40947127 -158683023 + GA-rich Low_complexity Low_complexity 2 80 0 2519 251 106 43 chr5 40947743 40947869 -158682281 - L1M4 LINE L1 -1419 4727 4610 1704 180 29 3 chr5 40947869 40948213 -158681937 - L1MA4A LINE L1 -7 6296 5944 2519 251 106 43 chr5 40948213 40948769 -158681381 - L1M4 LINE L1 -1536 4610 4090 1429 169 130 32 chr5 40948769 40949107 -158681043 + MLT1A2 LTR MaLR 4 374 0 2519 251 106 43 chr5 40949107 40949802 -158680348 - L1M4 LINE L1 -2056 4090 3217 673 198 209 4 chr5 40949816 40950079 -158680071 - L1M4 LINE L1 -3050 3096 2780 481 177 0 0 chr5 40950089 40950168 -158679982 - AluJ/FLAM SINE Alu -233 79 1 352 218 45 18 chr5 40950174 40950284 -158679866 - L1M4 LINE L1 -3357 2789 2677 186 342 40 53 chr5 40950284 40950436 -158679714 + L2 LINE L2 2552 2701 -613 1000 193 5 25 chr5 40950505 40950702 -158679448 + AluJo SINE Alu 85 277 -35 254 248 26 43 chr5 40950751 40950868 -158679282 - L1MC4 LINE L1 -2 8040 7926 214 184 0 0 chr5 40950952 40950990 -158679160 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 4451 235 88 16 chr5 40950990 40951111 -158679039 - L1MC4 LINE L1 -128 7914 7803 736 188 0 8 chr5 40951111 40951239 -158678911 - FLAM_A SINE Alu -5 128 2 4451 235 88 16 chr5 40951239 40952579 -158677571 - L1MC4 LINE L1 -239 7803 6348 826 255 89 64 chr5 40952591 40952870 -158677280 - MLT1C LTR MaLR 0 467 196 1928 151 14 0 chr5 40952870 40953161 -158676989 - AluJb SINE Alu -17 295 1 826 255 89 64 chr5 40953161 40953226 -158676924 - MLT1C LTR MaLR -271 196 134 1854 163 0 10 chr5 40953226 40953527 -158676623 - AluJb SINE Alu -14 298 1 826 255 89 64 chr5 40953527 40953632 -158676518 - MLT1C LTR MaLR -333 134 6 409 221 107 0 chr5 40953676 40953807 -158676343 - L1MC4a LINE L1 -1541 6267 6123 427 358 40 5 chr5 40953894 40954165 -158675985 - L2 LINE L2 -244 3069 2791 3345 62 25 0 chr5 40954165 40954598 -158675552 - MLT2A1 LTR ERVL 0 444 1 1386 235 3 20 chr5 40954663 40954957 -158675193 - AluJo SINE Alu -18 294 6 237 159 0 0 chr5 40954979 40955023 -158675127 + (TA)n Simple_repeat Simple_repeat 1 44 0 1908 107 17 14 chr5 40955023 40955314 -158674836 - L1PA11 LINE L1 -2 6172 5881 514 279 96 122 chr5 40955317 40955381 -158674769 - L2 LINE L2 -605 2709 2645 2159 122 3 3 chr5 40955381 40955684 -158674466 + AluJb SINE Alu 5 307 -5 514 279 96 122 chr5 40955684 40956078 -158674072 - L2 LINE L2 -669 2645 2263 183 273 15 76 chr5 40956897 40956963 -158673187 - L2 LINE L2 -21 3251 3190 182 36 0 36 chr5 40957348 40957368 -158672782 + (TA)n Simple_repeat Simple_repeat 2 22 -6 2200 118 3 3 chr5 40957368 40957664 -158672486 - AluSx SINE Alu -16 296 1 182 36 0 36 chr5 40957664 40957671 -158672479 + (TA)n Simple_repeat Simple_repeat 22 28 0 2304 111 3 0 chr5 40958012 40958309 -158671841 - AluSq SINE Alu -15 298 1 973 95 82 0 chr5 40958323 40958481 -158671669 - L1MA2 LINE L1 0 6304 6134 246 70 70 0 chr5 40958486 40958543 -158671607 + (TTATA)n Simple_repeat Simple_repeat 2 62 0 2066 158 0 0 chr5 40958546 40958857 -158671293 - AluSq SINE Alu -2 311 1 2714 133 9 4 chr5 40958857 40959323 -158670827 - L1MA1 LINE L1 -156 6146 5679 6011 98 37 29 chr5 40959324 40960263 -158669887 - SVA Other Other 0 1386 440 437 242 39 55 chr5 40960478 40960606 -158669544 + MIR3 SINE MIR 68 193 -15 2510 97 27 16 chr5 40960879 40961250 -158668900 + THE1C LTR MaLR 1 375 0 3592 185 102 13 chr5 40961276 40962179 -158667971 + L1MC4a LINE L1 6824 7806 -2 1944 104 63 0 chr5 40962187 40962507 -158667643 + AluSx SINE Alu 1 337 0 389 306 122 36 chr5 40962917 40963113 -158667037 + LTR67 LTR ERVL 109 321 -236 495 245 179 66 chr5 40963444 40963656 -158666494 + MIR SINE MIR 2 237 -25 234 0 0 0 chr5 40964647 40964673 -158665477 + (TTG)n Simple_repeat Simple_repeat 2 27 0 829 293 70 4 chr5 40964973 40965215 -158664935 - MIR SINE MIR 0 262 5 22 0 0 0 chr5 40965271 40965293 -158664857 + AT_rich Low_complexity Low_complexity 1 22 0 1621 145 40 25 chr5 40966257 40966533 -158663617 - AluSx SINE Alu -32 280 1 2303 118 0 0 chr5 40966540 40966844 -158663306 - AluSx SINE Alu -8 304 1 1066 97 13 0 chr5 40967530 40967685 -158662465 - L1MA3 LINE L1 0 7724 7568 14622 152 28 18 chr5 40967691 40972992 -158657158 - L1MA3 LINE L1 -717 7007 1652 835 159 111 53 chr5 40972992 40973199 -158656951 - THE1B LTR MaLR -145 219 1 200 220 68 51 chr5 40973387 40973446 -158656704 + L2 LINE L2 3199 3258 -55 205 253 33 113 chr5 40974677 40974827 -158655323 + MIR SINE MIR 84 221 -41 29890 98 9 29 chr5 40975288 40981777 -158648373 - L1PA7 LINE L1 -2 6467 1 197 352 125 16 chr5 40982071 40982199 -158647951 + L2 LINE L2 2799 2940 -374 1469 186 89 24 chr5 40982200 40982340 -158647810 - Tigger2a DNA MER2_type -2314 394 265 229 48 71 0 chr5 40982340 40982382 -158647768 + (TAAAG)n Simple_repeat Simple_repeat 3 47 0 1469 186 89 24 chr5 40982382 40982611 -158647539 - Tigger2a DNA MER2_type -2443 265 1 437 325 26 21 chr5 40982742 40982933 -158647217 + L2 LINE L2 2891 3082 -190 1943 216 79 65 chr5 40983716 40983887 -158646263 - L1M4 LINE L1 -2970 3176 3009 1497 181 53 58 chr5 40983887 40984263 -158645887 - MLT1A2 LTR MaLR 0 374 1 1943 216 79 65 chr5 40984263 40985086 -158645064 - L1M4 LINE L1 -3137 3009 2168 365 237 114 23 chr5 40985109 40985120 -158645030 - MER3 DNA MER1_type -30 179 170 1294 196 92 6 chr5 40985120 40985437 -158644713 - MER2 DNA MER2_type 0 344 1 365 237 114 23 chr5 40985437 40985556 -158644594 - MER3 DNA MER1_type -39 170 37 2652 160 41 105 chr5 40985784 40986490 -158643660 - LTR8 LTR ERV1 -30 661 1 246 203 101 0 chr5 40986916 40986985 -158643165 - Charlie8 DNA MER1_type -2217 200 125 282 311 87 0 chr5 40987261 40987364 -158642786 + L2 LINE L2 3190 3301 -12 412 356 40 28 chr5 40988439 40988692 -158641458 + L2 LINE L2 2600 2855 -459 358 257 83 42 chr5 40988987 40989131 -158641019 + L2 LINE L2 3123 3272 0 951 274 24 8 chr5 40991074 40991329 -158638821 + MIR SINE MIR 4 262 0 278 251 52 11 chr5 40991583 40991690 -158638460 + MIR SINE MIR 94 203 -59 958 206 5 15 chr5 40991894 40992093 -158638057 + MER58A DNA MER1_type 24 220 -4 234 0 0 0 chr5 40992166 40992192 -158637958 + (A)n Simple_repeat Simple_repeat 1 26 0 276 170 134 98 chr5 40992194 40992306 -158637844 + MER103 DNA DNA 2 117 -49 237 83 0 0 chr5 40992379 40992415 -158637735 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 189 286 36 0 chr5 40993352 40993408 -158636742 + L2 LINE L2 3211 3268 -4 200 206 0 0 chr5 40993654 40993688 -158636462 + polypurine Low_complexity Low_complexity 3 36 0 23 33 0 0 chr5 40993705 40993735 -158636415 + AT_rich Low_complexity Low_complexity 1 30 0 659 146 0 9 chr5 40993737 40993847 -158636303 - FRAM SINE Alu -16 160 52 631 229 29 0 chr5 40993916 40994091 -158636059 - LTR16B LTR ERVL 0 464 285 2021 186 16 21 chr5 40994091 40994516 -158635634 + L1MB8 LINE L1 5744 6166 -12 432 83 56 0 chr5 40994720 40994792 -158635358 - SVA Other Other -877 509 434 1279 124 0 0 chr5 40994793 40994987 -158635163 - L1M1 LINE L1 -612 5692 5499 25 31 0 0 chr5 40995448 40995480 -158634670 + AT_rich Low_complexity Low_complexity 1 32 0 538 365 52 7 chr5 40995616 40995926 -158634224 + L1M4 LINE L1 3762 4085 -2061 22 35 0 0 chr5 40996365 40996394 -158633756 + AT_rich Low_complexity Low_complexity 1 29 0 4760 107 30 16 chr5 40996398 40996757 -158633393 - L1PB1 LINE L1 -1 6866 6513 354 23 0 0 chr5 40996757 40996800 -158633350 + (CA)n Simple_repeat Simple_repeat 2 44 0 4760 107 30 16 chr5 40996800 40997242 -158632908 - L1PB1 LINE L1 -354 6513 6054 2196 132 3 0 chr5 40997244 40997548 -158632602 + AluY SINE Alu 1 305 -6 39697 62 3 1 chr5 40997558 41003692 -158626458 + L1PA5 LINE L1 11 6150 -4 12009 163 57 40 chr5 41003692 41008368 -158621782 - L1PB1 LINE L1 -804 6058 1464 757 149 33 0 chr5 41008368 41008489 -158621661 + AluSq/x SINE Alu 1 125 -188 12009 163 57 40 chr5 41008489 41008512 -158621638 - L1PB1 LINE L1 -5398 1464 1443 405 0 0 0 chr5 41008512 41008557 -158621593 + (CCA)n Simple_repeat Simple_repeat 3 47 0 12009 163 57 40 chr5 41008557 41009021 -158621129 - L1PB1 LINE L1 -5419 1443 625 505 198 9 0 chr5 41009013 41009124 -158621026 - L1PB1 LINE L1 -6663 200 89 * 545 131 0 0 chr5 41009119 41009203 -158620947 + L1PBa LINE L1 1391 1474 -5389 496 134 0 0 chr5 41009230 41009312 -158620838 - L1PB1 LINE L1 -6779 84 3 2013 93 68 4 chr5 41009554 41009833 -158620317 - AluSx SINE Alu -15 297 1 510 291 80 99 chr5 41010082 41010494 -158619656 - L2 LINE L2 -91 3222 2819 33 0 0 0 chr5 41010588 41010621 -158619529 + AT_rich Low_complexity Low_complexity 1 33 0 366 241 99 94 chr5 41010737 41010949 -158619201 - MIR SINE MIR -1 261 49 399 303 92 22 chr5 41011432 41011459 -158618691 - L1M4 LINE L1 -2146 4000 3976 863 164 184 10 chr5 41011459 41011660 -158618490 - MER46A DNA MER2_type 0 236 1 399 303 92 22 chr5 41011660 41011817 -158618333 - L1M4 LINE L1 -2170 3976 3803 236 247 82 0 chr5 41011934 41012019 -158618131 - L1M4 LINE L1 -2458 3688 3597 1520 147 67 35 chr5 41014357 41014669 -158615481 + MLT1B LTR MaLR 65 386 -4 2313 96 0 3 chr5 41015439 41015740 -158614410 - AluSc SINE Alu -9 300 1 21 82 0 0 chr5 41015940 41015989 -158614161 + AT_rich Low_complexity Low_complexity 1 49 0 2212 101 0 19 chr5 41017368 41017684 -158612466 - AluSg SINE Alu 0 310 1 1276 258 109 34 chr5 41017928 41018431 -158611719 + MLT1H LTR MaLR 9 549 0 2080 117 0 13 chr5 41018877 41019175 -158610975 - AluSx SINE Alu -18 294 1 24 0 0 0 chr5 41019581 41019605 -158610545 + AT_rich Low_complexity Low_complexity 1 24 0 202 319 231 0 chr5 41019657 41019839 -158610311 + MIR SINE MIR 4 227 -35 23 33 0 0 chr5 41020518 41020548 -158609602 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr5 41020600 41020625 -158609525 + AT_rich Low_complexity Low_complexity 1 25 0 2053 113 40 7 chr5 41020626 41020926 -158609224 - AluSx SINE Alu -2 310 1 2208 105 7 0 chr5 41021740 41022034 -158608116 + AluSx SINE Alu 1 296 -16 7959 136 9 13 chr5 41022600 41024961 -158605189 - L1MA2 LINE L1 0 7723 5368 1724 190 3 10 chr5 41024961 41025266 -158604884 - AluSx SINE Alu -7 305 3 7959 136 9 13 chr5 41025266 41025362 -158604788 - L1MA2 LINE L1 -2355 5368 5273 1202 244 0 0 chr5 41025361 41025644 -158604506 - L1MA2 LINE L1 -3282 4283 4001 * 2469 135 39 36 chr5 41025648 41026126 -158604024 - L1MA2 LINE L1 -3806 3759 3284 2046 98 3 52 chr5 41026126 41026451 -158603699 + AluSp SINE Alu 1 309 -4 2469 135 39 36 chr5 41026451 41026555 -158603595 - L1MA2 LINE L1 -4281 3284 3171 2178 119 3 3 chr5 41026555 41026850 -158603300 + AluSg SINE Alu 1 295 -15 2469 135 39 36 chr5 41026850 41026876 -158603274 - L1MA2 LINE L1 -4394 3171 3147 2315 102 3 0 chr5 41026876 41027179 -158602971 - AluSx SINE Alu -8 304 1 256 299 112 0 chr5 41027213 41027320 -158602830 + MIR SINE MIR 131 249 -13 270 322 44 0 chr5 41027424 41027514 -158602636 + MIR3 SINE MIR 67 160 -48 256 263 75 12 chr5 41028348 41028428 -158601722 - MIR SINE MIR -88 120 36 334 241 161 0 chr5 41028571 41028683 -158601467 - MER112 DNA MER1_type -66 194 65 961 229 126 0 chr5 41028837 41029068 -158601082 + MIR SINE MIR 3 262 0 203 340 57 28 chr5 41029521 41029627 -158600523 - L2 LINE L2 -209 3063 2955 411 137 0 0 chr5 41029743 41029816 -158600334 + (CA)n Simple_repeat Simple_repeat 2 74 0 943 195 6 0 chr5 41029816 41029975 -158600175 - FAM SINE Alu -11 164 5 2120 127 0 0 chr5 41030816 41031128 -158599022 - AluSx SINE Alu 0 312 1 21 36 0 0 chr5 41032329 41032357 -158597793 + AT_rich Low_complexity Low_complexity 1 28 0 282 200 59 47 chr5 41032546 41032631 -158597519 - MIR SINE MIR -2 260 175 31 0 0 0 chr5 41032938 41032969 -158597181 + AT_rich Low_complexity Low_complexity 1 31 0 1641 183 7 33 chr5 41033435 41033735 -158596415 - AluJb SINE Alu -20 292 1 2079 141 0 6 chr5 41034029 41034341 -158595809 - AluSg SINE Alu 0 310 1 240 363 0 10 chr5 41034451 41034553 -158595597 + CT-rich Low_complexity Low_complexity 4 104 0 2274 104 0 0 chr5 41034674 41034972 -158595178 + AluSq SINE Alu 1 298 -15 916 177 6 13 chr5 41035920 41036078 -158594072 - FRAM SINE Alu -11 165 9 2041 139 7 7 chr5 41037186 41037489 -158592661 + AluSx SINE Alu 1 303 -9 6652 66 9 41 chr5 41037557 41038538 -158591612 - SVA Other Other -4 1382 433 5922 64 20 15 chr5 41038555 41039590 -158590560 - SVA Other Other -520 866 1 203 29 88 0 chr5 41039590 41039624 -158590526 + GA-rich Low_complexity Low_complexity 5 41 0 1148 151 34 5 chr5 41040964 41041170 -158588980 - L1MB7 LINE L1 -10 6174 5963 1086 229 90 86 chr5 41043740 41044286 -158585864 + MLT1H LTR MaLR 2 549 0 268 352 154 38 chr5 41044684 41045028 -158585122 - L2 LINE L2 -84 3188 2805 1289 336 92 11 chr5 41045045 41045765 -158584385 - L2 LINE L2 -629 2685 1908 272 294 71 116 chr5 41045772 41046126 -158584024 + L2 LINE L2 2925 3262 -10 610 266 7 0 chr5 41047456 41047610 -158582540 - L1PB4 LINE L1 -2 6154 6000 294 330 165 37 chr5 41047613 41048086 -158582064 + L2 LINE L2 2471 3026 -246 1009 289 53 44 chr5 41048220 41048393 -158581757 + L2 LINE L2 1570 1740 -1574 2254 36 0 0 chr5 41048393 41048668 -158581482 - L1PA4 LINE L1 -1 6154 5880 1009 289 53 44 chr5 41048668 41048948 -158581202 + L2 LINE L2 1740 2027 -1287 714 297 92 35 chr5 41048993 41049396 -158580754 - LTR16B LTR ERVL -51 413 13 1124 329 72 43 chr5 41049419 41050040 -158580110 + L2 LINE L2 2030 2668 -646 635 247 0 39 chr5 41050010 41050164 -158579986 + L2 LINE L2 3165 3312 -1 * 398 228 0 43 chr5 41050227 41050319 -158579831 + MER21B LTR ERV1 1 88 -775 2621 223 121 15 chr5 41050335 41051021 -158579129 + MER21B LTR ERV1 48 806 -57 532 118 9 27 chr5 41051040 41051150 -158579000 + (TTCC)n Simple_repeat Simple_repeat 1 108 0 307 315 204 11 chr5 41051154 41051449 -158578701 + L2 LINE L2 2722 3067 -246 22 35 0 0 chr5 41051841 41051870 -158578280 + AT_rich Low_complexity Low_complexity 1 29 0 218 317 37 12 chr5 41052068 41052150 -158578000 - L2 LINE L2 -4 3268 3185 1225 166 32 14 chr5 41052268 41052485 -158577665 + AluJo SINE Alu 60 280 -32 232 306 116 16 chr5 41052539 41052660 -158577490 - L2 LINE L2 -243 3070 2938 349 313 68 41 chr5 41052661 41052955 -158577195 - L2 LINE L2 -821 2493 2192 188 365 0 0 chr5 41053714 41053766 -158576384 - L2 LINE L2 -92 3180 3129 333 336 16 8 chr5 41054100 41054222 -158575928 + L2 LINE L2 3149 3271 -1 2516 76 0 0 chr5 41054316 41054619 -158575531 + AluSc SINE Alu 1 303 -6 637 267 169 4 chr5 41056291 41056516 -158573634 - MIR SINE MIR 0 262 1 649 261 121 5 chr5 41057522 41057737 -158572413 + MIR SINE MIR 13 252 -10 2260 88 17 0 chr5 41058158 41058454 -158571696 + AluY SINE Alu 1 301 -10 407 261 155 14 chr5 41059105 41059247 -158570903 + MIR SINE MIR 100 261 -1 2221 110 0 3 chr5 41060011 41060303 -158569847 - AluSg SINE Alu -19 291 1 297 285 88 82 chr5 41061225 41061424 -158568726 + L2 LINE L2 1795 1998 -1316 1983 41 0 4 chr5 41061424 41061669 -158568481 - L1PA7 LINE L1 -2 6152 5909 297 285 88 82 chr5 41061669 41061845 -158568305 + L2 LINE L2 1998 2172 -1142 279 309 139 62 chr5 41062041 41062365 -158567785 + L2 LINE L2 2554 2902 -412 207 352 0 14 chr5 41062643 41062714 -158567436 + L2 LINE L2 3236 3305 -8 861 80 9 0 chr5 41062823 41062935 -158567215 - AluY SINE Alu -32 279 167 244 309 151 60 chr5 41063038 41063336 -158566814 + L2 LINE L2 2578 2902 -412 207 352 0 14 chr5 41063614 41063685 -158566465 + L2 LINE L2 3236 3305 -8 1348 110 19 10 chr5 41063760 41063969 -158566181 - AluSg/x SINE Alu -9 303 93 200 373 0 0 chr5 41064461 41064536 -158565614 + C-rich Low_complexity Low_complexity 1 75 0 1683 188 3 13 chr5 41064558 41064731 -158565419 - AluJo SINE Alu -11 301 131 2242 112 0 10 chr5 41064731 41065044 -158565106 - AluSg SINE Alu 0 310 1 1683 188 3 13 chr5 41065044 41065174 -158564976 - AluJo SINE Alu -181 131 1 378 129 0 0 chr5 41065203 41065265 -158564885 + (CA)n Simple_repeat Simple_repeat 2 63 0 278 222 44 0 chr5 41065266 41065356 -158564794 + (TA)n Simple_repeat Simple_repeat 2 95 0 1535 139 7 78 chr5 41065580 41065874 -158564276 - AluSx SINE Alu -34 278 6 908 248 74 4 chr5 41066158 41066416 -158563734 - L1MB7 LINE L1 -67 6117 5842 980 245 106 36 chr5 41066421 41066780 -158563370 + MLT1D LTR MaLR 5 388 -117 2123 258 63 29 chr5 41066865 41067033 -158563117 + L1M4 LINE L1 3074 3235 -2911 1808 134 12 0 chr5 41067033 41067286 -158562864 + AluSx SINE Alu 3 258 -54 2123 258 63 29 chr5 41067286 41068037 -158562113 + L1M4 LINE L1 3235 4024 -2122 2924 139 32 4 chr5 41068040 41068536 -158561614 - Tigger4(Zombi) DNA MER2_type 0 2731 2222 532 162 368 0 chr5 41068534 41068651 -158561499 - Tigger4(Zombi) DNA MER2_type -2571 160 1 * 1993 238 56 41 chr5 41068655 41068861 -158561289 + L1M4 LINE L1 4033 4234 -1912 1490 203 15 7 chr5 41068861 41069132 -158561018 + AluJo SINE Alu 10 282 -30 9936 55 11 2 chr5 41069142 41071187 -158558963 - L1PA6 LINE L1 -7 6147 4085 1993 238 56 41 chr5 41071187 41071653 -158558497 + L1M4 LINE L1 4242 4726 -1420 298 195 54 154 chr5 41071689 41071838 -158558312 + L2 LINE L2 3179 3312 -1 747 261 144 46 chr5 41072366 41072672 -158557478 + MLT1J LTR MaLR 105 440 -71 2684 222 48 25 chr5 41072800 41073565 -158556585 - L1ME1 LINE L1 -127 6039 5257 1205 162 44 59 chr5 41073566 41073838 -158556312 + MSTB1 LTR MaLR 165 432 0 572 195 114 67 chr5 41073867 41074077 -158556073 - L1ME1 LINE L1 -1048 5098 4879 390 229 49 25 chr5 41074317 41074439 -158555711 + MIR SINE MIR 125 249 -13 2332 188 36 50 chr5 41075458 41075587 -158554563 + L1M4 LINE L1 4829 4958 -1226 2124 123 3 3 chr5 41075587 41075888 -158554262 + AluSx SINE Alu 1 301 -11 2332 188 36 50 chr5 41075888 41076222 -158553928 + L1M4 LINE L1 4958 5288 -896 2520 63 0 0 chr5 41076222 41076524 -158553626 + AluY SINE Alu 1 302 -9 2332 188 36 50 chr5 41076524 41076839 -158553311 + L1M4 LINE L1 5288 5606 -578 * 3990 169 29 33 chr5 41076837 41077707 -158552443 - L1 LINE L1 -1839 4307 3442 3615 159 77 34 chr5 41077708 41077731 -158552419 + L1 LINE L1 4337 4358 -1788 3698 61 2 4 chr5 41077731 41078209 -158551941 + L1PA7 LINE L1 5677 6153 -1 3615 159 77 34 chr5 41078209 41078303 -158551847 + L1 LINE L1 4358 4447 -1699 2086 113 6 58 chr5 41078303 41078632 -158551518 + AluSx SINE Alu 1 312 0 3615 159 77 34 chr5 41078632 41078673 -158551477 + L1 LINE L1 4447 4485 -1661 2390 83 7 0 chr5 41078673 41078974 -158551176 + AluSg SINE Alu 1 303 -7 3615 159 77 34 chr5 41078974 41079610 -158550540 + L1 LINE L1 4485 5167 -979 1409 272 92 22 chr5 41079610 41080346 -158549804 - L1MEc LINE L1 -4098 2298 1511 25 0 0 0 chr5 41080901 41080926 -158549224 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 41081420 41081450 -158548700 + AT_rich Low_complexity Low_complexity 1 30 0 401 229 162 0 chr5 41081967 41082072 -158548078 - L2 LINE L2 -2 3311 3190 774 31 0 0 chr5 41082861 41082958 -158547192 + (TCCCC)n Simple_repeat Simple_repeat 5 101 0 1916 140 10 14 chr5 41082958 41083250 -158546900 - AluSx SINE Alu -21 291 1 231 260 0 0 chr5 41083560 41083610 -158546540 + MER3 DNA MER1_type 41 90 -119 * 907 177 65 0 chr5 41083577 41083763 -158546387 - MER3 DNA MER1_type -10 199 2 237 276 0 46 chr5 41083909 41083996 -158546154 - L2 LINE L2 -407 2907 2825 2410 89 0 0 chr5 41084047 41084349 -158545801 - AluSg SINE Alu -8 302 1 1036 262 37 37 chr5 41084352 41084559 -158545591 + L2 LINE L2 2959 3168 -145 1772 175 0 19 chr5 41084559 41084868 -158545282 - AluJo SINE Alu -9 303 1 1036 262 37 37 chr5 41084868 41085015 -158545135 + L2 LINE L2 3167 3313 0 1938 110 84 0 chr5 41086023 41086296 -158543854 + AluSg SINE Alu 5 300 -10 24 0 0 0 chr5 41087792 41087816 -158542334 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 41088140 41088168 -158541982 + AT_rich Low_complexity Low_complexity 1 28 0 419 301 74 0 chr5 41088406 41088569 -158541581 + MIR SINE MIR 81 255 -7 920 233 19 64 chr5 41089240 41089506 -158540644 + HAL1 LINE L1 1 254 -2253 246 336 97 0 chr5 41089514 41089627 -158540523 + HAL1 LINE L1 383 506 -2001 210 171 0 0 chr5 41089670 41089711 -158540439 + (TTG)n Simple_repeat Simple_repeat 1 41 0 790 299 45 14 chr5 41089711 41089932 -158540218 - MIR SINE MIR -12 250 23 1586 179 59 15 chr5 41089934 41090024 -158540126 + MER58B DNA MER1_type 4 89 -2331 2035 169 68 52 chr5 41090024 41090521 -158539629 - MLT1D LTR MaLR 0 505 1 1586 179 59 15 chr5 41090521 41090754 -158539396 + MER58B DNA MER1_type 89 341 0 831 251 82 98 chr5 41090760 41091420 -158538730 + HAL1 LINE L1 793 1441 -1066 1898 129 47 0 chr5 41092140 41092419 -158537731 - AluSx SINE Alu -20 292 1 267 270 153 22 chr5 41092686 41092823 -158537327 + L2 LINE L2 3159 3313 0 877 259 59 39 chr5 41093050 41093305 -158536845 - MIR SINE MIR -2 260 1 630 162 7 15 chr5 41093322 41093458 -158536692 + L1MB8 LINE L1 6044 6178 0 181 200 0 0 chr5 41093710 41093745 -158536405 + L2 LINE L2 3274 3308 -5 1751 138 0 4 chr5 41094392 41094653 -158535497 - AluSx SINE Alu -9 303 44 800 271 87 27 chr5 41094666 41094998 -158535152 - L2 LINE L2 -449 2865 2514 183 42 0 0 chr5 41095767 41095791 -158534359 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 24 0 0 0 chr5 41095914 41095938 -158534212 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr5 41095943 41095964 -158534186 + (T)n Simple_repeat Simple_repeat 1 21 0 712 114 29 9 chr5 41096010 41096115 -158534035 - U6 snRNA snRNA 0 107 1 457 236 65 96 chr5 41096524 41096753 -158533397 + MER112 DNA MER1_type 32 253 -7 291 247 13 0 chr5 41097216 41097293 -158532857 + MER113 DNA MER1_type? 4 81 -440 689 226 37 0 chr5 41097340 41097504 -158532646 - L1MB5 LINE L1 -9 6165 5996 5091 36 2 2 chr5 41097520 41098161 -158531989 - L1PA4 LINE L1 -757 5389 4749 6498 26 1 0 chr5 41098170 41098932 -158531218 + L1PA4 LINE L1 5393 6155 0 774 240 82 33 chr5 41098942 41099246 -158530904 + MER113 DNA MER1_type? 154 472 -49 222 293 155 26 chr5 41099745 41099861 -158530289 + MIR SINE MIR 118 248 -14 5283 123 40 67 chr5 41099908 41100576 -158529574 - L1MA5A LINE L1 -4 6935 6251 4259 121 19 0 chr5 41100576 41101214 -158528936 - MER39B LTR ERV1 -1 652 3 5283 123 40 67 chr5 41101214 41101547 -158528603 - L1MA5A LINE L1 -688 6251 5961 2129 124 0 13 chr5 41101547 41101854 -158528296 - AluSx SINE Alu -9 303 1 5283 123 40 67 chr5 41101854 41101919 -158528231 - L1MA5A LINE L1 -978 5961 5896 8869 206 32 34 chr5 41101935 41103118 -158527032 - L1MA5A LINE L1 -1793 4995 3812 1614 158 16 63 chr5 41103118 41103434 -158526716 - AluJb SINE Alu -11 301 1 8869 206 32 34 chr5 41103434 41103968 -158526182 - L1MA5A LINE L1 -2976 3812 3279 1647 189 7 0 chr5 41103968 41104248 -158525902 - AluJo SINE Alu -30 282 1 8869 206 32 34 chr5 41104248 41107336 -158522814 - L1MA5A LINE L1 -3509 3279 15 242 250 0 0 chr5 41107477 41107529 -158522621 + (TAA)n Simple_repeat Simple_repeat 1 52 0 753 251 121 9 chr5 41107532 41107755 -158522395 - MIR SINE MIR 0 262 15 6682 135 59 1 chr5 41108104 41109267 -158520883 + Tigger3b DNA MER2_type 1 1231 0 23 68 0 0 chr5 41109416 41109460 -158520690 + AT_rich Low_complexity Low_complexity 1 44 0 2372 103 0 0 chr5 41110083 41110394 -158519756 + AluY SINE Alu 1 311 0 340 225 225 38 chr5 41163669 41163829 -158466321 + MIR3 SINE MIR 8 197 -11 275 311 111 11 chr5 41166759 41166849 -158463301 - L2 LINE L2 -31 3241 3143 1819 186 0 0 chr5 41168011 41168317 -158461833 - AluJo SINE Alu -6 306 1 5331 202 98 56 chr5 41168336 41168509 -158461641 - L1MC4a LINE L1 0 7808 7644 2151 146 0 0 chr5 41168509 41168817 -158461333 + AluSx SINE Alu 3 310 -2 5331 202 98 56 chr5 41168817 41170472 -158459678 - L1MC4a LINE L1 -164 7644 5903 309 262 10 12 chr5 41170856 41171136 -158459014 - L1ME2 LINE L1 -229 5935 5654 502 293 118 7 chr5 41171327 41171597 -158458553 - LTR16C LTR ERVL -2 489 190 438 315 38 25 chr5 41172698 41172936 -158457214 - L1MC4a LINE L1 -1894 5914 5674 258 192 125 85 chr5 41172959 41173258 -158456892 - L1MC4a LINE L1 -789 5357 5176 1022 237 217 15 chr5 41173460 41173856 -158456294 - MLT1D LTR MaLR -29 476 1 249 330 40 0 chr5 41173892 41174065 -158456085 - L1MC4a LINE L1 -1217 4929 4750 479 295 70 61 chr5 41174165 41174507 -158455643 - L1MC4a LINE L1 -1546 4600 4256 304 229 57 9 chr5 41174559 41174664 -158455486 - L1MC4a LINE L1 -1952 4194 4085 274 231 26 0 chr5 41174697 41174775 -158455375 - MER116 DNA Mariner 0 80 1 534 190 145 169 chr5 41174840 41175171 -158454979 - L2 LINE L2 0 3313 2991 333 100 0 0 chr5 41175173 41175223 -158454927 + (G)n Simple_repeat Simple_repeat 1 50 0 316 346 44 11 chr5 41175393 41175575 -158454575 - L1MC4a LINE L1 -2230 3916 3729 194 280 20 0 chr5 41175969 41176019 -158454131 - MIR SINE MIR -102 160 110 195 42 0 0 chr5 41177216 41177240 -158452910 + (T)n Simple_repeat Simple_repeat 1 24 0 333 331 15 15 chr5 41177246 41177376 -158452774 + MER5A DNA MER1_type 50 179 -10 973 219 73 5 chr5 41177731 41177950 -158452200 - MIR SINE MIR 0 262 29 297 309 147 22 chr5 41178060 41178196 -158451954 + MIR3 SINE MIR 5 157 -51 21 0 0 0 chr5 41178623 41178644 -158451506 + AT_rich Low_complexity Low_complexity 1 21 0 1629 59 0 18 chr5 41180242 41180461 -158449689 - L1PA7 LINE L1 0 6154 5940 647 155 295 14 chr5 41181517 41181724 -158448426 + MER5C DNA MER1_type 57 321 -3 26 0 0 0 chr5 41181836 41181862 -158448288 + AT_rich Low_complexity Low_complexity 1 26 0 4256 165 62 15 chr5 41181866 41182008 -158448142 - L1MB2 LINE L1 -6 6165 6031 2253 126 21 12 chr5 41182008 41182342 -158447808 - MER1B DNA MER1_type 0 337 1 4256 165 62 15 chr5 41182342 41183406 -158446744 - L1MB2 LINE L1 -140 6031 4904 13122 156 18 15 chr5 41183600 41184815 -158445335 + L1P3 LINE L1 4 1214 -5247 180 77 0 0 chr5 41184815 41184841 -158445309 + (CAA)n Simple_repeat Simple_repeat 2 27 0 13122 156 18 15 chr5 41184841 41187441 -158442709 + L1P3 LINE L1 1214 3894 -2567 6842 129 12 37 chr5 41187542 41188936 -158441214 + L1PA8A LINE L1 2531 3890 -2256 1385 77 73 4 chr5 41188937 41189170 -158440980 + L1PA8A LINE L1 5281 5529 -602 9421 111 39 7 chr5 41189170 41191332 -158438818 + L1PA8A LINE L1 3893 6118 -13 627 166 83 24 chr5 41191775 41191934 -158438216 - L1ME2 LINE L1 -9 6302 6003 1850 162 7 7 chr5 41192020 41192310 -158437840 + AluJo SINE Alu 1 290 -22 2321 113 90 3 chr5 41192313 41192648 -158437502 + THE1B LTR MaLR 1 364 0 580 278 105 60 chr5 41194837 41195085 -158435065 + MIR SINE MIR 1 259 -3 660 261 54 14 chr5 41195686 41195895 -158434255 - MIR SINE MIR -3 259 44 233 364 117 28 chr5 41196521 41197018 -158433132 + L2 LINE L2 2420 2960 -354 2745 23 0 0 chr5 41198730 41199032 -158431118 + AluY SINE Alu 3 304 -7 1723 245 74 17 chr5 41199053 41199514 -158430636 + MLT1G1 LTR MaLR 109 595 0 261 241 203 53 chr5 41199568 41199944 -158430206 - L1MC4a LINE L1 -111 6010 5578 2211 152 48 0 chr5 41200056 41200431 -158429719 - MER57A LTR ERV1 -9 394 2 1117 153 0 0 chr5 41200432 41200602 -158429548 - MER57A-int LTR ERV1 0 7537 7368 225 132 26 0 chr5 41200602 41200640 -158429510 - LTR54B LTR ERV1 -226 272 234 421 71 18 0 chr5 41200640 41200696 -158429454 - MER57A-int LTR ERV1 -202 7335 7279 805 101 23 23 chr5 41200696 41200825 -158429325 - LTR54B LTR ERV1 -367 131 3 17496 125 32 55 chr5 41200825 41200926 -158429224 - MER57A-int LTR ERV1 -391 7146 7044 2128 78 34 20 chr5 41200926 41201219 -158428931 + AluSq SINE Alu 1 297 -16 2222 102 0 0 chr5 41201222 41201507 -158428643 - AluSg1 SINE Alu -24 285 1 17496 125 32 55 chr5 41201507 41204654 -158425496 - MER57A-int LTR ERV1 -495 7042 1927 2340 82 10 0 chr5 41204654 41204946 -158425204 + AluSp SINE Alu 1 295 -18 17496 125 32 55 chr5 41204946 41205149 -158425001 - MER57A-int LTR ERV1 -5610 1927 1721 339 234 0 0 chr5 41205250 41205327 -158424823 - MER57A-int LTR ERV1 -2890 3441 3365 555 181 0 0 chr5 41205399 41205493 -158424657 - MER57A-int LTR ERV1 -2991 3340 3247 362 217 89 66 chr5 41205566 41205801 -158424349 - MER57A-int LTR ERV1 -3724 1980 1228 1575 89 5 0 chr5 41205920 41206123 -158424027 - AluSp SINE Alu -11 302 99 257 193 88 0 chr5 41206168 41206225 -158423925 - MER34C LTR ERV1 -369 216 155 2121 138 7 0 chr5 41206230 41206534 -158423616 + AluSx SINE Alu 1 306 -6 5402 137 32 5 chr5 41206785 41207605 -158422545 - MER57A-int LTR ERV1 -6695 842 1 2624 144 18 2 chr5 41207605 41208002 -158422148 - MER57A LTR ERV1 0 403 1 1832 201 14 58 chr5 41208005 41208439 -158421711 + MLT1C LTR MaLR 53 467 0 419 152 0 0 chr5 41208608 41208674 -158421476 + MLT1F1 LTR MaLR 502 567 0 289 312 40 75 chr5 41209374 41209573 -158420577 + MIR SINE MIR 23 214 -48 210 119 70 0 chr5 41210287 41210322 -158419828 + MIR SINE MIR 30 115 -143 2398 112 0 0 chr5 41210504 41210816 -158419334 - AluSx SINE Alu 0 312 1 296 324 18 0 chr5 41211595 41211706 -158418444 - MIR3 SINE MIR -6 202 90 331 260 26 84 chr5 41211968 41211981 -158418169 + MIR SINE MIR 117 129 -133 2270 157 10 54 chr5 41211981 41212389 -158417761 + MLT1B LTR MaLR 1 390 0 331 260 26 84 chr5 41212389 41212529 -158417621 + MIR SINE MIR 129 261 -1 305 304 125 24 chr5 41214023 41214191 -158415959 - MER5A DNA MER1_type -4 185 1 198 218 75 27 chr5 41214485 41214569 -158415581 - MIR SINE MIR -64 144 107 448 246 42 8 chr5 41215066 41215184 -158414966 + MIR SINE MIR 23 144 -64 184 222 0 0 chr5 41215788 41215824 -158414326 + L2 LINE L2 3277 3312 -1 238 181 64 0 chr5 41216037 41216131 -158414019 + (TA)n Simple_repeat Simple_repeat 1 100 0 225 172 111 71 chr5 41216137 41216236 -158413914 - L1MB2 LINE L1 -1 6170 6068 2142 123 3 0 chr5 41216250 41216542 -158413608 - AluSp SINE Alu -20 293 1 22 56 0 0 chr5 41216642 41216678 -158413472 + AT_rich Low_complexity Low_complexity 1 36 0 242 290 0 0 chr5 41216990 41217052 -158413098 - L2 LINE L2 -28 3285 3224 249 314 20 10 chr5 41217124 41217226 -158412924 - L2 LINE L2 -673 2641 2539 2445 84 0 3 chr5 41217226 41217537 -158412613 + AluY SINE Alu 1 310 -1 271 204 0 0 chr5 41217713 41217762 -158412388 + Charlie8 DNA MER1_type 128 176 -2241 31 0 0 0 chr5 41218541 41218572 -158411578 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr5 41218745 41218766 -158411384 + (GCTG)n Simple_repeat Simple_repeat 1 21 0 208 277 0 0 chr5 41219296 41219343 -158410807 + L2 LINE L2 3133 3179 -93 2748 121 31 5 chr5 41219383 41219771 -158410379 + MER48 LTR ERV1 1 398 0 336 118 289 13 chr5 41219821 41219897 -158410253 + MER4D LTR ERV1 1 97 -775 2014 185 91 37 chr5 41219898 41220362 -158409788 - LTR2B LTR ERV1 0 490 2 45373 100 28 27 chr5 41220362 41226160 -158403990 - Harlequin LTR ERV1 -8 6888 939 1057 105 0 0 chr5 41226160 41226303 -158403847 - AluY SINE Alu -16 295 153 45373 100 28 27 chr5 41226303 41227243 -158402907 - Harlequin LTR ERV1 -5957 939 1 1910 191 75 30 chr5 41227243 41227682 -158402468 - LTR2B LTR ERV1 0 490 32 3636 165 70 57 chr5 41227698 41228499 -158401651 + MER4D LTR ERV1 93 903 0 228 266 180 29 chr5 41228902 41229041 -158401109 - MIR SINE MIR -83 179 20 225 287 178 0 chr5 41229712 41229813 -158400337 + MIR SINE MIR 28 146 -62 352 307 114 76 chr5 41229990 41230479 -158399671 + L2 LINE L2 2470 2976 -337 349 289 0 0 chr5 41230955 41231071 -158399079 - MIR3 SINE MIR -3 205 89 2209 119 0 0 chr5 41231174 41231468 -158398682 - AluSx SINE Alu -18 294 1 260 331 111 22 chr5 41231489 41231670 -158398480 - MIR SINE MIR -64 198 2 354 246 12 35 chr5 41231842 41231943 -158398207 + MIR SINE MIR 5 103 -105 266 130 0 0 chr5 41231949 41231995 -158398155 + Alu SINE Alu 257 302 0 210 253 76 0 chr5 41232064 41232143 -158398007 + MIR SINE MIR 108 192 -70 1521 127 125 30 chr5 41233404 41233702 -158396448 + MSTA LTR MaLR 1 342 -33 1932 122 0 4 chr5 41233702 41233972 -158396178 - AluSx SINE Alu -4 308 40 1521 127 125 30 chr5 41233972 41234010 -158396140 + MSTA LTR MaLR 342 375 0 194 322 129 0 chr5 41234416 41234587 -158395563 + L2 LINE L2 2128 2320 -994 3264 76 62 5 chr5 41234847 41235267 -158394883 + MLT2A1 LTR ERVL 1 444 0 33221 72 8 9 chr5 41235267 41236650 -158393500 + HERVL-A1 LTR ERVL 1 1384 -4270 2309 107 7 0 chr5 41236650 41236959 -158393191 + AluY SINE Alu 1 311 0 33221 72 8 9 chr5 41236959 41239779 -158390371 + HERVL-A1 LTR ERVL 1384 4200 -1454 3288 190 18 16 chr5 41239825 41240234 -158389916 + L1MB5 LINE L1 5549 5961 -213 2357 101 0 0 chr5 41240234 41240532 -158389618 - AluSg SINE Alu -12 298 1 3288 190 18 16 chr5 41240532 41240747 -158389403 + L1MB5 LINE L1 5961 6174 0 848 278 53 35 chr5 41240930 41241268 -158388882 - L2 LINE L2 -85 3228 2885 624 176 46 9 chr5 41241291 41241399 -158388751 + MER45A DNA AcHobo 63 174 -4 1036 240 86 31 chr5 41241434 41241810 -158388340 + MER57A LTR ERV1 1 402 0 669 243 151 0 chr5 41243480 41243632 -158386518 + MER5A DNA MER1_type 9 183 -6 895 199 15 0 chr5 41244313 41244509 -158385641 - L1MD3 LINE L1 -10 7985 7787 1949 108 28 3 chr5 41244509 41244797 -158385353 + AluSx SINE Alu 1 295 -17 2287 138 19 20 chr5 41244834 41245198 -158384952 + MLT1A1 LTR MaLR 1 505 0 2494 177 35 8 chr5 41245203 41245688 -158384462 - L1MC4a LINE L1 -207 7601 7104 249 167 0 0 chr5 41245870 41245924 -158384226 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 1094 261 99 34 chr5 41246275 41246719 -158383431 + MLT1K LTR MaLR 1 473 -3 509 121 0 0 chr5 41246755 41246821 -158383329 + MER1B DNA MER1_type 264 329 0 986 281 36 17 chr5 41248010 41248312 -158381838 + L2 LINE L2 2551 2858 -456 1075 258 49 53 chr5 41248403 41248814 -158381336 - MLT1I LTR MaLR 0 409 1 1916 78 39 11 chr5 41248926 41249209 -158380941 + L1MA2 LINE L1 6014 6304 0 449 192 41 81 chr5 41249498 41249670 -158380480 + MER103 DNA DNA 2 166 0 283 238 86 57 chr5 41250117 41250222 -158379928 + L2 LINE L2 2946 3053 -219 1825 109 0 0 chr5 41250868 41251115 -158379035 - AluSx SINE Alu -39 273 27 574 196 217 22 chr5 41251220 41251450 -158378700 + ORSL DNA AcHobo 1 275 0 786 154 5 135 chr5 41251594 41251802 -158378348 + MER53 DNA DNA 7 187 -2 455 0 18 0 chr5 41252871 41252926 -158377224 + (TG)n Simple_repeat Simple_repeat 2 57 0 360 233 41 99 chr5 41253103 41253275 -158376875 - MER103 DNA DNA -3 163 2 610 274 53 31 chr5 41253823 41254049 -158376101 + L2 LINE L2 3081 3311 -2 1861 148 10 3 chr5 41255106 41255403 -158374747 - AluJo SINE Alu -7 305 7 453 66 0 0 chr5 41257034 41257095 -158373055 + (TCC)n Simple_repeat Simple_repeat 3 63 0 531 280 27 7 chr5 41258044 41258194 -158371956 - MER5A DNA MER1_type -1 188 36 251 27 0 27 chr5 41259138 41259175 -158370975 + (TG)n Simple_repeat Simple_repeat 2 37 0 1107 245 41 41 chr5 41259292 41259635 -158370515 + L2 LINE L2 2569 2911 -403 932 207 29 29 chr5 41259638 41259750 -158370400 - MER20 DNA MER1_type -8 211 97 2553 114 3 14 chr5 41259750 41260118 -158370032 + THE1B LTR MaLR 1 364 0 932 207 29 29 chr5 41260118 41260213 -158369937 - MER20 DNA MER1_type -121 98 4 184 103 0 51 chr5 41260232 41260271 -158369879 + L2 LINE L2 2927 2963 -350 581 285 45 49 chr5 41260339 41260627 -158369523 + L2 LINE L2 2971 3257 -56 2276 94 0 3 chr5 41260989 41261296 -158368854 - AluSq SINE Alu -7 306 1 244 200 15 0 chr5 41261993 41262040 -158368110 - MER53 DNA DNA -3 186 136 1887 117 8 0 chr5 41262040 41262305 -158367845 + L1MC1 LINE L1 6061 6327 -6 244 200 15 0 chr5 41262305 41262322 -158367828 - MER53 DNA DNA -53 136 121 279 297 0 0 chr5 41264271 41264345 -158365805 + (CATA)n Simple_repeat Simple_repeat 2 75 0 387 280 40 8 chr5 41264627 41264759 -158365391 - MIR SINE MIR -62 146 62 298 261 0 72 chr5 41265224 41265335 -158364815 + MIR SINE MIR 29 131 -77 350 267 105 37 chr5 41267642 41267829 -158362321 + MIR SINE MIR 50 253 -9 715 291 55 14 chr5 41268177 41268466 -158361684 + Charlie2 DNA MER1_type 1 301 -2481 1314 272 74 27 chr5 41268488 41268974 -158361176 + L1MC4 LINE L1 7392 7900 -142 530 184 253 13 chr5 41269221 41269379 -158360771 + Charlie2a DNA MER1_type 1468 1663 -1199 494 192 96 8 chr5 41269395 41269520 -158360630 + Charlie2a DNA MER1_type 2724 2859 -3 501 282 92 7 chr5 41270120 41270262 -158359888 + MIR SINE MIR 1 154 -108 209 194 0 0 chr5 41270984 41271020 -158359130 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 480 253 68 19 chr5 41272248 41272410 -158357740 - MIR SINE MIR -54 208 39 494 250 8 16 chr5 41272818 41272942 -158357208 + L2 LINE L2 3187 3309 -4 819 179 28 0 chr5 41274282 41274427 -158355723 + MER5B DNA MER1_type 3 151 -27 232 254 0 17 chr5 41274550 41274609 -158355541 - MIR SINE MIR -157 105 48 23 0 0 0 chr5 41276139 41276162 -158353988 + GC_rich Low_complexity Low_complexity 1 23 0 187 276 207 0 chr5 41277179 41277266 -158352884 + MIR SINE MIR 158 262 0 259 176 78 0 chr5 41283519 41283570 -158346580 - L2 LINE L2 -14 3258 3204 2002 136 0 0 chr5 41284449 41284743 -158345407 + AluSx SINE Alu 9 302 -10 299 182 80 57 chr5 41284744 41284832 -158345318 + MER5B DNA MER1_type 55 144 -34 718 160 56 0 chr5 41286443 41286568 -158343582 - MER58B DNA MER1_type -2 339 208 548 184 0 0 chr5 41286611 41286698 -158343452 - MER58B DNA MER1_type -252 89 3 467 179 32 11 chr5 41286740 41286835 -158343315 - MIR3 SINE MIR -22 186 90 330 26 0 0 chr5 41287375 41287414 -158342736 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2215 112 0 6 chr5 41287428 41287741 -158342409 + AluSx SINE Alu 1 311 -1 754 154 8 0 chr5 41287741 41287858 -158342292 - AluJo/FLAM SINE Alu -184 118 1 188 288 59 59 chr5 41288317 41288435 -158341715 + MIR SINE MIR 17 134 -128 187 218 109 18 chr5 41288798 41288853 -158341297 - MIR SINE MIR -71 191 132 1306 254 23 3 chr5 41289450 41289749 -158340401 + MLT1H LTR MaLR 2 306 -243 234 264 88 48 chr5 41289979 41290104 -158340046 + MARNA DNA Mariner 409 538 -48 1769 151 18 85 chr5 41290723 41291113 -158339037 - L1MA7 LINE L1 0 6291 5928 523 157 24 0 chr5 41292354 41292437 -158337713 - MER58B DNA MER1_type 0 341 257 890 200 47 5 chr5 41292545 41292735 -158337415 - MER58B DNA MER1_type -90 251 54 263 260 16 71 chr5 41292824 41292951 -158337199 + MIR SINE MIR 102 221 -41 910 268 170 54 chr5 41292993 41293280 -158336870 - MLT1L LTR MaLR 0 615 363 2379 59 0 7 chr5 41293280 41293585 -158336565 - AluY SINE Alu -8 303 1 910 268 170 54 chr5 41293585 41293816 -158336334 - MLT1L LTR MaLR -252 363 37 197 246 154 0 chr5 41294670 41294735 -158335415 + L3 LINE CR1 1502 1576 -1 216 158 0 0 chr5 41294839 41294877 -158335273 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 241 324 27 74 chr5 41295027 41295175 -158334975 - L2 LINE L2 -193 3079 2939 581 109 0 10 chr5 41295187 41295288 -158334862 + (TCCA)n Simple_repeat Simple_repeat 3 102 0 329 213 25 82 chr5 41295909 41296031 -158334119 - MIR3 SINE MIR -3 205 91 399 268 167 0 chr5 41296132 41296270 -158333880 + MIR SINE MIR 28 188 -74 405 192 21 62 chr5 41296307 41296427 -158333723 + MLT1H LTR MaLR 92 236 -232 1199 199 119 11 chr5 41296487 41296748 -158333402 - L1ME LINE L1 -442 5722 5434 252 292 11 27 chr5 41297242 41297353 -158332797 + CT-rich Low_complexity Low_complexity 1 109 0 430 209 18 9 chr5 41297653 41297763 -158332387 - L1ME LINE L1 -318 5803 5693 1504 179 21 14 chr5 41297784 41298074 -158332076 + AluJb SINE Alu 1 292 -20 469 301 21 11 chr5 41298083 41298269 -158331881 - L1ME LINE L1 -422 5699 5512 21 71 0 0 chr5 41298290 41298332 -158331818 + AT_rich Low_complexity Low_complexity 1 42 0 836 304 4 39 chr5 41298580 41298860 -158331290 + MLT1I LTR MaLR 3 272 -137 259 246 0 16 chr5 41299073 41299134 -158331016 + MLT1I LTR MaLR 348 407 -2 180 97 0 0 chr5 41299585 41299616 -158330534 + (TG)n Simple_repeat Simple_repeat 1 31 0 378 61 0 0 chr5 41299616 41299665 -158330485 + (GA)n Simple_repeat Simple_repeat 2 50 0 272 281 34 48 chr5 41300459 41300605 -158329545 - MER5A DNA MER1_type 0 189 46 285 188 0 0 chr5 41300941 41300989 -158329161 - L2 LINE L2 -14 3299 3252 365 70 18 0 chr5 41301118 41301175 -158328975 + (TG)n Simple_repeat Simple_repeat 1 58 0 421 248 62 8 chr5 41301307 41301436 -158328714 - L2 LINE L2 0 3313 3178 647 283 63 1 chr5 41302443 41302746 -158327404 - LTR16C LTR ERVL -134 357 3 394 270 18 9 chr5 41302987 41303098 -158327052 - MIR SINE MIR -116 146 35 222 266 109 0 chr5 41303187 41303251 -158326899 - L2 LINE L2 -9 3304 3234 1119 278 75 26 chr5 41303314 41303891 -158326259 - MER115 DNA AcHobo 0 693 75 22 88 0 0 chr5 41304468 41304525 -158325625 + AT_rich Low_complexity Low_complexity 1 57 0 1129 68 6 6 chr5 41304762 41304923 -158325227 + (TCTA)n Simple_repeat Simple_repeat 4 164 0 1738 150 0 51 chr5 41304954 41305267 -158324883 - AluJo SINE Alu -15 297 1 1935 198 16 23 chr5 41305530 41305960 -158324190 - MER63B DNA MER1_type -6 430 4 1081 176 88 15 chr5 41305987 41306191 -158323959 - MER20 DNA MER1_type 0 219 1 260 259 19 0 chr5 41306291 41306345 -158323805 - L2 LINE L2 -67 3205 3151 821 191 124 5 chr5 41306958 41307152 -158322998 - MER20 DNA MER1_type 0 219 3 260 259 19 0 chr5 41307252 41307306 -158322844 - L2 LINE L2 -67 3205 3151 488 264 17 40 chr5 41308410 41308584 -158321566 + MER104 DNA Tc2 7 176 -4 724 281 43 0 chr5 41308651 41308861 -158321289 + MIR SINE MIR 8 226 -36 2369 159 43 26 chr5 41309595 41310016 -158320134 - MSTA LTR MaLR 0 428 1 905 221 24 19 chr5 41311182 41311390 -158318760 + MER63A DNA MER1_type 2 210 0 1312 159 0 10 chr5 41311409 41311617 -158318533 - MER20 DNA MER1_type -2 217 12 2833 93 0 0 chr5 41311746 41312110 -158318040 - THE1B LTR MaLR 0 364 1 206 353 24 0 chr5 41312280 41312365 -158317785 - MIR3 SINE MIR -35 173 87 231 326 109 11 chr5 41314351 41314443 -158315707 + L2 LINE L2 3146 3246 -26 1305 207 31 34 chr5 41314457 41314843 -158315307 - L1ME2 LINE L1 -3 6175 5785 1661 213 37 93 chr5 41315002 41315442 -158314708 + MLT1J LTR MaLR 3 410 -101 2297 98 0 0 chr5 41315442 41315761 -158314389 + AluSx SINE Alu 1 319 0 1661 213 37 93 chr5 41315761 41315858 -158314292 + MLT1J LTR MaLR 410 511 0 21 36 0 0 chr5 41316100 41316128 -158314022 + AT_rich Low_complexity Low_complexity 1 28 0 346 233 17 12 chr5 41317057 41317229 -158312921 + (TA)n Simple_repeat Simple_repeat 1 173 0 606 258 143 14 chr5 41317306 41317523 -158312627 - MIR SINE MIR 0 262 18 481 157 10 10 chr5 41318755 41318857 -158311293 + CT-rich Low_complexity Low_complexity 3 104 0 2027 170 86 105 chr5 41318904 41319476 -158310674 + MLT1E1 LTR MaLR 80 640 -14 241 170 64 0 chr5 41321003 41321050 -158309100 + MIR SINE MIR 117 166 -96 610 266 140 0 chr5 41321085 41321292 -158308858 + MIR SINE MIR 17 252 -10 369 224 252 21 chr5 41321689 41321832 -158308318 + MER5B DNA MER1_type 1 176 -2 258 255 302 7 chr5 41322231 41322380 -158307770 + MIR SINE MIR 4 196 -66 344 243 11 11 chr5 41322432 41322609 -158307541 + (ATGGTG)n Simple_repeat Simple_repeat 1 177 0 809 296 115 11 chr5 41322743 41323118 -158307032 - MLT2F LTR ERVL -245 418 5 235 175 0 0 chr5 41324147 41324187 -158305963 + MIR SINE MIR 113 152 -56 277 269 108 16 chr5 41324384 41324538 -158305612 + MLT1J2 LTR MaLR 32 234 -303 2224 119 0 3 chr5 41325976 41326270 -158303880 + AluSg SINE Alu 1 293 -17 683 254 71 0 chr5 41326273 41326494 -158303656 + MIR SINE MIR 23 260 -2 386 257 9 18 chr5 41326638 41326747 -158303403 - L2 LINE L2 0 3313 3206 254 259 134 9 chr5 41326749 41326861 -158303289 + L1ME LINE L1 5758 5883 -238 412 243 0 27 chr5 41327101 41327212 -158302938 - L2 LINE L2 0 3313 3206 272 254 127 17 chr5 41327214 41327332 -158302818 + L1ME LINE L1 5758 5888 -233 2389 145 39 12 chr5 41328054 41328469 -158301681 + MSTB LTR MaLR 1 426 0 517 150 286 8 chr5 41329015 41329148 -158301002 + MER97b DNA MER1_type? 10 179 -874 932 105 46 0 chr5 41329669 41329822 -158300328 + MER5A DNA MER1_type 27 186 -3 1486 171 31 49 chr5 41329967 41330253 -158299897 + AluJb SINE Alu 1 281 -31 282 243 153 0 chr5 41330721 41330832 -158299318 + MIR SINE MIR 48 175 -87 536 81 0 81 chr5 41331065 41331152 -158298998 + MADE1 DNA Mariner 1 80 0 1988 188 41 47 chr5 41331647 41332132 -158298018 + MLT1D LTR MaLR 21 502 -3 336 296 0 0 chr5 41332545 41332626 -158297524 + MIR SINE MIR 59 139 -123 1976 141 27 3 chr5 41333724 41334023 -158296127 + AluSx SINE Alu 1 306 -6 23 33 0 0 chr5 41334349 41334379 -158295771 + AT_rich Low_complexity Low_complexity 1 30 0 180 214 0 24 chr5 41334639 41334681 -158295469 - L2 LINE L2 -50 3222 3182 606 181 237 6 chr5 41334804 41334981 -158295169 + MER20 DNA MER1_type 1 218 -1 471 279 22 7 chr5 41335202 41335338 -158294812 + MIR3 SINE MIR 58 195 -13 22 0 0 0 chr5 41335460 41335482 -158294668 + AT_rich Low_complexity Low_complexity 1 22 0 213 273 58 41 chr5 41336704 41336825 -158293325 - L2 LINE L2 -1 3312 3190 644 259 118 72 chr5 41336882 41337407 -158292743 - MLT1H LTR MaLR 0 549 1 21 36 0 0 chr5 41337471 41337499 -158292651 + AT_rich Low_complexity Low_complexity 1 28 0 2145 127 7 0 chr5 41337566 41337857 -158292293 - AluSc SINE Alu -16 293 1 228 35 0 0 chr5 41338686 41338715 -158291435 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 445 201 222 14 chr5 41338756 41338900 -158291250 - MER5B DNA MER1_type -4 174 1 2434 229 87 13 chr5 41340431 41341547 -158288603 - L1MC4 LINE L1 -149 7893 6541 2206 123 3 7 chr5 41342086 41342386 -158287764 + AluSp SINE Alu 3 301 -12 454 168 42 21 chr5 41342416 41342511 -158287639 - L1MC4 LINE L1 -1497 6545 6449 1901 198 46 50 chr5 41342740 41343239 -158286911 + Charlie4a DNA MER1_type 2 498 -10 216 290 14 0 chr5 41343344 41343413 -158286737 + MIR SINE MIR 192 261 -1 376 239 116 99 chr5 41343468 41343752 -158286398 + MLT1H LTR MaLR 209 497 -52 * 1892 175 101 117 chr5 41343729 41344404 -158285746 + MER63C DNA MER1_type 267 930 0 252 309 0 44 chr5 41344440 41344576 -158285574 - LTR16C LTR ERVL -86 405 276 235 296 12 0 chr5 41345635 41345716 -158284434 + MARNA DNA Mariner 277 358 -228 527 271 81 41 chr5 41345734 41345955 -158284195 - MIR SINE MIR -21 241 12 897 252 111 47 chr5 41345987 41346348 -158283802 - L2 LINE L2 -33 3280 2897 1572 134 112 4 chr5 41346349 41346625 -158283525 + AluJo SINE Alu 1 306 -6 1607 175 12 118 chr5 41346641 41347046 -158283104 + MLT1A1 LTR MaLR 1 362 -3 540 244 71 62 chr5 41347065 41347290 -158282860 - L2 LINE L2 -508 2806 2580 789 268 128 62 chr5 41348029 41348334 -158281816 + L2 LINE L2 2385 2737 -577 2130 120 10 10 chr5 41348334 41348633 -158281517 - AluSp SINE Alu -14 299 1 789 268 128 62 chr5 41348633 41348827 -158281323 + L2 LINE L2 2737 2917 -397 353 213 50 0 chr5 41348929 41349009 -158281141 - MER94 DNA DNA -50 84 1 209 234 75 56 chr5 41349053 41349160 -158280990 - L2 LINE L2 -1 3312 3204 2586 167 31 2 chr5 41351171 41351585 -158278565 + MSTB LTR MaLR 1 426 0 336 48 0 0 chr5 41352207 41352249 -158277901 + (CA)n Simple_repeat Simple_repeat 1 42 0 342 205 51 26 chr5 41352791 41352869 -158277281 + MIR SINE MIR 28 107 -155 551 246 39 30 chr5 41352901 41353104 -158277046 - MIR SINE MIR -55 207 3 212 301 36 0 chr5 41353136 41353219 -158276931 + MIR SINE MIR 124 209 -53 593 239 193 10 chr5 41353386 41353583 -158276567 - MIR SINE MIR -17 245 13 300 27 0 0 chr5 41353656 41353693 -158276457 + (TG)n Simple_repeat Simple_repeat 2 38 0 6983 111 34 8 chr5 41353762 41355294 -158274856 + L1MA2 LINE L1 4737 6304 0 355 323 93 58 chr5 41355929 41356220 -158273930 - L2 LINE L2 -44 3228 2928 2078 140 3 0 chr5 41357107 41357399 -158272751 - AluSx SINE Alu -19 293 1 223 240 0 93 chr5 41357893 41357968 -158272182 - MIR3 SINE MIR -135 73 6 614 250 60 24 chr5 41358044 41358212 -158271938 + MER5B DNA MER1_type 1 174 -4 853 210 113 16 chr5 41358807 41358993 -158271157 - MER63A DNA MER1_type -4 206 3 1607 241 106 34 chr5 41359108 41359807 -158270343 + L2 LINE L2 2302 3313 0 320 305 42 0 chr5 41359911 41360006 -158270144 - MIR3 SINE MIR -33 175 77 682 50 0 0 chr5 41361177 41361257 -158268893 + L1PA8 LINE L1 6075 6154 -18 306 0 0 0 chr5 41361258 41361292 -158268858 + (CA)n Simple_repeat Simple_repeat 2 35 0 800 259 81 24 chr5 41361467 41361714 -158268436 + MIR SINE MIR 1 261 -1 294 299 69 23 chr5 41362661 41362835 -158267315 + L2 LINE L2 2013 2194 -1120 700 244 78 69 chr5 41362851 41363273 -158266877 - HAL1 LINE L1 -34 2473 2048 337 295 139 12 chr5 41363436 41363602 -158266548 - HAL1 LINE L1 -686 1821 1635 474 288 0 0 chr5 41363670 41363802 -158266348 - HAL1 LINE L1 -880 1627 1496 2789 234 107 18 chr5 41363883 41364914 -158265236 - L1ME3 LINE L1 -45 6117 4990 852 282 57 31 chr5 41364909 41365367 -158264783 - HAL1 LINE L1 -1004 1503 1034 * 234 387 65 16 chr5 41365765 41366013 -158264137 + L2 LINE L2 2441 2700 -614 * 629 176 22 52 chr5 41366010 41366109 -158264041 + L2 LINE L2 3182 3277 -36 2464 134 22 3 chr5 41366109 41366466 -158263684 - THE1B LTR MaLR 0 364 1 629 176 22 52 chr5 41366466 41366502 -158263648 + L2 LINE L2 3277 3313 0 308 307 63 94 chr5 41366605 41366892 -158263258 + L2 LINE L2 2806 3083 -189 1117 263 94 38 chr5 41366933 41367305 -158262845 + MLT1I LTR MaLR 9 401 -8 483 308 111 11 chr5 41367443 41367667 -158262483 - MIR SINE MIR -13 249 3 2210 193 100 19 chr5 41368916 41369435 -158260715 - MER74B LTR ERVL -3 619 59 374 271 153 21 chr5 41369478 41369622 -158260528 - MIR SINE MIR -50 212 50 351 192 51 26 chr5 41370408 41370486 -158259664 + MIR SINE MIR 28 107 -155 560 243 45 30 chr5 41370517 41370719 -158259431 - MIR SINE MIR -55 207 3 371 270 103 0 chr5 41370751 41370877 -158259273 + MIR SINE MIR 124 262 0 1231 116 0 29 chr5 41371657 41371830 -158258320 + AluSg/x SINE Alu 134 301 -11 804 297 84 3 chr5 41372544 41372830 -158257320 + MLT1I LTR MaLR 2 310 -99 1194 126 29 29 chr5 41373194 41373400 -158256750 + MLT2C2 LTR ERVL 5 210 -254 30 103 0 0 chr5 41373436 41373543 -158256607 + AT_rich Low_complexity Low_complexity 1 107 0 406 288 46 17 chr5 41374501 41374701 -158255449 - MER63 DNA MER1_type 0 1062 1 376 318 104 10 chr5 41375161 41375353 -158254797 - MER63A DNA MER1_type 0 210 1 264 357 102 0 chr5 41376016 41376114 -158254036 + L2 LINE L2 3126 3233 -39 21 36 0 0 chr5 41376379 41376407 -158253743 + AT_rich Low_complexity Low_complexity 1 28 0 379 0 39 0 chr5 41377395 41377446 -158252704 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 186 43 0 0 chr5 41378805 41378828 -158251322 + (T)n Simple_repeat Simple_repeat 1 23 0 506 289 123 8 chr5 41379688 41379941 -158250209 - L1ME3A LINE L1 -311 5859 5578 267 150 0 0 chr5 41380911 41380951 -158249199 - MER3 DNA MER1_type -165 44 5 530 291 118 8 chr5 41380984 41381238 -158248912 - L1ME3A LINE L1 -311 5859 5578 228 111 0 0 chr5 41381348 41381384 -158248766 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 976 224 90 57 chr5 41381560 41381859 -158248291 - MLT1F LTR MaLR -23 519 211 331 340 0 11 chr5 41382523 41382617 -158247533 + L2 LINE L2 3155 3247 -25 390 311 37 30 chr5 41383245 41383380 -158246770 + L3 LINE CR1 1361 1496 -81 1028 186 0 31 chr5 41383883 41384025 -158246125 - MER5A DNA MER1_type -1 188 52 2390 186 25 48 chr5 41384025 41384542 -158245608 - MLT1D LTR MaLR 0 505 1 1028 186 0 31 chr5 41384542 41384593 -158245557 - MER5A DNA MER1_type -137 52 1 269 324 115 14 chr5 41385004 41385143 -158245007 - MIR SINE MIR -30 232 80 788 236 22 0 chr5 41386669 41386851 -158243299 - MIR SINE MIR -56 206 21 1867 163 30 0 chr5 41386866 41387167 -158242983 - AluJb SINE Alu -2 310 1 323 144 22 33 chr5 41387206 41387296 -158242854 + CT-rich Low_complexity Low_complexity 4 92 0 267 286 0 36 chr5 41387342 41387426 -158242724 - L2 LINE L2 -5 3267 3187 6818 25 28 1 chr5 41387590 41388391 -158241759 + L1PA4 LINE L1 5332 6153 -2 256 214 18 0 chr5 41389411 41389467 -158240683 - MLT2C1 LTR ERVL 0 520 464 247 24 24 24 chr5 41389538 41389558 -158240592 + (GA)n Simple_repeat Simple_repeat 2 21 -21 2258 111 0 10 chr5 41389558 41389864 -158240286 + AluSq SINE Alu 1 303 -10 247 24 24 24 chr5 41389864 41389884 -158240266 + (GA)n Simple_repeat Simple_repeat 20 42 0 2047 153 24 6 chr5 41389887 41390227 -158239923 - MLT2C1 LTR ERVL -51 346 1 498 331 64 0 chr5 41390442 41390614 -158239536 - MER91A DNA MER1_type -13 183 1 768 188 7 0 chr5 41391104 41391242 -158238908 - L1ME3A LINE L1 -8 6162 6024 266 230 103 73 chr5 41391539 41391743 -158238407 + L1ME4a LINE L1 5725 5934 -187 2151 127 0 0 chr5 41391748 41392040 -158238110 + AluSc SINE Alu 1 292 -17 352 339 27 27 chr5 41393095 41393281 -158236869 - MIR3 SINE MIR -3 205 20 1416 224 24 48 chr5 41393537 41393758 -158236392 - LTR16C LTR ERVL -5 486 274 995 169 30 82 chr5 41393758 41393989 -158236161 - MER20 DNA MER1_type 0 219 1 1416 224 24 48 chr5 41393989 41394097 -158236053 - LTR16C LTR ERVL -217 274 165 394 272 30 94 chr5 41394276 41394478 -158235672 - L2 LINE L2 -1 3312 3124 735 245 186 59 chr5 41394515 41394886 -158235264 + L2 LINE L2 2894 3311 -2 489 322 112 29 chr5 41394896 41395288 -158234862 - L2 LINE L2 -206 3066 2643 577 243 43 32 chr5 41395626 41395824 -158234326 + MLT1I LTR MaLR 1 209 -200 243 313 0 0 chr5 41395866 41395933 -158234217 + MIR SINE MIR 20 86 -122 1896 133 0 0 chr5 41395969 41396232 -158233918 - AluSx SINE Alu -16 296 34 735 176 7 37 chr5 41396253 41396389 -158233761 - FLAM_A SINE Alu -1 132 1 191 304 43 61 chr5 41397273 41397388 -158232762 + MIR SINE MIR 24 137 -71 24 0 0 0 chr5 41397760 41397784 -158232366 + AT_rich Low_complexity Low_complexity 1 24 0 345 289 39 56 chr5 41397784 41397964 -158232186 - MIR3 SINE MIR -2 206 30 216 271 40 13 chr5 41398376 41398527 -158231623 + (TA)n Simple_repeat Simple_repeat 1 155 0 276 224 0 0 chr5 41398826 41398893 -158231257 + (TATG)n Simple_repeat Simple_repeat 2 68 0 383 217 0 12 chr5 41400159 41400242 -158229908 + MIR3 SINE MIR 79 160 -48 412 171 89 57 chr5 41400437 41400531 -158229619 + L1MEc LINE L1 25 125 -6271 7445 120 48 18 chr5 41400531 41401155 -158228995 + Tigger3b DNA MER2_type 1 605 -2423 2241 112 3 0 chr5 41401155 41401450 -158228700 - AluSp SINE Alu -16 297 2 7445 120 48 18 chr5 41401450 41402020 -158228130 + Tigger3b DNA MER2_type 605 1231 0 412 171 89 57 chr5 41402020 41402048 -158228102 + L1MEc LINE L1 125 151 -6245 * 3420 232 53 7 chr5 41402043 41402918 -158227232 + L1MEc LINE L1 433 1347 -5049 1807 229 89 14 chr5 41402918 41403336 -158226814 - MLT1D LTR MaLR 0 505 55 1297 198 70 89 chr5 41403336 41403750 -158226400 + MLT1C LTR MaLR 1 406 -61 2252 218 97 16 chr5 41403750 41403980 -158226170 + L1MEc LINE L1 1388 1598 -4798 3840 115 2 6 chr5 41403980 41404493 -158225657 + MER9 LTR ERVK 1 511 0 2252 218 97 16 chr5 41404493 41404973 -158225177 + L1MEc LINE L1 1598 2156 -4240 369 296 12 29 chr5 41405062 41405234 -158224916 + L1MC4 LINE L1 7872 8040 -2 * 4906 147 46 1 chr5 41405226 41406059 -158224091 + L1MB2 LINE L1 5299 6168 -3 1130 256 25 45 chr5 41406080 41406514 -158223636 + L1ME1 LINE L1 5738 6162 -4 486 270 15 7 chr5 41406601 41406738 -158223412 + L1ME LINE L1 5531 5668 -453 583 320 89 32 chr5 41407354 41408260 -158221890 + L1MEc LINE L1 2322 3279 -2936 1932 121 4 0 chr5 41408628 41408893 -158221257 - AluY SINE Alu -10 301 36 782 276 58 33 chr5 41409956 41410325 -158219825 - LTR16C LTR ERVL 0 491 63 440 310 13 0 chr5 41412308 41412463 -158217687 + (TGG)n Simple_repeat Simple_repeat 2 158 0 365 283 134 21 chr5 41412549 41412713 -158217437 + MER5A DNA MER1_type 4 189 0 225 94 0 0 chr5 41413191 41413223 -158216927 + (CA)n Simple_repeat Simple_repeat 1 32 0 1106 263 113 14 chr5 41413324 41413707 -158216443 - MLT1G1 LTR MaLR 0 588 167 344 233 86 43 chr5 41414777 41414893 -158215257 - L2 LINE L2 -11 3302 3182 297 191 0 29 chr5 41414970 41415038 -158215112 + MLT1J1 LTR MaLR 23 88 -358 288 0 0 0 chr5 41416114 41416146 -158214004 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 594 214 148 22 chr5 41416229 41416411 -158213739 + MLT1J2 LTR MaLR 23 227 -223 1244 235 11 0 chr5 41416438 41416719 -158213431 - L1M4 LINE L1 -2448 3698 3415 559 289 31 44 chr5 41416738 41416982 -158213168 + MLT1J2 LTR MaLR 200 447 -3 315 301 64 45 chr5 41416986 41417142 -158213008 + L2 LINE L2 3114 3272 0 222 257 29 14 chr5 41417251 41417321 -158212829 + CT-rich Low_complexity Low_complexity 3 73 0 697 223 128 51 chr5 41417887 41418160 -158211990 + MLT1H LTR MaLR 256 549 0 334 219 0 55 chr5 41418226 41418299 -158211851 + MIR SINE MIR 8 76 -186 473 321 78 14 chr5 41418352 41418570 -158211580 - MIR SINE MIR -27 235 4 190 315 9 46 chr5 41420730 41420838 -158209312 - MIR SINE MIR -110 152 49 1148 241 101 21 chr5 41421054 41421184 -158208966 - LTR16C LTR ERVL 0 491 373 2069 184 31 6 chr5 41421184 41421537 -158208613 + MLT1A1 LTR MaLR 1 362 -3 1148 241 101 21 chr5 41421537 41421734 -158208416 - LTR16C LTR ERVL -118 373 138 244 207 72 81 chr5 41421824 41421935 -158208215 + MLT1L LTR MaLR 110 219 -396 1417 208 74 74 chr5 41422142 41422426 -158207724 - MLT1C LTR MaLR -4 463 177 2144 107 7 10 chr5 41422426 41422726 -158207424 - AluSx SINE Alu -13 299 1 1417 208 74 74 chr5 41422726 41422903 -158207247 - MLT1C LTR MaLR -289 178 2 782 271 104 54 chr5 41423177 41423494 -158206656 - L2 LINE L2 0 3313 2981 590 260 119 78 chr5 41424453 41424504 -158205646 - MLT1J LTR MaLR -28 483 436 1790 171 3 22 chr5 41424504 41424819 -158205331 - AluJb SINE Alu -1 311 3 590 260 119 78 chr5 41424819 41425152 -158204998 - MLT1J LTR MaLR -75 436 83 1824 61 52 0 chr5 41426211 41426441 -158203709 - AluY SINE Alu -4 307 66 197 254 63 48 chr5 41426450 41426513 -158203637 - L2 LINE L2 -2 3270 3207 187 294 65 22 chr5 41426628 41426720 -158203430 + MIR SINE MIR 62 157 -105 1994 123 0 20 chr5 41426927 41427228 -158202922 - AluSx SINE Alu -17 295 1 201 39 0 0 chr5 41427236 41427262 -158202888 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1014 111 14 0 chr5 41427263 41427407 -158202743 - AluSq SINE Alu -33 280 135 307 261 188 24 chr5 41427595 41427796 -158202354 - MIR SINE MIR -28 234 14 347 286 105 0 chr5 41428218 41428323 -158201827 + L2 LINE L2 3140 3255 -17 216 220 17 17 chr5 41429236 41429295 -158200855 - L2 LINE L2 -4 3309 3251 1074 90 159 0 chr5 41432029 41432262 -158197888 - MER7A DNA MER2_type -73 273 6 7402 106 26 4 chr5 41435755 41436873 -158193277 - Tigger1 DNA MER2_type -248 2170 1028 1733 161 68 0 chr5 41438565 41438932 -158191218 - MER57A LTR ERV1 -10 393 2 931 170 10 154 chr5 41438940 41439252 -158190898 - MER57A LTR ERV1 -131 272 6 2362 68 10 0 chr5 41440033 41440326 -158189824 - AluSp SINE Alu -4 309 14 1637 144 44 0 chr5 41440799 41441049 -158189101 + AluJo SINE Alu 24 284 -28 28 48 0 0 chr5 41441049 41441091 -158189059 + AT_rich Low_complexity Low_complexity 1 42 0 531 200 178 38 chr5 41442176 41442361 -158187789 + LOR1a LTR ERV1 233 443 -54 259 264 46 35 chr5 41442398 41442485 -158187665 - L2 LINE L2 -409 2904 2817 292 304 120 43 chr5 41443140 41443324 -158186826 + MIR SINE MIR 15 212 -50 598 253 165 65 chr5 41443469 41443732 -158186418 + LTR33A LTR ERVL 2 238 -285 2214 138 19 24 chr5 41443732 41444109 -158186041 + THE1C LTR MaLR 1 375 0 10360 121 47 23 chr5 41444109 41445478 -158184672 + THE1C-int LTR MaLR 1 1413 -167 1979 112 0 7 chr5 41445478 41445747 -158184403 - AluSq SINE Alu -14 299 33 10360 121 47 23 chr5 41445747 41445920 -158184230 + THE1C-int LTR MaLR 1413 1580 0 2231 129 27 22 chr5 41445922 41446293 -158183857 + THE1C LTR MaLR 3 375 0 598 253 165 65 chr5 41446293 41446499 -158183651 + LTR33A LTR ERVL 238 522 -1 207 0 0 0 chr5 41446574 41446597 -158183553 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4548 176 44 8 chr5 41446870 41448266 -158181884 + L1MB4 LINE L1 4730 6168 -12 476 186 17 5 chr5 41448266 41448873 -158181277 + (TA)n Simple_repeat Simple_repeat 1 614 0 232 255 0 0 chr5 41450026 41450073 -158180077 + L2 LINE L2 3213 3259 -13 572 269 90 63 chr5 41450393 41450694 -158179456 + MLT1L LTR MaLR 227 535 -80 185 263 12 0 chr5 41452027 41452054 -158178096 + (TA)n Simple_repeat Simple_repeat 1 26 -55 1913 144 61 0 chr5 41452054 41452381 -158177769 + MER7A DNA MER2_type 1 345 -1 185 263 12 0 chr5 41452381 41452433 -158177717 + (TA)n Simple_repeat Simple_repeat 26 81 0 270 240 48 19 chr5 41452469 41452573 -158177577 + L1ME LINE L1 5538 5644 -477 696 244 162 24 chr5 41452851 41453237 -158176913 + L1ME4a LINE L1 5597 6057 -64 1849 65 13 0 chr5 41453237 41453466 -158176684 - AluY SINE Alu 0 311 80 696 244 162 24 chr5 41453466 41453537 -158176613 + L1ME4a LINE L1 6057 6117 -4 426 219 119 53 chr5 41454151 41454302 -158175848 - MER5B DNA MER1_type -17 161 1 1951 59 0 59 chr5 41454822 41455121 -158175029 + AluY SINE Alu 29 311 0 725 298 34 21 chr5 41455377 41455615 -158174535 + MIR SINE MIR 22 262 0 217 318 79 60 chr5 41455685 41455937 -158174213 + L2 LINE L2 2830 3086 -186 182 309 36 0 chr5 41456127 41456182 -158173968 + L2 LINE L2 3207 3263 -9 229 217 17 17 chr5 41456391 41456451 -158173699 - MLT1K LTR MaLR -8 580 521 257 284 0 49 chr5 41456642 41456723 -158173427 - MER91C DNA MER1_type -33 107 31 219 226 57 0 chr5 41456992 41457045 -158173105 + (CATG)n Simple_repeat Simple_repeat 4 59 0 222 56 194 0 chr5 41457063 41457099 -158173051 - L2 LINE L2 -1 3271 3229 247 327 83 11 chr5 41457676 41457783 -158172367 + MIR SINE MIR 42 151 -81 * 257 273 0 0 chr5 41457778 41457833 -158172317 - L2 LINE L2 -15 3257 3203 203 219 55 41 chr5 41457845 41457918 -158172232 + MIR3 SINE MIR 122 195 -13 180 274 39 0 chr5 41457878 41457929 -158172221 + L2 LINE L2 2405 2457 -857 * 533 262 93 12 chr5 41458464 41458636 -158171514 + MIR SINE MIR 24 209 -53 247 263 131 0 chr5 41458735 41458834 -158171316 - MIR3 SINE MIR -6 202 91 235 260 26 13 chr5 41458975 41459052 -158171098 - MLT1L LTR MaLR -223 392 315 558 189 0 0 chr5 41459054 41459165 -158170985 + (TG)n Simple_repeat Simple_repeat 2 112 0 559 296 136 8 chr5 41459206 41459463 -158170687 - MLT1L LTR MaLR -325 290 1 199 305 34 0 chr5 41459706 41459765 -158170385 - L2 LINE L2 0 3313 3253 2414 97 0 6 chr5 41459858 41460169 -158169981 - AluSx SINE Alu -3 309 1 634 303 76 20 chr5 41460403 41460799 -158169351 + L1ME LINE L1 5265 5682 -439 22 35 0 0 chr5 41461364 41461393 -158168757 + AT_rich Low_complexity Low_complexity 1 29 0 745 268 31 18 chr5 41461550 41461778 -158168372 - MIR SINE MIR -4 258 28 183 211 35 18 chr5 41461769 41461826 -158168324 - MER5A DNA MER1_type -76 113 56 * 659 257 16 57 chr5 41461848 41462093 -158168057 - MIR SINE MIR -9 253 19 267 31 0 0 chr5 41462855 41462887 -158167263 + (CA)n Simple_repeat Simple_repeat 2 33 0 291 326 62 0 chr5 41463784 41463928 -158166222 - MIR SINE MIR -7 255 103 21 0 0 0 chr5 41465077 41465098 -158165052 + AT_rich Low_complexity Low_complexity 1 21 0 240 35 0 0 chr5 41465172 41465201 -158164949 + (TG)n Simple_repeat Simple_repeat 2 30 0 266 0 29 0 chr5 41465368 41465402 -158164748 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 1456 18 0 0 chr5 41465451 41465614 -158164536 + AluY SINE Alu 149 311 0 2383 71 3 0 chr5 41465738 41466033 -158164117 + AluSp SINE Alu 14 309 -4 866 168 3 158 chr5 41466821 41467137 -158163013 + MER57A LTR ERV1 6 272 -131 2328 156 3 0 chr5 41467145 41467537 -158162613 + MER57A LTR ERV1 2 394 -9 256 129 145 16 chr5 41467589 41467651 -158162499 + LTR54 LTR ERV1 432 501 -9 228 67 0 0 chr5 41468139 41468169 -158161981 + (CA)n Simple_repeat Simple_repeat 2 31 0 4385 109 3 3 chr5 41469195 41469830 -158160320 - MER41B LTR ERV1 0 635 1 230 191 0 32 chr5 41470113 41470176 -158159974 + GA-rich Low_complexity Low_complexity 4 64 0 237 371 48 0 chr5 41470212 41470317 -158159833 + MIR3 SINE MIR 60 169 -39 2325 112 0 6 chr5 41471211 41471525 -158158625 - AluSx SINE Alu 0 312 1 1681 150 36 4 chr5 41472330 41472583 -158157567 + AluJo SINE Alu 24 284 -28 28 48 0 0 chr5 41472583 41472625 -158157525 + AT_rich Low_complexity Low_complexity 1 42 0 211 369 86 20 chr5 41472860 41473058 -158157092 + L2 LINE L2 2902 3112 -160 212 246 35 0 chr5 41475344 41475401 -158154749 + (TATG)n Simple_repeat Simple_repeat 2 60 0 266 274 149 2 chr5 41475416 41475550 -158154600 - MIR3 SINE MIR -47 161 45 430 340 155 9 chr5 41476017 41476346 -158153804 - L2 LINE L2 -609 2705 2329 225 132 15 29 chr5 41477639 41477707 -158152443 + T-rich Low_complexity Low_complexity 5 71 0 280 235 38 30 chr5 41477726 41477858 -158152292 + T-rich Low_complexity Low_complexity 3 135 0 207 0 0 0 chr5 41477976 41477999 -158152151 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 527 241 95 68 chr5 41478290 41478700 -158151450 + HAL1b LINE L1 150 570 -778 280 148 66 0 chr5 41478706 41478777 -158151373 + L1MA9 LINE L1 6241 6333 -1 5510 229 95 18 chr5 41479084 41480847 -158149303 - L1ME2 LINE L1 -20 6144 4081 2194 97 3 26 chr5 41480847 41481156 -158148994 - AluSg SINE Alu -8 302 1 5510 229 95 18 chr5 41481156 41482219 -158147931 - L1ME2 LINE L1 -2083 4081 3100 205 221 156 66 chr5 41482265 41482387 -158147763 - L2 LINE L2 -1300 2014 1882 256 313 0 0 chr5 41482591 41482671 -158147479 + LTR67 LTR ERVL 102 181 -376 490 318 83 14 chr5 41482705 41482994 -158147156 + LTR67 LTR ERVL 244 552 -5 323 280 107 40 chr5 41482994 41483144 -158147006 + MIR SINE MIR 54 213 -49 180 0 0 0 chr5 41483698 41483718 -158146432 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr5 41483841 41483862 -158146288 + AT_rich Low_complexity Low_complexity 1 21 0 14440 127 14 38 chr5 41486604 41489083 -158141067 - Tigger1 DNA MER2_type 0 2418 1 581 331 39 11 chr5 41489795 41490055 -158140095 - MLT1L LTR MaLR -91 524 258 1605 218 86 31 chr5 41490249 41490759 -158139391 - MLT1H LTR MaLR -4 545 8 555 211 34 34 chr5 41490790 41490937 -158139213 + MIR SINE MIR 78 224 -38 2196 117 0 13 chr5 41491031 41491330 -158138820 + AluSx SINE Alu 1 295 -17 991 177 0 0 chr5 41491937 41492101 -158138049 + Tigger3(Golem) DNA MER2_type 2863 3026 -3 232 226 32 0 chr5 41492388 41492450 -158137700 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 5625 30 1 0 chr5 41492502 41493160 -158136990 - L1PA4 LINE L1 -4 6151 5493 561 262 21 0 chr5 41493466 41493607 -158136543 + MIR SINE MIR 11 154 -108 481 295 92 12 chr5 41494076 41494249 -158135901 - MER91A DNA MER1_type -7 189 3 490 236 134 4 chr5 41494401 41494716 -158135434 + LTR16B LTR ERVL 11 388 -76 260 186 0 0 chr5 41494893 41494936 -158135214 - 5S rRNA rRNA -78 43 1 23 0 0 0 chr5 41495538 41495561 -158134589 + AT_rich Low_complexity Low_complexity 1 23 0 806 172 0 16 chr5 41495567 41495695 -158134455 + AluJb SINE Alu 1 126 -186 24 96 0 0 chr5 41495695 41495768 -158134382 + AT_rich Low_complexity Low_complexity 1 73 0 2313 179 58 32 chr5 41495777 41496222 -158133928 + MER74A LTR ERVL 14 477 -81 2388 96 3 0 chr5 41496222 41496523 -158133627 - AluSq SINE Alu -11 302 1 2313 179 58 32 chr5 41496523 41496608 -158133542 + MER74A LTR ERVL 477 558 0 280 274 0 105 chr5 41496944 41497068 -158133082 - MIR SINE MIR -32 230 120 252 250 118 0 chr5 41497086 41497154 -158132996 - MIR3 SINE MIR -11 197 122 840 189 4 0 chr5 41499131 41499366 -158130784 + (TG)n Simple_repeat Simple_repeat 1 236 0 21 0 0 0 chr5 41499535 41499556 -158130594 + AT_rich Low_complexity Low_complexity 1 21 0 257 311 227 20 chr5 41499652 41499903 -158130247 + L3b LINE CR1 1157 1459 -124 261 250 110 10 chr5 41499989 41500089 -158130061 - L1ME4a LINE L1 -1 6120 6011 21 57 0 0 chr5 41500641 41500676 -158129474 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr5 41500749 41500778 -158129372 + AT_rich Low_complexity Low_complexity 1 29 0 470 303 85 71 chr5 41501676 41502208 -158127942 - MLT1K LTR MaLR 0 588 50 437 301 79 15 chr5 41502349 41502615 -158127535 - L1ME4a LINE L1 -345 5776 5494 1869 167 3 7 chr5 41502728 41503028 -158127122 - AluJb SINE Alu -13 299 1 327 200 0 90 chr5 41503530 41503630 -158126520 + MIR SINE MIR 117 207 -55 6201 87 27 0 chr5 41503652 41504296 -158125854 + L1PA13 LINE L1 4132 4757 -1406 2144 118 3 0 chr5 41504296 41504593 -158125557 + AluSg SINE Alu 1 298 -12 6201 87 27 0 chr5 41504593 41506004 -158124146 + L1PA13 LINE L1 4757 6161 -2 692 187 43 7 chr5 41506378 41506517 -158123633 + MIR SINE MIR 46 189 -73 396 0 0 0 chr5 41506517 41506561 -158123589 + (TA)n Simple_repeat Simple_repeat 1 44 0 261 233 50 0 chr5 41506765 41506825 -158123325 + L2 LINE L2 3251 3313 0 25 31 0 0 chr5 41506913 41506945 -158123205 + AT_rich Low_complexity Low_complexity 1 32 0 216 97 0 0 chr5 41507312 41507343 -158122807 + (GAA)n Simple_repeat Simple_repeat 2 32 0 467 306 120 61 chr5 41508419 41509126 -158121024 - L2 LINE L2 -33 3280 2521 351 0 0 0 chr5 41510179 41510218 -158119932 + (CA)n Simple_repeat Simple_repeat 1 39 0 244 241 88 44 chr5 41510219 41510356 -158119794 + L1ME2 LINE L1 1385 1527 -5332 588 318 35 21 chr5 41510359 41510645 -158119505 + L1ME2 LINE L1 1655 1944 -5003 973 244 7 3 chr5 41510654 41510949 -158119201 + L1ME2 LINE L1 3578 3873 -3084 * 2841 226 89 20 chr5 41510941 41511114 -158119036 + L1ME2 LINE L1 4972 5132 -1843 653 216 8 0 chr5 41511114 41511239 -158118911 - FLAM_C SINE Alu -7 126 1 2841 226 89 20 chr5 41511239 41512879 -158117271 + L1ME2 LINE L1 5132 6966 -9 742 107 0 41 chr5 41513287 41513408 -158116742 + FLAM_C SINE Alu 23 138 -5 300 244 161 36 chr5 41513418 41513591 -158116559 + MIR SINE MIR 58 253 -9 301 319 140 32 chr5 41514204 41514483 -158115667 - L3 LINE CR1 -7 1570 1262 180 307 114 64 chr5 41514584 41514724 -158115426 + L2 LINE L2 3102 3248 -24 2219 246 89 26 chr5 41514811 41515528 -158114622 - MER21B LTR ERV1 -60 803 42 334 254 0 0 chr5 41515530 41515601 -158114549 - MER21B LTR ERV1 -774 89 19 277 226 54 32 chr5 41515599 41515692 -158114458 - MER21B LTR ERV1 -757 106 12 * 930 183 204 21 chr5 41515903 41516187 -158113963 - MER2 DNA MER2_type 0 345 10 569 296 139 7 chr5 41516339 41516619 -158113531 - L3 LINE CR1 -382 1195 879 279 257 138 18 chr5 41516889 41516998 -158113152 - MER5A DNA MER1_type -66 123 2 395 242 10 0 chr5 41517104 41517203 -158112947 - MER58 DNA MER1_type -3 2417 2318 1417 206 94 28 chr5 41517222 41517658 -158112492 + MLT1C LTR MaLR 1 465 -2 278 164 0 60 chr5 41517660 41517727 -158112423 - MER58 DNA MER1_type -244 97 35 222 299 206 10 chr5 41517841 41518035 -158112115 + L2 LINE L2 3080 3311 -2 411 304 76 23 chr5 41518064 41518235 -158111915 - MIR3 SINE MIR -26 182 3 1808 216 102 18 chr5 41518686 41519255 -158110895 - MLT1E3 LTR MaLR -7 617 1 226 303 33 16 chr5 41519400 41519522 -158110628 + LTR67 LTR ERVL 429 552 -5 187 369 15 0 chr5 41520837 41520902 -158109248 + MIR SINE MIR 8 73 -189 512 256 72 31 chr5 41520902 41521097 -158109053 - MLT1J2 LTR MaLR 0 450 248 646 150 14 68 chr5 41521139 41521286 -158108864 - MLT1J2 LTR MaLR -305 145 7 181 292 108 0 chr5 41521287 41521352 -158108798 + MIR SINE MIR 66 137 -125 1963 182 43 0 chr5 41521358 41521393 -158108757 - MLT2D LTR ERVL -8 406 374 393 22 0 0 chr5 41521393 41521439 -158108711 + (TG)n Simple_repeat Simple_repeat 1 46 0 1963 182 43 0 chr5 41521439 41521776 -158108374 - MLT2D LTR ERVL -40 374 18 282 265 15 0 chr5 41521797 41521865 -158108285 + MIR SINE MIR 188 256 -6 255 259 54 54 chr5 41522016 41522128 -158108022 - MIR SINE MIR -43 219 108 25 0 0 0 chr5 41522392 41522417 -158107733 + AT_rich Low_complexity Low_complexity 1 25 0 356 294 123 25 chr5 41522636 41522799 -158107351 + MIR3 SINE MIR 13 191 -17 183 286 0 20 chr5 41523695 41523744 -158106406 + MIR SINE MIR 74 121 -87 318 188 129 35 chr5 41523874 41523959 -158106191 - MIR SINE MIR -71 191 99 1639 169 47 51 chr5 41523959 41524351 -158105799 + MLT1B LTR MaLR 1 593 0 387 259 37 44 chr5 41524471 41524606 -158105544 + MER5B DNA MER1_type 26 159 -19 1986 240 53 35 chr5 41525441 41526079 -158104071 - L1ME3 LINE L1 -29 6133 5484 191 212 88 0 chr5 41526531 41526579 -158103571 + MIR SINE MIR 93 146 -116 482 347 61 66 chr5 41526606 41527171 -158102979 - L2 LINE L2 -19 3253 2694 256 258 21 21 chr5 41527208 41527305 -158102845 + A-rich Low_complexity Low_complexity 2 98 0 555 274 107 0 chr5 41527330 41527722 -158102428 + L1ME3A LINE L1 5045 5481 -683 1245 225 138 0 chr5 41527737 41528093 -158102057 + L1ME3A LINE L1 5591 5995 -175 263 261 14 0 chr5 41529044 41529106 -158101044 + MER112 DNA MER1_type 9 71 -189 421 179 199 13 chr5 41529106 41529257 -158100893 - MER104 DNA Tc2 -1 179 1 375 260 0 29 chr5 41529335 41529439 -158100711 + MER112 DNA MER1_type 154 254 -6 619 314 69 0 chr5 41530441 41530616 -158099534 + MER91A DNA MER1_type 1 187 -9 409 291 174 48 chr5 41531420 41531839 -158098311 + L2 LINE L2 2842 3313 0 330 257 10 30 chr5 41531884 41531985 -158098165 + MER94 DNA DNA 2 100 -34 380 281 115 31 chr5 41532539 41532731 -158097419 + MIR SINE MIR 46 253 -9 270 0 0 0 chr5 41532803 41532833 -158097317 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1697 171 3 14 chr5 41532835 41533121 -158097029 - AluJo SINE Alu -24 288 6 793 286 74 0 chr5 41533132 41533349 -158096801 + MIR SINE MIR 3 235 -27 1220 178 156 58 chr5 41533788 41534204 -158095946 - MSTB2 LTR MaLR 0 457 1 495 140 0 11 chr5 41535190 41535283 -158094867 + MER53 DNA DNA 92 183 -6 194 313 15 0 chr5 41535289 41535356 -158094794 - MIR SINE MIR -112 96 29 546 234 6 91 chr5 41535561 41535617 -158094533 - MER5B DNA MER1_type -1 177 118 2154 120 0 7 chr5 41535617 41535909 -158094241 + AluSx SINE Alu 10 299 -13 546 234 6 91 chr5 41535909 41536027 -158094123 - MER5B DNA MER1_type -60 118 18 189 0 0 0 chr5 41536117 41536138 -158094012 + (TG)n Simple_repeat Simple_repeat 2 22 0 439 280 118 32 chr5 41538923 41539227 -158090923 + L1MC4a LINE L1 5318 5395 -726 330 45 0 0 chr5 41539227 41539271 -158090879 + (CA)n Simple_repeat Simple_repeat 2 45 0 439 280 118 32 chr5 41539271 41539492 -158090658 + L1MC4a LINE L1 5395 5595 -526 2003 160 0 13 chr5 41542729 41543066 -158087084 - AluJo SINE Alu 0 334 2 410 213 193 66 chr5 41543130 41543327 -158086823 - MIR SINE MIR -28 234 13 192 287 138 11 chr5 41543420 41543514 -158086636 - L2 LINE L2 0 3313 3208 198 194 0 0 chr5 41543735 41543771 -158086379 - MIR3 SINE MIR -11 197 162 250 206 128 20 chr5 41544460 41544562 -158085588 - L1MC4 LINE L1 0 8042 7930 398 157 0 33 chr5 41544733 41544854 -158085296 + (TA)n Simple_repeat Simple_repeat 2 118 0 180 111 0 0 chr5 41544938 41544965 -158085185 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 378 57 0 0 chr5 41544986 41545039 -158085111 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 1885 144 0 7 chr5 41545048 41545332 -158084818 - AluSx SINE Alu -30 282 1 473 272 40 13 chr5 41545360 41545584 -158084566 - L1ME2 LINE L1 -209 5955 5726 593 286 30 15 chr5 41545593 41545859 -158084291 - L1ME4a LINE L1 -184 5937 5668 379 263 124 29 chr5 41545904 41546041 -158084109 + MIR SINE MIR 7 156 -106 200 276 40 13 chr5 41546173 41546249 -158083901 + MIR SINE MIR 179 256 -6 248 250 0 11 chr5 41546251 41546343 -158083807 + (CA)n Simple_repeat Simple_repeat 2 92 0 263 26 51 0 chr5 41548098 41548137 -158082013 + (CGGAA)n Simple_repeat Simple_repeat 5 45 0 219 114 0 0 chr5 41548139 41548174 -158081976 + (GGGA)n Simple_repeat Simple_repeat 3 37 0 195 0 39 0 chr5 41548426 41548452 -158081698 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 1931 96 4 0 chr5 41548452 41548703 -158081447 - AluSx SINE Alu -28 284 33 290 274 115 18 chr5 41548874 41548987 -158081163 + MIR SINE MIR 19 142 -66 2196 116 0 0 chr5 41549704 41549998 -158080152 + AluSq SINE Alu 1 294 -19 228 312 64 46 chr5 41552960 41553069 -158077081 - L2 LINE L2 -12 3260 3150 421 264 8 40 chr5 41553120 41553245 -158076905 + MLT1L LTR MaLR 18 138 -477 2029 134 10 10 chr5 41553245 41553552 -158076598 - AluSx SINE Alu -5 307 1 796 84 19 0 chr5 41553567 41553674 -158076476 - AluY SINE Alu -2 309 201 410 307 40 27 chr5 41553676 41553826 -158076324 - MER5B DNA MER1_type -11 167 16 1045 276 66 39 chr5 41553832 41554190 -158075960 + MLT1L LTR MaLR 136 483 -132 736 253 6 6 chr5 41554190 41554368 -158075782 - MER5B DNA MER1_type 0 178 1 1045 276 66 39 chr5 41554368 41554416 -158075734 + MLT1L LTR MaLR 483 528 -87 899 238 5 5 chr5 41554416 41554605 -158075545 + MER5A DNA MER1_type 1 189 0 1045 276 66 39 chr5 41554605 41554664 -158075486 + MLT1L LTR MaLR 528 615 0 264 229 0 0 chr5 41555986 41556047 -158074103 - L1ME2 LINE L1 -10 6154 6094 22 0 0 0 chr5 41556062 41556084 -158074066 + AT_rich Low_complexity Low_complexity 1 22 0 186 279 0 0 chr5 41556692 41556735 -158073415 - MIR3 SINE MIR -48 160 118 294 95 0 0 chr5 41557353 41557395 -158072755 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 666 87 0 0 chr5 41558553 41558645 -158071505 + AluSc SINE Alu 218 309 0 627 281 54 50 chr5 41560013 41560255 -158069895 + MIR SINE MIR 20 262 0 201 129 0 0 chr5 41560292 41560323 -158069827 + (CA)n Simple_repeat Simple_repeat 1 31 0 1832 153 7 0 chr5 41560376 41560657 -158069493 + AluSx SINE Alu 1 283 -29 205 274 20 0 chr5 41560724 41560775 -158069375 - L2 LINE L2 -10 3262 3211 208 127 36 0 chr5 41561997 41562052 -158068098 + (CA)n Simple_repeat Simple_repeat 2 58 0 2973 85 8 8 chr5 41562097 41562472 -158067678 + THE1C LTR MaLR 1 375 0 358 245 118 10 chr5 41562510 41562612 -158067538 - L2 LINE L2 0 3272 3160 449 231 52 58 chr5 41562766 41562842 -158067308 - MIR SINE MIR -12 250 175 192 40 0 0 chr5 41562842 41562867 -158067283 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2271 106 0 0 chr5 41562869 41563162 -158066988 - AluSc SINE Alu -16 293 1 449 231 52 58 chr5 41563162 41563255 -158066895 - MIR SINE MIR -88 174 79 4422 116 65 9 chr5 41563431 41563783 -158066367 + L1PB1 LINE L1 5430 5761 -390 207 0 0 0 chr5 41563783 41563806 -158066344 + (TA)n Simple_repeat Simple_repeat 2 24 0 4422 116 65 9 chr5 41563806 41564134 -158066016 + L1PB1 LINE L1 5761 6148 -3 180 0 0 0 chr5 41565125 41565145 -158065005 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1111 255 61 21 chr5 41566021 41566347 -158063803 + L1ME4a LINE L1 5528 5866 -255 268 325 130 0 chr5 41568117 41568240 -158061910 + L2 LINE L2 3171 3309 -4 372 284 55 2 chr5 41569337 41569449 -158060701 - MIR SINE MIR -87 121 2 1719 190 46 9 chr5 41569603 41569930 -158060220 - MER58B DNA MER1_type 0 341 3 2208 127 3 0 chr5 41570621 41570921 -158059229 - AluSx SINE Alu -9 303 3 358 267 8 53 chr5 41572173 41572304 -158057846 + L2 LINE L2 2935 3059 -213 245 327 45 0 chr5 41572825 41572935 -158057215 + LTR16A1 LTR ERVL 179 293 -164 267 242 16 0 chr5 41572936 41572998 -158057152 - MIR SINE MIR -160 102 40 634 311 40 13 chr5 41573203 41573428 -158056722 + MIR SINE MIR 20 250 -12 984 247 57 4 chr5 41575733 41575960 -158054190 - LTR16A LTR ERVL 0 450 212 222 317 164 0 chr5 41576071 41576175 -158053975 - L2 LINE L2 -11 3302 3182 299 250 16 0 chr5 41576764 41576828 -158053322 + LTR67 LTR ERVL 491 555 -2 303 292 90 35 chr5 41576834 41576978 -158053172 - MIR SINE MIR -87 175 24 233 291 27 36 chr5 41578924 41579034 -158051116 - L1ME4a LINE L1 -12 6109 6001 480 347 144 21 chr5 41579065 41579525 -158050625 - L2 LINE L2 -62 3210 2695 571 199 23 0 chr5 41579587 41579758 -158050392 + GA-rich Low_complexity Low_complexity 3 177 0 213 39 0 0 chr5 41580557 41580583 -158049567 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 315 304 36 14 chr5 41580719 41580857 -158049293 + MER112 DNA MER1_type 38 178 -82 2631 164 118 23 chr5 41580879 41581445 -158048705 + L1ME3A LINE L1 5550 6169 -1 263 257 40 14 chr5 41581445 41581519 -158048631 + MER112 DNA MER1_type 178 253 -7 21 0 0 0 chr5 41581565 41581586 -158048564 + AT_rich Low_complexity Low_complexity 1 21 0 2419 99 0 0 chr5 41633650 41633954 -157996196 - AluSq SINE Alu -9 304 1 464 139 7 115 chr5 41633954 41633978 -157996172 - L1 LINE L1 -853 5293 5268 2114 188 11 3 chr5 41633978 41634340 -157995810 - MLT1A1 LTR MaLR 0 365 1 464 139 7 115 chr5 41634340 41634452 -157995698 - L1 LINE L1 -878 5268 5155 231 279 41 68 chr5 41634534 41634608 -157995542 + L1ME LINE L1 5547 5617 -504 972 206 38 5 chr5 41634608 41634817 -157995333 + MER20 DNA MER1_type 1 216 -3 231 279 41 68 chr5 41634817 41634889 -157995261 + L1ME LINE L1 5617 5689 -432 273 338 15 0 chr5 41634956 41635089 -157995061 + L1ME LINE L1 5636 5770 -351 234 240 208 10 chr5 41635682 41635778 -157994372 - L2 LINE L2 -1 3312 3198 1020 136 180 26 chr5 41636281 41636509 -157993641 - MSTA LTR MaLR -165 263 1 381 289 60 85 chr5 41636529 41636882 -157993268 - L1ME LINE L1 -457 5664 5321 29 0 0 0 chr5 41637039 41637068 -157993082 + AT_rich Low_complexity Low_complexity 1 29 0 1566 177 11 14 chr5 41637117 41637443 -157992707 + AluJo SINE Alu 4 328 0 209 282 9 55 chr5 41637611 41637721 -157992429 + L2 LINE L2 2393 2497 -817 241 200 33 17 chr5 41638671 41638731 -157991419 + LTR33A LTR ERVL 463 523 0 798 267 0 31 chr5 41640029 41640254 -157989896 + MER58A DNA MER1_type 4 221 -3 479 273 139 6 chr5 41640859 41641024 -157989126 + MIR3 SINE MIR 16 202 -6 263 174 0 0 chr5 41641058 41641104 -157989046 + MIR SINE MIR 217 262 0 1331 164 76 40 chr5 41641424 41641674 -157988476 + AluJb SINE Alu 1 259 -53 478 206 147 18 chr5 41642263 41642433 -157987717 + LTR16C LTR ERVL 298 489 -2 2256 105 0 3 chr5 41642721 41643015 -157987135 - AluSx SINE Alu -19 293 1 967 296 82 30 chr5 41643324 41643786 -157986364 + MLT1K LTR MaLR 33 518 -70 2337 136 68 2 chr5 41644135 41644532 -157985618 - L1MC1 LINE L1 -66 6267 5845 3430 120 21 11 chr5 41644722 41645279 -157984871 - L1MC1 LINE L1 -489 5844 5282 * 6426 80 5 12 chr5 41645262 41645447 -157984703 - L1PA14 LINE L1 0 6161 5976 3529 118 8 4 chr5 41645447 41645956 -157984194 - MER9 LTR ERVK 0 511 1 6426 80 5 12 chr5 41645956 41646654 -157983496 - L1PA14 LINE L1 -185 5976 5285 2296 65 0 4 chr5 41646935 41647214 -157982936 + AluY SINE Alu 1 278 -33 357 43 0 0 chr5 41647214 41647261 -157982889 + (CA)n Simple_repeat Simple_repeat 2 48 0 1001 136 101 0 chr5 41647261 41647430 -157982720 + MER46A DNA MER2_type 2 187 -49 195 100 0 0 chr5 41647459 41647489 -157982661 + (CA)n Simple_repeat Simple_repeat 2 31 0 365 267 167 64 chr5 41648744 41649055 -157981095 + Charlie8 DNA MER1_type 55 397 -2020 538 329 102 5 chr5 41650341 41650557 -157979593 - MIR SINE MIR -6 256 20 311 272 115 30 chr5 41650986 41651139 -157979011 + MIR SINE MIR 31 191 -41 207 69 0 0 chr5 41651613 41651642 -157978508 + (TG)n Simple_repeat Simple_repeat 2 30 0 182 206 0 0 chr5 41651818 41651852 -157978298 + MIR SINE MIR 98 131 -131 426 270 0 0 chr5 41651877 41651966 -157978184 + MER119 DNA MER1_type 5 93 -490 2398 109 62 14 chr5 41651986 41652344 -157977806 - THE1C LTR MaLR 0 375 1 636 205 16 0 chr5 41652351 41652478 -157977672 + MER119 DNA MER1_type 454 582 -1 383 243 48 95 chr5 41654002 41654219 -157975931 + MIR SINE MIR 33 245 -17 1890 166 0 0 chr5 41654229 41654531 -157975619 - AluJb SINE Alu -10 302 1 730 279 125 18 chr5 41656296 41656576 -157973574 - MLT1I LTR MaLR 0 409 100 464 223 93 7 chr5 41656842 41656981 -157973169 - MIR SINE MIR -3 259 109 262 246 0 18 chr5 41656981 41657038 -157973112 - LTR16C LTR ERVL 0 491 436 475 279 92 26 chr5 41657081 41657310 -157972840 - LTR16C LTR ERVL -150 341 98 425 19 19 0 chr5 41657716 41657770 -157972380 + AluY SINE Alu 2 56 -254 649 128 99 41 chr5 41658422 41658594 -157971556 - Charlie7 DNA MER1_type -2 2610 2429 312 257 59 20 chr5 41658576 41658677 -157971473 - Charlie7 DNA MER1_type -2507 105 1 * 290 277 126 17 chr5 41658694 41658813 -157971337 + MIR SINE MIR 19 150 -58 2443 82 0 7 chr5 41658815 41659120 -157971030 + AluSq SINE Alu 1 303 -10 325 299 0 0 chr5 41659179 41659275 -157970875 + MER20B DNA MER1_type 103 202 -17 340 208 125 21 chr5 41659569 41659665 -157970485 - MIR SINE MIR -80 128 23 2344 101 10 0 chr5 41659898 41660196 -157969954 + AluSq SINE Alu 2 302 -11 1031 274 132 8 chr5 41660292 41660679 -157969471 - MLT1J LTR MaLR -38 473 39 418 210 50 0 chr5 41660872 41660972 -157969178 + MIR SINE MIR 93 197 -65 470 335 52 6 chr5 41662051 41662224 -157967926 + MIR SINE MIR 21 201 -61 2259 40 20 20 chr5 41662804 41663102 -157967048 + AluY SINE Alu 3 300 -11 183 289 0 0 chr5 41663186 41663224 -157966926 + L2 LINE L2 3149 3186 -86 325 284 33 93 chr5 41665243 41665426 -157964724 + MIR SINE MIR 32 203 -59 316 272 0 96 chr5 41666023 41666148 -157964002 - MLT1H LTR MaLR -10 539 427 240 306 0 0 chr5 41666411 41666473 -157963677 - MLT1I LTR MaLR -290 119 58 2080 106 3 30 chr5 41666850 41667152 -157962998 - AluSp SINE Alu -19 294 1 24 32 0 0 chr5 41667428 41667459 -157962691 + AT_rich Low_complexity Low_complexity 1 31 0 204 40 0 0 chr5 41668331 41668356 -157961794 + (ATG)n Simple_repeat Simple_repeat 2 26 0 208 309 37 25 chr5 41668362 41668443 -157961707 - MIR SINE MIR -161 101 20 3030 202 119 27 chr5 41668502 41669340 -157960810 + L1MD3 LINE L1 7081 7995 0 578 268 15 82 chr5 41670685 41670737 -157959413 - MIR SINE MIR 0 262 208 1670 146 62 0 chr5 41670737 41670997 -157959153 - AluJb SINE Alu -3 309 34 578 268 15 82 chr5 41670997 41671213 -157958937 - MIR SINE MIR -54 208 12 1079 125 9 0 chr5 41671468 41671641 -157958509 + MSTB LTR MaLR 5 197 -260 682 192 26 64 chr5 41671721 41671877 -157958273 + MSTB LTR MaLR 149 298 -128 2478 228 178 63 chr5 41671887 41672421 -157957729 - L2 LINE L2 -4 3309 2838 2152 120 3 7 chr5 41672421 41672720 -157957430 - AluSx SINE Alu -14 298 1 2478 228 178 63 chr5 41672720 41673652 -157956498 - L2 LINE L2 -475 2838 1671 2108 128 10 0 chr5 41674004 41674301 -157955849 + AluSx SINE Alu 1 300 -12 531 293 63 11 chr5 41674386 41674560 -157955590 + MIR SINE MIR 24 206 -56 2055 115 37 7 chr5 41676011 41676307 -157953843 + AluSq SINE Alu 6 310 -3 2331 258 117 36 chr5 41676309 41677283 -157952867 + HAL1 LINE L1 210 1262 -1245 460 248 62 25 chr5 41677551 41677712 -157952438 + MIR SINE MIR 21 187 -75 258 32 0 0 chr5 41677909 41677940 -157952210 + (TG)n Simple_repeat Simple_repeat 2 32 0 183 184 0 0 chr5 41680003 41680041 -157950109 + (TG)n Simple_repeat Simple_repeat 2 39 0 209 287 64 64 chr5 41680984 41681078 -157949072 + L2 LINE L2 2960 3053 -219 741 234 5 31 chr5 41681638 41681830 -157948320 - L2 LINE L2 0 3313 3127 275 233 27 14 chr5 41681893 41681966 -157948184 - L2 LINE L2 -348 2924 2851 231 149 15 104 chr5 41682037 41682104 -157948046 - L2 LINE L2 -4 3268 3208 44106 32 21 1 chr5 41682206 41688240 -157941910 - L1PA3 LINE L1 0 6155 1 350 21 21 0 chr5 41688399 41688446 -157941704 + (TG)n Simple_repeat Simple_repeat 1 48 0 547 302 25 20 chr5 41689039 41689241 -157940909 - L3 LINE CR1 -125 1452 1250 2208 119 3 0 chr5 41689299 41689602 -157940548 + AluSx SINE Alu 1 304 -8 29 0 0 0 chr5 41689602 41689631 -157940519 + AT_rich Low_complexity Low_complexity 1 29 0 2066 89 65 14 chr5 41689800 41690093 -157940057 - AluSx SINE Alu -4 308 1 1011 173 6 18 chr5 41690108 41690276 -157939874 - FRAM SINE Alu 0 166 1 336 296 179 6 chr5 41691579 41691741 -157938409 + MIR SINE MIR 26 215 -47 453 257 45 34 chr5 41693238 41693411 -157936739 + MIR SINE MIR 20 190 -62 201 297 31 0 chr5 41693903 41693967 -157936183 - L2 LINE L2 -213 3059 2994 1224 188 131 25 chr5 41693967 41694275 -157935875 + MLT1A1 LTR MaLR 1 374 0 2015 49 4 8 chr5 41694298 41694542 -157935608 + L1PA7 LINE L1 5910 6152 -2 609 244 64 17 chr5 41695235 41695407 -157934743 + MIR3 SINE MIR 1 180 -28 214 337 12 47 chr5 41695426 41695512 -157934638 + L3b LINE CR1 1370 1452 -131 654 317 31 9 chr5 41695566 41695790 -157934360 - MIR SINE MIR -30 232 4 679 257 0 0 chr5 41696083 41696227 -157933923 - MIR SINE MIR -10 252 109 279 0 0 0 chr5 41696782 41696813 -157933337 + (TG)n Simple_repeat Simple_repeat 2 32 0 595 271 82 67 chr5 41697910 41698446 -157931704 + L1MD3 LINE L1 5324 5866 -300 22 56 0 0 chr5 41698733 41698769 -157931381 + AT_rich Low_complexity Low_complexity 1 36 0 311 167 17 0 chr5 41698775 41698835 -157931315 - MIR3 SINE MIR -11 197 137 3510 189 11 29 chr5 41698862 41699624 -157930526 + L1MB1 LINE L1 3295 4042 -2104 3307 181 22 40 chr5 41699626 41699895 -157930255 + L1MB1 LINE L1 5264 5536 -632 342 109 18 0 chr5 41699895 41699950 -157930200 + HSMAR2 DNA Mariner 647 702 -600 3307 181 22 40 chr5 41699950 41700573 -157929577 + L1MB1 LINE L1 5536 6163 -5 197 340 10 19 chr5 41702436 41702539 -157927611 + MER5A DNA MER1_type 88 189 0 417 237 40 40 chr5 41703101 41703253 -157926897 + MIR SINE MIR 35 186 -76 2270 125 0 0 chr5 41703756 41704061 -157926089 + AluSx SINE Alu 1 305 -7 376 277 90 6 chr5 41704329 41704520 -157925630 + MIR SINE MIR 3 206 -56 256 188 0 87 chr5 41704565 41704634 -157925516 - MLT1I LTR MaLR 0 409 347 551 216 18 0 chr5 41704765 41704876 -157925274 - MLT1I LTR MaLR -270 139 27 914 235 5 5 chr5 41705661 41705874 -157924276 - MIR SINE MIR -26 236 24 1378 139 118 113 chr5 41706823 41707248 -157922902 - MSTA LTR MaLR -1 427 1 206 328 30 50 chr5 41707603 41707801 -157922349 + L2 LINE L2 2163 2356 -958 305 302 161 10 chr5 41708031 41708223 -157921927 + MIR SINE MIR 36 256 -6 307 336 26 17 chr5 41708312 41708428 -157921722 - L2 LINE L2 -13 3259 3143 186 376 46 0 chr5 41708433 41708542 -157921608 + L2 LINE L2 2648 2761 -553 399 195 41 81 chr5 41708900 41709023 -157921127 - LTR33 LTR ERVL -27 494 377 1992 145 3 10 chr5 41709152 41709449 -157920701 + AluSx SINE Alu 1 295 -17 431 293 212 20 chr5 41711289 41711632 -157918518 + ERVL LTR ERVL 1893 2273 -3381 2473 74 3 0 chr5 41711713 41712023 -157918127 + AluY SINE Alu 1 311 0 326 221 0 0 chr5 41712054 41712122 -157918028 + MIR SINE MIR 137 204 -58 387 303 69 29 chr5 41712287 41712462 -157917688 + ERVL LTR ERVL 2847 3028 -2736 804 308 54 7 chr5 41712596 41712872 -157917278 + ERVL LTR ERVL 3191 3479 -2285 1251 296 101 24 chr5 41712888 41713510 -157916640 + ERVL LTR ERVL 3396 4065 -1699 452 317 60 53 chr5 41713590 41713871 -157916279 + ERVL LTR ERVL 4305 4587 -1177 845 224 130 27 chr5 41713957 41714180 -157915970 + MLT1I LTR MaLR 99 344 -65 470 194 14 22 chr5 41714224 41714363 -157915787 + CT-rich Low_complexity Low_complexity 1 138 0 397 272 78 32 chr5 41714634 41714851 -157915299 + LTR33A LTR ERVL 297 523 0 221 217 33 17 chr5 41715451 41715511 -157914639 - MIR SINE MIR -174 88 28 588 297 35 0 chr5 41716568 41716770 -157913380 - MIR SINE MIR 0 262 54 7788 146 13 21 chr5 41717889 41718752 -157911398 + HSMAR2 DNA Mariner 1 851 -451 1829 109 31 4 chr5 41718752 41719008 -157911142 + AluSc SINE Alu 28 290 -19 7788 146 13 21 chr5 41719008 41719456 -157910694 + HSMAR2 DNA Mariner 851 1301 -1 203 323 10 21 chr5 41719733 41719829 -157910321 + CT-rich Low_complexity Low_complexity 3 97 0 495 260 24 4 chr5 41720397 41720550 -157909600 - MLT1H LTR MaLR -265 170 21 188 283 28 75 chr5 41720798 41720904 -157909246 + MIR3 SINE MIR 87 187 -21 420 231 16 33 chr5 41721135 41721256 -157908894 + MLT1I LTR MaLR 273 391 -18 195 320 51 0 chr5 41721345 41721454 -157908696 + MIR SINE MIR 38 152 -67 244 337 40 0 chr5 41721581 41721682 -157908468 - MIR SINE MIR -78 184 80 250 311 0 0 chr5 41722340 41722401 -157907749 + MER5A DNA MER1_type 46 106 -83 915 240 81 0 chr5 41722527 41722748 -157907402 + L1MB1 LINE L1 5925 6163 -5 250 178 55 0 chr5 41722828 41722901 -157907249 + CT-rich Low_complexity Low_complexity 4 80 0 605 277 134 27 chr5 41723705 41724116 -157906034 + L2 LINE L2 2828 3282 -31 386 246 127 0 chr5 41724148 41724266 -157905884 - MIR SINE MIR -24 238 106 1183 217 14 0 chr5 41724332 41724553 -157905597 + MER58A DNA MER1_type 1 224 0 197 373 29 0 chr5 41724702 41724804 -157905346 + MIR SINE MIR 33 137 -71 195 162 0 0 chr5 41724820 41724857 -157905293 + (TAA)n Simple_repeat Simple_repeat 1 37 0 1126 273 50 43 chr5 41725040 41725439 -157904711 + MLT1I LTR MaLR 6 407 -2 3881 59 0 0 chr5 41726032 41726200 -157903950 + L1PA12 LINE L1 5329 5487 -681 3881 108 0 2 chr5 41726200 41726747 -157903403 + L1PA12 LINE L1 5621 6168 0 3881 59 0 0 chr5 41726747 41726787 -157903363 + L1PA12 LINE L1 5487 6168 0 1291 204 70 32 chr5 41728014 41728357 -157901793 - MLT1A1 LTR MaLR 0 365 10 30 0 0 0 chr5 41728521 41728551 -157901599 + AT_rich Low_complexity Low_complexity 1 30 0 241 352 38 0 chr5 41729525 41729630 -157900520 - MIR SINE MIR -68 140 32 1294 121 97 0 chr5 41729654 41729861 -157900289 + MER30 DNA MER1_type 4 230 0 334 319 39 44 chr5 41731636 41731818 -157898332 - MER5A DNA MER1_type -2 187 7 199 306 0 14 chr5 41732099 41732171 -157897979 + MIR3 SINE MIR 90 160 -48 2051 117 13 7 chr5 41732298 41732596 -157897554 + AluSg SINE Alu 1 300 -10 841 256 22 22 chr5 41732637 41732860 -157897290 + MLT1G1 LTR MaLR 3 225 -370 827 307 95 34 chr5 41732887 41733528 -157896622 - L2 LINE L2 -556 2758 2079 1694 216 134 10 chr5 41733533 41733995 -157896155 - MER39 LTR ERV1 -7 700 5 333 319 91 13 chr5 41734053 41734285 -157895865 - L2 LINE L2 -1636 1678 1429 15611 42 1 48 chr5 41734752 41736366 -157893784 + L1P2 LINE L1 3387 4843 -1312 2379 89 3 0 chr5 41736366 41736668 -157893482 + AluY SINE Alu 1 303 -8 15611 42 1 48 chr5 41736668 41737538 -157892612 + L1P2 LINE L1 4843 5753 -402 799 143 46 93 chr5 41737652 41737868 -157892282 + THE1C LTR MaLR 170 375 0 545 255 62 31 chr5 41738719 41738911 -157891239 + MIR SINE MIR 20 217 -45 1753 184 125 10 chr5 41739237 41739628 -157890522 - MER63B DNA MER1_type 0 436 1 500 272 129 26 chr5 41740527 41740759 -157889391 + MIR SINE MIR 7 262 0 2967 129 72 4 chr5 41741365 41741867 -157888283 - L1MA8 LINE L1 -10 6281 5746 304 242 81 16 chr5 41742271 41742395 -157887755 + MIR SINE MIR 73 204 -58 548 248 0 75 chr5 41742399 41742514 -157887636 + MIR SINE MIR 14 115 -147 2471 61 3 0 chr5 41742514 41742810 -157887340 - AluY SINE Alu -14 297 1 548 248 0 75 chr5 41742810 41742855 -157887295 + MIR SINE MIR 115 162 -100 1890 125 4 14 chr5 41743118 41743399 -157886751 + AluSx SINE Alu 23 300 -12 471 271 89 49 chr5 41743548 41743898 -157886252 - L1ME4a LINE L1 -207 5914 5551 372 280 67 64 chr5 41744384 41744666 -157885484 - L1ME4a LINE L1 -1111 5035 4753 680 286 28 0 chr5 41745177 41745355 -157884795 + MLT1I LTR MaLR 225 407 -2 393 172 210 48 chr5 41745930 41746109 -157884041 + MIR SINE MIR 19 213 -49 2213 120 0 3 chr5 41746115 41746414 -157883736 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr5 41746451 41746473 -157883677 + AT_rich Low_complexity Low_complexity 1 22 0 602 255 19 0 chr5 41746734 41746891 -157883259 + MIR SINE MIR 81 240 -22 217 333 43 0 chr5 41747436 41747553 -157882597 + MIR SINE MIR 84 205 -57 313 113 57 24 chr5 41748922 41749046 -157881104 + (CTATA)n Simple_repeat Simple_repeat 3 130 0 193 67 22 44 chr5 41749146 41749191 -157880959 + (CTATA)n Simple_repeat Simple_repeat 2 45 0 1600 109 53 12 chr5 41749229 41749476 -157880674 - AluSx SINE Alu -55 257 1 420 239 62 0 chr5 41750103 41750216 -157879934 - L2 LINE L2 -2 3311 3192 197 237 102 51 chr5 41750298 41750416 -157879734 - L2 LINE L2 -910 2404 2281 276 321 36 29 chr5 41750757 41750897 -157879253 + MIR3 SINE MIR 2 142 -66 646 212 47 35 chr5 41750917 41751087 -157879063 + MER5A DNA MER1_type 18 189 0 3451 117 24 22 chr5 41751614 41752118 -157878032 - MER1A DNA MER1_type -6 523 19 1420 292 70 54 chr5 41752479 41753161 -157876989 - MER115 DNA AcHobo 0 693 1 1983 141 30 0 chr5 41754438 41754735 -157875415 + AluSx SINE Alu 1 306 -6 242 287 35 0 chr5 41755420 41755507 -157874643 + MER117 DNA MER1_type 3 92 -105 298 303 153 18 chr5 41755553 41755880 -157874270 - L2 LINE L2 -850 2464 2094 277 146 0 0 chr5 41755933 41755974 -157874176 + MIR SINE MIR 111 151 -111 556 314 50 4 chr5 41755986 41756225 -157873925 + HAL1 LINE L1 2 251 -2256 238 210 97 16 chr5 41756353 41756415 -157873735 - L1MC/D LINE L1 -2014 5794 5728 39 84 0 0 chr5 41756578 41756673 -157873477 + AT_rich Low_complexity Low_complexity 1 95 0 2066 41 0 8 chr5 41757155 41757398 -157872752 + L1PA5 LINE L1 5908 6148 -6 207 191 0 43 chr5 41757528 41757575 -157872575 + GA-rich Low_complexity Low_complexity 1 45 0 195 186 0 0 chr5 41757868 41757911 -157872239 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1683 144 107 0 chr5 41757980 41758243 -157871907 - AluSp SINE Alu -22 291 1 1504 176 37 34 chr5 41758502 41758797 -157871353 - AluJo SINE Alu -16 296 1 511 263 126 17 chr5 41758995 41759170 -157870980 + MIR SINE MIR 9 202 -60 231 177 81 0 chr5 41759234 41759296 -157870854 + GA-rich Low_complexity Low_complexity 1 67 0 21 0 0 0 chr5 41760057 41760078 -157870072 + AT_rich Low_complexity Low_complexity 1 21 0 870 182 113 86 chr5 41761399 41761690 -157868460 + MLT1J2 LTR MaLR 7 305 -145 1659 204 76 39 chr5 41761690 41761748 -157868402 + Charlie4a DNA MER1_type 21 75 -1886 2458 76 0 0 chr5 41761748 41762050 -157868100 + AluY SINE Alu 1 302 -9 1659 204 76 39 chr5 41762050 41762453 -157867697 + Charlie4a DNA MER1_type 75 499 -9 322 244 16 114 chr5 41762468 41762591 -157867559 + MLT1J2 LTR MaLR 267 377 -73 229 265 168 34 chr5 41763716 41764039 -157866111 - L1ME4a LINE L1 -114 6007 5650 21 0 0 0 chr5 41764098 41764119 -157866031 + AT_rich Low_complexity Low_complexity 1 21 0 382 259 19 71 chr5 41764452 41764670 -157865480 + MIR3 SINE MIR 2 251 -11 343 350 50 0 chr5 41764715 41764835 -157865315 + L2 LINE L2 3187 3312 -1 271 279 0 15 chr5 41765346 41765414 -157864736 + MIR3 SINE MIR 139 205 -3 2473 123 18 39 chr5 41766333 41766715 -157863435 + THE1C LTR MaLR 1 374 -1 11483 107 9 29 chr5 41766716 41768328 -157861822 + THE1C-int LTR MaLR 1 1580 0 2523 114 13 42 chr5 41768328 41768714 -157861436 + THE1C LTR MaLR 1 375 0 1140 219 37 0 chr5 41768809 41769024 -157861126 + MER58A DNA MER1_type 2 224 0 1706 176 24 7 chr5 41769273 41769568 -157860582 - AluJo SINE Alu -10 302 3 201 354 53 18 chr5 41769750 41769863 -157860287 - MIR SINE MIR -95 167 51 234 0 0 0 chr5 41769945 41769971 -157860179 + (T)n Simple_repeat Simple_repeat 1 26 0 1334 270 94 11 chr5 41771287 41771661 -157858489 - MLT1I LTR MaLR -4 405 1 721 249 13 16 chr5 41771793 41771970 -157858180 - MER5B DNA MER1_type -4 185 1 407 279 16 39 chr5 41771978 41772001 -157858149 + MIR3 SINE MIR 19 41 -167 2075 114 3 20 chr5 41772001 41772349 -157857801 - AluSq SINE Alu 0 313 3 407 279 16 39 chr5 41772349 41772499 -157857651 + MIR3 SINE MIR 41 193 -15 257 223 116 33 chr5 41773543 41773664 -157856486 + L1ME4a LINE L1 5984 6114 -7 439 221 21 0 chr5 41773677 41773772 -157856378 + MIR SINE MIR 84 180 -82 296 272 0 12 chr5 41773775 41773856 -157856294 + MER116 DNA Mariner 1 80 0 622 230 63 11 chr5 41774013 41774187 -157855963 - L1ME1 LINE L1 -49 6117 5935 1990 123 0 3 chr5 41774548 41774872 -157855278 + AluSx SINE Alu 1 323 0 303 341 0 0 chr5 41775454 41775583 -157854567 + MIR SINE MIR 10 138 -124 292 264 60 54 chr5 41775614 41775781 -157854369 + L2 LINE L2 2897 3064 -208 1071 281 12 0 chr5 41775866 41776119 -157854031 - MIR SINE MIR -2 260 5 477 264 200 0 chr5 41776154 41776309 -157853841 - MER5A DNA MER1_type 0 189 4 720 191 79 11 chr5 41776341 41776519 -157853631 - Charlie1b DNA MER1_type -15 508 319 * 820 255 10 10 chr5 41776515 41776711 -157853439 - Charlie1b DNA MER1_type -327 196 1 293 0 27 0 chr5 41776877 41776914 -157853236 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2132 67 10 67 chr5 41776916 41777216 -157852934 - AluSp SINE Alu -30 283 1 321 203 29 14 chr5 41777887 41777956 -157852194 - L3 LINE CR1 -3 1574 1505 * 400 194 61 0 chr5 41777944 41778042 -157852108 + MER5A DNA MER1_type 9 112 -77 952 219 6 6 chr5 41778227 41778405 -157851745 + MER5B DNA MER1_type 1 178 0 2395 94 10 0 chr5 41779426 41779733 -157850417 + AluSg SINE Alu 1 310 0 24 53 0 0 chr5 41779787 41779825 -157850325 + AT_rich Low_complexity Low_complexity 1 38 0 2790 148 40 23 chr5 41780149 41780628 -157849522 - L1MB1 LINE L1 0 6168 5682 28 0 0 0 chr5 41780950 41780978 -157849172 + AT_rich Low_complexity Low_complexity 1 28 0 651 167 28 0 chr5 41781256 41781364 -157848786 - LTR8 LTR ERV1 -107 584 474 184 330 170 0 chr5 41781895 41782007 -157848143 - MIR3 SINE MIR -1 207 77 1156 156 19 28 chr5 41782938 41783150 -157847000 + L1PA16 LINE L1 5947 6156 -10 371 0 68 0 chr5 41783462 41783521 -157846629 + (TG)n Simple_repeat Simple_repeat 2 64 0 392 335 28 16 chr5 41783692 41783874 -157846276 - MIR3 SINE MIR -15 193 10 2029 138 7 13 chr5 41784572 41784876 -157845274 - AluSq SINE Alu -11 302 1 272 202 70 70 chr5 41784886 41785000 -157845150 - L1MC/D LINE L1 -1988 5820 5707 3195 234 61 17 chr5 41785612 41786670 -157843480 + L1ME3A LINE L1 4962 6077 -93 203 382 54 43 chr5 41786835 41787021 -157843129 + L2 LINE L2 3073 3260 -12 479 234 42 72 chr5 41787145 41787312 -157842838 + L1ME3A LINE L1 6003 6164 -6 717 291 113 17 chr5 41787343 41787697 -157842453 + L1MC4a LINE L1 5477 5864 -1944 211 197 0 82 chr5 41788793 41788854 -157841296 - MIR SINE MIR -137 71 16 691 268 112 22 chr5 41788869 41789093 -157841057 + MIR SINE MIR 18 261 -1 275 370 54 0 chr5 41789206 41789409 -157840741 + L3 LINE CR1 1357 1570 -7 21 36 0 0 chr5 41793152 41793180 -157836970 + AT_rich Low_complexity Low_complexity 1 28 0 831 293 63 0 chr5 41793815 41794054 -157836096 - MIR SINE MIR -1 261 8 234 243 206 28 chr5 41794539 41794646 -157835504 - MIR SINE MIR -62 146 21 3429 210 69 43 chr5 41794831 41795655 -157834495 - L1ME1 LINE L1 -5 6161 5282 2014 147 0 0 chr5 41795655 41795955 -157834195 + AluSx SINE Alu 2 301 -11 3429 210 69 43 chr5 41795955 41796319 -157833831 - L1ME1 LINE L1 -884 5282 4929 206 284 86 25 chr5 41798281 41798362 -157831788 + MER5A DNA MER1_type 97 182 -7 370 317 35 35 chr5 41798703 41798905 -157831245 + MIR SINE MIR 15 216 -46 197 268 24 61 chr5 41798903 41798985 -157831165 + L3b LINE CR1 1155 1233 -350 * 361 267 63 84 chr5 41800630 41800821 -157829329 - MLT1J2 LTR MaLR 0 450 264 276 234 6 6 chr5 41800904 41800997 -157829153 - MLT1J1 LTR MaLR -331 119 26 1506 155 39 28 chr5 41801376 41801690 -157828460 + AluJb SINE Alu 1 312 0 2573 62 0 0 chr5 41801956 41802262 -157827888 - AluY SINE Alu -5 306 1 358 308 57 25 chr5 41803076 41803235 -157826915 + MIR SINE MIR 29 192 -70 277 388 89 28 chr5 41804483 41804841 -157825309 + L2 LINE L2 2866 3245 -27 312 83 0 0 chr5 41805717 41805765 -157824385 + (TG)n Simple_repeat Simple_repeat 2 49 0 1794 266 29 40 chr5 41805913 41806491 -157823659 + L1MA8 LINE L1 469 1040 -6449 15263 186 31 20 chr5 41806587 41811115 -157819035 + L1MA8 LINE L1 1897 6501 -1209 2323 107 3 0 chr5 41811115 41811413 -157818737 - AluSx SINE Alu -13 299 1 15263 186 31 20 chr5 41811413 41812635 -157817515 + L1MA8 LINE L1 6501 7708 -2 774 291 86 30 chr5 41812928 41813419 -157816731 + LTR33 LTR ERVL 3 520 -1 565 162 45 0 chr5 41813726 41813837 -157816313 + L1MB1 LINE L1 6047 6162 -6 751 122 0 154 chr5 41813930 41814151 -157815999 - MER53 DNA DNA -2 187 1 245 352 16 32 chr5 41814263 41814388 -157815762 + MIR SINE MIR 22 144 -118 1104 249 97 20 chr5 41814845 41815235 -157814915 - LTR16C LTR ERVL 0 491 72 700 122 9 0 chr5 41815736 41815843 -157814307 - AluSg/x SINE Alu -9 301 194 189 0 0 0 chr5 41815844 41815865 -157814285 + (T)n Simple_repeat Simple_repeat 1 21 0 871 214 0 7 chr5 41815877 41816031 -157814119 + FRAM SINE Alu 1 152 -24 2484 52 0 7 chr5 41816040 41816345 -157813805 + AluY SINE Alu 1 303 -8 1846 153 14 0 chr5 41817271 41817552 -157812598 + AluSx SINE Alu 1 285 -27 220 299 197 8 chr5 41818218 41818335 -157811815 + MIR3 SINE MIR 36 174 -34 947 239 59 0 chr5 41818396 41818618 -157811532 + MIR SINE MIR 25 259 -3 378 0 0 0 chr5 41818696 41818738 -157811412 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2004 110 0 39 chr5 41818752 41819034 -157811116 - AluSx SINE Alu -37 275 5 386 339 52 60 chr5 41819034 41819277 -157810873 + L2 LINE L2 2918 3160 -112 573 76 0 13 chr5 41819396 41819475 -157810675 + MER30 DNA MER1_type 1 78 -152 276 208 0 0 chr5 41819675 41819723 -157810427 + MER30 DNA MER1_type 183 230 0 450 294 75 0 chr5 41819733 41819879 -157810271 + MIR SINE MIR 68 224 -38 1800 192 76 0 chr5 41821352 41821774 -157808376 + Charlie4a DNA MER1_type 28 481 -27 830 193 5 96 chr5 41821805 41822023 -157808127 - MER58A DNA MER1_type 0 224 27 524 184 40 46 chr5 41823210 41823362 -157806788 - MER112 DNA MER1_type -93 167 17 308 223 23 140 chr5 41823548 41823813 -157806337 - MER112 DNA MER1_type -6 254 21 310 323 94 38 chr5 41823830 41824118 -157806032 - L3 LINE CR1 -54 1523 1220 190 326 128 0 chr5 41824612 41824698 -157805452 + MIR3 SINE MIR 64 160 -48 226 225 0 0 chr5 41824833 41824873 -157805277 + MIR3 SINE MIR 150 189 -19 666 206 8 0 chr5 41825129 41825255 -157804895 - AluJb SINE Alu -7 305 179 1307 139 139 43 chr5 41825428 41825686 -157804464 - AluJo SINE Alu -24 288 6 639 200 54 87 chr5 41826924 41827109 -157803041 + MIR SINE MIR 63 241 -21 1093 187 75 13 chr5 41827264 41827569 -157802581 - MER33 DNA MER1_type 0 324 1 640 250 149 16 chr5 41827622 41827830 -157802320 - MIR SINE MIR 0 262 35 185 178 67 0 chr5 41829135 41829180 -157800970 - MER5A DNA MER1_type -18 171 124 16830 135 19 57 chr5 41929240 41929796 -157700354 - L1PA12 LINE L1 -2753 4831 4255 2163 124 13 3 chr5 41929796 41930102 -157700048 - AluSc SINE Alu 0 309 1 16830 135 19 57 chr5 41930102 41932790 -157697360 - L1PA12 LINE L1 -3329 4255 485 21 36 0 0 chr5 41933327 41933355 -157696795 + AT_rich Low_complexity Low_complexity 1 28 0 1647 214 81 37 chr5 41934015 41934450 -157695700 + MSTB2 LTR MaLR 4 457 0 201 279 101 47 chr5 41934502 41934631 -157695519 - MIR3 SINE MIR -58 150 15 219 328 78 26 chr5 41935594 41935710 -157694440 + MER5A DNA MER1_type 64 185 -4 337 230 7 149 chr5 41938208 41938356 -157691794 - MIR3 SINE MIR -3 205 79 312 27 0 0 chr5 41938811 41938848 -157691302 + (CA)n Simple_repeat Simple_repeat 2 38 0 480 316 51 0 chr5 41938988 41939146 -157691004 - MIR SINE MIR -94 168 3 207 0 0 0 chr5 41940302 41940325 -157689825 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1968 94 20 0 chr5 41940359 41940614 -157689536 - AluSq SINE Alu -53 260 1 222 327 0 0 chr5 41941359 41941411 -157688739 - L2 LINE L2 -20 3293 3242 1989 139 171 29 chr5 41941473 41941636 -157688514 + MSTA LTR MaLR 1 140 -288 2108 110 0 26 chr5 41941636 41941946 -157688204 + AluSp SINE Alu 1 302 -11 1989 139 171 29 chr5 41941946 41942157 -157687993 + MSTA LTR MaLR 140 428 0 463 312 129 58 chr5 41942544 41942695 -157687455 - L2 LINE L2 -572 2742 2603 2316 120 133 13 chr5 41942695 41943077 -157687073 - MSTA LTR MaLR 0 428 1 463 312 129 58 chr5 41943077 41943646 -157686504 - L2 LINE L2 -711 2603 1971 224 135 0 19 chr5 41943773 41943825 -157686325 + (TAAAAA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr5 41944123 41944145 -157686005 + AT_rich Low_complexity Low_complexity 1 22 0 1802 118 0 4 chr5 41944205 41944460 -157685690 + AluSx SINE Alu 1 254 -58 1430 218 104 47 chr5 41944560 41945197 -157684953 + L1MC5 LINE L1 7254 7926 -35 2268 100 3 3 chr5 41945382 41945681 -157684469 + AluSg SINE Alu 1 299 -11 1834 155 3 24 chr5 41947134 41947431 -157682719 + AluSx SINE Alu 1 291 -21 2324 185 59 27 chr5 41947859 41948302 -157681848 - MSTB2 LTR MaLR 0 457 1 250 349 0 12 chr5 41949205 41949291 -157680859 + MIR SINE MIR 20 104 -158 217 272 71 42 chr5 41949794 41949938 -157680212 + MIR3 SINE MIR 1 152 -96 203 152 0 0 chr5 41950213 41950246 -157679904 + (TG)n Simple_repeat Simple_repeat 2 34 0 467 298 16 0 chr5 41950403 41950524 -157679626 - L2 LINE L2 -8 3305 3183 781 255 33 127 chr5 41951823 41952344 -157677806 - MARNA DNA Mariner -39 547 76 21 57 0 0 chr5 41952710 41952745 -157677405 + AT_rich Low_complexity Low_complexity 1 35 0 1645 166 0 58 chr5 41952780 41953093 -157677057 - AluJb SINE Alu -17 295 1 844 134 0 0 chr5 41953616 41953735 -157676415 - AluSg/x SINE Alu -8 302 184 1026 157 0 76 chr5 41953840 41953908 -157676242 + L1PB3 LINE L1 5971 6043 -111 2164 126 0 0 chr5 41953908 41954210 -157675940 + AluSc SINE Alu 1 302 -7 1026 157 0 76 chr5 41954210 41954339 -157675811 + L1PB3 LINE L1 6043 6153 -1 266 118 39 0 chr5 41954359 41954410 -157675740 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2181 198 73 44 chr5 41955123 41955628 -157674522 - MLT2B1 LTR ERVL 0 520 1 206 368 63 21 chr5 41955924 41956114 -157674036 + MIR3 SINE MIR 7 204 -4 187 352 113 0 chr5 41956131 41956273 -157673877 - MIR SINE MIR -16 246 89 772 334 32 16 chr5 41956705 41957311 -157672839 - L1MC4a LINE L1 -1922 5886 5276 26 74 0 0 chr5 41957418 41957472 -157672678 + AT_rich Low_complexity Low_complexity 1 54 0 369 266 102 33 chr5 41957566 41957870 -157672280 - L1MC4a LINE L1 -1444 4702 4378 252 278 153 14 chr5 41958114 41958258 -157671892 - L1MC4a LINE L1 -2409 3737 3574 410 301 145 15 chr5 41958289 41958551 -157671599 + L2 LINE L2 2384 2679 -635 2610 174 51 14 chr5 41958619 41959112 -157671038 - LTR53 LTR ERVL -8 511 1 536 315 4 22 chr5 41959121 41959375 -157670775 + L2 LINE L2 2775 3023 -290 452 294 47 28 chr5 41959450 41959720 -157670430 - L1ME3A LINE L1 -284 5886 5610 266 256 0 26 chr5 41960309 41960387 -157669763 + CT-rich Low_complexity Low_complexity 3 78 0 451 262 35 21 chr5 41960817 41960962 -157669188 + MIR3 SINE MIR 19 165 -43 2274 101 0 10 chr5 41960968 41961266 -157668884 + AluSc SINE Alu 1 295 -14 207 364 83 8 chr5 41962250 41962382 -157667768 - MIR3 SINE MIR -64 144 3 243 242 152 20 chr5 41962461 41962560 -157667590 + LTR33A LTR ERVL 412 523 0 350 312 9 0 chr5 41962611 41962720 -157667430 - MIR3 SINE MIR -35 173 64 434 324 54 0 chr5 41962795 41962980 -157667170 + MIR SINE MIR 46 240 -22 1976 119 0 0 chr5 41963392 41963660 -157666490 - AluSg SINE Alu -9 301 34 936 289 141 5 chr5 41964047 41964445 -157665705 - LTR33 LTR ERVL -63 458 7 205 446 161 15 chr5 41965910 41966376 -157663774 + L2 LINE L2 2273 2806 -508 224 167 21 21 chr5 41967247 41967295 -157662855 + CT-rich Low_complexity Low_complexity 5 52 0 207 0 0 0 chr5 41967507 41967530 -157662620 + (TG)n Simple_repeat Simple_repeat 1 23 0 586 315 86 21 chr5 41967724 41968112 -157662038 + LTR16B LTR ERVL 5 464 0 1425 112 0 23 chr5 41968242 41968457 -157661693 + AluSq SINE Alu 1 210 -103 31 26 0 0 chr5 41969143 41969181 -157660969 + AT_rich Low_complexity Low_complexity 1 38 0 2197 79 14 0 chr5 41969181 41969458 -157660692 - AluSq SINE Alu -24 289 9 232 235 35 71 chr5 41969999 41970084 -157660066 - MIR SINE MIR -3 259 178 256 319 21 11 chr5 41970255 41970349 -157659801 - MIR SINE MIR -137 125 31 695 137 114 0 chr5 41972199 41972330 -157657820 - L1MA9 LINE L1 0 6312 6167 2632 181 19 72 chr5 41972473 41973115 -157657035 - LTR9 LTR ERV1 0 612 5 1965 107 8 0 chr5 41973387 41973649 -157656501 - AluSq SINE Alu -49 264 1 1997 54 149 4 chr5 41973714 41973975 -157656175 + AluY SINE Alu 1 299 -12 22 0 0 0 chr5 41974421 41974443 -157655707 + AT_rich Low_complexity Low_complexity 1 22 0 545 242 6 30 chr5 41974465 41974491 -157655659 - L1MA10 LINE L1 -1 6333 6308 1097 264 22 32 chr5 41974491 41974862 -157655288 - L1ME1 LINE L1 -14 6152 5786 1776 181 0 22 chr5 41975272 41975587 -157654563 - AluJo SINE Alu -4 308 1 187 203 156 0 chr5 41976750 41976814 -157653336 + L2 LINE L2 2976 3049 -223 22 56 0 0 chr5 41976871 41976907 -157653243 + AT_rich Low_complexity Low_complexity 1 36 0 507 317 97 34 chr5 41977109 41977459 -157652691 - MLT1K LTR MaLR -15 573 202 221 213 43 0 chr5 41977868 41977915 -157652235 + GA-rich Low_complexity Low_complexity 4 52 0 472 170 9 18 chr5 41978618 41978730 -157651420 + GA-rich Low_complexity Low_complexity 2 112 0 2387 99 3 3 chr5 41978865 41979178 -157650972 + AluSp SINE Alu 1 313 0 1580 157 0 12 chr5 41980672 41980914 -157649236 + AluJb SINE Alu 1 239 -73 320 188 16 0 chr5 41982103 41982167 -157647983 - L2 LINE L2 -1 3312 3248 328 321 154 37 chr5 41983167 41983348 -157646802 + L2 LINE L2 1294 1452 -1862 216 0 0 0 chr5 41983348 41983372 -157646778 + (CCCCCT)n Simple_repeat Simple_repeat 2 25 0 328 321 154 37 chr5 41983372 41983778 -157646372 + L2 LINE L2 1452 1991 -1323 2512 87 0 0 chr5 41983778 41984089 -157646061 - AluSx SINE Alu -1 311 1 328 321 154 37 chr5 41984089 41984253 -157645897 + L2 LINE L2 1991 2134 -1180 2186 120 3 3 chr5 41985321 41985622 -157644528 - AluSq SINE Alu -12 301 1 2349 212 2 5 chr5 41986251 41986676 -157643474 + MLT1F LTR MaLR 1 424 -118 587 165 9 28 chr5 41986733 41986842 -157643308 + MLT1F LTR MaLR 428 534 -8 412 301 58 34 chr5 41986885 41987231 -157642919 + LTR16A1 LTR ERVL 1 444 -6 1033 331 50 15 chr5 41987391 41987787 -157642363 + ERVL LTR ERVL 4026 4435 -1329 316 272 41 33 chr5 41987880 41988050 -157642100 + ERVL LTR ERVL 5162 5335 -204 969 298 37 45 chr5 41988134 41988580 -157641570 + LTR16A LTR ERVL 8 448 -2 2815 88 3 8 chr5 41989149 41989524 -157640626 - THE1C LTR MaLR 0 375 3 483 293 80 7 chr5 41989604 41989946 -157640204 + LTR33 LTR ERVL 12 430 -91 1535 157 68 23 chr5 41990403 41990723 -157639427 + MER61B LTR ERV1 1 423 -2 190 273 193 34 chr5 41990773 41990949 -157639201 - MIR SINE MIR -12 250 47 1203 110 0 0 chr5 41992214 41992389 -157637761 - AluSg/x SINE Alu 0 305 131 224 234 0 0 chr5 41993067 41993114 -157637036 + GA-rich Low_complexity Low_complexity 1 47 0 186 43 0 0 chr5 41993712 41993735 -157636415 + (TC)n Simple_repeat Simple_repeat 1 23 0 764 183 0 0 chr5 41994791 41994917 -157635233 + MSTB1 LTR MaLR 1 126 -306 2841 153 76 25 chr5 41994920 41994964 -157635186 - MER21A LTR ERV1 0 931 891 3593 187 57 7 chr5 41994964 41995663 -157634487 + MER50 LTR ERV1 1 734 0 2841 153 76 25 chr5 41995663 41996147 -157634003 - MER21A LTR ERV1 -40 891 376 1081 172 131 0 chr5 41996152 41996373 -157633777 - MER21A LTR ERV1 -667 264 15 2205 113 0 7 chr5 41996428 41996730 -157633420 - AluSx SINE Alu -12 300 1 4019 178 35 54 chr5 41996730 41997453 -157632697 - MER21A-int LTR ERV1 -3 4188 3485 478 0 32 0 chr5 41997453 41997515 -157632635 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 4019 178 35 54 chr5 41997515 41997718 -157632432 - MER21A-int LTR ERV1 -706 3485 3280 9971 173 14 33 chr5 41997729 41998255 -157631895 - MER21A-int LTR ERV1 -1258 2933 2399 2485 40 10 3 chr5 41998255 41998555 -157631595 + AluY SINE Alu 1 302 -9 9971 173 14 33 chr5 41998555 41999834 -157630316 - MER21A-int LTR ERV1 -1792 2399 1162 2281 80 13 20 chr5 41999842 42000142 -157630008 + AluY SINE Alu 13 310 -1 6196 152 12 17 chr5 42000229 42001263 -157628887 - MER4B-int LTR ERV1 -2646 4112 3085 2758 182 32 29 chr5 42001322 42001876 -157628274 - MER21A LTR ERV1 0 931 376 1300 166 72 0 chr5 42001881 42002116 -157628034 - MER21A LTR ERV1 -667 264 13 225 0 0 0 chr5 42002125 42002150 -157628000 + (TG)n Simple_repeat Simple_repeat 2 26 0 418 127 84 0 chr5 42002161 42002232 -157627918 + MSTB1 LTR MaLR 125 201 -231 17918 57 1 3 chr5 42002245 42004453 -157625697 + L1PA3 LINE L1 4 2205 -3941 22126 40 3 2 chr5 42004553 42007284 -157622866 + L1P LINE L1 788 3519 -2627 25915 27 11 9 chr5 42007384 42011289 -157618861 + L1PA3 LINE L1 2240 6152 -3 1240 148 38 13 chr5 42011315 42011551 -157618599 + MSTB1 LTR MaLR 188 429 -3 378 261 130 7 chr5 42011606 42011744 -157618406 - MIR SINE MIR -8 254 100 180 367 0 17 chr5 42011802 42011862 -157618288 - MIR SINE MIR -184 78 20 2273 86 30 3 chr5 42012131 42012433 -157617717 + AluSq SINE Alu 2 311 -2 388 372 60 30 chr5 42012663 42012932 -157617218 + L2 LINE L2 2543 2819 -495 1132 176 144 14 chr5 42012932 42013278 -157616872 - MER3 DNA MER1_type 0 2624 2234 484 209 9 17 chr5 42013281 42013396 -157616754 - MER3 DNA MER1_type -53 156 43 765 221 30 109 chr5 42013417 42013684 -157616466 - MIR SINE MIR -3 259 14 2695 208 99 86 chr5 42015478 42016090 -157614060 + L1ME1 LINE L1 35 638 -5758 3453 34 0 0 chr5 42016090 42016500 -157613650 - L1PA4 LINE L1 -3 6152 5743 2695 208 99 86 chr5 42016500 42017103 -157613047 + L1ME1 LINE L1 638 1265 -5131 710 294 40 73 chr5 42017112 42017656 -157612494 + MLT1E LTR MaLR 2 527 -66 1213 127 7 76 chr5 42017728 42018003 -157612147 + AluSx SINE Alu 55 310 -2 357 203 0 0 chr5 42018005 42018079 -157612071 + MLT1E LTR MaLR 492 565 -2 3060 240 55 20 chr5 42018080 42019933 -157610217 + L1ME1 LINE L1 1287 3170 -3045 550 196 83 0 chr5 42019938 42020071 -157610079 + L1ME1 LINE L1 4746 4889 -1326 2118 231 24 44 chr5 42020076 42020675 -157609475 + L1ME1 LINE L1 5577 6163 -72 198 0 0 0 chr5 42020675 42020697 -157609453 + (CA)n Simple_repeat Simple_repeat 2 23 0 2118 231 24 44 chr5 42020697 42020760 -157609390 + L1ME1 LINE L1 6163 6226 -9 216 0 0 0 chr5 42021682 42021706 -157608444 + (T)n Simple_repeat Simple_repeat 1 24 0 429 259 160 0 chr5 42022096 42022227 -157607923 - MIR SINE MIR -102 160 9 25 0 0 0 chr5 42022402 42022427 -157607723 + AT_rich Low_complexity Low_complexity 1 25 0 369 289 113 6 chr5 42024171 42024330 -157605820 + MIR SINE MIR 72 247 -15 503 285 67 6 chr5 42024362 42024527 -157605623 + MER45A DNA AcHobo 1 175 -3 332 198 93 0 chr5 42024915 42025001 -157605149 - MER69 DNA AcHobo 0 2526 2433 297 0 0 0 chr5 42025215 42025248 -157604902 + (TA)n Simple_repeat Simple_repeat 2 34 0 2314 101 7 3 chr5 42025248 42025556 -157604594 - AluSq SINE Alu -4 309 1 304 204 29 7 chr5 42025663 42025800 -157604350 + (TA)n Simple_repeat Simple_repeat 1 140 0 327 273 140 20 chr5 42025914 42026064 -157604086 - MIR3 SINE MIR -28 180 13 27 29 0 0 chr5 42026501 42026535 -157603615 + AT_rich Low_complexity Low_complexity 1 34 0 391 225 82 110 chr5 42026755 42026800 -157603350 + MER5B DNA MER1_type 2 47 -131 1920 156 0 0 chr5 42026800 42027095 -157603055 - AluSx SINE Alu -17 295 1 391 225 82 110 chr5 42027095 42027231 -157602919 + MER5B DNA MER1_type 47 178 0 924 194 9 65 chr5 42027492 42027724 -157602426 - MER20 DNA MER1_type 0 219 1 205 259 71 12 chr5 42029703 42029788 -157600362 + MIR3 SINE MIR 109 198 -10 271 58 0 39 chr5 42029916 42029968 -157600182 + (GA)n Simple_repeat Simple_repeat 2 51 0 305 273 110 39 chr5 42030687 42030841 -157599309 + MIR SINE MIR 28 192 -70 1586 155 121 67 chr5 42030923 42031329 -157598821 + MSTA LTR MaLR 1 428 0 1672 123 55 22 chr5 42031400 42031929 -157598221 - MER4A LTR ERV1 0 664 1 826 217 28 46 chr5 42031939 42032156 -157597994 - MIR SINE MIR -40 222 10 2789 126 52 67 chr5 42032235 42032731 -157597419 + MER4B LTR ERV1 63 552 -58 2231 110 20 0 chr5 42032731 42033030 -157597120 - AluSx SINE Alu -7 305 1 2789 126 52 67 chr5 42033030 42033089 -157597061 + MER4B LTR ERV1 552 610 0 231 284 104 49 chr5 42033383 42033566 -157596584 - L2 LINE L2 -1 3312 3120 290 198 306 0 chr5 42033935 42034046 -157596104 + MER103 DNA DNA 19 163 -3 1944 166 80 19 chr5 42034083 42034548 -157595602 - MER50 LTR ERV1 0 734 242 312 260 110 30 chr5 42034637 42034737 -157595413 - MER50 LTR ERV1 -617 117 10 198 381 63 51 chr5 42034776 42035091 -157595059 - L2 LINE L2 -44 3228 2910 619 325 148 37 chr5 42035199 42035841 -157594309 - L2 LINE L2 -534 2780 2068 1855 169 5 63 chr5 42036054 42036451 -157593699 - MLT1A2 LTR MaLR 0 374 1 417 349 39 37 chr5 42036659 42037014 -157593136 - L2 LINE L2 -1108 2206 1851 3171 109 42 35 chr5 42037056 42037658 -157592492 - MER4B LTR ERV1 0 779 1 228 254 8 134 chr5 42037877 42038011 -157592139 + L2 LINE L2 2164 2280 -1034 183 293 53 0 chr5 42038469 42038544 -157591606 + MIR SINE MIR 128 206 -56 264 235 0 0 chr5 42038556 42038607 -157591543 - L2 LINE L2 -9 3304 3254 1876 125 4 0 chr5 42038947 42039211 -157590939 + AluSx SINE Alu 38 302 -10 659 136 58 45 chr5 42039372 42039526 -157590624 - MER106B DNA MER1_type 0 1059 904 917 144 69 0 chr5 42039717 42039890 -157590260 - MER20 DNA MER1_type 0 219 35 873 188 43 27 chr5 42040854 42041040 -157589110 + MER5A DNA MER1_type 1 189 0 578 319 27 21 chr5 42041048 42041236 -157588914 - MER5A DNA MER1_type 0 189 1 2473 42 0 13 chr5 42041387 42041695 -157588455 + AluY SINE Alu 1 304 -7 443 340 34 14 chr5 42042458 42042605 -157587545 + MER91A DNA MER1_type 4 153 -43 1808 168 7 67 chr5 42042781 42043198 -157586952 - L1MC2 LINE L1 -10 6334 5943 1891 163 6 11 chr5 42043444 42043793 -157586357 - MLT1A1 LTR MaLR -8 357 11 910 213 40 5 chr5 42043874 42044076 -157586074 + MER3 DNA MER1_type 1 209 0 208 0 62 0 chr5 42044180 42044212 -157585938 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2232 92 0 0 chr5 42044216 42044500 -157585650 - AluSg SINE Alu -26 284 1 22 99 0 0 chr5 42044648 42044719 -157585431 + AT_rich Low_complexity Low_complexity 1 71 0 2253 113 3 0 chr5 42044747 42045047 -157585103 - AluSx SINE Alu -11 301 1 185 374 28 50 chr5 42045371 42045553 -157584597 + MIR3 SINE MIR 7 184 -24 384 316 32 16 chr5 42046369 42046556 -157583594 + L2 LINE L2 3119 3308 -5 639 235 145 30 chr5 42046578 42046778 -157583372 + MIR SINE MIR 33 255 -7 214 353 60 27 chr5 42047324 42047474 -157582676 + MIR SINE MIR 47 201 -61 297 0 0 0 chr5 42047671 42047704 -157582446 + (CA)n Simple_repeat Simple_repeat 2 34 0 1599 88 0 44 chr5 42048199 42048427 -157581723 + AluY SINE Alu 84 301 -10 314 211 16 74 chr5 42049091 42049256 -157580894 + MIR SINE MIR 3 147 -69 181 302 16 16 chr5 42049499 42049562 -157580588 + L2 LINE L2 3242 3304 -9 185 323 131 20 chr5 42049645 42049744 -157580406 + MIR SINE MIR 24 133 -75 248 298 62 133 chr5 42049811 42050354 -157579796 + L2 LINE L2 2742 3270 -2 193 214 125 0 chr5 42050405 42050461 -157579689 + MIR SINE MIR 200 262 0 240 184 0 0 chr5 42051247 42051296 -157578854 + Alu SINE Alu 255 303 0 23 33 0 0 chr5 42051612 42051642 -157578508 + AT_rich Low_complexity Low_complexity 1 30 0 3652 190 21 59 chr5 42052430 42053333 -157576817 - L1MA9 LINE L1 -40 6272 5425 2093 126 47 47 chr5 42053333 42053697 -157576453 - THE1B LTR MaLR 0 364 1 3652 190 21 59 chr5 42053697 42054013 -157576137 - L1MA9 LINE L1 -887 5425 5099 304 338 55 28 chr5 42054286 42054431 -157575719 - L2 LINE L2 -12 3260 3112 31 26 0 0 chr5 42054865 42054903 -157575247 + AT_rich Low_complexity Low_complexity 1 38 0 895 134 98 12 chr5 42055209 42055373 -157574777 + FRAM SINE Alu 1 176 0 714 294 46 25 chr5 42055609 42055935 -157574215 + MLT1I LTR MaLR 59 391 -18 346 330 109 40 chr5 42055954 42056275 -157573875 - L2 LINE L2 -363 2951 2609 733 267 88 5 chr5 42056275 42056492 -157573658 - MIR SINE MIR -2 260 26 214 314 117 55 chr5 42056615 42057051 -157573099 - L2 LINE L2 -823 2491 2029 387 281 46 7 chr5 42057796 42057949 -157572201 + MER103 DNA DNA 2 160 -6 428 274 74 15 chr5 42058090 42058384 -157571766 + MLT1I LTR MaLR 70 408 -1 2026 115 7 39 chr5 42058566 42058871 -157571279 + AluSx SINE Alu 1 295 -17 2346 107 3 0 chr5 42058917 42059227 -157570923 + AluSp SINE Alu 1 311 -2 423 296 59 30 chr5 42059249 42059384 -157570766 - MER5A DNA MER1_type -49 140 2 348 216 68 0 chr5 42059695 42059783 -157570367 - MLT1K LTR MaLR -10 578 485 398 211 0 0 chr5 42060922 42060998 -157569152 + MER20 DNA MER1_type 139 214 -5 720 314 21 8 chr5 42061009 42061245 -157568905 - L2 LINE L2 -514 2800 2562 319 303 74 8 chr5 42061268 42061390 -157568760 - MIR SINE MIR -113 149 20 1528 240 128 6 chr5 42062020 42062504 -157567646 - L1ME3A LINE L1 -14 6156 5614 184 336 103 41 chr5 42062727 42062873 -157567277 + MIR3 SINE MIR 2 156 -52 * 512 324 200 16 chr5 42062870 42063240 -157566910 - L2 LINE L2 0 3272 2835 2067 131 16 7 chr5 42063280 42063586 -157566564 - AluSx SINE Alu -3 309 1 661 270 12 85 chr5 42063928 42064176 -157565974 - MIR SINE MIR 0 262 33 288 354 9 9 chr5 42064523 42064636 -157565514 - L2 LINE L2 -666 2648 2536 258 366 6 11 chr5 42064702 42064877 -157565273 + MER117 DNA MER1_type 6 179 -18 2577 139 26 12 chr5 42064907 42065325 -157564825 + MSTA LTR MaLR 5 428 0 344 214 43 43 chr5 42065576 42065693 -157564457 - MER103 DNA DNA -45 121 5 1939 113 92 11 chr5 42065871 42066153 -157563997 - AluSq SINE Alu -8 305 1 216 286 14 43 chr5 42066408 42066478 -157563672 + L2 LINE L2 3205 3272 0 591 296 62 4 chr5 42067152 42067395 -157562755 - MIR SINE MIR -4 258 2 1831 130 10 17 chr5 42067746 42068083 -157562067 - MER1B DNA MER1_type 0 339 34 970 239 127 7 chr5 42068374 42068658 -157561492 + LTR16A LTR ERVL 129 446 -4 806 265 168 19 chr5 42068882 42069351 -157560799 + L2 LINE L2 2742 3277 -36 205 295 46 81 chr5 42069353 42069526 -157560624 - L2 LINE L2 -901 2413 2247 2064 112 11 0 chr5 42069596 42069874 -157560276 + AluSx SINE Alu 1 281 -31 477 0 0 0 chr5 42069877 42069930 -157560220 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 479 223 64 38 chr5 42070050 42070207 -157559943 - MLT1K LTR MaLR -65 523 363 766 267 6 0 chr5 42070418 42070598 -157559552 - MER63A DNA MER1_type -28 182 2 314 321 53 15 chr5 42070599 42070730 -157559420 - MLT1K LTR MaLR -430 158 23 22 0 0 0 chr5 42071316 42071338 -157558812 + AT_rich Low_complexity Low_complexity 1 22 0 284 268 227 0 chr5 42071420 42071517 -157558633 + L2 LINE L2 3186 3304 -9 2205 91 17 3 chr5 42071543 42071840 -157558310 + AluSp SINE Alu 1 301 -12 2003 119 7 4 chr5 42072367 42072644 -157557506 + AluSx SINE Alu 15 292 -20 445 70 14 14 chr5 42072648 42072719 -157557431 + (TG)n Simple_repeat Simple_repeat 2 72 0 1822 134 65 0 chr5 42072910 42073186 -157556964 + AluJo SINE Alu 1 294 -18 602 265 146 18 chr5 42073574 42073793 -157556357 + MIR SINE MIR 6 252 -10 220 302 0 0 chr5 42073905 42073958 -157556192 + MIR SINE MIR 99 151 -111 220 98 146 0 chr5 42075712 42075753 -157554397 - L2 LINE L2 -3 3310 3264 403 219 0 10 chr5 42075877 42075973 -157554177 - MIR SINE MIR -49 213 119 2145 100 0 7 chr5 42076478 42076803 -157553347 + AluSg1 SINE Alu 1 323 0 359 348 78 5 chr5 42077311 42077515 -157552635 - L3 LINE CR1 -821 756 538 453 213 41 49 chr5 42078224 42078346 -157551804 + Charlie8 DNA MER1_type 12 132 -2285 279 267 30 69 chr5 42078883 42078984 -157551166 - MIR SINE MIR -76 132 36 647 233 123 36 chr5 42079002 42079221 -157550929 + MIR SINE MIR 1 238 -24 2262 52 42 3 chr5 42079825 42080112 -157550038 + AluY SINE Alu 1 298 -13 250 329 51 29 chr5 42080701 42080838 -157549312 - L2 LINE L2 -1035 2279 2140 385 311 126 30 chr5 42080888 42081380 -157548770 + L1 LINE L1 4882 5425 -751 721 251 5 10 chr5 42082310 42082505 -157547645 - MER119 DNA MER1_type -3 580 387 1018 228 65 19 chr5 42082506 42082830 -157547320 + MER2 DNA MER2_type 2 340 -5 1202 243 74 38 chr5 42082841 42083207 -157546943 - MER119 DNA MER1_type -200 383 5 204 273 99 41 chr5 42083308 42083429 -157546721 - L2 LINE L2 0 3272 3145 994 243 23 5 chr5 42083462 42083680 -157546470 - MER58A DNA MER1_type 0 224 3 455 240 142 27 chr5 42083972 42084197 -157545953 - HAL1 LINE L1 -760 1747 1497 290 238 119 20 chr5 42084358 42084509 -157545641 - HAL1 LINE L1 -1004 1503 1338 321 305 23 29 chr5 42085845 42086019 -157544131 + Charlie8 DNA MER1_type 10 182 -2235 305 361 23 23 chr5 42086704 42086834 -157543316 - MIR3 SINE MIR -76 132 3 719 263 66 99 chr5 42087293 42087870 -157542280 - HAL1 LINE L1 -1244 1263 706 574 207 36 57 chr5 42088833 42089026 -157541124 - L1ME1 LINE L1 -68 6098 5910 318 67 0 0 chr5 42090184 42090229 -157539921 + (TG)n Simple_repeat Simple_repeat 2 46 0 237 272 56 56 chr5 42090374 42090499 -157539651 - MLT1I LTR MaLR -8 401 277 358 259 30 15 chr5 42090605 42090736 -157539414 - MLT1I LTR MaLR -276 133 1 21 57 0 0 chr5 42091720 42091755 -157538395 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr5 42092636 42092663 -157537487 + (CA)n Simple_repeat Simple_repeat 2 28 0 315 397 35 5 chr5 42094585 42094784 -157535366 + L2 LINE L2 2558 2762 -552 31 0 0 0 chr5 42096213 42096244 -157533906 + AT_rich Low_complexity Low_complexity 1 31 0 6796 60 49 12 chr5 42096244 42097150 -157533000 - L1PA7 LINE L1 -7 6147 5234 25 0 0 0 chr5 42097522 42097547 -157532603 + AT_rich Low_complexity Low_complexity 1 25 0 412 212 0 10 chr5 42097690 42097789 -157532361 - HAL1 LINE L1 -107 2400 2303 302 286 0 0 chr5 42097794 42097864 -157532286 + C-rich Low_complexity Low_complexity 3 72 0 263 342 35 0 chr5 42098016 42098130 -157532020 - HAL1 LINE L1 -505 2002 1885 1432 204 99 3 chr5 42098478 42098792 -157531358 + MER2 DNA MER2_type 1 344 0 289 256 12 0 chr5 42098880 42098966 -157531184 + L1ME LINE L1 5470 5556 -608 2211 277 103 25 chr5 42098994 42100393 -157529757 - HAL1 LINE L1 -859 1648 1 999 133 100 120 chr5 42100661 42100788 -157529362 + MER46A DNA MER2_type 1 122 -2609 1651 154 0 74 chr5 42100788 42101112 -157529038 - AluJb SINE Alu -3 309 10 999 133 100 120 chr5 42101112 42101225 -157528925 + MER46A DNA MER2_type 122 236 0 332 278 146 35 chr5 42101763 42101907 -157528243 + MER5A DNA MER1_type 30 189 0 2431 68 0 26 chr5 42104571 42104882 -157525268 + AluY SINE Alu 1 303 -8 555 243 65 8 chr5 42104946 42105214 -157524936 - L1M4 LINE L1 -1529 4617 4320 2198 120 0 0 chr5 42105872 42106171 -157523979 - AluSx SINE Alu -11 301 3 26 30 0 0 chr5 42106199 42106232 -157523918 + AT_rich Low_complexity Low_complexity 1 33 0 244 316 79 0 chr5 42107141 42107280 -157522870 + L1ME4a LINE L1 5967 6116 -5 32 86 0 0 chr5 42107661 42107742 -157522408 + AT_rich Low_complexity Low_complexity 1 81 0 1312 217 128 41 chr5 42107802 42108009 -157522141 - L1MD2 LINE L1 -2 6357 6169 396 0 0 0 chr5 42108009 42108053 -157522097 + (TG)n Simple_repeat Simple_repeat 2 45 0 1312 217 128 41 chr5 42108053 42108380 -157521770 - L1MD2 LINE L1 -190 6169 5782 204 125 0 0 chr5 42109007 42109039 -157521111 + (T)n Simple_repeat Simple_repeat 1 32 0 301 235 62 12 chr5 42109666 42109747 -157520403 + L2 LINE L2 3188 3272 0 281 172 16 0 chr5 42110577 42110641 -157519509 + (TA)n Simple_repeat Simple_repeat 1 65 0 2334 96 3 7 chr5 42110896 42111198 -157518952 + AluSp SINE Alu 1 301 -12 246 291 87 12 chr5 42111219 42111391 -157518759 + L1ME4a LINE L1 5756 5940 -181 2156 88 39 0 chr5 42111700 42111983 -157518167 - AluSg SINE Alu -16 294 1 2165 211 147 4 chr5 42112231 42112700 -157517450 - MLT1F LTR MaLR -2 540 5 901 255 41 122 chr5 42112781 42112815 -157517335 - L2 LINE L2 -4 3309 3274 2039 113 103 6 chr5 42112815 42113144 -157517006 + MER46B DNA MER2_type 1 236 0 901 255 41 122 chr5 42113144 42113650 -157516500 - L2 LINE L2 -39 3274 2813 412 316 159 29 chr5 42114905 42115326 -157514824 - L2 LINE L2 -960 2354 1879 337 294 95 24 chr5 42115370 42115581 -157514569 + L1ME4a LINE L1 5524 5749 -372 433 196 128 14 chr5 42115747 42115895 -157514255 + L1ME4a LINE L1 5957 6121 0 1608 131 71 22 chr5 42116152 42116420 -157513730 - AluSg SINE Alu -10 300 20 2127 121 14 0 chr5 42116466 42116756 -157513394 - AluSx SINE Alu -18 294 1 743 209 134 42 chr5 42119930 42120237 -157509913 + L1ME4a LINE L1 5521 5855 -266 363 298 0 0 chr5 42121217 42121301 -157508849 - MIR SINE MIR -131 131 48 299 250 118 0 chr5 42121311 42121387 -157508763 + L2 LINE L2 3201 3285 -28 23 54 0 0 chr5 42121507 42121544 -157508606 + AT_rich Low_complexity Low_complexity 1 37 0 2042 97 8 0 chr5 42122587 42122854 -157507296 + AluSg SINE Alu 31 299 -11 21 36 0 0 chr5 42123017 42123045 -157507105 + AT_rich Low_complexity Low_complexity 1 28 0 2122 135 0 6 chr5 42123433 42123744 -157506406 - AluJb SINE Alu -3 309 1 888 155 7 14 chr5 42125713 42125861 -157504289 + MER44D DNA MER2_type 13 429 -180 1565 270 173 32 chr5 42125896 42126922 -157503228 + HAL1 LINE L1 1338 2507 0 254 280 160 45 chr5 42127158 42127358 -157502792 - MIR SINE MIR -15 247 25 983 219 32 36 chr5 42128166 42128385 -157501765 + MER20 DNA MER1_type 1 218 -1 181 276 149 86 chr5 42129055 42129472 -157500678 - L2 LINE L2 -2 3270 2828 2130 118 0 29 chr5 42129726 42130039 -157500111 + AluSc SINE Alu 1 304 -5 31 76 0 0 chr5 42130720 42130786 -157499364 + AT_rich Low_complexity Low_complexity 1 66 0 24 0 0 0 chr5 42131005 42131029 -157499121 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 42132381 42132403 -157497747 + AT_rich Low_complexity Low_complexity 1 22 0 42 0 0 0 chr5 42134825 42134867 -157495283 + AT_rich Low_complexity Low_complexity 1 42 0 22 56 0 0 chr5 42137849 42137885 -157492265 + AT_rich Low_complexity Low_complexity 1 36 0 2251 100 16 3 chr5 42139556 42139865 -157490285 + AluSq SINE Alu 1 313 0 262 293 88 14 chr5 42140318 42140465 -157489685 + MIR SINE MIR 46 203 -59 190 340 0 0 chr5 42140854 42140907 -157489243 + L2 LINE L2 3213 3265 -7 306 309 82 67 chr5 42141776 42141855 -157488295 - L1ME4a LINE L1 -6 6115 6039 2161 104 0 7 chr5 42141855 42142153 -157487997 - AluSg SINE Alu -14 296 1 306 309 82 67 chr5 42142153 42142429 -157487721 - L1ME4a LINE L1 -82 6039 5755 366 198 94 0 chr5 42143104 42143210 -157486940 + MLT1E1 LTR MaLR 168 283 -371 380 279 136 77 chr5 42146821 42147327 -157482823 + MLT1H LTR MaLR 1 536 -13 222 91 0 0 chr5 42147878 42147911 -157482239 + (ATG)n Simple_repeat Simple_repeat 2 34 0 183 231 135 0 chr5 42148014 42148066 -157482084 + L2 LINE L2 3252 3310 -3 457 283 37 133 chr5 42150607 42150982 -157479168 - L2 LINE L2 0 3272 2934 2304 35 7 14 chr5 42151263 42151571 -157478579 - AluY SINE Alu 0 306 1 21 0 0 0 chr5 42151926 42151947 -157478203 + AT_rich Low_complexity Low_complexity 1 21 0 285 212 70 11 chr5 42151979 42152071 -157478079 + HsTC2 DNA Tc2 4 1898 0 325 289 30 60 chr5 42152072 42152238 -157477912 + L2 LINE L2 3135 3295 -18 285 329 73 22 chr5 42152243 42152380 -157477770 + MIR SINE MIR 112 255 -7 186 266 139 38 chr5 42153030 42153109 -157477041 + MIR SINE MIR 46 132 -76 1539 156 133 15 chr5 42154149 42154419 -157475731 + AluJb SINE Alu 1 302 0 1899 146 28 0 chr5 42154468 42154755 -157475395 - AluJb SINE Alu -17 295 1 1567 189 25 28 chr5 42155333 42155650 -157474500 - L1MB2 LINE L1 -2 6169 5854 1802 194 60 28 chr5 42155770 42156202 -157473948 + MLT1C LTR MaLR 22 467 0 224 267 107 13 chr5 42156233 42156308 -157473842 - MIR SINE MIR -69 139 58 223 330 58 0 chr5 42156489 42156592 -157473558 - L2 LINE L2 -5 3308 3200 383 225 170 37 chr5 42157088 42157305 -157472845 + MIR SINE MIR 3 248 -14 534 222 129 6 chr5 42157884 42158055 -157472095 + L1ME3 LINE L1 5970 6161 -1 221 81 0 27 chr5 42158444 42158481 -157471669 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 207 151 0 38 chr5 42158831 42158884 -157471266 + (TAA)n Simple_repeat Simple_repeat 1 51 0 202 220 0 20 chr5 42158992 42159042 -157471108 - MIR SINE MIR -48 214 166 956 187 6 11 chr5 42160243 42160425 -157469725 - MER5A DNA MER1_type -8 181 1 184 326 0 0 chr5 42160779 42160828 -157469322 - MIR SINE MIR -167 95 47 691 249 19 89 chr5 42161009 42161122 -157469028 - MER58A DNA MER1_type -2222 198 79 2120 108 17 3 chr5 42161122 42161417 -157468733 + AluSx SINE Alu 1 299 -13 691 249 19 89 chr5 42161417 42161442 -157468708 - MER58A DNA MER1_type -2341 79 54 2319 102 0 3 chr5 42161442 42161745 -157468405 - AluSx SINE Alu -10 302 1 691 249 19 89 chr5 42161745 42161818 -157468332 - MER58A DNA MER1_type -2366 54 1 721 251 141 73 chr5 42163228 42163695 -157466455 + MLT1L LTR MaLR 113 611 -4 324 158 0 0 chr5 42163751 42163808 -157466342 + (CA)n Simple_repeat Simple_repeat 1 57 0 2346 106 0 3 chr5 42165678 42165981 -157464169 - AluSq SINE Alu -11 302 1 248 291 55 55 chr5 42166052 42166179 -157463971 - MIR SINE MIR -63 145 19 236 268 0 0 chr5 42166689 42166745 -157463405 + A-rich Low_complexity Low_complexity 5 60 0 2241 97 0 0 chr5 42168503 42168791 -157461359 - AluSx SINE Alu -24 288 1 1942 118 39 15 chr5 42168855 42169187 -157460963 - L1MA5A LINE L1 -7 6290 5951 2280 110 0 3 chr5 42169383 42169683 -157460467 + AluSx SINE Alu 1 299 -13 286 367 24 9 chr5 42169715 42169925 -157460225 - L3 LINE CR1 -7 1570 1358 1323 161 20 91 chr5 42170106 42170174 -157459976 - MER41D LTR ERV1 -280 277 206 2297 105 0 0 chr5 42170174 42170469 -157459681 - AluSx SINE Alu -17 295 1 1323 161 20 91 chr5 42170469 42170698 -157459452 - MER41D LTR ERV1 -351 206 1 225 229 21 0 chr5 42170698 42170743 -157459407 - MLT1E1 LTR MaLR -608 46 1 286 214 28 45 chr5 42170992 42171170 -157458980 + (TATAA)n Simple_repeat Simple_repeat 3 177 0 25 0 0 0 chr5 42171181 42171206 -157458944 + AT_rich Low_complexity Low_complexity 1 25 0 321 209 81 23 chr5 42171714 42171800 -157458350 - MER103 DNA DNA -73 93 3 351 96 0 0 chr5 42171815 42171867 -157458283 + (TG)n Simple_repeat Simple_repeat 2 53 0 475 232 0 85 chr5 42174316 42174480 -157455670 - MIR SINE MIR 0 262 113 2426 81 7 0 chr5 42175320 42175618 -157454532 - AluSx SINE Alu -12 300 1 604 239 17 28 chr5 42175773 42175949 -157454201 + MER5B DNA MER1_type 5 178 0 2489 88 0 0 chr5 42177344 42177651 -157452499 + AluSg SINE Alu 1 307 -3 258 330 26 0 chr5 42178487 42178602 -157451548 + MIR SINE MIR 68 185 -77 536 198 0 45 chr5 42178681 42178792 -157451358 + MLT1I LTR MaLR 104 209 -200 376 257 37 44 chr5 42178964 42179100 -157451050 - L2 LINE L2 -2 3270 3136 197 180 20 0 chr5 42180933 42180983 -157449167 + CT-rich Low_complexity Low_complexity 1 51 0 640 245 25 80 chr5 42181558 42181795 -157448355 - MIR SINE MIR -16 246 23 502 191 223 37 chr5 42181905 42182093 -157448057 - MIR SINE MIR -38 224 2 2734 154 14 86 chr5 42182295 42182855 -157447295 + MLT2B1 LTR ERVL 1 520 0 872 124 71 41 chr5 42183368 42183537 -157446613 - Tigger3b DNA MER2_type -107 1124 951 1098 134 11 23 chr5 42183547 42183752 -157446398 + L1MA4A LINE L1 1 544 -6665 3273 247 19 1 chr5 42183883 42184558 -157445592 + L1MA4A LINE L1 1063 1749 -5460 * 6045 169 36 40 chr5 42184552 42186816 -157443334 + L1MA4A LINE L1 5155 7354 -11 5857 114 47 9 chr5 42186816 42187748 -157442402 - Tigger3b DNA MER2_type -263 968 1 600 184 217 0 chr5 42187754 42187906 -157442244 - MIR SINE MIR -66 196 12 35 24 0 0 chr5 42187907 42187949 -157442201 + AT_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr5 42188013 42188033 -157442117 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 819 191 29 71 chr5 42188035 42188245 -157441905 - AluJo SINE Alu -20 292 92 2246 121 0 0 chr5 42188277 42188583 -157441567 - AluY SINE Alu -5 306 1 22 0 0 0 chr5 42188704 42188726 -157441424 + AT_rich Low_complexity Low_complexity 1 22 0 921 251 34 8 chr5 42189978 42190213 -157439937 + MER69 DNA AcHobo 4 244 -2282 1665 144 107 26 chr5 42190220 42190566 -157439584 + THE1C LTR MaLR 2 375 0 404 125 14 28 chr5 42190568 42190640 -157439510 + MER69 DNA AcHobo 2454 2524 -2 217 156 44 0 chr5 42190651 42190696 -157439454 + MIR SINE MIR 151 197 -65 1037 146 50 85 chr5 42190849 42191109 -157439041 + ORSL DNA AcHobo 1 251 -24 27 0 0 0 chr5 42192339 42192366 -157437784 + GC_rich Low_complexity Low_complexity 1 27 0 237 119 15 30 chr5 42192369 42192436 -157437714 + (CGGGGG)n Simple_repeat Simple_repeat 5 70 0 21 0 0 0 chr5 42192466 42192487 -157437663 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 42192548 42192571 -157437579 + GC_rich Low_complexity Low_complexity 1 23 0 21 104 0 0 chr5 42192809 42192886 -157437264 + GC_rich Low_complexity Low_complexity 1 77 0 412 170 71 18 chr5 42194574 42194686 -157435464 - L1MC4a LINE L1 -1974 5834 5717 404 37 19 0 chr5 42195443 42195497 -157434653 + (TA)n Simple_repeat Simple_repeat 1 55 0 848 276 75 44 chr5 42195600 42196052 -157434098 - L2 LINE L2 -12 3301 2836 247 350 57 0 chr5 42196131 42196254 -157433896 + L2 LINE L2 3184 3313 0 241 230 115 23 chr5 42198208 42198295 -157431855 - MIR3 SINE MIR -23 185 91 421 254 66 8 chr5 42198360 42198482 -157431668 + L2 LINE L2 3183 3311 -2 460 307 6 17 chr5 42198908 42199087 -157431063 + L1ME4a LINE L1 5501 5677 -444 2235 98 3 0 chr5 42199313 42199609 -157430541 - AluY SINE Alu -14 297 1 489 277 82 24 chr5 42199616 42199831 -157430319 + L1ME4a LINE L1 5710 5952 -169 324 0 0 0 chr5 42199831 42199867 -157430283 + (TG)n Simple_repeat Simple_repeat 2 37 0 489 277 82 24 chr5 42199867 42199979 -157430171 + L1ME4a LINE L1 5952 6056 -65 314 167 188 52 chr5 42200019 42200115 -157430035 + MIR SINE MIR 46 154 -108 1946 135 51 15 chr5 42201088 42201422 -157428728 + MER7A DNA MER2_type 2 345 -1 267 242 0 0 chr5 42202308 42202370 -157427780 - Charlie8 DNA MER1_type -991 1426 1365 576 270 105 84 chr5 42202374 42202756 -157427394 - Charlie8 DNA MER1_type -2017 400 11 303 270 72 13 chr5 42202800 42202952 -157427198 - L1ME4a LINE L1 -188 5933 5773 2534 74 0 0 chr5 42203227 42203538 -157426612 - AluY SINE Alu 0 311 1 362 286 40 31 chr5 42203578 42203739 -157426411 - L1ME4a LINE L1 -11 6110 5945 240 35 0 0 chr5 42203739 42203768 -157426382 + (CA)n Simple_repeat Simple_repeat 2 30 0 362 286 40 31 chr5 42203768 42203833 -157426317 - L1ME4a LINE L1 -176 5945 5882 367 61 0 0 chr5 42203835 42203884 -157426266 - Alu SINE Alu -6 294 246 182 36 0 36 chr5 42204259 42204287 -157425863 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2090 118 0 20 chr5 42204289 42204586 -157425564 - AluSq SINE Alu -20 293 3 318 232 99 49 chr5 42204820 42204962 -157425188 + L1ME4a LINE L1 5956 6104 -17 23 33 0 0 chr5 42204962 42204992 -157425158 + AT_rich Low_complexity Low_complexity 1 30 0 2092 132 7 0 chr5 42205655 42205950 -157424200 + AluSx SINE Alu 3 299 -13 1980 124 14 0 chr5 42206788 42207063 -157423087 + AluSx SINE Alu 1 279 -33 1783 107 0 50 chr5 42207063 42207343 -157422807 + LTR17 LTR ERV1 1 266 -514 1805 136 55 27 chr5 42309367 42309697 -157320453 - MER44D DNA MER2_type 0 609 1 181 311 167 15 chr5 42309830 42309962 -157320188 - L3 LINE CR1 -861 716 565 23 0 0 0 chr5 42310354 42310377 -157319773 + AT_rich Low_complexity Low_complexity 1 23 0 186 235 0 39 chr5 42312062 42312113 -157318037 - L3 LINE CR1 -5 1572 1524 210 200 67 0 chr5 42312713 42312758 -157317392 + L2 LINE L2 3224 3271 -1 201 176 0 0 chr5 42312856 42312890 -157317260 + T-rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 42314716 42314737 -157315413 + AT_rich Low_complexity Low_complexity 1 21 0 2113 112 0 3 chr5 42314762 42315057 -157315093 - AluSx SINE Alu -18 294 1 330 275 63 41 chr5 42317499 42317647 -157312503 + MIR3 SINE MIR 37 187 -21 437 304 69 20 chr5 42320716 42320825 -157309325 - MIR SINE MIR -36 226 124 2047 90 0 22 chr5 42320825 42321103 -157309047 - AluSg SINE Alu -4 306 35 437 304 69 20 chr5 42321103 42321197 -157308953 - MIR SINE MIR -138 124 13 207 281 18 18 chr5 42321289 42321346 -157308804 + L2 LINE L2 3124 3180 -92 1323 232 169 23 chr5 42321793 42322409 -157307741 + LTR50 LTR ERVL 1 706 -89 406 156 130 0 chr5 42322417 42322494 -157307656 + 5S rRNA rRNA 2 88 -33 2244 77 20 17 chr5 42325123 42325421 -157304729 - AluSq SINE Alu -14 299 1 349 329 186 0 chr5 42326361 42326571 -157303579 + MIR SINE MIR 6 254 -8 1985 104 36 93 chr5 42326572 42326621 -157303529 - THE1B LTR MaLR 0 364 314 342 0 0 0 chr5 42326621 42326659 -157303491 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 831 176 0 0 chr5 42326659 42326807 -157303343 - FRAM SINE Alu -18 148 1 1985 104 36 93 chr5 42326807 42327142 -157303008 - THE1B LTR MaLR -48 316 1 2334 112 0 0 chr5 42327304 42327607 -157302543 - AluSq SINE Alu -10 303 1 410 319 0 33 chr5 42327898 42328080 -157302070 + MIR SINE MIR 28 203 -59 190 317 0 17 chr5 42328222 42328282 -157301868 + MIR SINE MIR 28 86 -176 2184 114 7 0 chr5 42328449 42328748 -157301402 - AluSq SINE Alu -12 301 1 448 275 25 17 chr5 42328997 42329117 -157301033 + MER5B DNA MER1_type 37 157 -21 255 321 23 23 chr5 42329192 42329323 -157300827 - MIR3 SINE MIR -24 184 54 2168 33 7 0 chr5 42329921 42330194 -157299956 - L1PA4 LINE L1 -263 5892 5618 2002 45 0 0 chr5 42330194 42330438 -157299712 + L1PA4 LINE L1 5911 6155 0 216 210 16 0 chr5 42330444 42330506 -157299644 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 2153 113 3 22 chr5 42330591 42330909 -157299241 - AluSx SINE Alu 0 312 1 1989 105 59 0 chr5 42333245 42333531 -157296619 - AluSg SINE Alu -7 303 1 414 288 102 19 chr5 42338433 42338638 -157291512 - L2 LINE L2 -1 3312 3091 231 169 65 65 chr5 42338767 42338844 -157291306 - MIR SINE MIR -111 151 75 408 301 68 30 chr5 42340890 42341023 -157289127 - L2 LINE L2 -20 3252 3115 1792 89 24 0 chr5 42343189 42343437 -157286713 + L1PA7 LINE L1 5901 6154 0 224 298 169 16 chr5 42345032 42345156 -157284994 - MIR SINE MIR -118 144 2 192 371 133 9 chr5 42345274 42345379 -157284771 - MIR SINE MIR -131 131 14 230 220 60 0 chr5 42345514 42345564 -157284586 + MIR SINE MIR 54 106 -156 395 217 322 0 chr5 42346158 42346273 -157283877 - MER5A DNA MER1_type -37 152 1 570 295 74 11 chr5 42347482 42347672 -157282478 - MIR SINE MIR -50 212 11 1764 142 0 47 chr5 42347901 42348225 -157281925 + AluSx SINE Alu 1 310 0 306 0 0 0 chr5 42350598 42350632 -157279518 + (CA)n Simple_repeat Simple_repeat 2 35 0 272 304 67 28 chr5 42354536 42354583 -157275567 + L1MC4a LINE L1 5636 5680 -2128 2069 89 48 20 chr5 42354583 42354875 -157275275 - AluSg1 SINE Alu -9 300 1 272 304 67 28 chr5 42354875 42355080 -157275070 + L1MC4a LINE L1 5680 5898 -1910 404 250 29 103 chr5 42355479 42355606 -157274544 - MER5A DNA MER1_type 0 189 81 2455 55 7 3 chr5 42355606 42355916 -157274234 - AluY SINE Alu 0 311 1 404 250 29 103 chr5 42355916 42355992 -157274158 - MER5A DNA MER1_type -108 81 1 1464 101 0 41 chr5 42356009 42356228 -157273922 + AluSc SINE Alu 97 306 -3 194 250 0 0 chr5 42356821 42356861 -157273289 - MIR SINE MIR -129 79 40 515 281 6 121 chr5 42356935 42357266 -157272884 + L3 LINE CR1 1036 1328 -249 396 186 133 0 chr5 42357273 42357386 -157272764 + MLT1C LTR MaLR 6 133 -334 412 332 133 15 chr5 42357485 42357681 -157272469 + MIR SINE MIR 23 241 -21 354 301 113 5 chr5 42357747 42357950 -157272200 + L1ME LINE L1 5594 5818 -344 724 240 143 10 chr5 42358273 42358469 -157271681 - MIR SINE MIR -38 224 3 1470 102 0 0 chr5 42358647 42358833 -157271317 - AluSg1 SINE Alu -123 186 1 214 164 36 0 chr5 42359134 42359189 -157270961 + (TG)n Simple_repeat Simple_repeat 2 58 0 223 240 0 20 chr5 42359846 42359896 -157270254 + CT-rich Low_complexity Low_complexity 1 49 0 237 65 0 0 chr5 42359903 42359934 -157270216 + (CA)n Simple_repeat Simple_repeat 1 31 0 456 268 51 19 chr5 42360004 42360161 -157269989 + MER63A DNA MER1_type 49 210 0 515 343 91 8 chr5 42360361 42360603 -157269547 + MIR SINE MIR 1 262 0 1393 274 44 27 chr5 42360809 42361315 -157268835 + L2 LINE L2 2555 3064 -249 1541 230 78 16 chr5 42361315 42361749 -157268401 + MLT1C LTR MaLR 7 467 0 195 215 139 25 chr5 42361756 42361835 -157268315 + L2 LINE L2 3061 3148 -165 384 239 151 71 chr5 42362322 42362562 -157267588 + L1MC5 LINE L1 7311 7530 -431 2148 119 3 0 chr5 42362562 42362855 -157267295 + AluSx SINE Alu 2 295 -17 384 239 151 71 chr5 42362855 42363192 -157266958 + L1MC5 LINE L1 7530 7934 -27 375 78 0 0 chr5 42363218 42363269 -157266881 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 685 174 0 0 chr5 42364177 42364286 -157265864 + AluJb SINE Alu 179 287 -25 318 239 22 43 chr5 42364287 42364379 -157265771 - L1MC4 LINE L1 -1339 6703 6614 2185 124 28 36 chr5 42364383 42364747 -157265403 + THE1B LTR MaLR 4 364 0 203 368 26 26 chr5 42364750 42364867 -157265283 - MIR SINE MIR -62 200 84 304 127 48 0 chr5 42365814 42365877 -157264273 + GA-rich Low_complexity Low_complexity 4 69 0 213 121 0 0 chr5 42367294 42367327 -157262823 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 22 80 0 0 chr5 42367334 42367384 -157262766 + AT_rich Low_complexity Low_complexity 1 50 0 1575 155 18 129 chr5 42367397 42367783 -157262367 + MER7A DNA MER2_type 1 341 -5 1756 132 7 43 chr5 42368028 42368331 -157261819 - AluSx SINE Alu -20 292 1 180 0 0 0 chr5 42368970 42368990 -157261160 + (TA)n Simple_repeat Simple_repeat 2 21 0 1849 155 0 20 chr5 42369058 42369355 -157260795 + AluJb SINE Alu 1 291 -21 321 135 0 0 chr5 42369356 42369408 -157260742 + (TA)n Simple_repeat Simple_repeat 1 52 0 247 233 47 0 chr5 42369413 42369499 -157260651 - L1MC4 LINE L1 -1339 6703 6614 238 255 0 43 chr5 42369423 42369517 -157260633 + L1MC4 LINE L1 6614 6703 -1339 * 226 274 55 0 chr5 42369499 42369572 -157260578 - L1MC4 LINE L1 -1349 6693 6617 * 366 183 0 0 chr5 42369575 42369646 -157260504 + (TA)n Simple_repeat Simple_repeat 2 72 0 322 297 41 41 chr5 42370342 42370487 -157259663 + HAL1 LINE L1 2307 2451 -56 325 316 39 124 chr5 42370787 42371142 -157259008 + L2 LINE L2 2948 3272 0 468 232 83 18 chr5 42371269 42371437 -157258713 + MER104 DNA MER2_type 2 180 0 1239 106 252 0 chr5 42372426 42372682 -157257468 - AluSx SINE Alu 0 313 1 1706 215 65 70 chr5 42373007 42373564 -157256586 - MLT2B3 LTR ERVL 0 554 1 2054 98 0 0 chr5 42373687 42373952 -157256198 - AluSx SINE Alu -45 267 3 189 189 47 9 chr5 42374820 42374926 -157255224 + (TA)n Simple_repeat Simple_repeat 2 111 0 401 344 172 0 chr5 42374938 42375165 -157254985 + L3 LINE CR1 1304 1569 -8 1146 189 65 119 chr5 42375469 42375881 -157254269 + MLT1C LTR MaLR 1 467 0 195 42 0 0 chr5 42375958 42375982 -157254168 + (CA)n Simple_repeat Simple_repeat 1 24 0 494 297 21 81 chr5 42376083 42376416 -157253734 - L1MC4 LINE L1 -1962 5846 5534 1502 96 0 19 chr5 42376762 42376970 -157253180 - AluY SINE Alu -10 301 98 358 219 26 3 chr5 42378651 42378740 -157251410 + L1MC/D LINE L1 5680 5766 -400 192 406 83 0 chr5 42379216 42379349 -157250801 - MIR3 SINE MIR -2 206 63 2201 66 10 7 chr5 42379831 42380151 -157249999 - AluY SINE Alu 0 321 1 1175 302 63 2 chr5 42382697 42383108 -157247042 + L2 LINE L2 2169 2604 -710 2006 122 7 0 chr5 42383177 42383494 -157246656 + AluSc SINE Alu 1 319 0 310 395 59 9 chr5 42383531 42383791 -157246359 + L2 LINE L2 2787 3054 -259 1161 284 91 30 chr5 42383796 42384268 -157245882 - LTR33A LTR ERVL 0 523 23 280 258 45 45 chr5 42384397 42384486 -157245664 + L2 LINE L2 3221 3309 -4 33 43 0 0 chr5 42384905 42384952 -157245198 + AT_rich Low_complexity Low_complexity 1 47 0 309 291 115 64 chr5 42385155 42385389 -157244761 - L3b LINE CR1 -27 1556 1311 603 288 107 17 chr5 42385930 42386163 -157243987 - MIR SINE MIR -1 261 8 318 106 0 0 chr5 42386869 42386916 -157243234 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 121 0 0 chr5 42386943 42386976 -157243174 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 184 338 97 28 chr5 42387119 42387264 -157242886 + L2 LINE L2 2907 3061 -252 381 235 181 72 chr5 42388140 42388361 -157241789 - MIR SINE MIR -10 252 8 448 258 182 0 chr5 42388361 42388493 -157241657 + MER5A DNA MER1_type 33 188 -1 2323 88 0 3 chr5 42388773 42389069 -157241081 + AluSc SINE Alu 1 295 -14 1926 138 13 7 chr5 42389903 42390208 -157239942 + AluJb SINE Alu 1 307 -5 367 313 0 0 chr5 42390318 42390417 -157239733 - L2 LINE L2 -8 3305 3207 298 245 90 75 chr5 42390454 42390642 -157239508 + L2 LINE L2 3123 3313 0 27 29 0 0 chr5 42390777 42390811 -157239339 + AT_rich Low_complexity Low_complexity 1 34 0 385 219 8 62 chr5 42391139 42391267 -157238883 + MER103 DNA DNA 2 122 -44 182 279 87 48 chr5 42391488 42391592 -157238558 - L2 LINE L2 -3 3269 3162 282 243 68 0 chr5 42391710 42391784 -157238366 - MIR SINE MIR -110 98 20 219 288 51 68 chr5 42392144 42392262 -157237888 - MIR3 SINE MIR -11 197 82 356 273 27 0 chr5 42392470 42392580 -157237570 - MIR SINE MIR -142 120 8 408 321 11 60 chr5 42392704 42392969 -157237181 - MARNA DNA Mariner -8 578 327 5076 139 25 5 chr5 42393569 42394402 -157235748 + L1PA16 LINE L1 5317 6166 0 23 33 0 0 chr5 42394944 42394974 -157235176 + AT_rich Low_complexity Low_complexity 1 30 0 195 256 215 6 chr5 42396034 42396136 -157234014 - MER5B DNA MER1_type -68 121 1 564 241 84 12 chr5 42396153 42396319 -157233831 - MER5B DNA MER1_type 0 178 1 1026 226 110 28 chr5 42397588 42397907 -157232243 - MER2 DNA MER2_type 0 345 1 232 200 0 0 chr5 42398094 42398139 -157232011 - L2 LINE L2 0 3313 3269 396 338 89 24 chr5 42398871 42399084 -157231066 + MIR SINE MIR 17 243 -19 1215 258 130 17 chr5 42399674 42400494 -157229656 - L2 LINE L2 0 3313 2411 249 316 32 42 chr5 42400759 42400854 -157229296 + MER5B DNA MER1_type 64 157 -21 399 320 28 6 chr5 42401105 42401283 -157228867 + MER117 DNA MER1_type 14 195 -2 214 178 0 22 chr5 42402662 42402707 -157227443 + (CATA)n Simple_repeat Simple_repeat 3 46 0 441 0 0 0 chr5 42402707 42402756 -157227394 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 369 58 0 0 chr5 42403574 42403626 -157226524 + (TA)n Simple_repeat Simple_repeat 2 53 0 956 260 71 57 chr5 42404699 42405371 -157224779 - L1ME1 LINE L1 -217 5949 5240 204 97 0 0 chr5 42405371 42405402 -157224748 + (TG)n Simple_repeat Simple_repeat 2 32 0 25 90 0 0 chr5 42405404 42405471 -157224679 + AT_rich Low_complexity Low_complexity 1 67 0 2542 26 7 13 chr5 42406225 42406532 -157223618 - AluY SINE Alu -6 305 1 413 123 0 31 chr5 42407448 42407513 -157222637 + AluS SINE Alu 227 289 -23 36 0 0 0 chr5 42407513 42407549 -157222601 + AT_rich Low_complexity Low_complexity 1 36 0 484 275 66 109 chr5 42407921 42408132 -157222018 - MIR SINE MIR -39 223 22 211 211 28 55 chr5 42408179 42408288 -157221862 + A-rich Low_complexity Low_complexity 3 108 0 720 138 0 166 chr5 42410861 42411078 -157219072 + MER96B DNA MER1_type? 1 181 -236 22 0 0 0 chr5 42411941 42411963 -157218187 + AT_rich Low_complexity Low_complexity 1 22 0 188 278 74 0 chr5 42412648 42412702 -157217448 + L2 LINE L2 3214 3271 -1 180 0 0 0 chr5 42412770 42412790 -157217360 + (T)n Simple_repeat Simple_repeat 1 20 0 459 301 63 0 chr5 42413033 42413176 -157216974 - MIR SINE MIR -1 261 110 400 230 0 0 chr5 42413365 42413439 -157216711 + L1ME LINE L1 11 84 -6775 28 0 0 0 chr5 42413473 42413501 -157216649 + AT_rich Low_complexity Low_complexity 1 28 0 261 132 21 79 chr5 42413507 42413697 -157216453 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 253 178 55 41 chr5 42413709 42413855 -157216295 + (TATAA)n Simple_repeat Simple_repeat 5 152 0 345 71 15 116 chr5 42413867 42414065 -157216085 + (TTATA)n Simple_repeat Simple_repeat 1 178 0 41 21 0 0 chr5 42414065 42414113 -157216037 + AT_rich Low_complexity Low_complexity 1 48 0 6770 231 56 25 chr5 42414213 42416446 -157213704 + L1ME LINE L1 3716 6016 -941 390 325 36 0 chr5 42416589 42416783 -157213367 + L1ME LINE L1 6373 6573 -359 22 35 0 0 chr5 42417422 42417451 -157212699 + AT_rich Low_complexity Low_complexity 1 29 0 941 217 5 0 chr5 42418325 42418509 -157211641 - MER5A DNA MER1_type -3 186 2 2015 122 3 3 chr5 42419776 42420102 -157210048 + AluSq SINE Alu 1 326 0 519 230 96 86 chr5 42420133 42420234 -157209916 + MIR SINE MIR 52 151 -111 2322 102 3 0 chr5 42420234 42420539 -157209611 - AluSx SINE Alu -6 306 1 519 230 96 86 chr5 42420539 42420646 -157209504 + MIR SINE MIR 151 262 0 472 308 25 0 chr5 42420669 42420789 -157209361 + L2 LINE L2 3150 3272 0 925 198 49 21 chr5 42420931 42421174 -157208976 + LTR23 LTR ERV1 161 410 -27 406 300 15 8 chr5 42421629 42421759 -157208391 + MIR SINE MIR 31 161 -101 1712 184 3 10 chr5 42422894 42423204 -157206946 + AluJo SINE Alu 1 308 -4 1710 171 4 11 chr5 42423260 42423712 -157206438 - AluJb SINE Alu 0 454 5 287 340 100 0 chr5 42423756 42423856 -157206294 + L2 LINE L2 3163 3272 0 1231 272 80 53 chr5 42423907 42424356 -157205794 + LTR16B LTR ERVL 2 462 -2 23 0 0 0 chr5 42425532 42425555 -157204595 + AT_rich Low_complexity Low_complexity 1 23 0 342 0 0 0 chr5 42425685 42425723 -157204427 + (TG)n Simple_repeat Simple_repeat 2 39 0 230 286 29 43 chr5 42426301 42426371 -157203779 + MER5A DNA MER1_type 51 119 -70 220 321 25 12 chr5 42426855 42426936 -157203214 + MIR3 SINE MIR 121 202 -6 2116 197 17 38 chr5 42427800 42428277 -157201873 - MLT1C LTR MaLR 0 467 1 1820 133 56 0 chr5 42428313 42428583 -157201567 - AluJb SINE Alu -27 285 1 188 349 36 36 chr5 42429267 42429350 -157200800 - L2 LINE L2 -2 3270 3188 184 307 34 91 chr5 42430908 42430996 -157199154 - L2 LINE L2 -89 3183 3101 232 338 150 8 chr5 42430998 42431131 -157199019 + MIR3 SINE MIR 9 160 -48 440 211 140 0 chr5 42431131 42431245 -157198905 - MER113 DNA MER1_type? 0 521 392 261 244 32 16 chr5 42431397 42431520 -157198630 - MER113 DNA MER1_type? -393 128 4 308 253 48 0 chr5 42433719 42433802 -157196348 + MIR SINE MIR 106 192 -70 2645 113 0 0 chr5 42433915 42434279 -157195871 - THE1B LTR MaLR 0 364 1 1553 71 9 0 chr5 42434667 42434877 -157195273 + L1PA7 LINE L1 5943 6154 0 270 231 0 0 chr5 42435239 42435291 -157194859 + L2 LINE L2 3221 3272 0 387 270 11 0 chr5 42436307 42436396 -157193754 - MER81 DNA DNA -24 90 1 533 236 176 7 chr5 42436413 42436561 -157193589 - MER5A DNA MER1_type -13 176 4 * 706 273 123 0 chr5 42436561 42436781 -157193369 + MIR SINE MIR 15 262 0 446 271 98 35 chr5 42437191 42437394 -157192756 + MIR SINE MIR 47 262 0 234 0 0 0 chr5 42438544 42438570 -157191580 + (A)n Simple_repeat Simple_repeat 1 26 0 613 254 68 6 chr5 42438749 42438926 -157191224 - MIR SINE MIR -65 197 10 290 358 73 28 chr5 42439350 42439529 -157190621 + MIR3 SINE MIR 19 205 -3 591 295 60 30 chr5 42489934 42490134 -157140016 - MIR SINE MIR -49 213 8 513 246 37 0 chr5 42490296 42490430 -157139720 + MIR3 SINE MIR 60 198 -10 318 26 0 0 chr5 42490637 42490676 -157139474 + (T)n Simple_repeat Simple_repeat 1 39 0 514 325 133 21 chr5 42491197 42491572 -157138578 + L2 LINE L2 2804 3220 -93 1852 116 34 27 chr5 42491923 42492215 -157137935 - AluSg SINE Alu -16 294 1 840 312 43 4 chr5 42494456 42494687 -157135463 - MIR SINE MIR -4 258 19 240 180 16 16 chr5 42495722 42495783 -157134367 + (TA)n Simple_repeat Simple_repeat 2 62 0 2230 79 0 0 chr5 42496797 42497087 -157133063 - AluSg SINE Alu -20 290 1 349 315 22 0 chr5 42498342 42498434 -157131716 + MIR SINE MIR 36 129 -79 261 0 0 0 chr5 42499402 42499431 -157130719 + (TG)n Simple_repeat Simple_repeat 1 29 0 1028 203 75 98 chr5 42499536 42499871 -157130279 + MLT2D LTR ERVL 83 409 -5 1285 275 48 18 chr5 42499963 42500400 -157129750 - LTR16A LTR ERVL 0 450 1 1269 272 81 25 chr5 42500409 42500879 -157129271 + MLT1J LTR MaLR 8 503 -8 1542 184 21 23 chr5 42500884 42501303 -157128847 + Tigger5 DNA MER2_type 2 2323 0 1963 226 149 13 chr5 42502009 42502531 -157127619 + MLT1E LTR MaLR 1 593 0 765 299 42 0 chr5 42502918 42503135 -157127015 + MIR SINE MIR 25 250 -12 958 209 6 0 chr5 42503288 42503465 -157126685 - MER5B DNA MER1_type 0 178 1 544 276 99 0 chr5 42503686 42503838 -157126312 - MIR SINE MIR -17 245 79 190 276 132 13 chr5 42503912 42503988 -157126162 + MIR3 SINE MIR 117 201 -7 414 252 43 29 chr5 42505045 42505184 -157124966 - MER5B DNA MER1_type -1 177 37 1646 169 7 19 chr5 42505184 42505492 -157124658 + AluJo SINE Alu 1 304 -8 270 184 20 0 chr5 42505511 42505560 -157124590 - MER5B DNA MER1_type -128 50 1 277 318 12 0 chr5 42505989 42506074 -157124076 + CT-rich Low_complexity Low_complexity 1 86 0 586 338 36 42 chr5 42506395 42506703 -157123447 + L3 LINE CR1 340 645 -932 1480 246 96 40 chr5 42506870 42507390 -157122760 + MLT1H LTR MaLR 1 549 0 392 304 75 104 chr5 42507396 42507877 -157122273 + L2 LINE L2 2806 3272 0 1955 149 71 31 chr5 42507920 42508270 -157121880 - THE1B LTR MaLR 0 364 1 524 340 85 28 chr5 42508659 42508941 -157121209 + L3 LINE CR1 1218 1515 -62 461 281 8 16 chr5 42509189 42509317 -157120833 - L2 LINE L2 -12 3301 3175 335 248 0 48 chr5 42509369 42509474 -157120676 + LTR67 LTR ERVL 457 556 -1 21 0 0 0 chr5 42509755 42509776 -157120374 + AT_rich Low_complexity Low_complexity 1 21 0 325 278 40 66 chr5 42510808 42510959 -157119191 + MIR3 SINE MIR 56 202 -6 4124 123 59 75 chr5 42511175 42511973 -157118177 - LTR1 LTR ERV1 0 785 1 1697 100 20 15 chr5 42512146 42512617 -157117533 - MER4A LTR ERV1 0 664 35 2225 60 0 7 chr5 42514474 42514782 -157115368 + AluSx SINE Alu 1 306 0 580 230 235 14 chr5 42514953 42515166 -157114984 + MIR SINE MIR 3 262 0 771 61 0 0 chr5 42515377 42515475 -157114675 + L1PA5 LINE L1 6057 6154 0 238 182 0 0 chr5 42515475 42515519 -157114631 + Charlie2 DNA MER1_type 2819 2862 0 648 314 67 37 chr5 42516835 42517430 -157112720 + L1ME3A LINE L1 4574 5186 -960 1329 160 23 0 chr5 42517433 42517652 -157112498 + AluJb SINE Alu 83 306 -6 1250 271 117 27 chr5 42517652 42518249 -157111901 + L1ME3A LINE L1 5179 5854 -316 2247 106 0 3 chr5 42518249 42518541 -157111609 + AluSx SINE Alu 1 291 -21 1250 271 117 27 chr5 42518541 42518649 -157111501 + L1ME3A LINE L1 5854 5951 -219 1132 256 55 28 chr5 42518882 42519281 -157110869 - L1MD2 LINE L1 -10 6349 5940 2250 91 10 7 chr5 42519321 42519617 -157110533 - AluY SINE Alu -14 297 1 447 19 0 0 chr5 42519669 42519721 -157110429 + (CA)n Simple_repeat Simple_repeat 1 52 0 247 294 31 19 chr5 42519959 42520119 -157110031 - L1M4 LINE L1 -2904 3242 3081 226 239 239 0 chr5 42521197 42521289 -157108861 + LTR33 LTR ERVL 1 114 -407 304 227 121 0 chr5 42521306 42521372 -157108778 + LTR16A LTR ERVL 365 438 -12 2021 265 112 37 chr5 42521382 42522187 -157107963 - HAL1 LINE L1 -37 2470 1606 256 150 0 0 chr5 42522633 42522673 -157107477 + L1MC4 LINE L1 5784 5823 -1985 * 802 131 16 0 chr5 42522641 42522763 -157107387 + L1PA13 LINE L1 5794 5917 -246 1449 136 0 0 chr5 42522763 42522961 -157107189 + AluSg/x SINE Alu 86 283 -29 2022 70 15 11 chr5 42522978 42523248 -157106902 + L1PA13 LINE L1 5893 6163 0 251 254 15 0 chr5 42523305 42523372 -157106778 + (TA)n Simple_repeat Simple_repeat 1 68 0 234 286 12 12 chr5 42523537 42523621 -157106529 - LTR33 LTR ERVL -48 473 390 2895 161 46 5 chr5 42523629 42524584 -157105566 + L1M2 LINE L1 4741 5789 -523 239 203 101 0 chr5 42524589 42524658 -157105492 + L1MCa LINE L1 1995 2070 -4356 232 161 161 0 chr5 42524668 42524724 -157105426 + L1MCa LINE L1 2006 2070 -4356 232 242 0 63 chr5 42524746 42524841 -157105309 + L1MC4 LINE L1 6615 6703 -1339 360 286 13 9 chr5 42524849 42525085 -157105065 + (CATATA)n Simple_repeat Simple_repeat 1 236 0 461 308 0 0 chr5 42525089 42525410 -157104740 + (TA)n Simple_repeat Simple_repeat 1 321 0 234 214 56 45 chr5 42525455 42525544 -157104606 - L1MC4 LINE L1 -1339 6703 6614 * 299 264 0 22 chr5 42525530 42525621 -157104529 + L1MC4 LINE L1 6614 6702 -1340 759 237 36 47 chr5 42525631 42525884 -157104266 + pTR5 LTR ERV1 743 992 -1446 5623 80 12 118 chr5 42525971 42526895 -157103255 + LTR12 LTR ERV1 1 826 0 189 269 0 0 chr5 42526895 42526962 -157103188 + (TA)n Simple_repeat Simple_repeat 1 67 0 236 344 0 0 chr5 42526996 42527086 -157103064 + L1MC4 LINE L1 6614 6703 -1339 548 380 0 0 chr5 42527093 42527321 -157102829 + (CGTG)n Simple_repeat Simple_repeat 1 228 0 2495 166 69 14 chr5 42527377 42527872 -157102278 + L1MA9 LINE L1 5778 6299 -13 24 0 0 0 chr5 42527872 42527896 -157102254 + AT_rich Low_complexity Low_complexity 1 24 0 1902 161 20 0 chr5 42527917 42528043 -157102107 + AluSx SINE Alu 1 123 -189 333 0 0 0 chr5 42528043 42528080 -157102070 + (CA)n Simple_repeat Simple_repeat 2 38 0 1902 161 20 0 chr5 42528080 42528252 -157101898 + AluSx SINE Alu 123 305 -7 837 60 0 0 chr5 42528415 42528531 -157101619 + (CCA)n Simple_repeat Simple_repeat 2 117 0 25 31 0 0 chr5 42528881 42528913 -157101237 + AT_rich Low_complexity Low_complexity 1 32 0 711 245 17 33 chr5 42529132 42529373 -157100777 + L1MC5 LINE L1 7689 7925 -36 2341 97 0 3 chr5 42530529 42530838 -157099312 - AluSc SINE Alu -1 308 1 245 304 148 22 chr5 42530849 42530984 -157099166 + MLT1I LTR MaLR 18 169 -240 233 187 77 110 chr5 42531158 42531229 -157098921 + MLT1H LTR MaLR 446 515 -34 1337 205 64 53 chr5 42531229 42531590 -157098560 + MLT1A1 LTR MaLR 1 365 0 233 187 77 110 chr5 42531590 42531609 -157098541 + MLT1H LTR MaLR 515 533 -16 1530 186 26 42 chr5 42531771 42532087 -157098063 + MLT1A1 LTR MaLR 11 584 -42 258 318 24 63 chr5 42532154 42532280 -157097870 - LTR67 LTR ERVL -338 219 99 483 237 90 32 chr5 42533112 42533268 -157096882 + MLT1J LTR MaLR 3 167 -344 273 276 17 52 chr5 42533332 42533443 -157096707 + MLT1J LTR MaLR 376 482 -29 1225 267 55 32 chr5 42533443 42533968 -157096182 + MER34 LTR ERV1 1 537 -5 290 292 169 8 chr5 42534284 42534414 -157095736 + MIR SINE MIR 29 179 -83 413 208 240 8 chr5 42534462 42534587 -157095563 - MER69 DNA AcHobo -1072 154 1 374 284 155 7 chr5 42534628 42534776 -157095374 - MER91A DNA MER1_type 0 196 27 331 346 49 43 chr5 42534789 42534951 -157095199 + MER91A DNA MER1_type 14 176 -20 2661 131 85 7 chr5 42535340 42535789 -157094361 + MER31A LTR ERV1 1 484 -1 1074 38 16 33 chr5 42536029 42536212 -157093938 + (TC)n Simple_repeat Simple_repeat 1 180 0 967 58 40 6 chr5 42536236 42536410 -157093740 + (TC)n Simple_repeat Simple_repeat 1 180 0 319 199 0 31 chr5 42536608 42536699 -157093451 - L1ME LINE L1 -567 5554 5470 584 236 158 4 chr5 42537439 42537680 -157092470 - L1ME4a LINE L1 -74 6047 5770 519 265 197 18 chr5 42537732 42538021 -157092129 + MLT1J2 LTR MaLR 44 385 -65 2224 115 0 7 chr5 42538253 42538557 -157091593 - AluSq SINE Alu -11 302 1 1937 174 0 0 chr5 42538599 42538903 -157091247 + AluJb SINE Alu 1 304 -8 42 20 0 0 chr5 42539254 42539303 -157090847 + AT_rich Low_complexity Low_complexity 1 49 0 184 327 36 0 chr5 42539313 42539368 -157090782 + L2 LINE L2 15 71 -3243 2273 113 7 0 chr5 42539381 42539681 -157090469 - AluSq SINE Alu -11 302 1 319 241 55 90 chr5 42540507 42540652 -157089498 + L2 LINE L2 3174 3313 0 240 285 181 27 chr5 42540927 42541148 -157089002 - L1MC/D LINE L1 -1898 5910 5656 2159 113 3 0 chr5 42541252 42541545 -157088605 - AluSx SINE Alu -18 294 1 2465 271 68 50 chr5 42542352 42544256 -157085894 + L1ME LINE L1 8 1971 -4109 780 179 0 15 chr5 42544266 42544400 -157085750 + FLAM_A SINE Alu 10 141 -1 572 233 20 51 chr5 42544401 42544654 -157085496 + L1ME LINE L1 1996 2240 -4021 2183 180 50 61 chr5 42545222 42545257 -157084893 + LTR45B LTR ERV1 1 35 -748 1806 108 58 11 chr5 42545257 42545535 -157084615 - L1PA15 LINE L1 0 6165 5875 2183 180 50 61 chr5 42545535 42545999 -157084151 + LTR45B LTR ERV1 35 783 0 1744 169 14 0 chr5 42546209 42546488 -157083662 + AluJb SINE Alu 1 283 -29 193 291 64 82 chr5 42546872 42546982 -157083168 - L2 LINE L2 -802 2512 2405 2287 84 10 3 chr5 42547339 42547681 -157082469 + AluY SINE Alu 1 311 0 1539 206 82 20 chr5 42547852 42548255 -157081895 - MLT1C LTR MaLR 0 467 40 2524 53 3 0 chr5 42549217 42549519 -157080631 + AluY SINE Alu 1 303 -8 307 195 81 35 chr5 42550986 42551073 -157079077 - MIR SINE MIR -134 128 38 215 241 19 0 chr5 42551120 42551174 -157078976 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 189 306 139 19 chr5 42551335 42551473 -157078677 + MIR SINE MIR 14 164 -68 * 748 217 150 24 chr5 42551470 42551677 -157078473 - MIR SINE MIR -25 237 5 272 207 310 9 chr5 42551877 42551993 -157078157 - L3 LINE CR1 -109 1468 1318 271 323 111 30 chr5 42552871 42552964 -157077186 - L1MC4a LINE L1 -1904 5904 5820 1787 166 0 13 chr5 42552964 42553266 -157076884 - AluJo SINE Alu -14 298 1 271 323 111 30 chr5 42553266 42553469 -157076681 - L1MC4a LINE L1 -1988 5820 5584 293 256 128 69 chr5 42553473 42553848 -157076302 - L1MC4a LINE L1 -1174 4972 4576 558 332 9 18 chr5 42553935 42554152 -157075998 + MIR SINE MIR 42 256 -6 550 245 197 0 chr5 42554287 42554434 -157075716 - MER5A DNA MER1_type -1 188 13 202 206 0 0 chr5 42554571 42554605 -157075545 + polypyrimidine Low_complexity Low_complexity 3 36 0 438 305 58 0 chr5 42555533 42555723 -157074427 - LTR16B LTR ERVL -3 461 261 448 293 88 71 chr5 42555875 42555905 -157074245 - L1MC4a LINE L1 -1904 5904 5876 2385 133 30 25 chr5 42555905 42556267 -157073883 + THE1B LTR MaLR 1 364 0 448 293 88 71 chr5 42556267 42556872 -157073278 - L1MC4a LINE L1 -1932 5876 5258 2583 46 0 3 chr5 42556901 42557206 -157072944 - AluY SINE Alu -7 304 1 612 323 5 5 chr5 42557496 42557682 -157072468 - MIR SINE MIR -65 197 12 240 282 191 18 chr5 42558853 42558963 -157071187 - L2 LINE L2 -1 3271 3143 1558 286 55 66 chr5 42559383 42560215 -157069935 + L2 LINE L2 2120 2942 -372 303 167 0 83 chr5 42560246 42560318 -157069832 - LTR33 LTR ERVL 0 521 456 724 311 91 12 chr5 42560365 42560696 -157069454 - HsTC2a DNA Tc2 -293 451 95 1591 181 24 3 chr5 42560822 42561115 -157069035 - AluJo SINE Alu -13 299 1 948 127 48 6 chr5 42561670 42561836 -157068314 - L1MA6 LINE L1 0 6300 6128 2251 122 0 0 chr5 42561837 42562141 -157068009 - AluSx SINE Alu -8 304 1 9724 151 33 6 chr5 42562163 42564852 -157065298 - L1MA4A LINE L1 -11 6994 4238 2020 108 14 14 chr5 42564852 42565130 -157065020 - AluSq SINE Alu -19 294 17 484 235 111 0 chr5 42565130 42565283 -157064867 - L1MA4A LINE L1 -3213 3635 3466 6448 62 19 47 chr5 42565291 42566270 -157063880 - SVA Other Other -2 1384 433 5829 54 11 49 chr5 42566328 42567388 -157062762 - SVA Other Other -520 866 1 2224 100 7 0 chr5 42567439 42567729 -157062421 + AluSc SINE Alu 1 292 -17 11128 196 42 73 chr5 42567729 42571295 -157058855 - L1MA4A LINE L1 -3389 3459 2 22 0 0 0 chr5 42571533 42571555 -157058595 + AT_rich Low_complexity Low_complexity 1 22 0 616 246 140 74 chr5 42572331 42572466 -157057684 - MLT1H LTR MaLR -146 403 278 2938 79 3 0 chr5 42572466 42572820 -157057330 + THE1A LTR MaLR 1 355 0 616 246 140 74 chr5 42572820 42573062 -157057088 - MLT1H LTR MaLR -271 278 1 21 0 0 0 chr5 42573742 42573763 -157056387 + AT_rich Low_complexity Low_complexity 1 21 0 1512 70 0 11 chr5 42574427 42574614 -157055536 - AluSg/x SINE Alu -6 304 120 3933 123 40 26 chr5 42574642 42575245 -157054905 - LTR36 LTR ERV1 0 611 1 395 232 46 111 chr5 42575718 42575998 -157054152 - L1ME4a LINE L1 -91 6030 5769 505 284 128 0 chr5 42576118 42576259 -157053891 + MIR3 SINE MIR 19 177 -31 189 378 104 0 chr5 42576450 42576585 -157053565 - L2 LINE L2 0 3272 3124 368 222 60 8 chr5 42576716 42576833 -157053317 - L1ME4a LINE L1 -1 6120 5998 2577 196 27 34 chr5 42577099 42577593 -157052557 - L1MB5 LINE L1 -69 6105 5603 292 170 0 0 chr5 42577593 42577640 -157052510 - Alu SINE Alu -8 294 248 2577 196 27 34 chr5 42577640 42577911 -157052239 - L1MB5 LINE L1 -571 5603 5332 1144 133 25 36 chr5 42577911 42578141 -157052009 - AluJb SINE Alu 0 312 93 729 191 22 11 chr5 42578144 42578327 -157051823 - L1MB5 LINE L1 -813 5333 5149 189 0 0 0 chr5 42578334 42578355 -157051795 + (TTG)n Simple_repeat Simple_repeat 1 21 0 303 313 100 12 chr5 42578885 42579045 -157051105 + MIR SINE MIR 89 262 0 270 289 175 26 chr5 42580069 42580183 -157049967 + MIR3 SINE MIR 76 206 -2 2060 114 0 0 chr5 42583724 42583996 -157046154 - AluSg SINE Alu -11 299 28 21 0 0 0 chr5 42584004 42584025 -157046125 + AT_rich Low_complexity Low_complexity 1 21 0 809 241 17 0 chr5 42586220 42586394 -157043756 - MER58A DNA MER1_type -1 223 47 2078 128 0 0 chr5 42586394 42586676 -157043474 + AluSx SINE Alu 1 282 -30 820 261 73 5 chr5 42586862 42587080 -157043070 - MIR SINE MIR -29 233 1 1295 158 10 5 chr5 42587133 42587336 -157042814 + AluSx SINE Alu 1 204 -108 225 234 63 81 chr5 42587434 42587545 -157042605 + MIR SINE MIR 2 110 -152 435 275 142 18 chr5 42588544 42588778 -157041372 + MIR SINE MIR 5 262 0 862 278 93 34 chr5 42590682 42591227 -157038923 - L1ME3 LINE L1 -197 5924 5346 865 313 61 17 chr5 42591365 42592008 -157038142 - L1MB5 LINE L1 -1047 5099 4429 3498 130 23 50 chr5 42592013 42592630 -157037520 - LTR9B LTR ERV1 0 644 45 548 323 88 42 chr5 42592861 42593474 -157036676 - HAL1b LINE L1 -641 707 67 524 266 137 43 chr5 42593708 42594269 -157035881 - L1MB5 LINE L1 -2797 3349 2736 545 220 68 30 chr5 42594281 42594413 -157035737 + MER5A DNA MER1_type 9 145 -44 2472 210 60 102 chr5 42594424 42595344 -157034806 - MER65-int LTR ERV1 -3567 1304 424 839 318 33 15 chr5 42595445 42595844 -157034306 + L1PA12 LINE L1 10 415 -7166 265 338 36 7 chr5 42596223 42596362 -157033788 + L1M2 LINE L1 689 831 -6018 359 335 65 82 chr5 42596510 42596680 -157033470 + L1M2 LINE L1 901 1067 -5782 1049 284 31 25 chr5 42596890 42597341 -157032809 + L1PA12 LINE L1 1781 2326 -5258 7549 180 47 25 chr5 42597342 42599457 -157030693 + L1PA12 LINE L1 2467 4686 -2898 * 16323 167 22 9 chr5 42599454 42603044 -157027106 - L1M1 LINE L1 -743 6822 3213 2200 114 3 16 chr5 42603050 42603358 -157026792 - AluSg SINE Alu -6 304 1 7316 160 32 10 chr5 42603359 42604606 -157025544 - L1M1 LINE L1 -6275 1290 17 2291 155 63 24 chr5 42604619 42605045 -157025105 - MER65A LTR ERV1 0 445 3 6401 160 21 20 chr5 42605046 42606114 -157024036 - MER70A-int LTR ERVL -2334 2689 1621 5023 170 54 21 chr5 42606114 42607218 -157022932 - MER70A-int LTR ERVL -3832 1191 1 2170 189 25 12 chr5 42607218 42607620 -157022530 - MER70A LTR ERVL 0 472 66 364 180 34 22 chr5 42607693 42607782 -157022368 - L1ME LINE L1 -5905 165 76 197 65 32 0 chr5 42608408 42608439 -157021711 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 211 240 49 0 chr5 42609218 42609293 -157020857 - MIR SINE MIR -63 145 65 2378 80 3 0 chr5 42609311 42609599 -157020551 + AluSg SINE Alu 5 293 -17 569 313 65 5 chr5 42609610 42609824 -157020326 - MIR SINE MIR -21 241 15 473 154 154 0 chr5 42611134 42611238 -157018912 + L1 LINE L1 4124 4243 -1903 16334 214 48 41 chr5 42611238 42614827 -157015323 + L1PA16 LINE L1 101 3662 -3155 2006 112 0 4 chr5 42614827 42615094 -157015056 + AluSg SINE Alu 1 266 -44 16334 214 48 41 chr5 42615094 42617366 -157012784 + L1PA16 LINE L1 3662 5983 -834 2262 100 0 3 chr5 42617366 42617665 -157012485 + AluY SINE Alu 1 298 -13 16334 214 48 41 chr5 42617665 42617816 -157012334 + L1PA16 LINE L1 5983 6131 -686 1010 223 37 8 chr5 42618199 42618441 -157011709 - MLT1B LTR MaLR 0 390 142 4325 116 58 0 chr5 42618425 42619095 -157011055 + L1PA16 LINE L1 6103 6811 -6 987 242 13 17 chr5 42620449 42620680 -157009470 + MIR SINE MIR 33 262 0 187 358 196 7 chr5 42620900 42621048 -157009102 - L2 LINE L2 -1 3271 3096 1252 276 18 63 chr5 42621952 42622430 -157007720 - MER115 DNA AcHobo 0 4031 235 496 136 0 0 chr5 42624776 42624857 -157005293 - MER53 DNA DNA 0 189 109 577 236 51 60 chr5 42625236 42625452 -157004698 - MER58C DNA MER1_type -1 214 1 1844 127 0 0 chr5 42626908 42627168 -157002982 - AluSq SINE Alu -48 265 6 21 0 0 0 chr5 42627484 42627505 -157002645 + AT_rich Low_complexity Low_complexity 1 21 0 233 260 91 0 chr5 42627714 42627791 -157002359 - L1ME LINE L1 -515 5606 5523 342 247 49 0 chr5 42628241 42628359 -157001791 + MIR3 SINE MIR 72 196 -12 2501 111 5 13 chr5 42630438 42630816 -156999334 - THE1C LTR MaLR 0 375 1 9856 96 42 63 chr5 42630816 42632430 -156997720 - THE1C-int LTR MaLR 0 1580 1 2563 102 16 8 chr5 42632430 42632802 -156997348 - THE1C LTR MaLR 0 375 1 753 193 52 57 chr5 42633628 42633867 -156996283 + L1ME LINE L1 5461 5690 -472 2068 114 119 35 chr5 42633879 42634308 -156995842 + MER4C LTR ERV1 1 465 0 1955 115 150 35 chr5 42634756 42635023 -156995127 - MER65A LTR ERV1 0 445 116 405 0 0 0 chr5 42635023 42635068 -156995082 + (TG)n Simple_repeat Simple_repeat 2 46 0 1955 115 150 35 chr5 42635068 42635199 -156994951 - MER65A LTR ERV1 -329 116 1 304 250 12 38 chr5 42635307 42635431 -156994719 - MLT1G LTR MaLR 0 586 431 183 80 0 0 chr5 42635799 42635824 -156994326 + (TTGG)n Simple_repeat Simple_repeat 4 28 0 699 243 115 13 chr5 42636296 42636531 -156993619 - MIR SINE MIR -3 259 1 210 287 79 40 chr5 42638554 42638655 -156991495 + L2 LINE L2 3156 3260 -12 1471 171 4 16 chr5 42638659 42638905 -156991245 - AluSx SINE Alu -69 243 1 2260 114 3 0 chr5 42638928 42639235 -156990915 - AluSq SINE Alu -5 308 1 440 260 27 47 chr5 42639803 42639953 -156990197 + MER5A DNA MER1_type 42 188 -1 410 282 95 21 chr5 42640231 42640472 -156989678 - L1MC5 LINE L1 -60 7901 7643 2187 70 7 3 chr5 42641147 42641434 -156988716 - AluY SINE Alu -23 288 1 21 36 0 0 chr5 42642583 42642611 -156987539 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chr5 42644232 42644256 -156985894 + (A)n Simple_repeat Simple_repeat 1 24 0 36 23 0 0 chr5 42645642 42645685 -156984465 + AT_rich Low_complexity Low_complexity 1 43 0 1368 195 30 50 chr5 42646554 42646857 -156983293 - AluJo SINE Alu -15 297 1 2300 116 3 0 chr5 42647633 42647944 -156982206 + AluSx SINE Alu 1 312 0 2014 138 58 5 chr5 42648053 42648430 -156981720 - Charlie1 DNA MER1_type -8 2753 2357 26 0 0 0 chr5 42651942 42651968 -156978182 + AT_rich Low_complexity Low_complexity 1 26 0 187 229 0 83 chr5 42652240 42652288 -156977862 - L2 LINE L2 -15 3257 3214 205 213 128 0 chr5 42652699 42652746 -156977404 - MIR3 SINE MIR -48 160 108 224 181 0 191 chr5 42653028 42653122 -156977028 - MIR SINE MIR -3 259 184 573 151 40 151 chr5 42655518 42655717 -156974433 + MER104 DNA MER2_type 1 177 -3 28 29 0 0 chr5 42657683 42657718 -156972432 + AT_rich Low_complexity Low_complexity 1 35 0 610 328 42 0 chr5 42657822 42658014 -156972136 + MIR SINE MIR 48 247 -15 1481 150 122 0 chr5 42659141 42659435 -156970715 + MER46B DNA MER2_type 32 236 0 313 351 157 39 chr5 42659944 42660562 -156969588 + L2 LINE L2 2197 2887 -427 1928 142 14 3 chr5 42662057 42662353 -156967797 + AluSx SINE Alu 1 299 -13 24 32 0 0 chr5 42662727 42662758 -156967392 + AT_rich Low_complexity Low_complexity 1 31 0 736 114 79 0 chr5 42663492 42663632 -156966518 - L1MA9 LINE L1 0 6312 6162 388 277 85 21 chr5 42664221 42664362 -156965788 - MIR SINE MIR -74 188 39 2095 118 17 91 chr5 42664790 42665195 -156964955 + THE1C LTR MaLR 1 375 0 217 235 0 0 chr5 42665608 42665659 -156964491 + (CAATT)n Simple_repeat Simple_repeat 4 54 0 23 0 0 0 chr5 42666530 42666553 -156963597 + AT_rich Low_complexity Low_complexity 1 23 0 378 328 26 5 chr5 42667416 42667605 -156962545 - L1M4 LINE L1 -1072 5074 4882 26 0 0 0 chr5 42667623 42667649 -156962501 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 42668340 42668362 -156961788 + AT_rich Low_complexity Low_complexity 1 22 0 217 0 61 0 chr5 42670205 42670238 -156959912 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1942 158 0 3 chr5 42670903 42671201 -156958949 - AluSx SINE Alu -14 298 2 6235 134 47 60 chr5 42672238 42672595 -156957555 + Tigger3b DNA MER2_type 1 361 -2667 1617 146 31 8 chr5 42672595 42672856 -156957294 + AluJo SINE Alu 33 299 -13 6235 134 47 60 chr5 42672856 42673067 -156957083 + Tigger3b DNA MER2_type 361 573 -2455 2281 75 10 7 chr5 42673067 42673373 -156956777 - AluSx SINE Alu -5 307 1 6235 134 47 60 chr5 42673373 42673768 -156956382 + Tigger3b DNA MER2_type 573 948 -2080 2364 67 7 0 chr5 42673768 42674067 -156956083 - AluY SINE Alu -10 301 1 6235 134 47 60 chr5 42674067 42674347 -156955803 + Tigger3b DNA MER2_type 948 1230 -1 206 309 0 85 chr5 42674464 42674558 -156955592 - MIR SINE MIR -157 105 20 2100 84 0 74 chr5 42675110 42675433 -156954717 - AluSq SINE Alu -14 299 1 2312 76 0 33 chr5 42675476 42675780 -156954370 - AluSg SINE Alu -14 296 3 26 0 0 0 chr5 42675902 42675928 -156954222 + AT_rich Low_complexity Low_complexity 1 26 0 2811 237 35 30 chr5 42676568 42677371 -156952779 + L1ME2 LINE L1 5348 6154 -10 319 260 95 85 chr5 42677431 42677631 -156952519 + L1MC4 LINE L1 7830 8031 -11 1945 102 0 0 chr5 42678152 42678406 -156951744 - AluSx SINE Alu -13 299 46 313 51 0 0 chr5 42679066 42679105 -156951045 + MADE1 DNA Mariner 8 46 -34 1109 244 153 11 chr5 42681192 42681706 -156948444 + MLT1E2 LTR MaLR 14 624 0 1937 88 51 11 chr5 42681910 42682183 -156947967 - AluSx SINE Alu -7 305 22 496 199 122 39 chr5 42683194 42683350 -156946800 - L1ME3A LINE L1 -71 6099 5931 240 247 11 22 chr5 42683386 42683475 -156946675 - L1M4 LINE L1 -1796 4350 4263 703 206 0 30 chr5 42683481 42683612 -156946538 - FRAM SINE Alu -30 146 20 261 255 69 0 chr5 42683741 42683843 -156946307 - L1MEc LINE L1 -4576 1820 1712 861 221 77 31 chr5 42683861 42684083 -156946067 - MLT1F LTR MaLR -54 488 257 394 285 94 40 chr5 42684291 42684642 -156945508 - L1MEc LINE L1 -5245 1151 782 1777 181 0 3 chr5 42684880 42685184 -156944966 + AluJb SINE Alu 1 303 -9 21 0 0 0 chr5 42686137 42686158 -156943992 + AT_rich Low_complexity Low_complexity 1 21 0 237 304 80 0 chr5 42686547 42686659 -156943491 - L1P LINE L1 -781 5365 5245 343 192 10 10 chr5 42687078 42687177 -156942973 + (TA)n Simple_repeat Simple_repeat 2 100 0 670 236 123 14 chr5 42687285 42687497 -156942653 - L1ME2 LINE L1 0 6164 5930 302 294 126 14 chr5 42687695 42687838 -156942312 - L1M4 LINE L1 -1900 4246 4088 2280 83 3 16 chr5 42687999 42688312 -156941838 + AluSc SINE Alu 1 309 0 1859 76 50 29 chr5 42689151 42689428 -156940722 - AluSc SINE Alu -26 283 1 1212 145 30 0 chr5 42689467 42689667 -156940483 + MER2 DNA MER2_type 1 206 -139 2386 77 0 3 chr5 42690017 42690314 -156939836 - AluSx SINE Alu -16 296 1 1590 159 107 20 chr5 42690373 42690718 -156939432 + THE1C LTR MaLR 1 375 0 13408 101 18 2 chr5 42690959 42692927 -156937223 - L1PA7 LINE L1 -1913 4233 2234 8115 80 26 2 chr5 42692927 42694811 -156935339 + L1PA7 LINE L1 4232 6151 -3 484 75 0 97 chr5 42694811 42695206 -156934944 + (TA)n Simple_repeat Simple_repeat 1 356 0 477 248 64 28 chr5 42696782 42696923 -156933227 + MIR3 SINE MIR 50 195 -13 197 241 74 0 chr5 42697500 42697554 -156932596 + MIR SINE MIR 41 98 -110 28 0 0 0 chr5 42698015 42698043 -156932107 + AT_rich Low_complexity Low_complexity 1 28 0 1568 139 51 83 chr5 42698046 42698219 -156931931 + MER46B DNA MER2_type 1 32 -2699 2267 64 0 27 chr5 42698219 42698515 -156931635 + AluY SINE Alu 1 288 -23 1568 139 51 83 chr5 42698515 42698714 -156931436 + MER46B DNA MER2_type 32 236 0 297 0 0 0 chr5 42698738 42698771 -156931379 + (A)n Simple_repeat Simple_repeat 1 33 0 1535 216 106 30 chr5 42699183 42699478 -156930672 + Charlie1b DNA MER1_type 2 343 -2418 2532 90 22 20 chr5 42699478 42699901 -156930249 + L1PB2 LINE L1 5740 6163 0 1535 216 106 30 chr5 42699901 42700039 -156930111 + Charlie1b DNA MER1_type 343 469 -54 28 48 0 0 chr5 42700987 42701029 -156929121 + AT_rich Low_complexity Low_complexity 1 42 0 234 333 33 17 chr5 42702151 42702271 -156927879 + L1MEc LINE L1 505 626 -5981 1301 137 0 5 chr5 42702614 42702804 -156927346 - AluSx SINE Alu -123 189 1 236 208 19 0 chr5 42702934 42702987 -156927163 + L1MEc LINE L1 900 953 -5473 2180 104 0 13 chr5 42703050 42703366 -156926784 + AluSx SINE Alu 1 312 0 384 288 91 59 chr5 42704592 42704868 -156925282 - L1MEc LINE L1 -5082 1663 1372 2197 101 0 19 chr5 42704868 42705186 -156924964 - AluSx SINE Alu 0 312 1 384 288 91 59 chr5 42705186 42705249 -156924901 - L1MEc LINE L1 -5373 1372 1313 236 208 19 0 chr5 42705249 42705302 -156924848 - L1MEc LINE L1 -4955 1090 1037 1266 136 0 11 chr5 42705432 42705623 -156924527 + AluSx SINE Alu 1 189 -123 234 333 33 17 chr5 42705967 42706087 -156924063 - L1MEc LINE L1 -5981 764 643 28 48 0 0 chr5 42707209 42707251 -156922899 + AT_rich Low_complexity Low_complexity 1 42 0 1535 216 106 30 chr5 42708199 42708337 -156921813 - Charlie1b DNA MER1_type -2292 469 343 189 0 0 0 chr5 42708337 42708358 -156921792 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2549 87 22 20 chr5 42708358 42708760 -156921390 - L1PB2 LINE L1 -9 6142 5740 1535 216 106 30 chr5 42708760 42709055 -156921095 - Charlie1b DNA MER1_type -2417 344 2 414 0 0 0 chr5 42709474 42709520 -156920630 + (T)n Simple_repeat Simple_repeat 1 46 0 1556 139 51 83 chr5 42709544 42709743 -156920407 - MER46B DNA MER2_type -2495 236 178 2237 68 0 27 chr5 42709743 42710039 -156920111 - AluY SINE Alu -23 288 1 1556 139 51 83 chr5 42710039 42710212 -156919938 - MER46B DNA MER2_type -2553 178 1 28 0 0 0 chr5 42710215 42710243 -156919907 + AT_rich Low_complexity Low_complexity 1 28 0 197 241 74 0 chr5 42710704 42710758 -156919392 - MIR SINE MIR -110 98 41 477 248 64 28 chr5 42711335 42711476 -156918674 - MIR3 SINE MIR -13 195 50 441 59 0 103 chr5 42713048 42713392 -156916758 + (TA)n Simple_repeat Simple_repeat 1 308 0 206 147 7 84 chr5 42713403 42713546 -156916604 + (TA)n Simple_repeat Simple_repeat 1 132 0 8131 78 19 3 chr5 42713546 42715430 -156914720 - L1PA7 LINE L1 -3 6151 4232 16024 46 17 3 chr5 42715430 42717590 -156912560 + L1P LINE L1 2234 4423 -1723 435 173 0 0 chr5 42717690 42717771 -156912379 - AluS SINE Alu -232 81 1 388 309 96 45 chr5 42717848 42718018 -156912132 + L1ME3 LINE L1 846 1006 -5390 2071 105 6 19 chr5 42718018 42718333 -156911817 + AluSx SINE Alu 1 311 -1 388 309 96 45 chr5 42718333 42718608 -156911542 + L1ME3 LINE L1 1006 1314 -5082 269 237 139 35 chr5 42718790 42718963 -156911187 + L1ME3 LINE L1 2030 2220 -4176 768 255 63 12 chr5 42719069 42719402 -156910748 + L1ME3 LINE L1 2213 2562 -3653 612 289 47 30 chr5 42719371 42719776 -156910374 + L1ME3 LINE L1 3480 3891 -2324 * 1944 242 142 44 chr5 42719785 42721680 -156908470 + L1ME3 LINE L1 4066 6156 -75 180 0 0 0 chr5 42721680 42721700 -156908450 + (TA)n Simple_repeat Simple_repeat 1 20 0 1944 242 142 44 chr5 42721700 42721751 -156908399 + L1ME3 LINE L1 6156 6201 -30 317 255 153 86 chr5 42723048 42723303 -156906847 - L1MDa LINE L1 -4174 2547 2276 651 283 106 72 chr5 42723393 42723746 -156906404 - L1MDa LINE L1 -4552 1988 1649 2237 89 0 23 chr5 42723746 42724048 -156906102 - AluSx SINE Alu -17 295 1 2372 81 3 0 chr5 42724058 42724353 -156905797 - AluSp SINE Alu -17 296 1 651 283 106 72 chr5 42724353 42724769 -156905381 - L1MDa LINE L1 -4899 1641 1298 528 93 0 0 chr5 42725947 42726022 -156904128 + (GGGGA)n Simple_repeat Simple_repeat 5 79 0 1901 163 62 19 chr5 42726381 42726755 -156903395 - MLT1B LTR MaLR 0 390 1 200 240 8 47 chr5 42726980 42727109 -156903041 + (TTATA)n Simple_repeat Simple_repeat 5 128 0 22 0 0 0 chr5 42727132 42727154 -156902996 + AT_rich Low_complexity Low_complexity 1 22 0 431 250 9 35 chr5 42727609 42727725 -156902425 - MIR SINE MIR -122 140 28 23 0 0 0 chr5 42728007 42728030 -156902120 + AT_rich Low_complexity Low_complexity 1 23 0 1597 134 64 55 chr5 42729216 42729635 -156900515 + THE1C LTR MaLR 1 375 0 10673 101 14 31 chr5 42729635 42731243 -156898907 + THE1C-int LTR MaLR 1 1580 0 1798 112 18 185 chr5 42731245 42731693 -156898457 + THE1C LTR MaLR 3 375 0 270 363 78 16 chr5 42732140 42732396 -156897754 + MLT1K LTR MaLR 281 552 -36 252 250 0 0 chr5 42733034 42733090 -156897060 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 1803 157 61 0 chr5 42733131 42733425 -156896725 + MER7A DNA MER2_type 1 310 -36 1151 200 5 14 chr5 42734675 42734895 -156895255 + MER20 DNA MER1_type 2 219 0 184 273 0 23 chr5 42735043 42735087 -156895063 - L2 LINE L2 -21 3251 3209 399 304 23 18 chr5 42735528 42735699 -156894451 + GA-rich Low_complexity Low_complexity 1 172 0 1127 184 61 19 chr5 42735984 42736294 -156893856 + MER33 DNA MER1_type 1 323 -1 440 236 19 19 chr5 42737110 42737216 -156892934 - MER5A DNA MER1_type -80 109 4 13554 132 50 20 chr5 42737619 42739945 -156890205 + Tigger1 DNA MER2_type 24 2418 0 1553 160 45 120 chr5 42740614 42741040 -156889110 + MSTD LTR MaLR 1 394 -2 1939 161 31 6 chr5 42741159 42741508 -156888642 + MER47A DNA MER2_type 2 359 -7 251 276 14 2 chr5 42741511 42741611 -156888539 + L1M4c LINE L1 1242 1383 -5045 418 287 34 51 chr5 42742146 42742439 -156887711 + L1M4c LINE L1 1358 1645 -4783 247 269 62 36 chr5 42742465 42742658 -156887492 + L1MCa LINE L1 1407 1604 -4822 289 179 18 18 chr5 42742677 42742733 -156887417 - MER58 DNA MER1_type -159 56 1 2282 138 12 3 chr5 42743177 42743511 -156886639 - MER1B DNA MER1_type -2 337 1 465 238 39 61 chr5 42744104 42744285 -156885865 - L2 LINE L2 -4 3309 3133 280 230 27 14 chr5 42744630 42744704 -156885446 - MER58B DNA MER1_type -37 304 230 1542 202 22 28 chr5 42744735 42745096 -156885054 - MLT1A1 LTR MaLR -6 359 1 924 168 0 46 chr5 42745413 42745609 -156884541 + AluJb SINE Alu 129 312 0 2277 91 3 3 chr5 42745950 42746247 -156883903 + AluSp SINE Alu 1 297 -16 21 0 0 0 chr5 42746705 42746726 -156883424 + AT_rich Low_complexity Low_complexity 1 21 0 1795 221 101 21 chr5 42747051 42747397 -156882753 + L1ME2 LINE L1 5163 5480 -684 2837 10 0 0 chr5 42747397 42747706 -156882444 - AluYa5 SINE Alu -2 309 1 1795 221 101 21 chr5 42747706 42747972 -156882178 + L1ME2 LINE L1 5480 5821 -343 897 163 0 0 chr5 42747975 42748122 -156882028 + FRAM SINE Alu 1 146 -30 821 221 88 32 chr5 42748141 42748461 -156881689 + L1ME2 LINE L1 5811 6165 -9 359 335 95 20 chr5 42748878 42749078 -156881072 + MIR SINE MIR 48 262 0 322 272 98 11 chr5 42749864 42749956 -156880194 + L2 LINE L2 3199 3298 -15 464 318 150 13 chr5 42751290 42751523 -156878627 - L3 LINE CR1 -83 1494 1230 1236 218 23 0 chr5 42751697 42751963 -156878187 + L1MCa LINE L1 20 291 -6135 288 314 48 0 chr5 42752238 42752343 -156877807 - MER94 DNA DNA -9 125 16 2111 113 0 30 chr5 42752484 42752785 -156877365 - AluSg SINE Alu -18 292 1 943 175 35 5 chr5 42752871 42753071 -156877079 + L1PA16 LINE L1 5958 6163 -3 34353 46 2 2 chr5 42753553 42757814 -156872336 + L1P LINE L1 1 4264 -1882 20945 33 7 78 chr5 42757914 42761309 -156868841 + L1PA4 LINE L1 2815 6152 -3 34 96 0 0 chr5 42761321 42761425 -156868725 + AT_rich Low_complexity Low_complexity 1 104 0 29 28 0 0 chr5 42761511 42761547 -156868603 + AT_rich Low_complexity Low_complexity 1 36 0 377 281 33 25 chr5 42761831 42761952 -156868198 + L2 LINE L2 3187 3308 -5 218 360 68 14 chr5 42762393 42762540 -156867610 - L2 LINE L2 -792 2522 2368 861 145 0 7 chr5 42762658 42762796 -156867354 + FRAM SINE Alu 33 169 -7 192 277 0 31 chr5 42762909 42762974 -156867176 - MER5A DNA MER1_type -92 97 35 * 247 237 17 17 chr5 42762931 42762990 -156867160 + MER5A DNA MER1_type 124 182 -7 546 233 83 47 chr5 42763183 42763376 -156866774 - MIR SINE MIR -44 218 19 305 240 0 83 chr5 42763514 42763610 -156866540 + L2 LINE L2 3225 3312 -1 247 111 89 0 chr5 42763679 42763724 -156866426 + L1MA6 LINE L1 5441 5489 -808 429 152 0 0 chr5 42763725 42763791 -156866359 + AluJ/FRAM SINE Alu 221 286 -26 4006 130 61 38 chr5 42763792 42764483 -156865667 + L1MA6 LINE L1 5476 6189 -111 1914 137 158 21 chr5 42764483 42764856 -156865294 + MSTC LTR MaLR 1 424 -4 4006 130 61 38 chr5 42764856 42764971 -156865179 + L1MA6 LINE L1 6189 6300 0 366 200 154 9 chr5 42764998 42765108 -156865042 + L1ME3A LINE L1 6045 6170 0 324 0 0 0 chr5 42766857 42766893 -156863257 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1502 178 6 55 chr5 42766896 42767222 -156862928 + AluJo SINE Alu 1 310 -2 2240 109 15 18 chr5 42768007 42768345 -156861805 - MER1B DNA MER1_type 0 337 1 331 225 95 122 chr5 42768420 42768642 -156861508 - MER46C DNA MER2_type -122 216 1 373 272 48 0 chr5 42768933 42769036 -156861114 + MER5A DNA MER1_type 4 111 -78 2353 190 55 11 chr5 42769075 42769578 -156860572 + MER68 LTR ERV1 1 603 -2 322 290 141 75 chr5 42769647 42769981 -156860169 + L1MEd LINE L1 260 615 -5504 769 271 41 23 chr5 42770199 42770417 -156859733 - MER58A DNA MER1_type -2 222 1 553 246 71 54 chr5 42770535 42770885 -156859265 + L1MEd LINE L1 902 1257 -4862 215 106 43 0 chr5 42770998 42771045 -156859105 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 730 205 36 98 chr5 42771094 42771155 -156858995 + L1MC5 LINE L1 7603 7666 -295 2055 133 7 3 chr5 42771155 42771464 -156858686 - AluSx SINE Alu -2 310 1 730 205 36 98 chr5 42771464 42771738 -156858412 + L1MC5 LINE L1 7666 7917 -44 225 154 0 0 chr5 42771858 42771897 -156858253 + (CA)n Simple_repeat Simple_repeat 1 39 0 360 283 17 23 chr5 42771901 42772074 -156858076 + L1ME3A LINE L1 5603 5774 -396 250 360 24 0 chr5 42772120 42772245 -156857905 - MIR SINE MIR -31 231 104 2101 97 7 20 chr5 42772295 42772594 -156857556 + AluSx SINE Alu 1 295 -17 1405 230 42 3 chr5 42772716 42772920 -156857230 + Tigger5 DNA MER2_type 7 227 -2096 1598 161 18 26 chr5 42772920 42773193 -156856957 + AluJo SINE Alu 1 271 -41 1405 230 42 3 chr5 42773193 42773275 -156856875 + Tigger5 DNA MER2_type 227 304 -2019 249 248 144 32 chr5 42774138 42774263 -156855887 + MER117 DNA MER1_type 6 144 -53 221 180 200 0 chr5 42774353 42774403 -156855747 + L2 LINE L2 3251 3310 -3 2539 30 7 3 chr5 42774439 42774735 -156855415 + AluY SINE Alu 1 297 -14 1433 88 0 5 chr5 42774735 42774927 -156855223 + AluSg/x SINE Alu 109 299 -13 24 0 0 0 chr5 42775240 42775264 -156854886 + AT_rich Low_complexity Low_complexity 1 24 0 335 288 208 15 chr5 42775919 42776183 -156853967 + L2 LINE L2 2661 2975 -339 434 280 93 33 chr5 42776246 42776460 -156853690 + L2 LINE L2 3080 3306 -7 469 355 150 15 chr5 42776593 42776999 -156853151 - L2 LINE L2 -626 2688 2228 942 274 133 39 chr5 42777000 42777182 -156852968 - L2 LINE L2 -2 3311 3147 1782 160 3 28 chr5 42777182 42777501 -156852649 + AluJb SINE Alu 2 312 0 942 274 133 39 chr5 42777501 42777778 -156852372 - L2 LINE L2 -166 3147 2809 185 369 0 0 chr5 42777845 42777910 -156852240 + L2 LINE L2 3208 3272 0 278 152 0 0 chr5 42780048 42780094 -156850056 - L1ME3 LINE L1 -197 5965 5920 * 991 194 37 40 chr5 42780090 42780363 -156849787 + L1ME3A LINE L1 5894 6165 -5 315 299 184 25 chr5 42780658 42780859 -156849291 - MIR SINE MIR -29 233 1 322 303 78 37 chr5 42781660 42781878 -156848272 + MIR SINE MIR 9 235 -27 235 280 0 0 chr5 42781941 42781991 -156848159 + L2 LINE L2 3257 3306 -7 372 312 107 51 chr5 42782087 42782321 -156847829 + L3 LINE CR1 1308 1554 -23 21 0 0 0 chr5 42783341 42783362 -156846788 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 42784574 42784595 -156845555 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 42784797 42784818 -156845332 + AT_rich Low_complexity Low_complexity 1 21 0 270 146 21 0 chr5 42785733 42785781 -156844369 - MIR SINE MIR -120 142 94 2094 168 75 0 chr5 42785880 42786278 -156843872 - MSTA LTR MaLR 0 428 1 9739 157 12 5 chr5 42786278 42787917 -156842233 - MSTA-int LTR MaLR 0 1651 1 2091 169 96 0 chr5 42787917 42788301 -156841849 - MSTA LTR MaLR 0 428 8 203 277 239 23 chr5 42788543 42788673 -156841477 + L2 LINE L2 2323 2480 -834 209 351 59 86 chr5 42788760 42789099 -156841051 - L2 LINE L2 -52 3220 2891 189 248 147 115 chr5 42789746 42789903 -156840247 + MIR SINE MIR 69 230 -32 202 323 31 55 chr5 42790522 42790649 -156839501 + L2 LINE L2 2561 2684 -630 2756 10 0 13 chr5 42791014 42791323 -156838827 + AluYb8 SINE Alu 1 305 -13 29 70 0 0 chr5 42791434 42791491 -156838659 + AT_rich Low_complexity Low_complexity 1 57 0 523 322 58 33 chr5 42792298 42792540 -156837610 - MIR SINE MIR -6 256 9 357 208 76 145 chr5 42794795 42795098 -156835052 + L1M2 LINE L1 674 955 -5894 36 62 0 0 chr5 42795270 42795334 -156834816 + GC_rich Low_complexity Low_complexity 1 64 0 612 0 0 0 chr5 42796115 42796183 -156833967 + (CA)n Simple_repeat Simple_repeat 2 69 0 335 336 38 30 chr5 42796271 42796402 -156833748 + L2 LINE L2 3182 3313 0 229 268 148 55 chr5 42796469 42796853 -156833297 + L1ME4a LINE L1 5694 6113 -8 189 347 40 32 chr5 42797284 42797408 -156832742 - L3b LINE CR1 -172 1411 1287 283 287 0 21 chr5 42798651 42798745 -156831405 + L1ME4a LINE L1 5963 6054 -67 2144 238 135 51 chr5 42799050 42800362 -156829788 - Charlie7 DNA MER1_type -271 2341 701 1341 225 39 3 chr5 42800362 42800479 -156829671 + AluJo SINE Alu 5 116 -196 213 39 0 0 chr5 42800479 42800505 -156829645 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1341 225 39 3 chr5 42800505 42800672 -156829478 + AluJo SINE Alu 116 299 -13 2144 238 135 51 chr5 42800672 42801320 -156828830 - Charlie7 DNA MER1_type -1911 701 109 228 200 0 0 chr5 42801322 42801372 -156828778 + T-rich Low_complexity Low_complexity 1 50 0 586 274 79 27 chr5 42801567 42801859 -156828291 + L1MEd LINE L1 522 828 -5291 265 302 79 101 chr5 42801895 42802733 -156827417 + L1ME1 LINE L1 45 845 -5551 2307 107 0 0 chr5 42802733 42803032 -156827118 + AluSg SINE Alu 1 299 -11 265 302 79 101 chr5 42803032 42803485 -156826665 + L1ME1 LINE L1 845 1307 -5089 * 608 265 17 9 chr5 42803464 42803694 -156826456 + L1ME1 LINE L1 3280 3511 -2704 2258 244 45 13 chr5 42803697 42803867 -156826283 + L1ME1 LINE L1 4686 4849 -1386 2108 136 33 14 chr5 42803867 42804235 -156825915 - THE1C LTR MaLR 0 375 1 2258 244 45 13 chr5 42804235 42805267 -156824883 + L1ME1 LINE L1 4849 5921 -314 1341 97 0 0 chr5 42805267 42805442 -156824708 - AluSp SINE Alu -5 308 134 2291 94 0 19 chr5 42805442 42805749 -156824401 - AluSg SINE Alu -9 301 1 1188 233 28 6 chr5 42805750 42806068 -156824082 + L1ME1 LINE L1 5908 6232 -3 583 323 84 37 chr5 42806134 42806537 -156823613 + L1MEd LINE L1 1009 1430 -4701 7523 207 122 5 chr5 42806544 42808129 -156822021 + L1MA4A LINE L1 2 1771 -5078 * 13985 170 26 22 chr5 42808125 42808395 -156821755 + L1MA4A LINE L1 2887 3154 -3851 680 207 0 8 chr5 42808395 42808516 -156821634 + FLAM_C SINE Alu 1 120 -13 13985 170 26 22 chr5 42808516 42812341 -156817809 + L1MA4A LINE L1 3154 6999 -6 1986 142 67 20 chr5 42812840 42813186 -156816964 + THE1C LTR MaLR 14 375 0 628 302 90 14 chr5 42813195 42813407 -156816743 - MLT2E LTR ERVL -365 263 36 3206 179 13 4 chr5 42813410 42813967 -156816183 - MER68 LTR ERV1 0 562 1 2445 70 3 0 chr5 42814976 42815277 -156814873 + AluY SINE Alu 1 302 -9 1211 273 64 67 chr5 42815380 42816259 -156813891 + L1MEd LINE L1 40 965 -5154 275 134 16 45 chr5 42816316 42816382 -156813768 - Alu SINE Alu -13 289 246 937 212 47 0 chr5 42816414 42816607 -156813543 + AluJo SINE Alu 1 202 -110 333 237 26 9 chr5 42816708 42816822 -156813328 + L1M4 LINE L1 4996 5111 -1035 331 276 14 28 chr5 42816878 42817023 -156813127 + L1M4 LINE L1 5625 5767 -417 2274 112 0 3 chr5 42817114 42817426 -156812724 + AluSx SINE Alu 1 311 -1 24 0 0 0 chr5 42817716 42817740 -156812410 + AT_rich Low_complexity Low_complexity 1 24 0 588 266 47 34 chr5 42817776 42818009 -156812141 + MARNA DNA Mariner 183 418 -168 3839 130 12 20 chr5 42818058 42818673 -156811477 - L1MA4A LINE L1 -6 6297 5686 1581 152 56 26 chr5 42818673 42818976 -156811174 - AluJo SINE Alu 0 312 1 3839 130 12 20 chr5 42818976 42818999 -156811151 - L1MA4A LINE L1 -617 5686 5664 206 230 0 61 chr5 42819175 42819323 -156810827 + (TTAAA)n Simple_repeat Simple_repeat 3 141 0 2313 88 0 16 chr5 42819625 42819931 -156810219 - AluSg SINE Alu -9 301 1 1135 178 85 27 chr5 42819942 42820186 -156809964 + LTR16A1 LTR ERVL 185 446 -11 1213 181 30 124 chr5 42820186 42820589 -156809561 + MLT1A1 LTR MaLR 1 365 0 1135 178 85 27 chr5 42820589 42820602 -156809548 + LTR16A1 LTR ERVL 446 457 0 599 276 149 69 chr5 42821558 42821755 -156808395 + Charlie8 DNA MER1_type 1 181 -2236 1027 272 78 36 chr5 42821755 42822252 -156807898 - LTR33 LTR ERVL -3 518 1 599 276 149 69 chr5 42822252 42822518 -156807632 + Charlie8 DNA MER1_type 181 501 -1916 1792 141 11 4 chr5 42822551 42822828 -156807322 + AluJb SINE Alu 11 289 -23 2324 86 0 0 chr5 42822880 42823172 -156806978 - AluY SINE Alu -19 292 1 383 322 112 19 chr5 42823730 42823988 -156806162 + LTR16A LTR ERVL 148 429 -21 377 298 61 0 chr5 42824009 42824140 -156806010 + L2 LINE L2 1840 1978 -1336 21 0 0 0 chr5 42824211 42824232 -156805918 + AT_rich Low_complexity Low_complexity 1 21 0 225 294 73 51 chr5 42824331 42824508 -156805642 - L2 LINE L2 -831 2483 2303 277 370 29 7 chr5 42824599 42824737 -156805413 - MER5B DNA MER1_type -4 174 34 1061 285 79 36 chr5 42824740 42825185 -156804965 - LTR16B LTR ERVL 0 464 1 242 293 84 37 chr5 42825215 42825406 -156804744 - L2 LINE L2 -1550 1764 1565 1486 192 42 3 chr5 42825764 42826051 -156804099 - AluJb SINE Alu -14 298 1 244 271 0 0 chr5 42826052 42826100 -156804050 - L2 LINE L2 -1897 1417 1370 24 0 0 0 chr5 42826162 42826186 -156803964 + AT_rich Low_complexity Low_complexity 1 24 0 250 264 120 35 chr5 42827001 42827115 -156803035 - MIR SINE MIR -23 185 57 23 0 0 0 chr5 42829103 42829126 -156801024 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 42829559 42829583 -156800567 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr5 42831101 42831134 -156799016 + AT_rich Low_complexity Low_complexity 1 33 0 2084 135 3 0 chr5 42835926 42836223 -156793927 - AluSx SINE Alu -14 298 1 190 378 18 18 chr5 42836354 42836465 -156793685 - L2 LINE L2 -605 2709 2599 652 282 125 35 chr5 42836721 42837040 -156793110 + LTR16C LTR ERVL 75 422 -69 256 213 49 0 chr5 42837578 42837639 -156792511 + MER5A DNA MER1_type 18 81 -108 1819 164 0 19 chr5 42838720 42839031 -156791119 - AluJo SINE Alu -7 305 1 348 348 33 17 chr5 42839273 42839454 -156790696 - MER5A DNA MER1_type 0 189 6 29 28 0 0 chr5 42840148 42840184 -156789966 + AT_rich Low_complexity Low_complexity 1 36 0 249 33 0 0 chr5 42841049 42841079 -156789071 + (TG)n Simple_repeat Simple_repeat 1 30 0 230 234 0 0 chr5 42841079 42841126 -156789024 + GA-rich Low_complexity Low_complexity 2 48 0 480 244 15 134 chr5 42841254 42841455 -156788695 - MER5B DNA MER1_type 0 178 2 27 29 0 0 chr5 42841509 42841543 -156788607 + AT_rich Low_complexity Low_complexity 1 34 0 27 29 0 0 chr5 42841788 42841822 -156788328 + AT_rich Low_complexity Low_complexity 1 34 0 198 0 0 0 chr5 42842008 42842030 -156788120 + (A)n Simple_repeat Simple_repeat 1 22 0 246 333 26 0 chr5 42844934 42845012 -156785138 - MIR SINE MIR -152 110 31 438 53 0 0 chr5 42845740 42845797 -156784353 + (CA)n Simple_repeat Simple_repeat 1 57 0 245 309 0 0 chr5 42846496 42846590 -156783560 + (TG)n Simple_repeat Simple_repeat 1 94 0 1994 151 3 7 chr5 42847246 42847551 -156782599 + AluJo SINE Alu 3 306 -6 2265 109 3 3 chr5 42847608 42847919 -156782231 + AluSp SINE Alu 1 311 -2 29 47 0 0 chr5 42847979 42848022 -156782128 + AT_rich Low_complexity Low_complexity 1 43 0 512 59 0 0 chr5 42848237 42848305 -156781845 + Alu SINE Alu 236 303 -7 329 322 0 26 chr5 42850417 42850569 -156779581 + GA-rich Low_complexity Low_complexity 1 148 0 319 222 20 30 chr5 42852699 42852798 -156777352 - HsTC2 DNA Tc2 -6 1892 1795 21 0 0 0 chr5 42852821 42852842 -156777308 + AT_rich Low_complexity Low_complexity 1 21 0 2257 100 0 0 chr5 42853074 42853373 -156776777 - AluY SINE Alu -12 299 1 451 276 55 7 chr5 42853562 42853707 -156776443 - MIR SINE MIR -74 188 37 29 0 0 0 chr5 42854399 42854428 -156775722 + AT_rich Low_complexity Low_complexity 1 29 0 201 238 0 29 chr5 42854610 42854715 -156775435 + T-rich Low_complexity Low_complexity 3 104 0 22 0 0 0 chr5 42855721 42855743 -156774407 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 42856265 42856287 -156773863 + AT_rich Low_complexity Low_complexity 1 22 0 340 274 85 38 chr5 42856759 42857490 -156772660 + L1ME LINE L1 4754 5514 -656 402 149 0 0 chr5 42858160 42858227 -156771923 + AluSx SINE Alu 61 127 -175 478 143 13 0 chr5 42858227 42858304 -156771846 - MADE1 DNA Mariner 0 80 3 1215 146 0 6 chr5 42858304 42858482 -156771668 + AluSx SINE Alu 124 300 -12 539 371 91 48 chr5 42858525 42860191 -156769959 + L2 LINE L2 990 2727 -587 24 53 0 0 chr5 42860443 42860481 -156769669 + AT_rich Low_complexity Low_complexity 1 38 0 1441 208 144 49 chr5 42860803 42861124 -156769026 + L1MC5 LINE L1 7191 7480 -481 2309 103 3 0 chr5 42861124 42861434 -156768716 + AluSq SINE Alu 1 311 -2 1441 208 144 49 chr5 42861434 42861771 -156768379 + L1MC5 LINE L1 7480 7912 -49 213 245 20 0 chr5 42862269 42862318 -156767832 + L2 LINE L2 2765 2814 -500 2259 115 3 6 chr5 42862501 42862814 -156767336 - AluSx SINE Alu 0 312 1 24 53 0 0 chr5 42863416 42863454 -156766696 + AT_rich Low_complexity Low_complexity 1 38 0 1062 163 6 6 chr5 42863990 42864168 -156765982 - AluJb SINE Alu -9 303 126 390 21 0 0 chr5 42864176 42864223 -156765927 + (TG)n Simple_repeat Simple_repeat 2 48 0 2287 39 89 0 chr5 42864422 42864703 -156765447 - AluY SINE Alu -4 307 2 505 52 26 0 chr5 42864856 42864933 -156765217 + (TA)n Simple_repeat Simple_repeat 1 79 0 592 192 0 25 chr5 42864933 42865053 -156765097 - AluJb SINE Alu -191 121 5 333 0 0 0 chr5 42865112 42865149 -156765001 + (T)n Simple_repeat Simple_repeat 1 37 0 1597 229 234 3 chr5 42866111 42866766 -156763384 + L2 LINE L2 1567 2372 -942 2113 173 60 58 chr5 42866795 42867293 -156762857 + LTR54 LTR ERV1 1 499 -11 1331 288 75 57 chr5 42867341 42868022 -156762128 + L2 LINE L2 2409 3181 -132 2019 149 0 0 chr5 42868022 42868317 -156761833 - AluJo SINE Alu -17 295 1 1331 288 75 57 chr5 42868317 42868450 -156761700 + L2 LINE L2 3181 3310 -3 537 253 148 48 chr5 42869587 42869816 -156760334 + MIR SINE MIR 7 258 -4 222 254 0 0 chr5 42869819 42869878 -156760272 + (TGG)n Simple_repeat Simple_repeat 3 61 0 748 167 126 75 chr5 42870386 42870513 -156759637 - MER63 DNA MER1_type -810 251 132 1633 177 0 40 chr5 42870513 42870813 -156759337 - AluJo SINE Alu -24 288 1 748 167 126 75 chr5 42870813 42870924 -156759226 - MER63 DNA MER1_type -929 132 1 1498 107 0 0 chr5 42871226 42871431 -156758719 - AluSg/x SINE Alu -4 308 104 1106 147 0 6 chr5 42871449 42871619 -156758531 - AluSg SINE Alu -141 169 1 21 71 0 0 chr5 42872426 42872468 -156757682 + AT_rich Low_complexity Low_complexity 1 42 0 378 304 29 0 chr5 42873062 42873200 -156756950 + MLT1K LTR MaLR 291 432 -156 231 304 0 38 chr5 42873786 42873865 -156756285 - MIR SINE MIR -154 108 33 601 245 60 27 chr5 42875586 42875807 -156754343 + MIR SINE MIR 31 257 -5 190 284 86 0 chr5 42876223 42876304 -156753846 + L2 LINE L2 1327 1414 -1900 215 207 0 69 chr5 42876498 42876556 -156753594 - L2 LINE L2 -1 3271 3218 263 333 14 42 chr5 42876586 42876730 -156753420 + L2 LINE L2 1671 1810 -1504 247 333 5 0 chr5 42876819 42876901 -156753249 + MIR SINE MIR 60 143 -65 317 366 24 30 chr5 42877237 42877441 -156752709 + MIR SINE MIR 7 210 -52 22 0 0 0 chr5 42877792 42877814 -156752336 + AT_rich Low_complexity Low_complexity 1 22 0 358 278 30 35 chr5 42878174 42878372 -156751778 - L1MC4a LINE L1 -1878 5930 5734 2183 194 68 20 chr5 42878384 42878945 -156751205 - L1MB8 LINE L1 -17 6161 5574 369 281 107 48 chr5 42878914 42879094 -156751056 - L1MC4a LINE L1 -2037 5771 5603 * 2311 63 14 3 chr5 42879094 42879381 -156750769 + AluSc SINE Alu 1 290 -19 369 281 107 48 chr5 42879381 42879592 -156750558 - L1MC4a LINE L1 -2205 5603 5357 289 273 189 54 chr5 42880846 42881106 -156749044 - MER102b DNA MER1_type -9 332 38 1912 146 37 0 chr5 42881110 42881404 -156748746 - AluSq SINE Alu -8 305 1 4587 162 27 25 chr5 42881816 42882843 -156747307 + L1PB4 LINE L1 4628 5652 -504 2201 118 7 0 chr5 42882843 42883149 -156747001 + AluSq SINE Alu 1 308 -5 4587 162 27 25 chr5 42883149 42883656 -156746494 + L1PB4 LINE L1 5652 6156 0 521 93 40 0 chr5 42883736 42883811 -156746339 + MADE1 DNA Mariner 3 80 0 261 57 0 0 chr5 42883944 42883979 -156746171 + (TC)n Simple_repeat Simple_repeat 2 36 0 1187 84 0 0 chr5 42886250 42886393 -156743757 + AluSq/x SINE Alu 1 143 -170 720 342 78 33 chr5 42887149 42887635 -156742515 + L2 LINE L2 2470 2977 -337 2047 123 14 7 chr5 42887693 42887986 -156742164 + AluSx SINE Alu 1 295 -17 1199 169 0 0 chr5 42888036 42888225 -156741925 + MER5A DNA MER1_type 1 189 0 2238 116 0 0 chr5 42888851 42889145 -156741005 + AluSx SINE Alu 1 294 -18 5230 167 25 9 chr5 42889151 42890976 -156739174 - L1PA16 LINE L1 -9 6157 4313 320 270 34 81 chr5 42891245 42891393 -156738757 - MIR3 SINE MIR -58 150 10 2415 100 3 0 chr5 42892826 42893137 -156737013 - AluSx SINE Alu 0 312 1 403 307 100 7 chr5 42894043 42894193 -156735957 - MIR3 SINE MIR -6 202 39 345 299 83 7 chr5 42894820 42894964 -156735186 - MER103 DNA DNA -1 165 11 190 300 0 0 chr5 42895041 42895091 -156735059 - MIR SINE MIR -10 252 203 308 296 40 32 chr5 42895135 42895260 -156734890 + MIR SINE MIR 27 152 -110 826 243 53 28 chr5 42895744 42895991 -156734159 - MIR SINE MIR -1 261 9 1063 106 0 0 chr5 42896221 42896363 -156733787 - AluSx SINE Alu 0 310 169 681 140 0 0 chr5 42896366 42896466 -156733684 - AluSx SINE Alu -213 100 1 467 332 24 100 chr5 42896469 42896849 -156733301 + L2 LINE L2 2906 3256 -16 246 346 44 44 chr5 42897674 42897810 -156732340 - L2 LINE L2 0 3272 3137 737 174 55 101 chr5 42897910 42898129 -156732021 + MER3 DNA MER1_type 1 209 0 532 330 215 20 chr5 42898236 42898562 -156731588 + L2 LINE L2 2261 2522 -792 726 168 0 0 chr5 42898562 42898699 -156731451 - L1MB1 LINE L1 0 6168 6032 532 330 215 20 chr5 42898699 42898920 -156731230 + L2 LINE L2 2522 2915 -399 633 61 0 0 chr5 42898957 42899039 -156731111 + (TG)n Simple_repeat Simple_repeat 1 82 0 349 22 0 0 chr5 42899487 42899532 -156730618 + L1ME LINE L1 5134 5178 -968 584 199 23 0 chr5 42899547 42899678 -156730472 + L1MA10 LINE L1 6191 6324 -10 1033 150 12 0 chr5 42899717 42899884 -156730266 - AluJ SINE Alu -16 296 128 550 190 41 34 chr5 42899920 42900221 -156729929 + L1ME LINE L1 5189 5492 -678 * 1275 164 29 36 chr5 42900194 42900362 -156729788 + L1MA9 LINE L1 5884 6051 -261 1890 116 60 28 chr5 42900362 42900646 -156729504 + AluSx SINE Alu 1 293 -19 1275 164 29 36 chr5 42900646 42900752 -156729398 + L1MA9 LINE L1 6051 6156 -156 835 128 0 8 chr5 42900916 42901041 -156729109 - AluJ SINE Alu -188 124 1 251 331 105 0 chr5 42901204 42901328 -156728822 - L2 LINE L2 -2823 491 355 1693 164 35 3 chr5 42901669 42901955 -156728195 - AluJo SINE Alu -17 295 1 27 0 0 0 chr5 42902252 42902279 -156727871 + AT_rich Low_complexity Low_complexity 1 27 0 579 311 164 39 chr5 42902441 42903311 -156726839 + L2 LINE L2 515 1493 -1821 641 188 43 0 chr5 42903359 42903497 -156726653 + MLT1D LTR MaLR 10 153 -352 16378 185 65 28 chr5 42903604 42907493 -156722657 + L1P LINE L1 826 4859 -1287 14052 66 3 6 chr5 42912810 42914819 -156715331 + L1P LINE L1 819 2822 -3324 21 36 0 0 chr5 42917168 42917196 -156712954 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5 42917566 42917588 -156712562 + AT_rich Low_complexity Low_complexity 1 22 0 249 284 0 0 chr5 42923444 42923518 -156706632 + T-rich Low_complexity Low_complexity 2 75 0 32 67 0 0 chr5 42926611 42926671 -156703479 + AT_rich Low_complexity Low_complexity 1 60 0 23 33 0 0 chr5 42926795 42926825 -156703325 + AT_rich Low_complexity Low_complexity 1 30 0 221 231 0 31 chr5 42929729 42929794 -156700356 + (TA)n Simple_repeat Simple_repeat 2 64 0 31 76 0 0 chr5 42929860 42929926 -156700224 + AT_rich Low_complexity Low_complexity 1 66 0 281 278 89 58 chr5 42930431 42930622 -156699528 - L2 LINE L2 0 3313 3117 441 210 10 0 chr5 42931536 42931636 -156698514 + L1MA8 LINE L1 5990 6090 -201 238 0 81 0 chr5 42931848 42931885 -156698265 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 280 285 70 50 chr5 42932640 42932942 -156697208 + L1MEd LINE L1 904 1211 -4908 334 295 0 18 chr5 42933134 42933300 -156696850 + L1MCa LINE L1 1025 1187 -5239 3064 148 16 63 chr5 42933647 42934264 -156695886 - L1PB4 LINE L1 -2 6154 5567 697 232 0 0 chr5 42934264 42934445 -156695705 + L1P LINE L1 4977 5157 -989 26 30 0 0 chr5 42934717 42934750 -156695400 + AT_rich Low_complexity Low_complexity 1 33 0 581 315 73 76 chr5 42934953 42935490 -156694660 - L1MEd LINE L1 -5050 1069 535 244 250 0 0 chr5 42936018 42936074 -156694076 - MER5B DNA MER1_type -121 57 2 22 0 0 0 chr5 42936578 42936600 -156693550 + AT_rich Low_complexity Low_complexity 1 22 0 381 207 9 20 chr5 42937014 42937125 -156693025 + L1MA4A LINE L1 5976 6102 -201 216 255 0 0 chr5 42937344 42937395 -156692755 + GA-rich Low_complexity Low_complexity 2 52 0 25 51 0 0 chr5 42937591 42937630 -156692520 + AT_rich Low_complexity Low_complexity 1 39 0 807 154 58 19 chr5 42938768 42938924 -156691226 + THE1C LTR MaLR 1 162 -213 695 183 9 18 chr5 42939391 42939619 -156690531 + GA-rich Low_complexity Low_complexity 1 225 0 854 88 0 0 chr5 42940049 42940163 -156689987 - AluSp SINE Alu -30 283 170 1104 83 0 0 chr5 42940163 42940295 -156689855 - AluSp SINE Alu -181 132 1 372 303 0 80 chr5 42940773 42940961 -156689189 - MER5A DNA MER1_type -16 173 1 22 0 0 0 chr5 42941118 42941140 -156689010 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr5 42941895 42941940 -156688210 + AT_rich Low_complexity Low_complexity 1 45 0 595 137 0 17 chr5 42942534 42942651 -156687499 + (TA)n Simple_repeat Simple_repeat 2 116 0 2075 94 0 0 chr5 42943185 42943452 -156686698 + AluSc SINE Alu 35 301 -8 234 0 0 0 chr5 42943646 42943672 -156686478 + (T)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr5 42943767 42943788 -156686362 + AT_rich Low_complexity Low_complexity 1 21 0 629 286 42 9 chr5 42943809 42944022 -156686128 - MIR SINE MIR -26 236 17 21 57 0 0 chr5 42944846 42944881 -156685269 + AT_rich Low_complexity Low_complexity 1 35 0 203 269 0 0 chr5 42944942 42944994 -156685156 + A-rich Low_complexity Low_complexity 3 54 0 2188 83 45 3 chr5 42945548 42945837 -156684313 - AluSq SINE Alu -9 304 4 399 270 26 26 chr5 42945845 42945960 -156684190 + MER5A DNA MER1_type 1 115 -74 216 0 0 0 chr5 42947776 42947800 -156682350 + (TG)n Simple_repeat Simple_repeat 1 24 0 529 209 70 6 chr5 42951041 42951199 -156678951 + HAL1b LINE L1 281 448 -900 1877 171 10 16 chr5 42951244 42951553 -156678597 + AluJo SINE Alu 1 307 -5 327 49 0 0 chr5 42951553 42951594 -156678556 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 2135 96 51 0 chr5 42953206 42953499 -156676651 - AluSx SINE Alu -4 308 1 182 234 141 0 chr5 42953584 42953648 -156676502 - L2 LINE L2 -82 3231 3159 375 281 231 5 chr5 42953778 42953981 -156676169 + MIR SINE MIR 14 262 0 351 328 94 16 chr5 42955106 42955298 -156674852 - MIR SINE MIR -27 235 29 201 245 29 29 chr5 42955485 42955519 -156674631 + (CATATA)n Simple_repeat Simple_repeat 1 34 -68 1716 156 126 3 chr5 42955519 42955845 -156674305 + MER47A DNA MER2_type 1 366 0 201 245 29 29 chr5 42955845 42955912 -156674238 + (CATATA)n Simple_repeat Simple_repeat 33 102 0 180 77 0 0 chr5 42956086 42956112 -156674038 + (TATATG)n Simple_repeat Simple_repeat 2 27 0 32 0 0 0 chr5 42956112 42956144 -156674006 + AT_rich Low_complexity Low_complexity 1 32 0 246 227 174 45 chr5 42956416 42956548 -156673602 + L1MC/D LINE L1 5676 5824 -1984 1197 154 48 0 chr5 42958232 42958440 -156671710 - MER20 DNA MER1_type -1 218 1 248 339 142 0 chr5 42961233 42961360 -156668790 - MIR SINE MIR -1 261 117 681 274 101 14 chr5 42962239 42962447 -156667703 + MIR SINE MIR 6 231 -31 812 245 30 55 chr5 42962733 42962970 -156667180 + MIR SINE MIR 17 247 -15 634 192 148 16 chr5 42964789 42964971 -156665179 + MER20 DNA MER1_type 14 219 0 235 71 48 0 chr5 42966028 42966070 -156664080 + (CA)n Simple_repeat Simple_repeat 1 44 0 2289 87 3 10 chr5 42966334 42966633 -156663517 - AluSx SINE Alu -15 297 1 624 239 0 0 chr5 42967734 42967851 -156662299 + FLAM_A SINE Alu 1 117 -16 2364 57 40 3 chr5 42968313 42968613 -156661537 - AluY SINE Alu 0 311 1 1819 167 0 19 chr5 42969024 42969341 -156660809 + AluJo SINE Alu 1 311 -1 261 261 267 12 chr5 42970144 42970309 -156659841 - MIR SINE MIR -51 211 5 4226 139 20 11 chr5 42971179 42971650 -156658500 + L1MB3 LINE L1 5429 5911 -272 2221 113 0 3 chr5 42971650 42971943 -156658207 + AluSx SINE Alu 1 292 -20 4226 139 20 11 chr5 42971943 42972217 -156657933 + L1MB3 LINE L1 5911 6181 -2 21 0 0 0 chr5 42972249 42972270 -156657880 + AT_rich Low_complexity Low_complexity 1 21 0 1248 233 58 25 chr5 42972828 42973228 -156656922 + MLT1C LTR MaLR 55 467 0 1308 120 29 19 chr5 42973404 42973613 -156656537 - L1PA10 LINE L1 -3 6165 5955 233 302 221 34 chr5 42974286 42974435 -156655715 - MIR3 SINE MIR -29 179 3 582 300 85 0 chr5 42974519 42974719 -156655431 - MIR SINE MIR -32 230 14 22 88 0 0 chr5 42975510 42975567 -156654583 + AT_rich Low_complexity Low_complexity 1 57 0 731 189 8 0 chr5 42975593 42975720 -156654430 - MIR SINE MIR -74 188 61 1900 177 0 16 chr5 42977131 42977534 -156652616 + AluJo SINE Alu 1 398 0 184 263 171 26 chr5 42977619 42977695 -156652455 - L2 LINE L2 0 3272 3186 597 178 27 111 chr5 42977790 42978015 -156652135 + MER58C DNA MER1_type 4 209 -6 596 273 112 8 chr5 42978054 42978321 -156651829 + MLT1J LTR MaLR 70 364 -147 1967 115 0 17 chr5 42978721 42979065 -156651085 + AluSq SINE Alu 3 341 0 615 335 88 20 chr5 42979092 42979388 -156650762 + L2 LINE L2 2953 3268 -4 1413 98 24 0 chr5 42979928 42980133 -156650017 + L1PA10 LINE L1 5959 6168 0 29 0 0 0 chr5 42980133 42980162 -156649988 + AT_rich Low_complexity Low_complexity 1 29 0 203 143 0 24 chr5 42982221 42982263 -156647887 + (TATG)n Simple_repeat Simple_repeat 4 44 0 834 267 40 25 chr5 42982278 42982634 -156647516 + MER93b LTR ERV1 12 401 -2 358 251 216 8 chr5 42983709 42983842 -156646308 - MER5A DNA MER1_type -1 188 26 425 296 121 47 chr5 42984164 42984593 -156645557 + L1MC4 LINE L1 7577 8037 -5 445 281 62 0 chr5 42986608 42986768 -156643382 - MIR SINE MIR -2 260 91 383 247 51 51 chr5 42986833 42987011 -156643139 - MER5B DNA MER1_type 0 178 1 1785 201 63 36 chr5 42987055 42987528 -156642622 + MLT1D LTR MaLR 1 486 -19 308 189 14 0 chr5 42987528 42987602 -156642548 + (TA)n Simple_repeat Simple_repeat 2 76 0 354 98 0 0 chr5 42987847 42987898 -156642252 + (CA)n Simple_repeat Simple_repeat 2 52 0 243 79 0 0 chr5 42988150 42988188 -156641962 + (A)n Simple_repeat Simple_repeat 1 38 0 252 275 0 25 chr5 42988279 42988359 -156641791 + MIR SINE MIR 181 258 -4 236 344 45 57 chr5 42988372 42988529 -156641621 - L2 LINE L2 -19 3253 3099 310 21 21 21 chr5 42989520 42989568 -156640582 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 4987 24 0 7 chr5 42989571 42990159 -156639991 - L1PA2 LINE L1 -6 6149 5566 1637 160 128 2 chr5 42990437 42990836 -156639314 - Charlie1 DNA MER1_type 0 2761 2313 645 271 0 6 chr5 42990831 42990997 -156639153 - Charlie1 DNA MER1_type -2596 165 1 * 4705 55 5 0 chr5 42991468 42992091 -156638059 + L1PA8 LINE L1 5566 6191 0 952 202 35 5 chr5 42992846 42993049 -156637101 + MER3 DNA MER1_type 1 209 0 275 326 97 35 chr5 42993782 42993926 -156636224 + MIR SINE MIR 65 217 -45 206 310 55 48 chr5 42994237 42994382 -156635768 - L2 LINE L2 -662 2652 2507 501 295 145 10 chr5 42994871 42995064 -156635086 + L3 LINE CR1 549 767 -810 594 65 54 0 chr5 42995089 42995182 -156634968 + L1MB3 LINE L1 6084 6181 -2 200 163 23 0 chr5 42995208 42995251 -156634899 + (TA)n Simple_repeat Simple_repeat 2 45 0 7456 192 17 6 chr5 42995995 42998338 -156631812 + L1PA15 LINE L1 3820 6163 -2 231 273 0 0 chr5 42998658 42998713 -156631437 + MER91 DNA MER1_type 9 63 -77 17336 44 1 0 chr5 42999144 43002072 -156628078 - L1PA5 LINE L1 -2 6152 3223 2259 108 0 3 chr5 43002605 43002902 -156627248 - AluSq SINE Alu -17 296 1 320 361 27 33 chr5 43003642 43003825 -156626325 + L1MC4a LINE L1 5717 5898 -1910 801 227 134 28 chr5 43003852 43004068 -156626082 + MIR SINE MIR 2 240 -22 396 0 0 0 chr5 43004074 43004118 -156626032 + (TA)n Simple_repeat Simple_repeat 2 45 0 200 200 18 91 chr5 43004752 43004807 -156625343 - L2 LINE L2 -5 3267 3217 261 0 0 0 chr5 43004892 43004921 -156625229 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 456 176 0 0 chr5 43005474 43005559 -156624591 + L1MB3 LINE L1 5824 5908 -275 1949 132 7 0 chr5 43005559 43005839 -156624311 + AluSx SINE Alu 1 282 -30 1010 185 0 38 chr5 43005915 43006126 -156624024 - MER3 DNA MER1_type -3 206 4 963 257 9 0 chr5 43006270 43006492 -156623658 - MER58A DNA MER1_type 0 224 1 2216 144 24 27 chr5 43006847 43007223 -156622927 + THE1C LTR MaLR 1 375 0 2267 60 0 3 chr5 43008865 43009193 -156620957 + AluY SINE Alu 1 327 0 24 32 0 0 chr5 43009427 43009458 -156620692 + AT_rich Low_complexity Low_complexity 1 31 0 567 275 144 18 chr5 43009745 43009967 -156620183 + MIR SINE MIR 13 262 0 286 192 0 64 chr5 43010482 43010560 -156619590 - L1PA13 LINE L1 -17 6146 6074 4665 97 7 10 chr5 43010724 43011426 -156618724 - L1PA12 LINE L1 -42 6126 5427 335 246 57 80 chr5 43012294 43012469 -156617681 - L1MC4 LINE L1 -6 8036 7866 411 293 131 15 chr5 43014462 43014660 -156615490 - MIR SINE MIR -10 252 32 455 311 37 6 chr5 43014776 43014937 -156615213 + MER5B DNA MER1_type 13 178 0 941 134 70 6 chr5 43014974 43015145 -156615005 - MER5A DNA MER1_type -7 182 1 2240 129 0 0 chr5 43015320 43015629 -156614521 + AluSx SINE Alu 1 309 -3 590 187 12 102 chr5 43016040 43016206 -156613944 + MER20 DNA MER1_type 1 151 -68 301 207 0 0 chr5 43016225 43016283 -156613867 + MER20 DNA MER1_type 101 158 -61 229 256 49 82 chr5 43016804 43016876 -156613274 + L1MEd LINE L1 915 988 -5131 497 220 28 0 chr5 43016876 43016985 -156613165 + MER81 DNA DNA 1 112 -2 229 256 49 82 chr5 43016985 43017217 -156612933 + L1MEd LINE L1 988 1209 -4910 905 238 15 5 chr5 43017235 43017441 -156612709 + MER58A DNA MER1_type 1 208 -16 290 298 35 7 chr5 43017602 43017743 -156612407 + HAL1 LINE L1 1503 1647 -860 401 290 0 0 chr5 43017856 43017956 -156612194 + MLT1I LTR MaLR 79 178 -231 1800 88 0 8 chr5 43018071 43018320 -156611830 + L1PA8A LINE L1 5885 6131 0 315 0 0 0 chr5 43018340 43018375 -156611775 + (CA)n Simple_repeat Simple_repeat 2 36 0 2047 131 0 0 chr5 43018467 43018776 -156611374 + AluSx SINE Alu 1 309 0 568 283 57 42 chr5 43018804 43019623 -156610527 + L1ME LINE L1 4793 5617 -504 185 262 0 66 chr5 43020869 43020930 -156609220 + L2 LINE L2 2700 2756 -558 627 155 9 17 chr5 43020955 43021071 -156609079 + MLT1A1 LTR MaLR 7 121 -244 924 226 21 29 chr5 43021232 43021475 -156608675 + MLT1A1 LTR MaLR 125 365 0 268 298 89 21 chr5 43021475 43021715 -156608435 + L2 LINE L2 2793 3046 -267 * 282 288 24 56 chr5 43021691 43021816 -156608334 + MER5B DNA MER1_type 58 178 0 484 179 278 40 chr5 43021981 43022056 -156608094 + MER5A DNA MER1_type 2 58 -131 2102 94 0 47 chr5 43022056 43022202 -156607948 + AluSq SINE Alu 1 152 -156 2357 88 0 10 chr5 43022202 43022510 -156607640 + AluY SINE Alu 1 305 -6 2102 94 0 47 chr5 43022510 43022685 -156607465 + AluSq SINE Alu 152 308 0 484 179 278 40 chr5 43022685 43022759 -156607391 + MER5A DNA MER1_type 58 188 -1 305 250 36 0 chr5 43022794 43022878 -156607272 + L2 LINE L2 3186 3272 0 447 365 19 9 chr5 43023968 43024182 -156605968 + MIR SINE MIR 7 222 -40 213 319 66 11 chr5 43024268 43024359 -156605791 - MIR SINE MIR -8 254 159 467 33 16 0 chr5 43024361 43024422 -156605728 + (CAT)n Simple_repeat Simple_repeat 2 63 0 470 314 142 34 chr5 43024791 43025228 -156604922 + L1ME4a LINE L1 5579 6062 -59 1419 186 52 35 chr5 43025231 43025521 -156604629 - AluJo SINE Alu -4 308 14 2259 98 7 0 chr5 43025570 43025867 -156604283 - AluSq SINE Alu -14 299 1 2389 93 0 0 chr5 43026041 43026351 -156603799 - AluY SINE Alu -1 310 1 207 0 0 0 chr5 43027929 43027952 -156602198 + (TG)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr5 43028016 43028044 -156602106 + AT_rich Low_complexity Low_complexity 1 28 0 780 228 41 0 chr5 43029058 43029229 -156600921 + MER5B DNA MER1_type 1 178 0 2393 64 3 26 chr5 43029387 43029698 -156600452 + AluY SINE Alu 3 306 -5 2761 56 15 6 chr5 43029985 43030323 -156599827 + SVA Other Other 707 1047 -339 2146 105 0 0 chr5 43030928 43031204 -156598946 - AluSg SINE Alu -13 297 22 183 182 0 0 chr5 43031394 43031427 -156598723 + L2 LINE L2 3020 3052 -220 225 94 0 0 chr5 43032713 43032745 -156597405 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 42805 53 2 0 chr5 43032747 43038889 -156591261 - L1PA5 LINE L1 -4 6150 2 644 80 35 9 chr5 43038889 43039002 -156591148 + CT-rich Low_complexity Low_complexity 1 116 0 802 160 22 13 chr5 43039013 43039241 -156590909 + CT-rich Low_complexity Low_complexity 1 230 0 863 154 58 19 chr5 43039708 43039864 -156590286 - THE1C LTR MaLR -213 162 1 25 51 0 0 chr5 43041002 43041041 -156589109 + AT_rich Low_complexity Low_complexity 1 39 0 216 255 0 0 chr5 43041237 43041288 -156588862 + CT-rich Low_complexity Low_complexity 2 52 0 406 206 14 21 chr5 43041507 43041618 -156588532 - L1MA4A LINE L1 -201 6102 5983 22 0 0 0 chr5 43042032 43042054 -156588096 + AT_rich Low_complexity Low_complexity 1 22 0 248 250 0 0 chr5 43042558 43042614 -156587536 + MER5B DNA MER1_type 2 57 -121 581 315 73 76 chr5 43043142 43043679 -156586471 + L1MEd LINE L1 535 1069 -5050 26 30 0 0 chr5 43043882 43043915 -156586235 + AT_rich Low_complexity Low_complexity 1 33 0 794 239 0 5 chr5 43044187 43044388 -156585762 - L1P LINE L1 -989 5157 4958 3131 144 16 63 chr5 43044388 43044985 -156585165 + L1PB4 LINE L1 5567 6154 -2 221 231 0 31 chr5 43045338 43045403 -156584747 + (TA)n Simple_repeat Simple_repeat 1 63 0 31 76 0 0 chr5 43045469 43045535 -156584615 + AT_rich Low_complexity Low_complexity 1 66 0 292 278 89 58 chr5 43046040 43046231 -156583919 - L2 LINE L2 0 3313 3117 468 210 10 0 chr5 43047145 43047245 -156582905 + L1MA8 LINE L1 5990 6090 -201 274 0 73 0 chr5 43047457 43047498 -156582652 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 351 290 66 50 chr5 43048253 43048556 -156581594 + L1ME2 LINE L1 904 1211 -4908 1146 280 63 95 chr5 43048747 43049336 -156580814 + L1ME1 LINE L1 1013 1545 -4851 183 42 0 0 chr5 43049336 43049360 -156580790 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1146 280 63 95 chr5 43049360 43049980 -156580170 + L1ME1 LINE L1 1545 2183 -4213 513 217 42 0 chr5 43049959 43050079 -156580071 + L1MA6 LINE L1 117 241 -6608 * 13831 196 43 27 chr5 43050096 43054303 -156575847 + L1MA6 LINE L1 2720 6997 -5 4269 235 147 11 chr5 43054323 43056208 -156573942 + L1ME1 LINE L1 2804 4931 -1917 1680 216 113 73 chr5 43056208 43056827 -156573323 + L1ME1 LINE L1 6213 6856 -12 352 255 143 31 chr5 43056968 43057129 -156573021 + L2 LINE L2 3134 3312 -1 1912 167 3 0 chr5 43057133 43057439 -156572711 + AluSx SINE Alu 1 307 -5 262 322 120 12 chr5 43057519 43057777 -156572373 + L1ME2 LINE L1 2240 2525 -3604 631 250 33 0 chr5 43057777 43057961 -156572189 - L1M4 LINE L1 -1891 4255 4066 369 270 63 31 chr5 43057977 43058136 -156572014 + L1ME2 LINE L1 4982 5145 -984 1623 226 52 30 chr5 43058139 43058599 -156571551 + L1MC4a LINE L1 7320 8026 -16 287 155 35 0 chr5 43058630 43058688 -156571462 + L1MD3 LINE L1 7925 7984 -11 227 268 14 0 chr5 43058739 43058810 -156571340 + L1ME2 LINE L1 5198 5269 -860 210 148 59 30 chr5 43060477 43060578 -156569572 + (TA)n Simple_repeat Simple_repeat 2 105 0 * 228 141 47 47 chr5 43060503 43060588 -156569562 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 3040 181 56 3 chr5 43060644 43061217 -156568933 + MER6A DNA MER2_type 1 603 -2 2244 115 0 7 chr5 43062879 43063184 -156566966 + AluSx SINE Alu 1 303 -9 192 320 77 0 chr5 43063401 43063479 -156566671 - MIR SINE MIR -175 87 4 21 36 0 0 chr5 43063908 43063936 -156566214 + AT_rich Low_complexity Low_complexity 1 28 0 390 304 0 26 chr5 43064332 43064447 -156565703 - MIR3 SINE MIR -21 187 76 247 330 45 62 chr5 43064510 43064686 -156565464 + MER5B DNA MER1_type 1 173 -5 514 275 75 31 chr5 43064886 43065046 -156565104 - MER91B DNA MER1_type -9 181 15 810 271 49 26 chr5 43065663 43065907 -156564243 - MIR SINE MIR 0 262 12 198 143 0 0 chr5 43066259 43066294 -156563856 + (CA)n Simple_repeat Simple_repeat 1 35 0 268 261 70 57 chr5 43067499 43067656 -156562494 - MER117 DNA MER1_type -38 159 1 2572 213 37 12 chr5 43068485 43069073 -156561077 + L1ME2 LINE L1 5417 6019 -128 438 224 44 2 chr5 43069202 43069328 -156560822 + L1ME2 LINE L1 6023 6316 -1 354 355 41 29 chr5 43069334 43069506 -156560644 - MIR3 SINE MIR -28 180 7 1733 262 119 104 chr5 43070103 43071168 -156558982 + L2 LINE L2 1658 2705 -609 2239 100 3 0 chr5 43071168 43071458 -156558692 + AluSp SINE Alu 1 291 -22 266 0 0 29 chr5 43071458 43071493 -156558657 + (TTAAA)n Simple_repeat Simple_repeat 2 35 0 1733 262 119 104 chr5 43071493 43071598 -156558552 + L2 LINE L2 2704 2847 -467 363 293 109 89 chr5 43071624 43072017 -156558133 + L2 LINE L2 2907 3307 -6 569 274 80 25 chr5 43073130 43073331 -156556819 + MIR SINE MIR 2 213 -49 8650 139 6 12 chr5 43073344 43075540 -156554610 - L1PA11 LINE L1 -4 6170 3971 252 398 0 0 chr5 43076113 43076201 -156553949 + L2 LINE L2 2979 3066 -206 9596 226 60 30 chr5 43076320 43079659 -156550491 + L1M3e LINE L1 1104 4318 -2788 1588 185 58 21 chr5 43079659 43079989 -156550161 - MER2 DNA MER2_type -2 342 1 9596 226 60 30 chr5 43079989 43081405 -156548745 + L1M3e LINE L1 4318 5690 -1416 291 228 291 8 chr5 43082221 43082348 -156547802 + MLT1F LTR MaLR 380 542 0 312 351 34 58 chr5 43082384 43082495 -156547655 + L2 LINE L2 2104 2216 -1098 2308 94 3 0 chr5 43082495 43082792 -156547358 + AluSg SINE Alu 2 299 -11 312 351 34 58 chr5 43082792 43082973 -156547177 + L2 LINE L2 2216 2389 -925 756 296 28 16 chr5 43083077 43083324 -156546826 - MIR SINE MIR -12 250 1 308 345 142 19 chr5 43083325 43083635 -156546515 + L2 LINE L2 2494 2841 -473 586 333 89 48 chr5 43084135 43084817 -156545333 - L2 LINE L2 -467 2847 2138 937 235 78 0 chr5 43086313 43086530 -156543620 - MIR SINE MIR 0 262 29 827 228 67 12 chr5 43087089 43087343 -156542807 + MER46C DNA MER2_type 60 327 -11 22 70 0 0 chr5 43089471 43089514 -156540636 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr5 43090134 43090169 -156539981 + AT_rich Low_complexity Low_complexity 1 35 0 370 275 83 31 chr5 43090201 43090394 -156539756 + MLT1H LTR MaLR 25 227 -322 189 0 0 0 chr5 43090557 43090578 -156539572 + (TCTCCC)n Simple_repeat Simple_repeat 4 24 0 5436 82 26 52 chr5 43090605 43092003 -156538147 + SVA Other Other 14 1047 -339 1389 207 108 13 chr5 43092411 43092725 -156537425 - MER2 DNA MER2_type 0 344 1 2019 198 103 65 chr5 43092928 43093219 -156536931 - Charlie2 DNA MER1_type -1 2861 2583 563 154 0 0 chr5 43093219 43093310 -156536840 - L1MC1 LINE L1 0 6333 6243 2019 198 103 65 chr5 43093310 43093936 -156536214 - Charlie2 DNA MER1_type -279 2583 1909 273 242 40 166 chr5 43094026 43094303 -156535847 - Charlie2 DNA MER1_type -2540 242 1 595 137 170 142 chr5 43096503 43096660 -156533490 - MER20 DNA MER1_type -1 218 52 2441 70 0 0 chr5 43096660 43096958 -156533192 - AluY SINE Alu -5 306 9 595 137 170 142 chr5 43096958 43097012 -156533138 - MER20 DNA MER1_type -167 52 1 225 240 0 0 chr5 43097185 43097235 -156532915 - L2 LINE L2 0 3313 3264 39854 62 2 0 chr5 43100067 43106189 -156523961 + L1PA5 LINE L1 17 6151 -3 896 348 104 36 chr5 43106487 43106987 -156523163 + L2 LINE L2 1681 2145 -1169 1634 178 152 13 chr5 43106987 43107363 -156522787 - MSTA LTR MaLR 0 428 1 8815 146 30 29 chr5 43107363 43108938 -156521212 - MSTA-int LTR MaLR 0 1580 3 1850 154 152 13 chr5 43108940 43109316 -156520834 - MSTA LTR MaLR 0 428 1 896 348 104 36 chr5 43109316 43109846 -156520304 + L2 LINE L2 2145 2786 -528 1825 191 74 51 chr5 43109870 43110357 -156519793 + MLT1D LTR MaLR 1 498 -7 180 0 0 0 chr5 43110724 43110744 -156519406 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 212 247 144 41 chr5 43110787 43110884 -156519266 + L2 LINE L2 3205 3311 -2 517 298 28 44 chr5 43111307 43111488 -156518662 + MER5B DNA MER1_type 1 178 0 193 224 209 0 chr5 43111621 43111688 -156518462 - L2 LINE L2 -25 3288 3208 268 221 38 99 chr5 43111701 43111832 -156518318 + L2 LINE L2 3191 3313 0 2270 124 17 0 chr5 43112669 43113023 -156517127 - MLT1B LTR MaLR 0 390 31 291 295 61 43 chr5 43113189 43113327 -156516823 - MIR3 SINE MIR -67 141 15 412 274 78 69 chr5 43114456 43114660 -156515490 - L2 LINE L2 -13 3300 3095 835 262 104 50 chr5 43114719 43115231 -156514919 + MLT1G LTR MaLR 1 580 -15 734 260 100 111 chr5 43115253 43115711 -156514439 - L2 LINE L2 -277 3036 2596 2346 53 0 0 chr5 43115711 43116023 -156514127 + AluY SINE Alu 1 312 0 734 260 100 111 chr5 43116023 43116427 -156513723 - L2 LINE L2 -717 2596 2189 278 200 89 22 chr5 43116461 43116551 -156513599 - L2 LINE L2 -1067 2247 2152 494 289 20 0 chr5 43116575 43116727 -156513423 - L2 LINE L2 -1635 1679 1525 391 350 25 19 chr5 43116768 43116928 -156513222 + L2 LINE L2 3111 3271 -1 732 244 27 58 chr5 43117154 43117412 -156512738 - MIR SINE MIR 0 262 13 1098 260 79 23 chr5 43117569 43118039 -156512111 + L1MC4a LINE L1 5263 5758 -2050 390 286 36 85 chr5 43118055 43118303 -156511847 + L1MC4a LINE L1 5819 6054 -1754 819 266 80 0 chr5 43118461 43118698 -156511452 - MIR SINE MIR 0 262 7 866 254 8 54 chr5 43118994 43119115 -156511035 - MIR SINE MIR -3 259 153 1500 178 60 97 chr5 43119115 43119598 -156510552 + MLT1C LTR MaLR 1 465 -2 866 254 8 54 chr5 43119598 43119716 -156510434 - MIR SINE MIR -109 153 31 21 0 0 0 chr5 43120085 43120106 -156510044 + AT_rich Low_complexity Low_complexity 1 21 0 2246 101 0 13 chr5 43121742 43122059 -156508091 + AluSq SINE Alu 1 313 0 449 272 41 59 chr5 43122562 43122731 -156507419 - MER5B DNA MER1_type -5 173 8 2072 146 0 0 chr5 43123224 43123519 -156506631 + AluSx SINE Alu 1 295 -17 302 181 71 0 chr5 43123898 43123906 -156506244 + (TA)n Simple_repeat Simple_repeat 2 8 -129 1470 146 60 86 chr5 43123906 43123950 -156506200 - THE1C LTR MaLR 0 375 331 2029 117 7 7 chr5 43123950 43124241 -156505909 + AluSx SINE Alu 6 296 -16 1470 146 60 86 chr5 43124241 43124426 -156505724 - THE1C LTR MaLR -44 331 157 2273 103 0 7 chr5 43124426 43124728 -156505422 + AluSq SINE Alu 1 300 -13 1470 146 60 86 chr5 43124728 43124882 -156505268 - THE1C LTR MaLR -218 157 1 302 181 71 0 chr5 43124882 43125000 -156505150 + (TA)n Simple_repeat Simple_repeat 8 137 0 359 264 218 28 chr5 43125180 43125396 -156504754 - MIR SINE MIR 0 262 6 247 254 211 35 chr5 43125474 43125616 -156504534 - MIR SINE MIR -88 174 8 1147 180 150 26 chr5 43127318 43127624 -156502526 + MER2 DNA MER2_type 1 344 0 347 245 98 0 chr5 43130516 43130618 -156499532 + MIR SINE MIR 148 259 -3 295 246 82 27 chr5 43130876 43130986 -156499164 - MER5A DNA MER1_type -26 163 48 183 42 0 0 chr5 43131202 43131226 -156498924 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1990 135 0 3 chr5 43132602 43132908 -156497242 + AluSx SINE Alu 1 305 0 2092 125 34 0 chr5 43136171 43136466 -156493684 + AluSx SINE Alu 1 305 -7 1784 136 55 27 chr5 43141186 43141516 -156488634 - MER44D DNA MER2_type 0 609 1 23 0 0 0 chr5 43142173 43142196 -156487954 + AT_rich Low_complexity Low_complexity 1 23 0 187 235 0 39 chr5 43143881 43143932 -156486218 - L3 LINE CR1 -5 1572 1524 210 200 67 0 chr5 43144532 43144577 -156485573 + L2 LINE L2 3224 3271 -1 201 176 0 0 chr5 43144675 43144709 -156485441 + T-rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 43146474 43146495 -156483655 + AT_rich Low_complexity Low_complexity 1 21 0 2130 109 0 3 chr5 43146519 43146813 -156483337 - AluSx SINE Alu -19 293 1 368 221 30 0 chr5 43148983 43149114 -156481036 + (TA)n Simple_repeat Simple_repeat 1 135 0 330 275 63 41 chr5 43149609 43149757 -156480393 + MIR3 SINE MIR 37 187 -21 437 304 69 20 chr5 43152827 43152936 -156477214 - MIR SINE MIR -36 226 124 2047 90 0 22 chr5 43152936 43153214 -156476936 - AluSg SINE Alu -4 306 35 437 304 69 20 chr5 43153214 43153308 -156476842 - MIR SINE MIR -138 124 13 207 281 18 18 chr5 43153401 43153458 -156476692 + L2 LINE L2 3124 3180 -92 1323 232 169 23 chr5 43153905 43154521 -156475629 + LTR50 LTR ERVL 1 706 -89 406 156 130 0 chr5 43154529 43154606 -156475544 + 5S rRNA rRNA 2 88 -33 2244 77 20 17 chr5 43157235 43157533 -156472617 - AluSq SINE Alu -14 299 1 349 329 186 0 chr5 43158472 43158682 -156471468 + MIR SINE MIR 6 254 -8 1985 104 36 93 chr5 43158683 43158732 -156471418 - THE1B LTR MaLR 0 364 314 342 0 0 0 chr5 43158732 43158770 -156471380 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 831 176 0 0 chr5 43158770 43158918 -156471232 - FRAM SINE Alu -18 148 1 1985 104 36 93 chr5 43158918 43159253 -156470897 - THE1B LTR MaLR -48 316 1 2089 145 0 3 chr5 43159415 43159719 -156470431 - AluSq SINE Alu -10 303 1 448 275 25 17 chr5 43159968 43160088 -156470062 + MER5B DNA MER1_type 37 157 -21 255 321 23 23 chr5 43160163 43160294 -156469856 - MIR3 SINE MIR -24 184 54 2168 33 7 0 chr5 43160892 43161165 -156468985 - L1PA4 LINE L1 -263 5892 5618 2002 45 0 0 chr5 43161165 43161409 -156468741 + L1PA4 LINE L1 5911 6155 0 216 210 16 0 chr5 43161415 43161477 -156468673 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 2231 113 0 19 chr5 43161562 43161880 -156468270 - AluSx SINE Alu 0 312 1 1989 105 59 0 chr5 43164217 43164503 -156465647 - AluSg SINE Alu -7 303 1 414 288 102 19 chr5 43169410 43169615 -156460535 - L2 LINE L2 -1 3312 3091 231 169 65 65 chr5 43169744 43169821 -156460329 - MIR SINE MIR -111 151 75 408 301 68 30 chr5 43171868 43172001 -156458149 - L2 LINE L2 -20 3252 3115 1792 89 24 0 chr5 43174064 43174312 -156455838 + L1PA7 LINE L1 5901 6154 0 224 298 169 16 chr5 43175907 43176031 -156454119 - MIR SINE MIR -118 144 2 192 371 133 9 chr5 43176149 43176254 -156453896 - MIR SINE MIR -131 131 14 230 220 60 0 chr5 43176389 43176439 -156453711 + MIR SINE MIR 54 106 -156 395 217 322 0 chr5 43177033 43177148 -156453002 - MER5A DNA MER1_type -37 152 1 570 295 74 11 chr5 43178357 43178547 -156451603 - MIR SINE MIR -50 212 11 1760 136 0 50 chr5 43178776 43179100 -156451050 + AluSx SINE Alu 1 282 -30 437 0 0 19 chr5 43181473 43181527 -156448623 + (CA)n Simple_repeat Simple_repeat 2 54 0 345 324 58 24 chr5 43185443 43185490 -156444660 + L1MC4a LINE L1 5636 5680 -2128 2075 89 48 20 chr5 43185490 43185782 -156444368 - AluSg1 SINE Alu -9 300 1 345 324 58 24 chr5 43185782 43186027 -156444123 + L1MC4a LINE L1 5680 5938 -1870 3568 98 23 52 chr5 43186371 43187105 -156443045 + SVA Other Other 433 1047 -339 1537 191 115 19 chr5 43187512 43187826 -156442324 - MER2 DNA MER2_type 0 344 1 2420 199 103 65 chr5 43188029 43188320 -156441830 - Charlie2 DNA MER1_type -1 2861 2582 611 154 0 0 chr5 43188320 43188411 -156441739 - L1MC1 LINE L1 0 6333 6243 2420 199 103 65 chr5 43188411 43189044 -156441106 - Charlie2 DNA MER1_type -280 2582 1902 360 239 37 175 chr5 43189107 43189404 -156440746 - Charlie2 DNA MER1_type -2606 256 1 481 142 236 68 chr5 43191604 43191752 -156438398 - MER20 DNA MER1_type -1 218 46 2484 81 0 0 chr5 43191761 43192068 -156438082 - AluY SINE Alu -4 307 1 225 0 0 0 chr5 43193646 43193671 -156436479 + (TG)n Simple_repeat Simple_repeat 2 26 0 783 228 41 0 chr5 43194780 43194951 -156435199 + MER5B DNA MER1_type 1 178 0 502 321 110 51 chr5 43197906 43198558 -156431592 + L2 LINE L2 2157 2847 -467 1218 156 29 37 chr5 43199017 43199261 -156430889 + L1MB5 LINE L1 5929 6170 -4 1834 102 25 4 chr5 43200665 43200986 -156429164 + AluSg SINE Alu 1 327 0 1602 159 4 8 chr5 43201511 43201768 -156428382 + AluJo SINE Alu 45 300 -12 2290 90 0 17 chr5 43201791 43202091 -156428059 + AluY SINE Alu 1 295 -16 2282 103 0 7 chr5 43202105 43202406 -156427744 + AluSq SINE Alu 5 303 -10 648 130 0 0 chr5 43202422 43202514 -156427636 + AluSg/x SINE Alu 213 304 -8 931 153 23 34 chr5 43202592 43202768 -156427382 - AluJb SINE Alu -9 303 130 414 176 186 29 chr5 43204280 43204382 -156425768 + MER2 DNA MER2_type 225 342 -3 1786 78 22 19 chr5 43204779 43205049 -156425101 - SVA Other Other -339 1047 777 606 278 0 0 chr5 43205361 43205674 -156424476 + (TGAA)n Simple_repeat Simple_repeat 1 313 0 602 238 4 0 chr5 43205694 43205982 -156424168 + (TGAA)n Simple_repeat Simple_repeat 1 289 0 * 750 211 0 0 chr5 43205949 43206129 -156424021 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 2126 147 0 0 chr5 43206932 43207232 -156422918 - AluSx SINE Alu -12 300 1 469 179 12 0 chr5 43207233 43207317 -156422833 - MIR SINE MIR -115 147 63 210 118 0 0 chr5 43207323 43207357 -156422793 + (A)n Simple_repeat Simple_repeat 1 34 0 2013 148 0 3 chr5 43207368 43207671 -156422479 + AluJb SINE Alu 2 303 -9 2345 81 3 10 chr5 43207671 43207979 -156422171 + AluY SINE Alu 1 306 -5 1061 147 29 0 chr5 43207999 43208169 -156421981 + AluSg/x SINE Alu 135 309 -1 327 253 0 44 chr5 43208176 43208267 -156421883 - MER3 DNA MER1_type -122 87 1 1818 133 68 28 chr5 43208976 43209300 -156420850 + MER44D DNA MER2_type 1 607 -2 925 235 78 0 chr5 43210699 43210916 -156419234 + MIR SINE MIR 29 262 0 288 290 76 92 chr5 43212532 43212663 -156417487 - MER5B DNA MER1_type -49 129 1 206 269 172 21 chr5 43213085 43213178 -156416972 - L2 LINE L2 -2 3311 3205 1929 192 81 48 chr5 43213599 43214079 -156416071 - MLT1D LTR MaLR -4 501 6 539 335 101 38 chr5 43214106 43214631 -156415519 - L2 LINE L2 -528 2786 2229 823 174 115 73 chr5 43214631 43214918 -156415232 + MSTA LTR MaLR 1 299 -129 516 244 118 63 chr5 43215376 43215566 -156414584 - L1MC5 LINE L1 -196 7765 7587 2188 119 0 0 chr5 43215566 43215860 -156414290 - AluSx SINE Alu -17 295 2 516 244 118 63 chr5 43215860 43216100 -156414050 - L1MC5 LINE L1 -374 7587 7311 190 215 139 25 chr5 43216587 43216666 -156413484 - L2 LINE L2 -165 3148 3061 1306 232 56 19 chr5 43216673 43216996 -156413154 - MLT1C LTR MaLR 0 467 133 243 268 14 28 chr5 43217395 43217466 -156412684 + Charlie4 DNA MER1_type 1883 1952 -9 193 250 0 0 chr5 43217658 43217698 -156412452 - MIR SINE MIR -129 79 40 515 281 3 123 chr5 43217772 43218096 -156412054 + L3 LINE CR1 1036 1320 -257 450 186 133 0 chr5 43218110 43218223 -156411927 + MLT1C LTR MaLR 6 133 -334 395 332 133 15 chr5 43218322 43218518 -156411632 + MIR SINE MIR 23 241 -21 437 307 117 16 chr5 43218575 43218898 -156411252 + L1ME3A LINE L1 5585 5936 -234 716 240 143 10 chr5 43219111 43219307 -156410843 - MIR SINE MIR -38 224 3 1471 102 0 0 chr5 43219485 43219671 -156410479 - AluSg1 SINE Alu -123 186 1 214 164 36 0 chr5 43219972 43220027 -156410123 + (TG)n Simple_repeat Simple_repeat 2 58 0 223 240 0 20 chr5 43220685 43220735 -156409415 + CT-rich Low_complexity Low_complexity 1 49 0 237 65 0 0 chr5 43220742 43220773 -156409377 + (CA)n Simple_repeat Simple_repeat 1 31 0 517 268 51 19 chr5 43220843 43221000 -156409150 + MER63A DNA MER1_type 49 210 0 496 333 91 9 chr5 43221232 43221442 -156408708 + MIR SINE MIR 36 262 0 1392 274 44 27 chr5 43221648 43222154 -156407996 + L2 LINE L2 2555 3064 -249 369 216 167 10 chr5 43222154 43222256 -156407894 + MLT1C LTR MaLR 7 124 -343 284 221 21 21 chr5 43222361 43222456 -156407694 + L1MC5 LINE L1 7840 7934 -27 375 78 0 0 chr5 43222482 43222533 -156407617 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 735 174 0 0 chr5 43223441 43223550 -156406600 + AluJb SINE Alu 179 287 -25 315 239 22 43 chr5 43223551 43223643 -156406507 - L1MC4 LINE L1 -1339 6703 6614 2376 121 28 36 chr5 43223647 43224011 -156406139 + THE1B LTR MaLR 4 364 0 187 368 26 26 chr5 43224014 43224131 -156406019 - MIR SINE MIR -62 200 84 304 127 48 0 chr5 43226649 43226712 -156403438 + GA-rich Low_complexity Low_complexity 4 69 0 213 121 0 0 chr5 43228129 43228162 -156401988 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 22 80 0 0 chr5 43228169 43228219 -156401931 + AT_rich Low_complexity Low_complexity 1 50 0 1653 156 18 127 chr5 43228232 43228617 -156401533 + MER7A DNA MER2_type 1 341 -5 1813 132 3 43 chr5 43228862 43229166 -156400984 - AluSx SINE Alu -20 292 1 180 0 0 0 chr5 43229805 43229825 -156400325 + (TA)n Simple_repeat Simple_repeat 2 21 0 1849 155 0 20 chr5 43229894 43230191 -156399959 + AluJb SINE Alu 1 291 -21 321 135 0 0 chr5 43230192 43230244 -156399906 + (TA)n Simple_repeat Simple_repeat 1 52 0 247 233 47 0 chr5 43230249 43230335 -156399815 - L1MC4 LINE L1 -1339 6703 6614 238 255 0 43 chr5 43230259 43230353 -156399797 + L1MC4 LINE L1 6614 6703 -1339 * 226 274 55 0 chr5 43230335 43230408 -156399742 - L1MC4 LINE L1 -1349 6693 6617 * 366 183 0 0 chr5 43230411 43230482 -156399668 + (TA)n Simple_repeat Simple_repeat 1 71 0 322 297 41 41 chr5 43231177 43231322 -156398828 + HAL1 LINE L1 2307 2451 -56 325 316 39 124 chr5 43231622 43231977 -156398173 + L2 LINE L2 2948 3272 0 468 232 83 18 chr5 43232104 43232272 -156397878 + MER104 DNA MER2_type 2 180 0 1239 106 252 0 chr5 43233260 43233516 -156396634 - AluSx SINE Alu 0 313 1 1706 215 65 70 chr5 43233841 43234398 -156395752 - MLT2B3 LTR ERVL 0 554 1 2054 98 0 0 chr5 43234521 43234786 -156395364 - AluSx SINE Alu -45 267 3 189 189 47 9 chr5 43235654 43235760 -156394390 + (TA)n Simple_repeat Simple_repeat 2 111 0 401 344 172 0 chr5 43235772 43235999 -156394151 + L3 LINE CR1 1304 1569 -8 1146 189 65 119 chr5 43236303 43236715 -156393435 + MLT1C LTR MaLR 1 467 0 195 42 0 0 chr5 43236792 43236816 -156393334 + (CA)n Simple_repeat Simple_repeat 1 24 0 494 297 21 81 chr5 43236917 43237250 -156392900 - L1MC4 LINE L1 -1962 5846 5534 1502 96 0 19 chr5 43237596 43237804 -156392346 - AluY SINE Alu -10 301 98 358 219 26 3 chr5 43238941 43239030 -156391120 + L1MC/D LINE L1 5680 5766 -400 192 406 83 0 chr5 43239507 43239640 -156390510 - MIR3 SINE MIR -2 206 63 2201 66 10 7 chr5 43240122 43240442 -156389708 - AluY SINE Alu 0 321 1 1175 302 63 2 chr5 43242988 43243399 -156386751 + L2 LINE L2 2169 2604 -710 2006 122 7 0 chr5 43243468 43243785 -156386365 + AluSc SINE Alu 1 319 0 310 395 59 9 chr5 43243822 43244082 -156386068 + L2 LINE L2 2787 3054 -259 1161 284 91 30 chr5 43244087 43244559 -156385591 - LTR33A LTR ERVL 0 523 23 280 258 45 45 chr5 43244688 43244777 -156385373 + L2 LINE L2 3221 3309 -4 33 43 0 0 chr5 43245196 43245243 -156384907 + AT_rich Low_complexity Low_complexity 1 47 0 309 291 115 64 chr5 43245446 43245680 -156384470 - L3b LINE CR1 -27 1556 1311 603 288 107 17 chr5 43246221 43246454 -156383696 - MIR SINE MIR -1 261 8 318 106 0 0 chr5 43247160 43247207 -156382943 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 121 0 0 chr5 43247234 43247267 -156382883 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 184 338 97 28 chr5 43247410 43247555 -156382595 + L2 LINE L2 2907 3061 -252 381 235 181 72 chr5 43248431 43248652 -156381498 - MIR SINE MIR -10 252 8 448 258 182 0 chr5 43248652 43248784 -156381366 + MER5A DNA MER1_type 33 188 -1 2323 88 0 3 chr5 43249064 43249360 -156380790 + AluSc SINE Alu 1 295 -14 1961 138 13 3 chr5 43250194 43250498 -156379652 + AluJb SINE Alu 1 307 -5 367 313 0 0 chr5 43250608 43250707 -156379443 - L2 LINE L2 -8 3305 3207 298 245 90 75 chr5 43250744 43250932 -156379218 + L2 LINE L2 3123 3313 0 27 29 0 0 chr5 43251067 43251101 -156379049 + AT_rich Low_complexity Low_complexity 1 34 0 385 219 8 62 chr5 43251429 43251557 -156378593 + MER103 DNA DNA 2 122 -44 182 279 87 48 chr5 43251778 43251882 -156378268 - L2 LINE L2 -3 3269 3162 282 243 68 0 chr5 43252000 43252074 -156378076 - MIR SINE MIR -110 98 20 248 297 42 59 chr5 43252434 43252552 -156377598 - MIR3 SINE MIR -11 197 82 510 275 14 0 chr5 43252657 43252799 -156377351 - MIR SINE MIR -111 151 8 408 321 11 60 chr5 43252923 43253188 -156376962 - MARNA DNA Mariner -8 578 327 5076 139 25 5 chr5 43253788 43254621 -156375529 + L1PA16 LINE L1 5317 6166 0 23 33 0 0 chr5 43255163 43255193 -156374957 + AT_rich Low_complexity Low_complexity 1 30 0 195 256 215 6 chr5 43256252 43256354 -156373796 - MER5B DNA MER1_type -68 121 1 564 241 84 12 chr5 43256371 43256537 -156373613 - MER5B DNA MER1_type 0 178 1 1026 226 110 28 chr5 43257801 43258120 -156372030 - MER2 DNA MER2_type 0 345 1 232 200 0 0 chr5 43258307 43258352 -156371798 - L2 LINE L2 0 3313 3269 425 341 90 14 chr5 43259084 43259295 -156370855 + MIR SINE MIR 17 243 -19 1215 258 130 17 chr5 43259885 43260705 -156369445 - L2 LINE L2 0 3313 2411 249 316 32 42 chr5 43260970 43261065 -156369085 + MER5B DNA MER1_type 64 157 -21 399 320 28 6 chr5 43261316 43261494 -156368656 + MER117 DNA MER1_type 14 195 -2 214 178 0 22 chr5 43262945 43262990 -156367160 + (CATA)n Simple_repeat Simple_repeat 3 46 0 441 0 0 0 chr5 43262990 43263039 -156367111 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 369 58 0 0 chr5 43263842 43263894 -156366256 + (TA)n Simple_repeat Simple_repeat 2 53 0 943 260 71 57 chr5 43264967 43265639 -156364511 - L1ME1 LINE L1 -217 5949 5240 204 97 0 0 chr5 43265639 43265670 -156364480 + (TG)n Simple_repeat Simple_repeat 2 32 0 25 90 0 0 chr5 43265672 43265739 -156364411 + AT_rich Low_complexity Low_complexity 1 67 0 2542 26 7 13 chr5 43266493 43266800 -156363350 - AluY SINE Alu -6 305 1 413 123 0 31 chr5 43267716 43267781 -156362369 + AluS SINE Alu 224 286 -23 36 0 0 0 chr5 43267781 43267817 -156362333 + AT_rich Low_complexity Low_complexity 1 36 0 484 275 66 109 chr5 43268189 43268400 -156361750 - MIR SINE MIR -39 223 22 217 191 27 64 chr5 43268447 43268557 -156361593 + A-rich Low_complexity Low_complexity 3 108 0 720 138 0 166 chr5 43271127 43271344 -156358806 + MER96B DNA MER1_type? 1 181 -236 22 0 0 0 chr5 43272206 43272228 -156357922 + AT_rich Low_complexity Low_complexity 1 22 0 188 278 74 0 chr5 43272913 43272967 -156357183 + L2 LINE L2 3214 3271 -1 189 0 0 0 chr5 43273035 43273056 -156357094 + (T)n Simple_repeat Simple_repeat 1 21 0 459 301 63 0 chr5 43273299 43273442 -156356708 - MIR SINE MIR -1 261 110 400 230 0 0 chr5 43273631 43273705 -156356445 + L1ME LINE L1 11 84 -6775 28 0 0 0 chr5 43273739 43273767 -156356383 + AT_rich Low_complexity Low_complexity 1 28 0 221 134 62 27 chr5 43273772 43273884 -156356266 + (TATAA)n Simple_repeat Simple_repeat 5 120 0 363 110 68 49 chr5 43273896 43274059 -156356091 + (TATAA)n Simple_repeat Simple_repeat 4 169 0 213 125 14 42 chr5 43274105 43274177 -156355973 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 21 0 0 0 chr5 43274177 43274198 -156355952 + AT_rich Low_complexity Low_complexity 1 21 0 219 125 78 0 chr5 43274199 43274263 -156355887 + (TA)n Simple_repeat Simple_repeat 1 69 0 277 107 36 24 chr5 43274304 43274388 -156355762 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 4153 229 25 37 chr5 43274395 43275362 -156354788 + L1ME LINE L1 96 1050 -5809 * 7961 230 51 22 chr5 43275352 43277821 -156352329 + L1ME LINE L1 3477 6016 -941 390 325 36 0 chr5 43277964 43278158 -156351992 + L1ME LINE L1 6373 6573 -359 22 35 0 0 chr5 43278798 43278827 -156351323 + AT_rich Low_complexity Low_complexity 1 29 0 941 217 5 0 chr5 43279701 43279885 -156350265 - MER5A DNA MER1_type -3 186 2 2032 126 3 3 chr5 43281150 43281485 -156348665 + AluSq SINE Alu 1 313 0 520 230 96 86 chr5 43281510 43281611 -156348539 + MIR SINE MIR 52 151 -111 2350 98 3 0 chr5 43281611 43281916 -156348234 - AluSx SINE Alu -6 306 1 520 230 96 86 chr5 43281916 43282023 -156348127 + MIR SINE MIR 151 262 0 472 308 25 0 chr5 43282046 43282166 -156347984 + L2 LINE L2 3150 3272 0 878 194 46 21 chr5 43282308 43282545 -156347605 + LTR23 LTR ERV1 161 403 -34 402 300 15 8 chr5 43283002 43283132 -156347018 + MIR SINE MIR 31 161 -101 1744 184 3 10 chr5 43284267 43284577 -156345573 + AluJo SINE Alu 1 308 -4 1142 65 5 32 chr5 43284631 43284651 -156345499 + (TTTC)n Simple_repeat Simple_repeat 1 199 0 1142 65 5 32 chr5 43284651 43284836 -156345314 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1849 173 0 19 chr5 43284898 43285211 -156344939 - AluJb SINE Alu -1 311 5 288 340 100 0 chr5 43285255 43285355 -156344795 + L2 LINE L2 3163 3272 0 1085 288 32 37 chr5 43285406 43285781 -156344369 + LTR16B LTR ERVL 2 374 -90 23 0 0 0 chr5 43287031 43287054 -156343096 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr5 43287184 43287216 -156342934 + (TG)n Simple_repeat Simple_repeat 2 33 0 233 286 29 43 chr5 43287794 43287864 -156342286 + MER5A DNA MER1_type 51 119 -70 212 321 25 12 chr5 43288348 43288429 -156341721 + MIR3 SINE MIR 121 202 -6 2099 197 17 38 chr5 43289293 43289770 -156340380 - MLT1C LTR MaLR 0 467 1 1845 126 51 27 chr5 43289783 43290076 -156340074 - AluJb SINE Alu -12 300 1 188 349 36 36 chr5 43290760 43290843 -156339307 - L2 LINE L2 -2 3270 3188 188 307 34 91 chr5 43292401 43292489 -156337661 - L2 LINE L2 -89 3183 3101 237 338 150 8 chr5 43292491 43292624 -156337526 + MIR3 SINE MIR 9 160 -48 412 175 0 0 chr5 43292658 43292738 -156337412 - MER113 DNA MER1_type? -50 471 392 234 244 32 16 chr5 43292890 43293013 -156337137 - MER113 DNA MER1_type? -393 128 4 305 253 48 0 chr5 43295212 43295295 -156334855 + MIR SINE MIR 106 192 -70 2652 113 0 0 chr5 43295408 43295772 -156334378 - THE1B LTR MaLR 0 364 1 1561 71 9 0 chr5 43296161 43296371 -156333779 + L1PA7 LINE L1 5943 6154 0 270 231 0 0 chr5 43296733 43296785 -156333365 + L2 LINE L2 3221 3272 0 358 270 11 0 chr5 43297801 43297890 -156332260 - MER81 DNA DNA -24 90 1 534 236 176 7 chr5 43297907 43298055 -156332095 - MER5A DNA MER1_type -13 176 4 * 707 273 123 0 chr5 43298055 43298275 -156331875 + MIR SINE MIR 15 262 0 446 253 121 18 chr5 43298723 43298889 -156331261 + MIR SINE MIR 80 262 0 185 344 57 38 chr5 43299605 43299762 -156330388 + MIR SINE MIR 99 258 -4 614 254 68 6 chr5 43300237 43300414 -156329736 - MIR SINE MIR -65 197 10 286 358 73 28 chr5 43300838 43301017 -156329133 + MIR3 SINE MIR 19 205 -3 2112 143 0 0 chr5 43301621 43301921 -156328229 - AluSx SINE Alu -12 300 1 227 311 100 65 chr5 43301969 43302368 -156327782 + L2 LINE L2 2829 3241 -72 194 293 57 52 chr5 43302485 43302628 -156327522 - MIR SINE MIR -64 144 25 210 310 60 10 chr5 43303056 43303156 -156326994 - MER5A DNA MER1_type -5 184 80 * 319 279 53 17 chr5 43303075 43303216 -156326934 + MER5A DNA MER1_type 29 178 0 225 211 0 0 chr5 43303373 43303425 -156326725 + (TATG)n Simple_repeat Simple_repeat 3 54 0 389 129 14 0 chr5 43303525 43303595 -156326555 + (TA)n Simple_repeat Simple_repeat 2 72 0 27 81 0 0 chr5 43304597 43304659 -156325491 + AT_rich Low_complexity Low_complexity 1 62 0 35 24 0 0 chr5 43304684 43304726 -156325424 + AT_rich Low_complexity Low_complexity 1 42 0 6197 93 16 0 chr5 43306150 43307237 -156322913 - L1PA13 LINE L1 -7 6156 5083 677 229 46 102 chr5 43307785 43308156 -156321994 + LTR16A1 LTR ERVL 108 457 0 575 235 71 46 chr5 43308436 43308759 -156321391 - L1ME4a LINE L1 -16 6105 5775 2064 131 0 22 chr5 43310802 43311114 -156319036 - AluSx SINE Alu -7 305 1 1783 128 109 0 chr5 43311624 43311889 -156318261 + AluSg SINE Alu 1 294 -16 2252 88 3 7 chr5 43313273 43313567 -156316583 + AluSq SINE Alu 1 293 -20 370 299 0 0 chr5 43313574 43313671 -156316479 + L1MC4 LINE L1 6614 6710 -1332 318 241 141 55 chr5 43314198 43314488 -156315662 + Charlie4a DNA MER1_type 193 507 -1 432 263 42 0 chr5 43315979 43316074 -156314076 + L2 LINE L2 3168 3266 -6 458 342 107 16 chr5 43316261 43316571 -156313579 + L3 LINE CR1 699 1036 -541 704 302 112 65 chr5 43316660 43317378 -156312772 - L2 LINE L2 -15 3298 2311 803 149 0 0 chr5 43318054 43318195 -156311955 + L1MA5 LINE L1 6159 6299 -1 2168 121 0 7 chr5 43318670 43318968 -156311182 - AluSg SINE Alu -14 296 1 405 304 32 19 chr5 43320741 43320899 -156309251 - MIR SINE MIR -15 247 88 2101 114 27 23 chr5 43321634 43321933 -156308217 + AluSg SINE Alu 1 300 -10 309 275 288 0 chr5 43322266 43322426 -156307724 - MIR SINE MIR -46 216 11 381 285 73 67 chr5 43322807 43322986 -156307164 - MIR SINE MIR -57 205 26 678 313 83 44 chr5 43323157 43323643 -156306507 - L2 LINE L2 -845 2469 1956 1641 164 38 3 chr5 43323643 43323930 -156306220 + AluJo SINE Alu 1 297 -15 678 313 83 44 chr5 43323930 43324008 -156306142 - L2 LINE L2 -1358 1956 1883 1088 314 30 10 chr5 43324197 43324601 -156305549 - L2 LINE L2 -390 2924 2513 399 300 111 0 chr5 43324693 43324873 -156305277 - L2 LINE L2 -1577 1737 1538 1350 87 0 0 chr5 43325020 43325192 -156304958 - AluSq SINE Alu -6 307 136 1224 158 48 5 chr5 43325190 43325399 -156304751 - AluJb SINE Alu -94 218 1 * 198 294 39 39 chr5 43325414 43325516 -156304634 + L2 LINE L2 1966 2067 -1247 324 70 0 0 chr5 43325549 43325592 -156304558 + (TA)n Simple_repeat Simple_repeat 1 43 0 225 0 0 0 chr5 43325591 43325616 -156304534 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 1068 92 0 0 chr5 43325649 43325780 -156304370 - AluSq SINE Alu -182 131 1 1483 62 0 0 chr5 43326122 43326301 -156303849 - AluY SINE Alu -3 308 130 405 330 58 6 chr5 43326532 43326705 -156303445 + L3 LINE CR1 1281 1462 -115 335 313 126 42 chr5 43326726 43326940 -156303210 - MIR SINE MIR -30 232 1 315 333 121 34 chr5 43328316 43328811 -156301339 + L2 LINE L2 1932 2469 -845 2200 123 7 0 chr5 43331394 43331694 -156298456 + AluSx SINE Alu 1 302 -10 533 266 79 86 chr5 43334895 43335199 -156294951 + MLT1I LTR MaLR 82 383 -26 1042 279 77 25 chr5 43335622 43335987 -156294163 - LTR16B LTR ERVL -45 419 36 640 257 7 7 chr5 43335997 43336145 -156294005 - MIR SINE MIR -59 203 56 2295 110 0 0 chr5 43336663 43336955 -156293195 + AluSc SINE Alu 1 292 -17 351 0 0 0 chr5 43337074 43337113 -156293037 + (CA)n Simple_repeat Simple_repeat 1 39 0 523 289 34 0 chr5 43337128 43337277 -156292873 + LTR16B LTR ERVL 153 306 -158 5262 22 3 0 chr5 43337804 43338497 -156291653 - L1P2 LINE L1 -723 5432 4739 4107 44 0 0 chr5 43338497 43338996 -156291154 + L1PA4 LINE L1 5653 6152 -3 2081 124 0 7 chr5 43340156 43340455 -156289695 - AluSx SINE Alu -15 297 1 544 166 40 73 chr5 43341013 43341164 -156288986 + FRAM SINE Alu 1 146 -30 1860 117 21 7 chr5 43341682 43341964 -156288186 - AluSx SINE Alu -16 296 11 190 173 19 77 chr5 43342956 43343008 -156287142 + L2 LINE L2 3214 3262 -10 404 294 190 5 chr5 43343284 43343468 -156286682 + MIR SINE MIR 1 218 -44 35 54 0 0 chr5 43343472 43343528 -156286622 + AT_rich Low_complexity Low_complexity 1 56 0 303 291 189 8 chr5 43343573 43343700 -156286450 + MIR SINE MIR 2 151 -111 239 178 219 0 chr5 43343746 43343819 -156286331 - LTR33 LTR ERVL -9 512 424 308 263 17 42 chr5 43343954 43344072 -156286078 - LTR33 LTR ERVL -405 116 2 224 200 73 0 chr5 43344073 43344128 -156286022 + MIR SINE MIR 204 262 0 2089 271 52 54 chr5 43344488 43345636 -156284514 + L2 LINE L2 2109 3266 -47 251 299 37 0 chr5 43346314 43346421 -156283729 + MER103 DNA DNA 3 113 -53 246 221 13 65 chr5 43346526 43346603 -156283547 - MIR SINE MIR -73 189 117 1331 208 44 28 chr5 43346722 43347109 -156283041 - MLT1C LTR MaLR -12 378 9 421 328 89 32 chr5 43347644 43347749 -156282401 + MIR SINE MIR 2 100 -162 1976 128 7 0 chr5 43347749 43348031 -156282119 + AluSq SINE Alu 29 312 -1 421 328 89 32 chr5 43348031 43348172 -156281978 + MIR SINE MIR 100 262 0 377 200 0 48 chr5 43348981 43349106 -156281044 + MER113 DNA MER1_type? 65 183 -338 396 273 147 0 chr5 43349381 43349531 -156280619 + MLT1I LTR MaLR 232 403 -6 392 269 55 28 chr5 43349936 43350081 -156280069 - MIR SINE MIR -2 260 112 2256 93 22 29 chr5 43350110 43350422 -156279728 + AluSg SINE Alu 1 310 0 429 347 20 0 chr5 43351365 43351515 -156278635 + MER91A DNA MER1_type 1 153 -43 180 0 0 0 chr5 43351533 43351553 -156278597 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 1504 80 5 0 chr5 43351586 43351785 -156278365 - L1PA8 LINE L1 0 6172 5973 385 85 0 0 chr5 43351786 43351845 -156278305 + L1PA8 LINE L1 5894 5952 -220 523 300 21 52 chr5 43352187 43352514 -156277636 + MLT1K LTR MaLR 247 563 -25 480 213 0 0 chr5 43352762 43352884 -156277266 + (TA)n Simple_repeat Simple_repeat 2 123 0 301 306 85 76 chr5 43353393 43353642 -156276508 + L2 LINE L2 2732 2980 -292 185 35 69 0 chr5 43353773 43353802 -156276348 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 715 270 119 4 chr5 43353887 43354113 -156276037 + MIR SINE MIR 11 262 0 207 114 0 0 chr5 43355379 43355414 -156274736 + (TC)n Simple_repeat Simple_repeat 2 36 0 310 321 73 34 chr5 43358189 43358666 -156271484 + HAL1 LINE L1 1224 1719 -788 2006 220 51 64 chr5 43358987 43359562 -156270588 + L1ME1 LINE L1 1159 1740 -4800 1844 74 0 4 chr5 43359562 43359793 -156270357 + AluY SINE Alu 1 230 -81 2006 220 51 64 chr5 43359793 43359809 -156270341 + L1ME1 LINE L1 1740 1755 -4785 243 61 0 0 chr5 43359809 43359842 -156270308 + (CA)n Simple_repeat Simple_repeat 2 34 0 2006 220 51 64 chr5 43359842 43360030 -156270120 + L1ME1 LINE L1 1755 1929 -4611 * 4194 254 108 22 chr5 43360017 43360441 -156269709 + L1ME1 LINE L1 3533 3919 -2621 2621 52 0 3 chr5 43360441 43360751 -156269399 - AluY SINE Alu -2 309 1 4194 254 108 22 chr5 43360751 43361537 -156268613 + L1ME1 LINE L1 3919 4635 -1905 2499 55 3 3 chr5 43361537 43361845 -156268305 + AluY SINE Alu 1 308 -3 4194 254 108 22 chr5 43361845 43362717 -156267433 + L1ME1 LINE L1 4635 5797 -743 1736 225 116 58 chr5 43362723 43363393 -156266757 + L1ME1 LINE L1 5849 6557 -3 576 287 130 4 chr5 43363514 43363744 -156266406 - MIR SINE MIR -2 260 2 243 103 0 0 chr5 43364351 43364390 -156265760 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 520 148 19 0 chr5 43364527 43364635 -156265515 - L1MB1 LINE L1 0 6168 6059 2257 96 0 3 chr5 43365487 43365779 -156264371 - AluSc SINE Alu -18 291 1 1977 114 0 0 chr5 43367115 43367387 -156262763 - AluSg SINE Alu -3 307 36 654 271 83 29 chr5 43367465 43367815 -156262335 + MLT1L LTR MaLR 3 371 -244 369 239 161 15 chr5 43367859 43367989 -156262161 + MLT1L LTR MaLR 463 611 -4 545 30 0 0 chr5 43368767 43368834 -156261316 - L1PA5 LINE L1 -6 6148 6082 454 284 47 42 chr5 43370617 43370846 -156259304 + MIR SINE MIR 19 247 -15 453 61 0 184 chr5 43371037 43371135 -156259015 - MADE1 DNA Mariner 0 80 1 3300 180 23 73 chr5 43371323 43372149 -156258001 + LTR1 LTR ERV1 1 785 0 360 299 31 8 chr5 43372178 43372305 -156257845 - MIR SINE MIR 0 262 133 359 265 106 44 chr5 43373856 43374114 -156256036 - MER110A LTR ERV1 0 468 229 425 310 55 7 chr5 43375233 43375378 -156254772 + MIR SINE MIR 83 234 -28 25 75 0 0 chr5 43375396 43375449 -156254701 + AT_rich Low_complexity Low_complexity 1 53 0 24 77 0 0 chr5 43377069 43377121 -156253029 + AT_rich Low_complexity Low_complexity 1 52 0 586 283 35 0 chr5 43377174 43377347 -156252803 + MIR SINE MIR 54 232 -30 251 149 43 0 chr5 43377357 43377404 -156252746 - MIR SINE MIR -31 231 183 30 0 0 0 chr5 43377404 43377434 -156252716 + AT_rich Low_complexity Low_complexity 1 30 0 2080 112 0 0 chr5 43377453 43377730 -156252420 - AluSq SINE Alu 0 313 37 495 0 0 0 chr5 43377777 43377832 -156252318 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 248 0 31 0 chr5 43377836 43377868 -156252282 + (GA)n Simple_repeat Simple_repeat 2 34 0 7782 157 22 20 chr5 43378425 43384685 -156245465 - L1PA10 LINE L1 0 6483 4 457 310 182 5 chr5 43384897 43385100 -156245050 - MIR SINE MIR -9 253 15 519 281 39 39 chr5 43385433 43385611 -156244539 + MER5A DNA MER1_type 12 189 0 363 287 93 20 chr5 43385626 43385776 -156244374 + MER5B DNA MER1_type 8 168 -10 334 290 95 9 chr5 43386042 43386273 -156243877 - L1ME4a LINE L1 -96 6025 5775 2086 98 0 64 chr5 43386456 43386632 -156243518 - AluSg1 SINE Alu -2 307 160 2309 71 3 0 chr5 43386632 43386928 -156243222 - AluY SINE Alu -14 297 1 2086 98 0 64 chr5 43386928 43387079 -156243071 - AluSg1 SINE Alu -149 160 1 2102 126 3 7 chr5 43387374 43387667 -156242483 - AluSx SINE Alu -15 297 6 418 292 59 42 chr5 43387704 43387940 -156242210 - L1ME4a LINE L1 -869 5277 5038 221 246 0 0 chr5 43388183 43388240 -156241910 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 1789 174 112 45 chr5 43388257 43388729 -156241421 - MLT1D LTR MaLR -1 504 1 40 0 0 0 chr5 43388804 43388844 -156241306 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 43389600 43389622 -156240528 + AT_rich Low_complexity Low_complexity 1 22 0 2430 186 12 47 chr5 43389756 43390381 -156239769 - L1MC1 LINE L1 0 6333 5776 1481 194 150 9 chr5 43390381 43390727 -156239423 - MSTD LTR MaLR -1 395 1 2430 186 12 47 chr5 43390727 43391310 -156238840 - L1MC1 LINE L1 -557 5776 5175 344 277 94 35 chr5 43392409 43392611 -156237539 + ERVL LTR ERVL 1926 2139 -3625 2127 98 18 0 chr5 43392883 43393169 -156236981 + AluSp SINE Alu 13 303 -10 399 252 84 7 chr5 43393186 43393329 -156236821 - MIR SINE MIR -56 206 53 186 263 85 51 chr5 43393392 43393417 -156236733 - L2 LINE L2 -1879 1435 1412 189 0 0 0 chr5 43393417 43393438 -156236712 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 186 263 85 51 chr5 43393438 43393530 -156236620 - L2 LINE L2 -1902 1412 1314 490 306 28 22 chr5 43393550 43393667 -156236483 + MER5A DNA MER1_type 9 129 -60 2169 68 26 0 chr5 43393667 43393933 -156236217 - AluY SINE Alu -14 297 25 490 306 28 22 chr5 43393933 43393995 -156236155 + MER5A DNA MER1_type 129 189 0 410 307 59 12 chr5 43394151 43394481 -156235669 + MLT1L LTR MaLR 202 607 -8 180 357 152 34 chr5 43394670 43394998 -156235152 - L2 LINE L2 -2281 1033 667 307 324 81 49 chr5 43395059 43395244 -156234906 - L2 LINE L2 -216 3056 2866 2237 56 0 28 chr5 43395376 43395660 -156234490 - AluY SINE Alu 0 311 36 694 127 43 0 chr5 43395704 43395916 -156234234 + CT-rich Low_complexity Low_complexity 1 221 0 811 168 6 6 chr5 43396099 43396176 -156233974 + CT-rich Low_complexity Low_complexity 3 79 -96 2022 127 10 7 chr5 43396176 43396483 -156233667 - AluSx SINE Alu -4 308 1 811 168 6 6 chr5 43396483 43396531 -156233619 + CT-rich Low_complexity Low_complexity 79 126 -49 2251 88 3 16 chr5 43396531 43396836 -156233314 - AluY SINE Alu -6 305 5 811 168 6 6 chr5 43396836 43396882 -156233268 + CT-rich Low_complexity Low_complexity 125 175 0 304 146 0 0 chr5 43396882 43396930 -156233220 + (TTTC)n Simple_repeat Simple_repeat 4 51 0 400 208 13 0 chr5 43397489 43397566 -156232584 + MER67A LTR ERV1 11 88 -455 819 233 112 75 chr5 43397686 43398066 -156232084 + MER67B LTR ERV1 83 350 -335 2369 107 0 0 chr5 43398066 43398375 -156231775 + AluSg1 SINE Alu 1 309 0 819 233 112 75 chr5 43398375 43398431 -156231719 + MER67B LTR ERV1 350 403 -282 * 915 244 19 26 chr5 43398400 43398671 -156231479 + MER67A LTR ERV1 275 543 0 2268 92 0 7 chr5 43401008 43401312 -156228838 - AluSx SINE Alu -10 302 1 244 206 95 0 chr5 43401325 43401388 -156228762 + MIR3 SINE MIR 137 205 -3 2051 130 7 3 chr5 43401787 43402086 -156228064 - AluSq SINE Alu -13 300 1 315 293 14 71 chr5 43402365 43402662 -156227488 - MER97c DNA MER1_type? -42 1048 769 24 0 0 0 chr5 43402812 43402836 -156227314 + AT_rich Low_complexity Low_complexity 1 24 0 2073 113 7 3 chr5 43402848 43403140 -156227010 + AluSg SINE Alu 12 304 -6 790 153 39 74 chr5 43403188 43403378 -156226772 - L1MC3 LINE L1 -11 7774 7592 2263 81 3 13 chr5 43403378 43403688 -156226462 - AluY SINE Alu -4 307 1 790 153 39 74 chr5 43403688 43403726 -156226424 - L1MC3 LINE L1 -193 7592 7554 286 150 9 168 chr5 43403868 43403981 -156226169 + MER97c DNA MER1_type? 454 548 -542 929 211 76 40 chr5 43403981 43404284 -156225866 - MER97b DNA MER1_type? -657 396 83 2061 109 29 0 chr5 43404294 43404607 -156225543 - L1PB2 LINE L1 -2 6149 5828 1155 188 0 0 chr5 43404680 43404887 -156225263 + MER52A LTR ERV1 1278 1484 -271 2532 104 60 52 chr5 43404890 43404968 -156225182 - L1PB2 LINE L1 -312 5839 5763 2158 108 3 43 chr5 43404968 43405292 -156224858 - AluSx SINE Alu -1 311 1 2532 104 60 52 chr5 43405292 43405693 -156224457 - L1PB2 LINE L1 -388 5763 5356 5912 181 156 55 chr5 43406090 43407679 -156222471 - MER52A LTR ERV1 0 1755 7 2084 150 7 3 chr5 43408694 43409001 -156221149 - AluSx SINE Alu -2 310 3 268 298 36 0 chr5 43409284 43409368 -156220782 - MIR SINE MIR -112 150 64 955 292 121 15 chr5 43409573 43410075 -156220075 + MLT1G1 LTR MaLR 24 582 -13 405 287 15 55 chr5 43410988 43411105 -156219045 - LTR16C LTR ERVL -18 473 366 2159 135 30 28 chr5 43411105 43411467 -156218683 - THE1B LTR MaLR -1 363 1 405 287 15 55 chr5 43411467 43411551 -156218599 - LTR16C LTR ERVL -125 366 280 26 0 0 0 chr5 43412033 43412059 -156218091 + AT_rich Low_complexity Low_complexity 1 26 0 2470 54 0 17 chr5 43412130 43412427 -156217723 + AluY SINE Alu 3 294 -17 705 265 85 13 chr5 43412674 43412980 -156217170 - MER45B DNA AcHobo 0 1040 713 512 285 4 32 chr5 43413050 43413288 -156216862 - MER45C DNA AcHobo -178 775 495 315 65 0 0 chr5 43413307 43413353 -156216797 - MADE1 DNA Mariner 0 80 35 681 343 120 9 chr5 43413666 43414098 -156216052 + L3 LINE CR1 1008 1487 -90 1620 216 120 2 chr5 43414244 43414660 -156215490 - MLT1C LTR MaLR 0 467 3 236 370 10 0 chr5 43414687 43414787 -156215363 + MIR SINE MIR 47 147 -61 210 37 0 0 chr5 43415120 43415147 -156215003 + (CA)n Simple_repeat Simple_repeat 2 28 0 2557 206 29 32 chr5 43415470 43415890 -156214260 + L1MB8 LINE L1 4666 5086 -1098 240 35 0 0 chr5 43415890 43415919 -156214231 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2557 206 29 32 chr5 43415919 43415931 -156214219 + L1MB8 LINE L1 5086 5097 -1087 2356 158 36 32 chr5 43415931 43416436 -156213714 - L1MA7 LINE L1 -3 6288 5782 2557 206 29 32 chr5 43416436 43416913 -156213237 + L1MB8 LINE L1 5097 5569 -615 2382 90 0 3 chr5 43416913 43417213 -156212937 + AluSc SINE Alu 1 299 -10 2557 206 29 32 chr5 43417213 43417473 -156212677 + L1MB8 LINE L1 5569 5828 -356 899 199 0 6 chr5 43417475 43417636 -156212514 - MER8 DNA MER2_type -1 238 79 1795 183 0 19 chr5 43417674 43418040 -156212110 + L1MB8 LINE L1 5818 6176 -2 208 350 72 0 chr5 43418106 43418203 -156211947 - L2 LINE L2 -236 3036 2933 480 207 95 99 chr5 43418230 43418452 -156211698 + MLT1E1 LTR MaLR 1 221 -433 244 284 0 0 chr5 43419280 43419361 -156210789 + T-rich Low_complexity Low_complexity 1 81 0 3298 179 82 10 chr5 43419372 43420055 -156210095 - MER44D DNA MER2_type 0 605 2 1610 164 124 13 chr5 43420551 43420972 -156209178 + MLT2B2 LTR ERVL 1 515 0 30 0 0 0 chr5 43421059 43421089 -156209061 + AT_rich Low_complexity Low_complexity 1 30 0 321 276 52 30 chr5 43422868 43423002 -156207148 + MIR SINE MIR 33 169 -93 213 333 46 35 chr5 43422991 43423078 -156207072 + L2 LINE L2 3146 3233 -39 * 26 64 0 0 chr5 43423138 43423185 -156206965 + AT_rich Low_complexity Low_complexity 1 47 0 1305 118 35 0 chr5 43423289 43423492 -156206658 + MER2 DNA MER2_type 1 210 -135 200 259 19 37 chr5 43424635 43424689 -156205461 + L3 LINE CR1 1514 1566 -11 1055 252 5 0 chr5 43424694 43424916 -156205234 - MER58A DNA MER1_type -1 223 1 25 0 0 0 chr5 43425092 43425117 -156205033 + AT_rich Low_complexity Low_complexity 1 25 0 1127 303 24 0 chr5 43425336 43425709 -156204441 + MLT1J LTR MaLR 1 382 -129 228 275 125 25 chr5 43426400 43426480 -156203670 - L2 LINE L2 -1 3271 3184 257 324 0 0 chr5 43426597 43426665 -156203485 + MER110-int LTR ERV1 3810 3877 -2924 747 322 31 44 chr5 43426753 43427337 -156202813 + MER110-int LTR ERV1 2102 2692 -4845 434 34 34 0 chr5 43427337 43427396 -156202754 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 747 322 31 44 chr5 43427396 43428143 -156202007 + MER110-int LTR ERV1 2692 6137 -1400 1824 129 0 66 chr5 43428228 43428565 -156201585 + AluSq SINE Alu 1 317 0 3148 149 19 0 chr5 43429163 43429693 -156200457 - L1PA16 LINE L1 0 6166 5627 1170 148 10 1 chr5 43429693 43429934 -156200216 + L1 LINE L1 5177 5420 -743 1471 165 22 41 chr5 43430032 43430347 -156199803 + MER39 LTR ERV1 395 703 -4 353 247 0 10 chr5 43430372 43430469 -156199681 + MER57A LTR ERV1 302 397 -6 203 371 57 44 chr5 43430557 43430805 -156199345 + L2 LINE L2 2804 3054 -218 1617 154 65 31 chr5 43431653 43432004 -156198146 + THE1C LTR MaLR 1 363 -12 470 349 89 7 chr5 43432059 43432328 -156197822 - L2 LINE L2 -362 2952 2662 255 214 51 20 chr5 43432469 43432567 -156197583 + (TAAAG)n Simple_repeat Simple_repeat 3 103 0 528 301 89 37 chr5 43433351 43433597 -156196553 - MIR SINE MIR -1 261 3 2066 130 3 3 chr5 43434225 43434517 -156195633 - AluSg SINE Alu -18 292 1 2261 110 0 10 chr5 43434647 43434957 -156195193 - AluSx SINE Alu -5 307 1 289 378 28 7 chr5 43435109 43435252 -156194898 + MIR3 SINE MIR 32 177 -31 357 348 22 0 chr5 43435949 43436087 -156194063 - MIR SINE MIR -65 197 57 1202 176 100 25 chr5 43436947 43437186 -156192964 - AluJo SINE Alu -55 257 1 5683 81 0 116 chr5 43437589 43438523 -156191627 - LTR12 LTR ERV1 0 826 1 1613 100 0 8 chr5 43438649 43438899 -156191251 - HUERS-P3b LTR ERV1 -2458 4960 4713 746 73 0 0 chr5 43438890 43438986 -156191164 - HUERS-P3b LTR ERV1 -3544 3874 3779 * 5093 65 24 1 chr5 43438986 43439786 -156190364 + HUERS-P3 LTR ERV1 4928 5822 -1596 1271 91 5 16 chr5 43439785 43439971 -156190179 + HUERS-P3 LTR ERV1 5961 6144 -1274 * 1287 144 0 0 chr5 43439969 43440171 -156189979 + HUERS-P3 LTR ERV1 8717 8918 -1 2278 137 46 14 chr5 43440171 43440686 -156189464 + LTR9B LTR ERV1 1 560 -84 237 151 0 0 chr5 43440686 43440739 -156189411 + A-rich Low_complexity Low_complexity 1 53 0 538 317 28 0 chr5 43441903 43442045 -156188105 - L2 LINE L2 0 3313 3168 22 56 0 0 chr5 43443218 43443254 -156186896 + AT_rich Low_complexity Low_complexity 1 36 0 3874 191 41 31 chr5 43443477 43443971 -156186179 + L1MB2 LINE L1 4981 5468 -703 188 33 0 33 chr5 43443971 43444001 -156186149 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3874 191 41 31 chr5 43444001 43444345 -156185805 + L1MB2 LINE L1 5468 5807 -364 2199 109 0 0 chr5 43444345 43444663 -156185487 + AluSq SINE Alu 1 318 0 3874 191 41 31 chr5 43444663 43444996 -156185154 + L1MB2 LINE L1 5807 6168 -3 23 0 0 0 chr5 43445633 43445656 -156184494 + AT_rich Low_complexity Low_complexity 1 23 0 1452 198 61 61 chr5 43446117 43446577 -156183573 + MER31B LTR ERV1 1 460 -6 2431 147 57 2 chr5 43446585 43446990 -156183160 - LOR1b LTR ERV1 0 461 29 213 39 0 0 chr5 43446990 43447016 -156183134 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2431 147 57 2 chr5 43447016 43447047 -156183103 - LOR1b LTR ERV1 -432 29 1 1478 207 27 20 chr5 43447457 43447752 -156182398 - AluJo SINE Alu -9 303 7 916 244 30 0 chr5 43447775 43447976 -156182174 + MER58A DNA MER1_type 4 210 -14 1078 207 304 40 chr5 43449315 43449548 -156180602 + MER52A LTR ERV1 3 173 -1582 1752 125 33 7 chr5 43449548 43449820 -156180330 + AluSq SINE Alu 27 305 -8 1078 207 304 40 chr5 43449820 43450040 -156180110 + MER52A LTR ERV1 173 1231 -524 319 164 0 189 chr5 43450113 43450272 -156179878 + MER52A LTR ERV1 1221 1349 -406 * 440 203 30 38 chr5 43450261 43450394 -156179756 + LTR28 LTR ERV1 585 716 -304 * 1496 232 51 62 chr5 43450374 43450921 -156179229 + MER52A LTR ERV1 1213 1753 -2 217 254 17 0 chr5 43450971 43451030 -156179120 + A-rich Low_complexity Low_complexity 4 63 0 538 231 88 65 chr5 43451175 43451468 -156178682 - Charlie7 DNA MER1_type -388 2224 1925 1058 217 278 15 chr5 43451468 43451515 -156178635 - MLT2B1 LTR ERVL -2 518 485 1966 146 18 15 chr5 43451515 43451858 -156178292 + MER2 DNA MER2_type 1 344 0 1058 217 278 15 chr5 43451858 43452103 -156178047 - MLT2B1 LTR ERVL -35 485 306 2829 13 0 6 chr5 43452103 43452420 -156177730 + AluYb8 SINE Alu 1 315 -3 1058 217 278 15 chr5 43452420 43452536 -156177614 - MLT2B1 LTR ERVL -214 306 1 562 286 18 9 chr5 43452553 43452773 -156177377 - Charlie7 DNA MER1_type -706 1906 1685 335 113 0 50 chr5 43452878 43452958 -156177192 + (TA)n Simple_repeat Simple_repeat 1 76 0 438 236 81 47 chr5 43452958 43453315 -156176835 - Charlie7 DNA MER1_type -2168 444 8 204 300 0 43 chr5 43453369 43453439 -156176711 + MER5A DNA MER1_type 59 125 -64 979 256 50 20 chr5 43454113 43454410 -156175740 + MLT1J2 LTR MaLR 3 308 -142 414 248 38 0 chr5 43454927 43455060 -156175090 - L1MC4 LINE L1 -400 7642 7505 261 191 234 7 chr5 43455183 43455324 -156174826 - L1ME4a LINE L1 -153 5968 5796 2043 94 7 10 chr5 43455324 43455623 -156174527 - L1PB1 LINE L1 -1 6150 5853 346 302 102 25 chr5 43457647 43457958 -156172192 - MLT1J LTR MaLR -130 381 1 356 343 65 12 chr5 43457976 43458145 -156172005 + MIR SINE MIR 82 259 -3 1410 303 70 20 chr5 43458595 43459193 -156170957 - MLT2E LTR ERVL 0 628 1 24 53 0 0 chr5 43459270 43459308 -156170842 + AT_rich Low_complexity Low_complexity 1 38 0 612 272 72 79 chr5 43459328 43459799 -156170351 + LTR37B LTR ERV1 1 468 0 810 210 119 18 chr5 43460384 43460603 -156169547 - MLT1D LTR MaLR -264 241 1 226 198 21 19 chr5 43461128 43461191 -156168959 + MIR SINE MIR 92 144 -64 21 0 0 0 chr5 43461818 43461839 -156168311 + AT_rich Low_complexity Low_complexity 1 21 0 421 335 35 13 chr5 43462442 43462672 -156167478 + MER110 LTR ERV1 257 491 0 1969 113 88 0 chr5 43462895 43463178 -156166972 - AluSq SINE Alu -1 312 5 1922 156 3 10 chr5 43463194 43463508 -156166642 - AluJb SINE Alu 0 312 1 299 293 32 49 chr5 43463520 43463643 -156166507 - MIR SINE MIR -110 152 32 312 111 0 0 chr5 43464313 43464367 -156165783 + (GA)n Simple_repeat Simple_repeat 1 54 0 494 246 25 17 chr5 43464612 43464730 -156165420 - AluJo SINE Alu -109 203 85 2239 141 0 0 chr5 43465616 43465928 -156164222 + AluSx SINE Alu 1 312 0 31 0 0 0 chr5 43466584 43466615 -156163535 + AT_rich Low_complexity Low_complexity 1 31 0 2241 94 0 7 chr5 43467012 43467310 -156162840 + AluSq SINE Alu 1 296 -17 883 336 55 22 chr5 43468509 43468911 -156161239 + L2 LINE L2 133 547 -2767 1784 179 24 15 chr5 43469336 43469676 -156160474 - MER2 DNA MER2_type 0 344 2 634 228 0 37 chr5 43470112 43470248 -156159902 - FLAM_A SINE Alu 0 133 3 1185 193 22 58 chr5 43470509 43470820 -156159330 + L1MB2 LINE L1 4070 4369 -1777 3057 196 34 17 chr5 43470820 43471531 -156158619 + L1MB2 LINE L1 5447 6169 -2 2200 90 3 10 chr5 43471596 43471895 -156158255 + AluY SINE Alu 2 298 -13 39641 56 10 1 chr5 43472063 43478155 -156151995 - L1PA5 LINE L1 -5 6149 1 393 183 0 0 chr5 43478414 43478496 -156151654 - L1MC2 LINE L1 -132 6212 6131 * 477 214 29 29 chr5 43478495 43478635 -156151515 + L1MC2 LINE L1 6197 6336 -8 2499 70 0 0 chr5 43480365 43480665 -156149485 - AluY SINE Alu -11 300 1 198 368 0 0 chr5 43480864 43480921 -156149229 - L2 LINE L2 -33 3239 3183 553 291 109 18 chr5 43481081 43481356 -156148794 - LTR16A LTR ERVL -148 302 3 256 276 70 96 chr5 43481972 43482273 -156147877 - HERV16 LTR ERVL -548 4448 4156 310 350 29 29 chr5 43482563 43482872 -156147278 - HERV16 LTR ERVL -1509 4145 3837 385 327 13 0 chr5 43482888 43483044 -156147106 - HERV16 LTR ERVL -2727 2269 2112 30 59 0 0 chr5 43485919 43485970 -156144180 + AT_rich Low_complexity Low_complexity 1 51 0 253 357 80 0 chr5 43487289 43487401 -156142749 - MIR SINE MIR -67 141 21 651 267 104 59 chr5 43488237 43488574 -156141576 - L2 LINE L2 -12 3301 2950 468 307 97 64 chr5 43488607 43489092 -156141058 - L2 LINE L2 -443 2871 2371 583 338 84 10 chr5 43489098 43489394 -156140756 - L2 LINE L2 -8 3305 2988 1673 302 90 51 chr5 43489444 43489658 -156140492 - L2 LINE L2 -1022 2292 2088 2352 110 0 0 chr5 43489658 43489966 -156140184 + AluSc SINE Alu 1 308 -1 1673 302 90 51 chr5 43489966 43490250 -156139900 - L2 LINE L2 -1226 2088 1817 288 0 0 0 chr5 43490250 43490282 -156139868 + (TG)n Simple_repeat Simple_repeat 1 32 0 1673 302 90 51 chr5 43490282 43491147 -156139003 - L2 LINE L2 -1497 1817 836 2200 141 0 0 chr5 43491459 43491771 -156138379 - AluSx SINE Alu 0 312 1 1033 218 15 10 chr5 43492657 43492863 -156137287 + AluJb SINE Alu 85 291 -21 24 32 0 0 chr5 43493222 43493253 -156136897 + AT_rich Low_complexity Low_complexity 1 31 0 2374 82 7 0 chr5 43493514 43493819 -156136331 + AluSc SINE Alu 1 307 -2 24 0 0 0 chr5 43495109 43495133 -156135017 + AT_rich Low_complexity Low_complexity 1 24 0 1136 178 49 13 chr5 43495180 43495405 -156134745 - MER46A DNA MER2_type -3 233 1 673 251 87 19 chr5 43495776 43495983 -156134167 - MIR SINE MIR -5 257 37 4484 122 55 87 chr5 43498256 43498456 -156131694 - L1MA9 LINE L1 -6 6306 6101 310 102 41 0 chr5 43498456 43498505 -156131645 - MADE1 DNA Mariner -29 51 1 315 0 0 0 chr5 43498505 43498540 -156131610 + (TTA)n Simple_repeat Simple_repeat 1 35 0 4484 122 55 87 chr5 43498540 43499245 -156130905 - L1MA9 LINE L1 -209 6103 5382 2501 223 35 20 chr5 43499242 43499898 -156130252 + L1MA9 LINE L1 4738 5403 -743 * 25 31 0 0 chr5 43501014 43501046 -156129104 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr5 43501369 43501392 -156128758 + AT_rich Low_complexity Low_complexity 1 23 0 375 271 85 27 chr5 43501509 43501697 -156128453 - HAL1 LINE L1 -124 2383 2185 840 231 138 80 chr5 43501910 43502631 -156127519 + L1ME LINE L1 4529 5321 -843 2118 80 42 0 chr5 43502631 43502918 -156127232 - AluSc SINE Alu -5 304 6 840 231 138 80 chr5 43502918 43503130 -156127020 + L1ME LINE L1 5321 5519 -645 544 255 34 0 chr5 43503278 43503427 -156126723 - LTR33 LTR ERVL -365 156 3 26 0 0 0 chr5 43504149 43504175 -156125975 + AT_rich Low_complexity Low_complexity 1 26 0 7102 113 14 44 chr5 43504227 43505386 -156124764 - Tigger1 DNA MER2_type -4 2414 1291 7332 158 24 18 chr5 43508403 43509705 -156120445 - Tigger1 DNA MER2_type -1109 1309 1 283 301 38 49 chr5 43509747 43509930 -156120220 - L1ME LINE L1 -420 5701 5521 288 358 114 46 chr5 43510032 43510596 -156119554 + L2 LINE L2 2496 3088 -225 702 284 143 39 chr5 43510755 43511244 -156118906 + Charlie2a DNA MER1_type 326 865 -1997 34 65 0 0 chr5 43511849 43511911 -156118239 + AT_rich Low_complexity Low_complexity 1 62 0 1472 169 117 4 chr5 43512230 43512496 -156117654 + AluSx SINE Alu 1 296 -16 227 333 99 7 chr5 43513049 43513190 -156116960 + MIR3 SINE MIR 38 191 -17 308 171 0 26 chr5 43513538 43513614 -156116536 - L1MB7 LINE L1 -2 6182 6109 951 272 99 35 chr5 43514327 43514895 -156115255 + L1M4 LINE L1 1508 2159 -4485 1395 259 128 7 chr5 43514974 43515775 -156114375 + L1M4 LINE L1 2346 3232 -3412 245 221 16 98 chr5 43515777 43515899 -156114251 + L1M4 LINE L1 5028 5139 -1505 1814 76 34 11 chr5 43516058 43516322 -156113828 - AluY SINE Alu -41 270 1 2254 92 0 3 chr5 43517822 43518125 -156112025 - AluY SINE Alu -9 302 1 2048 53 7 25 chr5 43518751 43519036 -156111114 + L1P LINE L1 4 283 -5863 14547 43 68 4 chr5 43519163 43521045 -156109105 - L1P LINE L1 -3762 2384 383 658 249 84 4 chr5 43521176 43521483 -156108667 - L1M4 LINE L1 -5143 1399 1070 436 105 186 0 chr5 43521487 43521573 -156108577 - AluSg/x SINE Alu 0 312 211 284 333 8 16 chr5 43521789 43521912 -156108238 - L1M4 LINE L1 -5668 874 753 257 0 30 0 chr5 43522176 43522209 -156107941 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 230 250 78 55 chr5 43522322 43522450 -156107700 - L1M4 LINE L1 -6304 238 108 309 133 0 0 chr5 43522453 43522498 -156107652 + MER85 DNA T2_type 95 139 0 21 0 0 0 chr5 43522621 43522642 -156107508 + AT_rich Low_complexity Low_complexity 1 21 0 2467 124 11 102 chr5 43522927 43523396 -156106754 - MSTA LTR MaLR 0 428 3 779 176 0 0 chr5 43523816 43523952 -156106198 + FLAM_C SINE Alu 8 143 0 384 262 103 0 chr5 43524152 43524259 -156105891 - MIR SINE MIR -88 174 57 21 36 0 0 chr5 43524293 43524321 -156105829 + AT_rich Low_complexity Low_complexity 1 28 0 2174 115 7 0 chr5 43524333 43524629 -156105521 + AluSg SINE Alu 3 300 -10 205 106 21 43 chr5 43524668 43524715 -156105435 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 24 0 0 0 chr5 43526090 43526114 -156104036 + AT_rich Low_complexity Low_complexity 1 24 0 679 240 258 0 chr5 43526162 43526276 -156103874 - L1MD2 LINE L1 -97 6262 6179 207 0 0 0 chr5 43526276 43526299 -156103851 + (TG)n Simple_repeat Simple_repeat 2 24 0 679 240 258 0 chr5 43526299 43526455 -156103695 - L1MD2 LINE L1 -180 6179 5922 618 313 83 13 chr5 43526750 43527050 -156103100 + Charlie2 DNA MER1_type 1 321 -2461 2652 232 46 24 chr5 43527057 43527869 -156102281 + Charlie2 DNA MER1_type 1857 2695 -167 1020 201 55 109 chr5 43527869 43528253 -156101897 - MLT1A1 LTR MaLR -2 363 1 2652 232 46 24 chr5 43528253 43528391 -156101759 + Charlie2 DNA MER1_type 2695 2828 -34 28 0 0 0 chr5 43528518 43528546 -156101604 + AT_rich Low_complexity Low_complexity 1 28 0 1085 140 5 42 chr5 43528688 43528796 -156101354 - MSTB1 LTR MaLR 0 432 333 1763 139 78 36 chr5 43528796 43529156 -156100994 + THE1C LTR MaLR 1 375 0 1085 140 5 42 chr5 43529156 43529240 -156100910 - MSTB1 LTR MaLR -99 333 247 540 161 0 0 chr5 43529247 43529334 -156100816 - AluJ/FLAM SINE Alu -225 87 1 1039 204 53 41 chr5 43529334 43529579 -156100571 - MSTB1 LTR MaLR -184 248 1 29 47 0 0 chr5 43529735 43529778 -156100372 + AT_rich Low_complexity Low_complexity 1 43 0 6476 241 64 69 chr5 43529888 43530536 -156099614 + L1M4c LINE L1 11 661 -5723 1539 205 28 3 chr5 43530536 43530824 -156099326 + AluJo SINE Alu 1 295 -17 1503 196 3 29 chr5 43530824 43531136 -156099014 + AluJo SINE Alu 1 304 -8 6476 241 64 69 chr5 43531136 43532435 -156097715 + L1M4c LINE L1 660 1947 -4437 2285 137 17 3 chr5 43532435 43532794 -156097356 + THE1B LTR MaLR 1 364 0 6476 241 64 69 chr5 43532794 43533281 -156096869 + L1M4c LINE L1 1947 2435 -3949 394 278 216 6 chr5 43533443 43533605 -156096545 - MIR SINE MIR 0 262 67 21 0 0 0 chr5 43534315 43534336 -156095814 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr5 43534474 43534503 -156095647 + AT_rich Low_complexity Low_complexity 1 29 0 407 141 207 83 chr5 43535148 43535220 -156094930 + L1MB2 LINE L1 6033 6095 -76 2349 99 0 0 chr5 43535220 43535522 -156094628 + AluSq SINE Alu 1 302 -11 407 141 207 83 chr5 43535522 43535570 -156094580 + L1MB2 LINE L1 6095 6168 -3 416 245 0 31 chr5 43535743 43535841 -156094309 + L2 LINE L2 3202 3296 -17 23 54 0 0 chr5 43535882 43535919 -156094231 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr5 43535987 43536007 -156094143 + (T)n Simple_repeat Simple_repeat 1 20 0 2227 116 7 0 chr5 43536267 43536577 -156093573 + AluSq SINE Alu 2 313 0 525 273 104 44 chr5 43536897 43537281 -156092869 - Zaphod DNA AcHobo -10 4021 3615 372 158 75 68 chr5 43537301 43537579 -156092571 - Zaphod DNA AcHobo -3046 985 706 23 0 0 0 chr5 43538162 43538185 -156091965 + AT_rich Low_complexity Low_complexity 1 23 0 184 316 35 18 chr5 43540234 43540291 -156089859 + MIR SINE MIR 21 78 -184 423 38 0 0 chr5 43540300 43540353 -156089797 + (TG)n Simple_repeat Simple_repeat 2 54 0 216 302 179 9 chr5 43540354 43540460 -156089690 + MIR SINE MIR 129 252 -10 2231 101 3 3 chr5 43540503 43540811 -156089339 + AluSx SINE Alu 1 308 -4 314 304 9 9 chr5 43540924 43541039 -156089111 + GA-rich Low_complexity Low_complexity 2 116 0 227 170 0 19 chr5 43541363 43541416 -156088734 + (TTA)n Simple_repeat Simple_repeat 1 52 0 3513 244 57 15 chr5 43541462 43542724 -156087426 + L1MCb LINE L1 1 1317 -4849 527 250 86 0 chr5 43542812 43542952 -156087198 + FRAM SINE Alu 1 152 -14 28 0 0 0 chr5 43542955 43542983 -156087167 + AT_rich Low_complexity Low_complexity 1 28 0 1237 246 85 14 chr5 43543072 43543438 -156086712 + L1M4 LINE L1 3718 4109 -2037 243 0 0 0 chr5 43543439 43543466 -156086684 + (A)n Simple_repeat Simple_repeat 1 27 0 478 271 0 0 chr5 43543476 43543583 -156086567 - FLAM_A SINE Alu -26 116 10 284 258 0 0 chr5 43543589 43543655 -156086495 + L1M4 LINE L1 4097 4162 -1984 280 243 63 9 chr5 43543924 43544035 -156086115 - L1MC4 LINE L1 -824 7218 7102 585 263 0 0 chr5 43544117 43544235 -156085915 - MER45C DNA AcHobo -835 118 1 611 261 8 8 chr5 43545038 43545168 -156084982 + MER45A DNA AcHobo 11 140 -38 2445 73 0 6 chr5 43545218 43545531 -156084619 + AluY SINE Alu 1 311 0 1396 178 44 18 chr5 43546632 43546907 -156083243 - MLT1C LTR MaLR -183 284 3 2567 193 13 28 chr5 43547652 43548187 -156081963 - L1PA16 LINE L1 -1 6165 5639 * 4056 202 13 13 chr5 43548184 43549083 -156081067 + L1 LINE L1 4066 4964 -1182 2536 68 3 0 chr5 43549097 43549406 -156080744 - AluSp SINE Alu -3 310 1 782 231 118 25 chr5 43549406 43549832 -156080318 - Charlie2 DNA MER1_type -386 2476 2008 366 181 0 0 chr5 43549831 43549903 -156080247 + Charlie2 DNA MER1_type 1938 2009 -853 * 23 0 0 0 chr5 43550595 43550618 -156079532 + AT_rich Low_complexity Low_complexity 1 23 0 1898 126 42 3 chr5 43551061 43551347 -156078803 + AluSx SINE Alu 1 297 -15 284 288 131 50 chr5 43551363 43551411 -156078739 + MIR3 SINE MIR 4 47 -161 1641 198 33 17 chr5 43551411 43551567 -156078583 - MLT1A1 LTR MaLR 0 365 213 1832 166 31 0 chr5 43551567 43551856 -156078294 - AluSx SINE Alu -14 298 1 1641 198 33 17 chr5 43551856 43552058 -156078092 - MLT1A1 LTR MaLR -152 213 1 284 288 131 50 chr5 43552058 43552169 -156077981 + MIR3 SINE MIR 47 176 -32 270 248 40 84 chr5 43552502 43552704 -156077446 - HAL1b LINE L1 -3 1345 1153 5127 143 21 13 chr5 43552755 43553626 -156076524 - L1PA15 LINE L1 -6 6159 5282 511 283 21 11 chr5 43553733 43553924 -156076226 - HAL1b LINE L1 -630 718 526 428 358 51 32 chr5 43554097 43554410 -156075740 - HAL1b LINE L1 -927 421 103 342 357 94 9 chr5 43555830 43556054 -156074096 - L1MC4a LINE L1 -1734 6074 5832 4017 114 15 5 chr5 43556070 43556684 -156073466 - L1PA13 LINE L1 -6 6157 5538 728 94 0 0 chr5 43556684 43556780 -156073370 + L1PA12 LINE L1 6 101 -7480 248 304 120 0 chr5 43556778 43556903 -156073247 - L1MC4a LINE L1 -1985 5823 5684 * 524 257 61 37 chr5 43556920 43557044 -156073106 - L1MC4a LINE L1 -2239 5569 5436 3316 176 7 10 chr5 43557044 43557651 -156072499 - MER6A DNA MER2_type 0 605 1 524 257 61 37 chr5 43557651 43557740 -156072410 - L1MC4a LINE L1 -2372 5436 5351 557 106 0 0 chr5 43559022 43559107 -156071043 + Alu SINE Alu 225 309 0 531 351 144 3 chr5 43559107 43559497 -156070653 - L2 LINE L2 -1494 1820 1376 189 0 0 0 chr5 43559640 43559661 -156070489 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 198 0 0 0 chr5 43559660 43559682 -156070468 + (TA)n Simple_repeat Simple_repeat 1 22 0 234 0 0 0 chr5 43561161 43561187 -156068963 + (TTG)n Simple_repeat Simple_repeat 2 27 0 948 236 102 38 chr5 43561249 43561622 -156068528 - MLT2C1 LTR ERVL 0 397 1 238 314 81 16 chr5 43563021 43563145 -156067005 - MARNA DNA Mariner -81 505 374 450 313 28 28 chr5 43563539 43563753 -156066397 + MLT1I LTR MaLR 19 232 -177 2284 50 14 0 chr5 43564992 43565271 -156064879 + AluY SINE Alu 1 283 -28 373 181 42 0 chr5 43565939 43566010 -156064140 - Charlie7 DNA MER1_type -614 1998 1925 915 224 18 7 chr5 43566010 43566057 -156064093 - MLT2B2 LTR ERVL -2 513 468 1984 146 18 15 chr5 43566057 43566400 -156063750 + MER2 DNA MER2_type 1 344 0 915 224 18 7 chr5 43566400 43566632 -156063518 - MLT2B2 LTR ERVL -47 468 144 2387 46 0 0 chr5 43566645 43566928 -156063222 + AluY SINE Alu 1 283 -28 1861 205 8 13 chr5 43567699 43568090 -156062060 - MLT1B LTR MaLR 0 390 2 1746 171 129 3 chr5 43568176 43568556 -156061594 - MER63B DNA MER1_type -8 428 1 404 288 129 6 chr5 43568780 43568943 -156061207 + MIR SINE MIR 49 231 -31 1132 287 35 39 chr5 43569316 43569776 -156060374 + LTR16B LTR ERVL 3 460 -4 2335 318 55 41 chr5 43570053 43570610 -156059540 + HERV16 LTR ERVL 299 846 -4150 2126 124 0 0 chr5 43570610 43570892 -156059258 + AluSx SINE Alu 1 282 -30 2335 318 55 41 chr5 43570892 43570905 -156059245 + HERV16 LTR ERVL 846 857 -4139 195 42 0 0 chr5 43570905 43570929 -156059221 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2335 318 55 41 chr5 43570929 43571609 -156058541 + HERV16 LTR ERVL 857 1568 -3428 342 274 57 63 chr5 43571796 43571971 -156058179 - MERVL LTR ERVL -1179 4306 4136 660 287 40 60 chr5 43572051 43572399 -156057751 - MERVL LTR ERVL -1303 3693 3353 1087 307 41 14 chr5 43572455 43572891 -156057259 - LTR16B LTR ERVL -14 450 3 301 247 86 0 chr5 43572941 43573034 -156057116 + MER103 DNA DNA 57 157 -9 28 0 0 0 chr5 43573475 43573503 -156056647 + AT_rich Low_complexity Low_complexity 1 28 0 1864 234 16 59 chr5 43574878 43575840 -156054310 - L1ME1 LINE L1 -123 6043 5017 1829 161 49 23 chr5 43575840 43576189 -156053961 + MER46B DNA MER2_type 4 236 0 1864 234 16 59 chr5 43576189 43576358 -156053792 - L1ME1 LINE L1 -1149 5017 4842 1813 230 4 32 chr5 43576388 43576849 -156053301 - L1ME LINE L1 -458 5708 5261 1742 259 58 37 chr5 43576819 43577527 -156052623 - L1ME1 LINE L1 -1309 4837 4115 * 1974 96 54 7 chr5 43577830 43578110 -156052040 + AluSg SINE Alu 1 293 -17 304 359 41 21 chr5 43578938 43579083 -156051067 + MIR SINE MIR 53 200 -62 201 323 42 21 chr5 43580980 43581076 -156049074 + L2 LINE L2 2920 3017 -255 229 262 0 0 chr5 43581753 43581814 -156048336 - Charlie7 DNA MER1_type -2136 476 416 1363 207 126 24 chr5 43581831 43582203 -156047947 + MER66A LTR ERV1 29 438 -40 232 348 36 0 chr5 43582239 43582351 -156047799 - Charlie7 DNA MER1_type -2239 373 258 1630 281 16 21 chr5 43582358 43582842 -156047308 - MLT1H1 LTR MaLR -5 550 69 1861 131 4 0 chr5 43583659 43583918 -156046232 + AluSx SINE Alu 1 260 -52 1735 162 107 23 chr5 43583933 43584279 -156045871 - THE1C LTR MaLR 0 375 1 283 345 125 12 chr5 43585810 43586155 -156043995 + L1MC/D LINE L1 5282 5665 -2143 803 189 86 0 chr5 43586233 43586408 -156043742 + L1MA4 LINE L1 6108 6297 -3 842 146 85 38 chr5 43586417 43586484 -156043666 - MER96B DNA MER1_type? -47 370 308 2153 104 3 22 chr5 43586484 43586801 -156043349 + AluY SINE Alu 1 311 0 842 146 85 38 chr5 43586801 43586945 -156043205 - MER96B DNA MER1_type? -109 308 149 256 200 0 0 chr5 43586953 43586998 -156043152 + MER96B DNA MER1_type? 373 417 0 234 0 0 0 chr5 43587533 43587559 -156042591 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 584 229 57 69 chr5 43587839 43588014 -156042136 + MER5B DNA MER1_type 1 173 -5 231 243 14 29 chr5 43588050 43588120 -156042030 + MER5A DNA MER1_type 39 107 -82 344 249 11 102 chr5 43589300 43589437 -156040713 - FLAM_A SINE Alu -29 104 1 278 336 90 27 chr5 43591087 43591343 -156038807 + L2 LINE L2 2391 2662 -652 3131 198 29 89 chr5 43591810 43592838 -156037312 - LTR5 LTR ERVK 0 969 4 1287 273 114 12 chr5 43593002 43593781 -156036369 + L2 LINE L2 2480 3312 -1 236 275 38 25 chr5 43593817 43593897 -156036253 + MIR3 SINE MIR 125 205 -3 927 237 119 58 chr5 43594100 43594569 -156035581 + LTR33 LTR ERVL 6 503 -18 1937 164 6 6 chr5 43594643 43594955 -156035195 + AluJo SINE Alu 1 312 0 2301 104 3 0 chr5 43596606 43596913 -156033237 + AluSg SINE Alu 1 308 -2 2196 122 0 0 chr5 43596971 43597274 -156032876 + AluSc SINE Alu 1 303 -6 714 143 23 8 chr5 43597323 43597456 -156032694 + L1MB3 LINE L1 6041 6175 -8 1808 164 14 0 chr5 43597817 43598109 -156032041 + AluJb SINE Alu 12 307 -5 4374 192 36 8 chr5 43598153 43599081 -156031069 + L1P4 LINE L1 4379 5332 -814 443 136 0 144 chr5 43599083 43599164 -156030986 + MER50 LTR ERV1 498 558 -176 2169 90 4 0 chr5 43599164 43599469 -156030681 - AluSx SINE Alu 0 310 5 443 136 0 144 chr5 43599469 43599511 -156030639 + MER50 LTR ERV1 558 604 -130 2124 129 26 6 chr5 43599516 43599858 -156030292 + L1P4 LINE L1 5317 5665 -500 193 303 30 0 chr5 43601942 43602008 -156028142 - MIR SINE MIR -1 261 194 815 196 0 7 chr5 43602017 43602165 -156027985 - FRAM SINE Alu -27 149 3 342 0 0 0 chr5 43602167 43602205 -156027945 + (TG)n Simple_repeat Simple_repeat 1 38 0 273 250 40 13 chr5 43602351 43602427 -156027723 - HAL1b LINE L1 -439 909 832 312 227 10 21 chr5 43602542 43602639 -156027511 - HAL1b LINE L1 -507 841 746 363 264 0 0 chr5 43602668 43602755 -156027395 - HAL1 LINE L1 -343 2164 2078 1768 182 16 65 chr5 43603538 43603922 -156026228 + MLT1A1 LTR MaLR 1 365 0 1147 200 111 51 chr5 43604058 43604373 -156025777 - MLT1D LTR MaLR 0 505 172 341 248 20 30 chr5 43604624 43604725 -156025425 - MIR SINE MIR -134 128 29 740 239 68 56 chr5 43604877 43605128 -156025022 + MIR SINE MIR 9 262 0 2170 147 48 17 chr5 43605767 43606120 -156024030 + THE1B LTR MaLR 1 364 0 3280 86 22 12 chr5 43606120 43606611 -156023539 + THE1B-int LTR MaLR 1 496 -1084 7973 165 60 17 chr5 43606764 43608240 -156021910 + MLT1A1-int LTR MaLR 113 1651 0 2788 138 23 28 chr5 43608240 43608668 -156021482 + MSTB LTR MaLR 1 426 0 392 157 48 24 chr5 43608690 43608773 -156021377 - L1M4 LINE L1 -1232 4914 4830 363 222 24 32 chr5 43608920 43609046 -156021104 + CT-rich Low_complexity Low_complexity 4 128 0 322 271 198 44 chr5 43609059 43609332 -156020818 - HAL1 LINE L1 -1312 1195 881 22 56 0 0 chr5 43609933 43609969 -156020181 + AT_rich Low_complexity Low_complexity 1 36 0 471 304 93 12 chr5 43610502 43610663 -156019487 + MER91A DNA MER1_type 1 174 -22 230 325 13 26 chr5 43610673 43610750 -156019400 + MER91A DNA MER1_type 121 196 0 1366 127 71 24 chr5 43611200 43611452 -156018698 - MSTA LTR MaLR -164 264 1 1110 165 12 22 chr5 43611452 43611661 -156018489 - L1MC/D LINE L1 -545 5626 5419 263 305 191 0 chr5 43612636 43612767 -156017383 + MIR3 SINE MIR 33 188 -20 509 281 20 7 chr5 43614255 43614408 -156015742 - MER103 DNA DNA 0 166 12 2224 127 3 0 chr5 43614492 43614800 -156015350 + AluSx SINE Alu 1 309 -3 28 0 0 0 chr5 43614926 43614954 -156015196 + AT_rich Low_complexity Low_complexity 1 28 0 386 0 0 0 chr5 43615232 43615276 -156014874 - MADE1 DNA Mariner 0 80 37 341 91 169 0 chr5 43616028 43616105 -156014045 + AluSc SINE Alu 203 292 -7 234 0 0 0 chr5 43617994 43618020 -156012130 + (T)n Simple_repeat Simple_repeat 1 26 0 316 265 24 12 chr5 43619411 43619494 -156010656 + MIR SINE MIR 28 111 -151 2208 108 7 0 chr5 43619625 43619920 -156010230 + AluSp SINE Alu 1 297 -16 1669 147 82 0 chr5 43620168 43620460 -156009690 - L1MC1 LINE L1 -30 6303 5988 187 295 180 0 chr5 43621624 43621685 -156008465 + MER5B DNA MER1_type 51 122 -56 342 298 147 23 chr5 43621834 43622052 -156008098 + MIR SINE MIR 10 254 -8 2130 119 0 3 chr5 43622060 43622355 -156007795 + AluSg1 SINE Alu 1 294 -15 697 279 60 4 chr5 43622697 43622930 -156007220 - MLT1L LTR MaLR -2 613 368 2684 38 0 13 chr5 43622986 43623301 -156006849 + AluY SINE Alu 1 311 0 477 240 40 32 chr5 43623301 43623426 -156006724 - MLT1L LTR MaLR -338 277 152 447 306 37 0 chr5 43623454 43623562 -156006588 + L2 LINE L2 3161 3272 0 1369 164 61 24 chr5 43624256 43624549 -156005601 + AluJo SINE Alu 9 312 0 302 215 153 62 chr5 43624668 43624861 -156005289 - L1ME4a LINE L1 -4 6117 5943 1740 154 27 13 chr5 43624861 43625159 -156004991 - AluJb SINE Alu -10 302 1 302 215 153 62 chr5 43625159 43625359 -156004791 - L1ME4a LINE L1 -178 5943 5652 356 203 0 0 chr5 43625563 43625632 -156004518 + AluJ/FLAM SINE Alu 1 69 -233 243 231 0 0 chr5 43625661 43625713 -156004437 + G-rich Low_complexity Low_complexity 1 52 0 830 180 111 11 chr5 43625716 43625905 -156004245 + MER50 LTR ERV1 33 240 -494 * 1930 115 7 7 chr5 43625888 43626167 -156003983 + MER50 LTR ERV1 433 711 -23 258 267 0 0 chr5 43626168 43626228 -156003922 + FLAM SINE Alu 68 127 -6 181 326 132 16 chr5 43626485 43626614 -156003536 + MIR SINE MIR 3 146 -116 272 279 196 13 chr5 43626646 43626804 -156003346 - MIR SINE MIR -54 208 22 953 166 44 57 chr5 43626952 43627181 -156002969 - MER96B DNA MER1_type? 0 417 192 41 87 0 0 chr5 43627996 43628100 -156002050 + AT_rich Low_complexity Low_complexity 1 104 0 2202 103 17 0 chr5 43628106 43628408 -156001742 + AluSq SINE Alu 1 307 -6 662 281 81 37 chr5 43628653 43628999 -156001151 - MLT1J2 LTR MaLR -36 410 19 425 315 13 34 chr5 43629022 43629260 -156000890 + L1MC4a LINE L1 5694 5926 -1882 394 238 70 75 chr5 43629260 43629487 -156000663 + L1MC4a LINE L1 5711 5936 -1872 261 206 0 48 chr5 43629930 43629993 -156000157 + MLT1J2 LTR MaLR 38 97 -353 241 263 30 61 chr5 43630209 43630308 -155999842 - L2 LINE L2 -12 3260 3165 1658 193 52 60 chr5 43630416 43630758 -155999392 - MLT2B1 LTR ERVL -139 381 41 4306 61 322 0 chr5 43630758 43631383 -155998767 + LTR12 LTR ERV1 1 826 0 1658 193 52 60 chr5 43631383 43631424 -155998726 - MLT2B1 LTR ERVL -479 41 1 628 267 107 15 chr5 43633279 43633485 -155996665 + MIR SINE MIR 23 247 -15 183 393 9 0 chr5 43633534 43633641 -155996509 - L2 LINE L2 -642 2672 2565 467 308 128 73 chr5 43634228 43634695 -155995455 + MLT1K LTR MaLR 96 588 0 676 209 310 45 chr5 43635515 43635783 -155994367 + MLT1D LTR MaLR 1 339 -166 * 2195 148 36 44 chr5 43635770 43635813 -155994337 - MLT2D LTR ERVL -6 408 366 297 0 0 0 chr5 43635813 43635846 -155994304 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 2195 148 36 44 chr5 43635846 43635985 -155994165 - MLT2D LTR ERVL -48 366 227 2285 109 6 3 chr5 43635985 43636297 -155993853 + AluSp SINE Alu 1 313 0 2195 148 36 44 chr5 43636297 43636524 -155993626 - MLT2D LTR ERVL -187 227 1 673 186 161 47 chr5 43637293 43637404 -155992746 + Charlie4a DNA MER1_type 126 223 -1738 2334 89 0 7 chr5 43637404 43637706 -155992444 + AluSx SINE Alu 1 300 -12 673 186 161 47 chr5 43637706 43637873 -155992277 + Charlie4a DNA MER1_type 223 436 -72 894 164 0 0 chr5 43637878 43638012 -155992138 + AluJo SINE Alu 1 134 -178 414 149 27 14 chr5 43638012 43638086 -155992064 + Charlie4a DNA MER1_type 431 505 -3 2061 144 99 9 chr5 43638818 43639152 -155990998 - MLT1A1 LTR MaLR -1 364 1 645 252 110 8 chr5 43639939 43640157 -155989993 - MIR SINE MIR -11 251 15 2386 119 9 9 chr5 43640201 43640538 -155989612 - MER1B DNA MER1_type 0 337 1 679 217 84 110 chr5 43642252 43642531 -155987619 + L1MC4a LINE L1 5581 5866 -255 1830 158 3 10 chr5 43642531 43642822 -155987328 + AluJb SINE Alu 1 289 -23 207 0 0 0 chr5 43642824 43642847 -155987303 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 234 0 0 0 chr5 43642846 43642872 -155987278 + (TA)n Simple_repeat Simple_repeat 1 26 0 679 217 84 110 chr5 43642847 43642958 -155987192 + L1MC4a LINE L1 5867 5945 -176 231 36 0 0 chr5 43642963 43642991 -155987159 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1153 172 21 0 chr5 43642993 43643185 -155986965 - AluJo SINE Alu -30 282 87 21 36 0 0 chr5 43643185 43643213 -155986937 + AT_rich Low_complexity Low_complexity 1 28 0 451 307 40 28 chr5 43643213 43643389 -155986761 + MER5A DNA MER1_type 12 189 0 967 179 5 32 chr5 43643477 43643667 -155986483 - AluJo SINE Alu -2 310 126 2029 118 6 53 chr5 43643809 43644130 -155986020 + AluSx SINE Alu 1 306 -6 406 280 48 8 chr5 43644194 43644319 -155985831 - L2 LINE L2 -1 3312 3183 210 275 73 46 chr5 43644343 43644452 -155985698 - L2 LINE L2 -249 3064 2953 496 254 14 22 chr5 43645771 43645909 -155984241 + MER5A DNA MER1_type 52 188 -1 653 295 36 10 chr5 43646087 43646280 -155983870 - MER115 DNA AcHobo -438 255 58 2628 34 7 0 chr5 43646777 43647075 -155983075 - AluY SINE Alu -11 300 1 30 77 0 0 chr5 43647970 43648035 -155982115 + AT_rich Low_complexity Low_complexity 1 65 0 316 115 39 0 chr5 43648069 43648121 -155982029 - MER116 DNA Mariner 0 80 27 368 130 14 0 chr5 43649948 43650017 -155980133 + CT-rich Low_complexity Low_complexity 1 70 0 24 0 0 0 chr5 43651168 43651192 -155978958 + AT_rich Low_complexity Low_complexity 1 24 0 252 236 0 0 chr5 43651362 43651451 -155978699 + T-rich Low_complexity Low_complexity 1 89 0 351 279 72 72 chr5 43651522 43651884 -155978266 - L1M3c LINE L1 -4591 1550 1189 322 319 72 42 chr5 43651955 43652121 -155978029 + MIR SINE MIR 9 179 -83 241 194 65 0 chr5 43653239 43653301 -155976849 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 250 234 78 0 chr5 43654163 43654227 -155975923 + MIR SINE MIR 36 104 -104 1712 207 30 22 chr5 43654454 43654816 -155975334 - MLT1A1 LTR MaLR 0 365 1 273 164 0 36 chr5 43655010 43655065 -155975085 - MIR3 SINE MIR -48 160 108 1885 149 7 13 chr5 43655459 43655768 -155974382 + AluJb SINE Alu 1 307 -5 1757 199 30 38 chr5 43655832 43656225 -155973925 - MLT1B LTR MaLR 0 390 1 7698 184 114 20 chr5 43656449 43658049 -155972101 + MER52A LTR ERV1 6 1755 0 2634 154 90 0 chr5 43658204 43658521 -155971629 + L1MB2 LINE L1 5450 5826 -345 180 0 0 0 chr5 43658521 43658541 -155971609 + (TA)n Simple_repeat Simple_repeat 1 20 0 2634 154 90 0 chr5 43658541 43658702 -155971448 + L1MB2 LINE L1 5826 5971 -200 1647 209 3 3 chr5 43658702 43658994 -155971156 + AluJo SINE Alu 1 292 -20 322 65 0 0 chr5 43659010 43659056 -155971094 - L1PA7 LINE L1 -4 6150 6105 293 286 0 14 chr5 43659158 43659228 -155970922 - MER5B DNA MER1_type -109 69 1 2043 113 3 7 chr5 43659431 43659738 -155970412 + AluSx SINE Alu 2 307 0 2444 121 39 17 chr5 43659808 43660164 -155969986 - THE1B LTR MaLR 0 364 1 4879 87 0 11 chr5 43660164 43660819 -155969331 - THE1B-int LTR MaLR 0 1580 933 468 215 0 9 chr5 43662276 43662383 -155967767 - AluSp/q SINE Alu 0 313 208 190 315 27 0 chr5 43663103 43663176 -155966974 + L2 LINE L2 3192 3266 -47 1719 154 39 0 chr5 43664495 43664774 -155965376 - AluJo SINE Alu 0 312 23 699 266 58 11 chr5 43664774 43665052 -155965098 + L1MC4a LINE L1 5597 5887 -1921 1905 123 28 14 chr5 43665081 43665366 -155964784 + AluSx SINE Alu 1 289 -23 329 279 37 37 chr5 43665742 43665878 -155964272 - LTR67 LTR ERVL -266 291 156 974 231 15 132 chr5 43666865 43667389 -155962761 - LTR67 LTR ERVL 0 557 95 269 230 115 30 chr5 43667621 43667786 -155962364 - L1ME4a LINE L1 -4 6117 5939 1643 168 68 0 chr5 43668177 43668457 -155961693 + AluJo SINE Alu 1 299 -13 228 219 171 8 chr5 43668468 43668591 -155961559 - L1ME4a LINE L1 -844 5302 5160 251 261 149 30 chr5 43668721 43668855 -155961295 + L2 LINE L2 2366 2515 -799 1674 117 0 0 chr5 43668958 43669180 -155960970 - AluSx SINE Alu -90 222 1 415 274 134 24 chr5 43669763 43670434 -155959716 + L1MC5 LINE L1 7098 7671 -290 715 195 76 22 chr5 43670434 43670619 -155959531 + LTR41 LTR ERVL 1 195 -578 2183 92 0 42 chr5 43671077 43671383 -155958767 - AluSg SINE Alu -17 293 1 296 24 0 24 chr5 43671415 43671457 -155958693 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 619 206 122 23 chr5 43671465 43671596 -155958554 - FRAM SINE Alu -32 144 1 1678 149 41 30 chr5 43671606 43671901 -155958249 - AluJb SINE Alu -14 298 1 396 153 14 0 chr5 43671901 43671973 -155958177 + LTR41 LTR ERVL 700 772 -1 493 223 69 8 chr5 43671978 43672108 -155958042 + L1MC4 LINE L1 7781 7918 -124 228 280 17 59 chr5 43672139 43672257 -155957893 + L1MC4 LINE L1 7904 8016 -26 1731 157 7 27 chr5 43672274 43672567 -155957583 + AluJb SINE Alu 1 287 -25 215 159 23 0 chr5 43673364 43673408 -155956742 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 264 269 184 18 chr5 43673432 43673741 -155956409 + LTR16A1 LTR ERVL 55 457 0 381 228 53 132 chr5 43673991 43674219 -155955931 - L1ME4a LINE L1 -1353 4793 4584 1523 154 82 18 chr5 43674293 43674573 -155955577 - AluJo SINE Alu -14 298 1 495 0 0 0 chr5 43674989 43675044 -155955106 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2313 101 0 0 chr5 43675342 43675638 -155954512 - AluSx SINE Alu -16 296 1 25 0 0 0 chr5 43675690 43675715 -155954435 + AT_rich Low_complexity Low_complexity 1 25 0 1534 108 0 0 chr5 43675791 43675994 -155954156 - AluY SINE Alu -21 290 88 2262 96 7 7 chr5 43677171 43677472 -155952678 - AluSq SINE Alu -12 301 1 597 260 33 69 chr5 43677472 43677776 -155952374 - MER97c DNA MER1_type? -30 1060 768 2040 224 94 4 chr5 43678092 43678593 -155951557 - MER97a DNA MER1_type? -289 605 60 350 74 147 0 chr5 43678830 43678925 -155951225 + L1P4 LINE L1 5379 5487 -687 369 127 0 0 chr5 43679209 43679264 -155950886 - Alu SINE Alu -246 55 1 22 35 0 0 chr5 43679601 43679630 -155950520 + AT_rich Low_complexity Low_complexity 1 29 0 1970 153 0 0 chr5 43679630 43679924 -155950226 - AluSx SINE Alu -18 294 1 2176 256 51 47 chr5 43680046 43681601 -155948549 - L1ME2 LINE L1 -19 6145 4497 2844 136 23 21 chr5 43681704 43682131 -155948019 - MSTA LTR MaLR 0 428 1 226 353 26 33 chr5 43683664 43683817 -155946333 - MIR3 SINE MIR -23 185 34 308 283 8 25 chr5 43683852 43683972 -155946178 - HERV16 LTR ERVL -292 4704 4587 874 289 21 7 chr5 43684024 43684304 -155945846 - HERV16 LTR ERVL -4695 301 18 375 303 34 62 chr5 43684393 43684601 -155945549 - LTR16A LTR ERVL -216 234 33 402 108 0 0 chr5 43685245 43685310 -155944840 + (TG)n Simple_repeat Simple_repeat 2 66 0 434 220 152 40 chr5 43686354 43686677 -155943473 - HAL1b LINE L1 -26 1322 964 771 274 69 33 chr5 43686727 43687150 -155943000 - HAL1b LINE L1 -451 897 460 2121 132 58 28 chr5 43687150 43687514 -155942636 + THE1C LTR MaLR 1 375 0 2701 134 9 9 chr5 43687516 43687940 -155942210 + THE1C-int LTR MaLR 3 426 -1154 1221 175 57 39 chr5 43687979 43688259 -155941891 + THE1C LTR MaLR 91 375 0 2321 167 53 13 chr5 43689216 43689665 -155940485 + MLT1C LTR MaLR 1 467 0 26 30 0 0 chr5 43692125 43692158 -155937992 + AT_rich Low_complexity Low_complexity 1 33 0 5531 153 30 39 chr5 43692874 43693358 -155936792 - L1MA5A LINE L1 -8 6289 5802 240 35 0 0 chr5 43693358 43693387 -155936763 + (TATG)n Simple_repeat Simple_repeat 4 32 0 5531 153 30 39 chr5 43693387 43694522 -155935628 - L1MA5A LINE L1 -495 5802 4702 234 0 0 0 chr5 43694522 43694548 -155935602 + (TG)n Simple_repeat Simple_repeat 1 26 0 5531 153 30 39 chr5 43694548 43695028 -155935122 - L1MA5A LINE L1 -1595 4702 4219 5120 105 21 3 chr5 43695710 43696464 -155933686 - L1PA11 LINE L1 -1 6173 5406 396 297 159 47 chr5 43696483 43696823 -155933327 - LTR16C LTR ERVL 0 491 114 254 349 114 30 chr5 43697870 43697956 -155932194 - L2 LINE L2 -2 3270 3193 2758 88 0 6 chr5 43697956 43698318 -155931832 - THE1B LTR MaLR -2 362 3 254 349 114 30 chr5 43698318 43698823 -155931327 - L2 LINE L2 -79 3193 2587 22 56 0 0 chr5 43698882 43698918 -155931232 + AT_rich Low_complexity Low_complexity 1 36 0 2355 88 20 0 chr5 43700328 43700633 -155929517 - AluY SINE Alu 0 311 1 512 333 91 21 chr5 43700828 43701167 -155928983 - L3 LINE CR1 -171 1406 1044 23 68 0 0 chr5 43701363 43701407 -155928743 + AT_rich Low_complexity Low_complexity 1 44 0 180 176 0 0 chr5 43701414 43701448 -155928702 + T-rich Low_complexity Low_complexity 1 34 0 461 330 105 72 chr5 43701455 43702393 -155927757 - L2 LINE L2 -32 3240 2266 610 356 134 27 chr5 43702891 43703705 -155926445 - L3 LINE CR1 -248 1329 429 264 148 25 49 chr5 43703816 43703897 -155926253 + A-rich Low_complexity Low_complexity 4 82 0 413 266 144 21 chr5 43704424 43704751 -155925399 - L1ME4a LINE L1 -230 5891 5525 207 188 0 0 chr5 43704792 43704840 -155925310 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 372 300 9 27 chr5 43705085 43705195 -155924955 + L2 LINE L2 2636 2743 -571 249 312 128 28 chr5 43705500 43705641 -155924509 + L2 LINE L2 3118 3272 0 225 364 66 20 chr5 43706628 43706826 -155923324 + MIR SINE MIR 6 212 -50 205 271 14 57 chr5 43706948 43707018 -155923132 + L3 LINE CR1 317 383 -1194 335 91 0 18 chr5 43707454 43707509 -155922641 - MLT2A2 LTR ERVL 0 453 400 483 73 0 0 chr5 43707512 43707580 -155922570 + (TA)n Simple_repeat Simple_repeat 1 68 0 224 327 0 0 chr5 43707580 43707635 -155922515 + L2 LINE L2 3213 3267 -5 405 121 36 0 chr5 43707756 43707839 -155922311 + (TA)n Simple_repeat Simple_repeat 2 87 0 2624 86 70 3 chr5 43707844 43708218 -155921932 - MLT2A1 LTR ERVL -45 399 1 2001 151 0 0 chr5 43709277 43709582 -155920568 - AluSx SINE Alu -7 305 1 283 306 121 40 chr5 43709784 43709908 -155920242 + L2 LINE L2 3175 3308 -5 247 255 0 0 chr5 43709993 43710044 -155920106 + (CA)n Simple_repeat Simple_repeat 2 52 0 303 256 217 31 chr5 43710750 43710879 -155919271 - MIR SINE MIR -102 160 8 338 94 19 0 chr5 43710952 43711005 -155919145 - L1PA13 LINE L1 -4570 2217 2164 521 253 230 20 chr5 43711005 43711301 -155918849 - MER31B LTR ERV1 -108 358 1 251 286 48 0 chr5 43711567 43711630 -155918520 - MIR3 SINE MIR -13 195 130 22 0 0 0 chr5 43711849 43711871 -155918279 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr5 43712050 43712092 -155918058 + AT_rich Low_complexity Low_complexity 1 42 0 5346 130 9 14 chr5 43713490 43715428 -155914722 - L1PA15 LINE L1 -13 6152 4220 774 314 51 40 chr5 43716436 43717024 -155913126 - L2 LINE L2 -126 3187 2576 2322 268 106 20 chr5 43717024 43717781 -155912369 - L2 LINE L2 -1756 1558 737 274 320 0 0 chr5 43717866 43717944 -155912206 - L2 LINE L2 -2801 513 436 350 130 58 0 chr5 43718059 43718128 -155912022 - L1PA16 LINE L1 -6 6160 6088 1252 164 2 8 chr5 43718128 43718346 -155911804 - L1MC/D LINE L1 -585 5581 5386 * 9136 199 40 19 chr5 43718340 43720084 -155910066 - L1PA16 LINE L1 -2 6164 4458 1964 116 4 4 chr5 43720084 43720359 -155909791 + AluSx SINE Alu 1 275 -37 509 44 15 0 chr5 43720363 43720431 -155909719 + (GAAA)n Simple_repeat Simple_repeat 3 71 0 9136 199 40 19 chr5 43720431 43721913 -155908237 - L1PA16 LINE L1 -1710 4456 2864 393 258 158 8 chr5 43722202 43722322 -155907828 - L2 LINE L2 0 3313 3176 369 282 43 17 chr5 43722506 43722623 -155907527 - MIR3 SINE MIR -49 159 40 221 152 43 0 chr5 43723820 43723866 -155906284 + T-rich Low_complexity Low_complexity 2 49 0 548 289 100 21 chr5 43724494 43724733 -155905417 - MIR SINE MIR -2 260 3 1762 171 61 3 chr5 43725271 43725616 -155904534 - MLT1A1 LTR MaLR 0 365 1 641 321 123 17 chr5 43726197 43726546 -155903604 + MLT1J2 LTR MaLR 58 443 -7 603 217 30 42 chr5 43727024 43727190 -155902960 + MLT1D LTR MaLR 1 164 -341 799 223 10 17 chr5 43727438 43727638 -155902512 + MLT1D LTR MaLR 208 401 -104 1268 212 111 55 chr5 43728098 43728238 -155901912 + L1ME2 LINE L1 5562 5693 -471 261 0 0 0 chr5 43728238 43728267 -155901883 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1828 117 4 18 chr5 43728272 43728553 -155901597 - AluSp SINE Alu -32 281 5 1268 212 111 55 chr5 43728553 43728883 -155901267 + L1ME2 LINE L1 5696 6065 -99 293 360 120 42 chr5 43730199 43730368 -155899782 + L3 LINE CR1 357 511 -1066 2344 127 16 24 chr5 43730368 43730746 -155899404 - THE1C LTR MaLR 0 375 1 293 360 120 42 chr5 43730746 43730984 -155899166 + L3 LINE CR1 511 796 -781 374 335 75 28 chr5 43731104 43731358 -155898792 + L3 LINE CR1 821 1086 -491 180 379 85 29 chr5 43732550 43732822 -155897328 + L2 LINE L2 2564 2850 -464 832 230 123 12 chr5 43733049 43733321 -155896829 - L1ME3A LINE L1 -282 5880 5581 1623 199 101 58 chr5 43733339 43733749 -155896401 + MLT1E2 LTR MaLR 120 511 -115 207 0 0 0 chr5 43733749 43733772 -155896378 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2067 125 0 0 chr5 43733781 43734076 -155896074 - AluSx SINE Alu -17 295 1 1623 199 101 58 chr5 43734076 43734138 -155896012 + MLT1E2 LTR MaLR 518 623 -3 569 267 67 0 chr5 43734140 43734320 -155895830 - L1ME LINE L1 -551 6013 5822 198 0 0 0 chr5 43734925 43734947 -155895203 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 1061 222 61 84 chr5 43735466 43736037 -155894113 - L1ME LINE L1 -4160 2380 1823 1144 195 158 17 chr5 43737867 43738164 -155891986 + MER2 DNA MER2_type 7 345 0 442 338 58 58 chr5 43738236 43738615 -155891535 - L1M4 LINE L1 -2162 3984 3606 1034 191 149 40 chr5 43738875 43739204 -155890946 + MLT1A1 LTR MaLR 1 365 0 1750 147 13 36 chr5 43742185 43742492 -155887658 - AluJo SINE Alu -12 300 1 2147 113 17 0 chr5 43742854 43743146 -155887004 + AluSq SINE Alu 4 300 -13 674 245 64 64 chr5 43743603 43743852 -155886298 + MIR SINE MIR 1 249 -13 1386 113 5 54 chr5 43744052 43744316 -155885834 - AluSq SINE Alu 0 327 75 189 250 45 0 chr5 43744501 43744545 -155885605 - MIR SINE MIR -118 144 99 1980 129 0 4 chr5 43745304 43745612 -155884538 - AluSc SINE Alu 0 307 1 274 324 39 29 chr5 43746813 43746915 -155883235 + L2 LINE L2 3196 3298 -15 1816 153 10 75 chr5 43747668 43748055 -155882095 + MLT1B LTR MaLR 29 390 0 185 389 0 0 chr5 43748931 43748985 -155881165 - MIR SINE MIR -156 106 53 240 35 0 0 chr5 43749002 43749031 -155881119 + (TTA)n Simple_repeat Simple_repeat 3 31 0 1499 207 66 16 chr5 43751989 43752352 -155877798 + MLT1D LTR MaLR 1 381 -124 2248 98 3 13 chr5 43752625 43752930 -155877220 - AluSg SINE Alu -8 302 1 260 223 148 94 chr5 43753092 43753232 -155876918 - LTR33A LTR ERVL 0 523 366 4431 49 16 0 chr5 43753232 43753810 -155876340 + L1PA5 LINE L1 5578 6164 0 260 223 148 94 chr5 43753810 43753870 -155876280 - LTR33A LTR ERVL -157 366 311 * 537 305 75 0 chr5 43753859 43754046 -155876104 - LTR33A LTR ERVL -316 207 7 205 241 86 0 chr5 43755670 43755728 -155874422 - L2 LINE L2 -87 3226 3164 947 211 11 79 chr5 43755742 43756022 -155874128 + MLT1B LTR MaLR 1 261 -129 533 154 0 0 chr5 43756026 43756104 -155874046 + AluJb SINE Alu 7 84 -228 13256 93 10 0 chr5 43756104 43757924 -155872226 + L1PA5 LINE L1 1 1839 -4307 10902 46 5 0 chr5 43757928 43760044 -155870106 + L1PA5 LINE L1 4021 6146 -8 1052 188 4 52 chr5 43760074 43760324 -155869826 + AluJb SINE Alu 75 312 0 657 201 60 0 chr5 43760334 43760468 -155869682 + MLT1B LTR MaLR 249 390 0 213 354 13 0 chr5 43762268 43762347 -155867803 + MIR SINE MIR 72 151 -57 21 71 0 0 chr5 43762473 43762515 -155867635 + AT_rich Low_complexity Low_complexity 1 42 0 255 290 32 58 chr5 43763114 43763269 -155866881 + L1MEd LINE L1 1100 1250 -4869 244 313 42 0 chr5 43763240 43763336 -155866814 + L1PBa LINE L1 1314 1413 -1077 * 226 259 0 0 chr5 43763424 43763478 -155866672 + L1PBa LINE L1 1690 1743 -4387 2117 103 0 58 chr5 43763692 43764003 -155866147 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr5 43764006 43764029 -155866121 + AT_rich Low_complexity Low_complexity 1 23 0 1102 162 14 48 chr5 43764337 43764547 -155865603 + AluJb SINE Alu 27 229 -83 6315 28 0 0 chr5 43764688 43765439 -155864711 - L1PA3 LINE L1 -876 5270 4520 7448 24 2 6 chr5 43765439 43766319 -155863831 + L1PA3 LINE L1 5273 6155 0 2052 135 0 0 chr5 43766437 43766719 -155863431 + AluSx SINE Alu 1 282 -30 243 0 0 0 chr5 43766721 43766748 -155863402 + (TC)n Simple_repeat Simple_repeat 2 28 0 342 0 0 0 chr5 43766748 43766786 -155863364 + (CA)n Simple_repeat Simple_repeat 1 38 0 2213 112 3 3 chr5 43767395 43767707 -155862443 + AluSx SINE Alu 1 312 0 369 277 128 14 chr5 43768396 43768544 -155861606 + MIR SINE MIR 85 249 -13 743 174 30 0 chr5 43769597 43769729 -155860421 + AluJo SINE Alu 1 136 -176 269 292 5 108 chr5 43770456 43770641 -155859509 + MIR SINE MIR 69 234 -28 8619 138 19 11 chr5 43770781 43772190 -155857960 - Tigger1 DNA MER2_type -998 1420 1 383 61 0 0 chr5 43772332 43772381 -155857769 - Tigger1 DNA MER2_type -2004 414 366 296 383 0 7 chr5 43772917 43773066 -155857084 - MIR SINE MIR -49 213 66 255 31 0 0 chr5 43773095 43773127 -155857023 + (TG)n Simple_repeat Simple_repeat 2 33 0 2271 95 3 3 chr5 43775147 43775452 -155854698 + AluSc SINE Alu 2 306 -3 194 162 27 122 chr5 43775759 43775833 -155854317 - L2 LINE L2 -1280 2034 1968 370 73 0 0 chr5 43776212 43776267 -155853883 - MER73 LTR ERVL -589 55 1 1459 247 25 11 chr5 43776267 43776627 -155853523 + L1MC4 LINE L1 6691 7055 -987 637 253 118 19 chr5 43776639 43777206 -155852944 + L1MC4 LINE L1 7160 7710 -98 1712 156 75 28 chr5 43778691 43779049 -155851101 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr5 43779154 43779177 -155850973 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr5 43779597 43779624 -155850526 + AT_rich Low_complexity Low_complexity 1 27 0 874 294 124 21 chr5 43779887 43780306 -155849844 - HERV16 LTR ERVL -4131 865 404 876 240 35 143 chr5 43780684 43781168 -155848982 - LTR16A1 LTR ERVL 0 457 26 310 298 18 9 chr5 43781175 43781289 -155848861 + MER94 DNA DNA 20 134 0 337 175 194 0 chr5 43782272 43782323 -155847827 - L1MA10 LINE L1 -8 6326 6276 428 231 36 98 chr5 43782323 43782600 -155847550 - L1ME1 LINE L1 -67 6099 5840 26 50 0 0 chr5 43782733 43782773 -155847377 + AT_rich Low_complexity Low_complexity 1 40 0 1197 227 14 15 chr5 43782876 43783345 -155846805 + L1ME LINE L1 5077 5545 -621 434 351 105 61 chr5 43783885 43784684 -155845466 + L2 LINE L2 2430 3272 0 1820 152 71 0 chr5 43784858 43785181 -155844969 + MER7A DNA MER2_type 2 345 -1 352 276 68 23 chr5 43786402 43786623 -155843527 - L1MA8 LINE L1 -4 6287 6057 2155 120 0 13 chr5 43787344 43787660 -155842490 + AluSx SINE Alu 1 312 0 249 279 110 55 chr5 43787685 43787993 -155842157 + L1MEd LINE L1 930 1254 -4865 2297 128 19 3 chr5 43788173 43788520 -155841630 - L1PB1 LINE L1 -5 6146 5791 267 31 0 0 chr5 43788520 43788552 -155841598 + (TG)n Simple_repeat Simple_repeat 2 33 0 2297 128 19 3 chr5 43788552 43788563 -155841587 - L1PB1 LINE L1 -360 5791 5782 214 200 0 29 chr5 43788563 43788633 -155841517 + (TA)n Simple_repeat Simple_repeat 1 68 0 2434 105 20 26 chr5 43788633 43788741 -155841409 - L1PB1 LINE L1 -360 5791 5684 1982 132 66 33 chr5 43788741 43789104 -155841046 - THE1C LTR MaLR 0 375 1 2434 105 20 26 chr5 43789104 43789386 -155840764 - L1PB1 LINE L1 -467 5684 5403 187 430 20 7 chr5 43790060 43790209 -155839941 - L2 LINE L2 -188 3084 2934 21 36 0 0 chr5 43790276 43790304 -155839846 + AT_rich Low_complexity Low_complexity 1 28 0 187 313 31 0 chr5 43790332 43790396 -155839754 + L3b LINE CR1 1429 1494 -89 959 197 138 84 chr5 43790442 43790812 -155839338 - MLT1B LTR MaLR 0 390 1 30 77 0 0 chr5 43791613 43791678 -155838472 + AT_rich Low_complexity Low_complexity 1 65 0 491 227 153 7 chr5 43792234 43792384 -155837766 + Charlie1 DNA MER1_type 7 178 -2583 * 1799 222 32 7 chr5 43792378 43792815 -155837335 + Charlie1 DNA MER1_type 2055 2502 -259 25 31 0 0 chr5 43793138 43793170 -155836980 + AT_rich Low_complexity Low_complexity 1 32 0 1960 107 64 4 chr5 43793261 43793542 -155836608 - AluSq SINE Alu -15 298 1 185 308 0 55 chr5 43795389 43795480 -155834670 + L2 LINE L2 2932 3017 -255 2257 100 3 0 chr5 43795842 43796142 -155834008 + AluSc SINE Alu 1 301 -8 193 238 24 0 chr5 43796306 43796348 -155833802 - MIR3 SINE MIR -50 158 116 183 42 0 0 chr5 43796421 43796445 -155833705 + (CA)n Simple_repeat Simple_repeat 2 25 0 2316 102 7 0 chr5 43798247 43798552 -155831598 + AluSx SINE Alu 1 307 -5 441 0 0 0 chr5 43798597 43798646 -155831504 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 233 221 0 128 chr5 43799006 43799092 -155831058 - MIR SINE MIR -118 144 70 219 69 0 0 chr5 43799165 43799194 -155830956 + (CA)n Simple_repeat Simple_repeat 2 30 0 287 271 0 0 chr5 43799354 43799424 -155830726 + MER112 DNA MER1_type 179 248 -12 868 250 18 5 chr5 43799619 43799843 -155830307 + L1PA10 LINE L1 9 235 -5640 4655 220 1 32 chr5 43799844 43801067 -155829083 + L1PA10 LINE L1 356 2326 -4135 18361 144 7 13 chr5 43801067 43804984 -155825166 + L1PA10 LINE L1 2528 6482 -1 2441 123 17 3 chr5 43805528 43805887 -155824263 + THE1B LTR MaLR 1 364 0 183 129 0 0 chr5 43805927 43805958 -155824192 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr5 43805958 43805987 -155824163 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr5 43806837 43806860 -155823290 + AT_rich Low_complexity Low_complexity 1 23 0 228 237 15 30 chr5 43807199 43807330 -155822820 + (TA)n Simple_repeat Simple_repeat 1 129 0 1129 181 157 35 chr5 43808383 43808733 -155821417 + MSTB LTR MaLR 22 426 0 236 340 113 16 chr5 43809297 43809482 -155820668 + L2 LINE L2 2554 2756 -558 * 979 265 13 4 chr5 43809481 43809711 -155820439 - MIR SINE MIR -29 233 2 727 361 89 11 chr5 43809711 43810218 -155819932 + L2 LINE L2 2722 3269 -44 28 0 0 0 chr5 43810236 43810264 -155819886 + AT_rich Low_complexity Low_complexity 1 28 0 26 74 0 0 chr5 43810315 43810369 -155819781 + AT_rich Low_complexity Low_complexity 1 54 0 396 273 224 0 chr5 43811280 43811423 -155818727 + MER5A DNA MER1_type 9 183 -6 660 299 80 34 chr5 43812308 43812542 -155817608 - MLT1I LTR MaLR -19 390 135 294 29 0 0 chr5 43812542 43812577 -155817573 + (TA)n Simple_repeat Simple_repeat 1 35 0 660 299 80 34 chr5 43812577 43812666 -155817484 - MLT1I LTR MaLR -274 135 52 233 397 30 15 chr5 43813599 43813730 -155816420 + MIR3 SINE MIR 40 172 -36 2401 87 0 3 chr5 43816435 43816746 -155813404 - AluY SINE Alu -1 310 1 1685 239 117 46 chr5 43817976 43818653 -155811497 + MER50 LTR ERV1 10 734 0 299 256 105 0 chr5 43820057 43820143 -155810007 + MLT1I LTR MaLR 311 405 -4 346 341 49 40 chr5 43820240 43820463 -155809687 - L2 LINE L2 -19 3253 3029 284 113 75 0 chr5 43820464 43820517 -155809633 - MLT2A1 LTR ERVL 0 444 388 341 155 54 0 chr5 43820520 43820649 -155809501 + (TA)n Simple_repeat Simple_repeat 1 136 0 2596 89 45 11 chr5 43820651 43821032 -155809118 - MLT2A1 LTR ERVL -48 396 3 19737 79 8 5 chr5 43821034 43824748 -155805402 - HERVL-A1 LTR ERVL 0 5654 1868 327 108 50 36 chr5 43824748 43824887 -155805263 + (TA)n Simple_repeat Simple_repeat 1 141 0 272 192 62 27 chr5 43824889 43825035 -155805115 + (TATAA)n Simple_repeat Simple_repeat 2 152 0 359 124 65 20 chr5 43825035 43825188 -155804962 + (TA)n Simple_repeat Simple_repeat 2 161 0 2522 118 46 8 chr5 43825188 43825577 -155804573 - MLT2A1 LTR ERVL -40 404 1 327 304 0 36 chr5 43825888 43826000 -155804150 + MER5A DNA MER1_type 69 176 -13 2449 104 30 3 chr5 43826273 43826638 -155803512 - THE1C LTR MaLR 0 375 1 2253 158 54 15 chr5 43828274 43828684 -155801466 + MSTB LTR MaLR 1 426 0 1900 187 0 3 chr5 43828684 43829031 -155801119 + MSTB-int LTR MaLR 1 346 -1305 1392 107 0 0 chr5 43829033 43829230 -155800920 + MER107 DNA MER1_type 1 197 0 6833 195 22 15 chr5 43829231 43829284 -155800866 + MSTB-int LTR MaLR 349 400 -1251 2162 113 0 3 chr5 43829284 43829568 -155800582 + AluSq SINE Alu 13 295 -18 6833 195 22 15 chr5 43829568 43830802 -155799348 + MSTB-int LTR MaLR 400 1645 -6 2254 189 19 12 chr5 43830808 43831231 -155798919 + MSTB LTR MaLR 1 426 0 14430 145 29 18 chr5 43832337 43834785 -155795365 + Tigger2 DNA MER2_type 1 2474 -244 353 273 47 16 chr5 43836151 43836279 -155793871 - LTR33A LTR ERVL 0 523 392 312 269 52 45 chr5 43836565 43836699 -155793451 - LTR50 LTR ERVL -636 159 25 2335 80 0 3 chr5 43836800 43837111 -155793039 - AluY SINE Alu -1 310 1 2406 112 60 5 chr5 43838629 43839012 -155791138 + MLT2A1 LTR ERVL 1 404 -40 316 211 105 0 chr5 43839013 43839089 -155791061 - L1MC4 LINE L1 -1350 6692 6609 218 59 78 20 chr5 43839089 43839140 -155791010 + (TA)n Simple_repeat Simple_repeat 1 54 0 583 115 29 23 chr5 43839143 43839317 -155790833 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 446 140 10 30 chr5 43839320 43839420 -155790730 + (TA)n Simple_repeat Simple_repeat 2 99 0 42 58 0 29 chr5 43840138 43840241 -155789909 + AT_rich Low_complexity Low_complexity 1 100 0 763 53 18 44 chr5 43840977 43841091 -155789059 + AluY SINE Alu 96 206 -105 667 296 83 37 chr5 43842041 43842275 -155787875 - MLT1I LTR MaLR -19 390 135 603 0 0 0 chr5 43842275 43842342 -155787808 + (TA)n Simple_repeat Simple_repeat 2 68 0 667 296 83 37 chr5 43842342 43842431 -155787719 - MLT1I LTR MaLR -274 135 52 1457 181 70 24 chr5 43842817 43843115 -155787035 + MER2 DNA MER2_type 34 345 0 231 208 0 0 chr5 43843115 43843160 -155786990 + MLT2B1 LTR ERVL 474 518 -2 2461 225 31 54 chr5 43843165 43843837 -155786313 + MLT-int LTR MaLR 2 658 -1077 463 299 7 29 chr5 43843931 43844068 -155786082 + MLT-int LTR MaLR 1303 1436 -299 2788 163 29 36 chr5 43844068 43844656 -155785494 - L1PB4 LINE L1 -1 6155 5572 1177 184 33 8 chr5 43844664 43845023 -155785127 - L1PB4 LINE L1 -748 5398 5083 * 1522 197 11 4 chr5 43845017 43845296 -155784854 + MLT1A1-int LTR MaLR 1448 1728 -7 1295 204 12 23 chr5 43845348 43845663 -155784487 + MLT1A1 LTR MaLR 21 365 0 234 334 14 24 chr5 43845677 43845776 -155784374 + MER5A DNA MER1_type 74 172 -6 309 291 82 51 chr5 43846113 43846271 -155783879 - L1ME4a LINE L1 -197 5924 5762 256 330 62 6 chr5 43846333 43846509 -155783641 + L1M4 LINE L1 5368 5553 -625 253 273 27 27 chr5 43846966 43847076 -155783074 - HAL1 LINE L1 -145 2362 2253 439 319 77 93 chr5 43849216 43850174 -155779976 - L2 LINE L2 -1480 1834 892 330 310 121 0 chr5 43851247 43851363 -155778787 - L2 LINE L2 0 3313 3184 260 284 26 116 chr5 43851432 43851510 -155778640 - MIR SINE MIR -59 203 120 1465 178 75 0 chr5 43851510 43851791 -155778359 + AluJo SINE Alu 1 302 0 260 284 26 116 chr5 43851791 43851902 -155778248 - MIR SINE MIR -142 120 31 194 327 53 44 chr5 43853213 43853326 -155776824 - MIR3 SINE MIR -26 182 69 297 197 0 33 chr5 43853512 43853573 -155776577 - MIR3 SINE MIR -49 159 101 220 292 216 18 chr5 43853949 43854120 -155776030 + L2 LINE L2 2434 2638 -676 337 242 75 33 chr5 43854895 43855015 -155775135 + MIR SINE MIR 9 133 -129 440 315 183 0 chr5 43855039 43855252 -155774898 - MIR SINE MIR -2 260 9 1535 167 36 42 chr5 43855379 43855685 -155774465 + AluJb SINE Alu 1 304 -8 193 250 16 31 chr5 43855910 43855974 -155774176 - MIR SINE MIR -93 169 107 2140 241 70 42 chr5 43857428 43858067 -155772083 + MER21B LTR ERV1 147 803 -60 235 238 36 36 chr5 43858749 43858833 -155771317 + GA-rich Low_complexity Low_complexity 3 86 0 189 303 0 30 chr5 43858887 43858953 -155771197 - MIR SINE MIR -100 162 99 206 333 12 37 chr5 43859462 43859543 -155770607 - L2 LINE L2 -1 3312 3234 3802 105 52 12 chr5 43859914 43860507 -155769643 - L1PB1 LINE L1 -1 6150 5534 11576 232 49 32 chr5 43860507 43861353 -155768797 - L1M2 LINE L1 -655 5721 4891 275 64 0 21 chr5 43861353 43861400 -155768750 + (TA)n Simple_repeat Simple_repeat 2 47 0 11576 232 49 32 chr5 43861400 43862605 -155767545 - L1M2 LINE L1 -1485 4891 3708 2191 85 0 3 chr5 43862605 43862887 -155767263 - AluY SINE Alu -11 300 20 11576 232 49 32 chr5 43862887 43863815 -155766335 - L1M2 LINE L1 -2668 3708 2797 1828 135 40 0 chr5 43863815 43864089 -155766061 + AluSq SINE Alu 2 286 -27 333 0 0 0 chr5 43864093 43864130 -155766020 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 11576 232 49 32 chr5 43864130 43866959 -155763191 - L1M2 LINE L1 -3581 2795 14 208 213 43 21 chr5 43866995 43867042 -155763108 + MIR3 SINE MIR 116 163 -45 * 408 326 74 37 chr5 43867039 43867281 -155762869 - MIR SINE MIR 0 262 12 25 65 0 0 chr5 43868038 43868084 -155762066 + AT_rich Low_complexity Low_complexity 1 46 0 1986 233 52 22 chr5 43868421 43868923 -155761227 - LTR53 LTR ERVL -2 517 1 23 33 0 0 chr5 43869032 43869062 -155761088 + AT_rich Low_complexity Low_complexity 1 30 0 9505 40 1 70 chr5 43869145 43870663 -155759487 - L1PA5 LINE L1 -607 5547 4135 4980 39 0 0 chr5 43870663 43871254 -155758896 + L1PA5 LINE L1 5560 6151 -3 1358 271 95 45 chr5 43871969 43872058 -155758092 + L1ME LINE L1 1315 1398 -4998 189 74 0 0 chr5 43872058 43872085 -155758065 + (CA)n Simple_repeat Simple_repeat 2 28 0 1358 271 95 45 chr5 43872085 43872901 -155757249 + L1ME LINE L1 1398 2281 -4115 1995 106 3 11 chr5 43872901 43873221 -155756929 + AluSc SINE Alu 2 319 0 1358 271 95 45 chr5 43873221 43873347 -155756803 + L1ME LINE L1 2281 2399 -3997 * 1835 269 67 12 chr5 43873339 43873607 -155756543 + L1ME LINE L1 2301 2553 -3662 312 27 0 0 chr5 43873607 43873644 -155756506 + (CA)n Simple_repeat Simple_repeat 2 38 0 1835 269 67 12 chr5 43873644 43874108 -155756042 + L1ME LINE L1 2553 3073 -3142 861 69 9 0 chr5 43874111 43874258 -155755892 + AluY SINE Alu 175 322 0 323 291 24 20 chr5 43874259 43874510 -155755640 + L1ME LINE L1 3076 3327 -2888 1115 231 62 52 chr5 43874684 43875070 -155755080 + MLT1B LTR MaLR 1 390 0 3114 198 53 4 chr5 43875070 43875753 -155754397 + MLT1B-int LTR MaLR 1 716 -655 744 224 149 13 chr5 43876118 43876432 -155753718 + MLT1B-int LTR MaLR 1308 1735 0 1396 197 39 75 chr5 43876432 43876827 -155753323 + MLT1B LTR MaLR 1 365 0 851 230 22 55 chr5 43876827 43877101 -155753049 + L1ME LINE L1 4584 4848 -1367 943 450 54 9 chr5 43877102 43877435 -155752715 - MLT1A1 LTR MaLR -1 364 17 1652 239 61 76 chr5 43877449 43878503 -155751647 + L1ME LINE L1 4846 5888 -347 * 4106 166 18 6 chr5 43878499 43879634 -155750516 - L1PA16 LINE L1 -248 5918 4773 1417 206 64 87 chr5 43879634 43880105 -155750045 - MER66A LTR ERV1 0 478 97 3526 221 17 14 chr5 43880172 43881057 -155749093 - L1 LINE L1 -1371 4775 3888 1937 143 29 0 chr5 43881057 43881337 -155748813 - AluSx SINE Alu -24 288 1 2162 96 16 3 chr5 43881348 43881651 -155748499 - AluY SINE Alu -4 307 1 1404 250 26 11 chr5 43881661 43882129 -155748021 - L1PA16 LINE L1 -2547 3599 3125 1309 177 69 134 chr5 43882808 43882963 -155747187 + MSTD LTR MaLR 6 169 -227 2081 123 0 0 chr5 43882963 43883263 -155746887 + AluSg1 SINE Alu 1 300 -9 1309 177 69 134 chr5 43883263 43883525 -155746625 + MSTD LTR MaLR 169 396 0 279 305 39 29 chr5 43883672 43883809 -155746341 - MIR SINE MIR -13 195 58 182 62 31 0 chr5 43883935 43883967 -155746183 + (TTTTTG)n Simple_repeat Simple_repeat 1 33 0 1213 188 58 0 chr5 43884255 43884478 -155745672 + MER46A DNA MER2_type 1 236 0 2905 83 76 102 chr5 43884676 43885204 -155744946 - THE1B-int LTR MaLR -1066 514 1 2280 137 14 14 chr5 43885204 43885568 -155744582 - THE1B LTR MaLR 0 364 1 352 122 171 6 chr5 43885672 43885775 -155744375 - L1MA8 LINE L1 -81 6231 6113 * 447 135 153 5 chr5 43885773 43885879 -155744271 + L1MA8 LINE L1 6180 6286 -5 870 257 101 3 chr5 43885909 43886197 -155743953 - Charlie1 DNA MER1_type -268 2493 2178 333 47 0 0 chr5 43886199 43886242 -155743908 + (CA)n Simple_repeat Simple_repeat 2 44 0 246 211 11 95 chr5 43886327 43886422 -155743728 - MER112 DNA MER1_type -173 87 1 30 0 0 0 chr5 43886480 43886510 -155743640 + AT_rich Low_complexity Low_complexity 1 30 0 274 290 186 8 chr5 43886529 43886653 -155743497 + MLT1J2 LTR MaLR 1 146 -304 282 187 41 6 chr5 43886679 43886831 -155743319 + CT-rich Low_complexity Low_complexity 1 157 0 384 276 99 11 chr5 43887081 43887262 -155742888 + L1ME3A LINE L1 5767 5963 -207 715 163 0 57 chr5 43888125 43888266 -155741884 + AluJo/FLAM SINE Alu 1 133 -169 295 163 0 0 chr5 43888266 43888315 -155741835 + AluSg/x SINE Alu 136 184 -118 1249 135 14 24 chr5 43888319 43888527 -155741623 + AluSp SINE Alu 101 306 -7 279 0 0 0 chr5 43888527 43888558 -155741592 + (GA)n Simple_repeat Simple_repeat 1 31 0 369 43 0 0 chr5 43888569 43888616 -155741534 + (AATAG)n Simple_repeat Simple_repeat 1 47 0 414 142 43 21 chr5 43888672 43888725 -155741425 + GA-rich Low_complexity Low_complexity 2 52 -93 225 0 0 0 chr5 43888725 43888750 -155741400 + (TG)n Simple_repeat Simple_repeat 1 25 0 414 142 43 21 chr5 43888750 43888837 -155741313 + GA-rich Low_complexity Low_complexity 52 145 0 23 33 0 0 chr5 43889406 43889436 -155740714 + AT_rich Low_complexity Low_complexity 1 30 0 253 113 0 38 chr5 43889525 43889578 -155740572 + (GAA)n Simple_repeat Simple_repeat 1 51 0 229 255 184 0 chr5 43889599 43889697 -155740453 - MIR SINE MIR -24 238 123 453 19 0 0 chr5 43889820 43889874 -155740276 + (CA)n Simple_repeat Simple_repeat 2 55 0 244 263 13 39 chr5 43890023 43890114 -155740036 - MER5A DNA MER1_type -11 178 79 203 239 0 60 chr5 43890284 43890351 -155739799 - L2 LINE L2 -1 3271 3209 258 323 70 38 chr5 43890538 43890696 -155739454 - MIR SINE MIR -36 226 64 1137 117 6 6 chr5 43891287 43891467 -155738683 - L1MA3 LINE L1 -468 5837 5658 1755 184 0 25 chr5 43891903 43892223 -155737927 + AluJb SINE Alu 1 312 0 198 354 30 56 chr5 43893345 43893543 -155736607 - L2 LINE L2 -553 2761 2569 182 353 163 32 chr5 43894215 43895015 -155735135 - L2 LINE L2 -849 2465 1562 1266 234 21 14 chr5 43895734 43896070 -155734080 + MSTD LTR MaLR 1 395 -1 284 306 82 41 chr5 43896366 43896513 -155733637 - MIR SINE MIR -41 221 69 1408 122 10 5 chr5 43896566 43896771 -155733379 - AluSc SINE Alu -7 302 97 400 335 141 15 chr5 43897260 43897466 -155732684 + MIR SINE MIR 26 257 -5 1712 230 71 9 chr5 43898693 43899128 -155731022 - MLT1C LTR MaLR 0 467 6 218 321 37 0 chr5 43899131 43899212 -155730938 + MIR SINE MIR 176 259 -3 430 152 0 25 chr5 43899980 43900059 -155730091 + L1MB1 LINE L1 5798 5874 -294 195 100 0 0 chr5 43900316 43900346 -155729804 + (T)n Simple_repeat Simple_repeat 1 30 0 1853 199 58 12 chr5 43900738 43901150 -155729000 + MSTB1 LTR MaLR 1 431 -1 26 0 0 0 chr5 43901220 43901246 -155728904 + AT_rich Low_complexity Low_complexity 1 26 0 4534 109 11 48 chr5 43903450 43904164 -155725986 + LTR12 LTR ERV1 1 688 0 23 54 0 0 chr5 43904284 43904321 -155725829 + AT_rich Low_complexity Low_complexity 1 37 0 1225 78 0 6 chr5 43904484 43904650 -155725500 + L1PA4 LINE L1 5970 6134 -21 1051 31 0 0 chr5 43905539 43905666 -155724484 - L1PA5 LINE L1 0 6154 6028 247 241 19 0 chr5 43905852 43905906 -155724244 - MER5B DNA MER1_type -1 177 123 688 213 119 0 chr5 43905912 43906072 -155724078 + MLT2B1 LTR ERVL 1 179 -341 717 216 11 60 chr5 43906285 43906470 -155723680 + MER5B DNA MER1_type 3 178 0 205 414 0 0 chr5 43906472 43906559 -155723591 - MIR3 SINE MIR -50 158 72 304 281 65 54 chr5 43906958 43907143 -155723007 + LTR16C LTR ERVL 305 491 0 536 335 89 58 chr5 43908032 43908488 -155721662 - L2 LINE L2 -1 3312 2840 2268 101 3 0 chr5 43908488 43908784 -155721366 + AluSq SINE Alu 3 299 -14 536 335 89 58 chr5 43908784 43908960 -155721190 - L2 LINE L2 -473 2840 2671 840 228 140 19 chr5 43909024 43909331 -155720819 - LTR37A LTR ERV1 -50 376 33 2887 116 16 5 chr5 43910079 43910528 -155719622 + L1PA13 LINE L1 5708 6161 -2 1261 237 124 41 chr5 43912215 43912485 -155717665 + MLT2F LTR ERVL 1 247 -416 504 0 0 0 chr5 43912485 43912541 -155717609 + (TG)n Simple_repeat Simple_repeat 2 57 0 1261 237 124 41 chr5 43912541 43912790 -155717360 + MLT2F LTR ERVL 247 609 -54 230 224 0 0 chr5 43912833 43912882 -155717268 + MLT2F LTR ERVL 615 663 0 832 243 79 16 chr5 43913606 43913911 -155716239 - MER33 DNA MER1_type 0 324 1 392 333 43 29 chr5 43914700 43914834 -155715316 - MIR SINE MIR -1 261 121 2345 100 0 0 chr5 43914834 43915134 -155715016 + AluSg SINE Alu 1 300 -10 392 333 43 29 chr5 43915134 43915206 -155714944 - MIR SINE MIR -141 121 52 1236 207 73 50 chr5 43915345 43915702 -155714448 - MLT1A1 LTR MaLR 0 365 1 450 258 65 38 chr5 43915729 43915915 -155714235 + MLT1J LTR MaLR 68 258 -253 207 273 55 0 chr5 43916072 43916127 -155714023 - MIR SINE MIR -87 175 118 180 317 50 0 chr5 43916678 43916738 -155713412 + L3 LINE CR1 1403 1465 -112 346 339 81 6 chr5 43917273 43917447 -155712703 - MIR SINE MIR -56 206 20 630 102 0 0 chr5 43918449 43918537 -155711613 + AluSg SINE Alu 1 88 -222 603 335 50 48 chr5 43919197 43919727 -155710423 + L2 LINE L2 2726 3258 -55 350 183 158 24 chr5 43919740 43919822 -155710328 + MSTD LTR MaLR 1 93 -335 832 206 146 73 chr5 43920001 43920248 -155709902 + MSTD LTR MaLR 108 394 -2 6932 220 68 32 chr5 43920250 43921925 -155708225 + MSTD-int LTR MaLR 1 1735 0 865 217 48 14 chr5 43921951 43922218 -155707932 + MSTD LTR MaLR 76 383 -5 237 257 54 27 chr5 43924008 43924082 -155706068 + MER81 DNA DNA 39 114 0 200 329 112 7 chr5 43924242 43924394 -155705756 - MIR SINE MIR -11 251 84 2306 66 0 60 chr5 43925050 43925367 -155704783 - AluSx SINE Alu -14 298 1 588 273 169 43 chr5 43926064 43926390 -155703760 + MLT1J2 LTR MaLR 69 435 -15 403 357 126 36 chr5 43926542 43926875 -155703275 + L2 LINE L2 2906 3268 -4 1655 214 43 0 chr5 43927177 43927527 -155702623 + MLT1A1 LTR MaLR 1 365 0 2332 234 70 19 chr5 43928074 43928284 -155701866 - MLT1F1 LTR MaLR 0 567 369 2322 229 33 52 chr5 43928284 43928983 -155701167 - MER76 LTR ERV -2 686 1 2332 234 70 19 chr5 43928983 43929311 -155700839 - MLT1F1 LTR MaLR -198 369 1 280 337 56 0 chr5 43930404 43930493 -155699657 + L2 LINE L2 3137 3230 -42 24 0 0 0 chr5 43930716 43930740 -155699410 + AT_rich Low_complexity Low_complexity 1 24 0 310 293 141 54 chr5 43930815 43931057 -155699093 - L2 LINE L2 -36 3277 3015 1138 142 0 12 chr5 43931251 43931420 -155698730 - FRAM SINE Alu -11 165 1 253 274 39 49 chr5 43931621 43931723 -155698427 + L1MDa LINE L1 130 230 -6310 2074 239 44 53 chr5 43932150 43932176 -155697974 + L1MDa LINE L1 861 886 -5657 1523 221 29 32 chr5 43932176 43932551 -155697599 - MLT1A2 LTR MaLR 0 374 1 2074 239 44 53 chr5 43932551 43932942 -155697208 + L1MDa LINE L1 886 1272 -5271 270 0 0 0 chr5 43932942 43932972 -155697178 + (TA)n Simple_repeat Simple_repeat 1 30 0 2074 239 44 53 chr5 43932972 43933255 -155696895 + L1MDa LINE L1 1272 1556 -4987 4513 177 38 9 chr5 43933291 43933590 -155696560 + L1MB3 LINE L1 5167 5456 -727 180 0 0 0 chr5 43933590 43933610 -155696540 + (CA)n Simple_repeat Simple_repeat 1 20 0 4513 177 38 9 chr5 43933610 43934286 -155695864 + L1MB3 LINE L1 5456 6172 -11 2811 250 85 16 chr5 43934305 43935682 -155694468 + L1MDa LINE L1 1585 3055 -3485 1039 98 35 29 chr5 43935682 43935855 -155694295 + L1MA1 LINE L1 5881 6054 -248 231 281 0 0 chr5 43935850 43935907 -155694243 + L1MDa LINE L1 3088 3144 -3396 * 816 261 19 0 chr5 43935947 43936158 -155693992 + L1MDa LINE L1 4404 4618 -1922 807 235 166 11 chr5 43936152 43936253 -155693897 - L1MD2 LINE L1 -104 6255 6171 * 192 40 0 0 chr5 43936253 43936278 -155693872 + (TG)n Simple_repeat Simple_repeat 2 26 0 807 235 166 11 chr5 43936278 43936453 -155693697 - L1MD2 LINE L1 -188 6171 5936 495 108 14 5 chr5 43936453 43936591 -155693559 + MER4A-int LTR ERV1 603 807 -5791 360 43 0 0 chr5 43936608 43936654 -155693496 + (CA)n Simple_repeat Simple_repeat 1 46 0 269 189 0 38 chr5 43936723 43936776 -155693374 + LTR49 LTR ERV1 263 313 -282 6448 110 34 48 chr5 43936776 43937935 -155692215 + MER4A-int LTR ERV1 503 1448 -3567 1972 148 0 7 chr5 43937935 43938238 -155691912 - AluSq SINE Alu -11 302 2 6448 110 34 48 chr5 43938238 43938438 -155691712 + MER4A-int LTR ERV1 1448 1649 -3366 1227 153 127 0 chr5 43938439 43938667 -155691483 - LTR8 LTR ERV1 -434 257 1 3605 114 85 17 chr5 43938667 43939179 -155690971 + MER4A-int LTR ERV1 2737 3416 -3182 198 71 0 0 chr5 43939179 43939207 -155690943 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3605 114 85 17 chr5 43939207 43939498 -155690652 + MER4A-int LTR ERV1 3416 3686 -2912 * 15660 110 59 19 chr5 43939492 43940277 -155689873 + MER4A-int LTR ERV1 3837 4589 -2009 2333 82 7 0 chr5 43940277 43940569 -155689581 - AluY SINE Alu -15 296 3 15660 110 59 19 chr5 43940569 43942438 -155687712 + MER4A-int LTR ERV1 4589 6596 -2 525 153 20 20 chr5 43942442 43942540 -155687610 + MER4A LTR ERV1 1 98 -566 1682 139 11 78 chr5 43942540 43942910 -155687240 + MER4A LTR ERV1 261 664 0 201 365 84 28 chr5 43942963 43943212 -155686938 - L2 LINE L2 -1022 2292 2030 454 250 109 68 chr5 43943801 43944049 -155686101 - MIR SINE MIR -1 261 4 899 269 150 37 chr5 43944873 43945334 -155684816 - LTR33A LTR ERVL -9 514 2 224 239 0 0 chr5 43946105 43946151 -155683999 + (CATATA)n Simple_repeat Simple_repeat 5 50 0 893 291 12 53 chr5 43946161 43946480 -155683670 - MER93a LTR ERV1 -4 398 93 23 33 0 0 chr5 43946657 43946687 -155683463 + AT_rich Low_complexity Low_complexity 1 30 0 283 266 74 35 chr5 43946689 43946892 -155683258 - L1ME LINE L1 -297 5824 5614 293 315 85 12 chr5 43947016 43947181 -155682969 - MLT1I LTR MaLR -199 210 34 2437 171 32 45 chr5 43948323 43948884 -155681266 + MER41A LTR ERV1 1 554 0 250 296 0 34 chr5 43949090 43949178 -155680972 + A-rich Low_complexity Low_complexity 1 85 0 1281 248 118 25 chr5 43950265 43950292 -155679858 + L1M4 LINE L1 3563 3586 -2560 2454 60 0 17 chr5 43950292 43950592 -155679558 - AluY SINE Alu -16 295 1 1281 248 118 25 chr5 43950592 43951258 -155678892 + L1M4 LINE L1 3586 4321 -1825 284 77 0 0 chr5 43951259 43951298 -155678852 - Alu SINE Alu -264 39 1 3451 184 24 42 chr5 43951721 43952509 -155677641 + LTR1 LTR ERV1 12 785 0 7160 89 8 19 chr5 43952586 43953654 -155676496 + MER11C LTR ERVK 1 1057 -14 48527 86 10 2 chr5 43953693 43960408 -155669742 + HERVK11 LTR ERVK 1 6765 -1188 7742 58 0 2 chr5 43960395 43961394 -155668756 + HERVK11 LTR ERVK 6957 7953 0 * 7414 88 5 9 chr5 43961394 43962456 -155667694 + MER11C LTR ERVK 1 1057 -14 943 206 150 14 chr5 43962506 43962792 -155667358 + LTR36 LTR ERV1 54 378 -233 297 322 84 30 chr5 43962817 43963019 -155667131 + MIR SINE MIR 2 214 -48 309 89 0 0 chr5 43963366 43963411 -155666739 + (CA)n Simple_repeat Simple_repeat 2 46 0 951 225 151 73 chr5 43963411 43963874 -155666276 + MLT1D LTR MaLR 2 500 -5 396 0 0 0 chr5 43963874 43963918 -155666232 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr5 43963917 43963946 -155666204 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 204 67 0 0 chr5 43963945 43963975 -155666175 + (CA)n Simple_repeat Simple_repeat 1 30 0 * 2719 13 0 10 chr5 43964613 43964919 -155665231 + AluYa5 SINE Alu 1 303 -8 361 332 40 35 chr5 43965347 43965573 -155664577 + MIR SINE MIR 23 249 -13 939 203 14 48 chr5 43965815 43966069 -155664081 - MLT1A2 LTR MaLR -3 502 131 415 137 0 0 chr5 43966080 43966153 -155663997 - MER4E LTR ERV1 0 779 707 3158 135 37 0 chr5 43966183 43966775 -155663375 - MER4B LTR ERV1 0 779 1 13002 119 25 33 chr5 43966775 43968108 -155662042 - MER4B-int LTR ERV1 0 6758 5415 2774 13 0 0 chr5 43968108 43968410 -155661740 + AluY SINE Alu 1 302 -9 13002 119 25 33 chr5 43968410 43969886 -155660264 - MER4B-int LTR ERV1 -1343 5415 3883 1257 158 8 22 chr5 43969886 43970375 -155659775 + MER4A LTR ERV1 1 550 -114 452 238 113 19 chr5 43970375 43970535 -155659615 + LTR28 LTR ERV1 1 175 -845 230 268 14 0 chr5 43970562 43970633 -155659517 + LTR1 LTR ERV1 119 190 -595 * 1880 199 130 18 chr5 43970600 43971170 -155658980 + LTR28 LTR ERV1 298 1010 -10 2454 204 82 79 chr5 43971182 43972078 -155658072 + LTR28-int LTR ERV1 2 4061 -1156 306 153 0 34 chr5 43972078 43972137 -155658013 + LTR28 LTR ERV1 964 1020 0 * 809 99 0 0 chr5 43972137 43972247 -155657903 + MER4B LTR ERV1 492 601 -9 6400 138 32 7 chr5 43972250 43973388 -155656762 - MER4B-int LTR ERV1 -2864 3894 2729 355 118 0 0 chr5 43973388 43973439 -155656711 + MER30 DNA MER1_type 1 51 -179 771 146 0 0 chr5 43973439 43973569 -155656581 + (GAA)n Simple_repeat Simple_repeat 1 130 0 720 142 179 0 chr5 43973571 43973733 -155656417 + MER30 DNA MER1_type 39 229 -1 4924 130 16 39 chr5 43973734 43974767 -155655383 - MER4B-int LTR ERV1 -4026 2732 1723 28098 122 14 57 chr5 43974767 43981191 -155648959 - L1PA7 LINE L1 -4 6150 12 3770 149 50 72 chr5 43981207 43982367 -155647783 - MER4B-int LTR ERV1 -5324 1434 492 1584 131 50 28 chr5 43982364 43982647 -155647503 - MER4B-int LTR ERV1 -6469 289 1 * 3047 144 39 2 chr5 43982647 43983237 -155646913 - MER4B LTR ERV1 0 779 3 492 206 0 0 chr5 43983238 43983330 -155646820 - MLT1A2 LTR MaLR -279 95 4 207 302 38 36 chr5 43984455 43984538 -155645612 + MIR SINE MIR 74 155 -58 242 56 28 0 chr5 43984585 43984621 -155645529 + (TAGA)n Simple_repeat Simple_repeat 3 39 0 367 355 59 0 chr5 43985052 43985221 -155644929 + MIR SINE MIR 84 262 0 525 288 28 33 chr5 43986579 43986791 -155643359 + MER20 DNA MER1_type 5 215 -4 536 197 23 0 chr5 43987107 43987239 -155642911 + CT-rich Low_complexity Low_complexity 5 139 0 784 184 0 29 chr5 43987270 43987406 -155642744 - FLAM_C SINE Alu 0 133 2 674 201 7 0 chr5 43988052 43988191 -155641959 - L1 LINE L1 -950 5196 5057 28 91 0 0 chr5 43989165 43989242 -155640908 + AT_rich Low_complexity Low_complexity 1 77 0 21 36 0 0 chr5 43989810 43989838 -155640312 + AT_rich Low_complexity Low_complexity 1 28 0 562 287 82 10 chr5 43993498 43993693 -155636457 - MER63A DNA MER1_type -1 209 1 321 174 452 9 chr5 43993833 43993948 -155636202 + MER5A DNA MER1_type 17 182 -7 2595 62 0 0 chr5 43993971 43994279 -155635871 - AluY SINE Alu -3 308 1 294 29 0 0 chr5 43994302 43994337 -155635813 + (TG)n Simple_repeat Simple_repeat 2 36 0 1448 211 93 39 chr5 43994337 43994768 -155635382 + MSTB2 LTR MaLR 4 457 0 256 185 19 0 chr5 43996741 43996795 -155633355 + L1MC4 LINE L1 6658 6712 -1330 351 167 32 16 chr5 43996832 43996958 -155633192 + (TA)n Simple_repeat Simple_repeat 1 128 0 756 265 62 0 chr5 44000188 44000399 -155629751 + MER58A DNA MER1_type 1 224 0 320 275 69 38 chr5 44000562 44000693 -155629457 + LTR33 LTR ERVL 44 178 -343 6053 136 38 15 chr5 44002011 44003399 -155626751 + L1MA6 LINE L1 4877 6298 -2 2050 117 3 3 chr5 44003613 44003896 -155626254 + AluSg SINE Alu 1 283 -27 345 318 16 44 chr5 44004023 44004196 -155625954 + MIR SINE MIR 31 199 -9 4586 126 19 0 chr5 44005096 44005834 -155624316 + L1MA4A LINE L1 5542 6293 -10 1420 119 15 50 chr5 44006784 44006943 -155623207 - L1MA3 LINE L1 0 6305 6157 2768 7 0 0 chr5 44006943 44007241 -155622909 - AluYa5 SINE Alu -13 298 1 1420 119 15 50 chr5 44007241 44007342 -155622808 - L1MA3 LINE L1 -148 6157 6054 930 124 71 6 chr5 44007691 44007860 -155622290 - Tigger2 DNA MER2_type -55 2663 2484 1202 297 112 55 chr5 44007860 44008717 -155621433 - HAL1 LINE L1 -1268 1239 315 1620 197 11 27 chr5 44008717 44009088 -155621062 + MLT1A1 LTR MaLR 1 365 0 1202 297 112 55 chr5 44009088 44009234 -155620916 - HAL1 LINE L1 -2192 315 179 2325 89 0 0 chr5 44009350 44009643 -155620507 - AluY SINE Alu -18 293 1 2159 125 21 3 chr5 44009921 44010258 -155619892 - Tigger2 DNA MER2_type -236 2482 2140 1918 111 29 4 chr5 44010415 44010695 -155619455 + AluSx SINE Alu 1 287 -25 21 36 0 0 chr5 44010695 44010723 -155619427 + AT_rich Low_complexity Low_complexity 1 28 0 756 321 141 5 chr5 44010864 44011260 -155618890 - LTR16A LTR ERVL 0 450 1 2215 101 3 10 chr5 44011883 44012191 -155617959 - AluSx SINE Alu -6 306 1 1624 220 31 3 chr5 44013128 44013483 -155616667 + MLT1A1 LTR MaLR 1 365 0 751 323 82 19 chr5 44014457 44014776 -155615374 + L1PA16 LINE L1 -593 4294967041 -6448 268 245 166 36 chr5 44015023 44015162 -155614988 + L1PA16 LINE L1 769 925 -5268 11868 211 23 56 chr5 44015882 44017323 -155612827 + L1PA16 LINE L1 803 2289 -3934 247 200 0 71 chr5 44017323 44017393 -155612757 - AluJb SINE Alu -78 224 160 11868 211 23 56 chr5 44017393 44019723 -155610427 + L1PA16 LINE L1 2289 4359 -1864 534 16 0 0 chr5 44019723 44019786 -155610364 + (CA)n Simple_repeat Simple_repeat 2 64 0 11868 211 23 56 chr5 44019786 44021592 -155608558 + L1PA16 LINE L1 4359 6222 -1 360 371 104 9 chr5 44022873 44023094 -155607056 - L2 LINE L2 0 3272 3031 2555 151 20 36 chr5 44023351 44023849 -155606301 + LTR2B LTR ERV1 1 490 0 12955 136 39 17 chr5 44025856 44028025 -155602125 - Tigger1 DNA MER2_type 0 2418 202 13204 104 5 8 chr5 44028025 44028516 -155601634 + L1P LINE L1 2708 3199 -2947 1953 134 0 4 chr5 44028516 44028823 -155601327 - AluSg SINE Alu 0 311 6 13204 104 5 8 chr5 44028823 44030280 -155599870 + L1P LINE L1 3199 4651 -1495 341 167 0 0 chr5 44030272 44030344 -155599806 + L1P LINE L1 3223 3294 -2852 * 6514 76 11 8 chr5 44030345 44031209 -155598941 + L1PA7 LINE L1 4657 5529 -625 2771 13 0 0 chr5 44031209 44031513 -155598637 - AluYa5 SINE Alu -7 304 1 6514 76 11 8 chr5 44031513 44032140 -155598010 + L1PA7 LINE L1 5529 6152 -2 228 211 18 0 chr5 44032193 44032250 -155597900 + L1MC4 LINE L1 7905 7962 -80 902 72 16 8 chr5 44032291 44032416 -155597734 - L1PA10 LINE L1 -4 6164 6039 1179 257 136 33 chr5 44032426 44033204 -155596946 + L1ME3 LINE L1 4277 4973 -1189 2169 96 0 7 chr5 44033204 44033495 -155596655 - AluSc SINE Alu -18 291 3 1179 257 136 33 chr5 44033495 44034174 -155595976 + L1ME3 LINE L1 4973 5872 -290 316 328 77 34 chr5 44034485 44034750 -155595400 + L1ME LINE L1 5511 5798 -444 202 100 0 60 chr5 44034756 44034806 -155595344 + (TTA)n Simple_repeat Simple_repeat 3 49 0 242 265 0 0 chr5 44034868 44034917 -155595233 + polypurine Low_complexity Low_complexity 4 52 0 25 65 0 0 chr5 44034971 44035017 -155595133 + AT_rich Low_complexity Low_complexity 1 46 0 452 319 101 42 chr5 44035128 44035674 -155594476 + L1ME4a LINE L1 5317 5894 -227 2278 115 0 3 chr5 44035779 44036091 -155594059 - AluSx SINE Alu -1 311 1 1618 119 56 7 chr5 44037513 44037815 -155592335 + L1MA7 LINE L1 5972 6288 -3 2348 192 113 8 chr5 44037919 44038424 -155591726 + MER74A LTR ERVL 1 558 0 37 62 0 0 chr5 44038647 44038712 -155591438 + AT_rich Low_complexity Low_complexity 1 65 0 806 281 33 5 chr5 44038900 44039110 -155591040 + MER58A DNA MER1_type 6 221 -3 243 0 0 0 chr5 44039142 44039169 -155590981 + (TATAA)n Simple_repeat Simple_repeat 4 30 0 194 79 0 53 chr5 44039650 44039688 -155590462 + (GGA)n Simple_repeat Simple_repeat 3 38 0 1951 115 21 3 chr5 44040194 44040482 -155589668 + AluSq SINE Alu 1 293 -20 244 333 7 37 chr5 44042033 44042168 -155587982 - L1ME LINE L1 -304 5817 5687 552 295 98 27 chr5 44042203 44042427 -155587723 - MIR SINE MIR -21 241 2 365 326 67 19 chr5 44043564 44043753 -155586397 + MIR SINE MIR 32 221 -41 387 278 37 62 chr5 44044436 44044598 -155585552 + MER5B DNA MER1_type 19 176 -2 1792 111 0 0 chr5 44045572 44045807 -155584343 - AluSq SINE Alu -78 235 1 197 291 36 0 chr5 44045870 44045925 -155584225 + L2 LINE L2 3216 3272 0 637 322 105 42 chr5 44046239 44046745 -155583405 + MLT1H LTR MaLR 12 549 0 1873 223 49 10 chr5 44046762 44047251 -155582899 - L1 LINE L1 -3213 2933 2426 225 308 88 22 chr5 44047610 44047701 -155582449 - L2 LINE L2 -8 3264 3168 1230 263 65 31 chr5 44047748 44048227 -155581923 - Charlie4a DNA MER1_type -13 495 1 436 262 78 0 chr5 44048466 44048607 -155581543 + MER112 DNA MER1_type 109 260 0 1731 161 50 7 chr5 44049676 44049975 -155580175 + AluSx SINE Alu 1 312 0 363 289 0 0 chr5 44050226 44050316 -155579834 - L2 LINE L2 -1 3312 3223 287 299 123 10 chr5 44050645 44050783 -155579367 - MIR SINE MIR -62 146 45 2385 224 31 56 chr5 44050827 44051466 -155578684 + MLT1E2 LTR MaLR 1 623 -3 238 319 67 7 chr5 44052156 44052291 -155577859 - L1ME LINE L1 -390 5731 5589 2239 98 3 3 chr5 44052395 44052700 -155577450 + AluSc SINE Alu 1 305 -4 257 301 222 26 chr5 44053812 44053965 -155576185 + MER5A DNA MER1_type 6 188 -1 307 303 124 6 chr5 44054001 44054152 -155575998 - MER5A DNA MER1_type -14 175 4 207 167 0 0 chr5 44054591 44054633 -155575517 + (TTG)n Simple_repeat Simple_repeat 1 42 0 195 129 0 0 chr5 44055033 44055064 -155575086 + (CA)n Simple_repeat Simple_repeat 1 31 0 855 219 28 11 chr5 44055240 44055417 -155574733 + MLT1H LTR MaLR 1 180 -369 330 216 17 121 chr5 44055417 44055533 -155574617 - ORSL DNA AcHobo 0 275 172 1582 199 0 34 chr5 44055534 44055831 -155574319 + AluJb SINE Alu 2 288 -24 768 275 169 13 chr5 44056018 44056331 -155573819 + MLT1H LTR MaLR 188 549 0 259 281 31 31 chr5 44056463 44056559 -155573591 + L1MEd LINE L1 1158 1253 -4866 2671 143 39 12 chr5 44056892 44057376 -155572774 + L1MA7 LINE L1 5336 5832 -459 900 96 0 0 chr5 44057376 44057491 -155572659 + AluSp/q SINE Alu 175 289 -24 2739 137 0 38 chr5 44057491 44057988 -155572162 + L1MA7 LINE L1 5814 6291 0 336 158 40 79 chr5 44058044 44058145 -155572005 - L1MC4 LINE L1 -1 8041 7945 693 307 44 16 chr5 44058522 44058887 -155571263 - HAL1 LINE L1 -281 2226 1852 228 290 110 30 chr5 44058906 44059006 -155571144 + L2 LINE L2 3163 3270 -2 589 327 88 0 chr5 44059900 44060105 -155570045 + MIR SINE MIR 9 231 -31 413 308 38 32 chr5 44060394 44060579 -155569571 - MIR3 SINE MIR -2 206 21 180 0 0 0 chr5 44060735 44060755 -155569395 + (CATATA)n Simple_repeat Simple_repeat 3 22 0 2094 128 13 0 chr5 44061208 44061512 -155568638 + AluSx SINE Alu 4 311 -1 355 224 33 59 chr5 44062434 44062586 -155567564 - L1MC5 LINE L1 -50 7911 7764 198 0 0 0 chr5 44062607 44062629 -155567521 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1630 193 11 4 chr5 44062631 44062911 -155567239 - AluJo SINE Alu -29 283 2 31 68 0 0 chr5 44062940 44062999 -155567151 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr5 44064026 44064047 -155566103 + AT_rich Low_complexity Low_complexity 1 21 0 262 239 15 0 chr5 44064049 44064116 -155566034 - L1MC5 LINE L1 -399 7562 7495 699 90 156 0 chr5 44064125 44064247 -155565903 + L1MA8 LINE L1 6147 6287 -4 1531 243 47 67 chr5 44064275 44064978 -155565172 - L1MC5 LINE L1 -451 7510 6822 219 263 0 0 chr5 44065030 44065087 -155565063 + (TA)n Simple_repeat Simple_repeat 1 57 0 1351 199 107 0 chr5 44066102 44066374 -155563776 - MLT1D LTR MaLR 0 505 205 364 157 14 43 chr5 44066373 44066443 -155563707 - MLT1D LTR MaLR -435 70 3 * 375 226 58 58 chr5 44066447 44066584 -155563566 - MIR SINE MIR -21 241 105 3243 206 72 3 chr5 44067166 44067850 -155562300 - MER44D DNA MER2_type 0 605 3 5188 152 13 9 chr5 44067867 44068222 -155561928 - L1PB4 LINE L1 -15 6141 5789 438 20 0 0 chr5 44068222 44068273 -155561877 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 5188 152 13 9 chr5 44068273 44068645 -155561505 - L1PB4 LINE L1 -367 5789 5407 1918 186 103 3 chr5 44068645 44069032 -155561118 + MSTB LTR MaLR 1 426 0 5188 152 13 9 chr5 44069032 44069241 -155560909 - L1PB4 LINE L1 -749 5407 5200 629 251 17 29 chr5 44069932 44070107 -155560043 + MLT1H1 LTR MaLR 383 555 0 1113 296 64 14 chr5 44070180 44070602 -155559548 - MLT1J2 LTR MaLR -7 443 1 259 318 64 0 chr5 44071387 44071497 -155558653 - MER117 DNA MER1_type -56 141 25 534 331 104 21 chr5 44071552 44071839 -155558311 - L2 LINE L2 -7 3265 2955 2343 85 0 16 chr5 44072327 44072634 -155557516 - AluSc SINE Alu -7 302 1 30 0 0 0 chr5 44073422 44073452 -155556698 + AT_rich Low_complexity Low_complexity 1 30 0 32 0 0 0 chr5 44073594 44073626 -155556524 + AT_rich Low_complexity Low_complexity 1 32 0 2511 112 0 32 chr5 44074807 44074847 -155555303 - THE1B LTR MaLR 0 364 324 2211 64 26 51 chr5 44074847 44075159 -155554991 + AluY SINE Alu 1 304 -7 2511 112 0 32 chr5 44075159 44075493 -155554657 - THE1B LTR MaLR -40 324 2 268 318 0 0 chr5 44076595 44076705 -155553445 + A-rich Low_complexity Low_complexity 1 110 0 189 0 0 0 chr5 44078061 44078082 -155552068 + (GGCTG)n Simple_repeat Simple_repeat 1 21 0 2416 243 71 8 chr5 44078402 44078990 -155551160 - MLT1E2 LTR MaLR 0 626 2 946 260 180 17 chr5 44079827 44080243 -155549907 + MLT1F1 LTR MaLR 74 557 -10 2225 110 0 0 chr5 44080433 44080732 -155549418 + AluY SINE Alu 1 299 -12 192 382 0 0 chr5 44080867 44080922 -155549228 + MIR SINE MIR 40 94 -114 353 298 91 50 chr5 44081189 44081640 -155548510 + L1ME1 LINE L1 5333 5797 -553 894 184 6 12 chr5 44081764 44081927 -155548223 + AluJo SINE Alu 125 286 -26 2123 106 3 3 chr5 44082380 44082687 -155547463 - AluSg SINE Alu 0 307 1 604 113 130 9 chr5 44083736 44083851 -155546299 - MSTC LTR MaLR 0 428 300 237 300 126 57 chr5 44083970 44084200 -155545950 + L2 LINE L2 3068 3313 0 1481 205 3 24 chr5 44084406 44084704 -155545446 - AluJo SINE Alu -20 292 1 858 157 59 39 chr5 44084704 44084908 -155545242 - MER3 DNA MER1_type 0 209 2 1256 137 0 81 chr5 44084941 44085175 -155544975 - AluSc SINE Alu -4 305 91 424 103 39 13 chr5 44085774 44085852 -155544298 + MADE1 DNA Mariner 1 80 0 381 43 0 0 chr5 44086401 44086448 -155543702 + (TG)n Simple_repeat Simple_repeat 2 48 0 273 286 167 0 chr5 44087832 44087958 -155542192 + MIR3 SINE MIR 55 201 -7 1134 248 30 21 chr5 44089094 44089433 -155540717 + L1ME1 LINE L1 5808 6149 -17 1442 253 100 42 chr5 44089983 44090485 -155539665 + MLT1F LTR MaLR 12 542 0 726 253 70 38 chr5 44090773 44091245 -155538905 + MLT1H1 LTR MaLR 1 524 -31 1225 89 0 0 chr5 44091384 44091542 -155538608 - AluY SINE Alu -7 304 147 1993 117 0 32 chr5 44093830 44094132 -155536018 + AluSx SINE Alu 9 301 0 558 67 0 0 chr5 44094390 44094465 -155535685 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 2619 216 16 46 chr5 44094518 44095188 -155534962 + MER82 DNA MER2_type 3 652 -1 180 0 0 0 chr5 44095219 44095239 -155534911 + (TG)n Simple_repeat Simple_repeat 1 20 0 370 231 22 22 chr5 44095240 44095331 -155534819 + MLT1A1 LTR MaLR 26 116 -249 4426 192 50 7 chr5 44095347 44096174 -155533976 + L1MA2 LINE L1 17 878 -6687 * 15771 158 15 10 chr5 44096159 44101012 -155529138 + L1MA2 LINE L1 2806 7685 -38 234 158 0 0 chr5 44101025 44101063 -155529087 - L1M1 LINE L1 -442 5862 5825 * 274 51 0 0 chr5 44101062 44101101 -155529049 + L1MA2 LINE L1 7685 7723 0 643 214 55 39 chr5 44101137 44101319 -155528831 + MLT1A1 LTR MaLR 170 354 -11 5374 136 17 25 chr5 44101774 44102613 -155527537 - L1PA15 LINE L1 -8 6157 5315 2598 80 119 5 chr5 44102613 44103015 -155527135 - LTR7 LTR ERV1 -2 448 1 5374 136 17 25 chr5 44103015 44103633 -155526517 - L1PA15 LINE L1 -850 5315 4693 374 385 91 23 chr5 44103934 44104362 -155525788 + L2 LINE L2 2852 3308 -5 372 270 133 52 chr5 44104591 44104824 -155525326 - MER110A LTR ERV1 0 468 217 255 61 0 0 chr5 44104851 44104884 -155525266 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 263 221 39 0 chr5 44105656 44105733 -155524417 - MER116 DNA Mariner 0 80 1 224 254 142 65 chr5 44105733 44105902 -155524248 - MIR3 SINE MIR -14 194 13 32 57 0 0 chr5 44106655 44106708 -155523442 + AT_rich Low_complexity Low_complexity 1 53 0 344 269 87 20 chr5 44106736 44106885 -155523265 + L1ME LINE L1 5491 5645 -519 445 257 28 73 chr5 44107167 44107227 -155522923 - L1ME1 LINE L1 -6 6160 6099 2829 16 0 0 chr5 44107227 44107539 -155522611 - AluYb8 SINE Alu -6 312 1 445 257 28 73 chr5 44107539 44107712 -155522438 - L1ME1 LINE L1 -67 6099 5938 242 220 0 34 chr5 44107832 44107891 -155522259 + LTR33A LTR ERVL 62 118 -405 2682 263 14 41 chr5 44107956 44108738 -155521412 - L1M4 LINE L1 -5774 768 8 22 35 0 0 chr5 44108979 44109008 -155521142 + AT_rich Low_complexity Low_complexity 1 29 0 2312 76 0 10 chr5 44109459 44109750 -155520400 + AluY SINE Alu 1 288 -23 180 0 0 0 chr5 44109757 44109777 -155520373 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 281 81 0 0 chr5 44110246 44110283 -155519867 - HSMAR1 DNA Mariner 0 1287 1251 855 354 85 44 chr5 44111186 44111638 -155518512 - L2 LINE L2 -675 2639 2207 1961 143 3 0 chr5 44111638 44111938 -155518212 + AluSx SINE Alu 1 301 -11 855 354 85 44 chr5 44111938 44112423 -155517727 - L2 LINE L2 -1107 2207 1663 894 174 52 19 chr5 44112447 44112659 -155517491 + L1MA6 LINE L1 6082 6300 0 949 67 17 34 chr5 44112730 44112924 -155517226 + (GAAA)n Simple_repeat Simple_repeat 1 365 0 949 67 17 34 chr5 44112924 44113102 -155517048 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 1518 216 111 23 chr5 44113274 44113625 -155516525 + MLT2B1 LTR ERVL 1 382 -138 525 55 0 0 chr5 44113660 44113733 -155516417 + (GA)n Simple_repeat Simple_repeat 2 74 0 1101 267 63 31 chr5 44113742 44114187 -155515963 + L1ME3 LINE L1 1489 1947 -4449 516 296 79 32 chr5 44114208 44114581 -155515569 + L1ME3 LINE L1 5065 5457 -758 414 324 73 21 chr5 44114699 44114986 -155515164 + L1ME3 LINE L1 5595 5896 -335 2153 165 43 30 chr5 44116538 44117083 -155513067 + MLT2A2 LTR ERVL 1 554 0 1405 200 23 42 chr5 44118545 44118855 -155511295 + AluJb SINE Alu 1 304 -8 636 316 34 17 chr5 44118961 44119195 -155510955 + MIR SINE MIR 13 250 -12 969 149 12 0 chr5 44119511 44119672 -155510478 + U1 snRNA snRNA 1 163 -2 287 250 33 100 chr5 44120655 44120775 -155509375 + MIR3 SINE MIR 82 193 -15 252 0 0 0 chr5 44121603 44121631 -155508519 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 484 232 219 0 chr5 44122918 44123073 -155507077 + MER5A DNA MER1_type 1 189 0 2300 110 36 3 chr5 44123149 44123505 -155506645 - L1PB1 LINE L1 -1 6150 5783 467 59 30 40 chr5 44123506 44123607 -155506543 + (TA)n Simple_repeat Simple_repeat 2 101 0 199 0 0 61 chr5 44123698 44123731 -155506419 + (TA)n Simple_repeat Simple_repeat 1 31 0 505 172 9 38 chr5 44123731 44123838 -155506312 - L1PB1 LINE L1 -377 5777 5678 * 1061 113 5 0 chr5 44123779 44123950 -155506200 + L1PB1 LINE L1 5528 5704 -447 303 348 11 26 chr5 44125020 44125200 -155504950 + MER5A DNA MER1_type 7 173 -5 961 244 162 42 chr5 44125412 44125843 -155504307 - MLT1D LTR MaLR -22 483 1 286 346 60 17 chr5 44127088 44127268 -155502882 - MIR3 SINE MIR -36 172 7 36 23 0 0 chr5 44128045 44128088 -155502062 + AT_rich Low_complexity Low_complexity 1 43 0 897 205 0 0 chr5 44129612 44129773 -155500377 + AluSg/x SINE Alu 137 297 -15 21 0 0 0 chr5 44129780 44129801 -155500349 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr5 44130009 44130037 -155500113 + AT_rich Low_complexity Low_complexity 1 28 0 2024 175 2 53 chr5 44131478 44131889 -155498261 - MLT1B LTR MaLR 0 390 1 486 279 105 8 chr5 44132250 44132535 -155497615 + L1ME LINE L1 5256 5575 -595 772 321 138 32 chr5 44132741 44133271 -155496879 - L3 LINE CR1 -265 1312 727 195 139 0 0 chr5 44133306 44133342 -155496808 + (TG)n Simple_repeat Simple_repeat 1 36 0 247 260 0 0 chr5 44133350 44133427 -155496723 + (TA)n Simple_repeat Simple_repeat 1 77 0 22 0 0 0 chr5 44133773 44133795 -155496355 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 44134087 44134110 -155496040 + AT_rich Low_complexity Low_complexity 1 23 0 391 286 20 14 chr5 44134137 44134284 -155495866 - MER103 DNA DNA -16 150 3 184 290 140 11 chr5 44134344 44134437 -155495713 - L2 LINE L2 -769 2545 2441 263 313 28 16 chr5 44135397 44135517 -155494633 + MIR SINE MIR 36 153 -64 1101 295 57 26 chr5 44137382 44137806 -155492344 + LTR16C LTR ERVL 53 489 -2 187 337 92 0 chr5 44137811 44137909 -155492241 - L2 LINE L2 -30 3283 3177 904 355 37 9 chr5 44138305 44138654 -155491496 - LTR16A LTR ERVL -26 424 66 333 212 24 35 chr5 44139553 44139638 -155490512 + MIR3 SINE MIR 118 201 -7 604 203 65 54 chr5 44139998 44140222 -155489928 - LTR45 LTR ERV1 -8 609 302 1655 180 76 59 chr5 44140580 44140645 -155489505 - MLT2B1 LTR ERVL -8 512 450 228 100 0 0 chr5 44140645 44140685 -155489465 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1655 180 76 59 chr5 44140685 44140707 -155489443 - MLT2B1 LTR ERVL -70 450 430 2126 143 0 6 chr5 44140707 44141021 -155489129 - AluSx SINE Alu 0 312 1 1655 180 76 59 chr5 44141021 44141383 -155488767 - MLT2B1 LTR ERVL -90 430 1 622 333 95 26 chr5 44141681 44142144 -155488006 + L2 LINE L2 1958 2452 -862 2425 88 0 0 chr5 44143649 44143955 -155486195 - AluSq SINE Alu -7 306 1 25 95 0 0 chr5 44144632 44144706 -155485444 + AT_rich Low_complexity Low_complexity 1 74 0 372 315 91 59 chr5 44144905 44145563 -155484587 - L1MC4a LINE L1 -1875 5933 5255 22 56 0 0 chr5 44145648 44145684 -155484466 + AT_rich Low_complexity Low_complexity 1 36 0 31870 89 9 7 chr5 44146692 44147665 -155482485 - L1PA6 LINE L1 0 6154 5184 207 0 0 0 chr5 44147665 44147688 -155482462 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 31870 89 9 7 chr5 44147688 44152134 -155478016 - L1PA6 LINE L1 -970 5184 724 396 319 65 35 chr5 44153462 44153631 -155476519 - LTR16C LTR ERVL -167 324 151 21 36 0 0 chr5 44153958 44153986 -155476164 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 44154078 44154109 -155476041 + AT_rich Low_complexity Low_complexity 1 31 0 753 371 75 1 chr5 44154396 44154835 -155475315 + L2 LINE L2 2592 3065 -207 180 353 0 0 chr5 44155132 44155200 -155474950 - L2 LINE L2 -961 2353 2286 * 863 305 8 30 chr5 44155185 44155447 -155474703 + MIR SINE MIR 7 262 0 2299 114 0 0 chr5 44155463 44155762 -155474388 - AluSx SINE Alu -13 299 1 1864 150 10 7 chr5 44157392 44157698 -155472452 - AluJo SINE Alu -5 307 1 180 97 0 0 chr5 44157842 44157873 -155472277 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 211 294 0 0 chr5 44160683 44160751 -155469399 + T-rich Low_complexity Low_complexity 1 68 0 409 322 17 0 chr5 44161554 44161672 -155468478 + L2 LINE L2 3151 3270 -2 186 71 0 0 chr5 44161926 44161954 -155468196 + (TC)n Simple_repeat Simple_repeat 2 29 0 308 259 55 34 chr5 44163000 44163132 -155467018 + MIR SINE MIR 8 146 -62 255 61 0 0 chr5 44163505 44163538 -155466612 + (TATG)n Simple_repeat Simple_repeat 3 35 0 2199 162 6 3 chr5 44163538 44163903 -155466247 - MER47A DNA MER2_type 0 366 1 252 272 12 0 chr5 44163933 44164014 -155466136 + (TA)n Simple_repeat Simple_repeat 2 83 0 378 265 13 40 chr5 44164095 44164246 -155465904 - MER103 DNA DNA -4 162 16 1183 176 19 159 chr5 44164344 44164758 -155465392 + MLT1A1 LTR MaLR 5 360 -5 22 0 0 0 chr5 44165586 44165608 -155464542 + AT_rich Low_complexity Low_complexity 1 22 0 439 276 148 35 chr5 44165650 44165940 -155464210 + L1MEd LINE L1 844 1166 -4953 1163 288 44 28 chr5 44165954 44166536 -155463614 + L2 LINE L2 2714 3309 -4 284 325 48 32 chr5 44166777 44166903 -155463247 - MIR SINE MIR -112 150 23 612 203 65 0 chr5 44167238 44167361 -155462789 + MLT1L LTR MaLR 149 279 -336 275 280 32 21 chr5 44167912 44168005 -155462145 - MIR SINE MIR -83 125 32 336 261 33 11 chr5 44168067 44168159 -155461991 - MIR SINE MIR -83 125 32 584 330 27 21 chr5 44168702 44168890 -155461260 + MIR SINE MIR 1 189 -73 393 231 99 16 chr5 44168902 44169023 -155461127 + MIR SINE MIR 132 262 0 240 335 90 57 chr5 44169067 44169401 -155460749 - L2 LINE L2 -23 3290 2946 1832 167 0 0 chr5 44170085 44170378 -155459772 + AluSx SINE Alu 1 293 -19 348 250 45 30 chr5 44171189 44171321 -155458829 + L1MEd LINE L1 1021 1154 -4965 267 275 92 37 chr5 44171421 44171530 -155458620 - L2 LINE L2 -5 3308 3194 1376 223 7 4 chr5 44172676 44172949 -155457201 - AluJo SINE Alu -23 289 16 1851 143 61 30 chr5 44173171 44173534 -155456616 - THE1C LTR MaLR 0 375 2 301 302 69 48 chr5 44174492 44174681 -155455469 + MIR SINE MIR 14 206 -56 22 35 0 0 chr5 44174696 44174725 -155455425 + AT_rich Low_complexity Low_complexity 1 29 0 808 279 79 0 chr5 44174850 44175079 -155455071 + MIR SINE MIR 6 252 -10 2861 112 11 20 chr5 44175587 44176025 -155454125 - MER57B LTR ERV1 0 434 1 1487 113 121 0 chr5 44176025 44176256 -155453894 - MER57B-int LTR ERV1 0 7537 7279 733 132 23 23 chr5 44176256 44176385 -155453765 - LTR54B LTR ERV1 -367 131 3 6892 123 54 10 chr5 44176391 44178127 -155452023 - MER57B-int LTR ERV1 -486 7330 5309 5634 147 44 28 chr5 44178132 44179797 -155450353 - MER57B-int LTR ERV1 -1720 3836 2186 252 137 59 0 chr5 44179793 44179844 -155450306 - MER57B-int LTR ERV1 -3726 2220 2167 * 4331 161 79 10 chr5 44179840 44181279 -155448871 - MER57B-int LTR ERV1 -2904 1976 288 * 4413 134 21 8 chr5 44181273 44181939 -155448211 - MER57B-int LTR ERV1 -6862 675 1 2774 105 26 26 chr5 44181943 44182372 -155447778 - MER57B LTR ERV1 -4 430 2 246 95 0 0 chr5 44182468 44182510 -155447640 + (TGGA)n Simple_repeat Simple_repeat 2 43 0 6344 152 53 9 chr5 44183640 44184819 -155445331 - Tigger3b DNA MER2_type 0 1231 1 704 212 92 48 chr5 44185423 44185715 -155444435 + L1MDa LINE L1 1295 1599 -4941 635 259 0 0 chr5 44185717 44185848 -155444302 + FLAM_A SINE Alu 1 131 -2 35936 98 11 9 chr5 44185856 44191996 -155438154 + L1PA6 LINE L1 3 6153 -1 3031 133 14 9 chr5 44191992 44192574 -155437576 + L1PB1 LINE L1 5098 5792 -359 * 182 36 0 36 chr5 44192574 44192602 -155437548 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 3031 133 14 9 chr5 44192602 44192964 -155437186 + L1PB1 LINE L1 5792 6151 0 1036 214 36 16 chr5 44192965 44193217 -155436933 + L1M4 LINE L1 4692 4948 -1198 429 292 34 6 chr5 44193234 44193412 -155436738 + L1M4 LINE L1 5084 5266 -880 3379 240 45 13 chr5 44193417 44194472 -155435678 + L1M4 LINE L1 3067 4154 -1992 806 144 11 249 chr5 44194445 44194827 -155435323 + L1MB8 LINE L1 5643 5933 -245 * 302 336 42 21 chr5 44195752 44195895 -155434255 - L2 LINE L2 -1 3312 3167 377 295 146 81 chr5 44197455 44197824 -155432326 - L2 LINE L2 0 3272 2921 327 93 27 53 chr5 44197832 44197907 -155432243 + (GGAA)n Simple_repeat Simple_repeat 3 75 0 7377 252 28 43 chr5 44197926 44200350 -155429800 + L1MA4A LINE L1 2 2388 -4461 9888 185 68 22 chr5 44200367 44202033 -155428117 + L1MA4A LINE L1 3308 5151 -1821 1493 190 17 48 chr5 44202033 44202322 -155427828 + AluJo SINE Alu 1 280 -32 9888 185 68 22 chr5 44202322 44203441 -155426709 + L1MA4A LINE L1 5151 6217 -755 1242 141 141 0 chr5 44203448 44203696 -155426454 + L1MA4A LINE L1 6341 6623 -382 6687 175 101 35 chr5 44203983 44205554 -155424596 + MER52A LTR ERV1 1 1753 -2 279 296 23 0 chr5 44205613 44205701 -155424449 - MIR SINE MIR -12 250 161 4215 98 27 27 chr5 44205715 44206350 -155423800 - MER41B LTR ERV1 0 635 1 299 167 0 0 chr5 44206676 44206724 -155423426 + Alu SINE Alu 234 281 -21 239 220 34 17 chr5 44207426 44207485 -155422665 + GA-rich Low_complexity Low_complexity 4 63 0 328 350 64 9 chr5 44207611 44207831 -155422319 - MIR SINE MIR -1 261 30 2339 97 0 7 chr5 44207981 44208281 -155421869 - AluSg SINE Alu -12 298 1 315 71 0 0 chr5 44208345 44208387 -155421763 + (CA)n Simple_repeat Simple_repeat 1 42 0 413 307 118 64 chr5 44209731 44210197 -155419953 + L1MEd LINE L1 478 968 -5237 1319 274 148 58 chr5 44210257 44211587 -155418563 + HAL1 LINE L1 15 1464 -1043 290 278 37 9 chr5 44212025 44212133 -155418017 + MER114 LTR ERV 2 112 -536 204 289 0 19 chr5 44212200 44212252 -155417898 - L2 LINE L2 -2 3311 3261 2242 94 3 0 chr5 44212300 44212587 -155417563 + AluSx SINE Alu 24 311 -1 2766 133 4 20 chr5 44212594 44213046 -155417104 - L1PA15 LINE L1 -16 6149 5705 7737 171 26 13 chr5 44213046 44213801 -155416349 + ERVL-D LTR ERVL 2223 3006 -2758 2465 122 89 0 chr5 44213801 44214194 -155415956 + MSTA LTR MaLR 1 428 0 7737 171 26 13 chr5 44214194 44214885 -155415265 + ERVL-D LTR ERVL 3006 3687 -2077 7222 172 28 15 chr5 44214874 44216239 -155413911 + ERVL-D LTR ERVL 4374 5755 -9 * 1021 174 11 0 chr5 44216241 44216425 -155413725 + MLT2D LTR ERVL 1 186 -228 411 68 0 0 chr5 44216440 44216499 -155413651 + (TCTA)n Simple_repeat Simple_repeat 1 59 0 331 102 0 0 chr5 44216500 44216549 -155413601 + MLT2C2 LTR ERVL 413 461 -3 278 310 40 10 chr5 44216563 44216663 -155413487 + L1ME3A LINE L1 5963 6065 -105 279 271 75 28 chr5 44216769 44216983 -155413167 + L1MEd LINE L1 1051 1274 -4931 814 219 71 30 chr5 44217059 44217234 -155412916 - MSTD LTR MaLR -2 394 228 2399 137 39 0 chr5 44217234 44217593 -155412557 - THE1C LTR MaLR 0 375 3 814 219 71 30 chr5 44217593 44217762 -155412388 - MSTD LTR MaLR -168 228 1 2840 235 77 21 chr5 44217767 44218495 -155411655 - MSTD-int LTR MaLR -6 1729 961 * 3655 197 18 12 chr5 44218473 44219243 -155410907 - MSTD-int LTR MaLR -959 776 2 958 204 65 27 chr5 44219244 44219581 -155410569 - MSTD LTR MaLR 0 396 6 4879 179 13 14 chr5 44219675 44221015 -155409135 + L1PA16 LINE L1 4221 5554 -612 2295 144 52 25 chr5 44221016 44221459 -155408691 + L1PA16 LINE L1 5710 6164 -2 304 293 92 24 chr5 44221460 44221624 -155408526 + L1MEd LINE L1 1546 1720 -4676 1695 181 48 0 chr5 44222560 44222735 -155407415 - AluJo SINE Alu -3 309 113 297 0 0 0 chr5 44222735 44222768 -155407382 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1695 181 48 0 chr5 44222768 44222885 -155407265 - AluJo SINE Alu -199 113 3 462 277 25 43 chr5 44223100 44223335 -155406815 - L1MDa LINE L1 -2045 4495 4265 332 304 64 8 chr5 44223520 44223645 -155406505 - L1MDa LINE L1 -2381 4159 4028 403 268 25 46 chr5 44223723 44223962 -155406188 - L1MDa LINE L1 -3625 2915 2682 328 293 41 34 chr5 44223971 44224118 -155406032 - L1MDa LINE L1 -3942 2598 2451 313 257 89 10 chr5 44224111 44224212 -155405938 - L1MDa LINE L1 -4941 1589 1481 * 510 170 11 0 chr5 44224287 44224381 -155405769 - L1MDa LINE L1 -5987 543 449 233 348 22 22 chr5 44224419 44224511 -155405639 + MIR SINE MIR 41 132 -76 2146 115 0 3 chr5 44224582 44224878 -155405272 - AluSc SINE Alu -2 307 13 199 227 134 62 chr5 44224994 44225091 -155405059 + MIR SINE MIR 34 137 -71 588 248 96 54 chr5 44225618 44225932 -155404218 - LTR16A1 LTR ERVL -130 327 1 22 0 0 0 chr5 44226786 44226808 -155403342 + AT_rich Low_complexity Low_complexity 1 22 0 760 168 0 8 chr5 44226808 44226933 -155403217 - AluJb SINE Alu -188 124 1 504 332 25 25 chr5 44227108 44227346 -155402804 - MIR SINE MIR 0 262 25 228 86 0 0 chr5 44228254 44228289 -155401861 + (A)n Simple_repeat Simple_repeat 1 35 0 400 100 143 0 chr5 44228436 44228506 -155401644 - MADE1 DNA Mariner 0 80 1 298 302 149 18 chr5 44228754 44228976 -155401174 + MER102b DNA MER1_type 73 323 -18 1561 163 33 118 chr5 44229739 44230138 -155400012 - MLT1A1 LTR MaLR 0 365 1 218 269 215 0 chr5 44230405 44230498 -155399652 - L2 LINE L2 0 3272 3160 493 225 246 0 chr5 44230608 44230746 -155399404 - MER5A DNA MER1_type 0 189 18 218 293 17 0 chr5 44231474 44231532 -155398618 - MER5B DNA MER1_type -46 132 74 1324 191 71 76 chr5 44233288 44233655 -155396495 + MLT1A1 LTR MaLR 1 365 0 198 325 26 44 chr5 44233833 44233947 -155396203 + MIR SINE MIR 99 210 -52 1055 173 66 0 chr5 44234086 44234283 -155395867 + MER6B DNA MER2_type 1 210 0 422 316 65 36 chr5 44236335 44236503 -155393647 - MER5A DNA MER1_type -5 184 12 839 199 0 75 chr5 44236542 44236728 -155393422 + MER5A DNA MER1_type 3 174 -15 1258 172 52 26 chr5 44236737 44237045 -155393105 + MER33 DNA MER1_type 9 324 0 951 218 69 0 chr5 44237075 44237277 -155392873 + MER20 DNA MER1_type 1 216 -3 465 243 24 89 chr5 44237295 44237464 -155392686 + MER5B DNA MER1_type 20 177 -1 278 211 18 0 chr5 44237532 44237589 -155392561 - MER5A DNA MER1_type -108 81 24 2320 91 17 0 chr5 44237985 44238283 -155391867 + AluSg SINE Alu 1 303 -7 295 275 86 94 chr5 44238618 44238851 -155391299 + L2 LINE L2 3079 3309 -4 323 345 30 12 chr5 44239042 44239207 -155390943 - L2 LINE L2 -420 2894 2727 352 311 155 20 chr5 44239407 44239555 -155390595 + MER5A DNA MER1_type 22 189 0 869 273 34 72 chr5 44239987 44240401 -155389749 + L2 LINE L2 2911 3308 -5 590 304 109 9 chr5 44240424 44240644 -155389506 + MIR SINE MIR 2 243 -19 405 309 71 36 chr5 44240844 44241012 -155389138 - MIR3 SINE MIR -11 197 24 358 328 86 40 chr5 44241078 44241252 -155388898 - MIR3 SINE MIR -11 197 16 448 275 65 30 chr5 44243099 44243299 -155386851 + MIR SINE MIR 1 207 -55 346 304 12 71 chr5 44244896 44245064 -155385086 + MER5A DNA MER1_type 17 174 -15 205 276 146 60 chr5 44245056 44245241 -155384909 + L3b LINE CR1 1149 1349 -234 * 207 0 0 0 chr5 44245774 44245797 -155384353 + (A)n Simple_repeat Simple_repeat 1 23 0 882 179 92 5 chr5 44245972 44246167 -155383983 - MER20 DNA MER1_type -1 218 7 575 304 119 5 chr5 44246625 44246826 -155383324 + MIR SINE MIR 25 248 -14 283 301 57 24 chr5 44247403 44247526 -155382624 + L2 LINE L2 2941 3067 -205 309 317 50 17 chr5 44247698 44247818 -155382332 + L2 LINE L2 3189 3312 -1 22 56 0 0 chr5 44248018 44248054 -155382096 + AT_rich Low_complexity Low_complexity 1 36 0 258 294 65 11 chr5 44248077 44248169 -155381981 - MIR SINE MIR -48 214 118 305 137 0 0 chr5 44248645 44248696 -155381454 + MADE1 DNA Mariner 30 80 0 246 81 0 0 chr5 44249155 44249192 -155380958 + (TG)n Simple_repeat Simple_repeat 2 38 0 320 296 25 54 chr5 44249245 44249559 -155380591 - L1ME4a LINE L1 -218 5903 5599 1564 173 30 12 chr5 44249779 44250144 -155380006 + MER47B DNA MER2_type 1 418 0 609 304 59 32 chr5 44250144 44250252 -155379898 - LTR16C LTR ERVL -56 435 331 433 278 9 17 chr5 44250252 44250367 -155379783 + MER81 DNA DNA 1 114 0 609 304 59 32 chr5 44250367 44250596 -155379554 - LTR16C LTR ERVL -160 331 89 236 220 20 50 chr5 44251059 44251159 -155378991 + (TA)n Simple_repeat Simple_repeat 2 98 0 1040 99 0 0 chr5 44251206 44251358 -155378792 - L1MA4 LINE L1 -69 6231 6080 252 310 28 0 chr5 44252108 44252179 -155377971 - MIR SINE MIR -55 153 81 333 283 0 20 chr5 44252683 44252782 -155377368 - L1MC4 LINE L1 -1334 6708 6612 300 294 11 11 chr5 44252703 44252795 -155377355 + L1MC4 LINE L1 6612 6703 -1339 * 231 36 0 0 chr5 44253447 44253475 -155376675 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 1330 134 222 57 chr5 44253811 44253962 -155376188 + MSTA LTR MaLR 1 126 -302 2021 118 0 4 chr5 44253962 44254284 -155375866 - AluSg SINE Alu 0 321 1 1330 134 222 57 chr5 44254284 44254482 -155375668 + MSTA LTR MaLR 126 409 -19 1941 166 3 0 chr5 44257690 44257985 -155372165 + AluJb SINE Alu 1 296 -16 1683 226 100 36 chr5 44258367 44258889 -155371261 + MLT1H1 LTR MaLR 1 555 0 256 363 44 0 chr5 44259133 44259224 -155370926 - L2 LINE L2 -9 3263 3169 1263 228 100 6 chr5 44259289 44259600 -155370550 - MER58B DNA MER1_type 0 341 2 2100 182 37 47 chr5 44261691 44262201 -155367949 + MLT1D LTR MaLR 1 505 0 694 181 0 55 chr5 44262431 44262558 -155367592 + FLAM_A SINE Alu 1 120 -13 197 0 0 67 chr5 44262565 44262595 -155367555 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 738 261 31 15 chr5 44262771 44262966 -155367184 + MIR SINE MIR 40 237 -25 209 309 118 62 chr5 44263278 44263456 -155366694 + MER5A DNA MER1_type 2 189 0 218 313 0 60 chr5 44264353 44264436 -155365714 - MER5A DNA MER1_type -105 84 7 288 0 0 0 chr5 44264953 44264985 -155365165 + (TGG)n Simple_repeat Simple_repeat 3 34 0 525 309 121 53 chr5 44265469 44265883 -155364267 - L1ME4a LINE L1 -218 5903 5462 322 300 50 10 chr5 44266142 44266242 -155363908 - MIR SINE MIR 0 262 159 1616 240 62 5 chr5 44266247 44266684 -155363466 + MLT1C LTR MaLR 6 467 0 354 254 144 0 chr5 44266707 44266823 -155363327 - MIR SINE MIR -72 136 4 2185 166 48 52 chr5 44266840 44267322 -155362828 - LTR26B LTR ERV1 0 531 52 35463 91 12 7 chr5 44267324 44273429 -155356721 - L1PA6 LINE L1 -7 6147 11 431 310 39 19 chr5 44273476 44273631 -155356519 + MIR3 SINE MIR 36 193 -15 267 288 71 65 chr5 44274135 44274305 -155355845 - MIR SINE MIR 0 262 92 225 229 205 12 chr5 44274296 44274379 -155355771 - L2 LINE L2 0 3272 3174 * 3593 110 8 4 chr5 44275345 44275854 -155354296 + MER9 LTR ERVK 1 511 0 621 40 0 0 chr5 44276478 44276554 -155353596 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 1454 168 42 54 chr5 44277014 44277348 -155352802 + MER2 DNA MER2_type 1 330 -15 1814 150 0 41 chr5 44277373 44277667 -155352483 - AluJo SINE Alu -30 282 1 373 317 126 13 chr5 44278185 44278415 -155351735 - MIR SINE MIR -5 257 2 207 328 206 13 chr5 44278759 44278997 -155351153 + L2 LINE L2 2682 2965 -349 189 107 0 0 chr5 44279461 44279489 -155350661 + (CA)n Simple_repeat Simple_repeat 1 28 0 265 261 269 8 chr5 44282468 44282598 -155347552 + L3 LINE CR1 1250 1413 -164 333 315 0 0 chr5 44334185 44334277 -155295873 - L1MC4 LINE L1 -1337 6705 6614 * 337 261 0 22 chr5 44334199 44334291 -155295859 + L1MC4 LINE L1 6614 6703 -1339 7543 186 11 13 chr5 44334293 44336280 -155293870 - L1P5 LINE L1 -564 5587 3611 185 423 32 0 chr5 44337592 44337715 -155292435 - L3 LINE CR1 -23 1554 1428 284 197 0 84 chr5 44337743 44337759 -155292391 + MIR SINE MIR 195 211 -51 2078 117 71 31 chr5 44337759 44338109 -155292041 - THE1B LTR MaLR 0 364 1 284 197 0 84 chr5 44338109 44338163 -155291987 + MIR SINE MIR 211 259 -3 1820 51 21 0 chr5 44339267 44339504 -155290646 - L1PB1 LINE L1 0 6151 5910 1729 169 3 7 chr5 44340691 44340975 -155289175 + AluJb SINE Alu 1 283 -29 2436 126 17 0 chr5 44341559 44341917 -155288233 + THE1B LTR MaLR 1 364 0 455 175 25 0 chr5 44342021 44342101 -155288049 + L1PB4 LINE L1 6057 6138 -18 12171 57 2 0 chr5 44342186 44344506 -155285644 - L1PA6 LINE L1 -6 6148 3816 695 191 37 56 chr5 44344606 44344768 -155285382 - MIR SINE MIR -10 252 94 553 291 133 40 chr5 44344820 44345143 -155285007 - L3 LINE CR1 -7 1570 1218 189 268 54 0 chr5 44345164 44345220 -155284930 + L2 LINE L2 2695 2753 -561 809 238 133 47 chr5 44345271 44345633 -155284517 - MLT1J1 LTR MaLR -47 399 7 215 390 112 4 chr5 44345640 44345889 -155284261 + L2 LINE L2 2821 3096 -176 29 47 0 0 chr5 44345919 44345962 -155284188 + AT_rich Low_complexity Low_complexity 1 43 0 208 333 83 49 chr5 44346043 44346187 -155283963 + L2 LINE L2 2598 2746 -568 512 315 0 14 chr5 44346213 44346356 -155283794 - MER5A DNA MER1_type -48 141 1 221 374 26 0 chr5 44346458 44346573 -155283577 + L2 LINE L2 2933 3050 -222 4836 184 14 29 chr5 44346882 44347871 -155282279 + MER21-int LTR ERV1 2912 3885 -306 7860 106 15 0 chr5 44347971 44349130 -155281020 - L1P3 LINE L1 -5285 1176 1 23 0 0 0 chr5 44349504 44349527 -155280623 + AT_rich Low_complexity Low_complexity 1 23 0 4075 93 17 21 chr5 44349528 44349881 -155280269 - L1PB1 LINE L1 -15 6136 5786 2239 115 0 31 chr5 44349881 44350202 -155279948 - AluSq SINE Alu -2 311 1 4075 93 17 21 chr5 44350202 44350452 -155279698 - L1PB1 LINE L1 -365 5786 5536 181 211 0 96 chr5 44350858 44350910 -155279240 + L2 LINE L2 3221 3267 -5 204 274 119 36 chr5 44351114 44351198 -155278952 - MER5A DNA MER1_type -6 183 93 * 924 196 82 14 chr5 44351139 44351358 -155278792 + MIR SINE MIR 8 241 -21 298 379 8 0 chr5 44352027 44352151 -155277999 + MIR3 SINE MIR 51 175 -33 288 333 28 9 chr5 44352710 44352818 -155277332 + MIR3 SINE MIR 68 177 -31 838 18 0 0 chr5 44353153 44353262 -155276888 - L1P LINE L1 -752 5403 5295 * 3835 11 0 2 chr5 44353260 44353697 -155276453 + L1PA3 LINE L1 5395 5830 -325 1916 181 40 32 chr5 44353949 44354490 -155275660 + MLT2A2 LTR ERVL 1 553 -1 416 289 91 50 chr5 44355674 44355894 -155274256 - MLT1L LTR MaLR 0 615 406 2176 103 0 17 chr5 44355894 44356194 -155273956 + AluSx SINE Alu 1 295 -17 416 289 91 50 chr5 44356194 44356378 -155273772 - MLT1L LTR MaLR -209 406 120 252 59 0 0 chr5 44356552 44356586 -155273564 + (CA)n Simple_repeat Simple_repeat 2 35 0 256 300 0 0 chr5 44357635 44357695 -155272455 + MIR SINE MIR 90 149 -59 2194 105 3 0 chr5 44357971 44358266 -155271884 + AluSg1 SINE Alu 1 296 -13 202 232 0 36 chr5 44358529 44358585 -155271565 + (TCTCTG)n Simple_repeat Simple_repeat 6 59 0 225 151 38 0 chr5 44359152 44359205 -155270945 + (TATAG)n Simple_repeat Simple_repeat 2 56 0 213 304 142 20 chr5 44359850 44359998 -155270152 - L2 LINE L2 -4 3309 3144 835 32 16 58 chr5 44360356 44360544 -155269606 + (TA)n Simple_repeat Simple_repeat 1 180 0 2935 60 21 8 chr5 44360544 44360928 -155269222 - MLT2A1 LTR ERVL -55 389 1 664 105 11 0 chr5 44360928 44361023 -155269127 + MER21A LTR ERV1 481 576 -355 2347 272 77 52 chr5 44361070 44362233 -155267917 + L1PBa LINE L1 412 1603 -5260 1434 149 23 0 chr5 44362233 44362454 -155267696 + AluJb SINE Alu 81 306 -6 2175 128 8 14 chr5 44362454 44362844 -155267306 + L1PB3 LINE L1 692 1079 -5125 7421 202 37 76 chr5 44362860 44364266 -155265884 + L1PB3 LINE L1 3169 4437 -1778 384 22 0 0 chr5 44364266 44364311 -155265839 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 7421 202 37 76 chr5 44364311 44365264 -155264886 + L1PB3 LINE L1 4437 5426 -789 5102 134 10 4 chr5 44365536 44366343 -155263807 + L1PB3 LINE L1 5395 6206 -5 554 148 20 10 chr5 44366719 44366820 -155263330 + MLT1F1 LTR MaLR 1 102 -465 3312 20 2 8 chr5 44366922 44367315 -155262835 + L1PA3 LINE L1 5765 6155 0 579 281 51 23 chr5 44367630 44367847 -155262303 - L2 LINE L2 0 3313 3091 452 312 51 13 chr5 44367873 44368030 -155262120 - MIR3 SINE MIR -39 169 7 228 122 0 0 chr5 44368762 44368803 -155261347 + (GA)n Simple_repeat Simple_repeat 1 41 0 2480 147 19 23 chr5 44369745 44370173 -155259977 - MSTB LTR MaLR 0 426 1 497 268 115 13 chr5 44371040 44371197 -155258953 + MER5B DNA MER1_type 1 173 -5 210 37 0 0 chr5 44371360 44371387 -155258763 + (TTA)n Simple_repeat Simple_repeat 2 28 0 248 331 91 19 chr5 44371606 44371760 -155258390 - L2 LINE L2 -817 2497 2333 508 300 83 0 chr5 44372053 44372233 -155257917 + L2 LINE L2 3119 3313 0 522 249 140 64 chr5 44372246 44372427 -155257723 - MIR SINE MIR -63 145 1 233 258 0 65 chr5 44373061 44373123 -155257027 - MIR SINE MIR -56 152 95 380 274 35 0 chr5 44374324 44374437 -155255713 + MER94 DNA DNA 1 117 -17 21 0 0 0 chr5 44374907 44374928 -155255222 + AT_rich Low_complexity Low_complexity 1 21 0 225 273 26 26 chr5 44375002 44375079 -155255071 + L2 LINE L2 3154 3230 -42 498 108 0 0 chr5 44375098 44375172 -155254978 + (TA)n Simple_repeat Simple_repeat 1 74 0 968 198 0 135 chr5 44375185 44375504 -155254646 - AluJo SINE Alu -33 279 4 492 62 0 0 chr5 44375695 44375759 -155254391 + (TA)n Simple_repeat Simple_repeat 1 64 0 1661 123 0 126 chr5 44375760 44376093 -155254057 - AluJb SINE Alu -21 291 1 235 244 78 33 chr5 44376355 44376445 -155253705 - MIR SINE MIR -123 139 46 576 256 91 22 chr5 44377226 44377456 -155252694 + MER112 DNA MER1_type 2 247 -13 1725 237 64 51 chr5 44377716 44378416 -155251734 + HsTC2a DNA Tc2 4 712 -32 2842 223 78 9 chr5 44378419 44379153 -155250997 + L1ME1 LINE L1 5397 6334 0 2189 123 0 0 chr5 44379162 44379463 -155250687 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr5 44379826 44379848 -155250302 + AT_rich Low_complexity Low_complexity 1 22 0 400 240 77 29 chr5 44380175 44380279 -155249871 + MIR SINE MIR 78 186 -76 22 0 0 0 chr5 44380580 44380602 -155249548 + AT_rich Low_complexity Low_complexity 1 22 0 737 76 0 0 chr5 44381607 44381755 -155248395 + L1PA8 LINE L1 6066 6213 0 472 226 161 19 chr5 44383688 44383843 -155246307 + MER5B DNA MER1_type 2 178 0 2102 114 3 3 chr5 44384106 44384403 -155245747 - AluJb SINE Alu -13 299 3 298 260 0 14 chr5 44384853 44384926 -155245224 + L2 LINE L2 3242 3313 0 2115 146 30 30 chr5 44385669 44386033 -155244117 + THE1B LTR MaLR 1 364 0 342 355 36 68 chr5 44386901 44387152 -155242998 + L2 LINE L2 3001 3243 -29 406 326 14 14 chr5 44387274 44387412 -155242738 - MIR3 SINE MIR -60 148 11 1663 167 0 20 chr5 44387982 44388303 -155241847 + AluSx SINE Alu 1 315 0 21 0 0 0 chr5 44388927 44388948 -155241202 + AT_rich Low_complexity Low_complexity 1 21 0 1848 116 8 0 chr5 44389694 44389944 -155240206 - AluSg SINE Alu -58 252 1 183 156 0 0 chr5 44390259 44390291 -155239859 + (CA)n Simple_repeat Simple_repeat 1 32 0 1519 186 14 26 chr5 44391139 44391488 -155238662 - L1MA10 LINE L1 -3 6331 5987 24 0 0 0 chr5 44391619 44391643 -155238507 + AT_rich Low_complexity Low_complexity 1 24 0 3091 45 3 0 chr5 44391643 44392023 -155238127 - L1PA4 LINE L1 -3 6152 5772 18915 37 2 0 chr5 44392023 44394413 -155235737 + L1P2 LINE L1 3072 5466 -689 24 0 0 0 chr5 44394413 44394437 -155235713 + AT_rich Low_complexity Low_complexity 1 24 0 2472 8 0 0 chr5 44394437 44394702 -155235448 + AluYa5 SINE Alu 36 300 -11 1454 146 40 4 chr5 44395046 44395293 -155234857 - Tigger2 DNA MER2_type 0 2718 2463 1936 105 105 0 chr5 44395338 44395605 -155234545 - AluSg SINE Alu -13 297 3 4136 158 35 4 chr5 44395611 44396345 -155233805 - Tigger2 DNA MER2_type -1946 772 16 1690 161 61 26 chr5 44396342 44396684 -155233466 - MLT1B LTR MaLR -9 381 28 * 10427 99 9 3 chr5 44396758 44401763 -155228387 - L1PA7 LINE L1 -1 6153 957 288 0 0 0 chr5 44402601 44402633 -155227517 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 513 130 0 0 chr5 44402643 44402712 -155227438 - FRAM SINE Alu -39 137 69 1969 144 7 3 chr5 44402734 44403039 -155227111 + AluSx SINE Alu 1 306 -6 272 389 70 13 chr5 44403730 44403959 -155226191 + MIR SINE MIR 8 249 -13 2177 117 3 3 chr5 44404139 44404437 -155225713 - AluSx SINE Alu -14 298 1 21 57 0 0 chr5 44404906 44404941 -155225209 + AT_rich Low_complexity Low_complexity 1 35 0 2715 73 6 3 chr5 44405071 44405425 -155224725 + THE1A LTR MaLR 1 355 0 22 35 0 0 chr5 44406206 44406235 -155223915 + AT_rich Low_complexity Low_complexity 1 29 0 581 262 175 55 chr5 44406278 44406770 -155223380 - MLT1H1 LTR MaLR 0 555 5 213 328 0 0 chr5 44406976 44407034 -155223116 - MIR3 SINE MIR -3 205 148 252 0 0 0 chr5 44409548 44409576 -155220574 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 743 174 90 2 chr5 44409709 44409994 -155220156 + MLT1A2 LTR MaLR 5 374 0 2247 286 130 24 chr5 44410445 44411794 -155218356 + L2 LINE L2 1773 3279 -34 1641 195 26 3 chr5 44412154 44412456 -155217694 - AluJb SINE Alu -3 309 1 446 278 74 6 chr5 44412473 44412635 -155217515 + Charlie8 DNA MER1_type 73 245 -2172 329 209 15 0 chr5 44412711 44412778 -155217372 + Charlie8 DNA MER1_type 1349 1416 -1001 515 295 27 0 chr5 44413024 44413173 -155216977 + MIR SINE MIR 20 172 -90 916 66 0 0 chr5 44413318 44413439 -155216711 + L1PA3 LINE L1 6035 6155 0 1974 138 28 0 chr5 44413633 44413922 -155216228 + AluSx SINE Alu 1 297 -15 282 408 85 23 chr5 44413948 44414468 -155215682 + L2 LINE L2 2425 2976 -338 184 279 128 35 chr5 44414625 44414711 -155215439 + MIR3 SINE MIR 9 102 -106 2199 122 0 7 chr5 44414959 44415263 -155214887 - AluSx SINE Alu -9 303 2 2036 135 0 0 chr5 44416106 44416394 -155213756 - AluSx SINE Alu -24 288 1 21 89 0 0 chr5 44416641 44416697 -155213453 + AT_rich Low_complexity Low_complexity 1 56 0 5834 104 36 5 chr5 44416884 44418100 -155212050 + L1PA11 LINE L1 4922 6174 0 300 221 44 0 chr5 44418261 44418329 -155211821 + L2 LINE L2 3242 3312 -1 2391 82 0 0 chr5 44418777 44419071 -155211079 + AluY SINE Alu 1 294 -17 730 236 169 0 chr5 44420160 44420355 -155209795 - MIR SINE MIR -5 257 30 258 32 0 0 chr5 44420520 44420551 -155209599 + (TATG)n Simple_repeat Simple_repeat 1 31 0 295 194 49 70 chr5 44420581 44420699 -155209451 + MLT1D LTR MaLR 5 107 -406 40838 34 21 1 chr5 44420713 44426744 -155203406 - L1PA2 LINE L1 -2 6153 1 1372 212 40 50 chr5 44426768 44427165 -155202985 + MLT1D LTR MaLR 113 505 0 2078 154 0 0 chr5 44427905 44428211 -155201939 + AluSx SINE Alu 1 306 -6 1052 150 5 10 chr5 44428230 44428430 -155201720 + L1PBa LINE L1 2 200 -6663 9727 144 46 8 chr5 44428432 44430557 -155199593 + L1PBa LINE L1 636 3068 -3794 2321 104 0 0 chr5 44430557 44430855 -155199295 + AluSg SINE Alu 1 298 -12 9727 144 46 8 chr5 44430855 44432156 -155197994 + L1PBa LINE L1 3068 4318 -2544 19249 122 24 22 chr5 44432258 44435579 -155194571 - L1P LINE L1 -2809 3337 11 1595 241 69 33 chr5 44436710 44437308 -155192842 + L1ME3A LINE L1 5540 6158 -12 944 195 126 58 chr5 44437386 44437663 -155192487 + AluJo SINE Alu 1 296 -6 351 290 0 21 chr5 44438816 44438909 -155191241 - MIR SINE MIR -102 106 16 390 277 54 0 chr5 44439375 44439505 -155190645 - L2 LINE L2 -1 3312 3176 998 189 16 0 chr5 44439719 44439904 -155190246 + MER5A DNA MER1_type 1 188 -1 323 320 21 72 chr5 44440788 44440982 -155189168 + L1ME LINE L1 5577 5760 -361 338 242 161 48 chr5 44442749 44442935 -155187215 + MIR SINE MIR 44 250 -12 291 269 0 0 chr5 44444403 44444481 -155185669 + MIR SINE MIR 185 262 0 24 77 0 0 chr5 44444564 44444616 -155185534 + AT_rich Low_complexity Low_complexity 1 52 0 227 273 105 17 chr5 44445591 44445763 -155184387 - L1ME4a LINE L1 -167 5954 5768 293 304 27 14 chr5 44446009 44446229 -155183921 + L1ME4a LINE L1 5556 5778 -343 315 308 109 6 chr5 44446311 44446467 -155183683 + L1ME4a LINE L1 5922 6093 -28 269 318 23 39 chr5 44446587 44446716 -155183434 - L2 LINE L2 -222 3050 2924 193 347 104 18 chr5 44446753 44446921 -155183229 - L2 LINE L2 -1342 1972 1820 1641 79 0 0 chr5 44446921 44447136 -155183014 + L1PA8 LINE L1 5955 6169 -3 193 347 104 18 chr5 44447136 44447304 -155182846 - L2 LINE L2 -1494 1820 1607 3837 178 17 20 chr5 44448663 44449523 -155180627 - L1MA8 LINE L1 -863 5283 4426 3798 160 74 13 chr5 44449521 44450358 -155179792 + L1MA8 LINE L1 5282 6169 -122 * 5433 130 43 6 chr5 44450544 44451655 -155178495 + L1MA8 LINE L1 5130 6284 -7 613 242 21 155 chr5 44451863 44452251 -155177899 + L3 LINE CR1 1108 1443 -134 1525 147 11 29 chr5 44452368 44452647 -155177503 - L1MC1 LINE L1 -2 6331 6058 360 316 22 29 chr5 44452650 44452786 -155177364 + MER5A DNA MER1_type 51 185 -4 215 361 0 0 chr5 44452778 44452839 -155177311 + L3 LINE CR1 1516 1576 -1 * 753 253 6 11 chr5 44452939 44453121 -155177029 - MIR SINE MIR -70 192 12 695 275 77 32 chr5 44453568 44453815 -155176335 + MIR SINE MIR 3 260 -2 23 0 0 0 chr5 44454601 44454624 -155175526 + AT_rich Low_complexity Low_complexity 1 23 0 1236 276 74 19 chr5 44456096 44456664 -155173486 + L1ME3A LINE L1 5309 5907 -263 2102 127 3 22 chr5 44456849 44457164 -155172986 + AluSx SINE Alu 1 309 -3 5671 114 3 0 chr5 44457870 44458548 -155171602 - L1PA15 LINE L1 0 6165 5490 189 0 0 0 chr5 44458548 44458569 -155171581 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5671 114 3 0 chr5 44458569 44458592 -155171558 - L1PA15 LINE L1 -675 5490 5469 1655 95 0 5 chr5 44458592 44458802 -155171348 - AluSq SINE Alu -99 214 6 5671 114 3 0 chr5 44458802 44459233 -155170917 - L1PA15 LINE L1 -696 5469 5058 2897 202 33 5 chr5 44459238 44459883 -155170267 - L1PA15 LINE L1 -1336 4810 4148 2025 110 3 17 chr5 44459967 44460258 -155169892 - AluSx SINE Alu -15 297 11 1664 101 0 22 chr5 44460549 44460777 -155169373 + AluSg/x SINE Alu 84 306 -6 1402 321 144 21 chr5 44462072 44462178 -155167972 + L2 LINE L2 189 281 -3033 1856 184 114 26 chr5 44462178 44462607 -155167543 + MLT1C LTR MaLR 1 467 0 1402 321 144 21 chr5 44462607 44463432 -155166718 + L2 LINE L2 281 1234 -2080 3259 299 157 15 chr5 44463445 44465136 -155165014 + L2 LINE L2 579 2509 -805 510 115 0 13 chr5 44466788 44466866 -155163284 - Tigger2 DNA MER2_type -2641 77 1 392 250 0 0 chr5 44466868 44466952 -155163198 - MIR SINE MIR -67 195 112 * 472 216 31 0 chr5 44466951 44467048 -155163102 + MER5A DNA MER1_type 13 112 -77 348 24 0 0 chr5 44467295 44467336 -155162814 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 357 359 0 18 chr5 44467394 44467561 -155162589 - MIR3 SINE MIR 0 208 45 1173 193 103 53 chr5 44468431 44468814 -155161336 + MLT2B1 LTR ERVL 1 363 -157 231 36 0 0 chr5 44468814 44468842 -155161308 + (TG)n Simple_repeat Simple_repeat 1 28 0 501 17 0 0 chr5 44468842 44468900 -155161250 + (TA)n Simple_repeat Simple_repeat 2 59 0 1173 193 103 53 chr5 44468900 44468952 -155161198 + MLT2B1 LTR ERVL 362 503 -17 610 271 111 69 chr5 44469795 44470334 -155159816 + L1M4 LINE L1 2740 3301 -2845 2270 75 0 50 chr5 44470516 44470834 -155159316 + AluY SINE Alu 1 302 -9 2748 56 0 0 chr5 44472379 44472721 -155157429 + L1PA5 LINE L1 5809 6150 -4 222 271 51 93 chr5 44472974 44473092 -155157058 - L2 LINE L2 -10 3303 3191 182 232 53 42 chr5 44474054 44474149 -155156001 + L2 LINE L2 1633 1728 -1586 422 253 0 10 chr5 44474434 44474533 -155155617 + Charlie2b DNA MER1_type 1041 1138 -1644 1146 225 106 26 chr5 44474606 44475250 -155154900 + Charlie2b DNA MER1_type 2080 2774 -8 289 279 51 46 chr5 44476148 44476300 -155153850 + LTR16A1 LTR ERVL 328 456 -1 259 372 54 27 chr5 44477035 44477293 -155152857 + HERV16 LTR ERVL 711 975 -4021 716 40 0 40 chr5 44477485 44477585 -155152565 + L1PA10 LINE L1 6069 6164 -4 2393 316 58 37 chr5 44478004 44479259 -155150891 + HERV16 LTR ERVL 3523 4804 -960 301 176 0 0 chr5 44479814 44479865 -155150285 - L1MC4 LINE L1 -1337 6705 6655 303 194 60 0 chr5 44479866 44479933 -155150217 - L1ME3 LINE L1 -11 6151 6081 426 352 87 5 chr5 44480050 44480269 -155149881 + L2 LINE L2 2570 2806 -508 248 360 118 55 chr5 44480285 44480574 -155149576 + L2 LINE L2 2966 3272 0 875 163 0 0 chr5 44480644 44480785 -155149365 + AluJb SINE Alu 1 141 -171 214 83 0 42 chr5 44480802 44480850 -155149300 + (TAAAAA)n Simple_repeat Simple_repeat 3 48 0 421 238 54 27 chr5 44482551 44482698 -155147452 - MIR SINE MIR -66 196 46 483 292 35 12 chr5 44482729 44482900 -155147250 + MER5B DNA MER1_type 4 178 0 391 294 199 15 chr5 44483328 44483655 -155146495 - L2 LINE L2 -1042 2272 1886 9816 169 48 53 chr5 44483971 44487678 -155142472 + L1MA3 LINE L1 3500 5731 -574 225 267 0 17 chr5 44487678 44487738 -155142412 + MLT1F1 LTR MaLR 49 107 -460 9816 169 48 53 chr5 44487738 44488311 -155141839 + L1MA3 LINE L1 5731 6305 0 851 202 125 77 chr5 44489168 44489569 -155140581 + Charlie4a DNA MER1_type 83 502 -6 2312 80 0 3 chr5 44491398 44491699 -155138451 + AluY SINE Alu 1 300 -11 429 109 0 0 chr5 44491897 44491961 -155138189 + MSTA LTR MaLR 365 428 0 763 308 89 21 chr5 44492010 44492736 -155137414 - L2 LINE L2 -13 3300 2515 1856 111 63 0 chr5 44493214 44493494 -155136656 - AluSc SINE Alu 0 309 14 207 276 153 55 chr5 44493621 44493784 -155136366 + MER5A DNA MER1_type 7 185 -4 1189 183 139 33 chr5 44493884 44494157 -155135993 - AluJb SINE Alu 0 302 1 541 283 13 0 chr5 44494390 44494542 -155135608 + L1ME3A LINE L1 6007 6160 -10 579 246 52 72 chr5 44494618 44494913 -155135237 + L1ME LINE L1 5480 5788 -378 26 50 0 0 chr5 44495067 44495107 -155135043 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 44495119 44495142 -155135008 + AT_rich Low_complexity Low_complexity 1 23 0 227 184 0 0 chr5 44495209 44495247 -155134903 + U6 snRNA snRNA 2 39 -68 3182 61 2 9 chr5 44495287 44495711 -155134439 + L1PA8 LINE L1 5749 6169 -3 6888 25 0 0 chr5 44495725 44496539 -155133611 - L1PA3 LINE L1 -1066 5080 4267 7638 31 0 0 chr5 44496539 44497610 -155132540 + L1PA3 LINE L1 5085 6155 0 531 251 151 22 chr5 44497890 44498069 -155132081 - MIR SINE MIR -1 261 60 1981 126 27 10 chr5 44498130 44498423 -155131727 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr5 44498516 44498537 -155131613 + AT_rich Low_complexity Low_complexity 1 21 0 248 217 63 147 chr5 44498944 44499087 -155131063 - MIR3 SINE MIR -49 159 29 1774 147 0 39 chr5 44499527 44499836 -155130314 - AluJo SINE Alu 0 306 9 366 200 9 19 chr5 44500470 44500575 -155129575 + CT-rich Low_complexity Low_complexity 3 106 0 776 156 35 0 chr5 44501191 44501332 -155128818 + L1PA14 LINE L1 6015 6160 -1 5411 57 0 0 chr5 44702191 44702892 -154927258 + L1PA5 LINE L1 5446 6146 -8 3240 202 35 46 chr5 44702909 44703901 -154926249 + L1ME1 LINE L1 5189 6165 -1 22 56 0 0 chr5 44706408 44706444 -154923706 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 44706829 44706850 -154923300 + AT_rich Low_complexity Low_complexity 1 21 0 919 223 57 40 chr5 44708696 44708749 -154921401 - MIR SINE MIR -10 252 201 2457 86 0 0 chr5 44708749 44709050 -154921100 + AluSq SINE Alu 1 301 -12 919 223 57 40 chr5 44709050 44709243 -154920907 - MIR SINE MIR -61 201 2 940 216 19 10 chr5 44709280 44709488 -154920662 - MER20 DNA MER1_type -9 210 1 2274 85 10 3 chr5 44709584 44709877 -154920273 + AluSq SINE Alu 1 295 -18 1636 148 63 25 chr5 44709947 44710231 -154919919 + AluSx SINE Alu 11 305 -7 2077 113 10 3 chr5 44710262 44710554 -154919596 + AluSg SINE Alu 1 294 -16 1124 142 11 11 chr5 44710554 44710730 -154919420 + AluSg/x SINE Alu 134 309 -3 4157 177 42 17 chr5 44710894 44712256 -154917894 - L1MB8 LINE L1 -37 6141 4747 1622 264 25 29 chr5 44712393 44713098 -154917052 + L1M3d LINE L1 1 511 -5380 * 2865 163 69 23 chr5 44713087 44713469 -154916681 + L1MB1 LINE L1 4674 5037 -1158 235 0 28 28 chr5 44713469 44713505 -154916645 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 2865 163 69 23 chr5 44713505 44713881 -154916269 + L1MB1 LINE L1 5037 5452 -743 906 75 8 0 chr5 44713885 44714005 -154916145 + AluSg/x SINE Alu 162 282 -28 6871 49 19 162 chr5 44714005 44715251 -154914899 + SVA Other Other 316 1383 -3 21 0 0 0 chr5 44715304 44715325 -154914825 + AT_rich Low_complexity Low_complexity 1 21 0 2560 160 46 14 chr5 44715325 44715379 -154914771 + L1MB1 LINE L1 5439 5490 -678 2268 110 0 0 chr5 44715379 44715680 -154914470 + AluSx SINE Alu 1 301 -11 2560 160 46 14 chr5 44715680 44716144 -154914006 + L1MB1 LINE L1 5490 5974 -194 2157 123 0 0 chr5 44716145 44716455 -154913695 + AluSg SINE Alu 1 310 0 2160 112 20 3 chr5 44716645 44716939 -154913211 - AluSx SINE Alu -13 299 1 768 189 8 0 chr5 44716946 44717078 -154913072 - FLAM_C SINE Alu 0 133 1 2591 43 3 0 chr5 44717576 44717876 -154912274 - AluY SINE Alu -10 301 1 309 167 24 12 chr5 44717935 44718019 -154912131 + (TA)n Simple_repeat Simple_repeat 2 86 0 31 0 0 0 chr5 44718439 44718470 -154911680 + AT_rich Low_complexity Low_complexity 1 31 0 2169 123 7 7 chr5 44719790 44720098 -154910052 + AluSx SINE Alu 1 308 -4 302 24 48 0 chr5 44720766 44720808 -154909342 + (TTAGGG)n Simple_repeat Simple_repeat 4 47 0 2002 127 0 3 chr5 44721479 44721796 -154908354 - AluSx SINE Alu 0 316 1 1149 80 53 84 chr5 44722207 44722432 -154907718 - L1MB3 LINE L1 -3 6180 5963 26 64 0 0 chr5 44722693 44722740 -154907410 + AT_rich Low_complexity Low_complexity 1 47 0 2035 124 50 16 chr5 44723180 44723543 -154906607 - THE1C LTR MaLR 0 375 1 1614 154 59 26 chr5 44723841 44724114 -154906036 - AluJo SINE Alu -30 282 1 2138 88 10 30 chr5 44724409 44724705 -154905445 - AluSx SINE Alu -22 290 1 745 192 19 13 chr5 44725100 44725256 -154904894 - MER58A DNA MER1_type -22 202 46 286 270 111 9 chr5 44725397 44725538 -154904612 + MER20B DNA MER1_type 56 213 -6 205 250 0 0 chr5 44725684 44725728 -154904422 + (CA)n Simple_repeat Simple_repeat 1 44 0 597 338 125 36 chr5 44726485 44727274 -154902876 - L2 LINE L2 -2 3311 2456 1100 301 183 8 chr5 44727456 44728073 -154902077 - L2 LINE L2 -1208 2106 1382 648 251 137 23 chr5 44728466 44728685 -154901465 - MIR SINE MIR -11 251 8 1901 153 0 13 chr5 44728809 44729109 -154901041 + AluSx SINE Alu 1 296 -16 2885 236 38 23 chr5 44729375 44729925 -154900225 - L1ME1 LINE L1 -5 6230 5654 2121 101 0 11 chr5 44729925 44730394 -154899756 + AluSx SINE Alu 1 466 0 2885 236 38 23 chr5 44730394 44730828 -154899322 - L1ME1 LINE L1 -581 5654 5228 1142 244 30 33 chr5 44730835 44731174 -154898976 - L1ME1 LINE L1 -1290 4925 4586 2547 135 61 10 chr5 44731174 44731581 -154898569 + MSTA LTR MaLR 1 428 0 1142 244 30 33 chr5 44731581 44731732 -154898418 - L1ME1 LINE L1 -1629 4586 4436 938 269 72 28 chr5 44731832 44732263 -154897887 - L1ME1 LINE L1 -4402 1994 1545 493 331 70 21 chr5 44732279 44732663 -154897487 + LTR16B LTR ERVL 62 464 0 1598 281 75 38 chr5 44732664 44733485 -154896665 - L1ME1 LINE L1 -5319 1077 215 2137 128 0 3 chr5 44733485 44733789 -154896361 + AluSx SINE Alu 1 303 -9 1598 281 75 38 chr5 44733789 44733918 -154896232 - L1ME1 LINE L1 -6181 215 92 182 36 0 36 chr5 44734095 44734123 -154896027 + (TAA)n Simple_repeat Simple_repeat 3 29 0 700 317 75 0 chr5 44734123 44734350 -154895800 - MIR SINE MIR -14 248 5 596 316 85 54 chr5 44734720 44735144 -154895006 - L2 LINE L2 -13 3300 2864 2112 128 0 3 chr5 44735270 44735559 -154894591 + AluSx SINE Alu 2 289 -23 21 0 0 0 chr5 44736266 44736287 -154893863 + AT_rich Low_complexity Low_complexity 1 21 0 563 247 123 34 chr5 44736723 44737196 -154892954 + L1MC4 LINE L1 7276 7914 -128 206 216 0 0 chr5 44737198 44737235 -154892915 + (TG)n Simple_repeat Simple_repeat 2 38 0 687 266 6 12 chr5 44737304 44737477 -154892673 - AluJb SINE Alu -12 300 129 195 42 0 0 chr5 44737510 44737534 -154892616 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 842 211 0 0 chr5 44737534 44737695 -154892455 - AluJo SINE Alu -32 280 120 408 321 24 0 chr5 44737760 44737928 -154892222 - L1 LINE L1 -1093 5053 4882 268 274 0 0 chr5 44737970 44738032 -154892118 + A-rich Low_complexity Low_complexity 1 62 0 2259 88 7 3 chr5 44738842 44739137 -154891013 - AluSp SINE Alu -17 296 1 1744 214 62 71 chr5 44739150 44739610 -154890540 + L1MC5 LINE L1 7116 7578 -383 2189 115 0 3 chr5 44739610 44739906 -154890244 - AluSq SINE Alu -18 295 1 1744 214 62 71 chr5 44739906 44739978 -154890172 + L1MC5 LINE L1 7578 7649 -312 2045 135 7 0 chr5 44739978 44740274 -154889876 - AluSx SINE Alu -13 299 2 1744 214 62 71 chr5 44740274 44740557 -154889593 + L1MC5 LINE L1 7649 7925 -36 1865 108 126 0 chr5 44740632 44740901 -154889249 + AluSx SINE Alu 1 303 -9 200 186 0 51 chr5 44741214 44741273 -154888877 + A-rich Low_complexity Low_complexity 3 58 0 14129 125 26 17 chr5 44741409 44741588 -154888562 - Tigger1 DNA MER2_type 0 2418 2242 2426 92 0 0 chr5 44741588 44741883 -154888267 + AluSg SINE Alu 2 296 -14 14129 125 26 17 chr5 44741883 44742067 -154888083 - Tigger1 DNA MER2_type -176 2242 2061 1506 183 48 35 chr5 44742067 44742356 -154887794 + AluJb SINE Alu 1 293 -19 14129 125 26 17 chr5 44742356 44743456 -154886694 - Tigger1 DNA MER2_type -357 2061 920 2433 85 0 3 chr5 44743456 44743763 -154886387 + AluSc SINE Alu 1 306 -3 14129 125 26 17 chr5 44743763 44744682 -154885468 - Tigger1 DNA MER2_type -1498 920 11 2324 106 3 3 chr5 44744862 44745174 -154884976 + AluSx SINE Alu 1 312 0 225 352 64 54 chr5 44746022 44746414 -154883736 - L2 LINE L2 -1738 1576 1181 737 198 71 61 chr5 44748300 44748512 -154881638 - MER20 DNA MER1_type -5 214 1 1912 200 86 103 chr5 44748530 44748738 -154881412 + Charlie1a DNA MER1_type 31 241 -2520 1836 121 89 0 chr5 44748738 44749020 -154881130 + AluJb SINE Alu 1 307 -5 1912 200 86 103 chr5 44749020 44749627 -154880523 + Charlie1a DNA MER1_type 241 832 -623 502 260 80 7 chr5 44749628 44749778 -154880372 + MLT1F LTR MaLR 1 161 -381 245 236 65 106 chr5 44749778 44749901 -154880249 + L1ME3A LINE L1 6029 6146 -24 2122 105 6 25 chr5 44750750 44751065 -154879085 - AluSq SINE Alu -4 309 1 302 297 135 11 chr5 44752943 44753209 -154876941 + L1MC4 LINE L1 7620 7918 -124 201 273 0 0 chr5 44753216 44753271 -154876879 + (TA)n Simple_repeat Simple_repeat 2 56 0 2096 104 10 3 chr5 44753768 44754057 -154876093 + AluSg SINE Alu 1 291 -19 559 280 90 5 chr5 44755127 44755316 -154874834 - MIR3 SINE MIR -1 207 3 781 146 0 24 chr5 44755728 44755851 -154874299 - FLAM_C SINE Alu -20 123 4 709 312 52 12 chr5 44757392 44757642 -154872508 - MIR SINE MIR 0 262 3 303 241 71 7 chr5 44757718 44757859 -154872291 + L1ME4a LINE L1 5971 6120 -1 225 155 84 28 chr5 44758286 44758357 -154871793 + MER116 DNA Mariner 1 75 -5 1560 162 9 70 chr5 44758493 44758821 -154871329 + AluJo SINE Alu 2 309 -3 732 157 0 0 chr5 44758834 44758942 -154871208 - FLAM_C SINE Alu -30 113 6 343 282 106 47 chr5 44758956 44759211 -154870939 - L1ME4a LINE L1 -1 6120 5851 35 54 0 0 chr5 44760261 44760317 -154869833 + AT_rich Low_complexity Low_complexity 1 56 0 180 0 0 0 chr5 44761654 44761674 -154868476 + (A)n Simple_repeat Simple_repeat 1 20 0 1852 164 0 16 chr5 44761947 44762258 -154867892 + AluSx SINE Alu 1 306 -6 2114 108 27 0 chr5 44762366 44762663 -154867487 - AluSx SINE Alu -7 305 1 67 42 0 0 chr5 44762702 44762797 -154867353 + AT_rich Low_complexity Low_complexity 1 95 0 22 35 0 0 chr5 44762965 44762994 -154867156 + AT_rich Low_complexity Low_complexity 1 29 0 1721 168 14 0 chr5 44762995 44763280 -154866870 + AluJo SINE Alu 1 289 -23 389 263 215 19 chr5 44763980 44764189 -154865961 - L2 LINE L2 -1 3312 3063 1643 183 7 3 chr5 44764419 44764704 -154865446 - AluJb SINE Alu -26 286 1 307 276 130 48 chr5 44765229 44765584 -154864566 + HAL1 LINE L1 2 385 -2122 684 286 136 40 chr5 44765626 44766279 -154863871 + HAL1 LINE L1 480 1195 -1312 198 0 0 0 chr5 44766322 44766344 -154863806 + (T)n Simple_repeat Simple_repeat 1 22 0 193 304 29 0 chr5 44766614 44766683 -154863467 + MIR3 SINE MIR 123 193 -15 406 307 62 34 chr5 44766878 44767054 -154863096 + MIR3 SINE MIR 22 202 -6 1739 288 131 4 chr5 44767318 44768295 -154861855 - L2 LINE L2 0 3313 2202 2400 87 0 0 chr5 44768789 44769087 -154861063 - AluSq SINE Alu -15 298 1 1977 118 7 36 chr5 44769426 44769565 -154860585 + AluSx SINE Alu 1 143 -169 2320 91 0 3 chr5 44769565 44769872 -154860278 + AluSq SINE Alu 1 306 -7 1977 118 7 36 chr5 44769872 44770036 -154860114 + AluSx SINE Alu 143 295 -17 332 248 39 31 chr5 44770309 44770438 -154859712 - L1ME1 LINE L1 -22 6144 6015 1824 159 0 43 chr5 44770547 44770873 -154859277 - AluJb SINE Alu 0 312 1 11402 127 32 31 chr5 44770979 44773062 -154857088 - Ricksha_c DNA DNA -13 2033 8 1039 247 157 22 chr5 44773088 44773590 -154856560 + HAL1 LINE L1 1648 2217 -290 221 266 89 13 chr5 44774114 44774193 -154855957 - L2 LINE L2 0 3272 3188 2284 82 3 10 chr5 44775253 44775546 -154854604 + AluSg SINE Alu 1 291 -19 525 288 45 49 chr5 44775665 44775908 -154854242 + MIR SINE MIR 21 262 0 581 206 71 8 chr5 44776529 44776655 -154853495 - MIR SINE MIR -109 153 20 327 73 0 55 chr5 44776855 44776910 -154853240 - L2 LINE L2 0 3313 3262 2203 80 0 11 chr5 44777001 44777319 -154852831 - AluSq SINE Alu 0 315 1 1323 221 47 55 chr5 44777431 44777617 -154852533 + MLT1C LTR MaLR 11 197 -270 342 0 0 0 chr5 44777617 44777655 -154852495 + (GA)n Simple_repeat Simple_repeat 2 39 0 1323 221 47 55 chr5 44777655 44777748 -154852402 + MLT1C LTR MaLR 197 289 -178 2359 94 0 0 chr5 44777748 44778045 -154852105 + AluSx SINE Alu 1 297 -15 1323 221 47 55 chr5 44778045 44778216 -154851934 + MLT1C LTR MaLR 289 458 -9 925 156 7 7 chr5 44778233 44778433 -154851717 + L1MDb LINE L1 1141 1634 -4693 1819 159 3 52 chr5 44778433 44778760 -154851390 + AluSx SINE Alu 1 311 -1 1287 241 48 22 chr5 44778760 44778957 -154851193 + L1MA6 LINE L1 2983 3173 -4392 2259 81 3 0 chr5 44778957 44779270 -154850880 + AluSp SINE Alu 1 314 0 1287 241 48 22 chr5 44779270 44779849 -154850301 + L1MA6 LINE L1 3173 3785 -3780 2597 173 23 19 chr5 44779849 44780341 -154849809 + L1MA6 LINE L1 6114 6610 -955 1999 118 10 0 chr5 44780341 44780629 -154849521 + AluSg SINE Alu 19 309 -1 2597 173 23 19 chr5 44780629 44780702 -154849448 + L1MA6 LINE L1 6610 6681 -884 2177 139 0 0 chr5 44780702 44781011 -154849139 + AluJb SINE Alu 1 309 -3 1761 141 32 0 chr5 44781011 44781324 -154848826 + L1MA6 LINE L1 6784 7106 -604 1766 165 46 14 chr5 44781327 44781697 -154848453 + L1MA6 LINE L1 7335 7716 -3 2381 83 0 3 chr5 44782296 44782618 -154847532 - AluSc SINE Alu 0 309 1 336 284 193 0 chr5 44782674 44782834 -154847316 - MIR3 SINE MIR -65 197 3 307 252 41 81 chr5 44783546 44783669 -154846481 - L1ME3A LINE L1 -88 6082 5965 487 264 174 35 chr5 44783954 44784321 -154845829 - L1MC4a LINE L1 -1867 5941 5524 260 356 0 0 chr5 44784318 44784450 -154845700 - L1ME3A LINE L1 -217 5953 5822 * 2362 101 0 16 chr5 44784560 44784876 -154845274 + AluSq SINE Alu 1 311 -2 2213 93 7 3 chr5 44785608 44785897 -154844253 + AluSq SINE Alu 9 298 -15 2139 152 13 9 chr5 44785897 44786526 -154843624 - L1PB1 LINE L1 -624 5527 4898 3843 107 40 16 chr5 44786526 44786781 -154843369 + L1PB1 LINE L1 5512 5759 -392 468 51 0 0 chr5 44786781 44786840 -154843310 + (CA)n Simple_repeat Simple_repeat 2 60 0 3843 107 40 16 chr5 44786840 44787206 -154842944 + L1PB1 LINE L1 5759 6150 -1 231 214 0 0 chr5 44787474 44787516 -154842634 + MLT1L LTR MaLR 569 610 -5 2268 109 3 6 chr5 44787839 44788152 -154841998 + AluSx SINE Alu 1 312 0 839 108 0 0 chr5 44788899 44789019 -154841131 - L1PB3 LINE L1 -2 6152 6033 180 0 0 0 chr5 44789665 44789685 -154840465 + (CCCCCA)n Simple_repeat Simple_repeat 4 23 0 230 214 43 0 chr5 44790004 44790074 -154840076 + G-rich Low_complexity Low_complexity 4 76 0 225 283 17 0 chr5 44792013 44792073 -154838077 - L3 LINE CR1 -2 1575 1515 6546 71 20 36 chr5 44792192 44793371 -154836779 + SVA Other Other 432 1383 -3 27 0 0 0 chr5 44793371 44793398 -154836752 + AT_rich Low_complexity Low_complexity 1 27 0 1550 192 3 20 chr5 44793837 44794134 -154836016 - AluJo SINE Alu -20 292 1 2208 131 3 0 chr5 44794180 44794485 -154835665 + AluSp SINE Alu 1 306 -7 277 213 16 0 chr5 44794778 44794839 -154835311 - L3 LINE CR1 -561 1016 955 203 338 62 0 chr5 44794857 44794937 -154835213 - L2 LINE L2 -20 3293 3209 1141 202 0 31 chr5 44794979 44795207 -154834943 + AluJo SINE Alu 84 304 -8 2052 146 3 3 chr5 44795345 44795653 -154834497 + AluJb SINE Alu 3 310 -2 2160 112 7 3 chr5 44795653 44795948 -154834202 + AluSx SINE Alu 1 296 -16 2274 90 7 0 chr5 44796039 44796338 -154833812 + AluSx SINE Alu 1 301 -11 2303 100 0 0 chr5 44796916 44797216 -154832934 - AluY SINE Alu -11 300 1 2338 88 0 7 chr5 44797316 44797623 -154832527 + AluSc SINE Alu 1 305 -4 1123 133 0 0 chr5 44797717 44797905 -154832245 + L1MA4A LINE L1 6109 6296 -7 21 0 0 0 chr5 44797908 44797929 -154832221 + AT_rich Low_complexity Low_complexity 1 21 0 1544 179 18 7 chr5 44798218 44798497 -154831653 - AluJb SINE Alu -30 282 1 2189 102 0 3 chr5 44798586 44798880 -154831270 - AluSg SINE Alu -6 304 12 2065 95 27 20 chr5 44799408 44799702 -154830448 + AluY SINE Alu 1 296 -15 1977 150 3 0 chr5 44800293 44800599 -154829551 - AluSx SINE Alu -5 307 1 1149 163 24 20 chr5 44800610 44800862 -154829288 - L1MC3 LINE L1 0 7785 7533 285 51 0 0 chr5 44800862 44800901 -154829249 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1967 108 4 11 chr5 44800909 44801186 -154828964 - AluSg SINE Alu -35 275 1 1255 193 84 36 chr5 44801202 44801534 -154828616 + MLT1A1 LTR MaLR 1 348 -17 3417 196 31 29 chr5 44801608 44802338 -154827812 - MER21B LTR ERV1 -113 750 19 331 321 15 22 chr5 44802357 44802491 -154827659 - L1MC4 LINE L1 -1296 6746 6614 2404 66 3 0 chr5 44802496 44802784 -154827366 - AluSp SINE Alu -24 289 1 5097 142 33 95 chr5 44802836 44803764 -154826386 - L1MC3 LINE L1 -265 7520 6536 2252 141 28 17 chr5 44803764 44804125 -154826025 - MLT1A1 LTR MaLR 0 365 1 5097 142 33 95 chr5 44804125 44804516 -154825634 - L1MC3 LINE L1 -1249 6536 6122 1968 146 0 13 chr5 44804516 44804831 -154825319 - AluJb SINE Alu -1 311 1 2430 78 3 7 chr5 44804840 44805146 -154825004 - AluSp SINE Alu -8 305 1 5097 142 33 95 chr5 44805146 44805254 -154824896 - L1MC3 LINE L1 -1671 6114 6001 2788 163 59 0 chr5 44805254 44805744 -154824406 - LTR53 LTR ERVL 0 519 1 5097 142 33 95 chr5 44805744 44805774 -154824376 - L1MC3 LINE L1 -1784 6001 5971 1909 171 0 3 chr5 44805774 44806073 -154824077 - AluJb SINE Alu -14 298 1 5097 142 33 95 chr5 44806073 44806372 -154823778 - L1MC3 LINE L1 -1814 5971 5840 2243 106 0 7 chr5 44806540 44806833 -154823317 - AluSc SINE Alu -18 291 1 1836 193 37 3 chr5 44806980 44807333 -154822817 + MLT1A1 LTR MaLR 1 365 0 1597 224 47 62 chr5 44807633 44808186 -154821964 - HAL1 LINE L1 -440 2067 1523 309 156 177 0 chr5 44808198 44808295 -154821855 - L1ME1 LINE L1 0 6184 6072 255 170 0 0 chr5 44808298 44808345 -154821805 + (TA)n Simple_repeat Simple_repeat 2 48 0 844 150 23 0 chr5 44808350 44808483 -154821667 - AluJb SINE Alu -176 136 1 357 222 0 127 chr5 44808484 44808526 -154821624 - L1ME1 LINE L1 -48 6118 6072 2320 100 10 0 chr5 44808526 44808835 -154821315 + AluSp SINE Alu 1 312 -1 357 222 0 127 chr5 44808835 44808918 -154821232 - L1ME1 LINE L1 -94 6072 6009 334 158 0 0 chr5 44808914 44808971 -154821179 - L1MD3 LINE L1 -2028 5967 5911 * 553 186 0 0 chr5 44808972 44809058 -154821092 + AluSx SINE Alu 2 87 -226 2176 112 7 0 chr5 44809058 44809352 -154820798 + AluSx SINE Alu 1 296 -16 1666 113 0 21 chr5 44809353 44809592 -154820558 + AluSx SINE Alu 76 309 -3 2299 173 77 62 chr5 44809599 44809928 -154820222 - L1ME1 LINE L1 -258 5908 5565 2898 95 28 5 chr5 44809928 44810361 -154819789 - L1PB2 LINE L1 -1 6150 5708 2299 173 77 62 chr5 44810361 44810614 -154819536 - L1ME1 LINE L1 -601 5565 5317 2448 62 0 33 chr5 44810629 44810935 -154819215 + AluY SINE Alu 1 296 -15 584 126 136 0 chr5 44810937 44811040 -154819110 - AluSc SINE Alu 0 309 193 786 186 122 30 chr5 44811067 44811304 -154818846 - L1ME1 LINE L1 -904 5242 4984 26 0 0 0 chr5 44811328 44811354 -154818796 + AT_rich Low_complexity Low_complexity 1 26 0 1085 178 38 2 chr5 44811420 44811642 -154818508 - L1ME1 LINE L1 -1181 4965 4740 180 0 0 0 chr5 44811655 44811675 -154818475 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2425 81 19 3 chr5 44811778 44812085 -154818065 - AluSq SINE Alu -1 312 1 1758 104 65 11 chr5 44812091 44812351 -154817799 - AluSq SINE Alu -39 274 1 1921 171 13 0 chr5 44812386 44812690 -154817460 - AluJb SINE Alu 0 312 5 373 115 0 0 chr5 44813208 44813260 -154816890 - MLT1A1 LTR MaLR -2 363 312 2236 169 61 2 chr5 44813262 44813658 -154816492 - MSTB LTR MaLR -4 422 4 794 175 31 135 chr5 44813679 44814058 -154816092 - MLT1A1 LTR MaLR -38 358 21 1030 202 112 25 chr5 44814061 44814154 -154815996 + MSTD LTR MaLR 2 85 -311 2026 139 3 3 chr5 44814154 44814456 -154815694 + AluSx SINE Alu 1 302 -10 1030 202 112 25 chr5 44814456 44814690 -154815460 + MSTD LTR MaLR 85 396 0 2407 85 3 7 chr5 44814746 44815052 -154815098 + AluSp SINE Alu 1 305 -8 675 239 100 17 chr5 44815295 44815525 -154814625 + LTR41 LTR ERVL 521 769 -4 2062 128 0 3 chr5 44815674 44815964 -154814186 - AluSx SINE Alu -23 289 1 2150 96 7 7 chr5 44816382 44816664 -154813486 - AluSg SINE Alu -28 282 1 1983 129 14 10 chr5 44817276 44817571 -154812579 - AluSx SINE Alu -16 296 1 27 29 0 0 chr5 44817895 44817929 -154812221 + AT_rich Low_complexity Low_complexity 1 34 0 1702 154 28 18 chr5 44818352 44818637 -154811513 - AluJb SINE Alu -23 289 2 906 159 92 0 chr5 44819292 44819455 -154810695 - AluSg/x SINE Alu -17 293 116 326 280 28 9 chr5 44819915 44820022 -154810128 + L2 LINE L2 3204 3312 -1 239 240 115 31 chr5 44820356 44820452 -154809698 + L2 LINE L2 3209 3312 -1 1770 89 0 13 chr5 44821299 44821534 -154808616 - AluSp SINE Alu -81 232 1 719 175 0 0 chr5 44821864 44821978 -154808172 + AluJb SINE Alu 5 118 -194 2181 120 3 0 chr5 44822036 44822328 -154807822 - AluSc SINE Alu -16 293 1 1232 124 10 161 chr5 44822499 44822790 -154807360 + AluYb8 SINE Alu 1 247 -71 501 178 22 0 chr5 44824785 44824875 -154805275 + MER20 DNA MER1_type 107 198 -21 1220 174 12 21 chr5 44825363 44825605 -154804545 + AluJb SINE Alu 64 303 -9 192 158 0 0 chr5 44827020 44827058 -154803092 + (CTG)n Simple_repeat Simple_repeat 1 38 0 1813 144 3 19 chr5 44827470 44827783 -154802367 + AluJb SINE Alu 1 308 -4 531 215 69 24 chr5 44827783 44827905 -154802245 - MLT1D LTR MaLR -129 376 266 1681 154 55 33 chr5 44827905 44828235 -154801915 - MER44D DNA MER2_type -2 607 1 531 215 69 24 chr5 44828235 44828261 -154801889 - MLT1D LTR MaLR -239 266 243 416 204 97 0 chr5 44828300 44828393 -154801757 - AluSg SINE Alu -181 129 28 520 218 58 78 chr5 44828394 44828600 -154801550 - MLT1D LTR MaLR -302 203 2 2169 102 3 16 chr5 44828912 44829217 -154800933 - AluSx SINE Alu -11 301 1 440 66 79 0 chr5 44829471 44829547 -154800603 - Tigger7 DNA MER2_type -95 2392 2311 678 116 11 0 chr5 44829548 44829643 -154800507 + AluS SINE Alu 2 97 -216 2441 72 3 0 chr5 44829867 44830160 -154799990 - AluSp SINE Alu -19 294 1 811 129 73 0 chr5 44830184 44830308 -154799842 + AluJo/FLAM SINE Alu 1 133 -179 1737 174 3 14 chr5 44830311 44830604 -154799546 + AluJo SINE Alu 13 302 -10 446 149 107 38 chr5 44830905 44831120 -154799030 + L1MA7 LINE L1 5961 6291 0 1433 159 17 21 chr5 44831212 44831445 -154798705 - AluJo SINE Alu -80 232 1 357 275 92 84 chr5 44831621 44831992 -154798158 - L1ME3A LINE L1 -233 5937 5693 26 74 0 0 chr5 44832004 44832058 -154798092 + AT_rich Low_complexity Low_complexity 1 54 0 685 254 115 72 chr5 44832067 44832167 -154797983 - L1MC4a LINE L1 -70 6051 5957 184 57 29 29 chr5 44832167 44832202 -154797948 + (CATATA)n Simple_repeat Simple_repeat 1 35 0 685 254 115 72 chr5 44832202 44832604 -154797546 - L1MC4a LINE L1 -164 5957 5527 196 241 38 51 chr5 44832608 44832687 -154797463 - L2 LINE L2 -186 3086 3009 2277 118 0 0 chr5 44834298 44834604 -154795546 + AluSq SINE Alu 1 306 -7 1791 154 39 0 chr5 44835794 44836073 -154794077 - AluJb SINE Alu -22 290 1 1971 143 84 84 chr5 44836269 44836408 -154793742 - MLT1C LTR MaLR 0 467 329 2190 114 10 0 chr5 44836408 44836707 -154793443 - AluSx SINE Alu -8 304 3 1971 143 84 84 chr5 44836707 44837030 -154793120 - MLT1C LTR MaLR -137 330 5 23 0 0 0 chr5 44837088 44837111 -154793039 + AT_rich Low_complexity Low_complexity 1 23 0 375 106 0 17 chr5 44837282 44837354 -154792796 - AluJb SINE Alu -188 114 65 265 223 128 21 chr5 44837356 44837450 -154792700 - MLT1I LTR MaLR -25 384 281 261 175 48 14 chr5 44837425 44837537 -154792613 - MLT1H LTR MaLR -104 445 256 * 2463 87 0 0 chr5 44837557 44837856 -154792294 - AluSx SINE Alu -13 299 1 576 200 111 93 chr5 44837919 44837988 -154792162 - MLT1H LTR MaLR -318 231 165 1682 191 90 40 chr5 44837988 44838433 -154791717 - MLT1C LTR MaLR 0 467 1 576 200 111 93 chr5 44838433 44838588 -154791562 - MLT1H LTR MaLR -384 165 3 1413 266 128 35 chr5 44838949 44839751 -154790399 - L1ME LINE L1 -4448 1632 715 1893 154 3 23 chr5 44839751 44840056 -154790094 - AluJb SINE Alu -13 299 1 1413 266 128 35 chr5 44840056 44840357 -154789793 - L1ME LINE L1 -5365 715 443 1956 108 63 28 chr5 44840551 44840837 -154789313 - AluSq SINE Alu -17 296 1 1761 165 7 20 chr5 44841234 44841531 -154788619 + AluJb SINE Alu 1 293 -19 2397 84 0 7 chr5 44841673 44841981 -154788169 + AluSc SINE Alu 1 306 -3 2149 96 16 32 chr5 44841981 44842294 -154787856 + AluSx SINE Alu 1 309 -3 24 32 0 0 chr5 44842326 44842357 -154787793 + AT_rich Low_complexity Low_complexity 1 31 0 414 283 50 30 chr5 44842394 44842592 -154787558 + L1MC4a LINE L1 5732 5933 -1875 2154 110 14 3 chr5 44842599 44842890 -154787260 + AluSx SINE Alu 1 294 -18 1797 135 23 0 chr5 44843088 44843348 -154786802 + AluSx SINE Alu 1 266 -46 1241 173 153 4 chr5 44843409 44843663 -154786487 + AluJo SINE Alu 1 292 -20 2263 108 3 0 chr5 44846139 44846436 -154783714 - AluSp SINE Alu -15 298 1 1739 123 54 90 chr5 44846932 44847094 -154783056 + THE1C LTR MaLR 1 167 -208 1944 165 7 0 chr5 44847094 44847391 -154782759 - AluSx SINE Alu -13 299 1 1739 123 54 90 chr5 44847391 44847575 -154782575 + THE1C LTR MaLR 167 334 -41 2256 97 0 17 chr5 44847575 44847875 -154782275 - AluSg SINE Alu -15 295 1 1739 123 54 90 chr5 44847875 44847916 -154782234 + THE1C LTR MaLR 334 375 0 6628 21 12 8 chr5 44848017 44848794 -154781356 - L1PA2 LINE L1 0 6155 5376 21 0 0 0 chr5 44848952 44848973 -154781177 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 44849125 44849146 -154781004 + AT_rich Low_complexity Low_complexity 1 21 0 2283 92 7 7 chr5 44849345 44849648 -154780502 - AluSx SINE Alu -9 303 1 656 267 61 0 chr5 44849853 44850018 -154780132 - LTR33 LTR ERVL -344 177 3 191 314 14 0 chr5 44850068 44850138 -154780012 - L2 LINE L2 -1 3312 3242 1600 160 80 3 chr5 44850259 44850547 -154779603 + AluJo SINE Alu 1 310 -2 2071 96 25 11 chr5 44850559 44850839 -154779311 - AluSx SINE Alu -15 297 14 2090 135 0 3 chr5 44851069 44851381 -154778769 + AluSx SINE Alu 1 311 -1 745 113 0 0 chr5 44851519 44851625 -154778525 - FLAM_C SINE Alu -36 107 2 21 57 0 0 chr5 44851680 44851715 -154778435 + AT_rich Low_complexity Low_complexity 1 35 0 421 273 68 74 chr5 44852136 44852529 -154777621 - MLT1J LTR MaLR -43 468 38 1705 180 0 4 chr5 44852583 44852881 -154777269 + AluJb SINE Alu 12 308 0 414 202 0 22 chr5 44853123 44853212 -154776938 + MER65A LTR ERV1 1 87 -358 2403 83 0 3 chr5 44853213 44853513 -154776637 + AluSx SINE Alu 1 299 -13 764 142 8 0 chr5 44853534 44853654 -154776496 + AluSq/x SINE Alu 4 124 -189 2092 151 60 5 chr5 44853655 44854025 -154776125 + MER65A LTR ERV1 56 445 0 2160 98 3 64 chr5 44854136 44854464 -154775686 - AluSg SINE Alu -2 308 1 1653 109 27 16 chr5 44854475 44854732 -154775418 - AluSx SINE Alu -3 309 50 2416 77 3 13 chr5 44854756 44855066 -154775084 - AluY SINE Alu -4 307 1 2154 116 3 7 chr5 44855116 44855417 -154774733 + AluSx SINE Alu 1 300 -12 404 268 31 16 chr5 44855424 44855551 -154774599 - MER5A DNA MER1_type 0 189 61 803 142 24 8 chr5 44855570 44855697 -154774453 - AluJo SINE Alu -177 135 7 4608 92 58 59 chr5 44855926 44856979 -154773171 + MER11A LTR ERVK 1 1266 0 2131 112 7 3 chr5 44857396 44857682 -154772468 + AluSx SINE Alu 1 287 -25 975 299 70 19 chr5 44858396 44858808 -154771342 + LTR16B LTR ERVL 32 464 0 756 205 141 91 chr5 44858993 44859256 -154770894 - LTR1B LTR ERV1 -237 589 314 3874 95 40 0 chr5 44859461 44859989 -154770161 + MER41A LTR ERV1 6 554 0 293 234 37 37 chr5 44859990 44860097 -154770053 - LTR1B LTR ERV1 -681 145 39 1891 148 3 3 chr5 44860159 44860466 -154769684 - AluSx SINE Alu 0 307 1 360 200 120 0 chr5 44860588 44860663 -154769487 + LTR8 LTR ERV1 1 84 -607 2013 140 13 10 chr5 44860671 44860978 -154769172 - AluSx SINE Alu -4 308 1 295 222 242 33 chr5 44861046 44861199 -154768951 - MER5A DNA MER1_type -1 188 4 670 233 23 17 chr5 44861210 44861386 -154768764 - MER5B DNA MER1_type 0 178 2 2307 110 3 0 chr5 44861391 44861691 -154768459 + AluSx SINE Alu 1 301 -11 295 250 10 30 chr5 44861778 44861878 -154768272 + GA-rich Low_complexity Low_complexity 2 99 0 4182 155 11 16 chr5 44862299 44863001 -154767149 - LTR34 LTR ERV1 0 699 1 767 215 98 107 chr5 44863009 44863181 -154766969 - LTR8A LTR ERV1 -4 723 551 1862 159 0 13 chr5 44863181 44863483 -154766667 - AluJb SINE Alu -13 299 2 767 215 98 107 chr5 44863483 44863751 -154766399 - LTR8A LTR ERV1 -176 551 287 346 135 0 0 chr5 44863798 44863850 -154766300 + AluSx SINE Alu 1 52 -248 2717 140 46 64 chr5 44863850 44864349 -154765801 + LTR2B LTR ERV1 1 490 0 1730 119 4 0 chr5 44864349 44864593 -154765557 + AluSx SINE Alu 49 293 -19 1889 165 23 0 chr5 44864779 44865082 -154765068 + AluSx SINE Alu 1 310 -2 641 311 106 49 chr5 44865546 44866093 -154764057 + L2 LINE L2 2117 2694 -620 991 183 12 0 chr5 44866140 44866304 -154763846 + FRAM SINE Alu 1 158 -18 2403 101 0 0 chr5 44866308 44866640 -154763510 + AluSc SINE Alu 1 332 0 310 282 50 54 chr5 44866687 44866946 -154763204 - L1MC5 LINE L1 -64 7897 7640 624 277 25 9 chr5 44867065 44867294 -154762856 - L1MC5 LINE L1 -398 7410 7269 1794 163 7 3 chr5 44867454 44867774 -154762376 + AluJb SINE Alu 1 321 0 2182 103 4 0 chr5 44867948 44868229 -154761921 + AluSq SINE Alu 2 283 -30 1966 121 4 4 chr5 44868229 44868509 -154761641 + AluSg SINE Alu 24 303 -7 24 0 0 0 chr5 44868518 44868542 -154761608 + AT_rich Low_complexity Low_complexity 1 24 0 403 194 0 0 chr5 44868953 44869020 -154761130 + MER5A DNA MER1_type 9 75 -114 2032 154 118 90 chr5 44869032 44869565 -154760585 - LTR10A LTR ERV1 -61 548 1 2167 105 3 3 chr5 44869733 44870038 -154760112 - AluY SINE Alu -6 305 1 2256 93 3 3 chr5 44870442 44870733 -154759417 + AluSx SINE Alu 1 291 -21 233 326 80 7 chr5 44870753 44870891 -154759259 - MIR SINE MIR -26 236 89 4734 54 2 24 chr5 44871420 44871478 -154758672 - LTR8 LTR ERV1 -108 583 525 2227 116 3 0 chr5 44871478 44871789 -154758361 - AluSx SINE Alu 0 312 1 4734 54 2 24 chr5 44871789 44872326 -154757824 - LTR8 LTR ERV1 -166 525 1 309 50 0 0 chr5 44872326 44872366 -154757784 - HUERS-P1 LTR ERV1 0 6263 6224 344 325 67 34 chr5 44872423 44872534 -154757616 + L1MC/D LINE L1 5492 5598 -574 2186 134 0 0 chr5 44872534 44872839 -154757311 + AluSx SINE Alu 1 305 -7 344 325 67 34 chr5 44872839 44873022 -154757128 + L1MC/D LINE L1 5598 5806 -366 2423 82 76 0 chr5 44873024 44873354 -154756796 + THE1A LTR MaLR 1 355 0 11699 98 10 1 chr5 44873354 44874920 -154755230 + THE1A-int LTR MaLR 1 1580 0 2291 98 76 0 chr5 44874920 44875248 -154754902 + THE1A LTR MaLR 1 353 -2 478 339 45 22 chr5 44875696 44875920 -154754230 - MIR SINE MIR 0 262 34 265 267 0 0 chr5 44875997 44876057 -154754093 + MIR SINE MIR 194 253 -9 2032 147 10 0 chr5 44876075 44876381 -154753769 - AluSx SINE Alu -3 309 1 476 248 0 0 chr5 44876511 44876616 -154753534 + L2 LINE L2 3195 3299 -14 1793 172 11 0 chr5 44876839 44877124 -154753026 + AluSx SINE Alu 1 288 -24 2249 109 3 3 chr5 44877152 44877454 -154752696 - AluSq SINE Alu -11 302 1 2391 101 0 0 chr5 44877465 44877772 -154752378 - AluSq SINE Alu -6 307 1 1774 159 13 22 chr5 44877776 44878091 -154752059 - AluJo SINE Alu 0 312 1 2378 168 21 14 chr5 44878411 44878833 -154751317 + MSTB LTR MaLR 1 425 -1 852 285 44 4 chr5 44879876 44880146 -154750004 - L2 LINE L2 -1727 1587 1307 1912 163 7 0 chr5 44880516 44880810 -154749340 - AluSx SINE Alu -16 296 1 607 262 226 0 chr5 44880953 44881228 -154748922 - L2 LINE L2 -1776 1538 1202 342 115 0 0 chr5 44881441 44881502 -154748648 + (TC)n Simple_repeat Simple_repeat 1 61 0 243 140 0 0 chr5 44881501 44881551 -154748599 + (CA)n Simple_repeat Simple_repeat 1 50 0 * 2294 102 10 0 chr5 44881607 44881910 -154748240 - AluSq SINE Alu -7 306 1 6182 217 32 33 chr5 44882027 44882490 -154747660 + L1M4 LINE L1 3577 4039 -2107 2483 55 3 0 chr5 44882490 44882779 -154747371 + AluY SINE Alu 5 294 -17 6182 217 32 33 chr5 44882779 44882905 -154747245 + L1M4 LINE L1 4039 4164 -1982 207 0 0 0 chr5 44882905 44882928 -154747222 + (GA)n Simple_repeat Simple_repeat 2 24 0 6182 217 32 33 chr5 44882928 44883118 -154747032 + L1M4 LINE L1 4164 4353 -1793 2177 125 0 0 chr5 44883118 44883414 -154746736 - AluSx SINE Alu -16 296 1 6182 217 32 33 chr5 44883414 44884283 -154745867 + L1M4 LINE L1 4353 5226 -920 648 234 0 28 chr5 44884283 44884424 -154745726 + Tigger1 DNA MER2_type 1 137 -2281 1941 158 0 0 chr5 44884461 44884745 -154745405 - AluSx SINE Alu -28 284 1 5302 187 61 5 chr5 44884745 44885904 -154744246 - L1M1 LINE L1 -4065 1263 223 6833 60 7 13 chr5 44886006 44886711 -154743439 - L1P LINE L1 -1212 4934 4226 333 0 0 0 chr5 44886711 44886748 -154743402 + (TA)n Simple_repeat Simple_repeat 2 38 0 838 31 0 0 chr5 44886750 44886847 -154743303 - L1PA5 LINE L1 -6 6148 6052 6833 60 7 13 chr5 44886847 44887035 -154743115 - L1P LINE L1 -1921 4225 4044 9013 81 12 1 chr5 44887036 44888265 -154741885 - L1M1 LINE L1 -3304 3024 1782 984 164 52 65 chr5 44888901 44889133 -154741017 - L1M1 LINE L1 -5090 238 10 1764 164 3 30 chr5 44889591 44889895 -154740255 - AluJo SINE Alu -9 303 8 9497 144 22 23 chr5 44889920 44891532 -154738618 + L1P LINE L1 3 1613 -4533 1352 166 0 23 chr5 44891637 44891854 -154738296 - AluSx SINE Alu -100 212 1 30 69 0 0 chr5 44891879 44891937 -154738213 + AT_rich Low_complexity Low_complexity 1 58 0 511 235 81 105 chr5 44891996 44892305 -154737845 - L1MC4a LINE L1 -1717 6091 5791 1738 167 20 10 chr5 44892305 44892598 -154737552 + AluSx SINE Alu 5 300 -12 511 235 81 105 chr5 44892598 44892658 -154737492 - L1MC4a LINE L1 -2017 5791 5731 2259 120 3 0 chr5 44892662 44892970 -154737180 - AluSx SINE Alu -3 309 1 216 0 0 0 chr5 44892976 44893000 -154737150 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1622 186 0 7 chr5 44893008 44893283 -154736867 - AluJo SINE Alu -39 273 1 376 296 41 29 chr5 44893304 44893476 -154736674 - MIR SINE MIR -1 261 88 1786 159 0 11 chr5 44893541 44893824 -154736326 + AluJb SINE Alu 32 311 -1 1483 150 4 39 chr5 44893967 44894227 -154735923 - AluSg SINE Alu -4 306 56 814 103 0 0 chr5 44894432 44894539 -154735611 + FLAM_C SINE Alu 1 107 -36 2078 138 0 3 chr5 44894677 44894989 -154735161 - AluSx SINE Alu -1 311 1 2098 97 25 7 chr5 44895221 44895499 -154734651 + AluSx SINE Alu 14 296 -16 1600 160 80 3 chr5 44895511 44895799 -154734351 - AluJo SINE Alu -2 310 1 191 314 14 0 chr5 44895920 44895990 -154734160 + L2 LINE L2 3242 3312 -1 629 273 61 0 chr5 44896040 44896205 -154733945 + LTR33 LTR ERVL 3 177 -344 2387 91 0 7 chr5 44896410 44896717 -154733433 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr5 44896917 44896938 -154733212 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 44897090 44897111 -154733039 + AT_rich Low_complexity Low_complexity 1 21 0 6090 55 3 1 chr5 44897292 44898043 -154732107 + L1PA6 LINE L1 5400 6151 -3 1667 123 102 25 chr5 44900369 44900653 -154729497 - AluSg SINE Alu -4 306 1 1038 161 72 21 chr5 44900658 44900851 -154729299 - AluJo SINE Alu 0 312 110 1071 274 65 71 chr5 44901512 44901753 -154728397 + LTR16C LTR ERVL 1 242 -249 1732 150 0 70 chr5 44901753 44902080 -154728070 - AluSx SINE Alu -8 304 1 1071 274 65 71 chr5 44902080 44902330 -154727820 + LTR16C LTR ERVL 242 489 -2 2311 102 0 7 chr5 44902753 44903057 -154727093 - AluSg SINE Alu -8 302 1 22 0 0 0 chr5 44904887 44904909 -154725241 + AT_rich Low_complexity Low_complexity 1 22 0 1195 105 0 6 chr5 44904947 44905119 -154725031 + L1PA16 LINE L1 5806 5976 -190 404 141 0 0 chr5 44905119 44905190 -154724960 + Alu SINE Alu 241 311 0 22 0 0 0 chr5 44905408 44905430 -154724720 + AT_rich Low_complexity Low_complexity 1 22 0 332 180 16 0 chr5 44905435 44905496 -154724654 - U7 snRNA snRNA 0 63 2 274 231 0 15 chr5 44906027 44906092 -154724058 - MLT2F LTR ERVL -599 64 1 2302 97 0 34 chr5 44906095 44906416 -154723734 - AluSg SINE Alu 0 310 1 1559 170 79 4 chr5 44906762 44907027 -154723123 - AluJb SINE Alu -27 285 1 4039 125 5 3 chr5 44907174 44907798 -154722352 - L1PB4 LINE L1 -3 6153 5529 856 183 0 14 chr5 44907881 44908023 -154722127 - FRAM SINE Alu -30 146 7 22 56 0 0 chr5 44908026 44908062 -154722088 + AT_rich Low_complexity Low_complexity 1 36 0 2139 123 0 0 chr5 44908062 44908347 -154721803 - AluY SINE Alu -26 285 1 857 173 0 0 chr5 44908370 44908497 -154721653 - FLAM_C SINE Alu -16 127 1 1899 148 101 3 chr5 44908498 44908667 -154721483 - L1PB4 LINE L1 -666 5490 5339 186 71 0 0 chr5 44908667 44908695 -154721455 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1899 148 101 3 chr5 44908695 44909025 -154721125 - L1PB4 LINE L1 -817 5339 4961 244 262 116 23 chr5 44910463 44910635 -154719515 - L1ME4a LINE L1 -47 6074 5887 25 0 0 0 chr5 44911065 44911090 -154719060 + AT_rich Low_complexity Low_complexity 1 25 0 3538 135 23 48 chr5 44911114 44911297 -154718853 - L1MA8 LINE L1 -2 6289 6103 1690 113 0 0 chr5 44911297 44911526 -154718624 + AluSg/x SINE Alu 77 305 -7 3538 135 23 48 chr5 44911526 44912073 -154718077 - L1MA8 LINE L1 -188 6103 5577 332 248 52 46 chr5 44912315 44912515 -154717635 + L1M4c LINE L1 2091 2304 -4078 1120 178 19 19 chr5 44912526 44912734 -154717416 + AluJb SINE Alu 85 292 -20 258 56 0 0 chr5 44912748 44912784 -154717366 + (CAA)n Simple_repeat Simple_repeat 3 38 0 2673 223 28 18 chr5 44912784 44913313 -154716837 + L1M4c LINE L1 2339 2861 -3521 426 20 0 0 chr5 44913313 44913364 -154716786 + (CA)n Simple_repeat Simple_repeat 2 52 0 2673 223 28 18 chr5 44913364 44913498 -154716652 + L1M4c LINE L1 2861 3016 -3366 2092 132 0 3 chr5 44913498 44913794 -154716356 - AluSx SINE Alu -17 295 1 2673 223 28 18 chr5 44913794 44913849 -154716301 + L1M4c LINE L1 3016 3069 -3313 913 206 6 0 chr5 44913849 44914019 -154716131 + FRAM SINE Alu 1 170 -6 1688 179 116 45 chr5 44914021 44914573 -154715577 + L1M4c LINE L1 3053 3643 -2739 305 320 56 0 chr5 44914587 44914712 -154715438 - L1 LINE L1 -3501 2645 2514 756 156 0 62 chr5 44914809 44914969 -154715181 + L1MA3 LINE L1 3649 3798 -2584 5166 175 23 81 chr5 44914982 44915136 -154715014 + L1 LINE L1 4328 4489 -1893 2204 123 0 0 chr5 44915136 44915436 -154714714 + AluSx SINE Alu 1 300 -12 5166 175 23 81 chr5 44915436 44916125 -154714025 + L1 LINE L1 4489 5216 -1166 2136 120 0 10 chr5 44916125 44916456 -154713694 + AluSg SINE Alu 1 310 0 2172 135 0 0 chr5 44916465 44916769 -154713381 + AluSg SINE Alu 1 304 -6 5166 175 23 81 chr5 44916769 44916785 -154713365 + L1 LINE L1 5224 5239 -1143 2107 113 14 3 chr5 44916785 44917077 -154713073 + AluSg SINE Alu 5 299 -11 5166 175 23 81 chr5 44917077 44917597 -154712553 + L1 LINE L1 5239 5639 -743 1873 174 69 48 chr5 44917602 44917827 -154712323 - MSTA LTR MaLR 0 428 188 2237 116 0 0 chr5 44917827 44918120 -154712030 + AluSx SINE Alu 3 295 -17 1873 174 69 48 chr5 44918120 44918313 -154711837 - MSTA LTR MaLR -240 188 1 8959 184 11 11 chr5 44918313 44919964 -154710186 - MSTA-int LTR MaLR 0 1651 1 1319 149 14 9 chr5 44919964 44920178 -154709972 - MSTB LTR MaLR 0 426 212 8837 188 44 28 chr5 44920182 44922857 -154707293 + L1MA3 LINE L1 3788 6513 -28 222 241 19 0 chr5 44923498 44923552 -154706598 - L2 LINE L2 -37 3235 3181 2242 117 0 0 chr5 44924556 44924856 -154705294 - AluSx SINE Alu -12 300 1 2011 120 0 10 chr5 44924919 44925211 -154704939 - AluSx SINE Alu -18 294 6 346 249 111 35 chr5 44926035 44926110 -154704040 - L1ME4a LINE L1 -5 6116 6048 2306 94 0 3 chr5 44926110 44926409 -154703741 - AluSc SINE Alu -11 298 1 346 249 111 35 chr5 44926409 44926783 -154703367 - L1ME4a LINE L1 -73 6048 5603 26 50 0 0 chr5 44926819 44926859 -154703291 + AT_rich Low_complexity Low_complexity 1 40 0 616 126 0 0 chr5 44928276 44928371 -154701779 - AluSg/x SINE Alu 0 310 216 195 42 0 0 chr5 44928634 44928658 -154701492 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 429 371 70 40 chr5 44929477 44929749 -154700401 + L2 LINE L2 2985 3264 -8 463 364 62 18 chr5 44929814 44930086 -154700064 - L2 LINE L2 -181 3091 2808 391 230 23 11 chr5 44931043 44931130 -154699020 - MER81 DNA DNA -22 92 5 21 0 0 0 chr5 44931442 44931463 -154698687 + AT_rich Low_complexity Low_complexity 1 21 0 299 233 80 49 chr5 44932056 44932219 -154697931 - L1M4 LINE L1 -3320 2826 2659 251 341 45 23 chr5 44932268 44932400 -154697750 - L1MEd LINE L1 -5799 320 186 476 265 123 51 chr5 44932494 44933046 -154697104 - L1ME2 LINE L1 -95 6069 5470 461 329 95 25 chr5 44933632 44933875 -154696275 - MIR SINE MIR 0 262 3 747 249 112 17 chr5 44935038 44935271 -154694879 - MIR SINE MIR 0 262 8 213 193 0 35 chr5 44935282 44935339 -154694811 + (TA)n Simple_repeat Simple_repeat 1 55 0 2132 108 3 16 chr5 44935413 44935718 -154694432 - AluSx SINE Alu -11 301 1 640 311 228 34 chr5 44935729 44937110 -154693040 - L2 LINE L2 -407 2907 1073 2330 93 3 0 chr5 44937110 44937412 -154692738 - AluSc SINE Alu -2 307 5 640 311 228 34 chr5 44937412 44937709 -154692441 - L2 LINE L2 -2241 1073 835 24 53 0 0 chr5 44937971 44938009 -154692141 + AT_rich Low_complexity Low_complexity 1 38 0 254 200 0 46 chr5 44938029 44938094 -154692056 + L1MC4 LINE L1 6652 6713 -1329 484 314 35 45 chr5 44938608 44938895 -154691255 + MER102a DNA MER1_type 38 321 -9 1846 159 3 20 chr5 44939926 44940221 -154689929 + AluJo SINE Alu 1 290 -22 282 56 0 0 chr5 44940221 44940257 -154689893 + (TA)n Simple_repeat Simple_repeat 2 37 0 1302 127 0 0 chr5 44941136 44941309 -154688841 + AluSx SINE Alu 20 192 -120 1899 139 42 0 chr5 44941439 44941727 -154688423 - AluSg SINE Alu -10 300 1 405 299 82 16 chr5 44942682 44942876 -154687274 - MIR SINE MIR -50 212 6 23 0 0 0 chr5 44943538 44943561 -154686589 + AT_rich Low_complexity Low_complexity 1 23 0 2806 113 27 7 chr5 44944394 44944838 -154685312 - L1PA13 LINE L1 -2 6161 5709 961 141 42 5 chr5 44945509 44945700 -154684450 - L1 LINE L1 -787 5359 5162 1643 151 4 4 chr5 44945700 44945975 -154684175 + L1PA16 LINE L1 5884 6162 -4 486 307 0 0 chr5 44946220 44946347 -154683803 - L2 LINE L2 -5 3308 3182 589 316 81 0 chr5 44946492 44946701 -154683449 - MIR SINE MIR -20 242 17 243 0 0 0 chr5 44946820 44946847 -154683303 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2255 19 0 0 chr5 44946847 44947107 -154683043 - L1PA5 LINE L1 -11 6143 5884 1031 25 0 0 chr5 44947107 44947226 -154682924 + L1PA5 LINE L1 5762 5880 -275 387 270 80 43 chr5 44947262 44947425 -154682725 - MER5A DNA MER1_type 0 189 21 2183 122 53 46 chr5 44947532 44947707 -154682443 + L1MA4 LINE L1 5887 6059 -241 2307 96 0 0 chr5 44947707 44947999 -154682151 + AluSc SINE Alu 6 297 -12 2183 122 53 46 chr5 44947999 44948234 -154681916 + L1MA4 LINE L1 6059 6300 0 295 186 94 86 chr5 44948741 44948892 -154681258 - L1MC4 LINE L1 -145 7897 7636 2130 118 23 3 chr5 44948943 44949247 -154680903 + AluSx SINE Alu 1 310 -2 2382 158 25 0 chr5 44949267 44949671 -154680479 - L1MC1 LINE L1 -4 6329 5916 629 244 65 6 chr5 44951430 44951598 -154678552 - MER63A DNA MER1_type -28 182 5 2084 107 4 4 chr5 44951787 44952094 -154678056 - AluSp SINE Alu 0 309 3 183 42 0 0 chr5 44952099 44952123 -154678027 + (T)n Simple_repeat Simple_repeat 1 24 0 202 200 25 0 chr5 44953000 44953040 -154677110 - L2 LINE L2 -2 3311 3271 322 318 110 12 chr5 44953105 44953278 -154676872 + L2 LINE L2 3124 3313 0 323 252 56 42 chr5 44954220 44954363 -154675787 + MIR SINE MIR 69 213 -49 509 328 134 0 chr5 44955484 44955685 -154674465 + MIR SINE MIR 35 262 0 1991 140 0 3 chr5 44955725 44956018 -154674132 - AluSx SINE Alu -12 300 9 235 354 31 31 chr5 44957522 44957683 -154672467 + MER5A DNA MER1_type 8 168 -21 * 304 301 56 42 chr5 44957544 44957687 -154672463 - MER5B DNA MER1_type -16 162 18 2198 118 0 28 chr5 44958363 44958684 -154671466 - AluSx SINE Alu 0 312 1 655 223 82 68 chr5 44959748 44959969 -154670181 - L1ME LINE L1 -498 5672 5456 198 0 0 0 chr5 44959969 44959991 -154670159 + (TA)n Simple_repeat Simple_repeat 2 23 0 1851 171 0 3 chr5 44959991 44960284 -154669866 - AluSx SINE Alu -20 292 1 655 223 82 68 chr5 44960284 44960445 -154669705 - L1ME LINE L1 -713 5457 5276 2913 93 2 41 chr5 44960464 44960709 -154669441 - L1PB1 LINE L1 -7 6144 5920 2211 114 0 23 chr5 44960709 44961017 -154669133 - AluSg SINE Alu -8 302 2 2913 93 2 41 chr5 44961017 44961188 -154668962 - L1PB1 LINE L1 -231 5920 5744 234 181 21 96 chr5 44961235 44961329 -154668821 + L1M4 LINE L1 3140 3226 -2920 2234 105 3 0 chr5 44961411 44961705 -154668445 - AluSc SINE Alu -14 295 1 419 164 60 0 chr5 44961743 44961844 -154668306 - AluSp/q SINE Alu 0 317 213 241 301 34 61 chr5 44962259 44962464 -154667686 - L1MEd LINE L1 -4881 1238 1044 2053 145 26 0 chr5 44962464 44962767 -154667383 - AluSx SINE Alu -1 311 1 241 301 34 61 chr5 44962767 44962887 -154667263 - L1MEd LINE L1 -5075 1044 922 290 45 23 0 chr5 44962899 44962943 -154667207 + (TA)n Simple_repeat Simple_repeat 1 45 0 2064 139 7 3 chr5 44962943 44963253 -154666897 - AluSq SINE Alu -2 311 1 811 133 78 33 chr5 44963304 44963484 -154666666 - L1MC2 LINE L1 0 6344 6157 22 0 0 0 chr5 44963484 44963506 -154666644 + AT_rich Low_complexity Low_complexity 1 22 0 390 198 26 4 chr5 44963527 44963618 -154666532 - L1MA6 LINE L1 -50 6253 6165 22 0 0 0 chr5 44963653 44963675 -154666475 + AT_rich Low_complexity Low_complexity 1 22 0 346 273 0 0 chr5 44964467 44964555 -154665595 - L1PB4 LINE L1 -8 6148 6061 863 191 5 113 chr5 44964851 44964934 -154665216 + FAM SINE Alu 1 4294967212 -269 7467 57 0 0 chr5 44964934 44966203 -154663947 - L1PA8 LINE L1 -2 6170 4879 863 191 5 113 chr5 44966203 44966323 -154663827 + FAM SINE Alu -85 46 -3 1000 125 80 0 chr5 44968384 44968560 -154661590 - L1MB3 LINE L1 0 6183 5994 2354 78 0 10 chr5 44968763 44969059 -154661091 - AluY SINE Alu -18 293 1 1152 183 31 58 chr5 44969193 44969417 -154660733 - MER20 DNA MER1_type -1 218 1 1138 173 81 8 chr5 44969432 44969680 -154660470 - L1MD3 LINE L1 0 7995 7730 2192 101 10 10 chr5 44969708 44970005 -154660145 - AluSx SINE Alu -15 297 1 1015 255 118 42 chr5 44971675 44972150 -154658000 - LTR33 LTR ERVL -7 514 4 2104 144 0 3 chr5 44972193 44972505 -154657645 + AluJb SINE Alu 1 311 -1 2016 143 0 0 chr5 44973215 44973501 -154656649 - AluSx SINE Alu -6 306 21 1308 238 120 27 chr5 44974473 44974948 -154655202 + MER113 DNA MER1_type? 2 520 -1 223 265 137 0 chr5 44974962 44975064 -154655086 + MIR3 SINE MIR 81 196 -12 352 323 15 15 chr5 44976135 44976265 -154653885 + MIR3 SINE MIR 66 195 -13 2187 106 3 7 chr5 44976485 44976786 -154653364 - AluSq SINE Alu -13 300 1 188 290 32 0 chr5 44977392 44977454 -154652696 + L3 LINE CR1 1300 1363 -214 249 254 34 0 chr5 44977556 44977615 -154652535 - LTR16C LTR ERVL -18 473 413 2336 179 26 0 chr5 44978988 44979374 -154650776 - MSTD LTR MaLR 0 396 1 246 224 30 0 chr5 44979473 44979540 -154650610 + (CA)n Simple_repeat Simple_repeat 2 70 0 207 226 38 0 chr5 44979701 44979754 -154650396 + GA-rich Low_complexity Low_complexity 5 59 0 1888 187 55 25 chr5 44981660 44982023 -154648127 - MLT1A2 LTR MaLR 0 374 1 688 199 142 0 chr5 44982401 44982542 -154647608 - ERVL-B1 LTR ERVL -5503 261 101 328 125 0 0 chr5 44982616 44982664 -154647486 - MLT2B1 LTR ERVL -8 512 465 39 0 0 0 chr5 44982686 44982725 -154647425 + AT_rich Low_complexity Low_complexity 1 39 0 363 281 133 33 chr5 44982726 44982936 -154647214 - L1MEc LINE L1 -5402 994 764 1070 295 75 33 chr5 44983028 44983537 -154646613 - L1MEc LINE L1 -5836 560 31 1772 171 7 7 chr5 44983635 44983940 -154646210 - AluJo SINE Alu -7 305 1 2232 118 3 9 chr5 44984101 44984416 -154645734 - AluSp SINE Alu 0 313 1 327 113 0 0 chr5 44985316 44985369 -154644781 + (CA)n Simple_repeat Simple_repeat 2 54 0 2307 107 7 116 chr5 44986179 44986600 -154643550 - THE1C LTR MaLR 0 375 1 11326 109 34 9 chr5 44986600 44988141 -154642009 - THE1C-int LTR MaLR 0 1580 1 2689 131 5 0 chr5 44988141 44988514 -154641636 - THE1C LTR MaLR 0 375 1 543 243 141 23 chr5 44989009 44989060 -154641090 - MIR SINE MIR -10 252 208 1691 181 60 26 chr5 44989060 44989408 -154640742 + MLT1A1 LTR MaLR 2 361 -4 543 243 141 23 chr5 44989408 44989533 -154640617 - MIR SINE MIR -54 208 55 288 250 0 0 chr5 44989816 44989888 -154640262 - MER3 DNA MER1_type 0 209 138 691 199 39 19 chr5 44989921 44990077 -154640073 - MER3 DNA MER1_type -49 160 2 704 197 20 14 chr5 44990296 44990443 -154639707 - MLT1F LTR MaLR 0 542 395 733 190 86 0 chr5 44990449 44990623 -154639527 + MER53 DNA DNA 1 189 0 * 1545 231 71 22 chr5 44990623 44990997 -154639153 - MLT1F LTR MaLR -142 400 7 443 264 16 16 chr5 44991027 44991148 -154639002 + L2 LINE L2 3192 3312 -1 2189 124 0 10 chr5 44991377 44991684 -154638466 + AluSx SINE Alu 1 304 -8 2149 121 3 19 chr5 44995772 44996086 -154634064 + AluSx SINE Alu 1 309 -3 320 281 31 16 chr5 44996620 44996748 -154633402 - MIR3 SINE MIR -26 182 53 2362 94 0 0 chr5 44997304 44997603 -154632547 - AluSq SINE Alu -14 299 1 477 317 36 55 chr5 44997917 44998226 -154631924 + L3b LINE CR1 1146 1448 -135 316 235 0 29 chr5 44998275 44998343 -154631807 - MER58 DNA MER1_type 0 2420 2355 455 311 31 12 chr5 44998369 44998530 -154631620 - LTR16C LTR ERVL -239 252 89 2193 109 6 10 chr5 45000091 45000403 -154629747 + AluSx SINE Alu 1 311 -1 6024 86 7 5 chr5 45000489 45001303 -154628847 + L1PB1 LINE L1 5304 6119 -32 2393 89 7 0 chr5 45001406 45001710 -154628440 + L1PB1 LINE L1 5846 6151 0 204 86 57 0 chr5 45001968 45002003 -154628147 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 804 206 85 155 chr5 45002443 45002797 -154627353 + HsTC2 DNA Tc2 1 329 -1569 483 244 25 46 chr5 45002779 45002976 -154627174 + HsTC2 DNA Tc2 1706 1898 0 * 2023 87 65 43 chr5 45005345 45005668 -154624482 + L1MC1 LINE L1 6004 6333 0 283 191 147 0 chr5 45006143 45006211 -154623939 + L2 LINE L2 3221 3298 -15 2147 142 0 0 chr5 45006376 45006685 -154623465 - AluSx SINE Alu -3 309 1 219 295 16 0 chr5 45008471 45008532 -154621618 - MIR SINE MIR -6 256 195 381 357 20 20 chr5 45008568 45008757 -154621393 + L2 LINE L2 2546 2734 -580 337 320 21 0 chr5 45008757 45008854 -154621296 - MER91B DNA MER1_type 0 190 92 374 276 8 82 chr5 45008870 45009004 -154621146 - MER91B DNA MER1_type -63 127 4 587 248 270 13 chr5 45009006 45009045 -154621105 + L2 LINE L2 2724 2752 -561 1990 50 4 23 chr5 45009045 45009329 -154620821 + L1PA4 LINE L1 5889 6167 0 587 248 270 13 chr5 45009329 45009708 -154620442 + L2 LINE L2 2752 3313 0 657 299 28 31 chr5 45010318 45010572 -154619578 - MIR SINE MIR -8 254 2 231 291 119 37 chr5 45010781 45010915 -154619235 + MIR SINE MIR 2 146 -116 1809 110 100 7 chr5 45011215 45011496 -154618654 - AluSq SINE Alu -6 307 1 1801 111 100 7 chr5 45012034 45012314 -154617836 - AluSq SINE Alu -7 306 1 355 127 48 16 chr5 45012545 45012608 -154617542 + L2 LINE L2 3241 3305 -8 241 211 18 0 chr5 45013304 45013423 -154616727 + GA-rich Low_complexity Low_complexity 1 121 0 255 114 0 0 chr5 45015003 45015047 -154615103 + (GA)n Simple_repeat Simple_repeat 1 44 0 409 314 129 33 chr5 45015495 45015705 -154614445 - L1ME1 LINE L1 -7 6159 5930 780 180 60 9 chr5 45015777 45015994 -154614156 + Charlie5 DNA MER1_type 2357 2584 -28 352 318 53 69 chr5 45016085 45016274 -154613876 + L2 LINE L2 3082 3267 -5 238 267 69 15 chr5 45016318 45016449 -154613701 + L1ME LINE L1 5690 5827 -294 3232 203 49 38 chr5 45016451 45017255 -154612895 + L1M3 LINE L1 3985 4802 -1344 1789 173 7 0 chr5 45017255 45017555 -154612595 + AluJb SINE Alu 1 302 -10 3232 203 49 38 chr5 45017555 45017663 -154612487 + L1M3 LINE L1 4802 4907 -1239 39888 61 3 1 chr5 45017733 45023855 -154606295 + L1PA5 LINE L1 11 6148 -6 3786 182 20 61 chr5 45023855 45024453 -154605697 - L1MA9 LINE L1 -73 6239 5713 841 135 7 7 chr5 45024453 45024594 -154605556 - L1PB3 LINE L1 0 6154 6014 3786 182 20 61 chr5 45024594 45025166 -154604984 - L1MA9 LINE L1 -599 5713 5119 1788 197 26 36 chr5 45025185 45025452 -154604698 + L1M3 LINE L1 4892 5160 -1023 972 148 62 6 chr5 45025452 45025628 -154604522 + L1PA16 LINE L1 5979 6164 -2 1788 197 26 36 chr5 45025628 45025961 -154604189 + L1M3 LINE L1 5160 5486 -697 * 1948 201 76 4 chr5 45025958 45026470 -154603680 + L1 LINE L1 4288 4836 -1310 483 141 22 0 chr5 45026482 45026574 -154603576 + L1MB2 LINE L1 6074 6167 -4 281 208 218 41 chr5 45026604 45026742 -154603408 + L1ME4a LINE L1 5819 5931 -190 1722 128 51 90 chr5 45026742 45027132 -154603018 - THE1C LTR MaLR 0 375 1 281 208 218 41 chr5 45027132 45027190 -154602960 + L1ME4a LINE L1 5931 6050 -71 4062 155 39 4 chr5 45027243 45027971 -154602179 - L1PA15 LINE L1 0 6165 5413 21 0 0 0 chr5 45027983 45028004 -154602146 + AT_rich Low_complexity Low_complexity 1 21 0 363 286 137 9 chr5 45029040 45029267 -154600883 + MER112 DNA MER1_type 1 256 0 441 0 0 0 chr5 45029441 45029490 -154600660 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr5 45030296 45030318 -154599832 + AT_rich Low_complexity Low_complexity 1 22 0 3932 153 138 29 chr5 45030319 45031471 -154598679 + L1PA16 LINE L1 4200 5226 -940 188 0 74 0 chr5 45031471 45031498 -154598652 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3932 153 138 29 chr5 45031498 45031789 -154598361 + L1PA16 LINE L1 5226 5484 -682 216 0 0 0 chr5 45031789 45031813 -154598337 + (CA)n Simple_repeat Simple_repeat 2 25 0 3932 153 138 29 chr5 45031813 45031829 -154598321 + L1PA16 LINE L1 5484 5497 -669 1958 126 105 18 chr5 45031829 45032163 -154597987 + THE1B LTR MaLR 2 364 0 3932 153 138 29 chr5 45032163 45032457 -154597693 + L1PA16 LINE L1 5497 6162 -4 289 193 0 0 chr5 45032694 45032751 -154597399 - AluJo SINE Alu -1 301 245 576 253 0 32 chr5 45032751 45032905 -154597245 - AluJo SINE Alu -143 169 21 261 148 65 0 chr5 45032918 45032972 -154597178 - FLAM SINE Alu -8 125 78 321 289 128 45 chr5 45033021 45033177 -154596973 - MER5A DNA MER1_type 0 189 21 207 388 0 0 chr5 45033331 45033398 -154596752 - L2 LINE L2 -92 3180 3114 196 339 36 0 chr5 45033419 45033475 -154596675 + MER5A DNA MER1_type 43 100 -89 232 301 36 24 chr5 45033664 45033747 -154596403 - L2 LINE L2 -378 2936 2853 201 214 54 18 chr5 45033790 45033846 -154596304 - L2 LINE L2 -1 3312 3255 352 96 100 19 chr5 45034151 45034249 -154595901 - L1PA16 LINE L1 -233 5898 5793 397 143 0 0 chr5 45034259 45034322 -154595828 - THE1A LTR MaLR 0 355 293 1133 250 87 70 chr5 45035252 45035859 -154594291 - L2 LINE L2 0 3313 2687 2262 106 3 3 chr5 45036323 45036624 -154593526 - AluSg SINE Alu -9 301 1 2013 115 11 0 chr5 45037006 45037308 -154592842 + AluSx SINE Alu 1 305 0 282 283 80 29 chr5 45037864 45038002 -154592148 + L3b LINE CR1 1115 1259 -324 2076 147 0 3 chr5 45038259 45038566 -154591584 - AluSx SINE Alu -6 306 1 1157 223 90 10 chr5 45039309 45039609 -154590541 + MLT1H LTR MaLR 1 324 -225 2279 81 0 42 chr5 45039619 45039928 -154590222 + AluSc SINE Alu 1 296 -13 554 241 58 0 chr5 45039964 45040101 -154590049 + MLT1H LTR MaLR 405 549 0 536 310 30 30 chr5 45040536 45040733 -154589417 - MIR SINE MIR -16 246 50 680 281 86 31 chr5 45041088 45041380 -154588770 + MLT1J LTR MaLR 11 318 -193 25 65 0 0 chr5 45041582 45041628 -154588522 + AT_rich Low_complexity Low_complexity 1 46 0 296 264 22 44 chr5 45042538 45042629 -154587521 - MER5B DNA MER1_type 0 178 90 210 267 44 44 chr5 45042563 45042653 -154587497 + MER5A DNA MER1_type 37 126 -63 * 483 244 62 28 chr5 45045328 45045504 -154584646 - MER20B DNA MER1_type -595 188 7 473 313 21 7 chr5 45045984 45046128 -154584022 - MER5A DNA MER1_type 0 189 44 334 236 34 22 chr5 45046221 45046310 -154583840 - MER5A DNA MER1_type -55 134 45 25 0 0 0 chr5 45046390 45046415 -154583735 + AT_rich Low_complexity Low_complexity 1 25 0 1324 214 81 3 chr5 45047175 45047483 -154582667 + MLT1A1 LTR MaLR 6 337 -28 270 146 0 0 chr5 45047668 45047709 -154582441 + MLT1A1 LTR MaLR 325 365 0 40 0 0 0 chr5 45047977 45048017 -154582133 + AT_rich Low_complexity Low_complexity 1 40 0 1380 127 20 57 chr5 45048387 45048632 -154581518 - MER46A DNA MER2_type 0 236 1 568 251 21 10 chr5 45048818 45049076 -154581074 + MER46C DNA MER2_type 8 309 -29 2099 135 0 0 chr5 45049647 45049936 -154580214 - AluSx SINE Alu -18 294 6 283 261 63 9 chr5 45050882 45050993 -154579157 - MER104 DNA Tc2 -5 175 59 669 150 110 29 chr5 45051737 45051910 -154578240 + MLT1C LTR MaLR 65 251 -216 2185 108 0 7 chr5 45053225 45053520 -154576630 - AluSx SINE Alu -19 293 1 1341 132 5 10 chr5 45054113 45054301 -154575849 - AluSq SINE Alu -6 307 119 192 40 0 0 chr5 45054301 45054326 -154575824 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1341 132 5 10 chr5 45054326 45054341 -154575809 - AluSq SINE Alu -194 119 105 214 302 21 99 chr5 45054356 45054431 -154575719 + L2 LINE L2 1639 1718 -1596 2160 106 0 7 chr5 45054431 45054733 -154575417 + AluSx SINE Alu 6 305 -7 214 302 21 99 chr5 45054733 45054899 -154575251 + L2 LINE L2 1718 1861 -1453 251 164 66 0 chr5 45055158 45055225 -154574925 - MLT1G1 LTR MaLR 0 571 478 696 351 107 41 chr5 45055321 45056171 -154573979 + L2 LINE L2 1980 2885 -429 446 305 13 40 chr5 45056913 45057064 -154573086 + L2 LINE L2 3167 3313 0 738 237 96 19 chr5 45057518 45058189 -154571961 + L1ME3A LINE L1 5374 6170 0 21 0 0 0 chr5 45058252 45058273 -154571877 + AT_rich Low_complexity Low_complexity 1 21 0 211 368 28 19 chr5 45058517 45058623 -154571527 + L2 LINE L2 3123 3229 -43 216 143 0 0 chr5 45058653 45058695 -154571455 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 866 292 32 12 chr5 45058955 45059205 -154570945 + MIR SINE MIR 3 257 -5 280 280 21 0 chr5 45059217 45059310 -154570840 + L3b LINE CR1 1310 1404 -179 288 306 149 0 chr5 45059332 45059466 -154570684 - MIR3 SINE MIR -18 190 37 596 274 44 38 chr5 45059786 45060025 -154570125 + MIR SINE MIR 15 262 0 294 170 0 0 chr5 45060483 45060530 -154569620 - tRNA-Gly-GGA tRNA tRNA -28 47 1 408 175 10 58 chr5 45061246 45061349 -154568801 - L1PB4 LINE L1 0 6156 6059 309 313 88 48 chr5 45062442 45062589 -154567561 + MIR3 SINE MIR 34 186 -22 189 125 0 0 chr5 45062579 45062611 -154567539 + MIR SINE MIR 108 139 -123 * 2233 117 0 3 chr5 45063023 45063330 -154566820 - AluSp SINE Alu -7 306 1 427 329 100 4 chr5 45064026 45064257 -154565893 - MIR SINE MIR -8 254 2 495 302 59 12 chr5 45064452 45064621 -154565529 + MER5B DNA MER1_type 2 178 0 414 311 79 59 chr5 45064662 45064916 -154565234 + MIR SINE MIR 1 259 -3 183 261 0 0 chr5 45065518 45065564 -154564586 + L2 LINE L2 3137 3182 -90 515 294 51 23 chr5 45067571 45067748 -154562402 + MER5A DNA MER1_type 8 189 0 21 0 0 0 chr5 45068735 45068756 -154561394 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr5 45068850 45068872 -154561278 + AT_rich Low_complexity Low_complexity 1 22 0 43799 45 1 1 chr5 45068940 45075091 -154555059 - L1PA4 LINE L1 -3 6152 1 314 295 13 34 chr5 45075195 45075344 -154554806 + CT-rich Low_complexity Low_complexity 5 150 0 197 358 49 16 chr5 45075398 45075521 -154554629 - L2 LINE L2 -8 3264 3138 23 0 0 0 chr5 45075795 45075818 -154554332 + AT_rich Low_complexity Low_complexity 1 23 0 5780 159 15 7 chr5 45075823 45077605 -154552545 - L1PB3 LINE L1 -7 6147 4350 254 333 83 42 chr5 45077743 45077839 -154552311 + MIR3 SINE MIR 15 122 -86 2598 121 0 0 chr5 45077839 45078203 -154551947 + THE1B LTR MaLR 1 364 0 254 333 83 42 chr5 45078203 45078274 -154551876 + MIR3 SINE MIR 122 189 -19 1477 189 75 62 chr5 45078381 45078768 -154551382 + MSTD LTR MaLR 5 396 0 1541 142 6 119 chr5 45079157 45079494 -154550656 + AluJb SINE Alu 1 299 -3 217 208 0 21 chr5 45080628 45080676 -154549474 + MIR SINE MIR 95 141 -121 3841 248 68 29 chr5 45080942 45081342 -154548808 - L1MEc LINE L1 -4907 1489 1106 2023 143 0 0 chr5 45081342 45081643 -154548507 - AluSx SINE Alu -11 301 1 3841 248 68 29 chr5 45081643 45082643 -154547507 - L1MEc LINE L1 -5290 1106 35 454 296 61 58 chr5 45082809 45083170 -154546980 - MLT1J LTR MaLR -49 462 62 633 247 28 36 chr5 45084035 45084282 -154545868 - L1MC5 LINE L1 -13 7948 7704 252 217 77 84 chr5 45084309 45084414 -154545736 - L1MC5 LINE L1 -327 7634 7529 2567 56 0 3 chr5 45084414 45084716 -154545434 - AluY SINE Alu -10 301 1 252 217 77 84 chr5 45084716 45084753 -154545397 - L1MC5 LINE L1 -432 7529 7493 634 350 129 33 chr5 45085481 45086079 -154544071 - L3 LINE CR1 -89 1488 834 6871 47 1 2 chr5 45086089 45086933 -154543217 + L1PA7 LINE L1 5311 6153 -1 1762 252 53 31 chr5 45086944 45087456 -154542694 + L1M3e LINE L1 1 523 -6507 1832 231 138 2 chr5 45087490 45088099 -154542051 + L1M3e LINE L1 1830 2521 -4516 215 323 47 24 chr5 45089026 45089153 -154540997 - MIR SINE MIR -46 216 87 205 363 0 11 chr5 45090143 45090234 -154539916 + L2 LINE L2 3206 3295 -18 751 277 128 28 chr5 45090574 45090971 -154539179 + MLT1J LTR MaLR 6 442 -69 2632 179 37 7 chr5 45091399 45091857 -154538293 + MER70A LTR ERVL 1 472 0 388 315 18 59 chr5 45092337 45092559 -154537591 + Charlie8 DNA MER1_type 96 308 -2109 376 285 180 76 chr5 45093205 45093689 -154536461 - MLT1H LTR MaLR -14 535 2 556 296 58 27 chr5 45095900 45096228 -154533922 - L1ME LINE L1 -413 5749 5412 989 135 83 65 chr5 45096262 45096491 -154533659 - THE1C LTR MaLR 0 375 143 225 183 0 84 chr5 45096542 45096613 -154533537 - L1MEd LINE L1 -2161 3968 3904 302 289 83 25 chr5 45096656 45096898 -154533252 - L1MEd LINE L1 -2301 3828 3573 1575 116 107 77 chr5 45096908 45097235 -154532915 + MER1B DNA MER1_type 1 337 0 376 252 92 38 chr5 45097255 45097517 -154532633 - L1MEd LINE L1 -2613 3516 3241 423 293 37 37 chr5 45097728 45098022 -154532128 - L1MEd LINE L1 -3152 2977 2684 276 323 48 0 chr5 45098380 45098566 -154531584 - L1MEd LINE L1 -3600 2529 2335 578 179 77 0 chr5 45098642 45098759 -154531391 - L1PB4 LINE L1 -19 6137 6012 570 284 40 36 chr5 45098981 45099282 -154530868 - L1MEd LINE L1 -841 1649 1405 2045 114 4 0 chr5 45099322 45099602 -154530548 - AluSq SINE Alu -32 281 1 568 301 98 57 chr5 45099602 45100208 -154529942 - L1MEd LINE L1 -4872 1247 682 5651 153 17 2 chr5 45100844 45101797 -154528353 - L1MC2 LINE L1 -23 6321 5355 271 292 58 8 chr5 45101791 45101911 -154528239 + L1MC4a LINE L1 5609 5734 -387 * 333 0 0 0 chr5 45101944 45101981 -154528169 + (GA)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr5 45102227 45102250 -154527900 + AT_rich Low_complexity Low_complexity 1 23 0 5214 102 12 9 chr5 45102252 45103030 -154527120 - L1PB2 LINE L1 -7 6144 5365 238 69 0 0 chr5 45103030 45103059 -154527091 - U2 snRNA snRNA -153 35 7 4912 195 11 57 chr5 45103067 45103671 -154526479 - L1PB2 LINE L1 -769 5377 4747 2278 85 0 14 chr5 45103671 45103965 -154526185 - AluY SINE Alu -19 292 3 4912 195 11 57 chr5 45103965 45104387 -154525763 - L1PB2 LINE L1 -1399 4747 4422 297 0 0 0 chr5 45104387 45104420 -154525730 + (CA)n Simple_repeat Simple_repeat 2 34 0 4912 195 11 57 chr5 45104420 45104707 -154525443 - L1PB2 LINE L1 -1724 4422 4123 804 246 48 68 chr5 45105036 45105434 -154524716 - MLT1B LTR MaLR 0 390 1 264 286 18 9 chr5 45105490 45105602 -154524548 + L1MC4a LINE L1 5820 5932 -1876 1977 105 4 8 chr5 45105884 45106151 -154523999 - AluSx SINE Alu -18 294 29 293 250 38 0 chr5 45106496 45106576 -154523574 + CT-rich Low_complexity Low_complexity 4 86 0 1080 266 44 12 chr5 45106987 45107307 -154522843 + HERV16 LTR ERVL 963 1292 -3704 1142 283 95 41 chr5 45107375 45108531 -154521619 + HERV16 LTR ERVL 1689 2924 -2072 941 308 86 15 chr5 45109517 45109913 -154520237 + LTR16B LTR ERVL 35 458 -6 479 357 77 12 chr5 45109929 45110254 -154519896 - L1MEc LINE L1 -4131 2265 1920 285 300 37 45 chr5 45110371 45110614 -154519536 - L1MEc LINE L1 -4653 1743 1503 302 91 18 0 chr5 45110673 45110728 -154519422 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 259 287 120 5 chr5 45111306 45111515 -154518635 - L1MEc LINE L1 -4971 1234 1002 289 320 13 0 chr5 45112703 45112781 -154517369 - L3 LINE CR1 -621 956 878 2300 117 0 0 chr5 45113498 45113807 -154516343 + AluSx SINE Alu 3 311 -1 343 229 42 110 chr5 45114283 45114329 -154515821 + MIR SINE MIR 21 69 -139 2051 157 0 0 chr5 45114329 45114635 -154515515 - AluSx SINE Alu -6 306 1 343 229 42 110 chr5 45114635 45114706 -154515444 + MIR SINE MIR 69 130 -78 627 311 250 11 chr5 45114745 45115125 -154515025 + L2 LINE L2 2434 2904 -410 2101 122 3 35 chr5 45115185 45115504 -154514646 - AluSc SINE Alu 0 309 1 285 29 0 0 chr5 45115560 45115595 -154514555 - tRNA-Cys-TGC tRNA tRNA -38 37 3 269 240 260 20 chr5 45115706 45115806 -154514344 - L2 LINE L2 -37 3276 3153 278 298 24 0 chr5 45115904 45115988 -154514162 + L2 LINE L2 3187 3272 0 825 136 0 8 chr5 45116084 45116216 -154513934 + FLAM_C SINE Alu 2 132 -1 534 138 73 24 chr5 45116953 45117076 -154513074 - L1MB7 LINE L1 0 6184 6056 2150 121 0 31 chr5 45117386 45117708 -154512442 - AluSx SINE Alu 0 312 1 1053 264 122 81 chr5 45117854 45118537 -154511613 - MER50 LTR ERV1 -23 711 1 462 344 40 54 chr5 45118791 45119140 -154511010 + L2 LINE L2 2876 3219 -94 678 205 0 8 chr5 45119293 45119415 -154510735 - FLAM_A SINE Alu -12 121 1 182 360 82 20 chr5 45119677 45119824 -154510326 + L2 LINE L2 2338 2493 -821 556 300 17 6 chr5 45121383 45121563 -154508587 + MIR SINE MIR 81 262 0 397 303 9 9 chr5 45122406 45122515 -154507635 - MER5B DNA MER1_type -68 110 2 1682 222 4 27 chr5 45123209 45123672 -154506478 + MLT1D LTR MaLR 1 497 -8 423 203 34 0 chr5 45124754 45124872 -154505278 - L1MC4 LINE L1 -2 8040 7919 306 172 0 43 chr5 45124872 45124965 -154505185 + CT-rich Low_complexity Low_complexity 3 91 0 32 0 0 0 chr5 45124974 45125006 -154505144 + AT_rich Low_complexity Low_complexity 1 32 0 404 306 8 0 chr5 45125066 45125187 -154504963 - L1MC4 LINE L1 -124 7918 7797 2117 278 18 5 chr5 45125187 45125756 -154504394 - MLT1G LTR MaLR 0 590 15 353 329 42 18 chr5 45125831 45125998 -154504152 + MIR SINE MIR 32 202 -60 197 95 0 24 chr5 45126378 45126420 -154503730 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 6315 78 8 2 chr5 45126422 45126767 -154503383 - L1PB1 LINE L1 -13 6138 5797 225 0 0 0 chr5 45126767 45126792 -154503358 + (TA)n Simple_repeat Simple_repeat 2 26 0 6315 78 8 2 chr5 45126792 45127678 -154502472 - L1PB1 LINE L1 -354 5797 4896 840 286 60 20 chr5 45127708 45128057 -154502093 - MLT1L LTR MaLR -18 597 235 2475 57 3 0 chr5 45128338 45128637 -154501513 - AluY SINE Alu -11 300 1 765 279 69 28 chr5 45129178 45129569 -154500581 - MLT1I LTR MaLR -2 407 1 195 42 0 0 chr5 45130270 45130294 -154499856 + (TAA)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr5 45130360 45130383 -154499767 + AT_rich Low_complexity Low_complexity 1 23 0 365 259 103 17 chr5 45130383 45130499 -154499651 - MIR SINE MIR -66 196 71 239 152 22 0 chr5 45130716 45130762 -154499388 + L2 LINE L2 3226 3272 0 7611 25 16 2 chr5 45131126 45132301 -154497849 - L1PA3 LINE L1 0 6155 4972 4777 63 23 1 chr5 45135474 45136172 -154493978 - L1P LINE L1 -1017 5129 4417 4527 31 2 0 chr5 45136172 45136744 -154493406 + L1P LINE L1 3842 4414 -1732 386 254 112 6 chr5 45136756 45136925 -154493225 - L1ME4a LINE L1 -266 5855 5669 1220 98 0 0 chr5 45138034 45138207 -154491943 - MER51B LTR ERV1 -157 220 48 472 134 0 82 chr5 45138196 45138293 -154491857 - MER51A LTR ERV1 -545 89 1 * 1031 223 72 36 chr5 45138295 45138608 -154491542 + MLT1C LTR MaLR 132 379 -11 4157 134 20 33 chr5 45139079 45139815 -154490335 - LTR8A LTR ERV1 0 727 1 718 246 28 17 chr5 45140603 45140782 -154489368 + MER5A DNA MER1_type 9 189 0 623 251 0 59 chr5 45141130 45141349 -154488801 + L2 LINE L2 3103 3308 -5 206 32 32 0 chr5 45142112 45142143 -154488007 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr5 45142396 45142419 -154487731 + AT_rich Low_complexity Low_complexity 1 23 0 634 290 54 9 chr5 45142451 45142672 -154487478 - MIR SINE MIR -12 250 20 1868 177 3 0 chr5 45143215 45143514 -154486636 - AluJo SINE Alu -12 300 1 3783 122 9 40 chr5 45143526 45144157 -154485993 - L1PA15 LINE L1 0 6165 5554 546 281 72 48 chr5 45146866 45147325 -154482825 + L1ME4a LINE L1 5457 5926 -195 305 204 131 36 chr5 45147959 45148096 -154482054 + L1ME4a LINE L1 5956 6105 -16 1453 310 87 62 chr5 45149234 45149554 -154480596 - L2 LINE L2 -1 3271 2960 2140 122 3 3 chr5 45149554 45149849 -154480301 + AluSg SINE Alu 1 295 -15 1453 310 87 62 chr5 45149849 45150862 -154479288 - L2 LINE L2 -312 2960 1888 226 250 0 18 chr5 45150959 45150998 -154479152 + GA-rich Low_complexity Low_complexity 1 40 -15 204 40 0 0 chr5 45150998 45151023 -154479127 + (GGAGA)n Simple_repeat Simple_repeat 4 28 0 226 250 0 18 chr5 45151023 45151039 -154479111 + GA-rich Low_complexity Low_complexity 40 55 0 207 239 98 22 chr5 45151142 45151234 -154478916 - L2 LINE L2 -204 3068 2970 1415 166 6 131 chr5 45154358 45154702 -154475448 + AluJb SINE Alu 2 302 0 732 235 83 51 chr5 45156358 45156575 -154473575 - MER58A DNA MER1_type 0 224 1 761 271 59 0 chr5 45156588 45156758 -154473392 + MER5A DNA MER1_type 6 185 -4 331 309 10 0 chr5 45157748 45157845 -154472305 + (TA)n Simple_repeat Simple_repeat 2 99 0 188 317 0 0 chr5 45158321 45158381 -154471769 + MIR SINE MIR 166 225 -37 493 286 18 13 chr5 45158841 45158986 -154471164 - MIR SINE MIR -62 146 26 220 226 157 59 chr5 45161012 45161114 -154469036 - MIR SINE MIR -2 260 149 197 184 0 26 chr5 45161564 45161602 -154468548 - MIR SINE MIR -77 185 149 463 265 30 24 chr5 45162510 45162676 -154467474 + Charlie7 DNA MER1_type 370 536 -2076 2167 123 0 3 chr5 45162743 45163043 -154467107 - AluSg SINE Alu -11 299 1 222 222 0 0 chr5 45163521 45163575 -154466575 + GA-rich Low_complexity Low_complexity 3 56 0 1791 271 126 18 chr5 45164261 45165032 -154465118 - L1ME3A LINE L1 -4 6166 5313 445 376 96 0 chr5 45165093 45165311 -154464839 - MIR SINE MIR 0 262 24 858 182 10 0 chr5 45165790 45165943 -154464207 + MIR SINE MIR 104 257 -5 298 297 245 19 chr5 45165966 45166121 -154464029 - L2 LINE L2 0 3313 3124 264 290 0 10 chr5 45166349 45166449 -154463701 - HAL1b LINE L1 -600 748 650 22 56 0 0 chr5 45166465 45166501 -154463649 + AT_rich Low_complexity Low_complexity 1 36 0 7846 138 22 2 chr5 45167004 45168276 -154461874 + HSMAR2 DNA Mariner 5 1301 -1 276 130 0 0 chr5 45168735 45168781 -154461369 + (CA)n Simple_repeat Simple_repeat 2 47 0 2043 142 132 5 chr5 45168932 45169312 -154460838 - MSTA LTR MaLR 0 428 1 225 235 25 92 chr5 45169375 45169494 -154460656 - HAL1b LINE L1 -696 652 542 375 300 40 40 chr5 45169512 45169662 -154460488 - HAL1b LINE L1 -1104 244 95 32 26 0 0 chr5 45169715 45169754 -154460396 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr5 45169766 45169789 -154460361 + AT_rich Low_complexity Low_complexity 1 23 0 219 217 87 0 chr5 45170133 45170202 -154459948 + L2 LINE L2 3133 3207 -106 322 338 83 51 chr5 45170464 45170778 -154459372 - L2 LINE L2 -633 2681 2358 292 229 104 10 chr5 45170910 45171006 -154459144 - L2 LINE L2 -966 2348 2244 245 354 129 36 chr5 45172267 45172793 -154457357 + L2 LINE L2 121 695 -2619 915 119 4 183 chr5 45174471 45174706 -154455444 - 7SK RNA RNA 0 193 1 197 128 0 26 chr5 45174787 45174826 -154455324 + (TATG)n Simple_repeat Simple_repeat 1 38 0 239 336 42 17 chr5 45176584 45176703 -154453447 + MIR3 SINE MIR 81 202 -6 353 235 0 0 chr5 45177224 45177292 -154452858 - L2 LINE L2 -56 3257 3190 2514 62 0 24 chr5 45227784 45228122 -154402028 + L1PA5 LINE L1 5821 6150 -4 2134 132 0 0 chr5 45228879 45229183 -154400967 - AluSg1 SINE Alu -4 305 2 806 220 50 0 chr5 45230102 45230261 -154399889 - MER45A DNA AcHobo -11 167 1 306 306 31 0 chr5 45231959 45232057 -154398093 - MIR3 SINE MIR -5 203 103 531 289 53 0 chr5 45232406 45232563 -154397587 + MIR SINE MIR 96 259 -3 2273 84 0 0 chr5 45232874 45233159 -154396991 - AluY SINE Alu -1 310 26 40215 71 6 9 chr5 45233475 45239217 -154390933 + L1P2 LINE L1 12 5756 -398 238 251 192 2 chr5 45240678 45240765 -154389385 - MIR SINE MIR -103 105 2 759 233 41 6 chr5 45241360 45241532 -154388618 + MER58A DNA MER1_type 35 212 -12 220 328 64 80 chr5 45242822 45243300 -154386850 + L2 LINE L2 2461 2926 -346 284 260 110 0 chr5 45244288 45244361 -154385789 - L2 LINE L2 -1 3271 3191 355 254 45 60 chr5 45244592 45244726 -154385424 - L2 LINE L2 -40 3273 3142 25 0 0 0 chr5 45246776 45246801 -154383349 + AT_rich Low_complexity Low_complexity 1 25 0 685 196 7 0 chr5 45246802 45246940 -154383210 - L1M4 LINE L1 -696 5488 5350 1104 158 99 10 chr5 45246962 45247164 -154382986 - L1PA16 LINE L1 -9 6157 5938 300 312 11 91 chr5 45247242 45247428 -154382722 - HAL1 LINE L1 -2 2505 2335 3108 184 115 58 chr5 45247533 45248130 -154382020 + MER106B DNA MER1_type 2 680 -379 2276 106 0 3 chr5 45248130 45248433 -154381717 + AluSx SINE Alu 7 308 -4 3108 184 115 58 chr5 45248433 45248825 -154381325 + MER106B DNA MER1_type 680 1048 -11 550 247 75 39 chr5 45249956 45250235 -154379915 - L1MC4 LINE L1 -243 7799 7511 869 105 44 77 chr5 45250277 45250458 -154379692 - L1MA8 LINE L1 -2 6289 6115 4280 162 30 17 chr5 45250472 45251311 -154378839 - L1MB8 LINE L1 -6 6408 5559 5456 34 1 1 chr5 45251311 45251962 -154378188 - L1PA4 LINE L1 -4 6151 5501 5174 39 2 0 chr5 45251962 45252737 -154377413 + L1P2 LINE L1 4761 5538 -617 3249 153 3 12 chr5 45252720 45253284 -154376866 - L1MA8 LINE L1 -166 6125 5567 * 7343 165 19 83 chr5 45253385 45255214 -154374936 - L1MB8 LINE L1 -816 5566 3855 866 117 15 29 chr5 45255214 45255351 -154374799 + AluSg/x SINE Alu 162 296 -14 2650 227 68 67 chr5 45255352 45256086 -154374064 - L1MB8 LINE L1 -2943 3439 2690 4082 165 82 59 chr5 45256086 45257129 -154373021 + MER11C LTR ERVK 1 1067 -4 2650 227 68 67 chr5 45257129 45257718 -154372432 - L1MB8 LINE L1 -3692 2690 2103 198 389 111 0 chr5 45259079 45259205 -154370945 + L2 LINE L2 3125 3264 -8 325 262 50 57 chr5 45259356 45259497 -154370653 + MIR SINE MIR 53 192 -70 261 75 0 0 chr5 45260561 45260601 -154369549 + (T)n Simple_repeat Simple_repeat 1 40 0 7828 16 0 0 chr5 45261301 45262634 -154367516 - L1PA2 LINE L1 -3 6152 4820 16811 29 0 0 chr5 45262634 45264654 -154365496 + L1PA2 LINE L1 2824 4843 -1303 667 205 149 96 chr5 45264863 45265185 -154364965 + MER63 DNA MER1_type 684 1022 -38 1690 118 40 139 chr5 45265193 45265322 -154364828 - L1MA4A LINE L1 -6 6297 6157 2103 125 3 3 chr5 45265322 45265634 -154364516 - AluSx SINE Alu 0 312 1 1690 118 40 139 chr5 45265634 45265928 -154364222 - L1MA4A LINE L1 -146 6157 5916 * 2882 129 75 2 chr5 45265918 45266408 -154363742 - L1M2 LINE L1 -4174 3035 2510 2281 252 94 82 chr5 45266403 45267510 -154362640 - L1M2 LINE L1 -5392 1817 686 * 240 276 0 17 chr5 45267540 45267598 -154362552 + MER63 DNA MER1_type 1005 1061 0 1989 135 16 32 chr5 45268352 45268729 -154361421 + THE1C LTR MaLR 1 371 -4 2236 172 35 53 chr5 45268974 45269525 -154360625 + L1MA7 LINE L1 5747 6287 -4 877 313 72 13 chr5 45269851 45270311 -154359839 + LTR16C LTR ERVL 1 487 -4 429 329 75 17 chr5 45270497 45270737 -154359413 - MIR SINE MIR -3 259 6 1347 239 19 63 chr5 45271024 45271468 -154358682 - L1M4 LINE L1 -2157 3989 3572 1807 127 35 0 chr5 45271468 45271727 -154358423 + AluSq SINE Alu 1 268 -45 1347 239 19 63 chr5 45271727 45271822 -154358328 - L1M4 LINE L1 -2574 3572 3474 816 257 30 48 chr5 45271815 45272195 -154357955 - L1 LINE L1 -2168 3978 3613 * 236 339 31 16 chr5 45272560 45272687 -154357463 - L1ME LINE L1 -5922 148 20 241 287 100 27 chr5 45272830 45272980 -154357170 + MLT1J LTR MaLR 348 508 -3 1264 191 25 110 chr5 45273389 45273708 -154356442 + L1 LINE L1 4125 4397 -1749 1942 81 0 4 chr5 45273708 45273955 -154356195 + AluY SINE Alu 54 299 -12 1264 191 25 110 chr5 45273955 45274079 -154356071 + L1 LINE L1 4397 4530 -1616 5198 132 49 0 chr5 45274081 45275517 -154354633 + L1PA16 LINE L1 4657 6157 -9 253 313 28 50 chr5 45276435 45276614 -154353536 + MIR3 SINE MIR 33 207 -1 315 254 28 111 chr5 45276734 45277059 -154353091 + MLT1I LTR MaLR 116 549 0 206 291 47 12 chr5 45277213 45277299 -154352851 - MIR SINE MIR -109 153 65 227 283 75 25 chr5 45277445 45277565 -154352585 - LTR67 LTR ERVL -46 511 386 4832 118 108 22 chr5 45278479 45279287 -154350863 + MER4D LTR ERV1 1 877 -26 1479 295 41 23 chr5 45279417 45279932 -154350218 - L1MEc LINE L1 -5834 562 39 307 287 45 84 chr5 45280076 45280278 -154349872 + Tigger8 DNA MER2_type 462 655 -11 2341 92 0 16 chr5 45280339 45280645 -154349505 + AluY SINE Alu 1 301 -10 2137 112 10 0 chr5 45281300 45281594 -154348556 + AluSx SINE Alu 1 297 -15 2163 8 0 4 chr5 45282272 45282521 -154347629 - L1PA2 LINE L1 -263 5892 5645 1199 28 0 0 chr5 45282521 45282664 -154347486 + L1PA2 LINE L1 6013 6155 0 3175 143 30 6 chr5 45283245 45283785 -154346365 - L1PA15 LINE L1 0 6165 5613 706 306 86 17 chr5 45283853 45284144 -154346006 + L2 LINE L2 1400 1710 -1604 22 35 0 0 chr5 45284163 45284192 -154345958 + AT_rich Low_complexity Low_complexity 1 29 0 1907 121 63 30 chr5 45284876 45285239 -154344911 - THE1C LTR MaLR 0 375 1 224 30 30 0 chr5 45286473 45286506 -154343644 + (CA)n Simple_repeat Simple_repeat 2 35 0 2237 100 0 16 chr5 45286716 45287025 -154343125 + AluSp SINE Alu 6 309 -4 354 165 11 22 chr5 45288263 45288354 -154341796 + CT-rich Low_complexity Low_complexity 2 91 0 183 299 194 0 chr5 45291149 45291216 -154338934 + MER5B DNA MER1_type 56 135 -43 315 340 58 58 chr5 45292142 45292333 -154337817 + MIR3 SINE MIR 18 208 0 278 365 19 0 chr5 45292820 45292927 -154337223 + MIR3 SINE MIR 93 201 -7 184 305 122 15 chr5 45293130 45293261 -154336889 + L2 LINE L2 3165 3309 -4 1380 263 111 23 chr5 45293630 45294117 -154336033 + MLT1H1 LTR MaLR 26 555 0 263 385 101 44 chr5 45294607 45295015 -154335135 - L2 LINE L2 -4 3268 2838 463 160 9 57 chr5 45295951 45296057 -154334093 + FLAM_A SINE Alu 36 136 -6 525 296 13 7 chr5 45297734 45297886 -154332264 - MIR SINE MIR -10 252 100 273 356 23 23 chr5 45299005 45299137 -154331013 + MER5A DNA MER1_type 2 133 -56 1999 121 0 53 chr5 45299142 45299465 -154330685 - AluY SINE Alu -5 306 1 277 268 18 18 chr5 45299768 45299880 -154330270 - L1P LINE L1 -1131 5015 4904 232 287 89 10 chr5 45300172 45300273 -154329877 + L2 LINE L2 1913 2021 -1293 312 135 19 0 chr5 45300308 45300360 -154329790 - MLT1J2 LTR MaLR -48 402 350 619 276 92 0 chr5 45300429 45300614 -154329536 - MLT1J1 LTR MaLR -242 204 3 924 348 111 42 chr5 45300621 45301728 -154328422 + L2 LINE L2 2035 3210 -62 875 302 19 34 chr5 45302462 45302783 -154327367 + LTR16A LTR ERVL 109 424 -26 185 289 92 0 chr5 45304959 45305035 -154325115 + MIR SINE MIR 2 84 -178 1027 244 61 75 chr5 45305690 45306116 -154324034 - MLT1J LTR MaLR -23 488 69 2248 102 26 0 chr5 45306754 45307059 -154323091 - AluSp SINE Alu 0 313 1 1893 88 42 33 chr5 45307395 45307701 -154322449 + THE1C LTR MaLR 3 311 -64 324 0 0 0 chr5 45310077 45310113 -154320037 + (TG)n Simple_repeat Simple_repeat 2 37 0 292 378 63 0 chr5 45310793 45310920 -154319230 + L2 LINE L2 3136 3270 -2 2145 128 0 0 chr5 45313440 45313736 -154316414 - AluSx SINE Alu -16 296 1 250 323 83 23 chr5 45314474 45314607 -154315543 + L2 LINE L2 3173 3313 0 717 321 123 65 chr5 45315139 45316078 -154314072 + L2 LINE L2 2288 3272 0 4537 191 238 37 chr5 45316181 45317566 -154312584 - MER52A LTR ERV1 0 1755 1 635 168 71 0 chr5 45319584 45319697 -154310453 - FLAM_C SINE Alu -8 125 5 4476 278 99 10 chr5 45319934 45321467 -154308683 + L2 LINE L2 1307 2975 -339 652 274 125 40 chr5 45321921 45322250 -154307900 + L2 LINE L2 2953 3309 -4 377 321 19 27 chr5 45322920 45323110 -154307040 + MIR SINE MIR 23 210 -52 22 80 0 0 chr5 45323226 45323276 -154306874 + AT_rich Low_complexity Low_complexity 1 50 0 1446 235 93 88 chr5 45323549 45324205 -154305945 + LTR41 LTR ERVL 1 663 -110 3636 103 0 8 chr5 45324205 45324720 -154305430 - MER9 LTR ERVK 0 511 1 1446 235 93 88 chr5 45324720 45324817 -154305333 + LTR41 LTR ERVL 663 758 -15 23 68 0 0 chr5 45325170 45325214 -154304936 + AT_rich Low_complexity Low_complexity 1 44 0 494 204 0 0 chr5 45325440 45325528 -154304622 - Tigger7 DNA MER2_type -2 2585 2498 1437 171 32 14 chr5 45325530 45325952 -154304198 - Tigger7 DNA MER2_type -1966 521 5 1392 244 52 14 chr5 45325953 45326318 -154303832 + MLT1C LTR MaLR 86 464 -3 225 343 57 0 chr5 45326318 45326388 -154303762 - L2 LINE L2 -39 3233 3160 300 53 0 0 chr5 45326628 45326666 -154303484 + (CA)n Simple_repeat Simple_repeat 2 39 0 2048 143 39 20 chr5 45326822 45327179 -154302971 + THE1B LTR MaLR 1 364 0 238 273 8 16 chr5 45327641 45327763 -154302387 + L1MD3 LINE L1 7904 8042 0 446 253 76 89 chr5 45328191 45328416 -154301734 + MLT1K LTR MaLR 344 565 -23 1768 199 215 11 chr5 45328444 45328993 -154301157 + LTR65 LTR ERV1 1 661 -8 405 260 167 0 chr5 45329166 45329316 -154300834 + MER5A DNA MER1_type 9 183 -6 212 169 0 34 chr5 45329927 45329986 -154300164 + GA-rich Low_complexity Low_complexity 5 61 0 1693 163 0 42 chr5 45330005 45330311 -154299839 + AluJo SINE Alu 19 311 -1 261 83 0 0 chr5 45332901 45332937 -154297213 + (A)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr5 45333219 45333243 -154296907 + AT_rich Low_complexity Low_complexity 1 24 0 597 148 119 45 chr5 45334511 45334687 -154295463 + MER53 DNA DNA 1 189 0 198 0 0 0 chr5 45336682 45336704 -154293446 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr5 45337390 45337412 -154292738 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 45337631 45337654 -154292496 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr5 45337757 45337782 -154292368 + AT_rich Low_complexity Low_complexity 1 25 0 27 73 0 0 chr5 45338279 45338334 -154291816 + AT_rich Low_complexity Low_complexity 1 55 0 1069 112 0 11 chr5 45338855 45339034 -154291116 + (TTCC)n Simple_repeat Simple_repeat 2 178 0 294 328 69 23 chr5 45340428 45340559 -154289591 - L2 LINE L2 0 3272 3136 994 246 36 58 chr5 45340592 45340953 -154289197 - L2 LINE L2 -2 3311 2959 572 311 17 11 chr5 45340993 45341170 -154288980 - L2 LINE L2 -448 2866 2689 199 294 5 163 chr5 45341173 45341357 -154288793 - L2 LINE L2 -176 3096 2942 186 189 0 0 chr5 45341610 45341647 -154288503 + GA-rich Low_complexity Low_complexity 2 38 0 17029 166 50 15 chr5 45341766 45346790 -154283360 + L1MA1 LINE L1 15 4860 -2861 2528 46 0 13 chr5 45346790 45347093 -154283057 - AluY SINE Alu -12 299 1 17029 166 50 15 chr5 45347093 45348992 -154281158 + L1MA1 LINE L1 4860 7227 -494 2186 130 3 3 chr5 45348992 45349300 -154280850 + AluSc SINE Alu 1 308 -1 17029 166 50 15 chr5 45349300 45349814 -154280336 + L1MA1 LINE L1 7227 7721 0 889 361 107 12 chr5 45349826 45350518 -154279632 - L2 LINE L2 -553 2761 2004 669 186 83 0 chr5 45351724 45351869 -154278281 - MER106B DNA MER1_type -1 1058 902 2097 181 6 6 chr5 45352055 45352420 -154277730 - MLT1A1 LTR MaLR 0 365 1 239 217 0 0 chr5 45352449 45352495 -154277655 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 966 188 0 0 chr5 45354108 45354268 -154275882 - FRAM SINE Alu -16 160 1 443 255 268 0 chr5 45354388 45354541 -154275609 + MIR SINE MIR 32 225 -37 397 379 40 0 chr5 45355197 45355371 -154274779 + L2 LINE L2 2717 2897 -417 219 109 0 43 chr5 45355404 45355450 -154274700 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 561 240 104 0 chr5 45355614 45355739 -154274411 + L2 LINE L2 3134 3271 -1 49 90 0 0 chr5 45356057 45356190 -154273960 + AT_rich Low_complexity Low_complexity 1 133 0 16992 34 2 0 chr5 45356483 45359381 -154270769 + L1PA3 LINE L1 3228 6167 0 189 83 0 28 chr5 45359381 45359417 -154270733 + (TAAAA)n Simple_repeat Simple_repeat 1 45 0 243 0 0 0 chr5 45359422 45359449 -154270701 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 351 343 0 10 chr5 45360274 45360373 -154269777 - L2 LINE L2 -3 3310 3213 261 281 146 0 chr5 45361983 45362072 -154268078 - L2 LINE L2 -2 3270 3169 467 305 90 0 chr5 45362357 45362524 -154267626 + MIR SINE MIR 20 201 -61 310 250 14 0 chr5 45362536 45362608 -154267542 + MIR SINE MIR 4 76 -186 1178 272 98 24 chr5 45362833 45363251 -154266899 + LTR16A LTR ERVL 1 448 -2 591 286 119 35 chr5 45364945 45365288 -154264862 - L3 LINE CR1 -240 1337 966 23 0 0 0 chr5 45371093 45371116 -154259034 + AT_rich Low_complexity Low_complexity 1 23 0 365 289 97 9 chr5 45371140 45371254 -154258896 - L2 LINE L2 -2 3270 3147 372 328 38 0 chr5 45371552 45371683 -154258467 - MIR3 SINE MIR -23 185 50 315 0 0 0 chr5 45371982 45372017 -154258133 + (CA)n Simple_repeat Simple_repeat 2 36 0 2345 96 0 3 chr5 45372164 45372477 -154257673 - AluSx SINE Alu 0 312 1 1712 150 50 47 chr5 45372477 45372848 -154257302 - L1MC2 LINE L1 -27 6317 5943 32 0 0 0 chr5 45372864 45372896 -154257254 + AT_rich Low_complexity Low_complexity 1 32 0 534 115 0 88 chr5 45372897 45373010 -154257140 - L1MB3 LINE L1 -28 6155 6053 * 2625 156 49 30 chr5 45372993 45373519 -154256631 - L1MC2 LINE L1 -384 5960 5425 291 28 0 0 chr5 45374931 45374967 -154255183 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 22 94 0 0 chr5 45377328 45377392 -154252758 + AT_rich Low_complexity Low_complexity 1 64 0 316 263 71 20 chr5 45377624 45377723 -154252427 + L2 LINE L2 3139 3242 -30 342 287 158 24 chr5 45377831 45377995 -154252155 + MIR3 SINE MIR 16 201 -7 263 344 46 58 chr5 45378468 45378727 -154251423 + L2 LINE L2 2807 3062 -210 184 341 45 11 chr5 45378728 45378816 -154251334 + L2 LINE L2 3163 3253 -19 2338 68 0 29 chr5 45379390 45379697 -154250453 - AluY SINE Alu -13 298 1 704 250 0 38 chr5 45379830 45380014 -154250136 - L2 LINE L2 -1 3312 3136 197 329 51 101 chr5 45380109 45380267 -154249883 + L2 LINE L2 3078 3227 -45 * 490 338 76 59 chr5 45380266 45380896 -154249254 + L2 LINE L2 1987 2627 -687 313 337 29 77 chr5 45380983 45381229 -154248921 + L2 LINE L2 2616 2849 -465 1891 116 0 4 chr5 45382315 45382583 -154247567 + AluSq SINE Alu 39 305 -8 705 280 64 4 chr5 45384355 45384591 -154245559 - MIR SINE MIR 0 262 13 2489 96 8 3 chr5 45384606 45384960 -154245190 - L1PB1 LINE L1 -1 6150 5795 5110 200 22 9 chr5 45384965 45386075 -154244075 - L1 LINE L1 -1947 4199 3076 7201 101 19 17 chr5 45386077 45387650 -154242500 - L1PBa LINE L1 -4512 2351 634 976 211 5 0 chr5 45387650 45387849 -154242301 - L1PBa LINE L1 -6663 200 1 452 356 35 11 chr5 45388603 45388813 -154241337 + MIR SINE MIR 8 220 -42 296 255 47 47 chr5 45389362 45389468 -154240682 - MIR SINE MIR -56 152 47 196 260 260 10 chr5 45389531 45389627 -154240523 + L2 LINE L2 3137 3256 -16 23 0 0 0 chr5 45389662 45389685 -154240465 + AT_rich Low_complexity Low_complexity 1 23 0 248 289 31 41 chr5 45390093 45390190 -154239960 + MARNA DNA Mariner 447 542 -44 1048 168 28 0 chr5 45390390 45390569 -154239581 + MER20 DNA MER1_type 36 219 0 360 0 0 0 chr5 45392205 45392245 -154237905 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1841 56 9 0 chr5 45392245 45392478 -154237672 - L1PA5 LINE L1 -12 6142 5908 221 250 18 0 chr5 45392869 45392925 -154237225 + (CA)n Simple_repeat Simple_repeat 2 58 0 5922 97 11 10 chr5 45392938 45394300 -154235850 - L1PA10 LINE L1 0 6168 4784 4172 124 0 94 chr5 45394305 45395113 -154235037 - L1PA10 LINE L1 -1548 4598 3867 1766 160 7 0 chr5 45395780 45396068 -154234082 - AluSx SINE Alu -22 290 1 595 186 17 0 chr5 45397569 45397687 -154232463 + MER90 LTR ERV1 2 121 -454 * 1433 234 45 9 chr5 45397686 45398023 -154232127 + MER90 LTR ERV1 266 614 0 203 229 82 66 chr5 45398443 45398504 -154231646 - MIR3 SINE MIR -39 169 108 198 0 0 0 chr5 45398566 45398588 -154231562 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 459 0 0 0 chr5 45398587 45398638 -154231512 + (CA)n Simple_repeat Simple_repeat 1 51 0 2228 227 79 60 chr5 45398953 45399050 -154231100 + MER72 LTR ERV1 1 95 -627 1865 150 0 0 chr5 45399050 45399316 -154230834 + AluSx SINE Alu 1 266 -46 197 0 71 0 chr5 45399323 45399351 -154230799 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2228 227 79 60 chr5 45399351 45399951 -154230199 + MER72 LTR ERV1 100 720 -2 186 143 0 0 chr5 45399968 45400003 -154230147 + (TTC)n Simple_repeat Simple_repeat 2 36 0 302 271 27 43 chr5 45400495 45400633 -154229517 + MER5A DNA MER1_type 44 172 -6 242 314 88 0 chr5 45400702 45400804 -154229346 + MIR SINE MIR 48 158 -104 253 291 13 0 chr5 45400813 45400892 -154229258 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 327 130 0 0 chr5 45401426 45401480 -154228670 + (GA)n Simple_repeat Simple_repeat 2 55 0 436 257 9 26 chr5 45401702 45401815 -154228335 + MIR SINE MIR 31 141 -67 432 294 44 40 chr5 45402117 45402344 -154227806 + MIR SINE MIR 25 247 -15 421 364 48 10 chr5 45403399 45403608 -154226542 + MIR SINE MIR 46 262 0 298 327 10 10 chr5 45404130 45404231 -154225919 - MIR3 SINE MIR 0 208 108 313 289 7 60 chr5 45404932 45405081 -154225069 + MER103 DNA DNA 16 156 -10 2044 201 56 2 chr5 45407581 45408024 -154222126 + MLT1C LTR MaLR 1 467 0 224 254 15 0 chr5 45410170 45410237 -154219913 + (TA)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr5 45410739 45410760 -154219390 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 45410976 45411005 -154219145 + AT_rich Low_complexity Low_complexity 1 29 0 1196 247 188 27 chr5 45411868 45412379 -154217771 + MLT1E LTR MaLR 1 593 0 777 180 212 14 chr5 45412745 45412962 -154217188 + MLT1E1 LTR MaLR 1 260 -394 1138 229 41 11 chr5 45413473 45413740 -154216410 + MLT1E1 LTR MaLR 380 654 0 234 353 188 23 chr5 45414037 45414170 -154215980 - L2 LINE L2 -6 3266 3112 194 379 21 0 chr5 45414428 45414523 -154215627 - L2 LINE L2 -78 3235 3139 295 160 0 0 chr5 45414529 45414579 -154215571 - L2 LINE L2 -1 3271 3222 925 294 141 30 chr5 45414593 45415216 -154214934 + Charlie7 DNA MER1_type 34 725 -1887 30 45 0 0 chr5 45415252 45415296 -154214854 + AT_rich Low_complexity Low_complexity 1 44 0 2737 232 28 28 chr5 45416144 45416921 -154213229 - L1ME1 LINE L1 -6 6229 5453 19401 172 25 20 chr5 45416941 45419937 -154210213 + L1MA1 LINE L1 23 3003 -4718 2212 93 6 38 chr5 45419937 45420250 -154209900 + AluY SINE Alu 1 303 -8 19401 172 25 20 chr5 45420250 45422440 -154207710 + L1MA1 LINE L1 3003 5181 -2540 1968 144 123 26 chr5 45422440 45422830 -154207320 + MSTA LTR MaLR 1 428 0 8631 158 13 40 chr5 45422832 45424452 -154205698 + MSTA-int LTR MaLR 3 1578 -2 1969 167 132 0 chr5 45424454 45424832 -154205318 + MSTA LTR MaLR 1 428 0 19401 172 25 20 chr5 45424832 45427296 -154202854 + L1MA1 LINE L1 5181 7717 -4 1440 260 135 4 chr5 45427332 45427886 -154202264 - L1ME1 LINE L1 -763 5452 4826 233 271 17 0 chr5 45427887 45427946 -154202204 + MLT1F LTR MaLR 1 60 -482 2951 255 101 13 chr5 45427958 45429459 -154200691 - L1ME1 LINE L1 -2534 3681 2086 326 195 26 0 chr5 45429614 45429691 -154200459 - L1MC4 LINE L1 -3 8039 7961 4480 10 0 0 chr5 45429706 45430217 -154199933 - L1HS LINE L1 0 6155 5645 188 389 36 14 chr5 45430456 45430595 -154199555 + MIR SINE MIR 49 190 -72 210 37 0 0 chr5 45432073 45432100 -154198050 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 311 304 135 75 chr5 45432369 45432872 -154197278 + L2 LINE L2 1968 2500 -814 198 256 0 0 chr5 45434544 45434587 -154195563 - MER5A DNA MER1_type -137 52 10 253 259 0 0 chr5 45434699 45434753 -154195397 + (CA)n Simple_repeat Simple_repeat 2 55 0 1040 335 26 28 chr5 45435615 45436078 -154194072 + L2 LINE L2 2847 3308 -5 247 264 97 28 chr5 45436236 45436308 -154193842 + L2 LINE L2 3237 3313 0 2138 93 0 26 chr5 45436445 45436755 -154193395 - AluSc SINE Alu -4 305 4 58 0 0 0 chr5 45438027 45438085 -154192065 + AT_rich Low_complexity Low_complexity 1 58 0 245 289 24 0 chr5 45438154 45438237 -154191913 - L1MC4 LINE L1 -1341 6701 6617 182 351 0 39 chr5 45439607 45439684 -154190466 - L2 LINE L2 -12 3260 3187 295 315 65 25 chr5 45440091 45440291 -154189859 + L1MEd LINE L1 94 301 -5818 747 47 0 19 chr5 45440443 45440549 -154189601 - AluSp SINE Alu 0 313 210 703 117 10 0 chr5 45440539 45440642 -154189508 - AluSp SINE Alu -126 187 84 * 3104 176 30 2 chr5 45440833 45441368 -154188782 + MER44D DNA MER2_type 1 605 0 228 284 68 27 chr5 45441407 45441481 -154188669 - MIR SINE MIR -114 94 18 268 297 109 0 chr5 45441936 45442037 -154188113 - MIR3 SINE MIR -15 193 82 639 308 113 10 chr5 45442037 45442504 -154187646 - LTR33 LTR ERVL 0 521 1 21 57 0 0 chr5 45444392 45444427 -154185723 + AT_rich Low_complexity Low_complexity 1 35 0 706 243 115 43 chr5 45445884 45446119 -154184031 + MIR SINE MIR 10 261 -1 27 0 0 0 chr5 45446243 45446270 -154183880 + AT_rich Low_complexity Low_complexity 1 27 0 2403 71 0 0 chr5 45447646 45447956 -154182194 + AluY SINE Alu 1 310 -1 232 259 82 67 chr5 45448530 45448665 -154181485 + MIR SINE MIR 8 144 -118 358 306 45 33 chr5 45448670 45449421 -154180729 - L1MEd LINE L1 -1430 4699 3750 379 310 106 29 chr5 45449427 45449672 -154180478 - L1MEd LINE L1 -2549 3580 3317 720 32 0 0 chr5 45449887 45449980 -154180170 + AluS SINE Alu 1 93 -219 1684 136 54 30 chr5 45450029 45450361 -154179789 - L1MA9 LINE L1 0 6312 5973 595 298 104 47 chr5 45450379 45450485 -154179665 - L1MEd LINE L1 -3040 3089 2990 2327 69 14 0 chr5 45450485 45450774 -154179376 + AluSp SINE Alu 1 293 -20 595 298 104 47 chr5 45450774 45451497 -154178653 - L1MEd LINE L1 -3139 2990 2213 6097 139 40 3 chr5 45451540 45452530 -154177620 - L1MC1 LINE L1 -6 6327 5301 21 36 0 0 chr5 45452535 45452563 -154177587 + AT_rich Low_complexity Low_complexity 1 28 0 634 275 115 26 chr5 45452975 45453617 -154176533 - L1MEd LINE L1 -4500 1629 943 2700 153 23 40 chr5 45453961 45454517 -154175633 + L1MA7 LINE L1 5743 6289 -2 381 22 0 0 chr5 45455544 45455590 -154174560 + (A)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr5 45455851 45455873 -154174277 + AT_rich Low_complexity Low_complexity 1 22 0 585 362 107 43 chr5 45456252 45456815 -154173335 - L1MEd LINE L1 -5461 658 60 1760 112 89 104 chr5 45456815 45457209 -154172941 + MLT1B LTR MaLR 1 388 -2 231 269 0 0 chr5 45457916 45457968 -154172182 + GA-rich Low_complexity Low_complexity 3 54 0 225 275 14 0 chr5 45458223 45458292 -154171858 + GA-rich Low_complexity Low_complexity 1 70 0 225 275 14 0 chr5 45458711 45458780 -154171370 + GA-rich Low_complexity Low_complexity 1 70 0 24 32 0 0 chr5 45458921 45458952 -154171198 + AT_rich Low_complexity Low_complexity 1 31 0 819 261 20 0 chr5 45459081 45459280 -154170870 + MIR SINE MIR 49 251 -11 456 293 102 0 chr5 45462193 45462398 -154167752 + MIR SINE MIR 33 258 -4 198 129 0 0 chr5 45463269 45463300 -154166850 + MIR SINE MIR 84 114 -94 * 337 258 108 0 chr5 45463298 45463391 -154166759 - L2 LINE L2 -2 3311 3209 244 375 0 10 chr5 45463489 45463585 -154166565 - MER91A DNA MER1_type -82 114 20 333 317 60 57 chr5 45464032 45464385 -154165765 - L1ME4a LINE L1 -73 6048 5695 280 224 55 121 chr5 45464499 45464664 -154165486 + MIR SINE MIR 1 154 -54 434 279 49 0 chr5 45465328 45465450 -154164700 + MIR SINE MIR 7 134 -128 472 331 54 54 chr5 45466490 45466905 -154163245 - L2 LINE L2 -257 3056 2629 407 241 128 14 chr5 45466918 45467059 -154163091 + MLT1J2 LTR MaLR 1 157 -293 2529 143 2 12 chr5 45467335 45467735 -154162415 + MER61B LTR ERV1 1 396 -29 946 243 106 84 chr5 45468289 45468787 -154161363 + MLT1J LTR MaLR 1 509 -2 651 266 14 138 chr5 45469121 45469250 -154160900 + MIR SINE MIR 8 83 -179 2442 90 0 0 chr5 45469250 45469561 -154160589 - AluSx SINE Alu 0 312 2 651 266 14 138 chr5 45469561 45469721 -154160429 + MIR SINE MIR 83 261 -1 310 255 19 38 chr5 45471488 45471594 -154158556 + MIR SINE MIR 107 210 -52 314 168 64 24 chr5 45472049 45472164 -154157986 + (TA)n Simple_repeat Simple_repeat 2 124 -7 1799 156 51 12 chr5 45472164 45472498 -154157652 + MER7A DNA MER2_type 2 346 0 314 168 64 24 chr5 45472498 45472507 -154157643 + (TA)n Simple_repeat Simple_repeat 124 131 0 478 222 0 17 chr5 45474737 45474854 -154155296 - L1 LINE L1 -990 5156 5042 2359 57 37 3 chr5 45474932 45475231 -154154919 + AluY SINE Alu 1 309 -2 221 290 138 28 chr5 45475579 45475724 -154154426 - MIR SINE MIR -56 206 46 983 286 37 0 chr5 45478513 45478797 -154151353 - LTR16C LTR ERVL -3 473 194 1979 134 19 8 chr5 45481900 45482266 -154147884 - L1MA8 LINE L1 0 6291 5922 410 289 66 57 chr5 45482510 45482721 -154147429 + MIR SINE MIR 37 249 -13 1628 226 45 54 chr5 45483129 45483278 -154146872 + MLT1C LTR MaLR 6 155 -312 1901 193 11 3 chr5 45483278 45483636 -154146514 - MLT1A1 LTR MaLR 0 365 5 1628 226 45 54 chr5 45483636 45483827 -154146323 + MLT1C LTR MaLR 155 343 -124 2132 137 13 24 chr5 45483827 45484206 -154145944 - THE1C LTR MaLR 0 375 1 1628 226 45 54 chr5 45484206 45484328 -154145822 + MLT1C LTR MaLR 343 465 -2 305 349 38 0 chr5 45485117 45485249 -154144901 - L2 LINE L2 -208 3105 2969 1993 171 0 46 chr5 45485598 45485966 -154144184 + MLT1A1 LTR MaLR 14 364 -1 376 268 12 0 chr5 45487546 45487628 -154142522 - L2 LINE L2 -5 3308 3226 191 313 0 0 chr5 45488886 45488934 -154141216 - L2 LINE L2 -11 3261 3214 417 306 192 24 chr5 45491383 45491680 -154138470 - L2 LINE L2 -978 2336 1990 1073 118 7 0 chr5 45491686 45491839 -154138311 + AluSp/q SINE Alu 158 311 -2 296 286 107 51 chr5 45491848 45492026 -154138124 - L2 LINE L2 -1334 1980 1793 1761 192 28 11 chr5 45492202 45492561 -154137589 - MLT1A1 LTR MaLR 0 365 1 1069 50 0 21 chr5 45493482 45493622 -154136528 + L1PA7 LINE L1 6018 6154 0 580 265 136 15 chr5 45493702 45494026 -154136124 - L1MEd LINE L1 -4886 1233 871 297 0 0 0 chr5 45494378 45494411 -154135739 + (T)n Simple_repeat Simple_repeat 1 33 0 9471 182 20 18 chr5 45495439 45497036 -154133114 - L1MA7 LINE L1 -2 6289 4680 2130 136 13 0 chr5 45497036 45497344 -154132806 - AluSq SINE Alu -1 312 1 9471 182 20 18 chr5 45497344 45498696 -154131454 - L1MA7 LINE L1 -1611 4680 3333 510 343 102 69 chr5 45499143 45499811 -154130339 + HAL1 LINE L1 12 701 -1806 519 252 60 15 chr5 45499937 45500136 -154130014 - MER31B LTR ERV1 0 543 259 2232 190 53 24 chr5 45500136 45500605 -154129545 + L1M1 LINE L1 24 506 -7059 1314 123 9 4 chr5 45500581 45500809 -154129341 + L1M1 LINE L1 2967 3195 -4370 * 514 187 24 0 chr5 45500809 45500932 -154129218 + CT-rich Low_complexity Low_complexity 1 126 0 22 0 0 0 chr5 45501910 45501932 -154128218 + AT_rich Low_complexity Low_complexity 1 22 0 253 158 35 0 chr5 45502328 45502370 -154127780 - HSMAR1 DNA Mariner 0 1287 1241 189 0 0 0 chr5 45502370 45502391 -154127759 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 253 158 35 0 chr5 45502391 45502405 -154127745 - HSMAR1 DNA Mariner -46 1241 1229 1736 83 91 51 chr5 45502405 45502681 -154127469 - AluY SINE Alu -24 287 1 388 138 0 31 chr5 45502910 45502975 -154127175 - LTR3b LTR ERVK 0 500 438 1835 175 47 44 chr5 45502975 45503403 -154126747 - LTR3 LTR ERVK 0 429 1 285 163 0 0 chr5 45503418 45503467 -154126683 - HERVK14 LTR ERVK -61 5884 5836 * 2140 193 17 10 chr5 45503458 45503868 -154126282 - HERVK3 LTR ERVK -4967 2276 1864 303 111 0 111 chr5 45503868 45503931 -154126219 - HERVK3 LTR ERVK -5867 1376 1321 * 402 260 0 29 chr5 45503919 45504023 -154126127 - HERVK3 LTR ERVK -6563 680 580 769 199 92 15 chr5 45504089 45504285 -154125865 - HERVK3 LTR ERVK -6978 265 55 431 151 123 0 chr5 45504594 45504667 -154125483 - LTR3b LTR ERVK 0 500 419 2059 122 14 3 chr5 45504676 45504972 -154125178 - LTR3b LTR ERVK -17 483 185 400 169 0 0 chr5 45505020 45505085 -154125065 - Tigger5 DNA MER2_type -2244 79 15 372 202 30 71 chr5 45505117 45505151 -154124999 - MIR SINE MIR -65 197 163 2817 209 16 5 chr5 45505151 45505707 -154124443 + MER68 LTR ERV1 1 562 0 372 202 30 71 chr5 45505707 45505771 -154124379 - MIR SINE MIR -99 163 103 289 263 0 25 chr5 45506055 45506135 -154124015 + MIR SINE MIR 74 151 -111 243 382 18 0 chr5 45506301 45506411 -154123739 + MIR SINE MIR 28 139 -123 21 0 0 0 chr5 45506599 45506620 -154123530 + AT_rich Low_complexity Low_complexity 1 21 0 1880 154 133 16 chr5 45507626 45508009 -154122141 - MSTA LTR MaLR 0 428 1 2328 172 7 7 chr5 45508009 45508452 -154121698 + L1MB3 LINE L1 5741 6183 0 345 47 0 0 chr5 45508636 45508679 -154121471 + (GA)n Simple_repeat Simple_repeat 1 43 0 2038 99 40 0 chr5 45509568 45509867 -154120283 + AluSx SINE Alu 1 310 0 261 139 0 0 chr5 45510032 45510075 -154120075 + (A)n Simple_repeat Simple_repeat 1 43 0 292 219 110 0 chr5 45510140 45510222 -154119928 + MIR SINE MIR 115 205 -57 184 307 158 39 chr5 45511095 45511222 -154118928 + L2 LINE L2 3172 3313 0 1549 154 48 6 chr5 45511697 45512009 -154118141 - L1MB2 LINE L1 0 6171 5847 308 344 23 23 chr5 45512255 45512386 -154117764 + MIR3 SINE MIR 11 141 -67 32 26 0 0 chr5 45512457 45512496 -154117654 + AT_rich Low_complexity Low_complexity 1 39 0 1010 125 6 6 chr5 45512502 45512670 -154117480 + L1MB3 LINE L1 6015 6182 -1 220 282 94 34 chr5 45512880 45512997 -154117153 - MIR SINE MIR -46 216 93 246 62 0 0 chr5 45513170 45513202 -154116948 + (CA)n Simple_repeat Simple_repeat 2 33 0 24 32 0 0 chr5 45513846 45513877 -154116273 + AT_rich Low_complexity Low_complexity 1 31 0 535 290 34 23 chr5 45513988 45514164 -154115986 - MIR SINE MIR -4 258 81 215 346 138 31 chr5 45514159 45514289 -154115861 - L3 LINE CR1 -8 1569 1426 * 581 366 28 16 chr5 45514491 45514813 -154115337 - L3 LINE CR1 -412 1165 840 386 305 105 21 chr5 45515660 45515850 -154114300 - MIR SINE MIR -11 251 46 549 298 174 26 chr5 45516371 45516797 -154113353 - L2 LINE L2 -11 3302 2814 27 0 0 0 chr5 45516824 45516851 -154113299 + AT_rich Low_complexity Low_complexity 1 27 0 44184 36 1 4 chr5 45516851 45523020 -154107130 - L1PA3 LINE L1 -3 6152 2 904 164 20 0 chr5 45523023 45523175 -154106975 - FRAM SINE Alu -5 171 17 1346 337 45 30 chr5 45523175 45523881 -154106269 - L2 LINE L2 -570 2744 2028 2641 265 95 67 chr5 45523884 45526176 -154103974 + L1MB1 LINE L1 1 1979 -3993 11745 202 41 19 chr5 45526208 45528910 -154101240 + L1MB1 LINE L1 2045 4857 -1135 2931 173 38 12 chr5 45528910 45529493 -154100657 + L1PB4 LINE L1 5547 6144 -12 11745 202 41 19 chr5 45529493 45530655 -154099495 + L1MB1 LINE L1 4857 5992 0 1285 301 94 16 chr5 45530661 45531289 -154098861 - L2 LINE L2 -1284 2030 1354 197 108 27 0 chr5 45531309 45531346 -154098804 + (TG)n Simple_repeat Simple_repeat 1 38 0 976 344 33 9 chr5 45531426 45531847 -154098303 - L2 LINE L2 -1913 1401 971 318 87 0 0 chr5 45532903 45532949 -154097201 + (TG)n Simple_repeat Simple_repeat 1 46 0 249 83 0 0 chr5 45534146 45534182 -154095968 + (TG)n Simple_repeat Simple_repeat 1 36 0 412 269 119 25 chr5 45534947 45535107 -154095043 - MER5A DNA MER1_type -6 183 9 349 278 8 53 chr5 45537399 45537532 -154092618 + MIR SINE MIR 95 221 -41 205 175 0 0 chr5 45538092 45538132 -154092018 + T-rich Low_complexity Low_complexity 2 41 0 274 272 81 36 chr5 45541214 45541373 -154088777 + MIR SINE MIR 35 203 -59 286 338 26 52 chr5 45541823 45541902 -154088248 + MIR3 SINE MIR 54 129 -79 2706 171 2 11 chr5 45541902 45542370 -154087780 - MLT2C2 LTR ERVL 0 464 1 286 338 26 52 chr5 45542370 45542444 -154087706 + MIR3 SINE MIR 129 203 -5 2110 70 0 4 chr5 45542525 45542784 -154087366 - AluY SINE Alu -53 258 1 24 32 0 0 chr5 45543384 45543415 -154086735 + AT_rich Low_complexity Low_complexity 1 31 0 208 279 82 74 chr5 45544015 45544137 -154086013 + L2 LINE L2 3166 3288 -25 220 221 211 29 chr5 45544154 45544258 -154085892 - L2 LINE L2 0 3313 3191 2838 158 14 0 chr5 45544709 45545201 -154084949 + L1MB3 LINE L1 5685 6183 0 2162 229 43 25 chr5 45545293 45545848 -154084302 - MER90 LTR ERV1 -10 565 1 22 80 0 0 chr5 45546902 45546952 -154083198 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr5 45546965 45546986 -154083164 + AT_rich Low_complexity Low_complexity 1 21 0 508 236 88 28 chr5 45547217 45547399 -154082751 - L1MC5 LINE L1 -48 7913 7721 901 87 0 0 chr5 45547626 45547741 -154082409 - AluSq/x SINE Alu -198 115 1 1948 141 14 0 chr5 45549022 45549312 -154080838 + AluSx SINE Alu 3 296 -16 35 54 0 0 chr5 45550475 45550531 -154079619 + AT_rich Low_complexity Low_complexity 1 56 0 315 0 0 0 chr5 45552369 45552404 -154077746 + (TG)n Simple_repeat Simple_repeat 1 35 0 360 239 188 24 chr5 45552848 45553061 -154077089 - LTR50 LTR ERVL -20 775 528 816 240 149 8 chr5 45553182 45553424 -154076726 - LTR50 LTR ERVL -517 278 3 2019 187 38 115 chr5 45553426 45553956 -154076194 + MLT1D LTR MaLR 1 489 -16 728 196 13 0 chr5 45554053 45554211 -154075939 + L1ME2 LINE L1 5336 5495 -669 1976 105 7 4 chr5 45554211 45554487 -154075663 - AluSq SINE Alu -8 305 29 3521 143 36 25 chr5 45554587 45555228 -154074922 - MER4E LTR ERV1 -118 648 1 518 250 29 15 chr5 45555228 45555364 -154074786 + MLT1C LTR MaLR 287 424 -43 338 222 0 50 chr5 45555366 45555465 -154074685 + L1ME2 LINE L1 5837 5930 -234 525 317 108 8 chr5 45555466 45555711 -154074439 + MLT1H LTR MaLR 11 282 -267 4116 125 6 11 chr5 45555711 45556135 -154074015 + MER41B LTR ERV1 1 423 -212 2184 135 30 25 chr5 45556135 45556497 -154073653 + THE1B LTR MaLR 1 364 0 4116 125 6 11 chr5 45556497 45556702 -154073448 + MER41B LTR ERV1 423 627 -8 549 288 62 10 chr5 45556710 45556935 -154073215 + MLT1H LTR MaLR 278 546 -3 1863 165 36 43 chr5 45556974 45557367 -154072783 + L1MA8 LINE L1 4658 5047 -1099 2195 122 99 18 chr5 45557368 45557761 -154072389 + MER4B LTR ERV1 1 425 -185 273 111 22 0 chr5 45557761 45557806 -154072344 + MADE1 DNA Mariner 1 46 -34 263 95 0 0 chr5 45557893 45557935 -154072215 + MADE1 DNA Mariner 35 76 -4 1272 113 11 0 chr5 45557939 45558124 -154072026 + MER4B LTR ERV1 424 610 0 4754 147 13 12 chr5 45558124 45559139 -154071011 + L1MA8 LINE L1 5045 6062 -229 543 232 48 77 chr5 45559140 45559347 -154070803 + L1ME2 LINE L1 5961 6161 -3 702 192 187 5 chr5 45559383 45559581 -154070569 + MER31B LTR ERV1 225 458 -8 21 0 0 0 chr5 45561429 45561450 -154068700 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr5 45561487 45561513 -154068637 + AT_rich Low_complexity Low_complexity 1 26 0 19223 38 2 5 chr5 45562286 45565448 -154064702 - L1PA4 LINE L1 0 6155 2999 1427 166 78 51 chr5 45565616 45565830 -154064320 - MLT1A1 LTR MaLR 0 365 137 2312 115 0 0 chr5 45565830 45566134 -154064016 - AluY SINE Alu -7 304 1 1427 166 78 51 chr5 45566134 45566251 -154063899 - MLT1A1 LTR MaLR -228 137 25 191 204 0 41 chr5 45566257 45566306 -154063844 + MIR SINE MIR 94 140 -68 235 233 49 14 chr5 45567077 45567196 -154062954 + MIR SINE MIR 47 208 -54 625 185 25 49 chr5 45568379 45568541 -154061609 - L1PB4 LINE L1 -1 6155 5998 4979 223 30 131 chr5 45568691 45570882 -154059268 - L1PA15-16 LINE L1 -4469 2380 415 4441 154 22 19 chr5 45570892 45571721 -154058429 + L1PA16 LINE L1 5336 6166 0 272 183 28 28 chr5 45571730 45571801 -154058349 - L1PA15-16 LINE L1 -6503 346 276 2639 219 28 56 chr5 45571805 45572660 -154057490 - L1 LINE L1 -1490 4656 3826 237 315 212 0 chr5 45572660 45572825 -154057325 + MIR SINE MIR 61 260 -2 306 191 56 56 chr5 45573688 45573777 -154056373 - L2 LINE L2 -65 3248 3160 242 299 81 0 chr5 45573815 45573902 -154056248 - L2 LINE L2 -277 3036 2943 2350 88 0 31 chr5 45574867 45575187 -154054963 + AluY SINE Alu 1 310 -1 187 313 62 0 chr5 45575382 45575462 -154054688 - MIR SINE MIR -27 235 151 1810 277 89 58 chr5 45576285 45576387 -154053763 - L2 LINE L2 -98 3215 3118 1221 227 102 21 chr5 45576387 45576819 -154053331 - MLT1C LTR MaLR 0 467 1 1810 277 89 58 chr5 45576819 45577352 -154052798 - L2 LINE L2 -195 3118 2540 1595 190 10 20 chr5 45577352 45577652 -154052498 - AluJb SINE Alu -10 302 6 1810 277 89 58 chr5 45577652 45577928 -154052222 - L2 LINE L2 -773 2540 2274 3144 47 0 0 chr5 45578056 45578441 -154051709 + L1PA4 LINE L1 5764 6148 -7 25 0 0 0 chr5 45578441 45578466 -154051684 + AT_rich Low_complexity Low_complexity 1 25 0 4121 170 9 9 chr5 45578466 45579716 -154050434 + L1PA13 LINE L1 4507 5754 -411 5512 163 44 7 chr5 45579740 45579814 -154050336 + L1PA13 LINE L1 4148 4218 -1945 2000 143 3 0 chr5 45579814 45580100 -154050050 - AluSx SINE Alu -23 289 3 5512 163 44 7 chr5 45580100 45581330 -154048820 + L1PA13 LINE L1 4218 5543 -620 250 78 20 20 chr5 45581330 45581381 -154048769 + (TA)n Simple_repeat Simple_repeat 2 52 0 5512 163 44 7 chr5 45581381 45582001 -154048149 + L1PA13 LINE L1 5543 6138 -25 1006 148 92 0 chr5 45582001 45582197 -154047953 + L1PA13 LINE L1 5948 6161 -2 35 0 0 0 chr5 45582303 45582338 -154047812 + AT_rich Low_complexity Low_complexity 1 35 0 2169 181 46 2 chr5 45582515 45582925 -154047225 + MSTA LTR MaLR 1 428 0 221 304 185 0 chr5 45583769 45583861 -154046289 - MIR SINE MIR -64 144 36 379 292 44 0 chr5 45584077 45584190 -154045960 + MIR SINE MIR 37 154 -108 4069 171 56 29 chr5 45584220 45584399 -154045751 - L1MA7 LINE L1 -2 6289 6116 2345 53 0 27 chr5 45584399 45584699 -154045451 - AluY SINE Alu -19 292 1 4069 171 56 29 chr5 45584699 45585924 -154044226 - L1MA7 LINE L1 -175 6116 4848 2207 161 60 60 chr5 45585930 45586546 -154043604 + L1MA7 LINE L1 4219 4834 -1312 402 38 0 0 chr5 45586812 45586865 -154043285 - MADE1 DNA Mariner -27 53 1 199 277 31 31 chr5 45589197 45589262 -154040888 + MIR SINE MIR 77 141 -67 395 227 116 12 chr5 45589271 45589443 -154040707 + L1MB3 LINE L1 5987 6176 -7 314 271 75 0 chr5 45589461 45589568 -154040582 + MIR SINE MIR 148 262 0 304 274 43 43 chr5 45590193 45590310 -154039840 - MIR3 SINE MIR -6 202 86 * 1527 340 88 17 chr5 45590309 45591501 -154038649 + L2 LINE L2 882 2158 -1156 4059 32 4 12 chr5 45591507 45592002 -154038148 + L1PA4 LINE L1 5662 6152 -3 200 349 47 9 chr5 45592034 45592140 -154038010 + L2 LINE L2 2403 2512 -802 200 222 130 19 chr5 45592140 45592194 -154037956 - L2 LINE L2 0 3313 3254 2040 126 7 29 chr5 45592454 45592764 -154037386 - AluSc SINE Alu -6 303 1 222 264 19 19 chr5 45592793 45592899 -154037251 + T-rich Low_complexity Low_complexity 2 107 0 41274 47 2 1 chr5 45592902 45599049 -154031101 - L1PA3 LINE L1 -3 6152 1 1130 141 40 80 chr5 45599105 45599381 -154030769 - MLT2C2 LTR ERVL -199 265 1 1815 173 0 0 chr5 45601594 45601872 -154028278 + AluSx SINE Alu 1 278 -34 368 123 0 15 chr5 45601877 45601942 -154028208 + (GGAA)n Simple_repeat Simple_repeat 1 64 0 189 0 0 0 chr5 45602277 45602298 -154027852 + (AGATG)n Simple_repeat Simple_repeat 3 23 0 1342 241 60 42 chr5 45603378 45603830 -154026320 - MLT1C LTR MaLR -3 464 5 1306 220 0 20 chr5 45605418 45605718 -154024432 - MLT1A1 LTR MaLR 0 365 72 212 366 61 0 chr5 45605841 45605923 -154024227 - L2 LINE L2 -28 3285 3199 499 298 89 21 chr5 45608187 45608395 -154021755 + MIR SINE MIR 6 233 -29 308 311 31 52 chr5 45608395 45608588 -154021562 - MER5A DNA MER1_type 0 189 1 499 298 89 21 chr5 45608588 45608614 -154021536 + MIR SINE MIR 233 256 -6 245 305 0 0 chr5 45608836 45608895 -154021255 - L2 LINE L2 0 3313 3255 735 243 46 46 chr5 45608901 45609057 -154021093 + MER58A DNA MER1_type 6 164 -2256 1819 178 25 8 chr5 45609057 45609412 -154020738 - MLT1A1 LTR MaLR 0 365 5 735 243 46 46 chr5 45609412 45609473 -154020677 + MER58A DNA MER1_type 163 223 -1 226 195 0 65 chr5 45609736 45609813 -154020337 - LTR67 LTR ERVL -28 529 458 379 231 59 163 chr5 45610610 45610741 -154019409 - MIR SINE MIR -25 237 94 2374 106 0 0 chr5 45610741 45611043 -154019107 + AluSx SINE Alu 1 302 -10 379 231 59 163 chr5 45611043 45611060 -154019090 - MIR SINE MIR -168 94 77 2097 134 3 13 chr5 45611060 45611373 -154018777 + AluSq SINE Alu 1 310 -3 379 231 59 163 chr5 45611373 45611444 -154018706 - MIR SINE MIR -185 77 40 974 178 15 5 chr5 45611999 45612201 -154017949 - MER3 DNA MER1_type -5 204 1 255 336 25 34 chr5 45612216 45612335 -154017815 + MER5A DNA MER1_type 47 164 -25 255 326 143 0 chr5 45612774 45612872 -154017278 + L2 LINE L2 3187 3298 -15 662 294 49 46 chr5 45613692 45614042 -154016108 - LTR16A1 LTR ERVL 0 457 107 609 297 51 49 chr5 45614350 45614700 -154015450 - LTR16A1 LTR ERVL 0 457 107 1641 136 145 21 chr5 45615822 45616154 -154013996 - THE1C LTR MaLR 0 375 3 554 223 67 57 chr5 45617030 45617223 -154012927 + MER106A DNA MER1_type 37 231 -5 563 187 0 0 chr5 45617513 45617620 -154012530 + FRAM SINE Alu 70 176 0 590 261 208 13 chr5 45617848 45618265 -154011885 + LTR50 LTR ERVL 3 598 -197 274 161 36 0 chr5 45618323 45618379 -154011771 + LTR50 LTR ERVL 728 785 -10 1396 223 66 18 chr5 45618603 45619042 -154011108 + MLT1C LTR MaLR 8 467 0 459 304 61 17 chr5 45620233 45620414 -154009736 + MIR SINE MIR 49 237 -25 1143 274 25 38 chr5 45621382 45621780 -154008370 - L2 LINE L2 -831 2483 2091 469 378 101 16 chr5 45621809 45622322 -154007828 - L3 LINE CR1 -353 1224 668 1979 125 9 34 chr5 45622352 45622672 -154007478 - AluSx SINE Alu 0 312 1 34 24 0 0 chr5 45622809 45622850 -154007300 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr5 45623102 45623131 -154007019 + AT_rich Low_complexity Low_complexity 1 29 0 3447 29 0 2 chr5 45623588 45623998 -154006152 - L1PA4 LINE L1 -3 6152 5744 428 384 47 41 chr5 45624266 45624709 -154005441 + L1MEd LINE L1 356 801 -5404 496 266 79 26 chr5 45624842 45625184 -154004966 + L1MEd LINE L1 981 1340 -4865 1985 172 9 20 chr5 45625349 45625827 -154004323 + L1P3 LINE L1 6 786 -5675 474 18 0 0 chr5 45626061 45626116 -154004034 + (TG)n Simple_repeat Simple_repeat 2 56 0 2243 215 65 19 chr5 45626116 45626153 -154003997 - MLT2B3 LTR ERVL -3 551 517 474 14 57 0 chr5 45626153 45626223 -154003927 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 2243 215 65 19 chr5 45626223 45626503 -154003647 - MLT2B3 LTR ERVL -37 517 197 1801 165 7 0 chr5 45626503 45626837 -154003313 - AluSx SINE Alu 0 336 1 2243 215 65 19 chr5 45626837 45627043 -154003107 - MLT2B3 LTR ERVL -357 197 2 354 100 62 0 chr5 45627043 45627123 -154003027 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 1086 196 20 125 chr5 45627141 45627549 -154002601 - MLT2D LTR ERVL -48 366 2 453 287 31 36 chr5 45628002 45628197 -154001953 + L1MEd LINE L1 2103 2296 -4100 375 229 99 63 chr5 45628280 45628503 -154001647 + HAL1 LINE L1 2258 2488 -19 719 233 93 5 chr5 45629235 45629428 -154000722 - MER63A DNA MER1_type 0 210 1 490 272 60 32 chr5 45629543 45630077 -154000073 + L1MCc LINE L1 1126 1847 -4891 1455 224 47 0 chr5 45630136 45630458 -153999692 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 45630459 45630511 -153999639 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2520 53 20 0 chr5 45630557 45630859 -153999291 + AluY SINE Alu 1 308 -3 222 118 0 0 chr5 45630862 45630896 -153999254 + (TA)n Simple_repeat Simple_repeat 1 34 0 599 255 121 11 chr5 45631186 45631558 -153998592 + L1MCc LINE L1 2564 2976 -4146 2849 13 0 0 chr5 45632271 45632582 -153997568 + AluYb8 SINE Alu 1 311 -7 29122 53 2 2 chr5 45633098 45637756 -153992394 - L1PA5 LINE L1 0 6154 1495 4014 228 76 29 chr5 45648193 45649631 -153980519 + L1MCc LINE L1 3453 4958 -1983 660 349 63 42 chr5 45650243 45650621 -153979529 + L2 LINE L2 2887 3272 0 240 226 24 60 chr5 45650663 45650747 -153979403 - MIR3 SINE MIR -3 205 125 2669 110 22 3 chr5 45650854 45651238 -153978912 + MLT2A1 LTR ERVL 1 523 -31 468 0 0 0 chr5 45651238 45651290 -153978860 + (TA)n Simple_repeat Simple_repeat 2 53 0 2669 110 22 3 chr5 45651290 45651323 -153978827 + MLT2A1 LTR ERVL 523 554 0 2538 138 8 25 chr5 45651329 45651857 -153978293 + HERVL-A1 LTR ERVL 20 538 -5116 202 383 48 36 chr5 45652019 45652267 -153977883 + L2 LINE L2 1345 1595 -1719 1765 324 72 44 chr5 45652299 45653603 -153976547 + L2 LINE L2 1688 3021 -251 1240 146 67 4 chr5 45653793 45654033 -153976117 - MER2 DNA MER2_type 0 345 91 767 277 83 70 chr5 45654238 45654852 -153975298 - L2 LINE L2 0 3313 2717 282 331 184 31 chr5 45654863 45655244 -153974906 - L2 LINE L2 -2118 1196 758 22 56 0 0 chr5 45655269 45655305 -153974845 + AT_rich Low_complexity Low_complexity 1 36 0 183 364 33 66 chr5 45655642 45655793 -153974357 + MER5A DNA MER1_type 44 189 0 536 340 81 28 chr5 45655806 45656338 -153973812 + MLT1K LTR MaLR 3 562 -26 483 260 82 29 chr5 45658814 45659156 -153970994 + L1MEd LINE L1 981 1340 -4865 1978 169 9 23 chr5 45659321 45659800 -153970350 + L1P3 LINE L1 6 786 -5675 1481 218 41 67 chr5 45659996 45660034 -153970116 - MLT2B3 LTR ERVL 0 551 514 369 0 0 0 chr5 45660034 45660075 -153970075 + (TG)n Simple_repeat Simple_repeat 2 42 0 1481 218 41 67 chr5 45660075 45660112 -153970038 - MLT2B3 LTR ERVL -37 514 478 474 14 57 0 chr5 45660112 45660182 -153969968 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 1481 218 41 67 chr5 45660182 45660462 -153969688 - MLT2B3 LTR ERVL -73 478 237 1756 166 11 0 chr5 45660462 45660795 -153969355 - AluSx SINE Alu 0 336 1 1481 218 41 67 chr5 45660795 45660968 -153969182 - MLT2B3 LTR ERVL -314 237 61 327 104 65 0 chr5 45661051 45661128 -153969022 + (TCTA)n Simple_repeat Simple_repeat 2 83 0 1086 196 20 125 chr5 45661146 45661554 -153968596 - MLT2D LTR ERVL -48 366 2 453 287 31 36 chr5 45662006 45662201 -153967949 + L1MEd LINE L1 2103 2296 -4100 308 221 11 11 chr5 45662284 45662379 -153967771 + HAL1 LINE L1 2258 2352 -155 5695 7 0 6 chr5 45662390 45663064 -153967086 + L1HS LINE L1 5486 6155 0 724 233 93 5 chr5 45663917 45664110 -153966040 - MER63A DNA MER1_type 0 210 1 508 271 60 32 chr5 45664225 45664759 -153965391 + L1MCc LINE L1 1126 1847 -4891 1465 224 47 0 chr5 45664818 45665140 -153965010 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 45665141 45665193 -153964957 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2505 53 20 0 chr5 45665239 45665538 -153964612 + AluY SINE Alu 1 305 -6 201 147 0 0 chr5 45665541 45665575 -153964575 + (TA)n Simple_repeat Simple_repeat 1 34 0 424 281 22 43 chr5 45666035 45666174 -153963976 + MER5B DNA MER1_type 43 178 0 746 230 16 95 chr5 45666558 45666810 -153963340 + MIR SINE MIR 31 262 0 433 308 146 39 chr5 45666870 45667234 -153962916 + L1MCc LINE L1 3671 4073 -2868 446 209 22 0 chr5 45668352 45668443 -153961707 + MER63 DNA MER1_type 33 751 -85 243 152 22 0 chr5 45668447 45668493 -153961657 + MER63 DNA MER1_type 978 1024 -36 359 336 34 17 chr5 45668696 45668815 -153961335 - L2 LINE L2 -2 3270 3150 181 310 0 17 chr5 45669121 45669179 -153960971 - MIR SINE MIR -50 212 156 424 262 63 16 chr5 45670350 45670476 -153959674 + L2 LINE L2 3182 3313 0 23 0 0 0 chr5 45672539 45672562 -153957588 + AT_rich Low_complexity Low_complexity 1 23 0 3489 194 31 12 chr5 45672861 45674119 -153956031 + L1MB2 LINE L1 4389 5680 -491 1709 123 3 28 chr5 45674122 45674407 -153955743 - Tigger3(Golem) DNA MER2_type 0 3038 2761 2159 171 6 49 chr5 45674416 45674884 -153955266 + L1MB2 LINE L1 5688 6135 -36 22 0 0 0 chr5 45674890 45674912 -153955238 + AT_rich Low_complexity Low_complexity 1 22 0 370 222 0 0 chr5 45675173 45675245 -153954905 - L2 LINE L2 0 3272 3201 13771 148 24 10 chr5 45675485 45676096 -153954054 - Tigger1 DNA MER2_type 0 2418 1817 2331 78 0 10 chr5 45676096 45676390 -153953760 + AluY SINE Alu 1 291 -20 13771 148 24 10 chr5 45676390 45678161 -153951989 - Tigger1 DNA MER2_type -601 1817 1 261 325 117 0 chr5 45678529 45678649 -153951501 + MIR3 SINE MIR 63 196 -12 739 223 69 6 chr5 45678724 45678899 -153951251 + MER5A DNA MER1_type 1 186 -3 248 232 18 0 chr5 45679192 45679248 -153950902 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 185 321 49 12 chr5 45680042 45680123 -153950027 + MIR SINE MIR 108 191 -71 333 310 41 41 chr5 45680302 45680473 -153949677 - MIR SINE MIR -70 192 22 2378 100 0 0 chr5 45680544 45680853 -153949297 - AluSc SINE Alu 0 309 1 4078 237 56 30 chr5 45680877 45683134 -153947016 + L1ME1 LINE L1 3839 6156 -10 7993 83 4 18 chr5 45683407 45684494 -153945656 + MER11C LTR ERVK 1 1071 0 351 294 153 6 chr5 45684571 45684734 -153945416 + MIR SINE MIR 11 197 -65 180 97 0 0 chr5 45685879 45685910 -153944240 + (T)n Simple_repeat Simple_repeat 1 31 0 1968 143 0 0 chr5 45686650 45686937 -153943213 - AluSx SINE Alu -25 287 1 235 309 15 0 chr5 45687693 45687761 -153942389 + CT-rich Low_complexity Low_complexity 3 71 0 1360 226 50 101 chr5 45688054 45688597 -153941553 - MLT2B1 LTR ERVL 0 520 6 520 14 29 0 chr5 45690115 45690184 -153939966 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 8419 191 12 11 chr5 45691572 45694105 -153936045 + L1PA15 LINE L1 3627 6159 -6 678 152 61 18 chr5 45695887 45696052 -153934098 + MER96B DNA MER1_type? 8 179 -238 2546 126 163 76 chr5 45699205 45699770 -153930380 + LTR18B LTR ERVL 1 614 0 402 207 152 70 chr5 45699941 45700147 -153930003 + MIR SINE MIR 2 212 -50 401 365 30 77 chr5 45703559 45703923 -153926227 - L2 LINE L2 0 3272 2926 1523 205 5 80 chr5 45704170 45704570 -153925580 - MLT1A2 LTR MaLR -4 370 1 378 0 0 0 chr5 45704871 45704913 -153925237 + (TG)n Simple_repeat Simple_repeat 2 43 0 666 297 73 23 chr5 45705127 45705346 -153924804 + MIR SINE MIR 2 231 -31 214 242 10 30 chr5 45705367 45705466 -153924684 + A-rich Low_complexity Low_complexity 3 99 0 225 260 41 0 chr5 45705475 45705598 -153924552 + L1ME4a LINE L1 5994 6121 0 223 260 96 0 chr5 45705693 45705766 -153924384 + MIR SINE MIR 132 211 -51 525 349 74 10 chr5 45705806 45706210 -153923940 + LTR33 LTR ERVL 77 506 -15 217 150 50 0 chr5 45706416 45706456 -153923694 - MIR SINE MIR -9 253 212 697 233 0 0 chr5 45706457 45706607 -153923543 - MER21-int LTR ERV1 -3695 496 347 2688 226 64 29 chr5 45706608 45707356 -153922794 - MER21B LTR ERV1 -47 816 43 237 232 0 134 chr5 45707360 45707442 -153922708 - MER21B LTR ERV1 -775 88 18 638 273 167 0 chr5 45708258 45708456 -153921694 + MIR SINE MIR 2 232 -30 406 203 102 34 chr5 45708632 45708750 -153921400 - L2 LINE L2 -4 3309 3184 268 0 0 0 chr5 45708775 45708807 -153921343 + MLT2A1 LTR ERVL 29 60 -384 652 207 86 6 chr5 45708809 45708846 -153921304 - Ricksha DNA DNA -2863 383 333 31006 80 4 5 chr5 45708846 45713086 -153917064 - HERVL-A1 LTR ERVL 0 5654 1418 11187 70 7 0 chr5 45713222 45714643 -153915507 - HERVL-A1 LTR ERVL -4204 1450 20 2999 102 33 0 chr5 45714649 45715079 -153915071 - MLT2A1 LTR ERVL 0 444 1 241 226 24 60 chr5 45715186 45715270 -153914880 + MIR3 SINE MIR 125 205 -3 676 353 65 37 chr5 45715312 45715666 -153914484 - L2 LINE L2 0 3272 2909 539 336 8 51 chr5 45715703 45715938 -153914212 - MIR SINE MIR -30 232 8 324 335 119 53 chr5 45715932 45716197 -153913953 - L2 LINE L2 -394 2919 2673 * 337 307 193 0 chr5 45716197 45716260 -153913890 + MER5A DNA MER1_type 11 61 -128 1926 87 0 23 chr5 45716260 45716525 -153913625 + AluY SINE Alu 1 259 -52 337 307 193 0 chr5 45716525 45716611 -153913539 + MER5A DNA MER1_type 61 189 0 341 253 213 27 chr5 45716619 45716769 -153913381 + MER5B DNA MER1_type 1 178 0 324 335 119 53 chr5 45716769 45717268 -153912882 - L2 LINE L2 -646 2667 1934 1485 177 22 130 chr5 45717276 45717442 -153912708 - MLT1A1 LTR MaLR -2 363 265 2292 110 51 28 chr5 45717442 45717798 -153912352 + THE1B LTR MaLR 1 364 0 1485 177 22 130 chr5 45717798 45718038 -153912112 - MLT1A1 LTR MaLR -100 265 1 269 294 92 34 chr5 45718414 45718533 -153911617 - L2 LINE L2 -6 3266 3141 1533 167 67 4 chr5 45719260 45719529 -153910621 + AluJo SINE Alu 3 288 -24 1010 164 22 76 chr5 45720554 45720779 -153909371 - MER20 DNA MER1_type -1 218 6 282 56 0 0 chr5 45721426 45721462 -153908688 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr5 45724057 45724092 -153906058 + AT_rich Low_complexity Low_complexity 1 35 0 2459 255 55 5 chr5 45724772 45725529 -153904621 + Zaphod DNA AcHobo 66 860 -3171 313 171 14 0 chr5 45725540 45725610 -153904540 + Zaphod DNA AcHobo 3832 3902 -129 227 345 146 18 chr5 45727274 45727384 -153902766 + L2 LINE L2 3142 3265 -7 570 181 76 28 chr5 45727890 45728034 -153902116 + L1MC1 LINE L1 6183 6333 0 1046 154 26 5 chr5 45728089 45728284 -153901866 - L1PA16 LINE L1 -9 6157 5959 1429 212 10 49 chr5 45728284 45728670 -153901480 - L1P LINE L1 -829 5317 4947 3822 223 7 20 chr5 45728671 45729618 -153900532 + L1P LINE L1 4011 4945 -1201 278 315 47 20 chr5 45729662 45729811 -153900339 + L1MEd LINE L1 857 1009 -5363 518 293 151 23 chr5 45729934 45730525 -153899625 + L1MEd LINE L1 1071 1887 -4676 400 270 101 45 chr5 45730586 45730764 -153899386 - L2 LINE L2 -1362 1952 1765 1444 303 44 39 chr5 45730764 45731352 -153898798 - L2 LINE L2 -1691 1623 1033 706 287 96 51 chr5 45731359 45731787 -153898363 - LTR16B LTR ERVL 0 464 18 1279 155 48 0 chr5 45731834 45732069 -153898081 + AluSg/x SINE Alu 68 312 0 180 111 0 0 chr5 45732133 45732160 -153897990 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 392 322 0 26 chr5 45732633 45732748 -153897402 + MIR SINE MIR 26 137 -125 2095 230 29 23 chr5 45732818 45733523 -153896627 - LTR27 LTR ERV1 0 636 3 197 324 111 19 chr5 45734576 45734684 -153895466 - L2 LINE L2 -2882 432 315 2198 110 7 23 chr5 45735125 45735435 -153894715 - AluSx SINE Alu -7 305 1 375 272 128 31 chr5 45736208 45736403 -153893747 + MIR SINE MIR 22 235 -27 1996 183 31 5 chr5 45736439 45736821 -153893329 + L1MC1 LINE L1 5942 6333 0 22 0 0 0 chr5 45736825 45736847 -153893303 + AT_rich Low_complexity Low_complexity 1 22 0 279 224 52 0 chr5 45738088 45738146 -153892004 + L2 LINE L2 3175 3235 -37 2536 121 159 116 chr5 45738281 45738943 -153891207 - L1MA6 LINE L1 -23 6277 5588 * 5226 128 25 15 chr5 45738928 45739286 -153890864 - L1PB4 LINE L1 -3 6856 6503 345 100 0 0 chr5 45739286 45739336 -153890814 + (TG)n Simple_repeat Simple_repeat 2 51 0 5226 128 25 15 chr5 45739336 45739868 -153890282 - L1PB4 LINE L1 -356 6503 5957 1711 115 50 149 chr5 45739883 45740299 -153889851 + THE1C LTR MaLR 1 375 0 5662 238 31 76 chr5 45740299 45741482 -153888668 - L1PB4 LINE L1 -903 5946 4711 2119 162 78 16 chr5 45741482 45741865 -153888285 + MSTB LTR MaLR 1 407 -19 2414 173 14 5 chr5 45741872 45742294 -153887856 - MSTB LTR MaLR 0 426 1 5662 238 31 76 chr5 45742294 45743451 -153886699 - L1PB4 LINE L1 -2144 4705 3497 339 186 0 0 chr5 45743451 45743521 -153886629 + MER41A LTR ERV1 399 468 -86 5662 238 31 76 chr5 45743521 45746952 -153883198 - L1PB4 LINE L1 -3352 3497 433 2343 90 0 31 chr5 45746952 45747273 -153882877 + AluY SINE Alu 1 311 0 5662 238 31 76 chr5 45747273 45747688 -153882462 - L1PB4 LINE L1 -6416 433 1 929 173 0 6 chr5 45747691 45747859 -153882291 - L1M2 LINE L1 -684 5616 5450 2759 173 4 10 chr5 45747867 45748467 -153881683 + L1M1 LINE L1 4844 5442 -744 231 269 154 8 chr5 45748516 45748646 -153881504 + Charlie8 DNA MER1_type 24 172 -2245 30 45 0 0 chr5 45749098 45749142 -153881008 + AT_rich Low_complexity Low_complexity 1 44 0 34 55 0 0 chr5 45750308 45750363 -153879787 + AT_rich Low_complexity Low_complexity 1 55 0 1072 283 87 27 chr5 45750747 45751185 -153878965 + MLT2F LTR ERVL 200 663 0 431 280 106 34 chr5 45751187 45751451 -153878699 - L1MEc LINE L1 -4003 2393 2111 482 286 108 9 chr5 45751638 45751869 -153878281 - L1MEc LINE L1 -4260 2136 1883 308 275 100 42 chr5 45751891 45752011 -153878139 - L1MEc LINE L1 -4531 1684 1558 651 259 17 35 chr5 45752024 45752045 -153878105 - L1P LINE L1 -1507 4639 4619 5193 160 23 22 chr5 45752045 45753574 -153876576 - L1PA15 LINE L1 -3 7600 6069 * 6645 52 17 0 chr5 45753568 45754856 -153875294 - L1PA7 LINE L1 0 6154 4875 651 259 17 35 chr5 45753574 45755092 -153875058 - L1P LINE L1 -1527 4619 4410 1044 219 2 95 chr5 45755154 45755596 -153874554 - L1PA15 LINE L1 -1680 5904 5504 5292 251 44 24 chr5 45755600 45758458 -153871692 - L1PA15 LINE L1 -2918 4666 1667 9304 201 84 23 chr5 45758470 45758552 -153871598 - L1MCa LINE L1 -1793 4633 4557 414 57 0 0 chr5 45758552 45758605 -153871545 + (TG)n Simple_repeat Simple_repeat 1 53 0 9304 201 84 23 chr5 45758605 45761651 -153868499 - L1MCa LINE L1 -1869 4557 1198 2161 83 17 3 chr5 45761651 45761811 -153868339 - AluY SINE Alu -19 292 125 423 0 0 0 chr5 45761811 45761858 -153868292 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2161 83 17 3 chr5 45761858 45761985 -153868165 - AluY SINE Alu -186 125 1 9304 201 84 23 chr5 45761985 45762932 -153867218 - L1MCa LINE L1 -5228 1198 310 274 303 53 37 chr5 45762955 45763390 -153866760 - L1MEc LINE L1 -4873 1523 1082 2082 114 3 14 chr5 45763454 45763743 -153866407 - AluSp SINE Alu -27 286 1 7818 142 24 6 chr5 45763982 45764038 -153866112 - Tigger2 DNA MER2_type -1 2717 2663 4227 58 0 4 chr5 45764038 45764571 -153865579 + L1PA7 LINE L1 5617 6147 -7 7818 142 24 6 chr5 45764571 45765842 -153864308 - Tigger2 DNA MER2_type -55 2663 1366 1360 190 20 70 chr5 45765908 45766308 -153863842 - LTR56 LTR ERV1 -57 388 9 * 7720 137 23 30 chr5 45766302 45767191 -153862959 - Tigger2 DNA MER2_type -1336 1382 505 2721 29 0 3 chr5 45767191 45767499 -153862651 + AluY SINE Alu 1 307 -4 7720 137 23 30 chr5 45767499 45768001 -153862149 - Tigger2 DNA MER2_type -2213 505 1 252 0 0 0 chr5 45768295 45768323 -153861827 + (TG)n Simple_repeat Simple_repeat 1 28 0 183 129 0 0 chr5 45768323 45768354 -153861796 + (TGG)n Simple_repeat Simple_repeat 3 33 0 412 245 180 0 chr5 45769037 45769191 -153860959 - MIR SINE MIR -28 234 53 4144 206 24 5 chr5 45769342 45770276 -153859874 - L1MD2 LINE L1 -13 6346 5396 247 206 131 19 chr5 45770554 45770661 -153859489 - L1MC5 LINE L1 -37 7924 7806 198 0 0 0 chr5 45771660 45771682 -153858468 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 424 182 71 0 chr5 45771906 45772005 -153858145 + L2 LINE L2 3177 3282 -31 1832 231 78 83 chr5 45772009 45772780 -153857370 + LTR41 LTR ERVL 1 767 -6 223 245 0 0 chr5 45772999 45773048 -153857102 - L2 LINE L2 0 3313 3265 182 118 29 0 chr5 45773194 45773228 -153856922 + CT-rich Low_complexity Low_complexity 1 35 0 186 305 207 8 chr5 45773321 45773577 -153856573 - L3b LINE CR1 -171 1412 1106 2023 144 0 13 chr5 45773733 45774038 -153856112 - AluJb SINE Alu -7 305 5 2027 103 15 0 chr5 45774070 45774341 -153855809 - AluSp SINE Alu -18 295 21 367 209 0 44 chr5 45774677 45774768 -153855382 + HsTC2 DNA Tc2 7 93 -1805 195 42 0 0 chr5 45775244 45775268 -153854882 + (CCCCAA)n Simple_repeat Simple_repeat 6 29 0 3822 178 45 29 chr5 45775401 45776171 -153853979 + LTR39 LTR ERV1 1 783 0 181 245 75 0 chr5 45776696 45776749 -153853401 + MIR SINE MIR 139 195 -67 1619 203 14 0 chr5 45778059 45778340 -153851810 + AluJb SINE Alu 7 291 -21 3684 42 0 31 chr5 45779083 45779561 -153850589 + L1PA5 LINE L1 5692 6154 0 238 224 0 0 chr5 45782315 45782364 -153847786 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2566 66 0 0 chr5 45782859 45783161 -153846989 - AluSp SINE Alu -11 302 1 260 67 0 183 chr5 45784055 45784115 -153846035 + MADE1 DNA Mariner 32 80 0 356 279 96 15 chr5 45784336 45784472 -153845678 + L1MB2 LINE L1 5133 5279 -867 3709 158 42 6 chr5 45784480 45785187 -153844963 + L1MB2 LINE L1 5407 6139 -32 222 203 14 87 chr5 45785717 45785786 -153844364 - L2 LINE L2 -64 3249 3186 2427 65 0 0 chr5 45787388 45787679 -153842471 + AluY SINE Alu 1 291 -20 2355 125 17 3 chr5 45787887 45788246 -153841904 + THE1B LTR MaLR 1 364 0 2406 78 0 23 chr5 45789198 45789507 -153840643 + AluY SINE Alu 1 302 -9 484 259 88 0 chr5 45790201 45790348 -153839802 - L3 LINE CR1 -2 1575 1416 2094 108 0 24 chr5 45790568 45790864 -153839286 - AluSx SINE Alu -15 297 9 12425 33 11 0 chr5 45792099 45794363 -153835787 - L1PA5 LINE L1 -2 6152 3870 11693 36 16 1 chr5 45794363 45795909 -153834241 + L1PA5 LINE L1 2313 3881 -2265 279 283 0 0 chr5 45796090 45796150 -153834000 - L2 LINE L2 -2 3311 3252 426 356 118 35 chr5 45796195 45796996 -153833154 + L2 LINE L2 2154 3017 -255 230 299 299 30 chr5 45797027 45797291 -153832859 - L2 LINE L2 -13 3259 2925 216 0 0 0 chr5 45799752 45799776 -153830374 + (T)n Simple_repeat Simple_repeat 1 24 0 318 262 65 0 chr5 45799803 45799910 -153830240 - HAL1 LINE L1 -145 2362 2249 323 279 23 0 chr5 45801070 45801156 -153828994 + MIR SINE MIR 1 88 -174 281 290 149 0 chr5 45801763 45801870 -153828280 + MIR3 SINE MIR 9 131 -77 1512 182 23 19 chr5 45802087 45802351 -153827799 + AluJo SINE Alu 7 271 -41 182 33 67 0 chr5 45802359 45802389 -153827761 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 507 69 0 0 chr5 45802886 45802958 -153827192 + (CA)n Simple_repeat Simple_repeat 2 73 0 1014 129 0 0 chr5 45804023 45804178 -153825972 + L1MA1 LINE L1 6148 6302 0 21 0 0 0 chr5 45804178 45804199 -153825951 + AT_rich Low_complexity Low_complexity 1 21 0 254 208 0 13 chr5 45805356 45805433 -153824717 + L1M4c LINE L1 1743 1818 -4566 203 339 152 12 chr5 45806010 45806175 -153823975 + MIR SINE MIR 33 220 -42 822 264 67 77 chr5 45806216 45806779 -153823371 - L2 LINE L2 -4 3309 2677 313 309 110 71 chr5 45806915 45807197 -153822953 + L2 LINE L2 2979 3271 -1 219 375 101 31 chr5 45807545 45808062 -153822088 - L2 LINE L2 -573 2741 2189 437 286 25 36 chr5 45808424 45808620 -153821530 - MLT1J LTR MaLR -298 213 20 219 209 15 15 chr5 45809426 45809493 -153820657 + A-rich Low_complexity Low_complexity 5 71 0 432 279 184 15 chr5 45810868 45811069 -153819081 + MIR SINE MIR 28 262 0 377 204 143 20 chr5 45811099 45811197 -153818953 + L2 LINE L2 3194 3303 -10 22 0 0 0 chr5 45812638 45812660 -153817490 + AT_rich Low_complexity Low_complexity 1 22 0 296 268 45 36 chr5 45813860 45813972 -153816178 + MIR SINE MIR 94 206 -56 814 284 96 21 chr5 45814778 45815140 -153815010 + MLT1J1 LTR MaLR 45 433 -13 205 258 32 137 chr5 45815263 45815387 -153814763 + L2 LINE L2 3161 3271 -1 194 347 27 0 chr5 45815941 45816016 -153814134 - L2 LINE L2 -8 3264 3188 466 85 12 12 chr5 45817302 45817384 -153812766 + (TA)n Simple_repeat Simple_repeat 1 82 0 272 328 136 20 chr5 45817415 45817717 -153812433 + L2 LINE L2 1954 2290 -1024 726 272 42 22 chr5 45817734 45818083 -153812067 + MLT1J2 LTR MaLR 1 393 -57 540 332 132 22 chr5 45818090 45818599 -153811551 + L2 LINE L2 2331 2895 -419 1322 205 38 27 chr5 45819073 45819366 -153810784 + AluJo SINE Alu 1 296 -16 1909 107 59 4 chr5 45819398 45819691 -153810459 - AluSx SINE Alu 0 308 1 322 171 0 53 chr5 45821490 45821566 -153808584 + MER116 DNA Mariner 8 79 -1 1558 162 0 84 chr5 45822924 45823232 -153806918 + AluJb SINE Alu 1 282 -30 977 184 82 10 chr5 45823927 45824134 -153806016 + L1MC4a LINE L1 6603 6824 -984 351 315 179 9 chr5 45824658 45824887 -153805263 + MIR SINE MIR 6 256 -6 401 275 8 15 chr5 45825500 45825631 -153804519 + L1ME LINE L1 1785 1914 -4482 181 240 60 20 chr5 45826045 45826095 -153804055 + L3 LINE CR1 1403 1454 -123 343 284 95 0 chr5 45827198 45827346 -153802804 + L1ME LINE L1 5607 5768 -422 929 293 80 61 chr5 45827381 45827955 -153802195 + L1MEc LINE L1 116 700 -5696 561 289 32 0 chr5 45827973 45828163 -153801987 + L1MEc LINE L1 1695 1890 -4506 654 259 18 6 chr5 45828818 45828988 -153801162 - MER5B DNA MER1_type -3 175 4 409 356 43 0 chr5 45829290 45829453 -153800697 + MIR3 SINE MIR 16 185 -23 656 266 101 21 chr5 45829455 45829692 -153800458 + MIR SINE MIR 7 262 0 2429 61 3 10 chr5 45829708 45830021 -153800129 + AluY SINE Alu 1 311 0 257 306 217 25 chr5 45832172 45832329 -153797821 + MIR SINE MIR 3 189 -73 458 212 0 106 chr5 45832335 45832467 -153797683 - L2 LINE L2 -4 3309 3192 1025 205 120 0 chr5 45832468 45832668 -153797482 + MER58A DNA MER1_type 1 224 0 2110 226 158 12 chr5 45832716 45833933 -153796217 - L1MEc LINE L1 -3169 3046 1695 534 300 0 25 chr5 45833951 45834151 -153795999 - L1MEc LINE L1 -5696 700 506 216 0 0 0 chr5 45834152 45834176 -153795974 + (T)n Simple_repeat Simple_repeat 1 24 0 506 181 124 112 chr5 45835282 45835541 -153794609 - L1MC5 LINE L1 -63 7898 7637 246 390 0 21 chr5 45835570 45835665 -153794485 - MIR SINE MIR -78 130 38 6092 88 20 15 chr5 45835781 45835992 -153794158 + L1PA11 LINE L1 5178 5387 -787 2021 144 3 0 chr5 45835992 45836284 -153793866 + AluSx SINE Alu 3 295 -17 6092 88 20 15 chr5 45836284 45837065 -153793085 + L1PA11 LINE L1 5387 6174 0 257 175 105 0 chr5 45837073 45837130 -153793020 + MIR SINE MIR 81 143 -65 210 336 56 65 chr5 45837147 45837254 -153792896 - L2 LINE L2 -5 3267 3162 2327 88 0 0 chr5 45837301 45837597 -153792553 + AluY SINE Alu 1 296 -15 389 306 87 20 chr5 45837708 45837904 -153792246 - L1 LINE L1 -1681 4465 4257 321 323 77 20 chr5 45838276 45838471 -153791679 - L1 LINE L1 -2689 3457 3252 236 324 35 12 chr5 45838550 45838720 -153791430 - L1 LINE L1 -3127 3019 2846 332 342 34 17 chr5 45838888 45839005 -153791145 + MIR3 SINE MIR 3 121 -87 922 201 72 0 chr5 45839009 45839203 -153790947 + MER3 DNA MER1_type 1 208 -1 2296 97 0 0 chr5 45841080 45841368 -153788782 - AluSg SINE Alu -22 288 1 1779 198 29 21 chr5 45842068 45842538 -153787612 - L1MD3 LINE L1 0 7995 7387 274 214 29 57 chr5 45842538 45842608 -153787542 - MLT1F1 LTR MaLR -457 110 43 2927 222 50 59 chr5 45842622 45843419 -153786731 + MER21B LTR ERV1 17 806 -57 424 171 117 0 chr5 45843450 45843561 -153786589 - L1MC3 LINE L1 -699 7086 6963 233 56 0 28 chr5 45843565 45843601 -153786549 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2017 114 0 0 chr5 45843603 45843876 -153786274 - AluY SINE Alu -24 287 15 749 155 39 0 chr5 45894389 45894518 -153735632 + AluSq/x SINE Alu 1 134 -179 21 36 0 0 chr5 45897712 45897740 -153732410 + AT_rich Low_complexity Low_complexity 1 28 0 2070 162 73 5 chr5 45898708 45899103 -153731047 + MSTB LTR MaLR 5 426 0 234 196 20 0 chr5 45899840 45899891 -153730259 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 509 252 181 24 chr5 45901256 45901554 -153728596 + L1ME4a LINE L1 5712 6056 -65 190 329 79 14 chr5 45901762 45901902 -153728248 + L2 LINE L2 2505 2653 -661 817 249 39 0 chr5 45903503 45903732 -153726418 + L1MA4 LINE L1 6059 6296 -4 216 399 86 17 chr5 45905245 45905478 -153724672 + L3 LINE CR1 255 503 -1074 215 256 103 0 chr5 45905808 45905886 -153724264 + L3 LINE CR1 596 681 -896 340 305 86 33 chr5 45906425 45906576 -153723574 + L3 LINE CR1 663 821 -756 2350 256 131 0 chr5 45906681 45907115 -153723035 + L1PA3 LINE L1 5664 6154 -1 24 0 0 0 chr5 45907459 45907483 -153722667 + AT_rich Low_complexity Low_complexity 1 24 0 782 191 0 0 chr5 45907575 45907706 -153722444 - FLAM_A SINE Alu -2 131 1 2140 166 98 5 chr5 45908781 45909208 -153720942 + LTR24 LTR ERV1 1 467 0 339 364 86 25 chr5 45909485 45909647 -153720503 + MIR3 SINE MIR 19 190 -18 2003 104 7 0 chr5 45910115 45910385 -153719765 - AluSx SINE Alu -30 282 11 426 290 150 17 chr5 45910867 45911229 -153718921 + L1ME LINE L1 5347 5758 -363 1812 193 81 3 chr5 45912190 45912801 -153717349 - L1MC/D LINE L1 -698 5926 5261 355 209 110 0 chr5 45913224 45913315 -153716835 - L1MC/D LINE L1 -4262 2164 2064 * 2556 196 22 10 chr5 45913307 45913802 -153716348 - L1MC/D LINE L1 -5905 521 21 275 333 105 7 chr5 45914199 45914352 -153715798 + MIR SINE MIR 15 182 -80 567 222 43 43 chr5 45915795 45915957 -153714193 + MSTB1 LTR MaLR 217 378 -54 685 313 112 24 chr5 45916782 45917274 -153712876 + L2 LINE L2 2171 2705 -609 185 282 51 77 chr5 45917475 45917592 -153712558 + MIR SINE MIR 106 219 -43 2010 84 7 54 chr5 45918194 45918516 -153711634 - AluSq SINE Alu 0 308 1 447 195 214 31 chr5 45918912 45919071 -153711079 - MER58C DNA MER1_type -1 214 27 940 271 58 45 chr5 45921317 45921693 -153708457 + L2 LINE L2 2895 3275 -38 226 296 0 12 chr5 45921862 45921943 -153708207 + L1MC5 LINE L1 7822 7901 -60 398 162 90 27 chr5 45922114 45922225 -153707925 + L1M1 LINE L1 16 133 -7432 8522 125 79 18 chr5 45922234 45922473 -153707677 + L1M1 LINE L1 1522 1745 -5820 279 0 0 0 chr5 45922473 45922504 -153707646 + (GA)n Simple_repeat Simple_repeat 2 32 0 8522 125 79 18 chr5 45922504 45923915 -153706235 + L1M1 LINE L1 1745 3273 -4292 1310 121 0 11 chr5 45923915 45924097 -153706053 + AluSx SINE Alu 1 180 -132 462 82 0 0 chr5 45924097 45924158 -153705992 + AluSp/q SINE Alu 235 295 -18 2314 151 38 32 chr5 45924161 45924980 -153705170 + L1M1 LINE L1 3265 4084 -3481 1643 173 82 20 chr5 45924990 45925442 -153704708 + L1M1 LINE L1 4409 4888 -2677 262 48 0 0 chr5 45925443 45925485 -153704665 + L1MA3 LINE L1 6264 6305 0 2099 132 6 40 chr5 45926634 45926982 -153703168 - MER1B DNA MER1_type -1 336 1 27 0 0 0 chr5 45927135 45927162 -153702988 + AT_rich Low_complexity Low_complexity 1 27 0 707 281 57 18 chr5 45927888 45928116 -153702034 + MIR SINE MIR 10 246 -16 640 198 128 11 chr5 45928626 45928755 -153701395 + MER3 DNA MER1_type 1 160 -49 1575 151 68 11 chr5 45928755 45929033 -153701117 - AluJb SINE Alu -13 299 6 640 198 128 11 chr5 45929033 45929090 -153701060 + MER3 DNA MER1_type 160 209 0 311 296 8 32 chr5 45929090 45929207 -153700943 + MER117 DNA MER1_type 43 158 -39 216 367 57 32 chr5 45932708 45932866 -153697284 - L2 LINE L2 -221 3051 2890 403 286 86 0 chr5 45933062 45933272 -153696878 - L1M4 LINE L1 -1537 4609 4382 1541 274 186 32 chr5 45933862 45935117 -153695033 + L2 LINE L2 1843 3295 -18 26 64 0 0 chr5 45935483 45935530 -153694620 + AT_rich Low_complexity Low_complexity 1 47 0 246 95 0 0 chr5 45935690 45935732 -153694418 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7056 15 9 0 chr5 45935732 45936589 -153693561 - L1PA3 LINE L1 -10 6145 5281 * 15741 32 1 11 chr5 45936586 45938673 -153691477 + L1PA3 LINE L1 3206 5273 -873 668 175 56 16 chr5 45940626 45940752 -153689398 + FLAM_C SINE Alu 1 131 -2 1159 168 177 37 chr5 45941470 45941798 -153688352 + MLT1A2 LTR MaLR 1 374 0 1806 122 54 44 chr5 45942403 45942698 -153687452 + AluSx SINE Alu 6 303 -9 196 321 0 0 chr5 45943274 45943327 -153686823 - MIR SINE MIR -58 150 98 22 70 0 0 chr5 45943792 45943835 -153686315 + AT_rich Low_complexity Low_complexity 1 43 0 2040 244 55 25 chr5 45944276 45944988 -153685162 + L1ME3A LINE L1 5428 6160 -10 258 304 76 0 chr5 45945176 45945255 -153684895 - L2 LINE L2 -1 3271 3187 1045 275 148 5 chr5 45946505 45946945 -153683205 + L2 LINE L2 2365 2867 -447 592 267 175 51 chr5 45946945 45947357 -153682793 + LTR33 LTR ERVL 13 475 -46 2058 193 10 8 chr5 45948465 45948858 -153681292 + MER44D DNA MER2_type 8 401 -304 1137 174 28 0 chr5 45948856 45949074 -153681076 + MER44D DNA MER2_type 457 552 -53 * 335 23 23 0 chr5 45949418 45949462 -153680688 + (TA)n Simple_repeat Simple_repeat 2 46 0 2056 104 4 0 chr5 45951492 45951762 -153678388 + AluSq SINE Alu 11 281 -32 213 154 0 0 chr5 45951953 45951992 -153678158 + (CA)n Simple_repeat Simple_repeat 2 40 0 1130 172 162 0 chr5 45952392 45952682 -153677468 + MER44D DNA MER2_type 2 608 -1 913 148 136 4 chr5 45952683 45952926 -153677224 - L1MA8 LINE L1 -68 6223 5949 213 397 43 0 chr5 45953171 45953312 -153676838 - L2 LINE L2 -1 3271 3125 301 228 0 13 chr5 45953935 45954014 -153676136 + HAL1 LINE L1 1065 1142 -1365 1048 96 45 0 chr5 45954482 45954659 -153675491 - L1MA1 LINE L1 -102 6200 6016 268 247 83 107 chr5 45955043 45955230 -153674920 + MIR SINE MIR 23 200 -62 22 56 0 0 chr5 45955350 45955386 -153674764 + AT_rich Low_complexity Low_complexity 1 36 0 480 91 0 0 chr5 45956503 45956580 -153673570 - L1PB1 LINE L1 0 6151 6075 198 234 69 122 chr5 45956696 45956884 -153673266 - L2 LINE L2 -38 3275 3098 190 315 136 47 chr5 45956934 45957191 -153672959 - L2 LINE L2 -803 2511 2232 857 173 49 0 chr5 45957389 45957551 -153672599 + MER5A DNA MER1_type 20 189 0 224 328 70 39 chr5 45957662 45957790 -153672360 - L2 LINE L2 -2 3270 3139 2544 4 0 0 chr5 45957880 45958152 -153671998 + AluYa5 SINE Alu 23 294 -17 422 266 149 0 chr5 45960568 45960722 -153669428 + MIR SINE MIR 86 262 0 186 128 0 0 chr5 45961933 45961972 -153668178 + (T)n Simple_repeat Simple_repeat 1 39 0 1955 140 29 18 chr5 45962025 45962136 -153668014 + MER7A DNA MER2_type 2 110 -2928 1551 134 48 70 chr5 45962136 45962449 -153667701 + AluJb SINE Alu 1 306 -6 1955 140 29 18 chr5 45962449 45962680 -153667470 + MER7A DNA MER2_type 110 346 0 244 218 99 40 chr5 45963349 45963450 -153666700 + L2 LINE L2 2682 2788 -526 315 326 12 0 chr5 45963583 45963669 -153666481 + MIR SINE MIR 6 92 -170 673 160 8 0 chr5 45963788 45963907 -153666243 - MLT1A1 LTR MaLR 0 374 255 965 194 95 54 chr5 45963919 45964339 -153665811 + MER57A LTR ERV1 3 403 0 957 195 82 35 chr5 45964339 45964570 -153665580 - MLT1A1 LTR MaLR -123 242 1 2095 121 23 0 chr5 45965150 45965455 -153664695 + AluSx SINE Alu 1 312 0 333 306 156 0 chr5 45966197 45966370 -153663780 + L2 LINE L2 2870 3069 -203 184 257 68 54 chr5 45966445 45966519 -153663631 + L2 LINE L2 3228 3302 -11 2600 150 44 11 chr5 45967428 45967902 -153662248 + L1MB1 LINE L1 5676 6165 -3 843 171 0 42 chr5 45968432 45968725 -153661425 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr5 45969007 45969029 -153661121 + AT_rich Low_complexity Low_complexity 1 22 0 330 276 17 9 chr5 45969339 45969455 -153660695 + L1MC/D LINE L1 5607 5723 -2085 349 338 43 81 chr5 45969576 45969922 -153660228 - L2 LINE L2 -45 3227 2895 1824 120 67 20 chr5 45970089 45970410 -153659740 - MER4B LTR ERV1 -284 495 1 2270 129 22 14 chr5 45970410 45970781 -153659369 - LTR39-int LTR ERV1 0 6758 6385 6585 123 14 37 chr5 45970883 45971992 -153658158 - LTR39-int LTR ERV1 -421 6337 5254 378 82 0 0 chr5 45971992 45972041 -153658109 + L1PA13 LINE L1 5899 5947 -227 3987 141 19 20 chr5 45972057 45972747 -153657403 - MER50 LTR ERV1 -39 695 7 1543 78 37 0 chr5 45972747 45972964 -153657186 + L1PA13 LINE L1 5938 6162 -1 1670 160 19 4 chr5 45972969 45973238 -153656912 + AluSx SINE Alu 16 288 -24 713 129 0 9 chr5 45973256 45973372 -153656778 - LTR39-int LTR ERV1 -1495 5263 5149 * 17585 143 52 35 chr5 45973364 45977655 -153652495 - LTR39-int LTR ERV1 -2050 4708 238 975 160 17 17 chr5 45977698 45977879 -153652271 - LTR39-int LTR ERV1 -6473 285 105 929 221 28 14 chr5 45978332 45978545 -153651605 - MER58A DNA MER1_type 0 224 9 505 228 81 15 chr5 45978649 45978785 -153651365 + L1M4b LINE L1 24 168 -6691 3919 179 44 12 chr5 45978793 45979523 -153650627 - LTR39 LTR ERV1 -30 753 1 5140 139 30 32 chr5 45979543 45979868 -153650282 + MER4D LTR ERV1 1 325 -578 2004 128 50 0 chr5 45979868 45980165 -153649985 - AluSx SINE Alu 0 312 1 5140 139 30 32 chr5 45980165 45980744 -153649406 + MER4D LTR ERV1 325 903 0 2462 223 89 42 chr5 45980753 45981497 -153648653 + L1M4b LINE L1 823 1623 -5232 1703 188 3 7 chr5 45981497 45981806 -153648344 + AluJo SINE Alu 1 308 -4 2462 223 89 42 chr5 45981806 45982103 -153648047 + L1M4b LINE L1 1623 1904 -4951 1995 150 7 3 chr5 45982103 45982410 -153647740 + AluSx SINE Alu 1 308 -4 254 49 0 49 chr5 45982420 45982461 -153647689 + (GGGAA)n Simple_repeat Simple_repeat 1 39 0 1238 275 26 28 chr5 45982464 45982966 -153647184 + L1M4b LINE L1 1849 2349 -4610 3348 189 9 19 chr5 45982969 45983691 -153646459 + L1MB7 LINE L1 5219 5932 -252 323 182 0 0 chr5 45983691 45983746 -153646404 - MER3 DNA MER1_type -154 55 1 535 272 0 7 chr5 45983931 45984067 -153646083 - MLT1D LTR MaLR 0 505 371 586 189 19 0 chr5 45984948 45985054 -153645096 + MLT1D LTR MaLR 28 135 -370 273 328 109 0 chr5 45985236 45985355 -153644795 - L2 LINE L2 0 3313 3182 1512 217 7 0 chr5 45986211 45986511 -153643639 - AluJo SINE Alu -6 306 5 408 310 94 35 chr5 45986881 45987220 -153642930 + L2 LINE L2 2507 2865 -449 576 123 19 0 chr5 45987509 45987615 -153642535 - L1MB8 LINE L1 0 6178 6071 35 0 0 0 chr5 45987615 45987650 -153642500 + AT_rich Low_complexity Low_complexity 1 35 0 3534 195 39 15 chr5 45987672 45988105 -153642045 - L1MB7 LINE L1 -106 6078 5657 1673 166 58 47 chr5 45988105 45988466 -153641684 - MLT1A1 LTR MaLR 0 365 1 3534 195 39 15 chr5 45988466 45989008 -153641142 - L1MB7 LINE L1 -527 5657 5083 507 195 0 68 chr5 45989043 45989161 -153640989 + MLT1C LTR MaLR 353 462 -5 785 225 107 37 chr5 45989232 45989539 -153640611 - MLT1D LTR MaLR -134 333 1 24 32 0 0 chr5 45989624 45989655 -153640495 + AT_rich Low_complexity Low_complexity 1 31 0 1532 182 42 3 chr5 45989752 45990038 -153640112 + AluJb SINE Alu 6 302 -10 592 305 95 6 chr5 45990076 45990414 -153639736 - L1ME4a LINE L1 -234 5887 5520 2815 10 0 3 chr5 45990443 45990752 -153639398 - AluYa5 SINE Alu -3 308 1 1914 158 0 16 chr5 45991250 45991567 -153638583 - AluSx SINE Alu 0 312 1 213 246 197 16 chr5 45992377 45992438 -153637712 - L2 LINE L2 -33 3239 3168 189 0 0 0 chr5 45994523 45994544 -153635606 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1083 160 11 0 chr5 45994578 45994759 -153635391 - AluJb SINE Alu -129 183 1 471 313 16 26 chr5 45998139 45998355 -153631795 - MIR3 SINE MIR -21 241 30 25 31 0 0 chr5 45999818 45999850 -153630300 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr5 45999990 46000014 -153630136 + AT_rich Low_complexity Low_complexity 1 24 0 202 286 27 15 chr5 46000451 46000562 -153629588 + MIR SINE MIR 34 212 -50 23 78 0 0 chr5 46000600 46000651 -153629499 + AT_rich Low_complexity Low_complexity 1 51 0 1911 135 55 30 chr5 46001638 46002001 -153628149 - THE1C LTR MaLR -3 372 1 687 291 62 34 chr5 46002283 46002575 -153627575 - MLT1J LTR MaLR -211 300 1 290 310 46 11 chr5 46002661 46002748 -153627402 - MIR SINE MIR -105 157 68 604 128 0 0 chr5 46003559 46003692 -153626458 + AluSg/x SINE Alu 194 326 0 1307 153 48 71 chr5 46003706 46003974 -153626176 + AluJo SINE Alu 37 298 -14 486 76 1 40 chr5 46004527 46004623 -153625527 + L1MA4A LINE L1 5970 6072 -231 2220 128 14 8 chr5 46004665 46005018 -153625132 - THE1A LTR MaLR 0 355 1 319 276 0 0 chr5 46005389 46005465 -153624685 - MIR SINE MIR -56 152 77 22 0 0 0 chr5 46005535 46005557 -153624593 + AT_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr5 46007086 46007129 -153623021 + AT_rich Low_complexity Low_complexity 1 43 0 247 369 14 27 chr5 46008190 46008412 -153621738 + L2 LINE L2 2149 2367 -947 226 220 40 0 chr5 46009109 46009159 -153620991 + L2 LINE L2 3219 3270 -2 631 265 107 47 chr5 46009608 46009861 -153620289 - L2 LINE L2 -4 3309 3042 22 0 0 0 chr5 46010627 46010649 -153619501 + AT_rich Low_complexity Low_complexity 1 22 0 724 258 79 25 chr5 46010948 46011188 -153618962 + MIR SINE MIR 7 259 -3 284 291 166 7 chr5 46011667 46011784 -153618366 + L1MC4a LINE L1 5779 5876 -1932 204 40 0 0 chr5 46011784 46011809 -153618341 + (TG)n Simple_repeat Simple_repeat 2 26 0 284 291 166 7 chr5 46011809 46011980 -153618170 + L1MC4a LINE L1 5876 6113 -1695 294 260 41 0 chr5 46012405 46012478 -153617672 + L1MC4a LINE L1 6704 6779 -1029 778 186 0 14 chr5 46012756 46012901 -153617249 + FLAM_C SINE Alu 1 143 0 616 241 121 39 chr5 46012952 46013383 -153616767 + L1MC5 LINE L1 7452 7917 -44 365 320 122 52 chr5 46014227 46014767 -153615383 - L1M2 LINE L1 -5396 1453 876 2482 60 0 0 chr5 46015485 46015784 -153614366 + AluY SINE Alu 1 299 -12 185 261 62 15 chr5 46015900 46015965 -153614185 + L3b LINE CR1 1173 1240 -343 194 333 235 8 chr5 46016497 46016629 -153613521 + MIR3 SINE MIR 38 199 -9 413 304 71 10 chr5 46016889 46017082 -153613068 - MIR SINE MIR -4 258 51 26 50 0 0 chr5 46017162 46017202 -153612948 + AT_rich Low_complexity Low_complexity 1 40 0 2582 55 0 0 chr5 46017519 46017827 -153612323 - AluY SINE Alu -3 308 1 987 143 67 48 chr5 46018362 46018571 -153611579 - MER20 DNA MER1_type -2 217 5 237 315 65 19 chr5 46019733 46019841 -153610309 - L2 LINE L2 -218 3054 2942 2334 60 43 7 chr5 46019849 46020148 -153610002 - AluY SINE Alu 0 311 2 459 316 103 83 chr5 46020270 46020725 -153609425 - L2 LINE L2 -559 2755 2292 437 270 104 0 chr5 46020727 46020842 -153609308 + L2 LINE L2 3187 3313 0 194 182 23 45 chr5 46020873 46020917 -153609233 - L2 LINE L2 -1045 2269 2227 450 339 40 91 chr5 46020951 46021553 -153608597 - L2 LINE L2 -2657 657 87 251 385 45 0 chr5 46021838 46021994 -153608156 - L2 LINE L2 -614 2700 2538 324 326 38 0 chr5 46022168 46022300 -153607850 - MIR SINE MIR -16 246 110 1807 152 18 11 chr5 46022425 46022708 -153607442 - AluJb SINE Alu -24 288 4 346 258 42 84 chr5 46023641 46023821 -153606329 - MER5A DNA MER1_type -1 188 4 21 57 0 0 chr5 46024116 46024151 -153605999 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr5 46024411 46024434 -153605716 + AT_rich Low_complexity Low_complexity 1 23 0 705 266 13 0 chr5 46024436 46024590 -153605560 + L1MCc LINE L1 348 503 -5920 1832 266 73 65 chr5 46024667 46025480 -153604670 + L1MCc LINE L1 654 1459 -5482 1585 154 4 4 chr5 46025480 46025726 -153604424 + AluJb SINE Alu 37 282 -30 1832 266 73 65 chr5 46025726 46026026 -153604124 + L1MCc LINE L1 1459 1755 -5186 796 194 109 47 chr5 46026026 46026237 -153603913 - MER58A DNA MER1_type 0 224 1 1832 266 73 65 chr5 46026237 46026654 -153603496 + L1MCc LINE L1 1755 2201 -4740 255 143 24 0 chr5 46026665 46026707 -153603443 - MSTD LTR MaLR 0 396 354 938 223 98 65 chr5 46026842 46027179 -153602971 - MSTD LTR MaLR -48 348 1 509 276 18 0 chr5 46027179 46027342 -153602808 + L1MCc LINE L1 2395 2560 -4562 602 280 68 16 chr5 46027348 46027716 -153602434 + L1MCc LINE L1 2600 2986 -4136 1849 236 92 27 chr5 46027719 46028303 -153601847 - MLT1E3 LTR MaLR -2 622 1 277 226 48 12 chr5 46028303 46028387 -153601763 + L1MCc LINE L1 2983 3069 -4053 2123 144 0 3 chr5 46029031 46029344 -153600806 - AluJb SINE Alu 0 312 1 2104 121 7 3 chr5 46029459 46029756 -153600394 - AluSx SINE Alu -14 298 1 416 244 61 9 chr5 46032179 46032294 -153597856 - MIR SINE MIR -32 230 110 372 348 30 30 chr5 46032500 46032664 -153597486 + MIR SINE MIR 10 173 -89 1904 158 62 27 chr5 46032938 46033311 -153596839 + MLT1B LTR MaLR 1 386 -4 231 384 54 0 chr5 46033506 46033618 -153596532 + L2 LINE L2 2670 2787 -527 350 329 19 6 chr5 46034175 46034336 -153595814 + L1ME LINE L1 5558 5720 -401 337 310 17 17 chr5 46034416 46034532 -153595618 + L2 LINE L2 3196 3311 -2 6907 51 41 1 chr5 46034610 46035473 -153594677 + MER11D LTR ERVK 1 897 0 690 237 73 0 chr5 46037159 46037336 -153592814 + MER3 DNA MER1_type 3 192 -17 2398 74 3 0 chr5 46037340 46037637 -153592513 - AluY SINE Alu -13 298 1 443 255 87 19 chr5 46037841 46038049 -153592101 - L1MEc LINE L1 -4519 1877 1656 12119 62 3 2 chr5 46038050 46040429 -153589721 + L1PA7 LINE L1 3774 6154 0 250 260 15 87 chr5 46041470 46041666 -153588484 - L1M4 LINE L1 -2636 3510 3329 848 184 12 86 chr5 46041695 46041940 -153588210 - L1MB8 LINE L1 -60 6118 5892 232 258 98 18 chr5 46041961 46042124 -153588026 - L1MEc LINE L1 -5099 1106 931 2091 48 11 4 chr5 46042202 46042475 -153587675 - L1PA4 LINE L1 -2 6153 5879 2706 54 0 0 chr5 46042475 46042807 -153587343 + L1PA4 LINE L1 5560 5891 -263 354 326 54 14 chr5 46043543 46043690 -153586460 - MIR3 SINE MIR -16 192 40 234 67 44 0 chr5 46045574 46045619 -153584531 - LTR66 LTR ERVL -170 440 394 243 141 14 28 chr5 46045619 46045690 -153584460 + (TA)n Simple_repeat Simple_repeat 2 71 0 941 175 0 65 chr5 46045711 46045911 -153584239 + MLT1B LTR MaLR 1 187 -203 411 21 0 0 chr5 46048052 46048100 -153582050 + (TG)n Simple_repeat Simple_repeat 2 49 0 1509 180 10 13 chr5 46048449 46048754 -153581396 - L1MB3 LINE L1 -17 6166 5863 2162 170 21 45 chr5 46048782 46048906 -153581244 - L1MB3 LINE L1 -247 5936 5811 2053 121 0 33 chr5 46048906 46049211 -153580939 + AluSg SINE Alu 4 298 -12 2162 170 21 45 chr5 46049211 46049557 -153580593 - L1MB3 LINE L1 -372 5811 5477 1626 62 5 0 chr5 46049564 46049773 -153580377 - L1PA7 LINE L1 -1 6153 5944 1174 224 64 46 chr5 46049835 46050224 -153579926 + MSTD LTR MaLR 1 396 0 228 35 0 0 chr5 46051016 46051045 -153579105 + (TG)n Simple_repeat Simple_repeat 2 30 0 243 313 15 0 chr5 46051414 46051481 -153578669 + MIR SINE MIR 2 69 -193 1574 155 102 0 chr5 46051716 46051980 -153578170 + AluJb SINE Alu 1 291 -21 304 313 174 25 chr5 46053175 46053376 -153576774 + MIR SINE MIR 16 246 -16 22 70 0 0 chr5 46053628 46053671 -153576479 + AT_rich Low_complexity Low_complexity 1 43 0 1152 265 77 33 chr5 46053725 46053962 -153576188 + MER97c DNA MER1_type? 1 263 -827 183 42 0 0 chr5 46053962 46053986 -153576164 + (TG)n Simple_repeat Simple_repeat 1 24 0 1152 265 77 33 chr5 46053986 46054137 -153576013 + MER97c DNA MER1_type? 263 406 -684 557 311 66 55 chr5 46054932 46055279 -153574871 + MLT1L LTR MaLR 203 553 -62 1870 119 3 25 chr5 46055509 46055794 -153574356 - AluSx SINE Alu -32 280 2 2406 82 3 0 chr5 46056002 46056306 -153573844 - AluSc SINE Alu 0 309 5 212 284 171 11 chr5 46056506 46056594 -153573556 + L2 LINE L2 3170 3271 -1 197 336 112 8 chr5 46056668 46056802 -153573348 - L2 LINE L2 -507 2807 2660 7007 61 3 0 chr5 46056911 46058496 -153571654 + L1PA7 LINE L1 4566 6154 0 250 260 15 87 chr5 46059537 46059733 -153570417 - L1MCc LINE L1 -2636 4305 4124 848 184 12 86 chr5 46059762 46060007 -153570143 - L1MB8 LINE L1 -60 6118 5892 232 258 98 18 chr5 46060028 46060191 -153569959 - L1ME LINE L1 -5099 1832 1657 7661 28 0 0 chr5 46060269 46061196 -153568954 - L1PA3 LINE L1 -2 6153 5227 3076 257 82 29 chr5 46062601 46063730 -153566420 + L1MEc LINE L1 22 1209 -5187 973 286 57 25 chr5 46063732 46063972 -153566178 - L1MCc LINE L1 -4681 2441 2210 2169 132 3 0 chr5 46063972 46064283 -153565867 - AluSx SINE Alu 0 312 1 973 286 57 25 chr5 46064283 46064637 -153565513 - L1MCc LINE L1 -4912 2210 1828 273 139 46 37 chr5 46064656 46064764 -153565386 + (TTATA)n Simple_repeat Simple_repeat 3 111 0 833 293 64 14 chr5 46064802 46065217 -153564933 - L1MCc LINE L1 -4933 1490 1172 6483 170 31 11 chr5 46065241 46065403 -153564747 - L1MA8 LINE L1 -5 7307 7150 2467 61 3 0 chr5 46065403 46065699 -153564451 - AluY SINE Alu -9 302 6 6483 170 31 11 chr5 46065699 46067953 -153562197 - L1MA8 LINE L1 -162 7150 4843 995 262 40 45 chr5 46067947 46068684 -153561466 - L1MA8 LINE L1 -4784 2314 1561 * 321 374 12 18 chr5 46069261 46069424 -153560726 - L1MA8 LINE L1 -5967 1131 970 227 336 20 34 chr5 46069470 46069619 -153560531 - L1MCc LINE L1 -5279 1144 998 247 308 9 28 chr5 46069825 46069932 -153560218 - L1MCc LINE L1 -5347 1076 972 701 295 70 38 chr5 46070000 46070400 -153559750 - L1MCc LINE L1 -5987 436 24 202 141 28 42 chr5 46070447 46070518 -153559632 + (TA)n Simple_repeat Simple_repeat 2 71 0 2258 154 65 22 chr5 46070700 46071116 -153559034 - Tigger2a DNA MER2_type 0 434 1 680 129 0 0 chr5 46071142 46071243 -153558907 - HY3 scRNA scRNA 0 101 1 7576 35 0 0 chr5 46071910 46072835 -153557315 - L1PA4 LINE L1 -744 5402 4478 6001 43 28 0 chr5 46072835 46073584 -153556566 + L1PA4 LINE L1 5382 6154 -1 401 186 70 0 chr5 46076701 46076787 -153553363 - MSTD LTR MaLR 0 396 305 328 295 63 14 chr5 46076789 46076958 -153553192 - L1ME3A LINE L1 -318 5852 5676 462 272 52 0 chr5 46077520 46077656 -153552494 - L1ME3A LINE L1 -519 5643 5501 445 270 63 140 chr5 46077681 46078396 -153551754 + L1MC4 LINE L1 7098 7757 -285 375 23 0 0 chr5 46078481 46078525 -153551625 + (TG)n Simple_repeat Simple_repeat 2 45 0 491 187 23 14 chr5 46079210 46080683 -153549467 + L1P4 LINE L1 3985 5558 -608 1463 196 0 15 chr5 46080683 46080943 -153549207 + AluJb SINE Alu 14 269 -43 491 187 23 14 chr5 46080943 46081026 -153549124 + L1P4 LINE L1 5558 5639 -527 1587 246 58 51 chr5 46081156 46082279 -153547871 - L1MCc LINE L1 -4564 2377 1145 586 270 167 15 chr5 46082290 46082620 -153547530 - L1MCc LINE L1 -5930 493 114 227 311 47 28 chr5 46082792 46082898 -153547252 - MIR SINE MIR -94 168 61 488 141 0 0 chr5 46082945 46083030 -153547120 - L1MB2 LINE L1 -9 6162 6078 2676 164 5 5 chr5 46083070 46083496 -153546654 - MSTB LTR MaLR 0 426 1 8076 167 35 71 chr5 46083501 46084935 -153545215 - MSTB-int LTR MaLR -5 1646 205 577 117 0 0 chr5 46084935 46085012 -153545138 - AluS SINE Alu -234 79 3 8076 167 35 71 chr5 46085012 46085210 -153544940 - MSTB-int LTR MaLR -1446 205 1 2228 199 5 21 chr5 46085210 46085643 -153544507 - MSTB LTR MaLR 0 426 1 265 255 34 40 chr5 46085684 46085833 -153544317 - L1ME4a LINE L1 -32 6089 5942 249 373 108 7 chr5 46085884 46086163 -153543987 - L3 LINE CR1 -568 1009 703 973 255 5 0 chr5 46086742 46086946 -153543204 + MER63A DNA MER1_type 6 210 0 386 296 109 19 chr5 46088078 46088399 -153541751 - L1ME4a LINE L1 0 6121 5772 451 250 72 62 chr5 46088413 46088621 -153541529 + MER46C DNA MER2_type 1 210 -128 23 54 0 0 chr5 46088652 46088689 -153541461 + AT_rich Low_complexity Low_complexity 1 37 0 373 309 170 22 chr5 46088713 46088936 -153541214 - L1ME4a LINE L1 -365 5756 5501 23 0 0 0 chr5 46088942 46088965 -153541185 + AT_rich Low_complexity Low_complexity 1 23 0 212 171 0 0 chr5 46088981 46089022 -153541128 + T-rich Low_complexity Low_complexity 1 41 0 5932 70 37 6 chr5 46089032 46089847 -153540303 - L1PA5 LINE L1 -8 6146 5307 31 0 0 0 chr5 46089856 46089887 -153540263 + AT_rich Low_complexity Low_complexity 1 31 0 3764 78 0 2 chr5 46089993 46090495 -153539655 - L1PA7 LINE L1 0 6154 5654 28 29 0 0 chr5 46091122 46091157 -153538993 + AT_rich Low_complexity Low_complexity 1 35 0 1017 98 0 14 chr5 46091943 46092086 -153538064 - AluSg1 SINE Alu -168 141 1 275 339 50 41 chr5 46092273 46092491 -153537659 + L2 LINE L2 2550 2769 -545 306 325 111 0 chr5 46092895 46093021 -153537129 + MIR SINE MIR 31 170 -92 289 160 0 0 chr5 46094986 46095036 -153535114 - MADE1 DNA Mariner -30 50 1 5838 162 19 24 chr5 46095036 46096120 -153534030 - L1MCa LINE L1 -5328 1098 21 310 333 91 6 chr5 46096189 46096354 -153533796 + L1 LINE L1 2629 2807 -3339 27 29 0 0 chr5 46096671 46096705 -153533445 + AT_rich Low_complexity Low_complexity 1 34 0 301 320 140 81 chr5 46097562 46097834 -153532316 - L2 LINE L2 0 3272 2985 340 338 128 46 chr5 46098337 46099072 -153531078 + L2 LINE L2 675 1481 -1833 2262 72 3 0 chr5 46099072 46099363 -153530787 + AluSp SINE Alu 1 292 -21 340 338 128 46 chr5 46099363 46099425 -153530725 + L2 LINE L2 1481 1537 -1777 397 240 146 0 chr5 46100402 46100498 -153529652 - L2 LINE L2 -4 3309 3200 1314 170 32 3 chr5 46100572 46100855 -153529295 - L1MA9 LINE L1 0 6312 6022 2859 98 15 75 chr5 46100856 46101326 -153528824 - MLT2A1 LTR ERVL -2 442 1 35709 78 9 3 chr5 46101326 46105947 -153524203 - HERVL-A1 LTR ERVL 0 5654 1005 2014 84 14 3 chr5 46105947 46106296 -153523854 - HERVL-A1 LTR ERVL -4950 704 261 2164 62 11 0 chr5 46106346 46106621 -153523529 - HERVL-A1 LTR ERVL -5375 279 2 364 48 34 3 chr5 46106622 46106681 -153523469 - MLT2A1 LTR ERVL 0 444 390 209 132 26 0 chr5 46106681 46106719 -153523431 + (TA)n Simple_repeat Simple_repeat 2 40 0 238 241 23 0 chr5 46106732 46106819 -153523331 - L1MC4 LINE L1 -1340 6702 6614 2786 105 15 5 chr5 46106831 46107231 -153522919 - MLT2A1 LTR ERVL -40 404 1 2129 142 5 36 chr5 46107235 46107623 -153522527 - L1MA9 LINE L1 -296 6016 5641 305 86 0 69 chr5 46107623 46107674 -153522476 + L1PA16 LINE L1 6113 6166 0 4317 184 35 52 chr5 46107674 46108489 -153521661 - L1MA9 LINE L1 -798 5348 4521 276 30 0 0 chr5 46108489 46108522 -153521628 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 1878 144 0 7 chr5 46108522 46108806 -153521344 - AluSx SINE Alu -30 282 1 4317 184 35 52 chr5 46108806 46108980 -153521170 - L1MA9 LINE L1 -1624 4522 4377 1694 138 28 38 chr5 46108980 46109269 -153520881 - AluSx SINE Alu -26 286 1 4317 184 35 52 chr5 46109269 46109442 -153520708 - L1MA9 LINE L1 -1769 4377 4203 262 319 17 17 chr5 46109509 46109625 -153520525 + MIR SINE MIR 141 256 -6 223 96 27 55 chr5 46109935 46110008 -153520142 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 188 200 18 91 chr5 46110041 46110096 -153520054 + L2 LINE L2 3263 3313 0 206 326 43 35 chr5 46110347 46110488 -153519662 - MIR SINE MIR -61 201 60 233 386 114 19 chr5 46110519 46110729 -153519421 - MLT1K LTR MaLR -356 232 3 189 0 0 0 chr5 46110781 46110802 -153519348 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2042 46 11 0 chr5 46110807 46111067 -153519083 - L1PA5 LINE L1 -13 6141 5879 2706 54 0 0 chr5 46111067 46111399 -153518751 + L1PA5 LINE L1 5560 5891 -263 354 326 54 14 chr5 46112136 46112283 -153517867 - MIR3 SINE MIR -16 192 40 234 67 44 0 chr5 46114161 46114206 -153515944 - LTR66 LTR ERVL -170 440 394 243 141 14 28 chr5 46114206 46114277 -153515873 + (TA)n Simple_repeat Simple_repeat 2 71 0 941 175 0 65 chr5 46114298 46114498 -153515652 + MLT1B LTR MaLR 1 187 -203 429 20 0 0 chr5 46116639 46116689 -153513461 + (TG)n Simple_repeat Simple_repeat 2 51 0 1509 180 10 13 chr5 46117038 46117343 -153512807 - L1MB3 LINE L1 -17 6166 5863 2193 170 21 45 chr5 46117371 46117495 -153512655 - L1MB3 LINE L1 -247 5936 5811 2053 121 0 33 chr5 46117495 46117800 -153512350 + AluSg SINE Alu 4 298 -12 2193 170 21 45 chr5 46117800 46118146 -153512004 - L1MB3 LINE L1 -372 5811 5477 1614 62 5 0 chr5 46118153 46118362 -153511788 - L1PA7 LINE L1 -1 6153 5944 1151 224 64 46 chr5 46118424 46118813 -153511337 + MSTD LTR MaLR 1 396 0 228 35 0 0 chr5 46119599 46119628 -153510522 + (TG)n Simple_repeat Simple_repeat 2 30 0 239 313 15 0 chr5 46119997 46120064 -153510086 + MIR SINE MIR 2 69 -193 1545 155 102 0 chr5 46120299 46120563 -153509587 + AluJb SINE Alu 1 291 -21 302 313 174 25 chr5 46121758 46121959 -153508191 + MIR SINE MIR 16 246 -16 22 70 0 0 chr5 46122211 46122254 -153507896 + AT_rich Low_complexity Low_complexity 1 43 0 1187 268 77 31 chr5 46122308 46122545 -153507605 + MER97c DNA MER1_type? 1 264 -826 183 42 0 0 chr5 46122545 46122569 -153507581 + (TG)n Simple_repeat Simple_repeat 1 24 0 1187 268 77 31 chr5 46122569 46122719 -153507431 + MER97c DNA MER1_type? 264 406 -684 578 311 66 55 chr5 46123515 46123862 -153506288 + MLT1L LTR MaLR 203 553 -62 417 247 141 55 chr5 46123837 46124128 -153506022 - Charlie7 DNA MER1_type -188 2424 2109 * 207 0 0 0 chr5 46124671 46124694 -153505456 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 3069 153 22 13 chr5 46124710 46125265 -153504885 - L1PA16 LINE L1 0 6166 5607 207 198 41 41 chr5 46125359 46125480 -153504670 + (TATAA)n Simple_repeat Simple_repeat 3 123 0 388 320 201 8 chr5 46125570 46125814 -153504336 + L1M4 LINE L1 3628 3918 -2228 506 213 57 0 chr5 46126262 46126384 -153503766 + MER3 DNA MER1_type 41 122 -87 1104 181 122 0 chr5 46126393 46126680 -153503470 + MER3 DNA MER1_type 2264 2585 0 2105 119 3 28 chr5 46126680 46127000 -153503150 + AluSx SINE Alu 1 312 0 345 302 82 33 chr5 46127737 46127919 -153502231 - MLT1J LTR MaLR 0 511 321 308 214 34 34 chr5 46127982 46128071 -153502079 - MLT1J LTR MaLR -325 186 98 1363 335 118 25 chr5 46128119 46128882 -153501268 - L2 LINE L2 -218 3054 2220 17810 159 25 17 chr5 46131687 46137186 -153492964 - L1MA2 LINE L1 0 7723 2270 7835 32 0 1 chr5 46137186 46138893 -153491257 + L1PA4 LINE L1 4447 6152 -3 17810 159 25 17 chr5 46138893 46139331 -153490819 - L1MA2 LINE L1 -5453 2270 1837 387 0 0 0 chr5 46139331 46139374 -153490776 + (TG)n Simple_repeat Simple_repeat 2 44 0 17810 159 25 17 chr5 46139374 46140651 -153489499 - L1MA2 LINE L1 -5886 1837 459 7842 123 37 4 chr5 46140653 46142698 -153487452 - L1PA8 LINE L1 -6 6166 4051 2819 203 54 4 chr5 46142698 46143403 -153486747 - Charlie1 DNA MER1_type -715 2046 1 249 203 72 0 chr5 46143685 46143754 -153486396 + MER58B DNA MER1_type 127 326 -15 3482 161 20 2 chr5 46144689 46145281 -153484869 + LTR26 LTR ERV1 1 603 0 2247 160 28 14 chr5 46145746 46146183 -153483967 - L1MA3 LINE L1 -3 6302 5860 483 300 59 5 chr5 46146609 46146827 -153483323 + L2 LINE L2 2782 3009 -304 1583 208 185 55 chr5 46146891 46147421 -153482729 + MLT1E1 LTR MaLR 56 654 0 588 291 35 28 chr5 46147425 46147679 -153482471 + L2 LINE L2 3058 3313 0 33 43 0 0 chr5 46148886 46148933 -153481217 + AT_rich Low_complexity Low_complexity 1 47 0 24 0 0 0 chr5 46149271 46149295 -153480855 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr5 46149567 46149603 -153480547 + AT_rich Low_complexity Low_complexity 1 36 0 396 237 42 89 chr5 46149691 46149881 -153480269 - MER112 DNA MER1_type -25 235 55 421 320 103 0 chr5 46149983 46150186 -153479964 + MIR SINE MIR 10 233 -29 8535 241 61 10 chr5 46150591 46153303 -153476847 + L1M4 LINE L1 2402 5253 -893 192 152 0 0 chr5 46154100 46154133 -153476017 + GA-rich Low_complexity Low_complexity 4 36 0 836 255 51 56 chr5 46154292 46155019 -153475131 - L2 LINE L2 0 3313 2040 1416 258 63 7 chr5 46155185 46155630 -153474520 + L1PA12 LINE L1 1 470 -7111 * 5250 135 28 27 chr5 46155626 46156194 -153473956 + L1PA15 LINE L1 5200 5770 -395 1370 207 70 0 chr5 46156194 46156465 -153473685 + AluJb SINE Alu 3 292 -20 5250 135 28 27 chr5 46156465 46156861 -153473289 + L1PA15 LINE L1 5770 6164 -1 2693 154 56 33 chr5 46157025 46157506 -153472644 - Ricksha DNA DNA -1547 499 8 419 274 121 56 chr5 46160498 46160846 -153469304 - L2 LINE L2 0 3313 2854 3440 226 94 16 chr5 46161026 46161835 -153468315 + Charlie2a DNA MER1_type 1570 2505 -357 189 74 0 0 chr5 46161835 46161862 -153468288 + (TG)n Simple_repeat Simple_repeat 2 28 0 3440 226 94 16 chr5 46161862 46162250 -153467900 + Charlie2a DNA MER1_type 2505 2861 -1 26 0 0 0 chr5 46162939 46162965 -153467185 + AT_rich Low_complexity Low_complexity 1 26 0 871 112 16 0 chr5 46163591 46163716 -153466434 - AluSg/x SINE Alu -19 293 167 663 263 78 4 chr5 46163757 46164000 -153466150 - L1ME3 LINE L1 -42 6120 5860 1883 152 9 9 chr5 46164108 46164424 -153465726 - L1MB1 LINE L1 -162 6006 5691 750 152 38 0 chr5 46164426 46164558 -153465592 + L1MB1 LINE L1 6023 6159 -9 662 282 52 20 chr5 46164743 46164995 -153465155 + MLT1I LTR MaLR 147 406 -3 30 59 0 0 chr5 46165291 46165342 -153464808 + AT_rich Low_complexity Low_complexity 1 51 0 2077 91 21 3 chr5 46165480 46165765 -153464385 - AluSg SINE Alu -20 290 1 190 171 0 0 chr5 46166937 46166972 -153463178 - MIR SINE MIR -55 207 173 2740 215 54 39 chr5 46167165 46167979 -153462171 + LTR1B LTR ERV1 1 826 0 2143 130 12 6 chr5 46168029 46168375 -153461775 + L1PA14 LINE L1 5810 6157 -4 21 0 0 0 chr5 46169108 46169129 -153461021 + AT_rich Low_complexity Low_complexity 1 21 0 3074 179 89 32 chr5 46169290 46169434 -153460716 + L1MB1 LINE L1 4464 4598 -1570 2162 128 0 0 chr5 46169434 46169730 -153460420 + AluSg SINE Alu 1 296 -14 3074 179 89 32 chr5 46169730 46170970 -153459180 + L1MB1 LINE L1 4598 5933 -235 379 286 62 29 chr5 46171006 46171247 -153458903 - L1ME4a LINE L1 -155 5966 5718 471 233 27 48 chr5 46171285 46171431 -153458719 - MIR SINE MIR -7 255 113 241 288 0 15 chr5 46171747 46171813 -153458337 + MIR SINE MIR 194 258 -4 342 338 34 14 chr5 46171872 46172020 -153458130 - L1ME4a LINE L1 -1101 5045 4895 2632 164 72 8 chr5 46172095 46172582 -153457568 + MER44D DNA MER2_type 2 574 -31 420 20 0 0 chr5 46172593 46172642 -153457508 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr5 46172737 46172765 -153457385 + AT_rich Low_complexity Low_complexity 1 28 0 1312 137 13 4 chr5 46172765 46172992 -153457158 - L1MA5A LINE L1 -5 6292 6064 30 59 0 0 chr5 46173897 46173948 -153456202 + AT_rich Low_complexity Low_complexity 1 51 0 11619 177 44 15 chr5 46174322 46176445 -153453705 - L1MA3 LINE L1 0 6305 4025 902 15 23 30 chr5 46176445 46176578 -153453572 + (TTTC)n Simple_repeat Simple_repeat 2 133 0 11619 177 44 15 chr5 46176578 46178064 -153452086 - L1MA3 LINE L1 -2280 4025 2584 819 322 202 28 chr5 46178065 46178858 -153451292 - L2 LINE L2 -495 2819 1889 183 42 0 0 chr5 46179187 46179211 -153450939 + (TG)n Simple_repeat Simple_repeat 2 25 0 235 272 194 19 chr5 46179234 46179337 -153450813 - MER5B DNA MER1_type -6 172 52 2737 257 71 42 chr5 46180110 46180987 -153449163 + L1MB8 LINE L1 12 913 -5946 1865 177 36 8 chr5 46181012 46181374 -153448776 - MLT1B LTR MaLR -18 372 1 544 244 29 101 chr5 46181890 46182128 -153448022 + L1MB8 LINE L1 1205 1425 -5434 * 3129 249 94 17 chr5 46182121 46183424 -153446726 + L1MB8 LINE L1 3326 4728 -2229 1189 129 5 10 chr5 46183427 46183628 -153446522 - MER6 DNA MER2_type 0 865 666 4068 237 16 27 chr5 46183628 46184599 -153445551 + L1PA12 LINE L1 1 961 -6620 * 5384 148 30 29 chr5 46184598 46185600 -153444550 + L1P LINE L1 3319 4321 -1825 42161 38 22 1 chr5 46185606 46191620 -153438530 + L1PA3 LINE L1 13 6154 -1 1266 166 0 36 chr5 46191622 46191875 -153438275 + L1P LINE L1 4303 4546 -1600 * 4028 204 21 13 chr5 46191874 46192954 -153437196 + L1MB8 LINE L1 5897 6986 -3 186 279 103 29 chr5 46194978 46195046 -153435104 - MIR SINE MIR -110 98 26 307 264 40 56 chr5 46195992 46196117 -153434033 + MIR SINE MIR 74 196 -66 22 35 0 0 chr5 46196123 46196152 -153433998 + AT_rich Low_complexity Low_complexity 1 29 0 1813 120 3 14 chr5 46196157 46196440 -153433710 + AluSx SINE Alu 33 312 0 302 275 85 47 chr5 46196442 46196700 -153433450 + L1MC5 LINE L1 7650 7917 -44 1992 116 10 7 chr5 46196714 46196844 -153433306 + AluSg SINE Alu 1 129 -181 249 57 0 0 chr5 46196844 46196879 -153433271 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1992 116 10 7 chr5 46196879 46197040 -153433110 + AluSg SINE Alu 129 293 -17 264 114 0 0 chr5 46197433 46197468 -153432682 + MER92B LTR ERV1 1 35 -601 1412 146 0 24 chr5 46198759 46198972 -153431178 - AluJo SINE Alu -104 208 1 286 226 0 0 chr5 46199379 46199441 -153430709 + MER92C LTR ERV1 491 552 -2 431 238 173 28 chr5 46201348 46201562 -153428588 - MIR SINE MIR 0 262 18 1963 193 3 11 chr5 46202290 46202658 -153427492 - MLT1A1 LTR MaLR 0 365 1 221 311 40 27 chr5 46202835 46202909 -153427241 + L2 LINE L2 3198 3272 0 13616 193 30 18 chr5 46203130 46205902 -153424248 - L1M1 LINE L1 -486 6050 3255 1886 156 0 47 chr5 46205902 46206223 -153423927 - AluSx SINE Alu -6 306 1 13616 193 30 18 chr5 46206223 46207298 -153422852 - L1M1 LINE L1 -3281 3255 2195 10717 241 58 30 chr5 46207299 46207905 -153422245 - L1P4 LINE L1 -531 7054 6467 4061 98 6 44 chr5 46207905 46208535 -153421615 + LTR14B LTR ERVK 3 608 0 10717 241 58 30 chr5 46208535 46208980 -153421170 - L1P4 LINE L1 -1118 6467 6036 2409 136 8 0 chr5 46208980 46209348 -153420802 + THE1C LTR MaLR 1 371 -4 9327 119 40 45 chr5 46209352 46210941 -153419209 + THE1C-int LTR MaLR 1 1580 0 1860 137 99 9 chr5 46210941 46211285 -153418865 + THE1C LTR MaLR 1 375 0 10717 241 58 30 chr5 46211285 46213358 -153416792 - L1P4 LINE L1 -1551 6034 4021 2158 120 0 13 chr5 46213358 46213659 -153416491 - AluSg SINE Alu -13 297 1 10717 241 58 30 chr5 46213659 46215133 -153415017 - L1P4 LINE L1 -3564 4021 1898 580 296 80 72 chr5 46215613 46216015 -153414135 - L1M1 LINE L1 -5537 766 362 543 298 152 21 chr5 46216053 46216435 -153413715 - L1MEd LINE L1 -5666 453 22 38 85 0 0 chr5 46216575 46216669 -153413481 + AT_rich Low_complexity Low_complexity 1 94 0 206 363 55 0 chr5 46216723 46216814 -153413336 + L2 LINE L2 3175 3270 -2 4115 204 31 45 chr5 46217093 46217260 -153412890 + MST-int LTR MaLR 45 213 -1438 3229 102 29 20 chr5 46217260 46217748 -153412402 + LTR22B LTR ERVK 1 492 0 4115 204 31 45 chr5 46217748 46218539 -153411611 + MST-int LTR MaLR 213 990 -661 304 211 0 0 chr5 46218546 46218603 -153411547 + MSTB1 LTR MaLR 327 383 -49 330 336 111 61 chr5 46218885 46219227 -153410923 + L2 LINE L2 2912 3270 -2 7929 111 11 19 chr5 46219272 46222230 -153407920 + HERV9 LTR ERV1 1 2468 0 * 15861 76 4 8 chr5 46222230 46224425 -153405725 + HERV9 LTR ERV1 2758 4944 -3455 783 162 46 46 chr5 46224426 46224728 -153405422 + HERV9 LTR ERV1 840 1141 -5755 278 226 0 0 chr5 46224726 46224788 -153405362 + HERV9 LTR ERV1 7503 7564 -835 * 4266 93 2 2 chr5 46224784 46225394 -153404756 + HERV9 LTR ERV1 7789 8398 -1 2811 82 181 145 chr5 46225395 46226062 -153404088 + LTR12 LTR ERV1 1 691 -23 26 74 0 0 chr5 46227344 46227398 -153402752 + AT_rich Low_complexity Low_complexity 1 54 0 22 0 0 0 chr5 46229441 46229463 -153400687 + AT_rich Low_complexity Low_complexity 1 22 0 624 213 51 41 chr5 46229691 46229888 -153400262 - LTR16A1 LTR ERVL -11 446 248 1244 329 87 30 chr5 46230520 46231780 -153398370 - HERVL LTR ERVL -699 4955 3624 399 296 52 34 chr5 46231829 46232062 -153398088 - HERVL LTR ERVL -2430 2566 2330 1360 144 34 58 chr5 46232076 46232572 -153397578 - MSTA LTR MaLR 0 428 1 346 342 0 0 chr5 46232572 46232689 -153397461 - HERVL LTR ERVL -3513 2251 2135 1752 132 149 14 chr5 46232716 46233080 -153397070 - MSTA LTR MaLR -15 413 1 250 356 30 0 chr5 46233107 46233239 -153396911 - HERVL LTR ERVL -2996 2000 1865 720 336 54 44 chr5 46233268 46233950 -153396200 - HERVL LTR ERVL -4207 789 101 2314 92 10 79 chr5 46233999 46234390 -153395760 + THE1B LTR MaLR 1 364 0 1365 263 38 8 chr5 46234462 46234858 -153395292 - LTR16A1 LTR ERVL -6 451 44 310 291 31 13 chr5 46235029 46235203 -153394947 + MLT1I LTR MaLR 244 409 0 372 312 64 9 chr5 46235243 46235352 -153394798 - MIR SINE MIR -57 151 37 451 317 32 0 chr5 46235451 46235574 -153394576 - L2 LINE L2 0 3313 3187 238 381 24 0 chr5 46236143 46236227 -153393923 - L2 LINE L2 -53 3219 3134 260 219 14 14 chr5 46236364 46236437 -153393713 + HsTC2 DNA Tc2 13 85 -1813 274 153 83 28 chr5 46236542 46236614 -153393536 + HsTC2 DNA Tc2 1808 1883 -15 405 0 0 0 chr5 46237233 46237278 -153392872 + (TG)n Simple_repeat Simple_repeat 2 46 0 226 158 79 13 chr5 46238223 46238299 -153391851 - Charlie5 DNA MER1_type -119 2493 2413 22 0 0 0 chr5 46238300 46238322 -153391828 + AT_rich Low_complexity Low_complexity 1 22 0 1521 207 42 8 chr5 46238385 46238623 -153391527 + L1M3 LINE L1 4989 5217 -951 2099 106 0 3 chr5 46238623 46238906 -153391244 + AluSg SINE Alu 29 310 0 1521 207 42 8 chr5 46238906 46239274 -153390876 + L1M3 LINE L1 5217 5606 -562 641 220 58 95 chr5 46239291 46239586 -153390564 + L1M1 LINE L1 681 964 -6245 1452 200 129 0 chr5 46239587 46239952 -153390198 - MSTB1 LTR MaLR -20 412 1 9185 206 31 17 chr5 46239975 46241572 -153388578 + L1M1 LINE L1 1189 2831 -4377 288 0 0 0 chr5 46241572 46241604 -153388546 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 9185 206 31 17 chr5 46241604 46242629 -153387521 + L1M1 LINE L1 2831 3841 -3367 356 83 0 0 chr5 46242631 46242679 -153387471 - L1PA16 LINE L1 -221 5945 5898 1258 111 10 30 chr5 46242679 46242876 -153387274 + L1PA16 LINE L1 5973 6166 0 11228 181 22 17 chr5 46243127 46244567 -153385583 + L1M1 LINE L1 3823 5290 -2075 2413 74 0 0 chr5 46244567 46244864 -153385286 - AluY SINE Alu -13 298 2 11228 181 22 17 chr5 46244864 46246227 -153383923 + L1M1 LINE L1 5290 6645 -720 1351 153 52 64 chr5 46246254 46246580 -153383570 - LTR1 LTR ERV1 -463 322 1 2408 68 10 0 chr5 46248314 46248622 -153381528 + AluY SINE Alu 1 311 0 1937 118 7 7 chr5 46248925 46249220 -153380930 + AluSp SINE Alu 27 313 0 25 0 0 0 chr5 46249564 46249589 -153380561 + AT_rich Low_complexity Low_complexity 1 25 0 2426 55 0 3 chr5 46250030 46250320 -153379830 + AluY SINE Alu 6 294 -17 4520 208 36 7 chr5 46250743 46252019 -153378131 + L1MC2 LINE L1 5023 6331 -13 25 0 0 0 chr5 46252019 46252044 -153378106 + AT_rich Low_complexity Low_complexity 1 25 0 372 328 23 8 chr5 46252121 46252252 -153377898 + MIR3 SINE MIR 12 144 -64 1953 126 3 14 chr5 46252366 46252684 -153377466 - AluSx SINE Alu 0 315 1 29 0 0 0 chr5 46253456 46253485 -153376665 + AT_rich Low_complexity Low_complexity 1 29 0 1406 218 100 52 chr5 46253527 46254009 -153376141 - MLT1D LTR MaLR 0 505 1 241 241 52 78 chr5 46255144 46255295 -153374855 - MER5A DNA MER1_type -10 179 26 1984 142 7 10 chr5 46255898 46256208 -153373942 + AluSg SINE Alu 1 309 -1 1778 160 144 8 chr5 46256355 46256730 -153373420 + MSTA LTR MaLR 3 428 0 8791 149 11 35 chr5 46256732 46258343 -153371807 + MSTA-int LTR MaLR 3 1574 -6 1723 151 133 18 chr5 46258353 46258669 -153371481 + MSTA LTR MaLR 1 370 -58 6208 89 0 0 chr5 46258669 46259744 -153370406 - L1PA10 LINE L1 0 6168 5094 1723 151 133 18 chr5 46259744 46259811 -153370339 + MSTA LTR MaLR 370 428 0 195 280 20 0 chr5 46259951 46260001 -153370149 - MER5A DNA MER1_type -135 54 4 24 0 0 0 chr5 46260073 46260097 -153370053 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr5 46261895 46261932 -153368218 + AT_rich Low_complexity Low_complexity 1 37 0 293 278 41 0 chr5 46261965 46262062 -153368088 + L1ME LINE L1 5650 5750 -371 35 0 0 0 chr5 46262198 46262233 -153367917 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 27 40 chr5 46262370 46262670 -153367480 + AluJb SINE Alu 1 296 -16 1038 179 80 19 chr5 46262670 46262983 -153367167 - L1M4 LINE L1 -841 5305 4974 565 229 0 47 chr5 46262981 46263173 -153366977 - L1MC4 LINE L1 -410 7632 7450 * 553 266 115 49 chr5 46263200 46263505 -153366645 - L1MC4a LINE L1 -1208 6600 6276 196 100 140 20 chr5 46263541 46263641 -153366509 + (TTTAA)n Simple_repeat Simple_repeat 5 116 0 1401 247 32 66 chr5 46263790 46264348 -153365802 - L1MC4a LINE L1 -1756 6052 5514 2006 137 0 0 chr5 46264430 46264739 -153365411 - AluSx SINE Alu 0 313 5 479 296 84 64 chr5 46267236 46267689 -153362461 + L2 LINE L2 2326 2787 -527 351 382 85 20 chr5 46267830 46268029 -153362121 + L2 LINE L2 2989 3200 -72 1630 247 87 54 chr5 46268129 46268201 -153361949 - L1ME2 LINE L1 -13 6220 6152 1634 174 7 7 chr5 46268201 46268483 -153361667 + AluJo SINE Alu 1 282 -30 1630 247 87 54 chr5 46268483 46268499 -153361651 - L1ME2 LINE L1 -81 6152 6138 472 88 12 12 chr5 46268499 46268579 -153361571 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 1630 247 87 54 chr5 46268579 46269096 -153361054 - L1ME2 LINE L1 -95 6138 5640 270 0 0 0 chr5 46269096 46269126 -153361024 + (ATG)n Simple_repeat Simple_repeat 2 31 0 2191 95 0 11 chr5 46269131 46269416 -153360734 - AluSc SINE Alu -27 282 1 1630 247 87 54 chr5 46269416 46269840 -153360310 - L1ME2 LINE L1 -596 5637 5228 2136 110 0 31 chr5 46269840 46270157 -153359993 - AluSq SINE Alu -6 307 1 1630 247 87 54 chr5 46270157 46270670 -153359480 - L1ME2 LINE L1 -1005 5228 4508 1837 156 3 6 chr5 46270675 46270995 -153359155 - L1MA4A LINE L1 -5 6298 5980 2753 177 74 30 chr5 46271021 46273352 -153356798 - L1MA4A LINE L1 -467 5836 3247 398 342 38 6 chr5 46273353 46273511 -153356639 + MLT2F LTR ERVL 288 450 -213 1354 262 68 12 chr5 46273511 46273999 -153356151 - L1ME2 LINE L1 -3168 3047 2533 225 94 0 0 chr5 46273999 46274031 -153356119 + (T)n Simple_repeat Simple_repeat 1 32 0 6451 14 1 0 chr5 46274031 46274769 -153355381 - L1HS LINE L1 0 6155 5417 8735 17 0 0 chr5 46274770 46275833 -153354317 + L1P1 LINE L1 4370 5432 -723 1065 247 48 8 chr5 46275826 46276356 -153353794 - L1ME2 LINE L1 -3670 2545 1996 * 207 349 12 12 chr5 46277187 46277273 -153352877 + L2 LINE L2 3220 3305 -8 730 307 99 19 chr5 46278370 46278732 -153351418 + L2 LINE L2 2923 3313 0 198 301 43 32 chr5 46279837 46279930 -153350220 + MIR3 SINE MIR 106 199 -9 25 31 0 0 chr5 46280167 46280199 -153349951 + AT_rich Low_complexity Low_complexity 1 32 0 7465 33 0 1 chr5 46280263 46281163 -153348987 - L1PA4 LINE L1 -3 6152 5254 1813 36 0 0 chr5 46281168 46281393 -153348757 + L1P LINE L1 4996 5220 -926 221 167 19 0 chr5 46281887 46281941 -153348209 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 315 300 133 0 chr5 46283039 46283159 -153346991 + MIR3 SINE MIR 15 150 -58 1092 166 6 6 chr5 46283233 46283414 -153346736 - MSTC LTR MaLR -2 426 246 1742 144 45 51 chr5 46284257 46284303 -153345847 - THE1C LTR MaLR 0 375 330 1864 130 7 24 chr5 46284303 46284595 -153345555 + AluSx SINE Alu 7 293 -19 1742 144 45 51 chr5 46284595 46284922 -153345228 - THE1C LTR MaLR -45 330 4 8974 123 84 8 chr5 46284925 46286394 -153343756 - THE1C-int LTR MaLR 0 1580 1 2347 131 11 8 chr5 46286394 46286768 -153343382 - THE1C LTR MaLR 0 375 1 2324 87 3 0 chr5 46287355 46287665 -153342485 - AluY SINE Alu 0 311 1 3437 73 7 0 chr5 46288086 46288539 -153341611 + L1PA8 LINE L1 5708 6163 -9 5322 156 38 26 chr5 46288671 46288744 -153341406 + L1MC2 LINE L1 5289 5360 -984 594 76 0 0 chr5 46288744 46288823 -153341327 + MADE1 DNA Mariner 2 80 0 5322 156 38 26 chr5 46288823 46289791 -153340359 + L1MC2 LINE L1 5360 6343 -1 22 0 0 0 chr5 46290117 46290139 -153340011 + AT_rich Low_complexity Low_complexity 1 22 0 342 314 99 52 chr5 46290249 46290612 -153339538 - L1M4 LINE L1 -3006 3140 2761 2186 159 12 56 chr5 46290656 46291070 -153339080 + L1M1 LINE L1 10 405 -7160 206 340 0 0 chr5 46291236 46291339 -153338811 + T-rich Low_complexity Low_complexity 1 103 0 567 309 124 0 chr5 46292087 46292304 -153337846 - MIR SINE MIR -12 250 7 502 320 11 56 chr5 46292885 46293063 -153337087 - MIR3 SINE MIR -7 201 32 653 294 65 17 chr5 46293970 46294201 -153335949 + MIR SINE MIR 8 249 -13 833 281 53 4 chr5 46294888 46295116 -153335034 + MIR SINE MIR 3 241 -21 1612 243 49 20 chr5 46296242 46296691 -153333459 + MLT1C LTR MaLR 6 467 0 286 136 11 171 chr5 46297134 46297172 -153332978 + MIR SINE MIR 164 182 -80 2007 136 7 0 chr5 46297172 46297466 -153332684 + AluSx SINE Alu 1 296 -16 286 136 11 171 chr5 46297466 46297515 -153332635 + MIR SINE MIR 182 237 -25 1642 188 0 0 chr5 46298809 46299122 -153331028 + AluJb SINE Alu 1 313 0 537 230 0 18 chr5 46299675 46299788 -153330362 + LTR33 LTR ERVL 402 512 -9 1825 156 146 13 chr5 46300190 46300568 -153329582 - MSTA LTR MaLR 0 428 1 525 345 36 16 chr5 46300942 46301194 -153328956 - MIR SINE MIR -1 261 5 29 28 0 0 chr5 46301456 46301492 -153328658 + AT_rich Low_complexity Low_complexity 1 36 0 1606 135 17 10 chr5 46302177 46302473 -153327677 + AluY SINE Alu 1 298 -13 419 262 33 43 chr5 46302854 46303042 -153327108 - MIR SINE MIR 0 262 78 2163 142 94 8 chr5 46305229 46305623 -153324527 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr5 46306029 46306059 -153324091 + AT_rich Low_complexity Low_complexity 1 30 0 301 336 84 8 chr5 46306306 46306437 -153323713 + MIR3 SINE MIR 41 181 -27 1395 203 65 4 chr5 46306437 46306713 -153323437 - AluJo SINE Alu -9 293 1 562 231 145 32 chr5 46306881 46307102 -153323048 + L1ME3A LINE L1 5711 5956 -214 401 239 8 0 chr5 46307158 46307275 -153322875 + (TA)n Simple_repeat Simple_repeat 2 119 0 203 432 20 7 chr5 46308635 46308783 -153321367 + MIR3 SINE MIR 40 189 -19 21 36 0 0 chr5 46308808 46308836 -153321314 + AT_rich Low_complexity Low_complexity 1 28 0 355 325 85 48 chr5 46308980 46309334 -153320816 - MLT1J2 LTR MaLR -2 448 82 22 0 0 0 chr5 46309919 46309941 -153320209 + AT_rich Low_complexity Low_complexity 1 22 0 789 231 35 15 chr5 46309981 46310016 -153320134 - MLT2B3 LTR ERVL 0 554 521 473 71 14 0 chr5 46310016 46310086 -153320064 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 789 231 35 15 chr5 46310086 46310249 -153319901 - MLT2B3 LTR ERVL -33 521 352 216 0 0 0 chr5 46310859 46310883 -153319267 + (TTC)n Simple_repeat Simple_repeat 1 24 0 342 0 0 0 chr5 46310883 46310921 -153319229 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1853 86 4 0 chr5 46310922 46311177 -153318973 - L1PA6 LINE L1 -17 6137 5882 1466 224 70 6 chr5 46311478 46311821 -153318329 + MLT1A1 LTR MaLR 1 365 0 448 348 114 45 chr5 46312233 46312923 -153317227 + L1MEc LINE L1 45 782 -5614 892 244 103 55 chr5 46312941 46313487 -153316663 + L1MEc LINE L1 1914 2485 -3911 3830 260 88 38 chr5 46313491 46315388 -153314762 + L1MEc LINE L1 2547 4538 -1677 207 0 0 0 chr5 46315393 46315416 -153314734 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 6749 136 18 13 chr5 46315431 46317028 -153313122 - L1MA1 LINE L1 0 7721 6116 5424 34 3 11 chr5 46317050 46317707 -153312443 - L1PA4 LINE L1 -49 6106 5455 * 5718 32 1 0 chr5 46317701 46318397 -153311753 + L1P LINE L1 4707 5403 -743 8698 171 18 9 chr5 46318420 46319728 -153310422 - L1MA1 LINE L1 -1447 6118 4823 1863 101 45 0 chr5 46319728 46320014 -153310136 - L1PA13 LINE L1 -5 6158 5860 8698 171 18 9 chr5 46320014 46322436 -153307714 - L1MA1 LINE L1 -2742 4823 2348 319 264 40 56 chr5 46325577 46325702 -153304448 + MIR SINE MIR 74 196 -66 22 35 0 0 chr5 46325708 46325737 -153304413 + AT_rich Low_complexity Low_complexity 1 29 0 1783 120 3 14 chr5 46325742 46326025 -153304125 + AluSx SINE Alu 33 312 0 325 275 85 47 chr5 46326027 46326285 -153303865 + L1MC5 LINE L1 7650 7917 -44 910 92 0 15 chr5 46326299 46326430 -153303720 + AluSg SINE Alu 1 129 -181 1393 146 0 24 chr5 46327499 46327712 -153302438 - AluJo SINE Alu -104 208 1 289 226 0 0 chr5 46328118 46328180 -153301970 + MER92C LTR ERV1 491 552 -2 322 211 187 16 chr5 46330087 46330210 -153299940 - MIR SINE MIR 0 262 119 37 23 0 0 chr5 46430737 46430781 -153199369 + AT_rich Low_complexity Low_complexity 1 44 0 2189 93 21 0 chr5 46431802 46432093 -153198057 - AluSx SINE Alu -15 297 1 475 257 18 9 chr5 46432148 46432261 -153197889 - MER81 DNA DNA 0 114 1 27 29 0 0 chr5 46432638 46432672 -153197478 + AT_rich Low_complexity Low_complexity 1 34 0 306 301 96 19 chr5 46433623 46433779 -153196371 + Charlie8 DNA MER1_type 96 263 -2154 312 317 103 78 chr5 46434083 46434259 -153195891 + MIR SINE MIR 4 192 -70 1011 219 33 5 chr5 46434259 46434474 -153195676 - MER58A DNA MER1_type 0 224 4 312 317 103 78 chr5 46434474 46434547 -153195603 + MIR SINE MIR 192 262 0 1261 167 65 58 chr5 46434909 46435202 -153194948 + AluJo SINE Alu 1 295 -17 21 57 0 0 chr5 46436130 46436165 -153193985 + AT_rich Low_complexity Low_complexity 1 35 0 2180 99 0 10 chr5 46438803 46439105 -153191045 - AluSc SINE Alu -10 299 1 238 364 45 40 chr5 46441459 46441657 -153188493 + L2 LINE L2 2890 3088 -184 416 226 113 15 chr5 46441771 46441904 -153188246 - MER103 DNA DNA 0 166 21 355 317 49 38 chr5 46442787 46442970 -153187180 - MIR SINE MIR -50 212 28 576 239 101 32 chr5 46443193 46443381 -153186769 + MER63A DNA MER1_type 10 210 0 1117 232 24 4 chr5 46443445 46443695 -153186455 - MIR SINE MIR -5 257 3 190 310 161 0 chr5 46444622 46444709 -153185441 - L2 LINE L2 -16 3297 3197 1690 330 59 31 chr5 46444930 46445725 -153184425 - ERVL LTR ERVL -2046 3718 2902 250 175 70 0 chr5 46445934 46445991 -153184159 - MLT1K LTR MaLR -16 572 512 354 45 0 0 chr5 46446129 46446173 -153183977 + (TC)n Simple_repeat Simple_repeat 1 44 0 2396 86 0 0 chr5 46447726 46448027 -153182123 + AluY SINE Alu 1 301 -10 407 348 63 46 chr5 46448753 46449339 -153180811 - L1M4 LINE L1 -2872 3274 2679 1488 169 75 0 chr5 46449343 46449610 -153180540 + AluJb SINE Alu 3 289 -23 22 35 0 0 chr5 46451201 46451230 -153178920 + AT_rich Low_complexity Low_complexity 1 29 0 909 247 46 5 chr5 46451451 46451670 -153178480 - LTR16A LTR ERVL -24 426 199 237 316 13 13 chr5 46451699 46451778 -153178372 + L1MC/D LINE L1 5556 5634 -2174 991 170 77 142 chr5 46451818 46452235 -153177915 + MLT1B LTR MaLR 1 390 0 403 279 183 46 chr5 46452382 46452579 -153177571 - MIR SINE MIR 0 262 39 42731 31 23 3 chr5 46452584 46458615 -153171535 + L1PA2 LINE L1 1 6152 -3 30 0 0 0 chr5 46458615 46458645 -153171505 + AT_rich Low_complexity Low_complexity 1 30 0 211 189 0 0 chr5 46458709 46458746 -153171404 + GA-rich Low_complexity Low_complexity 2 38 0 1329 163 10 120 chr5 46458825 46459147 -153171003 + MLT2B3 LTR ERVL 1 292 -223 429 366 100 32 chr5 46459153 46459533 -153170617 + L2 LINE L2 2867 3272 0 1513 304 41 4 chr5 46459560 46460073 -153170077 + MLT1H1 LTR MaLR 24 555 0 5568 38 7 1 chr5 46460852 46462007 -153168143 + L1PA5 LINE L1 4706 5867 -287 2295 66 7 0 chr5 46462107 46462410 -153167740 + L1PA5 LINE L1 5847 6151 -3 27 0 0 0 chr5 46462410 46462437 -153167713 + AT_rich Low_complexity Low_complexity 1 27 0 686 193 88 58 chr5 46463736 46463788 -153166362 + MER45A DNA AcHobo 1 50 -1531 1749 173 33 44 chr5 46463788 46464153 -153165997 - MLT1A1 LTR MaLR 0 365 5 686 193 88 58 chr5 46464153 46464271 -153165879 + MER45A DNA AcHobo 50 176 -2 24 67 0 0 chr5 46464753 46464798 -153165352 + AT_rich Low_complexity Low_complexity 1 45 0 264 100 0 0 chr5 46466625 46466665 -153163485 + (CA)n Simple_repeat Simple_repeat 2 41 0 3328 62 14 2 chr5 46467624 46468058 -153162092 - L1PA7 LINE L1 -1 6153 5715 1452 282 56 41 chr5 46468369 46468554 -153161596 + MLT1H LTR MaLR 3 184 -365 3517 141 15 0 chr5 46468554 46469073 -153161077 + MER1A DNA MER1_type 1 527 0 1452 282 56 41 chr5 46469073 46469426 -153160724 + MLT1H LTR MaLR 184 549 0 404 277 20 0 chr5 46469536 46469637 -153160513 - MIR SINE MIR -113 149 47 2075 120 0 27 chr5 46470464 46470765 -153159385 - AluSx SINE Alu -19 293 1 390 308 127 11 chr5 46470849 46471125 -153159025 + L2 LINE L2 3006 3313 0 516 263 163 0 chr5 46471198 46471358 -153158792 - MER5A DNA MER1_type 0 189 4 22 0 0 0 chr5 46472439 46472461 -153157689 + AT_rich Low_complexity Low_complexity 1 22 0 640 181 9 0 chr5 46472490 46472606 -153157544 - L1PA16 LINE L1 -4 6162 6046 329 266 64 11 chr5 46472921 46473015 -153157135 + L1MC4 LINE L1 6616 6714 -1328 270 0 0 0 chr5 46473208 46473238 -153156912 + (CATA)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr5 46473248 46473268 -153156882 + (TG)n Simple_repeat Simple_repeat 2 21 0 180 0 0 0 chr5 46473267 46473287 -153156863 + (TA)n Simple_repeat Simple_repeat 1 20 0 647 258 68 60 chr5 46473883 46473988 -153156162 - MIR SINE MIR -2 260 157 2142 87 7 7 chr5 46473988 46474287 -153155863 - AluSx SINE Alu -12 300 2 647 258 68 60 chr5 46474287 46474433 -153155717 - MIR SINE MIR -105 157 7 2209 180 86 36 chr5 46477449 46477971 -153152179 + MER44D DNA MER2_type 2 604 -1 2467 59 0 0 chr5 46477995 46478298 -153151852 + AluY SINE Alu 1 303 -8 207 102 20 82 chr5 46478615 46478664 -153151486 + (TTTTC)n Simple_repeat Simple_repeat 1 46 0 676 225 28 60 chr5 46478899 46479148 -153151002 + L1MC5 LINE L1 7644 7884 -77 452 234 34 63 chr5 46479226 46479303 -153150847 + L1MC3 LINE L1 5750 5828 -1980 2065 126 3 3 chr5 46479303 46479605 -153150545 + AluSx SINE Alu 1 302 -10 452 234 34 63 chr5 46479605 46479702 -153150448 + L1MC3 LINE L1 5828 5919 -1889 1938 133 38 22 chr5 46479906 46480282 -153149868 - Tigger3(Golem) DNA MER2_type -1 3028 1 262 302 32 79 chr5 46480637 46480763 -153149387 - MIR SINE MIR -64 198 79 3724 178 72 41 chr5 46480912 46481745 -153148405 + L1MC3 LINE L1 6637 7495 -290 980 109 97 11 chr5 46481917 46482092 -153148058 - L1MC2 LINE L1 -6 6338 6149 1512 96 0 0 chr5 46482098 46482296 -153147854 + AluSg SINE Alu 3 200 -110 10495 127 10 3 chr5 46482302 46485028 -153145122 + L1MA1 LINE L1 3553 6299 -3 207 308 13 13 chr5 46485297 46485375 -153144775 - MIR SINE MIR -37 225 148 189 0 0 0 chr5 46485527 46485548 -153144602 + (CAA)n Simple_repeat Simple_repeat 1 21 0 227 374 10 0 chr5 46485808 46485907 -153144243 + L2 LINE L2 3166 3265 -7 370 317 17 8 chr5 46486273 46486393 -153143757 - L2 LINE L2 -6 3307 3187 1736 112 8 4 chr5 46487032 46487281 -153142869 + AluSx SINE Alu 47 296 -16 23 68 0 0 chr5 46487325 46487369 -153142781 + AT_rich Low_complexity Low_complexity 1 44 0 962 169 0 7 chr5 46487369 46487523 -153142627 - FRAM SINE Alu -24 152 1 26 0 0 0 chr5 46487523 46487549 -153142601 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr5 46487584 46487613 -153142537 + AT_rich Low_complexity Low_complexity 1 29 0 202 314 0 0 chr5 46488226 46488277 -153141873 + L3 LINE CR1 1503 1553 -24 2988 182 81 22 chr5 46488483 46489174 -153140976 - L1 LINE L1 -1321 4825 4094 4638 203 28 40 chr5 46489177 46490411 -153139739 + L1 LINE L1 2869 4087 -2059 1625 87 0 18 chr5 46490469 46490688 -153139462 + AluSc SINE Alu 85 299 -10 1273 267 79 35 chr5 46491303 46491820 -153138330 + Charlie7 DNA MER1_type 35 574 -2038 411 249 168 0 chr5 46491821 46491994 -153138156 + Charlie7 DNA MER1_type 1769 1970 -642 3843 185 64 28 chr5 46492003 46495283 -153134867 + L1MCa LINE L1 29 3616 -2810 1567 116 4 0 chr5 46495283 46495515 -153134635 + AluSq SINE Alu 81 313 0 3843 185 64 28 chr5 46495515 46495617 -153134533 + L1MCa LINE L1 3616 3713 -2713 190 265 143 20 chr5 46495945 46496043 -153134107 + L2 LINE L2 2615 2724 -590 470 371 78 47 chr5 46496579 46497396 -153132754 + L2 LINE L2 2428 3272 0 357 24 0 0 chr5 46499574 46499616 -153130534 + (CA)n Simple_repeat Simple_repeat 1 42 0 1590 119 16 129 chr5 46500506 46500892 -153129258 + L1MA8 LINE L1 5945 6286 -5 2356 58 0 14 chr5 46500898 46501193 -153128957 - AluY SINE Alu -20 291 1 33 56 0 0 chr5 46501193 46501247 -153128903 + AT_rich Low_complexity Low_complexity 1 54 0 35 0 0 0 chr5 46501456 46501491 -153128659 + AT_rich Low_complexity Low_complexity 1 35 0 10585 215 19 31 chr5 46501623 46504299 -153125851 - L1PA16 LINE L1 -16 6853 4236 189 0 0 0 chr5 46504299 46504320 -153125830 + (TTG)n Simple_repeat Simple_repeat 1 21 0 10585 215 19 31 chr5 46504320 46505270 -153124880 - L1PA16 LINE L1 -2633 4236 3276 1159 194 7 21 chr5 46505240 46505529 -153124621 - L1PA16 LINE L1 -4709 2140 1856 * 1999 219 45 40 chr5 46505523 46506352 -153123798 - L1PA15-16 LINE L1 -3583 2563 1772 774 201 6 52 chr5 46506343 46506517 -153123633 + L1PA15-16 LINE L1 2377 2542 -4307 * 560 151 0 0 chr5 46506517 46506603 -153123547 - AluS SINE Alu -225 88 3 846 227 98 4 chr5 46506608 46506885 -153123265 - L1M4 LINE L1 -776 5370 5068 353 426 52 28 chr5 46506941 46507441 -153122709 - L1M2 LINE L1 -6318 531 20 659 157 0 0 chr5 46507441 46507543 -153122607 - AluS SINE Alu -211 102 1 32 43 0 0 chr5 46507667 46507713 -153122437 + AT_rich Low_complexity Low_complexity 1 46 0 1285 238 66 3 chr5 46507852 46508231 -153121919 + L1ME1 LINE L1 4968 5370 -776 603 90 0 11 chr5 46508234 46508323 -153121827 + AluS SINE Alu 1 88 -225 940 196 91 9 chr5 46508325 46508545 -153121605 + L1ME1 LINE L1 5357 5594 -572 842 281 63 28 chr5 46508550 46508835 -153121315 - LTR16B LTR ERVL 0 464 170 319 224 0 0 chr5 46508982 46509040 -153121110 - LTR16B LTR ERVL -406 58 1 495 324 0 7 chr5 46509154 46509299 -153120851 - HERV16 LTR ERVL -3188 1808 1665 3384 325 54 23 chr5 46509335 46510783 -153119367 - HERV16 LTR ERVL -3462 1534 42 253 229 0 0 chr5 46510797 46510845 -153119305 - LTR16B LTR ERVL 0 464 417 561 301 62 0 chr5 46510845 46511021 -153119129 - LTR16B LTR ERVL -277 187 1 2263 222 55 6 chr5 46511027 46511553 -153118597 + L1ME1 LINE L1 5610 6161 -5 254 237 0 13 chr5 46511622 46511698 -153118452 + L1MCc LINE L1 1394 1468 -4955 2115 130 0 0 chr5 46511715 46512016 -153118134 - AluSx SINE Alu -11 301 1 334 292 25 51 chr5 46512037 46512235 -153117915 + L1MCc LINE L1 1683 1890 -5041 615 353 119 10 chr5 46512245 46512647 -153117503 - MLT2F LTR ERVL -89 574 129 687 293 51 5 chr5 46512648 46512863 -153117287 - MLT2F LTR ERVL -436 227 3 1375 279 78 26 chr5 46512874 46513785 -153116365 + L1MCc LINE L1 2678 3586 -3355 4685 20 0 2 chr5 46513815 46514359 -153115791 + L1PA3 LINE L1 5610 6152 -3 191 344 16 0 chr5 46514712 46514773 -153115377 - L2 LINE L2 -2 3311 3250 25 75 0 0 chr5 46514880 46514933 -153115217 + AT_rich Low_complexity Low_complexity 1 53 0 296 204 35 97 chr5 46515352 46515465 -153114685 + MLT2F LTR ERVL 465 570 -93 294 313 31 22 chr5 46515467 46515646 -153114504 - L1MDa LINE L1 -5029 1501 1311 1859 101 11 18 chr5 46515973 46516249 -153113901 + AluSq SINE Alu 1 274 -39 210 37 0 0 chr5 46516554 46516581 -153113569 + (CTG)n Simple_repeat Simple_repeat 3 29 0 276 227 135 123 chr5 46517132 46517295 -153112855 + MER5B DNA MER1_type 5 169 -9 1890 163 0 0 chr5 46519744 46520051 -153110099 + AluJb SINE Alu 1 307 -5 2188 115 0 0 chr5 46520714 46521018 -153109132 - AluSc SINE Alu -5 304 1 476 254 16 60 chr5 46521045 46521230 -153108920 + MER104 DNA MER2_type 1 177 -3 218 215 123 0 chr5 46521507 46521572 -153108578 + MIR SINE MIR 116 188 -74 21 36 0 0 chr5 46521843 46521871 -153108279 + AT_rich Low_complexity Low_complexity 1 28 0 2394 49 0 0 chr5 46522290 46522576 -153107574 + AluY SINE Alu 1 286 -25 24 32 0 0 chr5 46523762 46523793 -153106357 + AT_rich Low_complexity Low_complexity 1 31 0 364 302 83 79 chr5 46524433 46524926 -153105224 - L2 LINE L2 -922 2392 1898 1468 147 60 23 chr5 46525504 46525803 -153104347 - MER2 DNA MER2_type -35 310 1 23 33 0 0 chr5 46525846 46525876 -153104274 + AT_rich Low_complexity Low_complexity 1 30 0 299 213 154 15 chr5 46525985 46526121 -153104029 - L1ME4a LINE L1 -4 6117 5963 2371 74 0 37 chr5 46526737 46527060 -153103090 + AluY SINE Alu 1 311 0 27 29 0 0 chr5 46527972 46528006 -153102144 + AT_rich Low_complexity Low_complexity 1 34 0 430 294 83 52 chr5 46528086 46528338 -153101812 - MIR SINE MIR -1 261 2 2224 92 0 0 chr5 46528552 46528868 -153101282 - AluSg SINE Alu 0 316 1 3763 59 34 0 chr5 46531286 46531760 -153098390 + LTR2B LTR ERV1 1 490 0 2413 107 8 16 chr5 46531760 46532143 -153098007 + Harlequin LTR ERV1 1 380 -6516 768 102 8 0 chr5 46532138 46532256 -153097894 + Harlequin LTR ERV1 262 380 -6516 * 4374 77 12 22 chr5 46532251 46532899 -153097251 + Harlequin LTR ERV1 262 903 -5993 * 6358 64 16 20 chr5 46532884 46533891 -153096259 + Harlequin LTR ERV1 1572 2574 -4322 * 23428 109 7 8 chr5 46533890 46537436 -153092714 + Harlequin LTR ERV1 3352 6896 0 3909 64 8 0 chr5 46537436 46537922 -153092228 + LTR2B LTR ERV1 1 490 0 548 214 31 0 chr5 46538186 46538284 -153091866 + FRAM SINE Alu 4 104 -72 1581 174 34 34 chr5 46538285 46538613 -153091537 - MER61C LTR ERV1 -3 431 104 305 197 0 0 chr5 46538662 46538723 -153091427 + Alu SINE Alu 235 295 -7 2117 122 10 0 chr5 46538742 46539046 -153091104 + AluSq SINE Alu 1 307 -6 338 316 36 65 chr5 46539178 46539317 -153090833 - L2 LINE L2 -16 3256 3122 737 76 29 0 chr5 46539529 46539634 -153090516 + MER30B DNA MER1_type 1 108 -82 23 0 0 0 chr5 46539901 46539924 -153090226 + AT_rich Low_complexity Low_complexity 1 23 0 3909 127 22 9 chr5 46540089 46540734 -153089416 + MER39B LTR ERV1 1 653 0 230 269 0 0 chr5 46540781 46540833 -153089317 + (TATG)n Simple_repeat Simple_repeat 4 55 0 554 245 176 34 chr5 46541006 46541210 -153088940 - MIR SINE MIR 0 262 30 243 227 0 0 chr5 46541265 46541331 -153088819 + (TA)n Simple_repeat Simple_repeat 1 66 0 217 367 19 13 chr5 46541688 46541846 -153088304 - L3 LINE CR1 -66 1511 1353 228 241 0 0 chr5 46542619 46542677 -153087473 + (CA)n Simple_repeat Simple_repeat 2 59 0 679 240 32 7 chr5 46542743 46542897 -153087253 + MIR SINE MIR 7 164 -98 377 334 56 35 chr5 46543005 46543362 -153086788 + MLT1J LTR MaLR 100 467 -44 3658 132 153 51 chr5 46543362 46544111 -153086039 + LTR1B LTR ERV1 1 826 0 377 334 56 35 chr5 46544111 46544127 -153086023 + MLT1J LTR MaLR 467 481 -30 649 213 0 8 chr5 46544224 46544346 -153085804 + FLAM_C SINE Alu 1 121 -12 357 82 0 0 chr5 46544353 46544402 -153085748 + (CA)n Simple_repeat Simple_repeat 2 50 0 235 346 116 14 chr5 46545755 46546092 -153084058 - L2 LINE L2 -193 3079 2651 3176 74 16 0 chr5 46546190 46546620 -153083530 - L1PA13 LINE L1 -3 6160 5724 201 254 84 28 chr5 46547448 46547519 -153082631 - L2 LINE L2 0 3272 3198 357 134 76 199 chr5 46547743 46547833 -153082317 + LOR1a LTR ERV1 1 62 -435 2359 95 3 0 chr5 46547833 46548137 -153082013 - AluSp SINE Alu -8 305 1 357 134 76 199 chr5 46548137 46548217 -153081933 + LOR1a LTR ERV1 62 150 -347 1332 170 0 0 chr5 46548231 46548449 -153081701 + LOR1a LTR ERV1 280 497 0 213 217 0 0 chr5 46548629 46548675 -153081475 + (CCTA)n Simple_repeat Simple_repeat 2 47 0 2008 319 75 14 chr5 46548853 46549665 -153080485 + L2 LINE L2 1848 2709 -605 835 195 151 0 chr5 46549665 46549850 -153080300 + MER20 DNA MER1_type 2 214 -5 510 343 66 26 chr5 46549850 46550115 -153080035 + L2 LINE L2 2731 3004 -268 447 288 207 27 chr5 46550115 46550337 -153079813 - MIR SINE MIR 0 262 1 600 264 109 49 chr5 46550341 46550407 -153079743 + L2 LINE L2 3010 3071 -242 1945 142 0 0 chr5 46550407 46550709 -153079441 + AluSx SINE Alu 1 302 0 600 264 109 49 chr5 46550709 46550925 -153079225 + L2 LINE L2 3071 3310 -3 639 300 116 4 chr5 46550951 46551184 -153078966 + MIR SINE MIR 2 260 -2 5281 123 35 16 chr5 46551744 46552381 -153077769 + L1PA14 LINE L1 4753 5376 -785 6936 68 26 0 chr5 46552381 46553255 -153076895 - MER11D LTR ERVK 0 897 1 5281 123 35 16 chr5 46553255 46554001 -153076149 + L1PA14 LINE L1 5376 6161 0 309 246 0 0 chr5 46554232 46554301 -153075849 + MLT1F1 LTR MaLR 1 69 -473 2111 203 30 28 chr5 46554304 46554906 -153075244 + pTR5 LTR ERV1 742 1344 -1094 4691 110 56 72 chr5 46554922 46555757 -153074393 + LTR12 LTR ERV1 5 826 0 1449 248 83 19 chr5 46555758 46556226 -153073924 + MLT1F1 LTR MaLR 70 567 0 1836 184 34 11 chr5 46557278 46557659 -153072491 + MLT1B LTR MaLR 1 390 0 532 247 46 17 chr5 46557980 46558154 -153071996 + MIR SINE MIR 84 262 0 32 26 0 0 chr5 46559804 46559843 -153070307 + AT_rich Low_complexity Low_complexity 1 39 0 1555 32 5 0 chr5 46559867 46560056 -153070094 - L1PA4 LINE L1 0 6155 5966 241 54 0 0 chr5 46560056 46560093 -153070057 + L1P LINE L1 5300 5336 -795 414 229 57 130 chr5 46560400 46560465 -153069685 - MER5B DNA MER1_type 0 178 110 2249 101 0 19 chr5 46560465 46560772 -153069378 + AluSc SINE Alu 1 301 -8 414 229 57 130 chr5 46560772 46560898 -153069252 - MER5B DNA MER1_type -68 110 1 1651 221 73 53 chr5 46560978 46561529 -153068621 - MER68 LTR ERV1 0 562 1 622 233 0 9 chr5 46562276 46562392 -153067758 + AluJb SINE Alu 3 117 -195 7381 39 0 0 chr5 46562422 46564070 -153066080 - L1PA4 LINE L1 0 6155 4506 366 294 5 98 chr5 46564421 46564480 -153065670 - MIR3 SINE MIR -9 199 136 2286 97 7 0 chr5 46564480 46564778 -153065372 + AluSq SINE Alu 1 300 -13 366 294 5 98 chr5 46564778 46564902 -153065248 - MIR3 SINE MIR -72 136 33 205 57 86 0 chr5 46564922 46564957 -153065193 + T-rich Low_complexity Low_complexity 2 39 0 2310 67 0 64 chr5 46565320 46565647 -153064503 + AluY SINE Alu 2 307 -4 1236 202 73 37 chr5 46566133 46566820 -153063330 + L1ME LINE L1 4914 5669 -497 3949 163 14 9 chr5 46566823 46567559 -153062591 + L1MB3 LINE L1 5444 6182 -1 2030 80 44 7 chr5 46567578 46567853 -153062297 - AluSc SINE Alu -12 297 13 206 326 82 22 chr5 46567877 46568012 -153062138 - L2 LINE L2 -1569 1745 1603 386 226 29 58 chr5 46568092 46568229 -153061921 - MIR SINE MIR -12 250 118 620 205 0 9 chr5 46568335 46568447 -153061703 + FLAM_A SINE Alu 11 121 -21 21 0 0 0 chr5 46568447 46568468 -153061682 + AT_rich Low_complexity Low_complexity 1 21 0 256 348 22 11 chr5 46568830 46569014 -153061136 + L1MEc LINE L1 1398 1583 -4813 180 0 0 0 chr5 46569043 46569063 -153061087 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 837 174 0 0 chr5 46569426 46569558 -153060592 - FLAM_C SINE Alu -1 132 1 180 0 0 0 chr5 46569835 46569855 -153060295 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1541 103 0 0 chr5 46570051 46570246 -153059904 - AluSg/x SINE Alu -10 300 106 727 249 6 0 chr5 46570475 46570644 -153059506 - MER58B DNA MER1_type 0 341 172 22 35 0 0 chr5 46570683 46570712 -153059438 + AT_rich Low_complexity Low_complexity 1 29 0 1458 149 57 19 chr5 46570901 46571217 -153058933 + MER4A LTR ERV1 1 328 -336 302 174 3 31 chr5 46571397 46571483 -153058667 + MER4C LTR ERV1 383 610 0 398 245 124 26 chr5 46571648 46571977 -153058173 + L1MEc LINE L1 2521 2882 -3333 524 329 70 20 chr5 46572024 46572367 -153057783 - LTR16C LTR ERVL -33 458 99 195 358 116 0 chr5 46573300 46573395 -153056755 - MIR3 SINE MIR -43 165 60 495 236 216 0 chr5 46573863 46574011 -153056139 - MER5A DNA MER1_type 0 189 10 408 305 4 49 chr5 46574328 46574573 -153055577 + MIR SINE MIR 6 235 -27 1058 199 23 23 chr5 46575290 46575506 -153054644 + MER20 DNA MER1_type 1 216 -3 329 261 0 11 chr5 46575726 46575814 -153054336 + L1MEc LINE L1 206 292 -6271 320 294 93 7 chr5 46575932 46576101 -153054049 + L1MEc LINE L1 1199 1379 -5005 14314 182 10 4 chr5 46577333 46581138 -153049012 - L1PB1 LINE L1 -1 6866 3040 38859 74 28 4 chr5 46581148 46587147 -153043003 + L1PA6 LINE L1 11 6154 0 11143 97 37 7 chr5 46587152 46589365 -153040785 - L1PB1 LINE L1 -3804 3058 636 970 167 70 0 chr5 46589367 46589553 -153040597 - L1PB1 LINE L1 -6663 200 2 2354 90 0 0 chr5 46590320 46590621 -153039529 + AluY SINE Alu 1 301 -10 948 284 144 27 chr5 46591266 46591717 -153038433 + LTR33 LTR ERVL 8 511 -10 197 174 23 46 chr5 46591853 46591907 -153038243 + MIR SINE MIR 42 94 -114 282 254 0 0 chr5 46592061 46592171 -153037979 + (CA)n Simple_repeat Simple_repeat 2 111 0 307 246 8 97 chr5 46592958 46593092 -153037058 - LTR16A1 LTR ERVL -333 124 3 252 284 0 27 chr5 46593350 46593424 -153036726 + L2 LINE L2 3195 3266 -47 338 224 86 43 chr5 46593468 46593584 -153036566 - MIR SINE MIR -61 201 81 361 240 55 65 chr5 46595063 46595263 -153034887 + MIR SINE MIR 65 262 0 416 251 163 30 chr5 46596176 46596379 -153033771 + MIR SINE MIR 33 262 0 402 21 0 0 chr5 46597404 46597451 -153032699 + (TG)n Simple_repeat Simple_repeat 2 48 0 569 314 83 22 chr5 46599246 46599609 -153030541 - LTR16C LTR ERVL -8 483 99 825 184 32 6 chr5 46599648 46599806 -153030344 - L1MA9 LINE L1 -146 6166 6005 714 201 43 18 chr5 46599806 46599970 -153030180 + MLT1F1 LTR MaLR 398 565 -2 368 281 0 16 chr5 46599975 46600096 -153030054 + L1ME4a LINE L1 5786 5904 -217 301 241 60 24 chr5 46600414 46600497 -153029653 + MLT1K LTR MaLR 472 557 -31 180 365 0 0 chr5 46600643 46600706 -153029444 - MER5A DNA MER1_type -40 149 87 3018 208 69 43 chr5 46600732 46601766 -153028384 - L1 LINE L1 -3283 4282 3217 3423 123 9 61 chr5 46601840 46602480 -153027670 + MER4B LTR ERV1 1 779 0 1622 318 167 28 chr5 46603053 46603958 -153026192 + L2 LINE L2 1678 2455 -858 1600 184 7 3 chr5 46603958 46604246 -153025904 - AluJo SINE Alu -13 299 11 1622 318 167 28 chr5 46604246 46604780 -153025370 + L2 LINE L2 2455 3313 0 25 31 0 0 chr5 46605234 46605266 -153024884 + AT_rich Low_complexity Low_complexity 1 32 0 773 208 30 6 chr5 46605764 46605932 -153024218 - MER3 DNA MER1_type -4 205 34 2149 205 14 70 chr5 46605932 46606449 -153023701 + LTR64 LTR ERVK 1 488 -70 648 325 33 10 chr5 46606633 46606935 -153023215 - L2 LINE L2 -1221 2093 1785 1329 154 202 4 chr5 46607062 46607315 -153022835 - AluSx SINE Alu -8 304 2 357 177 0 0 chr5 46608489 46608568 -153021582 + (TA)n Simple_repeat Simple_repeat 1 79 0 1486 199 11 28 chr5 46608570 46608856 -153021294 - AluJo SINE Alu -31 281 1 361 212 242 35 chr5 46608868 46609066 -153021084 - L1MC5 LINE L1 -447 7514 7276 788 250 57 20 chr5 46609156 46609480 -153020670 - L1MC4a LINE L1 -632 7233 6923 354 180 169 77 chr5 46609501 46609684 -153020466 - L2 LINE L2 -1218 2096 1897 198 0 0 0 chr5 46609703 46609725 -153020425 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1571 114 9 0 chr5 46609746 46609956 -153020194 - AluSg/x SINE Alu -2 310 99 486 318 71 24 chr5 46611429 46611766 -153018384 + L1M4 LINE L1 3704 4056 -2090 2397 43 11 0 chr5 46612979 46613285 -153016865 + AluY SINE Alu 1 309 0 685 219 15 0 chr5 46613285 46613422 -153016728 - L1M3 LINE L1 -476 5707 5569 180 247 91 13 chr5 46614324 46614401 -153015749 + L3 LINE CR1 845 927 -650 1287 159 19 24 chr5 46614544 46614715 -153015435 + L1PA13 LINE L1 5888 6063 -100 2446 127 31 3 chr5 46614715 46615069 -153015081 + THE1B LTR MaLR 1 364 0 1287 159 19 24 chr5 46615069 46615149 -153015001 + L1PA13 LINE L1 6063 6142 -21 23 78 0 0 chr5 46615350 46615401 -153014749 + AT_rich Low_complexity Low_complexity 1 51 0 1908 166 9 21 chr5 46616213 46616550 -153013600 + MER1B DNA MER1_type 1 333 -6 418 191 12 0 chr5 46616704 46616788 -153013362 + AluJ/FRAM SINE Alu 228 312 0 600 274 53 41 chr5 46618048 46618366 -153011784 - L1M4 LINE L1 -2088 4058 3737 2147 96 38 0 chr5 46620520 46620813 -153009337 + AluSp SINE Alu 2 305 -8 1284 66 38 89 chr5 46620870 46621083 -153009067 - AluY SINE Alu -2 309 108 235 270 27 14 chr5 46621159 46621233 -153008917 + MIR SINE MIR 47 121 -141 2124 107 4 0 chr5 46621577 46621858 -153008292 + AluSg SINE Alu 1 282 -28 207 88 0 0 chr5 46621858 46621892 -153008258 + (CA)n Simple_repeat Simple_repeat 2 35 0 2095 115 10 0 chr5 46622293 46622588 -153007562 + AluSq SINE Alu 1 298 -15 1530 219 60 31 chr5 46622880 46623339 -153006811 + MER41B LTR ERV1 109 486 0 273 100 67 50 chr5 46623645 46623705 -153006445 + L1MB4 LINE L1 6119 6179 -1 1171 129 10 35 chr5 46624413 46624614 -153005536 + MSTC LTR MaLR 1 196 -232 1015 153 21 168 chr5 46625165 46625498 -153004652 + MLT1A2 LTR MaLR 1 284 -90 1496 166 60 42 chr5 46627033 46627364 -153002786 - MER1B DNA MER1_type 0 337 1 303 185 0 15 chr5 46627519 46627584 -153002566 + AluJ/FRAM SINE Alu 233 296 -6 302 193 45 91 chr5 46628416 46628504 -153001646 - MER66B LTR ERV1 0 486 403 * 1172 216 5 67 chr5 46628472 46628861 -153001289 - MER41B LTR ERV1 -47 588 224 189 154 0 0 chr5 46628935 46628974 -153001176 + T-rich Low_complexity Low_complexity 1 39 0 285 156 73 110 chr5 46629262 46629371 -153000779 + MER104 DNA Tc2 37 141 -39 5834 67 5 158 chr5 46629371 46630492 -152999658 + SVA Other Other 10 959 -427 2747 88 19 36 chr5 46630493 46630960 -152999190 + SVA Other Other 6 464 -922 3019 176 82 8 chr5 46631065 46631683 -152998467 + L1MB3 LINE L1 5506 6169 -14 1837 183 0 31 chr5 46633036 46633089 -152997061 + MER1B DNA MER1_type 2 55 -2657 2284 86 122 0 chr5 46633089 46633425 -152996725 + MER51B LTR ERV1 1 377 0 1837 183 0 31 chr5 46633425 46633720 -152996430 + MER1B DNA MER1_type 55 339 0 415 67 0 100 chr5 46633875 46633965 -152996185 + AluJ/FRAM SINE Alu 232 312 0 22 0 0 0 chr5 46634289 46634311 -152995839 + AT_rich Low_complexity Low_complexity 1 22 0 197 284 27 14 chr5 46635328 46635402 -152994748 - MIR SINE MIR -141 121 47 1157 145 0 11 chr5 46636396 46636582 -152993568 - AluSg/x SINE Alu 0 312 129 1177 108 0 0 chr5 46636698 46636846 -152993304 - AluSg SINE Alu -155 155 8 406 293 70 35 chr5 46638103 46638444 -152991706 + L1 LINE L1 3703 4055 -2091 375 23 0 0 chr5 46639885 46639929 -152990221 + (TC)n Simple_repeat Simple_repeat 1 44 0 1219 95 4 1 chr5 46639930 46640176 -152989974 - AluSc SINE Alu -31 278 2 21 0 0 0 chr5 46640888 46640909 -152989241 + AT_rich Low_complexity Low_complexity 1 21 0 2102 114 26 3 chr5 46641547 46641853 -152988297 + AluSp SINE Alu 1 313 0 1198 229 28 0 chr5 46642165 46642418 -152987732 - MER31-int LTR ERV1 -808 4128 3869 2651 43 0 0 chr5 46642857 46643158 -152986992 + AluY SINE Alu 1 301 -10 2282 106 3 0 chr5 46644107 46644410 -152985740 - AluSp SINE Alu -9 304 1 1490 196 56 3 chr5 46644416 46644702 -152985448 - AluJb SINE Alu -11 301 1 1124 166 40 36 chr5 46645458 46645681 -152984469 + AluJb SINE Alu 83 306 -6 271 188 25 62 chr5 46645691 46645771 -152984379 + L1 LINE L1 4674 4750 -1396 * 430 146 52 34 chr5 46645769 46645887 -152984263 + L1PA16 LINE L1 5859 5971 -195 926 86 0 72 chr5 46645888 46646027 -152984123 + AluSx SINE Alu 1 129 -184 543 69 83 18 chr5 46646027 46646304 -152983846 + (TA)n Simple_repeat Simple_repeat 1 295 0 1149 148 17 0 chr5 46646305 46646481 -152983669 + AluSx SINE Alu 123 301 -9 609 201 23 114 chr5 46646482 46646701 -152983449 + L1PA16 LINE L1 5963 6161 -5 1637 74 0 5 chr5 46646741 46646943 -152983207 + AluSq SINE Alu 1 201 -112 692 202 0 0 chr5 46647061 46647180 -152982970 - AluJb SINE Alu -192 120 2 1896 151 16 7 chr5 46647253 46647558 -152982592 - AluSx SINE Alu -4 308 1 189 272 117 0 chr5 46647634 46647737 -152982413 + L2 LINE L2 3054 3168 -145 1723 182 13 7 chr5 46647898 46648205 -152981945 + AluJo SINE Alu 1 309 -3 5715 155 40 22 chr5 46648205 46649000 -152981150 - MER31-int LTR ERV1 -1479 5119 4294 1548 157 45 11 chr5 46649000 46649286 -152980864 + AluSx SINE Alu 1 296 -16 5715 155 40 22 chr5 46649286 46649617 -152980533 - MER31-int LTR ERV1 -2304 4294 3970 236 291 196 20 chr5 46650273 46650340 -152979810 - MER69A DNA AcHobo -2352 174 120 2249 118 3 0 chr5 46650340 46650644 -152979506 + AluSx SINE Alu 1 305 -7 236 291 196 20 chr5 46650644 46650724 -152979426 - MER69A DNA AcHobo -2406 120 1 775 248 71 50 chr5 46651198 46651520 -152978630 + L1M4 LINE L1 3703 4031 -2115 1573 159 222 17 chr5 46651524 46651982 -152978168 + LTR49 LTR ERV1 165 593 -2 2045 165 24 13 chr5 46651986 46652362 -152977788 + LTR49-int LTR ERV1 1 380 -5951 2037 125 0 0 chr5 46652362 46652642 -152977508 - AluSx SINE Alu -17 295 16 1448 162 97 25 chr5 46652644 46652922 -152977228 - AluJo SINE Alu -14 298 1 279 183 21 151 chr5 46652924 46653017 -152977133 - MER34C LTR ERV1 -492 93 13 1362 120 4 52 chr5 46653530 46653653 -152976497 + AluSg/x SINE Alu 65 175 -135 6483 181 52 12 chr5 46653653 46654683 -152975467 + MER11C LTR ERVK 1 1071 0 1362 120 4 52 chr5 46654683 46654813 -152975337 + AluSg/x SINE Alu 175 310 0 273 254 22 65 chr5 46654899 46655037 -152975113 + MER104 DNA Tc2 5 136 -44 1589 175 3 26 chr5 46655080 46655388 -152974762 - AluJo SINE Alu -8 304 4 735 171 0 0 chr5 46655824 46655953 -152974197 - AluJo SINE Alu -75 237 109 1557 157 33 30 chr5 46656789 46657206 -152972944 + AluJo SINE Alu 7 424 0 1908 108 29 4 chr5 46657347 46657624 -152972526 - AluSx SINE Alu -14 298 15 23 0 0 0 chr5 46659394 46659417 -152970733 + AT_rich Low_complexity Low_complexity 1 23 0 386 132 9 123 chr5 46660668 46660774 -152969376 + L1MC4 LINE L1 7752 7845 -197 1847 127 12 0 chr5 46660823 46661082 -152969068 - AluSx SINE Alu -39 273 12 1734 119 50 53 chr5 46661144 46661446 -152968704 + AluSq SINE Alu 5 305 -8 520 270 125 85 chr5 46661847 46662079 -152968071 - LTR33 LTR ERVL -19 502 281 1562 205 0 7 chr5 46662079 46662248 -152967902 - AluJo SINE Alu -7 305 136 287 43 0 43 chr5 46662248 46662294 -152967856 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 2099 101 29 4 chr5 46662294 46662570 -152967580 - AluSq SINE Alu -30 283 1 1562 205 0 7 chr5 46662570 46662696 -152967454 - AluJo SINE Alu -174 138 11 520 270 125 85 chr5 46662696 46662944 -152967206 - LTR33 LTR ERVL -240 281 3 2023 141 3 3 chr5 46662981 46663279 -152966871 - AluSx SINE Alu -14 298 1 2238 268 37 36 chr5 46663379 46663693 -152966457 + L1M4 LINE L1 3473 3785 -2361 2398 69 0 23 chr5 46663693 46663996 -152966154 + AluY SINE Alu 1 296 -15 2238 268 37 36 chr5 46663996 46664512 -152965638 + L1M4 LINE L1 3785 4304 -1842 2173 103 10 0 chr5 46664832 46665134 -152965016 - AluSq SINE Alu -8 305 1 7443 44 2 0 chr5 46665299 46666296 -152963854 + L1PA4 LINE L1 5147 6150 -5 3053 68 63 0 chr5 46666296 46666693 -152963457 + MER11D LTR ERVK 476 897 0 1413 129 0 14 chr5 46666693 46666902 -152963248 + AluSg/x SINE Alu 93 298 -14 1462 194 0 52 chr5 46666961 46667271 -152962879 + AluJo SINE Alu 2 295 -17 323 203 31 0 chr5 46667687 46667751 -152962399 + MER75 DNA T2_type 1 66 -448 1978 150 3 10 chr5 46667766 46668073 -152962077 - AluSq SINE Alu -6 307 3 181 323 62 23 chr5 46669463 46669593 -152960557 - MIR SINE MIR -119 143 9 1858 164 0 43 chr5 46669610 46669933 -152960217 - AluJb SINE Alu -3 309 1 1986 134 24 0 chr5 46670197 46670489 -152959661 - AluSq SINE Alu -14 299 1 2134 110 0 35 chr5 46670955 46671272 -152958878 + AluY SINE Alu 1 306 -5 714 183 77 48 chr5 46671314 46671522 -152958628 + AluJb SINE Alu 83 296 -16 1337 170 73 28 chr5 46671568 46671856 -152958294 + L1PA16 LINE L1 5859 6159 -7 30 59 0 0 chr5 46673224 46673275 -152956875 + AT_rich Low_complexity Low_complexity 1 51 0 3915 114 34 16 chr5 46673427 46674051 -152956099 - L1PA13 LINE L1 -3 6160 5526 2031 128 0 4 chr5 46674351 46674655 -152955495 + AluSg SINE Alu 2 304 0 380 266 46 28 chr5 46675069 46675178 -152954972 - MLT1A2 LTR MaLR -90 284 174 198 209 0 0 chr5 46675179 46675222 -152954928 + GA-rich Low_complexity Low_complexity 2 44 0 658 176 61 34 chr5 46675256 46675404 -152954746 - MLT1A2 LTR MaLR -222 152 1 222 37 0 0 chr5 46675536 46675563 -152954587 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 6674 168 12 34 chr5 46675589 46676876 -152953274 - LTR57-int LTR ERVL -3512 1831 573 2477 57 0 10 chr5 46676876 46677177 -152952973 + AluY SINE Alu 1 298 -13 643 242 0 8 chr5 46677301 46677429 -152952721 + LTR57-int LTR ERVL 8 134 -5209 462 349 18 22 chr5 46677445 46677717 -152952433 + L1ME LINE L1 5463 5733 -429 * 578 154 31 33 chr5 46677679 46677845 -152952305 - L1M4 LINE L1 -680 5494 5335 2144 203 80 2 chr5 46677863 46678301 -152951849 + MER70A LTR ERVL 1 472 0 1665 98 18 4 chr5 46678403 46678628 -152951522 - AluSg/x SINE Alu -17 295 68 274 32 0 0 chr5 46678628 46678659 -152951491 + AluY SINE Alu 14 44 -258 237 159 0 0 chr5 46680212 46680256 -152949894 + CT-rich Low_complexity Low_complexity 2 45 0 411 21 0 0 chr5 46680681 46680729 -152949421 + (CA)n Simple_repeat Simple_repeat 2 49 0 2362 157 47 93 chr5 46681387 46681897 -152948253 - MER4B LTR ERV1 -11 768 236 2295 53 42 3 chr5 46681897 46682181 -152947969 - AluY SINE Alu -16 295 1 1932 134 4 0 chr5 46682181 46682457 -152947693 - AluSx SINE Alu -29 283 7 2362 157 47 93 chr5 46682457 46682577 -152947573 - MER4B LTR ERV1 -541 238 1 2108 125 7 3 chr5 46682726 46683030 -152947120 + AluSp SINE Alu 1 305 -8 1260 220 14 4 chr5 46684330 46684607 -152945543 - AluJb SINE Alu -28 284 5 180 245 0 0 chr5 46684814 46684867 -152945283 + CT-rich Low_complexity Low_complexity 3 55 0 201 162 0 0 chr5 46685442 46685479 -152944671 + A-rich Low_complexity Low_complexity 1 37 0 394 152 5 0 chr5 46685891 46685963 -152944187 - AluJ/FLAM SINE Alu -244 58 1 221 294 91 57 chr5 46685970 46686235 -152943915 - L2 LINE L2 -5 3308 3035 414 203 0 0 chr5 46686285 46686359 -152943791 + AluJ/FLAM SINE Alu 1 74 -238 4124 56 2 0 chr5 46686369 46686854 -152943296 + MER11D LTR ERVK 1 486 -411 40104 71 5 24 chr5 46686856 46692137 -152938013 + L1P LINE L1 1 5383 -763 2100 103 17 10 chr5 46692137 46692438 -152937712 + AluSg SINE Alu 1 303 -7 40104 71 5 24 chr5 46692438 46692514 -152937636 + L1P LINE L1 5377 5254 -887 7448 38 7 0 chr5 46692514 46693403 -152936747 + L1PA4 LINE L1 5254 6148 -7 540 256 88 47 chr5 46694965 46695305 -152934845 + L1M4 LINE L1 3705 4058 -2088 290 206 0 43 chr5 46696557 46696649 -152933501 - AluY SINE Alu 0 301 214 1647 179 30 27 chr5 46696787 46697123 -152933027 - MER1B DNA MER1_type 0 337 1 29 60 0 0 chr5 46697935 46697985 -152932165 + AT_rich Low_complexity Low_complexity 1 50 0 3880 136 11 0 chr5 46698143 46698768 -152931382 - L1PA13 LINE L1 -6 6157 5526 397 277 9 9 chr5 46699447 46699559 -152930591 - MLT1A2 LTR MaLR -90 284 173 216 264 0 0 chr5 46699559 46699612 -152930538 + GA-rich Low_complexity Low_complexity 2 54 0 770 139 44 44 chr5 46699630 46699788 -152930362 - MLT1A2 LTR MaLR -216 158 1 21 0 0 0 chr5 46699954 46699975 -152930175 + AT_rich Low_complexity Low_complexity 1 21 0 204 191 63 0 chr5 46700028 46700091 -152930059 + (TTAA)n Simple_repeat Simple_repeat 4 70 0 6988 161 29 25 chr5 46700117 46700439 -152929711 - LTR57-int LTR ERVL -3512 1831 1512 2525 59 0 3 chr5 46700439 46700744 -152929406 + AluY SINE Alu 1 304 -7 6988 161 29 25 chr5 46700744 46701710 -152928440 - LTR57-int LTR ERVL -3831 1512 538 640 227 23 8 chr5 46701780 46701912 -152928238 + LTR57-int LTR ERVL 1 134 -5209 612 295 46 69 chr5 46701928 46702409 -152927741 + L1ME3 LINE L1 5463 5932 -230 23 0 0 0 chr5 46703113 46703136 -152927014 + AT_rich Low_complexity Low_complexity 1 23 0 37 23 0 0 chr5 46703351 46703395 -152926755 + AT_rich Low_complexity Low_complexity 1 44 0 522 114 40 17 chr5 46703395 46703571 -152926579 + (TA)n Simple_repeat Simple_repeat 1 180 0 790 181 84 0 chr5 46703572 46703738 -152926412 + AluJb SINE Alu 121 300 -12 22 56 0 0 chr5 46707891 46707927 -152922223 + AT_rich Low_complexity Low_complexity 1 36 0 210 263 13 40 chr5 46708002 46708154 -152921996 + T-rich Low_complexity Low_complexity 1 148 0 1328 194 39 0 chr5 46708329 46708612 -152921538 + AluJb SINE Alu 1 294 -18 1489 184 57 13 chr5 46710321 46710503 -152919647 - AluJo SINE Alu 0 312 110 429 20 0 0 chr5 46710503 46710553 -152919597 + (TG)n Simple_repeat Simple_repeat 1 50 0 1489 184 57 13 chr5 46710553 46710669 -152919481 - AluJo SINE Alu -202 110 1 373 320 31 8 chr5 46710764 46710892 -152919258 - LTR33 LTR ERVL -373 148 18 1789 173 7 7 chr5 46710941 46711248 -152918902 - AluSx SINE Alu -5 307 1 2367 262 48 38 chr5 46711278 46712220 -152917930 + L1M4 LINE L1 3356 4306 -1840 715 158 0 0 chr5 46713712 46713852 -152916298 - AluSp/q SINE Alu 0 325 186 1113 39 16 0 chr5 46713852 46713981 -152916169 + AluY SINE Alu 1 131 -180 22 35 0 0 chr5 46714091 46714120 -152916030 + AT_rich Low_complexity Low_complexity 1 29 0 605 13 119 0 chr5 46714146 46714305 -152915845 + (TA)n Simple_repeat Simple_repeat 2 179 0 255 65 65 32 chr5 46714309 46714371 -152915779 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 499 54 90 12 chr5 46714373 46714539 -152915611 + (TA)n Simple_repeat Simple_repeat 1 179 0 823 50 0 25 chr5 46714539 46714658 -152915492 - FLAM_C SINE Alu -14 119 4 1321 199 3 63 chr5 46715918 46716234 -152913916 + AluJb SINE Alu 9 305 -7 337 214 29 86 chr5 46716280 46716420 -152913730 - MER104 DNA Tc2 -44 136 5 1996 149 0 0 chr5 46716547 46716842 -152913308 - AluSx SINE Alu -17 295 1 423 0 0 0 chr5 46717299 46717346 -152912804 + (TG)n Simple_repeat Simple_repeat 1 47 0 344 176 24 71 chr5 46717416 46717501 -152912649 + MER34C LTR ERV1 13 93 -492 1233 206 98 18 chr5 46717503 46717779 -152912371 + AluJo SINE Alu 1 298 -14 1768 131 57 20 chr5 46717782 46718080 -152912070 + AluSx SINE Alu 1 309 -3 2028 130 38 12 chr5 46718130 46718476 -152911674 - LTR29-int LTR ERV1 -5976 355 1 550 164 231 51 chr5 46718482 46718677 -152911473 - LTR29 LTR ERV1 -4 618 389 * 1052 142 98 0 chr5 46718674 46718879 -152911271 - LTR49 LTR ERV1 -370 225 1 698 254 48 54 chr5 46718886 46719217 -152910933 - L1M4 LINE L1 -2115 4031 3703 3775 80 75 14 chr5 46719657 46720218 -152909932 + LTR61 LTR ERV1 1 595 0 483 237 151 13 chr5 46720254 46720406 -152909744 + MER69A DNA AcHobo 1 173 -4 3830 179 63 105 chr5 46720996 46721507 -152908643 + MER31-int LTR ERV1 3880 4411 -1920 1651 197 3 3 chr5 46721507 46721807 -152908343 + AluJb SINE Alu 1 300 -12 1965 154 3 0 chr5 46721808 46722101 -152908049 + AluSx SINE Alu 1 294 -18 3830 179 63 105 chr5 46722101 46722468 -152907682 + MER31-int LTR ERV1 4411 4792 -1539 2261 104 20 0 chr5 46722468 46722765 -152907385 - AluSp SINE Alu -10 303 1 3830 179 63 105 chr5 46722765 46722903 -152907247 + MER31-int LTR ERV1 4792 6163 -168 1583 197 97 18 chr5 46723027 46723428 -152906722 + MER39 LTR ERV1 275 707 0 36263 65 8 15 chr5 46724063 46728124 -152902026 + L1PA6 LINE L1 13 4100 -2054 2347 73 0 7 chr5 46728124 46728426 -152901724 - AluY SINE Alu -11 300 1 36263 65 8 15 chr5 46728426 46728543 -152901607 + L1PA6 LINE L1 4100 4216 -1938 4632 160 25 35 chr5 46728543 46729508 -152900642 + LTR5 LTR ERVK 1 955 -14 36263 65 8 15 chr5 46729508 46730989 -152899161 + L1PA6 LINE L1 4216 6148 -6 2299 50 6 50 chr5 46732957 46733276 -152896874 + AluY SINE Alu 1 305 -6 1811 90 62 31 chr5 46733285 46733752 -152896398 + AluSp SINE Alu 1 313 0 1649 198 36 52 chr5 46734370 46734738 -152895412 + MER61D LTR ERV1 3 463 -38 2144 85 0 0 chr5 46734738 46735043 -152895107 + AluSx SINE Alu 1 305 0 1649 198 36 52 chr5 46735043 46735082 -152895068 + MER61D LTR ERV1 463 501 0 32 0 0 0 chr5 46735661 46735693 -152894457 + AT_rich Low_complexity Low_complexity 1 32 0 1406 148 0 4 chr5 46736285 46736528 -152893622 + AluSg/x SINE Alu 67 308 -4 1972 110 82 25 chr5 46739147 46739502 -152890648 + THE1C LTR MaLR 1 375 0 2011 128 3 0 chr5 46739674 46739963 -152890187 - AluSx SINE Alu -22 290 1 1056 70 0 0 chr5 46740107 46740235 -152889915 + AluY SINE Alu 1 128 -183 1700 63 0 18 chr5 46740235 46740456 -152889694 + AluY SINE Alu 85 301 -10 296 200 35 96 chr5 46740577 46740692 -152889458 - MER34 LTR ERV1 -2 540 433 1306 90 55 10 chr5 46740692 46740893 -152889257 - AluY SINE Alu -3 308 99 348 110 0 5 chr5 46740893 46740956 -152889194 - Alu SINE Alu -257 44 1 2660 225 107 84 chr5 46741036 46742128 -152888022 + LTR28 LTR ERV1 1 633 -3 2151 94 0 0 chr5 46742182 46742469 -152887681 - AluY SINE Alu -19 292 6 489 167 36 167 chr5 46742566 46742722 -152887428 - LTR8A LTR ERV1 0 727 607 2275 79 3 16 chr5 46742722 46743037 -152887113 - AluSp SINE Alu -2 311 1 489 167 36 167 chr5 46743037 46743102 -152887048 - LTR8A LTR ERV1 -120 607 535 17688 100 37 12 chr5 46743102 46745656 -152884494 - HERVH48 LTR ERV1 -4036 2618 1 2416 117 32 59 chr5 46745656 46746065 -152884085 - MER48 LTR ERV1 0 398 1 207 204 0 0 chr5 46746364 46746418 -152883732 + GA-rich Low_complexity Low_complexity 3 56 0 230 348 79 6 chr5 46746513 46746677 -152883473 - L2 LINE L2 -973 2341 2166 522 199 86 163 chr5 46746855 46746939 -152883211 + MER34C LTR ERV1 1 90 -452 1951 115 3 56 chr5 46746939 46747262 -152882888 + AluSx SINE Alu 1 306 -6 522 199 86 163 chr5 46747262 46747411 -152882739 + MER34C LTR ERV1 90 249 -293 4417 177 21 38 chr5 46747411 46748396 -152881754 - LTR5 LTR ERVK 0 969 1 522 199 86 163 chr5 46748396 46748707 -152881443 + MER34C LTR ERV1 249 492 -50 2219 51 0 51 chr5 46748710 46748857 -152881293 + AluY SINE Alu 1 125 -186 2230 50 10 13 chr5 46748857 46749159 -152880991 + AluY SINE Alu 1 301 -10 2219 51 0 51 chr5 46749159 46749323 -152880827 + AluY SINE Alu 125 296 -15 718 174 65 7 chr5 46749449 46749587 -152880563 + LTR23 LTR ERV1 1 146 -291 790 199 0 19 chr5 46749610 46749766 -152880384 + FRAM SINE Alu 20 172 -4 2245 90 0 3 chr5 46749786 46750086 -152880064 + AluSq SINE Alu 1 299 -14 461 146 12 0 chr5 46750163 46750245 -152879905 + LTR23 LTR ERV1 160 242 -195 376 125 0 0 chr5 46750264 46750320 -152879830 - Alu SINE Alu -2 298 243 1793 107 4 4 chr5 46750360 46750623 -152879527 + AluSx SINE Alu 32 294 -18 497 235 34 34 chr5 46750635 46750754 -152879396 + FLAM_A SINE Alu 1 119 -14 513 313 37 31 chr5 46751426 46751720 -152878430 + L1ME3A LINE L1 5611 5906 -264 614 105 258 8 chr5 46751745 46751869 -152878281 - MER4C LTR ERV1 -20 445 291 1499 131 131 41 chr5 46751924 46752238 -152877912 - MER4A LTR ERV1 -322 342 1 855 219 38 16 chr5 46752860 46753043 -152877107 + AluJo SINE Alu 122 308 -4 242 30 0 0 chr5 46753143 46753176 -152876974 - L1PA15 LINE L1 -6 6159 6127 1285 203 13 51 chr5 46753176 46753487 -152876663 - MER4A LTR ERV1 -362 302 4 9601 135 55 66 chr5 46753490 46753751 -152876399 - LTR49-int LTR ERV1 -485 5846 5584 2421 72 0 0 chr5 46753751 46754055 -152876095 - AluY SINE Alu -7 304 1 9601 135 55 66 chr5 46754055 46754228 -152875922 - LTR49-int LTR ERV1 -747 5584 5411 2246 99 0 0 chr5 46754228 46754530 -152875620 - AluSx SINE Alu -10 302 1 9601 135 55 66 chr5 46754530 46755054 -152875096 - LTR49-int LTR ERV1 -920 5411 4883 2162 112 3 0 chr5 46755054 46755357 -152874793 - AluSc SINE Alu -4 305 2 9601 135 55 66 chr5 46755357 46755819 -152874331 - LTR49-int LTR ERV1 -1448 4883 4417 1857 118 7 26 chr5 46755819 46756123 -152874027 + AluY SINE Alu 1 298 -13 9601 135 55 66 chr5 46756123 46756682 -152873468 - LTR49-int LTR ERV1 -1914 4417 3886 180 0 0 0 chr5 46756691 46756711 -152873439 + (T)n Simple_repeat Simple_repeat 1 20 0 249 175 0 0 chr5 46756711 46756751 -152873399 - MER58A DNA MER1_type -26 81 42 6497 68 14 19 chr5 46756909 46758531 -152871619 - SVA Other Other -723 1386 5 1448 221 36 49 chr5 46758631 46758699 -152871451 + L1MDa LINE L1 54 121 -6419 1639 109 71 11 chr5 46758699 46758982 -152871168 + AluSx SINE Alu 2 301 -11 1448 221 36 49 chr5 46758982 46759303 -152870847 + L1MDa LINE L1 121 438 -6102 1334 180 51 4 chr5 46759306 46759562 -152870588 + AluSx SINE Alu 7 274 -38 3818 229 59 45 chr5 46759570 46760215 -152869935 + L1MDa LINE L1 600 1272 -5268 2170 90 3 13 chr5 46760215 46760514 -152869636 - AluY SINE Alu -15 296 1 3818 229 59 45 chr5 46760514 46761101 -152869049 + L1MDa LINE L1 1272 1849 -4691 269 252 67 51 chr5 46761096 46761342 -152868808 - L1MEc LINE L1 -4945 1174 924 * 2053 112 3 0 chr5 46761342 46761637 -152868513 - AluSx SINE Alu -16 296 1 269 252 67 51 chr5 46761637 46761759 -152868391 - L1MEc LINE L1 -5195 924 805 2315 86 7 0 chr5 46761990 46762292 -152867858 + AluSg SINE Alu 1 304 -6 2137 88 17 0 chr5 46762424 46762718 -152867432 + AluSp SINE Alu 1 299 -14 23 0 0 0 chr5 46763434 46763457 -152866693 + AT_rich Low_complexity Low_complexity 1 23 0 2177 88 0 3 chr5 46763725 46764022 -152866128 + AluY SINE Alu 1 296 -15 294 260 41 0 chr5 46764333 46764406 -152865744 + L2 LINE L2 3187 3262 -10 2036 74 0 15 chr5 46765533 46765802 -152864348 - AluSg SINE Alu -22 288 24 571 162 0 10 chr5 46766683 46766782 -152863368 + AluJ/FLAM SINE Alu 2 99 -213 21 0 0 0 chr5 46766792 46766813 -152863337 + GC_rich Low_complexity Low_complexity 1 21 0 2315 84 0 3 chr5 46767099 46767407 -152862743 - AluY SINE Alu -4 307 1 287 98 0 0 chr5 46768330 46768374 -152861776 - AluSg SINE Alu -267 36 1 2342 84 0 0 chr5 46768379 46768687 -152861463 - AluSg SINE Alu -2 308 1 2237 97 0 0 chr5 46769483 46769783 -152860367 - AluY SINE Alu -11 300 1 323 113 0 19 chr5 46769957 46770010 -152860140 + MSTB LTR MaLR 1 52 -374 800 129 0 8 chr5 46770018 46770142 -152860008 + AluJo/FLAM SINE Alu 9 131 -181 2109 87 17 0 chr5 46770142 46770265 -152859885 + AluY SINE Alu 1 120 -191 297 0 0 0 chr5 46770265 46770298 -152859852 + (CA)n Simple_repeat Simple_repeat 2 34 0 2109 87 17 0 chr5 46770298 46770492 -152859658 + AluY SINE Alu 120 311 0 587 241 9 0 chr5 46770501 46770617 -152859533 + MSTB LTR MaLR 55 171 -255 2091 106 3 31 chr5 46771253 46771575 -152858575 - AluSq SINE Alu 0 313 1 249 355 65 16 chr5 46771721 46771845 -152858305 + L2 LINE L2 3136 3265 -7 1950 158 0 3 chr5 46771967 46772278 -152857872 - AluJb SINE Alu 0 312 3 673 169 0 73 chr5 46772287 46772423 -152857727 - AluSq/x SINE Alu -180 132 7 4893 174 31 9 chr5 46772432 46773290 -152856860 - MER49 LTR ERV1 -42 881 5 2293 179 41 19 chr5 46774974 46775438 -152854712 - MER67A LTR ERV1 -69 474 1 2613 122 72 75 chr5 46775439 46775800 -152854350 - LTR64 LTR ERVK 0 558 197 2074 99 0 0 chr5 46775800 46776106 -152854044 - AluSq SINE Alu 0 306 1 2613 122 72 75 chr5 46776106 46776173 -152853977 - LTR64 LTR ERVK -361 197 131 225 0 0 0 chr5 46776173 46776198 -152853952 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2034 112 7 0 chr5 46776200 46776487 -152853663 - AluSx SINE Alu -23 289 1 2613 122 72 75 chr5 46776487 46776611 -152853539 - LTR64 LTR ERVK -428 130 3 1324 181 120 66 chr5 46777251 46777693 -152852457 + MER31B LTR ERV1 1 466 0 932 162 7 0 chr5 46777805 46777959 -152852191 + LTR49 LTR ERV1 4 158 -437 * 969 186 50 27 chr5 46777934 46778155 -152851995 + LTR49 LTR ERV1 370 595 0 5473 156 33 45 chr5 46778157 46779676 -152850474 + LTR49-int LTR ERV1 1 1481 -4465 861 155 26 42 chr5 46779797 46780048 -152850102 + LTR49-int LTR ERV1 1378 1669 -4662 1231 185 20 73 chr5 46780066 46780322 -152849828 + LTR49-int LTR ERV1 3305 3544 -2787 1710 179 3 31 chr5 46780322 46780640 -152849510 + AluJb SINE Alu 1 309 -3 1231 185 20 73 chr5 46780640 46780685 -152849465 + LTR49-int LTR ERV1 3544 3590 -2741 2082 110 0 0 chr5 46780752 46781043 -152849107 + AluSx SINE Alu 5 295 -17 1442 184 17 24 chr5 46781105 46781393 -152848757 - AluJo SINE Alu -26 286 1 647 153 105 43 chr5 46781393 46781630 -152848520 + LTR49-int LTR ERV1 3653 4353 -2450 7400 48 11 4 chr5 46781688 46783198 -152846952 + SVA Other Other 20 1383 -3 3197 72 11 11 chr5 46783224 46783666 -152846484 + SVA Other Other 944 1385 -1 198 0 0 0 chr5 46783839 46783861 -152846289 + (A)n Simple_repeat Simple_repeat 1 22 0 2869 167 12 112 chr5 46783896 46784077 -152846073 - LTR26 LTR ERV1 -1 602 404 216 0 0 0 chr5 46784077 46784101 -152846049 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1619 115 50 57 chr5 46784103 46784382 -152845768 - AluSg SINE Alu -33 277 1 2869 167 12 112 chr5 46784382 46784866 -152845284 - LTR26 LTR ERV1 -200 403 1 2336 69 3 0 chr5 46785271 46785574 -152844576 - AluY SINE Alu -7 304 1 207 297 200 12 chr5 46785675 46785840 -152844310 + MIR SINE MIR 38 233 -29 901 267 0 30 chr5 46786412 46786674 -152843476 + AluJo SINE Alu 2 255 -57 3243 168 16 14 chr5 46786674 46787194 -152842956 - LTR26 LTR ERV1 0 603 80 1791 181 77 48 chr5 46787194 46787609 -152842541 + MSTA LTR MaLR 2 428 0 3243 168 16 14 chr5 46787609 46787641 -152842509 - LTR26 LTR ERV1 -523 80 50 1582 220 94 13 chr5 46787641 46788014 -152842136 + MSTB LTR MaLR 1 403 -23 1864 135 138 39 chr5 46788014 46788428 -152841722 - MER4A LTR ERV1 0 664 122 2064 121 3 0 chr5 46788428 46788725 -152841425 - AluSp SINE Alu -15 298 1 1864 135 138 39 chr5 46788725 46788861 -152841289 - MER4A LTR ERV1 -542 122 1 8508 117 37 72 chr5 46788866 46790497 -152839653 - MER4A-int LTR ERV1 -1 6597 5023 213 39 0 0 chr5 46790537 46790563 -152839587 + (A)n Simple_repeat Simple_repeat 1 26 0 225 0 0 0 chr5 46790892 46790917 -152839233 + (A)n Simple_repeat Simple_repeat 1 25 0 2238 81 3 0 chr5 46791968 46792265 -152837885 + AluSc SINE Alu 1 298 -11 21 0 0 0 chr5 46794350 46794371 -152835779 + GC_rich Low_complexity Low_complexity 1 21 0 2037 119 7 0 chr5 46794595 46794905 -152835245 - AluSx SINE Alu 0 312 1 1951 89 18 32 chr5 46795154 46795435 -152834715 - AluSq SINE Alu 0 313 37 184 67 0 67 chr5 46795817 46795862 -152834288 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 31 58 0 0 chr5 46796070 46796122 -152834028 + AT_rich Low_complexity Low_complexity 1 52 0 1567 129 35 0 chr5 46797335 46797590 -152832560 + AluSx SINE Alu 31 294 -18 430 126 13 86 chr5 46797603 46797754 -152832396 + MER4B-int LTR ERV1 1862 2001 -4757 * 5297 170 47 30 chr5 46797750 46798151 -152831999 + MER4B-int LTR ERV1 3879 4272 -2326 369 0 0 0 chr5 46798151 46798192 -152831958 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 1560 197 0 0 chr5 46798192 46798471 -152831679 - AluJb SINE Alu -33 279 1 5297 170 47 30 chr5 46798471 46799278 -152830872 + MER4B-int LTR ERV1 4271 5109 -1489 1634 194 3 0 chr5 46799286 46799590 -152830560 - AluJo SINE Alu -7 305 1 191 315 65 60 chr5 46799607 46799791 -152830359 - L2 LINE L2 -1 3312 3128 860 149 13 7 chr5 46799802 46799956 -152830194 - AluSc SINE Alu -3 306 152 752 97 16 32 chr5 46800068 46800192 -152829958 - AluSp SINE Alu -190 123 2 1699 188 10 0 chr5 46800331 46800640 -152829510 + AluSx SINE Alu 1 312 0 620 231 0 15 chr5 46800708 46800842 -152829308 + FLAM_C SINE Alu 1 132 -1 915 177 79 129 chr5 46800848 46801165 -152828985 + AluJb SINE Alu 2 302 0 189 0 0 0 chr5 46801196 46801217 -152828933 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1378 184 75 18 chr5 46801262 46801540 -152828610 + L1PA16 LINE L1 5859 6152 -14 216 0 0 0 chr5 46802649 46802673 -152827477 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2267 292 49 17 chr5 46803102 46804024 -152826126 - L1M4 LINE L1 -1840 4306 3356 1626 186 0 13 chr5 46804054 46804355 -152825795 + AluSx SINE Alu 1 297 -15 1556 172 47 14 chr5 46804628 46804925 -152825225 + AluJo SINE Alu 1 307 -5 218 57 57 0 chr5 46804928 46804963 -152825187 + GA-rich Low_complexity Low_complexity 4 40 0 2164 107 0 0 chr5 46805056 46805347 -152824803 + AluSq SINE Alu 1 291 -22 2742 162 49 4 chr5 46805467 46805973 -152824177 + L1MB3 LINE L1 5463 5991 -192 1043 143 0 24 chr5 46807110 46807278 -152822872 - AluSg/x SINE Alu -22 288 125 207 0 0 0 chr5 46807278 46807301 -152822849 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2124 69 0 14 chr5 46807312 46807603 -152822547 - AluY SINE Alu -24 287 1 612 265 41 6 chr5 46807707 46807877 -152822273 - MER90 LTR ERV1 0 614 439 181 243 27 27 chr5 46807916 46807990 -152822160 - MIR SINE MIR 0 262 189 2023 77 22 0 chr5 46808599 46808893 -152821257 - AluSc SINE Alu 0 300 1 1700 184 61 11 chr5 46809388 46809799 -152820351 + MER61D LTR ERV1 1 501 0 1940 107 17 0 chr5 46810141 46810431 -152819719 - AluSx SINE Alu -17 295 1 308 217 112 87 chr5 46810692 46810853 -152819297 + L1M2 LINE L1 1676 1840 -5009 872 156 134 6 chr5 46811322 46811501 -152818649 + AluSq SINE Alu 67 268 -45 401 291 33 46 chr5 46811604 46811755 -152818395 + LTR33 LTR ERVL 17 165 -356 318 26 0 0 chr5 46812441 46812480 -152817670 + (CA)n Simple_repeat Simple_repeat 2 40 0 2656 161 66 23 chr5 46813144 46813723 -152816427 - MER4B LTR ERV1 -11 768 1 2122 74 0 7 chr5 46814185 46814468 -152815682 - AluY SINE Alu -30 281 1 1889 103 40 0 chr5 46814468 46814740 -152815410 - AluSq SINE Alu -7 306 24 2501 59 0 0 chr5 46815142 46815445 -152814705 - AluY SINE Alu -8 303 1 1345 191 7 7 chr5 46816029 46816306 -152813844 - AluJb SINE Alu -31 281 5 296 24 0 24 chr5 46816460 46816502 -152813648 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 196 151 19 19 chr5 46816545 46816598 -152813552 + CT-rich Low_complexity Low_complexity 3 55 0 182 88 0 29 chr5 46817192 46817226 -152812924 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2588 32 0 3 chr5 46820340 46820652 -152809498 + AluY SINE Alu 1 311 0 186 43 0 0 chr5 46820972 46820995 -152809155 + (TTTTTG)n Simple_repeat Simple_repeat 6 28 0 26 64 0 0 chr5 46821208 46821255 -152808895 + AT_rich Low_complexity Low_complexity 1 47 0 2658 155 30 65 chr5 46822519 46822961 -152807189 + MER57-int LTR ERV1 970 1426 -5172 2740 154 141 42 chr5 46822961 46823623 -152806527 - LTR8A LTR ERV1 0 727 1 2658 155 30 65 chr5 46823623 46823928 -152806222 + MER57-int LTR ERV1 1426 2485 -4113 814 146 46 0 chr5 46823934 46824064 -152806086 + AluSq/x SINE Alu 1 136 -177 2180 88 7 3 chr5 46824064 46824358 -152805792 + AluY SINE Alu 1 295 -16 6769 161 43 51 chr5 46824358 46824573 -152805577 + MER57-int LTR ERV1 3305 3520 -3078 180 0 0 0 chr5 46824573 46824593 -152805557 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2134 101 0 0 chr5 46824600 46824887 -152805263 - AluSc SINE Alu -22 287 1 6769 161 43 51 chr5 46824887 46825320 -152804830 + MER57-int LTR ERV1 3526 3961 -2637 1748 119 4 4 chr5 46825320 46825589 -152804561 + AluSg SINE Alu 42 310 0 6769 161 43 51 chr5 46825589 46825943 -152804207 + MER57-int LTR ERV1 3961 4316 -2282 1643 193 0 0 chr5 46825943 46826239 -152803911 - AluJb SINE Alu -16 296 1 6769 161 43 51 chr5 46826239 46826583 -152803567 + MER57-int LTR ERV1 4316 4661 -1937 8924 41 20 0 chr5 46826583 46827633 -152802517 + MER11C LTR ERVK 1 1071 0 6769 161 43 51 chr5 46827633 46828093 -152802057 + MER57-int LTR ERV1 4661 5109 -1489 1460 199 7 0 chr5 46828130 46828411 -152801739 - AluJo SINE Alu -25 287 5 351 0 0 0 chr5 46828555 46828594 -152801556 + (A)n Simple_repeat Simple_repeat 1 39 0 1862 149 0 10 chr5 46828789 46829091 -152801059 + AluSx SINE Alu 1 299 -13 1452 204 0 36 chr5 46829156 46829464 -152800686 + AluJo SINE Alu 1 297 -15 281 168 103 0 chr5 46829910 46830017 -152800133 + MER57-int LTR ERV1 2281 2398 -5418 * 1131 81 25 128 chr5 46830011 46830145 -152800005 + MER57-int LTR ERV1 2808 2954 -4862 2657 7 0 3 chr5 46830145 46830448 -152799702 - AluYa5 SINE Alu -9 302 1 1131 81 25 128 chr5 46830448 46830467 -152799683 + MER57-int LTR ERV1 2954 2973 -4843 1914 97 17 30 chr5 46830467 46830765 -152799385 - AluSp SINE Alu -11 302 9 1131 81 25 128 chr5 46830765 46830845 -152799305 + MER57-int LTR ERV1 2973 3018 -4798 644 58 39 29 chr5 46830851 46830955 -152799195 + MER57-int LTR ERV1 4899 5003 -2534 563 121 10 20 chr5 46830956 46831055 -152799095 + MER57-int LTR ERV1 5250 5347 -2190 1936 80 8 4 chr5 46831169 46831432 -152798718 + AluSq SINE Alu 40 303 -10 214 301 21 65 chr5 46831705 46831798 -152798352 + MIR3 SINE MIR 10 98 -110 314 245 88 125 chr5 46831805 46832021 -152798129 - L1ME LINE L1 -5420 1110 911 690 310 52 29 chr5 46832516 46832826 -152797324 - L1ME LINE L1 -6213 327 11 346 276 55 43 chr5 46832856 46833019 -152797131 + MER5B DNA MER1_type 13 177 -1 * 513 291 17 45 chr5 46833019 46833180 -152796970 + MER5A DNA MER1_type 34 189 0 2337 66 3 7 chr5 46834003 46834305 -152795845 + AluY SINE Alu 1 301 -10 1350 158 34 127 chr5 46834387 46834572 -152795578 - AluJo SINE Alu -10 292 148 1844 127 3 20 chr5 46834572 46834864 -152795286 - AluSx SINE Alu -25 287 1 1350 158 34 127 chr5 46834864 46835000 -152795150 - AluJo SINE Alu -154 148 1 245 203 101 29 chr5 46835059 46835128 -152795022 - MER46C DNA MER2_type -1 337 264 364 267 68 20 chr5 46835155 46835283 -152794867 - MER46C DNA MER2_type -140 198 61 2152 103 0 10 chr5 46835283 46835584 -152794566 - AluSg SINE Alu -12 298 1 364 267 68 20 chr5 46835584 46835601 -152794549 - MER46C DNA MER2_type -277 61 46 2136 100 10 6 chr5 46835613 46835924 -152794226 + AluSx SINE Alu 1 312 0 2298 93 0 3 chr5 46836196 46836509 -152793641 - AluSp SINE Alu -1 312 1 2106 114 0 3 chr5 46836510 46836808 -152793342 - AluSx SINE Alu -15 297 1 2060 103 7 3 chr5 46836824 46837116 -152793034 - AluSx SINE Alu -19 293 1 353 224 0 47 chr5 46837634 46837719 -152792431 + MIR SINE MIR 161 241 -21 262 307 79 0 chr5 46838036 46838137 -152792013 - MIR SINE MIR -65 143 35 2116 114 0 7 chr5 46838146 46838453 -152791697 - AluSx SINE Alu -7 305 1 1941 120 10 7 chr5 46838824 46839125 -152791025 + AluSq SINE Alu 1 302 -11 987 54 78 0 chr5 46839334 46839463 -152790687 + MER85 DNA T2_type 1 139 0 3775 200 57 8 chr5 46839463 46840327 -152789823 + L1 LINE L1 3429 4334 -1812 2125 97 16 10 chr5 46840327 46840638 -152789512 - AluSq SINE Alu 0 313 1 2181 82 3 0 chr5 46840648 46840939 -152789211 - AluSp SINE Alu -21 292 1 17372 102 38 19 chr5 46840995 46843574 -152786576 - HERVH48 LTR ERV1 -4026 2628 1 2416 117 32 59 chr5 46843574 46843983 -152786167 - MER48 LTR ERV1 0 398 1 195 204 0 0 chr5 46844282 46844336 -152785814 + GA-rich Low_complexity Low_complexity 3 56 0 211 284 57 0 chr5 46844507 46844595 -152785555 - L2 LINE L2 -1056 2258 2166 551 181 102 170 chr5 46844776 46844857 -152785293 + MER34C LTR ERV1 40 125 -460 1883 124 3 56 chr5 46844857 46845180 -152784970 + AluSx SINE Alu 1 306 -6 551 181 102 170 chr5 46845180 46845330 -152784820 + MER34C LTR ERV1 125 243 -342 4417 177 21 38 chr5 46845330 46846315 -152783835 - LTR5 LTR ERVK 0 969 1 551 181 102 170 chr5 46846315 46846424 -152783726 + MER34C LTR ERV1 243 358 -227 342 247 121 35 chr5 46846452 46846626 -152783524 + MER34 LTR ERV1 304 492 -50 2219 51 0 51 chr5 46846629 46846775 -152783375 + AluY SINE Alu 1 124 -187 2209 56 7 10 chr5 46846775 46847077 -152783073 + AluY SINE Alu 1 301 -10 2219 51 0 51 chr5 46847077 46847242 -152782908 + AluY SINE Alu 124 296 -15 842 113 8 0 chr5 46847442 46847566 -152782584 - AluSq/x SINE Alu -187 125 1 464 246 0 35 chr5 46847574 46847688 -152782462 - L1MDa LINE L1 -6429 111 2 2038 98 3 17 chr5 46847698 46847829 -152782321 + AluSg SINE Alu 1 132 -178 5689 90 37 15 chr5 46847829 46848637 -152781513 - LTR12 LTR ERV1 0 826 1 2038 98 3 17 chr5 46848637 46848802 -152781348 + AluSg SINE Alu 132 293 -17 2095 108 3 10 chr5 46848810 46849115 -152781035 + AluSg SINE Alu 1 303 -7 253 282 196 6 chr5 46849380 46849706 -152780444 + L1MEc LINE L1 1872 2259 -4137 2204 82 0 16 chr5 46849717 46850023 -152780127 + AluSg SINE Alu 1 301 -9 260 250 26 0 chr5 46850033 46850109 -152780041 - L2 LINE L2 -1182 2132 2055 2072 92 18 0 chr5 46850775 46851059 -152779091 - AluSg SINE Alu -21 289 1 442 352 190 0 chr5 46851117 46851333 -152778817 - MIR SINE MIR 0 262 6 1598 254 82 15 chr5 46851704 46852236 -152777914 + MLT1F1 LTR MaLR 1 567 0 258 342 0 51 chr5 46852280 46852397 -152777753 + L2 LINE L2 1355 1465 -1849 534 257 98 102 chr5 46852430 46852817 -152777333 + L2 LINE L2 1603 1989 -1325 2134 94 27 0 chr5 46852817 46853115 -152777035 - AluSp SINE Alu -7 306 1 534 257 98 102 chr5 46853115 46853248 -152776902 + L2 LINE L2 1989 2121 -1193 269 231 0 138 chr5 46853301 46853431 -152776719 - MER102a DNA MER1_type -1 329 218 1026 116 7 7 chr5 46853540 46853695 -152776455 + AluSq SINE Alu 1 155 -158 23 54 0 0 chr5 46853701 46853738 -152776412 + AT_rich Low_complexity Low_complexity 1 37 0 1906 86 90 4 chr5 46853744 46854022 -152776128 - AluY SINE Alu -8 303 2 2349 75 0 0 chr5 46854025 46854318 -152775832 - AluSg SINE Alu -7 303 11 569 296 123 76 chr5 46854382 46854741 -152775409 + L2 LINE L2 2173 2566 -748 1732 149 24 7 chr5 46854741 46855036 -152775114 - AluJb SINE Alu -12 300 1 569 296 123 76 chr5 46855036 46855204 -152774946 + L2 LINE L2 2566 2725 -589 760 114 8 23 chr5 46855384 46855515 -152774635 - FLAM_C SINE Alu -4 129 1 289 282 155 10 chr5 46855631 46855734 -152774416 + L2 LINE L2 3187 3304 -9 2088 95 3 0 chr5 46855919 46856214 -152773936 - AluSx SINE Alu -16 296 1 22 0 0 0 chr5 46856390 46856412 -152773738 + GC_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr5 46857727 46857748 -152772402 + (T)n Simple_repeat Simple_repeat 1 21 0 687 101 0 10 chr5 46859459 46859558 -152770592 + FLAM_A SINE Alu 4 101 -41 243 0 0 0 chr5 46859564 46859591 -152770559 + (TTTTC)n Simple_repeat Simple_repeat 1 27 0 207 318 82 0 chr5 46859595 46859680 -152770470 - MIR SINE MIR -98 164 73 349 345 144 16 chr5 46860105 46860299 -152769851 + MIR SINE MIR 30 248 -14 1207 168 0 23 chr5 46860305 46860525 -152769625 + AluJo SINE Alu 85 299 -13 522 217 54 8 chr5 46860776 46860905 -152769245 - AluJb SINE Alu -11 301 167 2229 60 3 16 chr5 46861022 46861336 -152768814 - AluY SINE Alu -1 310 1 637 195 143 17 chr5 46861337 46861568 -152768582 - HAL1b LINE L1 -246 1102 843 414 224 79 40 chr5 46861616 46861768 -152768382 + L1MEd LINE L1 990 1147 -4972 427 155 42 0 chr5 46861787 46861858 -152768292 + MLT1A2 LTR MaLR 1 74 -300 902 267 4 25 chr5 46862384 46862624 -152767526 + MIR SINE MIR 2 236 -26 428 208 17 92 chr5 46862778 46862898 -152767252 + MIR3 SINE MIR 46 156 -52 205 333 16 24 chr5 46864046 46864172 -152765978 + (CGTG)n Simple_repeat Simple_repeat 1 125 0 338 216 0 40 chr5 46864663 46864788 -152765362 + CT-rich Low_complexity Low_complexity 1 120 0 828 145 0 0 chr5 46866141 46866272 -152763878 - FLAM_A SINE Alu 0 142 12 1796 151 0 10 chr5 46866767 46867066 -152763084 + AluJb SINE Alu 6 301 -11 2238 62 0 24 chr5 46867732 46868052 -152762098 + AluY SINE Alu 1 313 0 489 181 45 53 chr5 46868070 46868159 -152761991 - HAL1 LINE L1 -103 2404 2315 1685 166 0 45 chr5 46868159 46868472 -152761678 - AluJo SINE Alu -13 299 1 489 181 45 53 chr5 46868472 46868515 -152761635 - HAL1 LINE L1 -192 2315 2273 1614 152 16 54 chr5 46868516 46868831 -152761319 - AluJo SINE Alu -9 303 1 1177 40 23 17 chr5 46869518 46869695 -152760455 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 507 233 0 0 chr5 46869696 46869846 -152760304 + CT-rich Low_complexity Low_complexity 4 153 0 588 306 50 22 chr5 46870115 46870295 -152759855 + MIR SINE MIR 23 207 -55 2321 100 3 0 chr5 46870295 46870605 -152759545 + AluSp SINE Alu 1 311 -2 209 95 0 24 chr5 46870605 46870647 -152759503 + (TA)n Simple_repeat Simple_repeat 1 41 0 317 244 148 108 chr5 46870770 46871094 -152759056 - MLT1J LTR MaLR -65 446 110 508 158 40 164 chr5 46871202 46871278 -152758872 - MER94 DNA DNA 0 134 85 1950 95 32 14 chr5 46871278 46871561 -152758589 - AluSx SINE Alu -24 288 1 508 158 40 164 chr5 46871561 46871636 -152758514 - MER94 DNA DNA -49 85 2 2194 74 0 0 chr5 46871683 46871988 -152758162 - AluY SINE Alu 0 305 1 1927 130 0 3 chr5 46872232 46872531 -152757619 + AluSg SINE Alu 1 298 -12 2166 81 0 0 chr5 46872532 46872815 -152757335 + AluY SINE Alu 17 299 -12 2191 82 0 51 chr5 46873067 46873383 -152756767 + AluSc SINE Alu 1 300 -9 834 225 0 18 chr5 46873569 46873738 -152756412 - FRAM SINE Alu 0 166 1 2603 141 13 0 chr5 46874639 46875037 -152755113 + MER57A LTR ERV1 1 403 0 1971 92 0 7 chr5 46875133 46875404 -152754746 + AluSq SINE Alu 1 269 -44 428 243 12 35 chr5 46875551 46875720 -152754430 + GA-rich Low_complexity Low_complexity 4 168 0 1892 113 11 7 chr5 46875907 46876181 -152753969 + AluSq SINE Alu 28 302 -11 994 54 78 0 chr5 46876391 46876520 -152753630 + MER85 DNA T2_type 1 139 0 6922 182 55 53 chr5 46876520 46877384 -152752766 + L1MB1 LINE L1 3429 4290 -1878 2271 93 16 10 chr5 46877384 46877695 -152752455 - AluSq SINE Alu 0 313 1 2339 69 14 0 chr5 46877705 46877993 -152752157 - AluSp SINE Alu -21 292 1 6922 182 55 53 chr5 46877993 46878165 -152751985 + L1MB1 LINE L1 4298 4468 -1700 1695 118 118 18 chr5 46878165 46878437 -152751713 + AluSx SINE Alu 1 299 -13 6922 182 55 53 chr5 46878437 46878498 -152751652 + L1MB1 LINE L1 4468 4527 -1641 1134 156 85 31 chr5 46878498 46878536 -152751614 + MER46A DNA MER2_type 1 36 -2695 1949 140 21 0 chr5 46878536 46878822 -152751328 + AluSg SINE Alu 2 293 -17 1134 156 85 31 chr5 46878822 46879007 -152751143 + MER46A DNA MER2_type 36 236 0 6922 182 55 53 chr5 46879007 46879177 -152750973 + L1MB1 LINE L1 4527 4695 -1473 1435 127 110 101 chr5 46879177 46879485 -152750665 - AluY SINE Alu 0 311 1 6922 182 55 53 chr5 46879485 46880945 -152749205 + L1MB1 LINE L1 4695 6166 -2 2127 112 17 0 chr5 46881072 46881366 -152748784 + AluSp SINE Alu 1 299 -14 1716 162 3 30 chr5 46882634 46882937 -152747213 + AluJb SINE Alu 1 295 -17 817 278 43 24 chr5 46882991 46883246 -152746904 + MIR SINE MIR 2 261 -1 2092 122 0 7 chr5 46883407 46883714 -152746436 - AluSx SINE Alu 0 305 1 214 290 97 0 chr5 46883852 46883914 -152746236 + L2 LINE L2 3205 3272 0 807 146 7 15 chr5 46884181 46884318 -152745832 + AluJb SINE Alu 1 136 -176 723 111 43 8 chr5 46884418 46884535 -152745615 - AluSg1 SINE Alu -187 122 2 1264 118 4 72 chr5 46884636 46884873 -152745277 - AluJb SINE Alu -24 288 68 2243 86 9 29 chr5 46884976 46885291 -152744859 - AluSc SINE Alu 0 309 1 1763 221 54 98 chr5 46885497 46885873 -152744277 - L1M4 LINE L1 -5575 967 576 2429 86 0 6 chr5 46885873 46886186 -152743964 - AluY SINE Alu 0 311 1 1763 221 54 98 chr5 46886186 46886203 -152743947 - L1M4 LINE L1 -5966 576 560 1904 128 80 3 chr5 46886203 46886492 -152743658 - AluSq SINE Alu -2 311 1 1763 221 54 98 chr5 46886492 46886689 -152743461 - L1M4 LINE L1 -5982 560 402 209 264 0 0 chr5 46886722 46886775 -152743375 + MIR SINE MIR 184 236 -26 226 292 33 42 chr5 46886783 46886903 -152743247 + L2 LINE L2 2937 3055 -217 2119 118 3 20 chr5 46887332 46887637 -152742513 + AluSx SINE Alu 1 300 -12 659 269 119 13 chr5 46887812 46888039 -152742111 + HsTC2 DNA Tc2 186 436 -1462 2423 58 3 29 chr5 46888268 46888578 -152741572 + AluY SINE Alu 1 302 -9 2081 121 18 0 chr5 46888587 46888867 -152741283 + AluSx SINE Alu 1 285 -27 186 43 0 0 chr5 46888867 46888890 -152741260 + (TA)n Simple_repeat Simple_repeat 2 24 0 1187 236 143 21 chr5 46888902 46889335 -152740815 - L1ME1 LINE L1 -95 6071 5586 1880 127 15 4 chr5 46889360 46889628 -152740522 + AluSq SINE Alu 1 271 -42 1757 152 10 27 chr5 46889676 46889972 -152740178 + AluJb SINE Alu 2 292 -20 725 215 125 5 chr5 46890069 46890269 -152739881 - MER58A DNA MER1_type 0 224 1 483 196 138 20 chr5 46890320 46890494 -152739656 - L1MA10 LINE L1 -2 6332 5983 1995 95 66 0 chr5 46890582 46890856 -152739294 + AluSx SINE Alu 2 293 -19 337 253 27 0 chr5 46890856 46890931 -152739219 + AluS SINE Alu 1 77 -222 2235 204 49 11 chr5 46890931 46891461 -152738689 - L1ME1 LINE L1 -315 5851 5302 1962 231 40 38 chr5 46891475 46891981 -152738169 - LTR40a LTR ERVL -5 514 8 758 207 4 134 chr5 46891991 46892092 -152738058 - HERVL40 LTR ERVL -9 5521 5408 2075 108 52 7 chr5 46892092 46892378 -152737772 + AluSq SINE Alu 1 299 -14 758 207 4 134 chr5 46892378 46892551 -152737599 - HERVL40 LTR ERVL -122 5408 5283 285 309 25 0 chr5 46892549 46892630 -152737520 - HERVL40 LTR ERVL -172 2865 2783 * 279 349 47 41 chr5 46892630 46892892 -152737258 - MER89-int LTR ERV1 -345 6455 6111 1815 145 11 0 chr5 46893011 46893317 -152736833 - AluSx SINE Alu 0 309 1 322 263 105 48 chr5 46893362 46893571 -152736579 - HERVL40 LTR ERVL -327 2710 2490 1938 140 11 0 chr5 46893582 46893885 -152736265 - AluSx SINE Alu 0 306 1 5657 236 70 51 chr5 46894084 46894187 -152735963 - HERVL40 LTR ERVL -693 4678 4578 1846 174 0 10 chr5 46894187 46894492 -152735658 - AluJb SINE Alu -10 302 1 5657 236 70 51 chr5 46894492 46894925 -152735225 - HERVL40 LTR ERVL -793 4578 4155 1943 118 12 59 chr5 46894925 46895246 -152734904 + AluSq SINE Alu 1 306 -7 5657 236 70 51 chr5 46895246 46895715 -152734435 - HERVL40 LTR ERVL -1216 4155 3696 2243 108 0 7 chr5 46895715 46896012 -152734138 + AluSx SINE Alu 5 299 -13 5657 236 70 51 chr5 46896012 46896703 -152733447 - HERVL40 LTR ERVL -1675 3696 2044 3218 241 49 31 chr5 46896742 46897616 -152732534 - HERVL40 LTR ERVL -2595 2935 2046 2662 260 60 59 chr5 46897754 46898337 -152731813 - HERVL40 LTR ERVL -4073 1457 876 867 114 0 79 chr5 46898337 46898477 -152731673 + FLAM_C SINE Alu 1 129 -4 2662 260 60 59 chr5 46898477 46899209 -152730941 - HERVL40 LTR ERVL -4654 876 174 1427 216 50 89 chr5 46899211 46899558 -152730592 - MLT1C LTR MaLR -4 463 104 2008 113 14 0 chr5 46899558 46899842 -152730308 - AluSp SINE Alu -22 291 4 1427 216 50 89 chr5 46899842 46899857 -152730293 - MLT1C LTR MaLR -363 104 90 2472 84 7 0 chr5 46899857 46900167 -152729983 - AluSp SINE Alu -1 312 1 1427 216 50 89 chr5 46900167 46900285 -152729865 - MLT1C LTR MaLR -377 90 1 701 251 6 24 chr5 46900285 46900452 -152729698 - HERVL40 LTR ERVL -5350 180 17 1554 254 133 13 chr5 46900461 46900921 -152729229 - LTR40a LTR ERVL -4 515 1 1431 203 99 85 chr5 46900941 46900989 -152729161 - L1M4 LINE L1 -852 5294 5248 2352 99 0 3 chr5 46900989 46901303 -152728847 + AluSq SINE Alu 1 313 0 1431 203 99 85 chr5 46901303 46901470 -152728680 - L1M4 LINE L1 -898 5248 5085 2535 73 0 6 chr5 46901470 46901783 -152728367 + AluY SINE Alu 1 311 0 1431 203 99 85 chr5 46901783 46901798 -152728352 - L1M4 LINE L1 -1061 5085 5072 1690 185 11 0 chr5 46901798 46902068 -152728082 + AluJb SINE Alu 1 273 -39 1431 203 99 85 chr5 46902068 46902256 -152727894 - L1M4 LINE L1 -1074 5072 4888 2346 96 10 0 chr5 46902256 46902557 -152727593 - AluSp SINE Alu -9 304 1 1431 203 99 85 chr5 46902557 46902722 -152727428 - L1M4 LINE L1 -1258 4888 4700 1219 93 4 93 chr5 46904005 46904263 -152725887 + AluSg/x SINE Alu 70 304 -8 728 223 211 59 chr5 46904271 46904612 -152725538 + L2 LINE L2 1799 2191 -1123 725 217 45 0 chr5 46904642 46904799 -152725351 - LTR16C LTR ERVL -1 490 327 732 289 55 17 chr5 46904838 46905073 -152725077 - LTR16C LTR ERVL -244 247 4 1529 229 72 7 chr5 46905084 46905499 -152724651 + L2 LINE L2 2313 2754 -560 325 301 85 2 chr5 46905572 46905810 -152724340 + L2 LINE L2 2768 3069 -244 1459 137 0 0 chr5 46905846 46906095 -152724055 - AluSc SINE Alu 0 323 75 1912 146 36 0 chr5 46906555 46906856 -152723294 + AluJb SINE Alu 1 312 0 444 281 96 22 chr5 46907040 46907218 -152722932 + MIR SINE MIR 61 251 -11 766 186 8 8 chr5 46907304 46907433 -152722717 + FLAM_C SINE Alu 3 131 -12 2317 75 0 0 chr5 46907538 46907843 -152722307 - AluY SINE Alu 0 305 1 1657 138 85 14 chr5 46908070 46908353 -152721797 + AluJo SINE Alu 2 304 -8 25 31 0 0 chr5 46909756 46909788 -152720362 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr5 46909936 46909957 -152720193 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 2374 104 3 0 chr5 46910155 46910464 -152719686 + AluSg SINE Alu 1 310 0 2108 128 13 7 chr5 46911442 46911747 -152718403 - AluSx SINE Alu -5 307 1 387 105 0 0 chr5 46911990 46912047 -152718103 + (GGGGA)n Simple_repeat Simple_repeat 4 60 0 296 250 152 0 chr5 46912193 46912285 -152717865 - L2 LINE L2 0 3313 3208 2262 136 149 102 chr5 46912520 46912721 -152717429 - LTR29 LTR ERV1 -5 617 427 2166 135 0 3 chr5 46912721 46913032 -152717118 + AluSx SINE Alu 1 310 -2 2262 136 149 102 chr5 46913032 46913419 -152716731 - LTR29 LTR ERV1 -195 427 1 295 336 67 57 chr5 46913462 46913745 -152716405 - L2 LINE L2 -424 2890 2605 408 50 0 81 chr5 46914980 46915079 -152715071 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 984 158 16 22 chr5 46915121 46915305 -152714845 - AluSp SINE Alu 0 313 131 2145 66 7 35 chr5 46915308 46915639 -152714511 - AluSg SINE Alu 0 323 1 1227 204 58 0 chr5 46916481 46916706 -152713444 - MER8 DNA MER2_type 0 239 2 1496 126 0 0 chr5 46917327 46917526 -152712624 - AluJb SINE Alu -27 285 87 751 167 83 7 chr5 46917582 46917726 -152712424 - MLT1B LTR MaLR -46 344 190 7985 151 50 21 chr5 46917747 46918729 -152711421 - Tigger1 DNA MER2_type -944 1474 522 2377 85 3 0 chr5 46918729 46919023 -152711127 - AluY SINE Alu -16 295 1 2263 72 0 17 chr5 46919030 46919320 -152710830 - AluSg1 SINE Alu -22 287 3 7985 151 50 21 chr5 46919320 46919757 -152710393 - Tigger1 DNA MER2_type -1901 517 5 2607 134 47 0 chr5 46920216 46920625 -152709525 - MSTC LTR MaLR 0 428 1 261 254 142 16 chr5 46921457 46921635 -152708515 + MIR SINE MIR 19 216 -46 664 255 104 62 chr5 46921972 46922152 -152707998 - L1MC/D LINE L1 -2000 5808 5612 1955 103 0 4 chr5 46922152 46922413 -152707737 - AluSg SINE Alu -10 300 41 664 255 104 62 chr5 46922413 46922491 -152707659 - L1MC/D LINE L1 -2196 5612 5539 2213 105 3 10 chr5 46923004 46923300 -152706850 - AluSg SINE Alu -15 295 2 2178 102 0 29 chr5 46923302 46923615 -152706535 - AluSx SINE Alu -8 304 1 395 152 15 15 chr5 46923802 46923868 -152706282 + AluSq/x SINE Alu 45 110 -193 527 87 0 0 chr5 46923868 46923937 -152706213 + AluSp/q SINE Alu 226 294 -19 2037 137 10 0 chr5 46923987 46924287 -152705863 - AluSx SINE Alu -9 303 1 662 131 90 49 chr5 46924292 46924414 -152705736 - FLAM_C SINE Alu -15 128 2 2247 95 14 3 chr5 46924705 46925000 -152705150 + AluSx SINE Alu 1 298 -14 199 365 0 0 chr5 46925278 46925341 -152704809 + L2 LINE L2 3192 3254 -18 25 0 0 0 chr5 46925485 46925510 -152704640 + AT_rich Low_complexity Low_complexity 1 25 0 2298 102 0 0 chr5 46926313 46926607 -152703543 + AluSq SINE Alu 1 294 -19 180 0 0 0 chr5 46928086 46928106 -152702044 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 46928396 46928424 -152701726 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 46929209 46929230 -152700920 + AT_rich Low_complexity Low_complexity 1 21 0 1553 231 138 81 chr5 46929898 46930594 -152699556 - MER21B LTR ERV1 -109 754 18 2160 114 7 0 chr5 46930594 46930893 -152699257 - AluSp SINE Alu -12 301 1 2102 107 3 7 chr5 46931051 46931376 -152698774 + AluSg SINE Alu 1 310 0 1396 181 57 7 chr5 46932187 46932469 -152697681 - AluJo SINE Alu -16 296 1 316 169 169 0 chr5 46932958 46933023 -152697127 - MER5A DNA MER1_type -1 188 113 2811 96 39 0 chr5 46933023 46933386 -152696764 - MER51B LTR ERV1 0 377 1 10974 127 83 46 chr5 46933388 46933659 -152696491 - MER51B-int LTR ERV1 -1 7815 7555 2458 84 0 7 chr5 46933659 46933968 -152696182 + AluSq SINE Alu 1 307 -6 10974 127 83 46 chr5 46933968 46934040 -152696110 - MER51B-int LTR ERV1 -261 7555 7487 2498 69 0 7 chr5 46934040 46934345 -152695805 + AluSg SINE Alu 1 303 -7 10974 127 83 46 chr5 46934345 46934661 -152695489 - MER51B-int LTR ERV1 -329 7487 7184 2304 99 0 10 chr5 46934661 46934975 -152695175 - AluSx SINE Alu -1 311 1 10974 127 83 46 chr5 46934975 46935238 -152694912 - MER51B-int LTR ERV1 -632 7184 6932 2358 66 0 44 chr5 46935238 46935557 -152694593 - AluY SINE Alu -6 305 1 10974 127 83 46 chr5 46935557 46935714 -152694436 - MER51B-int LTR ERV1 -884 6932 6782 2077 102 6 38 chr5 46935714 46936027 -152694123 + AluSq SINE Alu 1 303 -10 10974 127 83 46 chr5 46936027 46936255 -152693895 - MER51B-int LTR ERV1 -1034 6782 6564 2253 102 0 16 chr5 46936255 46936559 -152693591 - AluSx SINE Alu -13 299 1 10974 127 83 46 chr5 46936559 46937098 -152693052 - MER51B-int LTR ERV1 -1252 6564 6046 2179 67 42 3 chr5 46937098 46937382 -152692768 + AluY SINE Alu 1 295 -16 10974 127 83 46 chr5 46937382 46937750 -152692400 - MER51B-int LTR ERV1 -1770 6046 5693 2217 130 0 0 chr5 46937750 46938051 -152692099 - AluSg SINE Alu -9 301 1 10974 127 83 46 chr5 46938051 46938163 -152691987 - MER51B-int LTR ERV1 -2123 5693 5250 750 50 40 0 chr5 46938164 46938265 -152691885 - MER51-int LTR ERV1 -2534 5003 4899 1214 93 33 47 chr5 46938271 46938343 -152691807 - MER51-int LTR ERV1 -4798 3018 2947 2211 91 13 16 chr5 46938343 46938650 -152691500 + AluSp SINE Alu 1 306 -7 1214 93 33 47 chr5 46938650 46938791 -152691359 - MER51-int LTR ERV1 -4869 2947 2808 3603 98 3 36 chr5 46938805 46939038 -152691112 - MER51-int LTR ERV1 -5439 2377 2138 2288 78 0 10 chr5 46939038 46939347 -152690803 - AluY SINE Alu -5 306 1 3603 98 3 36 chr5 46939347 46939587 -152690563 - MER51-int LTR ERV1 -5678 2138 1926 2404 70 3 22 chr5 46939587 46939901 -152690249 - AluY SINE Alu -3 308 1 3603 98 3 36 chr5 46939901 46940029 -152690121 - MER51-int LTR ERV1 -5890 1926 1795 1993 94 45 4 chr5 46940029 46940324 -152689826 - AluSc SINE Alu 0 306 1 1046 88 0 22 chr5 46940324 46940460 -152689690 - AluSc SINE Alu -176 133 1 672 150 80 25 chr5 46940470 46940657 -152689493 - MER4A LTR ERV1 -133 531 276 357 253 20 30 chr5 46940660 46940759 -152689391 - MER4A LTR ERV1 -566 98 1 1251 107 5 25 chr5 46940759 46940955 -152689195 - LOR1-int LTR ERV1 -6901 1219 1028 2848 72 8 11 chr5 46940955 46941331 -152688819 + L1PA5 LINE L1 5779 6153 -1 1112 81 7 7 chr5 46941332 46941481 -152688669 + AluY SINE Alu 1 149 -162 874 108 102 13 chr5 46941496 46941653 -152688497 + AluY SINE Alu 32 202 -109 696 45 18 18 chr5 46942189 46942299 -152687851 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 486 46 0 0 chr5 46942306 46942371 -152687779 + (TTCTG)n Simple_repeat Simple_repeat 2 66 0 1851 139 4 14 chr5 46942375 46942520 -152687630 - AluSx SINE Alu -35 277 135 2153 104 3 7 chr5 46942520 46942819 -152687331 - AluSx SINE Alu -14 298 1 1851 139 4 14 chr5 46942819 46942953 -152687197 - AluSx SINE Alu -177 135 1 778 145 73 0 chr5 46942953 46943133 -152687017 - FLAM_C SINE Alu 0 189 1 2645 45 7 3 chr5 46943563 46943872 -152686278 + AluY SINE Alu 2 311 0 21 0 0 0 chr5 46943935 46943956 -152686194 + AT_rich Low_complexity Low_complexity 1 21 0 1872 156 7 0 chr5 46944466 46944761 -152685389 - AluSx SINE Alu -15 297 1 309 353 8 0 chr5 46945595 46945717 -152684433 + MIR3 SINE MIR 86 208 0 3062 140 24 8 chr5 46945985 46946485 -152683665 - L1MB8 LINE L1 -2 6176 5669 1296 156 69 0 chr5 46946505 46946736 -152683414 - L1MB8 LINE L1 -615 5569 5323 2273 100 10 0 chr5 46946736 46947036 -152683114 - AluSx SINE Alu -7 305 3 2230 105 3 0 chr5 46947043 46947337 -152682813 - AluSx SINE Alu -17 295 1 1913 181 43 19 chr5 46947363 46947734 -152682416 - MSTB LTR MaLR 0 426 47 604 194 47 0 chr5 46947736 46947865 -152682285 - FRAM SINE Alu -2 174 40 2276 121 12 3 chr5 46947898 46948230 -152681920 + THE1C LTR MaLR 1 335 -40 453 216 78 20 chr5 46948248 46948350 -152681800 + AluSg/x SINE Alu 76 183 -129 377 65 0 0 chr5 46948358 46948404 -152681746 + THE1C LTR MaLR 330 375 0 897 179 0 19 chr5 46948404 46948566 -152681584 - AluJo SINE Alu -153 159 1 426 73 0 0 chr5 46948566 46948621 -152681529 - MSTB LTR MaLR -371 55 1 1370 215 13 62 chr5 46948636 46948754 -152681396 - L1MB8 LINE L1 -851 5295 5173 2285 89 0 7 chr5 46948754 46949046 -152681104 - AluSg SINE Alu -20 290 1 1370 215 13 62 chr5 46949046 46949313 -152680837 - L1MB8 LINE L1 -973 5173 4929 2042 115 45 0 chr5 46949315 46949602 -152680548 - AluSx SINE Alu -12 300 1 292 308 58 6 chr5 46949632 46949788 -152680362 - L1M4c LINE L1 -4165 2219 2056 230 270 63 45 chr5 46949949 46950060 -152680090 + L2 LINE L2 3199 3311 -2 1820 137 95 0 chr5 46950214 46950499 -152679651 + AluSx SINE Alu 1 312 0 2467 143 21 0 chr5 46950511 46950895 -152679255 - MER57A LTR ERV1 -4 399 8 410 235 143 0 chr5 46950906 46951004 -152679146 + L2 LINE L2 3160 3271 -1 1811 159 6 25 chr5 46951467 46951782 -152678368 + AluJo SINE Alu 1 309 -3 2366 86 0 3 chr5 46951880 46952181 -152677969 + AluSg SINE Alu 2 301 -9 520 247 119 58 chr5 46952216 46952459 -152677691 + MIR SINE MIR 5 262 0 896 104 0 15 chr5 46953088 46953223 -152676927 - FLAM_C SINE Alu 0 133 1 866 66 16 16 chr5 46953356 46953477 -152676673 + AluSp/q SINE Alu 179 299 -14 1794 123 39 54 chr5 46953596 46953715 -152676435 - LTR56 LTR ERV1 0 445 326 2135 125 0 0 chr5 46953715 46954012 -152676138 - AluSg1 SINE Alu -12 297 1 1794 123 39 54 chr5 46954012 46954224 -152675926 - LTR56 LTR ERV1 -119 326 119 447 133 0 0 chr5 46954230 46954305 -152675845 + Alu SINE Alu 235 309 -3 573 129 89 20 chr5 46954308 46954409 -152675741 - LTR56 LTR ERV1 -329 116 9 1777 249 95 55 chr5 46954825 46955581 -152674569 - L2 LINE L2 -81 3191 2349 228 246 9 70 chr5 46956026 46956091 -152674059 + MIR SINE MIR 141 198 -64 2307 94 7 0 chr5 46956091 46956399 -152673751 + AluSx SINE Alu 3 312 0 228 246 9 70 chr5 46956399 46956447 -152673703 + MIR SINE MIR 198 247 -15 26 0 0 0 chr5 46956701 46956727 -152673423 + AT_rich Low_complexity Low_complexity 1 26 0 489 300 35 0 chr5 46956860 46957030 -152673120 - MIR3 SINE MIR -1 207 32 2459 65 0 0 chr5 46957163 46957456 -152672694 - AluY SINE Alu -18 293 1 1657 175 3 24 chr5 46957555 46957846 -152672304 + AluJb SINE Alu 3 287 -25 2198 108 3 10 chr5 46958110 46958416 -152671734 + AluSq SINE Alu 1 304 -9 2233 105 10 22 chr5 46958628 46958942 -152671208 - AluSg SINE Alu 0 310 1 1229 266 63 37 chr5 46959133 46959561 -152670589 - MLT1J LTR MaLR -19 492 50 670 231 40 17 chr5 46959561 46959734 -152670416 + MER5B DNA MER1_type 2 178 0 1229 266 63 37 chr5 46959734 46959768 -152670382 - MLT1J LTR MaLR -461 50 18 903 239 0 55 chr5 46960046 46960339 -152669811 + AluJo SINE Alu 1 277 -35 23 54 0 0 chr5 46960619 46960656 -152669494 + AT_rich Low_complexity Low_complexity 1 37 0 188 311 49 16 chr5 46963196 46963257 -152666893 + MIR SINE MIR 117 179 -83 354 23 0 0 chr5 46963262 46963305 -152666845 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 319 263 8 38 chr5 46963397 46963530 -152666620 - L1MC5 LINE L1 -33 7928 7800 685 160 0 0 chr5 46963535 46963635 -152666515 + AluS SINE Alu 2 101 -211 2139 129 7 0 chr5 46963659 46963962 -152666188 - AluSx SINE Alu -7 305 1 1735 214 28 56 chr5 46964949 46965462 -152664688 - L1ME3A LINE L1 -4 6166 5667 1724 198 0 3 chr5 46965462 46965760 -152664390 - AluJo SINE Alu -15 297 1 1735 214 28 56 chr5 46965760 46965784 -152664366 - L1ME3A LINE L1 -503 5667 5644 5835 127 24 27 chr5 46965797 46967105 -152663045 - L1PB3 LINE L1 -3 6151 4844 485 214 27 0 chr5 46967127 46967239 -152662911 - L1PB3 LINE L1 -1878 4268 4154 2475 70 3 0 chr5 46967526 46967826 -152662324 - AluY SINE Alu -10 301 1 209 194 45 0 chr5 46967897 46967964 -152662186 + (TA)n Simple_repeat Simple_repeat 1 70 0 451 330 34 4 chr5 46967972 46968208 -152661942 - L1ME LINE L1 -303 5818 5576 555 310 140 0 chr5 46968546 46968775 -152661375 + MIR SINE MIR 2 262 0 674 246 52 11 chr5 46968784 46969121 -152661029 + MER113 DNA MER1_type? 106 521 0 245 231 154 0 chr5 46969123 46969188 -152660962 - MIR3 SINE MIR -45 163 89 234 258 68 45 chr5 46970339 46970471 -152659679 - L1ME LINE L1 -346 5775 5641 606 237 8 23 chr5 46970577 46970708 -152659442 + FLAM_A SINE Alu 1 129 -4 2200 104 3 14 chr5 46971484 46971781 -152658369 + AluSg SINE Alu 1 294 -16 1041 157 3 141 chr5 46972326 46972625 -152657525 - L1 LINE L1 -2056 4090 3833 22776 55 3 12 chr5 46972651 46976273 -152653877 - L1PA5 LINE L1 -3 6151 2555 357 298 73 84 chr5 46976643 46976918 -152653232 - HAL1 LINE L1 -2111 396 125 2242 93 7 10 chr5 46976919 46977221 -152652929 - AluSq SINE Alu -9 304 4 1849 96 8 8 chr5 46977222 46977472 -152652678 - AluSq SINE Alu -22 291 42 1842 164 16 19 chr5 46977748 46978060 -152652090 - AluJb SINE Alu -1 311 1 2092 107 31 7 chr5 46978231 46978521 -152651629 - AluSx SINE Alu -15 297 1 927 265 88 23 chr5 46978637 46978988 -152651162 - L1ME LINE L1 -2133 5675 5302 2144 100 3 35 chr5 46979002 46979321 -152650829 - AluSc SINE Alu 0 309 1 21 100 0 0 chr5 46979330 46979400 -152650750 + AT_rich Low_complexity Low_complexity 1 70 0 2259 112 0 0 chr5 46980489 46980784 -152649366 - AluSq SINE Alu -17 296 2 368 217 0 0 chr5 46981227 46981287 -152648863 + AluS SINE Alu 1 60 -248 838 186 0 18 chr5 46981345 46981512 -152648638 - AluJb SINE Alu 0 312 149 13416 111 14 24 chr5 47032938 47034988 -152595162 - L1P LINE L1 -3898 2248 220 6241 50 3 1 chr5 47035088 47036091 -152594059 + L1P2 LINE L1 4597 5600 -555 608 37 12 0 chr5 47036091 47036173 -152593977 + L1PA2 LINE L1 6073 6155 0 * 7655 35 0 0 chr5 47036171 47037175 -152592975 + L1PA4 LINE L1 5152 6155 0 760 216 28 38 chr5 47038598 47038811 -152591339 + MER112 DNA MER1_type 1 211 -49 1914 158 6 19 chr5 47039424 47039740 -152590410 - AluJo SINE Alu 0 312 1 338 171 0 29 chr5 47040319 47040389 -152589761 + LTR33A LTR ERVL 439 506 -17 261 0 0 0 chr5 47040545 47040574 -152589576 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2511 70 0 3 chr5 47040579 47040880 -152589270 - AluY SINE Alu -11 300 1 23016 59 5 1 chr5 47041053 47044446 -152585704 + L1PA6 LINE L1 2434 5837 -317 2226 117 3 0 chr5 47044579 47044877 -152585273 - AluSx SINE Alu -13 299 1 243 199 88 88 chr5 47045668 47045804 -152584346 - MIR SINE MIR -7 255 120 609 298 97 26 chr5 47047462 47047801 -152582349 - L2 LINE L2 0 3313 2951 366 222 111 30 chr5 47047813 47047948 -152582202 - LTR16C LTR ERVL -13 478 333 661 118 18 0 chr5 47048010 47048120 -152582030 + L1 LINE L1 3645 3756 -2390 228 217 0 0 chr5 47048302 47048348 -152581802 + L2 LINE L2 3262 3307 -6 283 222 0 0 chr5 47048487 47048541 -152581609 + MER96 DNA MER1_type? 16 69 -106 229 288 55 25 chr5 47049419 47049582 -152580568 - L1ME4a LINE L1 -4 6117 5950 567 318 41 0 chr5 47049752 47049947 -152580203 - L1ME4a LINE L1 -426 5695 5493 2123 149 59 55 chr5 47050223 47050274 -152579876 - MSTB LTR MaLR 0 426 377 2147 105 24 3 chr5 47050274 47050570 -152579580 - AluSg SINE Alu -8 302 1 2123 149 59 55 chr5 47050570 47050940 -152579210 - MSTB LTR MaLR -49 377 3 201 176 0 0 chr5 47052122 47052156 -152577994 + CT-rich Low_complexity Low_complexity 1 34 0 333 0 0 0 chr5 47052157 47052194 -152577956 + (TG)n Simple_repeat Simple_repeat 1 37 0 252 0 0 0 chr5 47052193 47052221 -152577929 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 444 115 21 21 chr5 47052320 47052416 -152577734 + CT-rich Low_complexity Low_complexity 4 99 0 213 232 0 80 chr5 47052699 47052824 -152577326 + A-rich Low_complexity Low_complexity 5 119 0 236 274 0 23 chr5 47052884 47053101 -152577049 + A-rich Low_complexity Low_complexity 1 211 0 297 186 59 69 chr5 47053996 47054098 -152576052 + MIR SINE MIR 112 212 -50 1887 154 0 13 chr5 47054963 47055262 -152574888 - AluJb SINE Alu -15 297 3 212 228 35 0 chr5 47055973 47056030 -152574120 + L2 LINE L2 2995 3053 -219 24 0 0 0 chr5 47056352 47056376 -152573774 + AT_rich Low_complexity Low_complexity 1 24 0 378 135 0 0 chr5 47056376 47056428 -152573722 - MER66B LTR ERV1 -140 346 295 2167 106 23 17 chr5 47056767 47057068 -152573082 + AluSx SINE Alu 1 303 -9 2188 114 0 23 chr5 47058480 47058788 -152571362 + AluSg SINE Alu 1 301 -9 814 263 47 24 chr5 47059056 47059311 -152570839 - Charlie8 DNA MER1_type -2136 281 21 623 247 149 0 chr5 47059406 47059600 -152570550 - LTR33 LTR ERVL -298 223 1 2780 198 51 2 chr5 47059868 47060458 -152569692 + L1MD2 LINE L1 5702 6320 -39 269 162 99 54 chr5 47060458 47060569 -152569581 - Charlie7 DNA MER1_type -38 2574 2459 420 226 0 12 chr5 47060579 47060663 -152569487 - Charlie7 DNA MER1_type -2512 100 18 270 231 13 26 chr5 47060899 47060977 -152569173 - L2 LINE L2 -560 2754 2678 1578 282 89 17 chr5 47061155 47061751 -152568399 + L2 LINE L2 1033 1671 -1643 2439 191 62 25 chr5 47061775 47062073 -152568077 + L1PBa LINE L1 2443 2729 -4133 2564 62 0 7 chr5 47062073 47062381 -152567769 + AluY SINE Alu 1 306 -5 2439 191 62 25 chr5 47062381 47062657 -152567493 + L1PBa LINE L1 2729 3035 -3827 2184 109 6 10 chr5 47062657 47062969 -152567181 - AluSq SINE Alu 0 313 3 2439 191 62 25 chr5 47062969 47063054 -152567096 + L1PBa LINE L1 3035 3115 -3747 3437 125 22 31 chr5 47063054 47063640 -152566510 + LTR8A LTR ERV1 1 581 -146 1678 106 35 0 chr5 47064095 47064322 -152565828 - AluSg/x SINE Alu -8 302 68 930 292 57 21 chr5 47065162 47065587 -152564563 - L2 LINE L2 -8 3305 2866 692 158 38 45 chr5 47065727 47065860 -152564290 + FLAM_C SINE Alu 1 132 -1 466 239 221 14 chr5 47066027 47066240 -152563910 - MIR SINE MIR 0 262 6 2278 95 7 7 chr5 47066531 47066825 -152563325 + AluSq SINE Alu 1 294 -19 28 0 0 0 chr5 47066963 47066991 -152563159 + AT_rich Low_complexity Low_complexity 1 28 0 30651 63 114 1 chr5 47067259 47071422 -152558728 + L1P LINE L1 2 4634 -1512 956 312 86 21 chr5 47071573 47072096 -152558054 - ERVL LTR ERVL -830 4934 4378 375 348 13 7 chr5 47072068 47072223 -152557927 - ERVL LTR ERVL -2258 3506 3351 * 1947 306 81 19 chr5 47072374 47073348 -152556802 - ERVL LTR ERVL -1911 3085 2009 532 315 77 44 chr5 47073418 47073780 -152556370 - ERVL LTR ERVL -3828 1826 1453 5520 114 65 50 chr5 47073907 47074363 -152555787 - L1MA4A LINE L1 -2 6301 5853 2301 97 3 3 chr5 47074363 47074673 -152555477 - AluSx SINE Alu -2 310 1 5520 114 65 50 chr5 47074673 47075214 -152554936 - L1MA4A LINE L1 -450 5853 5289 270 0 0 0 chr5 47075214 47075244 -152554906 + (TTA)n Simple_repeat Simple_repeat 2 31 0 5520 114 65 50 chr5 47075244 47075308 -152554842 - L1MA4A LINE L1 -1014 5289 5227 2315 84 27 0 chr5 47075589 47075886 -152554264 - AluSp SINE Alu -8 305 1 1815 200 80 37 chr5 47076660 47077125 -152553025 - MLT1D LTR MaLR 0 505 21 494 257 57 7 chr5 47077232 47077372 -152552778 - LTR16C LTR ERVL -1 490 344 213 280 89 33 chr5 47077752 47077903 -152552247 - L2 LINE L2 -334 2938 2782 371 258 0 11 chr5 47078641 47078730 -152551420 - L3 LINE CR1 -7 1570 1483 190 281 78 62 chr5 47078962 47079090 -152551060 + L2 LINE L2 3184 3313 0 412 302 69 13 chr5 47081412 47081571 -152548579 + MIR SINE MIR 47 214 -48 2411 98 0 0 chr5 47081781 47082087 -152548063 - AluSc SINE Alu -3 306 1 832 169 0 15 chr5 47083055 47083191 -152546959 - AluJo SINE Alu -178 134 1 2176 118 7 3 chr5 47083514 47083811 -152546339 - AluSx SINE Alu -12 300 3 261 290 28 37 chr5 47085361 47085468 -152544682 + MIR3 SINE MIR 88 193 -15 680 236 75 55 chr5 47085901 47086155 -152543995 - MER112 DNA MER1_type 0 260 2 334 275 22 107 chr5 47087245 47087356 -152542794 + MIR SINE MIR 85 177 -85 2322 92 13 3 chr5 47087356 47087661 -152542489 + AluSq SINE Alu 1 308 -5 334 275 22 107 chr5 47087661 47087727 -152542423 + MIR SINE MIR 177 247 -15 200 376 21 21 chr5 47090140 47090233 -152539917 + L2 LINE L2 3150 3242 -30 1666 184 161 20 chr5 47091113 47091602 -152538548 - LTR10A LTR ERV1 0 609 1 16242 224 11 29 chr5 47091602 47096729 -152533421 - LTR10A-int LTR ERV1 0 6649 2762 1506 209 26 64 chr5 47096729 47097197 -152532953 - LTR7 LTR ERV1 0 450 1 22 88 0 0 chr5 47097205 47097262 -152532888 + AT_rich Low_complexity Low_complexity 1 57 0 2618 21 0 0 chr5 47097342 47097625 -152532525 + L1PA4 LINE L1 5870 6152 -3 1012 198 0 5 chr5 47097672 47097874 -152532276 - HERVH LTR ERV1 -154 7559 7359 431 169 28 34 chr5 47098024 47098202 -152531948 + CT-rich Low_complexity Low_complexity 4 180 0 300 173 11 73 chr5 47098237 47098428 -152531722 + CT-rich Low_complexity Low_complexity 2 180 0 1949 116 49 0 chr5 47098825 47099109 -152531041 - AluSx SINE Alu -14 298 1 1088 283 54 71 chr5 47099173 47099707 -152530443 + LTR67 LTR ERVL 2 526 -31 1985 127 3 3 chr5 47101002 47101309 -152528841 + AluSx SINE Alu 1 307 0 1665 212 182 46 chr5 47101372 47102041 -152528109 - LTR41 LTR ERVL -6 767 8 386 314 97 16 chr5 47102289 47102474 -152527676 - HAL1 LINE L1 -2307 200 1 1391 227 38 48 chr5 47102700 47103097 -152527053 - MLT2C1 LTR ERVL -4 393 1 14837 61 17 7 chr5 47103847 47105841 -152524309 - L1P LINE L1 -1010 5136 3122 30 27 0 0 chr5 47106562 47106599 -152523551 + AT_rich Low_complexity Low_complexity 1 37 0 470 320 47 79 chr5 47107924 47108330 -152521820 + L2 LINE L2 2877 3269 -3 1645 162 3 114 chr5 47108750 47109083 -152521067 + AluJo SINE Alu 1 296 -6 3225 171 33 3 chr5 47109225 47109794 -152520356 - L1MC3 LINE L1 0 7785 7200 233 242 32 16 chr5 47109796 47109858 -152520292 - MLT1F1 LTR MaLR -434 133 71 881 179 22 85 chr5 47109873 47110050 -152520100 - AluJo SINE Alu -18 294 132 2056 97 23 48 chr5 47110050 47110360 -152519790 - AluSq SINE Alu -11 302 1 881 179 22 85 chr5 47110360 47110406 -152519744 - AluJo SINE Alu -180 132 85 612 256 70 42 chr5 47110616 47111056 -152519094 - MLT1H LTR MaLR -1 548 23 1484 151 37 9 chr5 47111880 47112317 -152517833 - LTR54 LTR ERV1 0 510 1 195 184 53 0 chr5 47112352 47112390 -152517760 - L2 LINE L2 -16 3256 3217 22 0 0 0 chr5 47112419 47112441 -152517709 + AT_rich Low_complexity Low_complexity 1 22 0 2178 168 40 175 chr5 47112535 47112825 -152517325 + LTR8A LTR ERV1 34 361 -366 3380 135 16 6 chr5 47112825 47113329 -152516821 - MER9 LTR ERVK -2 509 1 2178 168 40 175 chr5 47113329 47113840 -152516310 + LTR8A LTR ERV1 361 727 0 22 56 0 0 chr5 47113926 47113962 -152516188 + AT_rich Low_complexity Low_complexity 1 36 0 2376 108 46 8 chr5 47113969 47114338 -152515812 - L1PA13 LINE L1 -5 6158 5776 6201 150 26 31 chr5 47114344 47114511 -152515639 - L1PA13 LINE L1 -740 5428 5262 3934 95 54 2 chr5 47114511 47115048 -152515102 - L1PA11 LINE L1 -2 6172 5608 6201 150 26 31 chr5 47115048 47116121 -152514029 - L1PA13 LINE L1 -906 5262 4207 24 32 0 0 chr5 47116140 47116171 -152513979 + AT_rich Low_complexity Low_complexity 1 31 0 381 295 38 0 chr5 47116963 47117068 -152513082 - L2 LINE L2 -15 3298 3190 443 77 15 0 chr5 47117802 47117867 -152512283 - MER41B LTR ERV1 -87 548 483 218 192 19 0 chr5 47117994 47118046 -152512104 + (TG)n Simple_repeat Simple_repeat 2 54 0 591 149 28 0 chr5 47118081 47118188 -152511962 + L1MA6 LINE L1 6190 6299 -1 11813 105 56 63 chr5 47118303 47118693 -152511457 - L1P3 LINE L1 -3550 2911 2520 2142 135 0 0 chr5 47118693 47118989 -152511161 - AluSc SINE Alu -11 298 3 11813 105 56 63 chr5 47118989 47121349 -152508801 - L1P3 LINE L1 -3941 2520 36 1213 144 5 0 chr5 47121329 47121517 -152508633 - L1P3 LINE L1 -6271 190 2 * 391 319 57 32 chr5 47121718 47121875 -152508275 + MIR SINE MIR 27 187 -75 720 260 41 37 chr5 47121982 47122224 -152507926 + MLT1J LTR MaLR 1 243 -268 1977 154 172 27 chr5 47122242 47122650 -152507500 + MLT1C LTR MaLR 1 467 0 312 91 0 0 chr5 47122702 47122746 -152507404 + (GA)n Simple_repeat Simple_repeat 2 45 0 756 218 32 26 chr5 47122746 47122955 -152507195 - MLT1E LTR MaLR -355 212 3 2019 119 13 22 chr5 47123098 47123409 -152506741 - AluSx SINE Alu -4 308 1 841 230 100 81 chr5 47123434 47123932 -152506218 + MLT1H1 LTR MaLR 1 547 -8 2153 130 3 0 chr5 47124394 47124723 -152505427 - AluSq SINE Alu 0 330 1 748 236 134 0 chr5 47124772 47124988 -152505162 - L1ME3A LINE L1 -11 6159 5915 2370 191 93 8 chr5 47125007 47125493 -152504657 + MLT1F LTR MaLR 9 535 -7 2293 168 61 7 chr5 47125493 47125903 -152504247 - MSTB1 LTR MaLR 0 432 1 994 208 41 143 chr5 47125917 47126038 -152504112 - L1ME3A LINE L1 -270 5900 5768 2100 151 0 0 chr5 47126038 47126349 -152503801 - AluSx SINE Alu -1 311 1 994 208 41 143 chr5 47126349 47126482 -152503668 - L1ME3A LINE L1 -402 5768 5711 2160 120 0 7 chr5 47126482 47126781 -152503369 - AluSx SINE Alu -15 297 1 994 208 41 143 chr5 47126781 47126987 -152503163 - L1ME3A LINE L1 -459 5711 5486 2188 89 7 0 chr5 47126998 47127278 -152502872 - AluSp SINE Alu -29 284 3 278 170 21 0 chr5 47127839 47127886 -152502264 - L2 LINE L2 -4 3309 3262 2484 83 0 0 chr5 47128181 47128481 -152501669 + AluSg SINE Alu 1 300 -10 2193 117 0 3 chr5 47128669 47128969 -152501181 - AluSg SINE Alu -11 299 1 556 29 0 0 chr5 47128999 47129068 -152501082 + AluY SINE Alu 238 306 -4 243 0 0 0 chr5 47129139 47129166 -152500984 + (A)n Simple_repeat Simple_repeat 1 27 0 449 98 0 0 chr5 47129391 47129452 -152500698 + Alu SINE Alu 2 62 -251 * 636 116 0 12 chr5 47129449 47129535 -152500615 + AluSg/x SINE Alu 107 191 -121 1459 92 0 5 chr5 47129538 47129722 -152500428 + AluSp SINE Alu 107 289 -24 741 117 25 17 chr5 47129726 47129846 -152500304 - MLT1E3 LTR MaLR -425 199 79 963 144 144 59 chr5 47129945 47130147 -152500003 + MER20 DNA MER1_type 1 219 0 3849 130 60 0 chr5 47130258 47130827 -152499323 - LTR26 LTR ERV1 0 603 1 2065 147 0 3 chr5 47130889 47131201 -152498949 + AluSx SINE Alu 1 311 -1 2905 6 0 0 chr5 47131401 47131712 -152498438 - AluYa5 SINE Alu 0 311 1 1928 144 3 30 chr5 47131741 47132039 -152498111 + AluJo SINE Alu 1 290 -22 237 341 11 22 chr5 47132080 47132171 -152497979 + HAL1 LINE L1 2414 2503 -4 2328 100 3 3 chr5 47132361 47132670 -152497480 + AluSc SINE Alu 1 309 0 26 30 0 0 chr5 47133057 47133090 -152497060 + AT_rich Low_complexity Low_complexity 1 33 0 440 242 68 8 chr5 47133090 47133222 -152496928 + MIR SINE MIR 57 196 -66 2113 128 0 3 chr5 47133518 47133830 -152496320 + AluSx SINE Alu 1 311 -1 1835 128 6 47 chr5 47134199 47134519 -152495631 + AluJo SINE Alu 1 307 -5 605 231 65 123 chr5 47134519 47134999 -152495151 + L1MC4 LINE L1 7591 8042 0 1530 172 82 8 chr5 47135072 47135340 -152494810 - AluJo SINE Alu -24 288 1 231 207 11 23 chr5 47135971 47136058 -152494092 + GA-rich Low_complexity Low_complexity 2 87 0 2262 122 3 0 chr5 47136487 47136798 -152493352 - AluSq SINE Alu -1 312 1 243 0 0 0 chr5 47137355 47137382 -152492768 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2123 122 3 10 chr5 47137485 47137789 -152492361 + AluSq SINE Alu 1 302 -11 2442 38 35 3 chr5 47138588 47138876 -152491274 - AluY SINE Alu -14 297 1 370 253 13 0 chr5 47140591 47140670 -152489480 + L2 LINE L2 3226 3305 -8 291 349 63 0 chr5 47140910 47141051 -152489099 + MIR SINE MIR 37 184 -58 1867 148 14 0 chr5 47141321 47141605 -152488545 - AluJb SINE Alu -24 288 1 375 262 115 8 chr5 47142490 47142612 -152487538 - L2 LINE L2 -2 3270 3136 1585 127 26 85 chr5 47142671 47142978 -152487172 + L1MB7 LINE L1 5866 6154 -30 246 269 67 10 chr5 47145200 47145326 -152484824 - L1MC4 LINE L1 -1 8041 5959 225 228 0 53 chr5 47145318 47145375 -152484775 - L1MC4 LINE L1 -2065 5743 5690 * 646 300 22 31 chr5 47145375 47145602 -152484548 - MIR SINE MIR 0 262 38 602 178 156 106 chr5 47145680 47145784 -152484366 - MER5A DNA MER1_type 0 189 70 2057 130 0 0 chr5 47145784 47146094 -152484056 - AluSx SINE Alu 0 310 1 602 178 156 106 chr5 47146094 47146168 -152483982 - MER5A DNA MER1_type -119 70 1 741 255 79 41 chr5 47146191 47146463 -152483687 - L1MC4 LINE L1 -530 5634 5352 22 0 0 0 chr5 47146485 47146507 -152483643 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr5 47146657 47146692 -152483458 + AT_rich Low_complexity Low_complexity 1 35 0 703 173 0 31 chr5 47146887 47147014 -152483136 - FLAM_C SINE Alu -10 123 1 2395 97 3 0 chr5 47147024 47147332 -152482818 - AluSq SINE Alu -4 309 1 869 283 96 22 chr5 47147808 47148363 -152481787 - L1MC4 LINE L1 -1293 4853 4258 593 303 89 7 chr5 47148539 47148843 -152481307 - L1MC4 LINE L1 -2322 3824 3496 236 91 23 0 chr5 47148870 47148914 -152481236 + (TA)n Simple_repeat Simple_repeat 2 46 0 1523 138 102 25 chr5 47149072 47149296 -152480854 + AluJo SINE Alu 1 251 -61 3982 81 38 40 chr5 47149296 47149533 -152480617 - MER41A LTR ERV1 -1 553 317 2491 48 3 32 chr5 47149533 47149847 -152480303 - AluY SINE Alu -6 305 1 3982 81 38 40 chr5 47149847 47150163 -152479987 - MER41A LTR ERV1 -237 317 1 1523 138 102 25 chr5 47150163 47150213 -152479937 + AluJo SINE Alu 251 296 -16 266 50 25 0 chr5 47150429 47150469 -152479681 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 810 170 23 23 chr5 47151182 47151353 -152478797 + MER96B DNA MER1_type? 24 194 -223 266 345 36 27 chr5 47151767 47151877 -152478273 - L2 LINE L2 -8 3264 3154 1043 188 5 40 chr5 47151892 47152115 -152478035 - AluJo SINE Alu -10 302 88 205 332 195 25 chr5 47152139 47152247 -152477903 + L2 LINE L2 1945 2033 -1281 2254 100 0 7 chr5 47152247 47152546 -152477604 + AluSg1 SINE Alu 1 297 -12 205 332 195 25 chr5 47152546 47153046 -152477104 + L2 LINE L2 2033 2657 -657 1848 168 7 3 chr5 47153519 47153823 -152476327 - AluJo SINE Alu -7 305 1 785 163 23 0 chr5 47154032 47154161 -152475989 - BC200 scRNA scRNA -67 133 2 332 213 0 0 chr5 47154249 47154310 -152475840 + MER5A DNA MER1_type 9 69 -120 2367 94 3 3 chr5 47154480 47154789 -152475361 + AluSg SINE Alu 1 309 -1 741 240 134 0 chr5 47155126 47155343 -152474807 + MIR SINE MIR 5 250 -12 224 203 0 125 chr5 47155366 47155430 -152474720 + L2 LINE L2 3208 3263 -9 927 194 131 9 chr5 47155430 47155652 -152474498 + LTR41 LTR ERVL 1 249 -524 805 218 254 51 chr5 47155677 47156012 -152474138 + LTR41 LTR ERVL 360 762 -11 41393 67 8 2 chr5 47156226 47162332 -152467818 + L1PA5 LINE L1 11 6150 -4 22 35 0 0 chr5 47162451 47162480 -152467670 + AT_rich Low_complexity Low_complexity 1 29 0 984 118 6 37 chr5 47162558 47162719 -152467431 - AluJo/FRAM SINE Alu -1 311 156 696 128 27 149 chr5 47162722 47162830 -152467320 + AluJo SINE Alu 43 130 -182 2327 99 0 7 chr5 47162830 47163134 -152467016 + AluSq SINE Alu 3 304 -9 696 128 27 149 chr5 47163134 47163173 -152466977 + AluJo SINE Alu 130 172 -140 322 196 76 22 chr5 47164738 47164830 -152465320 - Charlie8 DNA MER1_type -2210 207 111 241 143 54 0 chr5 47165167 47165223 -152464927 + CT-rich Low_complexity Low_complexity 1 59 0 916 176 0 91 chr5 47165227 47165414 -152464736 - FAM SINE Alu -5 170 1 379 252 44 69 chr5 47166280 47166439 -152463711 + MER5A DNA MER1_type 35 189 0 241 338 79 21 chr5 47166701 47166842 -152463308 + MIR3 SINE MIR 8 173 -35 1375 178 12 4 chr5 47166862 47167120 -152463030 + MER33 DNA MER1_type 1 260 -64 965 220 45 89 chr5 47167123 47167465 -152462685 + MLT1A1 LTR MaLR 1 326 -39 557 114 23 0 chr5 47167465 47167553 -152462597 + MER21A LTR ERV1 1 90 -841 352 94 0 0 chr5 47167555 47167608 -152462542 - Alu SINE Alu -2 300 248 817 100 0 18 chr5 47167608 47167718 -152462432 - AluSg1 SINE Alu -201 108 1 3736 135 74 135 chr5 47167718 47168134 -152462016 + MER21A LTR ERV1 71 511 -420 533 149 0 0 chr5 47168134 47168208 -152461942 - AluJ/FLAM SINE Alu -237 75 2 3736 135 74 135 chr5 47168208 47168289 -152461861 + MER21A LTR ERV1 511 595 -336 7882 100 8 26 chr5 47168289 47169379 -152460771 + MER11C LTR ERVK 1 1071 0 3736 135 74 135 chr5 47169379 47169724 -152460426 + MER21A LTR ERV1 595 931 0 274 108 0 0 chr5 47169726 47169763 -152460387 + MLT1A1 LTR MaLR 360 396 0 1434 188 8 16 chr5 47170172 47170422 -152459728 + AluJo SINE Alu 1 248 -64 201 121 0 0 chr5 47171559 47171592 -152458558 + (TA)n Simple_repeat Simple_repeat 2 34 0 2063 134 0 0 chr5 47171596 47171887 -152458263 - AluSq SINE Alu -22 291 1 228 235 130 31 chr5 47172136 47172298 -152457852 - L1ME4a LINE L1 -2 6119 5942 415 286 10 20 chr5 47172322 47172420 -152457730 - L2 LINE L2 -30 3242 3146 2062 118 21 0 chr5 47172529 47172818 -152457332 - AluSx SINE Alu -17 295 1 289 284 34 89 chr5 47172848 47172925 -152457225 - L1ME4a LINE L1 -317 5804 5724 1807 171 3 3 chr5 47172925 47173217 -152456933 - AluJb SINE Alu -20 292 1 289 284 34 89 chr5 47173217 47173375 -152456775 - L1ME4a LINE L1 -397 5724 5582 295 271 65 19 chr5 47173775 47173882 -152456268 - MER91A DNA MER1_type -84 112 1 233 264 32 52 chr5 47174527 47174682 -152455468 - L1MC/D LINE L1 -1925 5883 5732 2237 115 0 0 chr5 47174793 47175088 -152455062 - AluSg SINE Alu -15 295 1 1773 168 7 3 chr5 47175108 47175406 -152454744 + AluJb SINE Alu 1 299 -13 257 182 91 52 chr5 47175406 47175483 -152454667 - L1MC/D LINE L1 -477 5644 5565 275 270 63 0 chr5 47175544 47175607 -152454543 + L2 LINE L2 3204 3270 -2 200 194 56 0 chr5 47176251 47176287 -152453863 - MIR SINE MIR -139 123 86 346 304 180 55 chr5 47176361 47176871 -152453279 + L1MC4a LINE L1 4692 5265 -881 2142 98 11 0 chr5 47176928 47177213 -152452937 + AluSx SINE Alu 1 288 -24 28 0 0 0 chr5 47177213 47177241 -152452909 + AT_rich Low_complexity Low_complexity 1 28 0 985 271 128 25 chr5 47177241 47177728 -152452422 + L1MC4a LINE L1 5315 5863 -1945 2314 86 7 10 chr5 47177728 47178029 -152452121 + AluSq SINE Alu 1 300 -13 985 271 128 25 chr5 47178029 47178072 -152452078 + L1MC4a LINE L1 5863 5900 -1908 2112 97 50 0 chr5 47178195 47178473 -152451677 - AluSx SINE Alu -20 292 1 1965 220 222 2 chr5 47178587 47179123 -152451027 - MLT1E1 LTR MaLR 0 654 1 828 252 117 5 chr5 47179170 47179392 -152450758 - MIR SINE MIR -10 252 6 1228 159 5 10 chr5 47179438 47179646 -152450504 + AluJb SINE Alu 85 291 -21 1641 233 128 39 chr5 47179659 47180175 -152449975 - MLT1G1 LTR MaLR -2 593 32 2453 128 27 3 chr5 47180388 47180717 -152449433 - MER1B DNA MER1_type 0 337 1 267 254 0 0 chr5 47180913 47180972 -152449178 - L2 LINE L2 0 3313 3255 21 0 0 0 chr5 47181343 47181364 -152448786 + AT_rich Low_complexity Low_complexity 1 21 0 521 267 89 0 chr5 47181368 47181503 -152448647 + MER119 DNA MER1_type 3 149 -434 * 567 178 37 44 chr5 47181484 47181526 -152448624 + MER119 DNA MER1_type 449 490 -93 2297 112 0 0 chr5 47181526 47181830 -152448320 + AluSx SINE Alu 1 304 -8 567 178 37 44 chr5 47181830 47181922 -152448228 + MER119 DNA MER1_type 490 582 -1 190 244 183 0 chr5 47182809 47182891 -152447259 - L2 LINE L2 -336 2977 2881 1951 114 16 54 chr5 47183031 47183348 -152446802 - AluSx SINE Alu -7 305 1 500 325 108 35 chr5 47183549 47184077 -152446073 + L2 LINE L2 2709 3264 -8 2260 105 7 0 chr5 47184159 47184455 -152445695 - AluSx SINE Alu -14 298 1 211 258 247 10 chr5 47184681 47184778 -152445372 - MIR3 SINE MIR -7 201 82 793 239 129 32 chr5 47184927 47185202 -152444948 + MLT1D LTR MaLR 13 314 -312 1134 191 194 50 chr5 47185202 47185245 -152444905 - MLT1A1 LTR MaLR 0 365 330 2217 99 7 7 chr5 47185245 47185547 -152444603 + AluSq SINE Alu 1 302 -11 1134 191 194 50 chr5 47185547 47185822 -152444328 - MLT1A1 LTR MaLR -35 330 1 1168 202 5 0 chr5 47185822 47186030 -152444120 + MLT1D LTR MaLR 296 504 -1 528 281 128 42 chr5 47187368 47188008 -152442142 - L1ME4a LINE L1 -13 6108 5414 1959 121 3 67 chr5 47188108 47188439 -152441711 - AluSq SINE Alu -3 310 1 1971 110 21 11 chr5 47188764 47189090 -152441060 - AluSq SINE Alu 0 329 1 762 151 71 24 chr5 47190113 47190239 -152439911 + AluJ SINE Alu 2 133 -169 1071 180 10 35 chr5 47190257 47190457 -152439693 + AluJ SINE Alu 118 312 0 2319 95 7 3 chr5 47190464 47190770 -152439380 + AluY SINE Alu 1 307 -4 788 233 74 6 chr5 47191512 47191688 -152438462 + MER5A DNA MER1_type 2 189 0 1977 113 49 3 chr5 47192175 47192481 -152437669 + AluSx SINE Alu 1 312 0 41807 65 7 6 chr5 47192512 47198648 -152431502 - L1PA5 LINE L1 -1 6153 11 805 218 254 51 chr5 47198862 47199197 -152430953 - LTR41 LTR ERVL -11 762 360 927 194 131 9 chr5 47199222 47199444 -152430706 - LTR41 LTR ERVL -524 249 1 224 203 0 125 chr5 47199444 47199508 -152430642 - L2 LINE L2 -9 3263 3208 741 240 134 0 chr5 47199531 47199748 -152430402 - MIR SINE MIR -12 250 5 2367 94 3 3 chr5 47200085 47200394 -152429756 - AluSg SINE Alu -1 309 1 332 213 0 0 chr5 47200564 47200625 -152429525 - MER5A DNA MER1_type -120 69 9 752 163 8 8 chr5 47200713 47200842 -152429308 + FLAM_C SINE Alu 2 130 -3 1868 174 3 3 chr5 47201051 47201356 -152428794 + AluJo SINE Alu 1 305 -7 205 332 195 25 chr5 47201829 47202329 -152427821 - L2 LINE L2 -657 2657 2033 2254 100 0 7 chr5 47202329 47202628 -152427522 - AluSg1 SINE Alu -12 297 1 205 332 195 25 chr5 47202628 47202736 -152427414 - L2 LINE L2 -1281 2033 1945 1043 188 5 40 chr5 47202760 47202983 -152427167 + AluJo SINE Alu 88 302 -10 266 345 36 27 chr5 47202998 47203108 -152427042 + L2 LINE L2 3154 3264 -8 810 170 23 23 chr5 47203522 47203693 -152426457 - MER96B DNA MER1_type? -223 194 24 266 50 25 0 chr5 47204406 47204446 -152425704 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 1523 138 102 25 chr5 47204662 47204712 -152425438 - AluJo SINE Alu -16 296 251 3982 81 38 40 chr5 47204712 47205028 -152425122 + MER41A LTR ERV1 1 317 -237 2491 48 3 32 chr5 47205028 47205342 -152424808 + AluY SINE Alu 1 305 -6 3982 81 38 40 chr5 47205342 47205579 -152424571 + MER41A LTR ERV1 317 553 -1 1523 138 102 25 chr5 47205579 47205803 -152424347 - AluJo SINE Alu -61 251 1 236 91 23 0 chr5 47205961 47206005 -152424145 + (TA)n Simple_repeat Simple_repeat 2 46 0 593 303 89 7 chr5 47206032 47206336 -152423814 + L1MC4 LINE L1 3496 3824 -2322 869 283 96 22 chr5 47206512 47207067 -152423083 + L1MC4 LINE L1 4258 4853 -1293 2395 97 3 0 chr5 47207543 47207851 -152422299 + AluSq SINE Alu 1 309 -4 703 173 0 31 chr5 47207861 47207988 -152422162 + FLAM_C SINE Alu 1 123 -10 21 57 0 0 chr5 47208183 47208218 -152421932 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr5 47208368 47208390 -152421760 + AT_rich Low_complexity Low_complexity 1 22 0 741 255 79 41 chr5 47208412 47208684 -152421466 + L1MC4 LINE L1 5352 5634 -530 602 178 156 106 chr5 47208707 47208781 -152421369 + MER5A DNA MER1_type 1 70 -119 2058 130 0 0 chr5 47208781 47209091 -152421059 + AluSx SINE Alu 1 310 0 602 178 156 106 chr5 47209091 47209195 -152420955 + MER5A DNA MER1_type 70 189 0 646 300 22 31 chr5 47209273 47209500 -152420650 + MIR SINE MIR 38 262 0 225 228 0 53 chr5 47209500 47209557 -152420593 + L1MC4 LINE L1 5690 5743 -2065 * 246 269 67 10 chr5 47209549 47209675 -152420475 + L1MC4 LINE L1 5959 8041 -1 1585 127 26 85 chr5 47211898 47212205 -152417945 - L1MB7 LINE L1 -30 6154 5866 375 262 115 8 chr5 47212264 47212386 -152417764 + L2 LINE L2 3136 3270 -2 1867 148 14 0 chr5 47213272 47213556 -152416594 + AluJb SINE Alu 1 288 -24 291 349 63 0 chr5 47213826 47213967 -152416183 - MIR SINE MIR -58 150 37 370 253 13 0 chr5 47214207 47214286 -152415864 - L2 LINE L2 -8 3305 3226 2442 38 35 3 chr5 47216001 47216289 -152413861 + AluY SINE Alu 1 297 -14 2168 121 0 10 chr5 47217088 47217393 -152412757 - AluSq SINE Alu -11 302 1 243 0 0 0 chr5 47217496 47217523 -152412627 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2262 122 3 0 chr5 47218080 47218391 -152411759 + AluSq SINE Alu 1 312 -1 231 207 11 23 chr5 47218820 47218907 -152411243 + CT-rich Low_complexity Low_complexity 2 87 0 1530 172 82 8 chr5 47219538 47219806 -152410344 + AluJo SINE Alu 1 288 -24 605 231 65 123 chr5 47219879 47220359 -152409791 - L1MC4 LINE L1 0 8042 7591 1835 128 6 47 chr5 47220359 47220679 -152409471 - AluJo SINE Alu -5 307 1 2113 128 0 3 chr5 47221048 47221360 -152408790 - AluSx SINE Alu -1 311 1 440 242 68 8 chr5 47221656 47221788 -152408362 - MIR SINE MIR -66 196 57 26 30 0 0 chr5 47221788 47221821 -152408329 + AT_rich Low_complexity Low_complexity 1 33 0 2328 100 3 3 chr5 47222208 47222517 -152407633 - AluSc SINE Alu 0 309 1 237 341 11 22 chr5 47222707 47222798 -152407352 - HAL1 LINE L1 -4 2503 2414 1928 144 3 30 chr5 47222839 47223137 -152407013 - AluJo SINE Alu -22 290 1 2905 6 0 0 chr5 47223166 47223477 -152406673 + AluYa5 SINE Alu 1 311 0 2065 147 0 3 chr5 47223677 47223989 -152406161 - AluSx SINE Alu -1 311 1 3849 130 60 0 chr5 47224051 47224620 -152405530 + LTR26 LTR ERV1 1 603 0 963 144 144 59 chr5 47224731 47224933 -152405217 - MER20 DNA MER1_type 0 219 1 741 117 25 17 chr5 47225032 47225152 -152404998 + MLT1E3 LTR MaLR 79 199 -425 1459 92 0 5 chr5 47225156 47225340 -152404810 - AluSp SINE Alu -24 289 107 636 116 0 12 chr5 47225343 47225429 -152404721 - AluSg/x SINE Alu -121 191 107 449 98 0 0 chr5 47225426 47225487 -152404663 - Alu SINE Alu -251 62 2 * 243 0 0 0 chr5 47225712 47225739 -152404411 + (T)n Simple_repeat Simple_repeat 1 27 0 556 29 0 0 chr5 47225810 47225879 -152404271 - AluY SINE Alu -4 308 240 2193 117 0 3 chr5 47225909 47226209 -152403941 + AluSg SINE Alu 1 299 -11 2484 83 0 0 chr5 47226397 47226697 -152403453 - AluSg SINE Alu -10 300 1 278 170 21 0 chr5 47226992 47227039 -152403111 + L2 LINE L2 3262 3309 -4 2188 89 7 0 chr5 47227600 47227880 -152402270 + AluSp SINE Alu 3 284 -29 994 208 41 143 chr5 47227891 47228097 -152402053 + L1ME3A LINE L1 5486 5711 -459 2160 120 0 7 chr5 47228097 47228396 -152401754 + AluSx SINE Alu 1 297 -15 994 208 41 143 chr5 47228396 47228529 -152401621 + L1ME3A LINE L1 5711 5768 -402 2100 151 0 0 chr5 47228529 47228840 -152401310 + AluSx SINE Alu 1 311 -1 994 208 41 143 chr5 47228840 47228961 -152401189 + L1ME3A LINE L1 5768 5900 -270 2293 168 61 7 chr5 47228975 47229385 -152400765 + MSTB1 LTR MaLR 1 432 0 2193 202 82 22 chr5 47229385 47229882 -152400268 - MLT1F LTR MaLR -7 535 9 696 221 25 0 chr5 47229901 47230059 -152400091 + L1ME3A LINE L1 5915 6076 -94 243 217 0 33 chr5 47230129 47230166 -152399984 + GA-rich Low_complexity Low_complexity 3 39 -21 2166 130 3 0 chr5 47230166 47230473 -152399677 + AluSq SINE Alu 1 308 -5 243 217 0 33 chr5 47230473 47230495 -152399655 + GA-rich Low_complexity Low_complexity 39 60 0 702 232 94 97 chr5 47230957 47231350 -152398800 - MLT1H1 LTR MaLR -8 547 156 303 176 162 14 chr5 47231381 47231455 -152398695 - MLT1H1 LTR MaLR -457 85 1 2022 119 13 22 chr5 47231480 47231791 -152398359 + AluSx SINE Alu 1 308 -4 656 205 17 19 chr5 47231934 47232115 -152398035 + MLT1E LTR MaLR 3 185 -382 555 56 0 0 chr5 47232121 47232192 -152397958 + (TC)n Simple_repeat Simple_repeat 2 72 0 1759 155 174 27 chr5 47232244 47232651 -152397499 - MLT1C LTR MaLR 0 467 1 635 269 37 33 chr5 47232669 47232911 -152397239 - MLT1J LTR MaLR -268 243 1 394 319 57 32 chr5 47233018 47233175 -152396975 - MIR SINE MIR -75 187 27 1138 144 5 0 chr5 47233376 47233564 -152396586 + L1P3 LINE L1 2 190 -6271 * 11124 104 56 63 chr5 47233544 47235905 -152394245 + L1P3 LINE L1 36 2520 -3941 2164 135 0 0 chr5 47235905 47236201 -152393949 + AluSc SINE Alu 3 298 -11 11124 104 56 63 chr5 47236201 47236591 -152393559 + L1P3 LINE L1 2520 2911 -3550 537 149 28 0 chr5 47236706 47236813 -152393337 - L1MA6 LINE L1 -1 6299 6190 218 192 19 0 chr5 47236848 47236900 -152393250 + (CA)n Simple_repeat Simple_repeat 2 54 0 408 77 15 0 chr5 47237027 47237092 -152393058 + MER41A LTR ERV1 402 467 -87 377 295 38 0 chr5 47237826 47237931 -152392219 + L2 LINE L2 3190 3298 -15 24 32 0 0 chr5 47238723 47238754 -152391396 + AT_rich Low_complexity Low_complexity 1 31 0 3548 167 17 11 chr5 47238773 47239492 -152390658 + L1P LINE L1 4207 4929 -1217 672 229 0 66 chr5 47239615 47239798 -152390352 + LTR8A LTR ERV1 557 727 0 5595 220 13 9 chr5 47239798 47241243 -152388907 + L1 LINE L1 2396 3846 -2300 4649 140 25 0 chr5 47241244 47242008 -152388142 + L1P LINE L1 1 783 -5363 21115 51 12 13 chr5 47242110 47245029 -152385121 - L1P LINE L1 -1598 4548 1632 1948 154 3 59 chr5 47245389 47245745 -152384405 + MER1B DNA MER1_type 2 337 0 2135 118 10 0 chr5 47245909 47246213 -152383937 - AluSx SINE Alu -5 307 1 25 31 0 0 chr5 47246240 47246272 -152383878 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr5 47248342 47248372 -152381778 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 47248674 47248696 -152381454 + AT_rich Low_complexity Low_complexity 1 22 0 2195 108 10 0 chr5 47248732 47249027 -152381123 - AluSx SINE Alu -13 299 2 2175 112 3 0 chr5 47250133 47250420 -152379730 + AluSp SINE Alu 1 288 -25 1177 164 0 0 chr5 47250750 47250927 -152379223 + AluSg/x SINE Alu 124 300 -12 631 317 84 28 chr5 47250944 47251300 -152378850 + HAL1b LINE L1 60 435 -913 1814 155 16 16 chr5 47251625 47251929 -152378221 - AluJo SINE Alu -8 304 1 719 260 105 0 chr5 47252117 47252317 -152377833 - MIR SINE MIR -34 228 8 1956 101 50 22 chr5 47252455 47252764 -152377386 - AluSq SINE Alu 0 317 1 409 284 135 18 chr5 47252764 47252891 -152377259 - MIR SINE MIR -12 250 139 5210 109 23 45 chr5 47252891 47253431 -152376719 + L1PB4 LINE L1 5137 5654 -502 2048 153 0 10 chr5 47253431 47253744 -152376406 + AluJb SINE Alu 2 311 -1 5210 109 23 45 chr5 47253744 47254236 -152375914 + L1PB4 LINE L1 5654 6156 0 409 284 135 18 chr5 47254236 47254330 -152375820 - MIR SINE MIR -123 139 3 454 171 133 19 chr5 47254465 47254570 -152375580 - L2 LINE L2 -2 3311 3195 198 0 0 0 chr5 47255846 47255868 -152374282 + (T)n Simple_repeat Simple_repeat 1 22 0 270 337 22 0 chr5 47256081 47256170 -152373980 + MLT1K LTR MaLR 159 249 -339 2342 207 67 34 chr5 47256675 47256779 -152373371 + L1ME1 LINE L1 4657 4756 -1410 1994 141 10 0 chr5 47256779 47257070 -152373080 + AluJo SINE Alu 1 294 -18 2342 207 67 34 chr5 47257070 47257176 -152372974 + L1ME1 LINE L1 4756 4857 -1309 2219 112 3 19 chr5 47257176 47257490 -152372660 - AluSx SINE Alu -3 309 1 1089 214 103 53 chr5 47257492 47257773 -152372377 - AluJb SINE Alu -7 295 1 2342 207 67 34 chr5 47257773 47258748 -152371402 + L1ME1 LINE L1 4857 5894 -272 1034 176 31 39 chr5 47258748 47258983 -152371167 + L1MC2 LINE L1 6082 6316 -28 2013 138 165 5 chr5 47258983 47259352 -152370798 - MSTA LTR MaLR 0 428 1 1034 176 31 39 chr5 47259352 47259372 -152370778 + L1MC2 LINE L1 6316 6335 -9 26 0 0 0 chr5 47259404 47259430 -152370720 + AT_rich Low_complexity Low_complexity 1 26 0 931 179 6 12 chr5 47259541 47259714 -152370436 - AluJb SINE Alu -18 294 123 1920 155 0 10 chr5 47259735 47260039 -152370111 - AluJb SINE Alu -11 301 1 681 262 29 44 chr5 47260055 47260330 -152369820 + L1ME1 LINE L1 5891 6161 -5 341 300 45 41 chr5 47260987 47261267 -152368883 + L1MEc LINE L1 2113 2435 -3807 26 0 0 0 chr5 47261367 47261393 -152368757 + AT_rich Low_complexity Low_complexity 1 26 0 3517 127 11 0 chr5 47261427 47261948 -152368202 - MER1A DNA MER1_type 0 527 1 12900 168 41 14 chr5 47262017 47264462 -152365688 + L1MA1 LINE L1 14 2525 -5040 650 50 119 0 chr5 47264462 47264622 -152365528 + L1P LINE L1 3029 3207 -2939 236 146 0 0 chr5 47264722 47264763 -152365387 + L1MA1 LINE L1 2485 2525 -5040 19315 32 11 10 chr5 47264763 47267902 -152362248 + L1PA4 LINE L1 3028 6152 -3 4951 152 119 13 chr5 47267907 47268803 -152361347 + L1MA1 LINE L1 2441 3549 -4016 1737 183 0 49 chr5 47268803 47269131 -152361019 + AluSx SINE Alu 1 312 0 4951 152 119 13 chr5 47269131 47269670 -152360480 + L1MA1 LINE L1 3549 4030 -3535 248 111 22 22 chr5 47269696 47269741 -152360409 + MER4A LTR ERV1 54 98 -566 1216 157 7 62 chr5 47269741 47269932 -152360218 + MER4A LTR ERV1 262 490 -174 4273 53 7 18 chr5 47269932 47270496 -152359654 - LTR6B LTR ERV1 0 558 1 1216 157 7 62 chr5 47270496 47270606 -152359544 + MER4A LTR ERV1 490 605 -59 2503 202 40 0 chr5 47270706 47271299 -152358851 + L1MA1 LINE L1 4028 4644 -2921 * 5891 171 8 40 chr5 47271286 47271660 -152358490 + L1MA1 LINE L1 5082 5466 -2255 4529 107 7 19 chr5 47271660 47272140 -152358010 + MER4A LTR ERV1 1 472 -192 2022 155 3 7 chr5 47272140 47272444 -152357706 - AluSx SINE Alu -9 303 1 4529 107 7 19 chr5 47272444 47272635 -152357515 + MER4A LTR ERV1 472 664 0 5891 171 8 40 chr5 47272635 47274860 -152355290 + L1MA1 LINE L1 5466 7477 -244 2326 103 0 0 chr5 47274860 47275170 -152354980 + AluSg SINE Alu 1 310 0 5891 171 8 40 chr5 47275170 47275240 -152354910 + L1MA1 LINE L1 7477 7548 -173 * 8301 65 36 9 chr5 47275237 47276482 -152353668 + L1PA7 LINE L1 4110 5427 -727 2391 94 7 0 chr5 47276482 47276790 -152353360 + AluSp SINE Alu 2 311 -2 8301 65 36 9 chr5 47276790 47277537 -152352613 + L1PA7 LINE L1 5427 6152 -2 1136 268 155 32 chr5 47277914 47278500 -152351650 + MLT2F LTR ERVL 6 663 0 261 0 0 0 chr5 47278511 47278540 -152351610 + (T)n Simple_repeat Simple_repeat 1 29 0 296 230 0 20 chr5 47278570 47278670 -152351480 + L1ME4a LINE L1 4561 4658 -1488 27 0 0 0 chr5 47278883 47278910 -152351240 + AT_rich Low_complexity Low_complexity 1 27 0 1570 196 19 19 chr5 47278912 47279223 -152350927 + AluJo SINE Alu 1 311 -1 2303 72 10 23 chr5 47279309 47279615 -152350535 + AluSg SINE Alu 1 302 -8 254 232 71 0 chr5 47279807 47279863 -152350287 - LTR67 LTR ERVL -385 172 113 426 183 0 12 chr5 47279962 47280044 -152350106 + Tigger5 DNA MER2_type 2243 2323 0 657 293 126 19 chr5 47280649 47281277 -152348873 + L1ME4a LINE L1 5257 5951 -170 21 0 0 0 chr5 47281518 47281539 -152348611 + AT_rich Low_complexity Low_complexity 1 21 0 1787 162 3 32 chr5 47282315 47282624 -152347526 - AluJo SINE Alu -12 300 1 2604 42 0 7 chr5 47282799 47283105 -152347045 - AluY SINE Alu -7 304 1 1623 166 52 28 chr5 47283108 47283398 -152346752 - AluJo SINE Alu -10 302 6 879 124 87 62 chr5 47283692 47283837 -152346313 + MLT1F LTR MaLR 325 531 -64 2349 68 0 3 chr5 47283837 47284144 -152346006 - AluY SINE Alu -5 306 1 879 124 87 62 chr5 47284144 47284209 -152345941 + MLT1F LTR MaLR 531 593 -2 1975 140 16 3 chr5 47287230 47287538 -152342612 - AluJo SINE Alu 0 312 1 315 261 185 27 chr5 47287589 47287773 -152342377 - L2 LINE L2 -105 3208 2996 1890 171 0 16 chr5 47288286 47288602 -152341548 + AluJo SINE Alu 1 311 -1 26 50 0 0 chr5 47288720 47288760 -152341390 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr5 47289620 47289643 -152340507 + AT_rich Low_complexity Low_complexity 1 23 0 3083 117 11 2 chr5 47341824 47342260 -152287890 + MER41C-int LTR ERV1 7317 7756 0 3333 152 49 9 chr5 47342260 47342580 -152287570 + MER41C LTR ERV1 1 352 -202 207 0 0 0 chr5 47342580 47342603 -152287547 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3333 152 49 9 chr5 47342603 47342815 -152287335 + MER41C LTR ERV1 352 554 0 14594 164 111 107 chr5 47342820 47345330 -152284820 - LTR49-int LTR ERV1 -87 6244 3747 1864 183 3 10 chr5 47345330 47345642 -152284508 - AluJb SINE Alu -2 310 1 14594 164 111 107 chr5 47345642 47346046 -152284104 - LTR49-int LTR ERV1 -2584 3747 3346 2235 114 0 7 chr5 47346046 47346345 -152283805 - AluSq SINE Alu -16 297 1 14594 164 111 107 chr5 47346345 47346583 -152283567 - LTR49-int LTR ERV1 -2985 3346 3111 2447 167 23 46 chr5 47346583 47346868 -152283282 + MSTB LTR MaLR 1 274 -152 2150 141 0 3 chr5 47346868 47347181 -152282969 - AluSx SINE Alu 0 312 1 2447 167 23 46 chr5 47347181 47347331 -152282819 + MSTB LTR MaLR 274 426 0 14594 164 111 107 chr5 47347331 47347432 -152282718 - LTR49-int LTR ERV1 -3220 3111 3012 1176 154 4 68 chr5 47347432 47347635 -152282515 + AluJb SINE Alu 87 275 -37 2218 155 119 18 chr5 47347635 47348022 -152282128 + MSTB LTR MaLR 1 426 0 1176 154 4 68 chr5 47348022 47348052 -152282098 + AluJb SINE Alu 275 305 -7 14594 164 111 107 chr5 47348052 47348889 -152281261 - LTR49-int LTR ERV1 -3319 3012 1895 10276 30 21 129 chr5 47348889 47350461 -152279689 - SVA Other Other 0 1386 17 14594 164 111 107 chr5 47350461 47350688 -152279462 - LTR49-int LTR ERV1 -4436 1895 1670 372 158 45 0 chr5 47350702 47350835 -152279315 + (TA)n Simple_repeat Simple_repeat 1 139 0 181 134 21 52 chr5 47350814 47350911 -152279239 + (TTATA)n Simple_repeat Simple_repeat 1 94 0 * 342 153 53 0 chr5 47350915 47351072 -152279078 + (TA)n Simple_repeat Simple_repeat 2 170 -10 191 35 0 35 chr5 47351072 47351101 -152279049 + (TATAA)n Simple_repeat Simple_repeat 3 30 0 342 153 53 0 chr5 47351101 47351113 -152279037 + (TA)n Simple_repeat Simple_repeat 170 180 0 1165 190 146 12 chr5 47351114 47351402 -152278748 - LTR49-int LTR ERV1 -4665 1666 998 541 134 0 36 chr5 47351516 47351628 -152278522 - LTR49-int LTR ERV1 -4941 1390 1283 370 258 0 0 chr5 47351628 47351694 -152278456 - tRNA-Glu-GAG tRNA tRNA 0 75 10 892 147 71 61 chr5 47351697 47351751 -152278399 - LTR49-int LTR ERV1 -5118 1213 1161 7646 66 31 2 chr5 47351751 47352693 -152277457 + LTR5 LTR ERVK 1 969 0 892 147 71 61 chr5 47352693 47352835 -152277315 - LTR49-int LTR ERV1 -5170 1161 1015 * 2039 158 29 35 chr5 47352833 47353577 -152276573 - LTR49-int LTR ERV1 -4466 1480 1 809 156 4 1 chr5 47353579 47353722 -152276428 - LTR49 LTR ERV1 0 595 468 555 143 0 22 chr5 47353721 47353812 -152276338 + LTR49 LTR ERV1 505 593 -2 * 385 174 29 0 chr5 47353837 47353906 -152276244 - L2 LINE L2 -5 3308 3238 579 311 108 42 chr5 47353943 47354322 -152275828 - L2 LINE L2 -667 2647 2244 3416 135 67 23 chr5 47354593 47355208 -152274942 - MER39B LTR ERV1 -2 651 10 223 216 216 11 chr5 47355434 47355522 -152274628 - MIR SINE MIR 0 262 157 2007 195 23 66 chr5 47355540 47356027 -152274123 + MER41B LTR ERV1 134 599 -36 268 297 50 10 chr5 47356092 47356193 -152273957 + MER66-int LTR ERV1 400 504 -6172 2369 107 0 0 chr5 47356251 47356560 -152273590 - AluSg SINE Alu -1 309 1 653 227 30 129 chr5 47356578 47356943 -152273207 + MER66-int LTR ERV1 756 1084 -5592 2282 70 0 3 chr5 47357064 47357375 -152272775 + AluY SINE Alu 1 310 0 903 176 20 0 chr5 47357573 47357726 -152272424 + MER66-int LTR ERV1 1302 1457 -5219 2574 50 0 0 chr5 47359178 47359480 -152270670 + AluY SINE Alu 1 302 -9 2221 112 3 7 chr5 47359896 47360192 -152269958 - AluSx SINE Alu -17 295 1 1413 230 43 16 chr5 47360192 47360644 -152269506 + MER66-int LTR ERV1 2334 2836 -3840 988 176 17 116 chr5 47360700 47361002 -152269148 + MER41B LTR ERV1 340 611 -24 465 268 125 12 chr5 47361011 47361179 -152268971 - MIR SINE MIR -73 189 3 1715 176 7 7 chr5 47361916 47362206 -152267944 - AluSx SINE Alu -22 290 1 308 233 33 147 chr5 47362519 47362669 -152267481 - Tigger8 DNA MER2_type -488 178 46 1807 151 45 59 chr5 47362973 47363331 -152266819 + MLT1A1 LTR MaLR 13 365 0 241 330 75 0 chr5 47363375 47363481 -152266669 - L2 LINE L2 -192 3080 2967 300 326 62 51 chr5 47363634 47363747 -152266403 + MIR SINE MIR 28 145 -117 2074 93 55 14 chr5 47363747 47364037 -152266113 + AluSg SINE Alu 1 302 -8 300 326 62 51 chr5 47364037 47364101 -152266049 + MIR SINE MIR 145 207 -55 3276 256 37 86 chr5 47364910 47365236 -152264914 - L1MD1 LINE L1 0 6242 5902 1799 176 0 0 chr5 47365236 47365520 -152264630 + AluSx SINE Alu 1 284 -28 3276 256 37 86 chr5 47365520 47366009 -152264141 - L1MD1 LINE L1 -340 5902 5391 1969 147 3 23 chr5 47366009 47366316 -152263834 - AluJb SINE Alu -11 301 1 3276 256 37 86 chr5 47366316 47366646 -152263504 - L1MD1 LINE L1 -851 5391 5197 2217 96 4 0 chr5 47366646 47366965 -152263185 - AluSq SINE Alu 0 320 1 3276 256 37 86 chr5 47366965 47367298 -152262852 - L1MD1 LINE L1 -1045 5197 4849 186 302 86 35 chr5 47367298 47367414 -152262736 - MIR SINE MIR -12 250 129 301 277 24 12 chr5 47367479 47367562 -152262588 - L2 LINE L2 -2 3270 3187 241 389 98 16 chr5 47367568 47367761 -152262389 - L2 LINE L2 -224 3048 2840 459 228 16 24 chr5 47367766 47367893 -152262257 - L2 LINE L2 -969 2345 2220 1990 136 16 3 chr5 47367992 47368300 -152261850 + AluSx SINE Alu 1 312 0 3101 113 24 5 chr5 47368516 47368942 -152261208 + MER57B LTR ERV1 1 434 0 1770 184 37 56 chr5 47369256 47369705 -152260445 + MLT1C LTR MaLR 1 467 0 2114 100 17 23 chr5 47369759 47370058 -152260092 - AluSq SINE Alu -16 297 1 35 24 0 0 chr5 47370847 47370889 -152259261 + AT_rich Low_complexity Low_complexity 1 42 0 1066 191 91 0 chr5 47371404 47371603 -152258547 - MER20 DNA MER1_type 0 219 3 212 200 0 0 chr5 47374372 47374412 -152255738 - MIR SINE MIR -75 187 148 1498 181 7 4 chr5 47374424 47374695 -152255455 - AluJo SINE Alu -38 274 3 657 193 73 7 chr5 47374695 47374845 -152255305 - MIR SINE MIR -100 162 3 2988 3 0 0 chr5 47374961 47375278 -152254872 + AluYb8 SINE Alu 1 317 -1 265 247 198 25 chr5 47375735 47375897 -152254253 - MIR3 SINE MIR -3 205 16 1092 104 0 114 chr5 47376702 47376890 -152253260 - AluSc SINE Alu 0 309 144 2534 140 32 16 chr5 47376890 47377333 -152252817 + LTR7 LTR ERV1 1 450 0 1092 104 0 114 chr5 47377333 47377345 -152252805 - AluSc SINE Alu -165 144 132 740 148 98 16 chr5 47377345 47377467 -152252683 - FLAM_C SINE Alu -1 132 1 2229 117 0 0 chr5 47377655 47377955 -152252195 - AluSg SINE Alu -10 300 1 1177 278 120 5 chr5 47379182 47379574 -152250576 + L2 LINE L2 2396 2832 -482 198 0 0 0 chr5 47379644 47379666 -152250484 + (T)n Simple_repeat Simple_repeat 1 22 0 317 203 0 0 chr5 47379670 47379739 -152250411 - LTR30 LTR ERV1 -98 624 556 559 195 22 119 chr5 47379787 47379972 -152250178 - MLT1J LTR MaLR -327 184 18 366 107 0 0 chr5 47380501 47380557 -152249593 + (TCCC)n Simple_repeat Simple_repeat 3 58 0 300 161 103 11 chr5 47380588 47380675 -152249475 - L1MC5 LINE L1 -399 7562 7468 23 0 0 0 chr5 47381338 47381361 -152248789 + AT_rich Low_complexity Low_complexity 1 23 0 255 287 26 26 chr5 47381865 47381980 -152248170 - MER103 DNA DNA -47 119 5 2847 19 0 0 chr5 47382504 47382822 -152247328 + AluYb8 SINE Alu 1 318 0 313 183 0 0 chr5 47384037 47384097 -152246053 - MER116 DNA Mariner -15 65 6 21 0 0 0 chr5 47384148 47384169 -152245981 + AT_rich Low_complexity Low_complexity 1 21 0 390 211 73 18 chr5 47384309 47384418 -152245732 + MER117 DNA MER1_type 53 167 -30 833 311 20 4 chr5 47385819 47386063 -152244087 - MIR SINE MIR -3 259 12 1090 254 24 0 chr5 47386334 47386582 -152243568 + MIR SINE MIR 9 262 0 234 0 0 0 chr5 47386647 47386673 -152243477 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 26 0 0 0 chr5 47387042 47387068 -152243082 + AT_rich Low_complexity Low_complexity 1 26 0 2021 120 75 61 chr5 47387373 47387799 -152242351 - MSTB1 LTR MaLR 0 432 1 2295 82 0 3 chr5 47387876 47388167 -152241983 - AluY SINE Alu -21 290 1 362 318 68 27 chr5 47388645 47388793 -152241357 + L3b LINE CR1 1336 1489 -94 1342 111 44 22 chr5 47388793 47389018 -152241132 - MER30 DNA MER1_type 0 230 1 549 280 161 64 chr5 47389044 47389214 -152240936 - L2 LINE L2 -24 3289 3137 696 159 0 80 chr5 47389214 47389352 -152240798 - FLAM_C SINE Alu -6 127 1 549 280 161 64 chr5 47389352 47389995 -152240155 - L2 LINE L2 -176 3137 2377 791 152 8 15 chr5 47390082 47390214 -152239936 - FLAM_C SINE Alu -2 131 1 341 288 149 39 chr5 47390221 47390436 -152239714 - MIR SINE MIR -13 249 15 222 37 0 0 chr5 47390591 47390618 -152239532 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 395 240 122 48 chr5 47393577 47393748 -152236402 - L1ME4a LINE L1 -236 5885 5685 1782 158 52 9 chr5 47393748 47394077 -152236073 - MER2 DNA MER2_type 0 344 2 395 240 122 48 chr5 47394077 47394176 -152235974 - L1ME4a LINE L1 -436 5685 5595 246 241 224 24 chr5 47394260 47394430 -152235720 - L1ME4a LINE L1 -19 6102 5899 424 207 17 0 chr5 47394430 47394546 -152235604 + (TA)n Simple_repeat Simple_repeat 1 118 0 377 318 62 22 chr5 47394619 47394893 -152235257 - MLT1K LTR MaLR -20 568 284 377 299 7 28 chr5 47394979 47395123 -152235027 - MER5A DNA MER1_type -6 183 43 33 43 0 0 chr5 47395252 47395299 -152234851 + AT_rich Low_complexity Low_complexity 1 47 0 2198 119 0 0 chr5 47396241 47396534 -152233616 - AluSq SINE Alu -20 293 1 5684 93 12 4 chr5 47396666 47397865 -152232285 - L1PB1 LINE L1 -9 6142 4910 304 313 70 8 chr5 47397947 47398075 -152232075 - L1ME4a LINE L1 -4 6117 5982 21 0 0 0 chr5 47399369 47399390 -152230760 + AT_rich Low_complexity Low_complexity 1 21 0 210 143 0 0 chr5 47399617 47399652 -152230498 + (A)n Simple_repeat Simple_repeat 1 35 0 252 297 61 99 chr5 47400933 47401145 -152229005 + L2 LINE L2 2807 3010 -262 235 306 16 0 chr5 47401301 47401363 -152228787 + L2 LINE L2 3208 3270 -2 868 252 117 58 chr5 47402812 47403171 -152226979 - MLT1J1 LTR MaLR -24 422 37 2226 137 2 49 chr5 47403171 47403580 -152226570 - MLT1B LTR MaLR 0 390 1 868 252 117 58 chr5 47403580 47403613 -152226537 - MLT1J1 LTR MaLR -409 37 7 384 293 157 7 chr5 47403676 47403823 -152226327 + MIR SINE MIR 20 188 -74 2285 129 19 11 chr5 47405577 47405949 -152224201 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr5 47406510 47406532 -152223618 + AT_rich Low_complexity Low_complexity 1 22 0 183 146 0 146 chr5 47407268 47407323 -152222827 + L2 LINE L2 3267 3313 0 225 127 16 32 chr5 47408126 47408189 -152221961 + (TA)n Simple_repeat Simple_repeat 2 63 0 207 208 39 13 chr5 47408868 47408945 -152221205 + (TA)n Simple_repeat Simple_repeat 2 80 0 21 36 0 0 chr5 47410232 47410260 -152219890 + AT_rich Low_complexity Low_complexity 1 28 0 1628 163 29 7 chr5 47410260 47410536 -152219614 - AluJo SINE Alu -30 282 1 438 213 41 57 chr5 47410776 47410898 -152219252 + L2 LINE L2 3193 3312 -1 233 132 44 44 chr5 47412445 47412528 -152217622 + (TATATG)n Simple_repeat Simple_repeat 1 83 0 207 170 0 0 chr5 47412879 47412926 -152217224 + (TA)n Simple_repeat Simple_repeat 1 47 0 318 289 0 0 chr5 47412926 47413016 -152217134 - L1MC4 LINE L1 -1339 6703 6614 2502 63 3 0 chr5 47413027 47413330 -152216820 - AluY SINE Alu -7 304 1 1673 149 0 47 chr5 47413616 47413892 -152216258 - AluJb SINE Alu -25 287 25 780 219 71 112 chr5 47415127 47415396 -152214754 - MIR SINE MIR -1 261 4 2206 105 0 3 chr5 47418612 47418906 -152211244 + AluSx SINE Alu 1 293 -19 341 371 52 16 chr5 47419860 47420068 -152210082 + MIR SINE MIR 14 232 -30 2042 141 3 0 chr5 47420991 47421288 -152208862 + AluSx SINE Alu 1 298 -14 4062 186 46 2 chr5 47421293 47422134 -152208016 - MER63C DNA MER1_type -52 878 1 1858 103 128 3 chr5 47422661 47422982 -152207168 + MER46B DNA MER2_type 1 236 0 805 112 26 0 chr5 47423478 47423594 -152206556 + FLAM_C SINE Alu 1 119 -24 29 60 0 0 chr5 47423594 47423644 -152206506 + AT_rich Low_complexity Low_complexity 1 50 0 202 346 59 44 chr5 47424436 47424572 -152205578 - L2 LINE L2 -19 3253 3116 184 373 0 0 chr5 47424839 47424898 -152205252 + L2 LINE L2 3203 3261 -11 2319 100 0 0 chr5 47425174 47425473 -152204677 + AluSx SINE Alu 5 303 -9 1848 239 29 77 chr5 47425708 47426372 -152203778 - L1ME LINE L1 -5433 637 6 2222 109 3 0 chr5 47426766 47427059 -152203091 + AluSg1 SINE Alu 1 294 -15 376 222 183 6 chr5 47427332 47427512 -152202638 - L1ME4a LINE L1 -274 5847 5636 1783 154 146 8 chr5 47427854 47428230 -152201920 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr5 47428252 47428275 -152201875 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr5 47428707 47428738 -152201412 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4827 20 0 4 chr5 47428738 47429300 -152200850 - L1PA2 LINE L1 -11 6144 5585 208 250 0 26 chr5 47429678 47429754 -152200396 + T-rich Low_complexity Low_complexity 1 74 0 752 126 42 0 chr5 47429929 47430048 -152200102 + AluJb SINE Alu 1 124 -188 265 290 37 19 chr5 47430168 47430275 -152199875 - L1ME4a LINE L1 -484 5637 5529 369 211 70 44 chr5 47430578 47430692 -152199458 - MIR SINE MIR -31 231 115 196 264 125 42 chr5 47430698 47430770 -152199380 + L2 LINE L2 3190 3267 -5 223 191 0 0 chr5 47431630 47431672 -152198478 + A-rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr5 47432117 47432140 -152198010 + (TTA)n Simple_repeat Simple_repeat 2 24 0 10086 64 15 28 chr5 47432148 47433527 -152196623 - SVA Other Other -17 1369 8 39114 59 2 8 chr5 47434173 47440351 -152189799 - L1PA5 LINE L1 -4 6150 11 2194 120 0 3 chr5 47440665 47440964 -152189186 + AluSx SINE Alu 1 298 -14 482 302 8 0 chr5 47443038 47443164 -152186986 + MIR3 SINE MIR 3 129 -79 287 297 65 26 chr5 47443390 47443545 -152186605 + MER20B DNA MER1_type 7 167 -616 237 306 211 25 chr5 47443903 47444338 -152185812 - L2 LINE L2 -817 2497 1982 245 106 0 21 chr5 47444338 47444385 -152185765 + (GA)n Simple_repeat Simple_repeat 1 46 0 2241 126 73 45 chr5 47444800 47445222 -152184928 - Tigger2a DNA MER2_type 0 434 1 209 232 14 29 chr5 47445811 47445880 -152184270 + CT-rich Low_complexity Low_complexity 2 69 0 34 0 0 0 chr5 47446809 47446843 -152183307 + AT_rich Low_complexity Low_complexity 1 34 0 2300 99 0 0 chr5 47447925 47448227 -152181923 + AluY SINE Alu 5 306 -5 2223 113 0 10 chr5 47448332 47448642 -152181508 - AluSq SINE Alu -6 307 1 27 29 0 0 chr5 47448944 47448978 -152181172 + AT_rich Low_complexity Low_complexity 1 34 0 2253 119 16 0 chr5 47449148 47449451 -152180699 - AluSx SINE Alu -2 310 3 192 77 0 0 chr5 47449906 47449932 -152180218 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 379 244 196 84 chr5 47453746 47453971 -152176179 - MIR SINE MIR -11 251 2 1532 170 94 3 chr5 47455088 47455418 -152174732 + MLT1D LTR MaLR 1 360 -145 5555 132 31 10 chr5 47455428 47456669 -152173481 - L1PB1 LINE L1 0 6151 4888 2969 126 19 0 chr5 47456669 47457207 -152172943 + L1PBa LINE L1 1761 2308 -4555 782 145 6 66 chr5 47457210 47457376 -152172774 + MLT1D LTR MaLR 350 505 0 396 0 0 0 chr5 47458082 47458126 -152172024 + (TG)n Simple_repeat Simple_repeat 2 45 0 2144 107 0 14 chr5 47458126 47458415 -152171735 - AluSx SINE Alu -27 285 1 626 221 47 70 chr5 47459268 47459333 -152170817 - L1MC4 LINE L1 -763 7279 7214 2351 96 3 0 chr5 47459333 47459635 -152170515 - AluSq SINE Alu -10 303 1 626 221 47 70 chr5 47459635 47459868 -152170282 - L1MC4 LINE L1 -828 7214 6988 5179 164 28 2 chr5 47461073 47461750 -152168400 - L1PB1 LINE L1 -1774 4372 3659 387 0 0 0 chr5 47461750 47461793 -152168357 + (TG)n Simple_repeat Simple_repeat 2 44 0 5179 164 28 2 chr5 47461793 47462107 -152168043 - L1PB1 LINE L1 -2487 3659 3355 262 269 15 0 chr5 47462325 47462392 -152167758 + L3 LINE CR1 864 931 -646 191 221 229 74 chr5 47462727 47462773 -152167377 + L3 LINE CR1 1183 1220 -357 1916 141 78 29 chr5 47462773 47463120 -152167030 - THE1B LTR MaLR 0 364 1 11494 102 11 1 chr5 47463122 47464683 -152165467 - THE1B-int LTR MaLR -2 1578 1 1961 107 42 139 chr5 47464683 47465086 -152165064 - THE1B LTR MaLR 0 364 1 191 221 229 74 chr5 47465086 47465157 -152164993 + L3 LINE CR1 1219 1323 -254 246 128 0 0 chr5 47465201 47465240 -152164910 + (CA)n Simple_repeat Simple_repeat 2 40 0 27 87 0 0 chr5 47465271 47465340 -152164810 + AT_rich Low_complexity Low_complexity 1 69 0 3010 131 111 30 chr5 47465340 47465898 -152164252 + MER6A DNA MER2_type 3 605 0 319 267 11 11 chr5 47465945 47466035 -152164115 - L1MC4 LINE L1 -1339 6703 6614 214 282 188 12 chr5 47466038 47466123 -152164027 + L3 LINE CR1 1398 1497 -80 189 0 0 0 chr5 47466139 47466160 -152163990 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 240 250 0 0 chr5 47466164 47466216 -152163934 - L2 LINE L2 -21 3292 3241 2259 123 0 0 chr5 47466473 47466773 -152163377 - AluSx SINE Alu -12 300 1 4917 139 38 18 chr5 47468225 47469061 -152161089 - L1PA16 LINE L1 -6 6160 5292 198 0 0 0 chr5 47469061 47469083 -152161067 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 4917 139 38 18 chr5 47469083 47469367 -152160783 - L1PA16 LINE L1 -874 5292 5015 315 303 56 63 chr5 47469468 47469610 -152160540 + MIR SINE MIR 3 143 -65 258 81 0 0 chr5 47472889 47472926 -152157224 + (TG)n Simple_repeat Simple_repeat 2 38 0 33 56 0 0 chr5 47473174 47473228 -152156922 + AT_rich Low_complexity Low_complexity 1 54 0 27 87 0 0 chr5 47473500 47473569 -152156581 + AT_rich Low_complexity Low_complexity 1 69 0 4377 38 2 0 chr5 47473731 47474255 -152155895 + L1PA5 LINE L1 5629 6153 -1 750 159 31 0 chr5 47474346 47474509 -152155641 + L1MA8 LINE L1 6097 6264 -27 24 0 0 0 chr5 47474820 47474844 -152155306 + AT_rich Low_complexity Low_complexity 1 24 0 2920 3 0 0 chr5 47475535 47475849 -152154301 + AluYb8 SINE Alu 1 314 -4 269 138 50 0 chr5 47477755 47477835 -152152315 + (TA)n Simple_repeat Simple_repeat 1 84 0 255 152 0 0 chr5 47480684 47480730 -152149420 + CT-rich Low_complexity Low_complexity 3 48 0 681 188 31 23 chr5 47480735 47480863 -152149287 - FLAM_A SINE Alu -3 130 2 1205 241 127 40 chr5 47481443 47482050 -152148100 + MLT2F LTR ERVL 4 663 0 392 215 165 25 chr5 47482687 47482808 -152147342 + MLT1H1 LTR MaLR 418 555 0 1809 124 45 31 chr5 47483305 47483596 -152146554 - AluSx SINE Alu -17 295 1 502 246 80 17 chr5 47483684 47483859 -152146291 + L2 LINE L2 3128 3313 0 508 268 57 6 chr5 47484654 47484811 -152145339 + MER103 DNA DNA 2 166 0 905 103 0 0 chr5 47484956 47485073 -152145077 - Tigger1 DNA MER2_type 0 2418 2302 7937 50 1 4 chr5 47485076 47486837 -152143313 + L1P LINE L1 3 1886 -4260 762 209 106 91 chr5 47586840 47587094 -152043056 - L1M4b LINE L1 -6601 258 1 344 322 35 10 chr5 47587662 47587861 -152042289 + L1ME4a LINE L1 5622 5825 -296 23 68 0 0 chr5 47587877 47587921 -152042229 + AT_rich Low_complexity Low_complexity 1 44 0 276 250 43 35 chr5 47588238 47588354 -152041796 - L2 LINE L2 -1313 2001 1885 1030 250 122 24 chr5 47588663 47589269 -152040881 - L2 LINE L2 0 3313 2658 359 258 146 22 chr5 47589281 47589459 -152040691 + LTR33 LTR ERVL 12 211 -310 398 290 161 0 chr5 47592196 47592351 -152037799 + MIR SINE MIR 76 255 -7 1364 165 86 16 chr5 47592704 47592959 -152037191 + MSTA LTR MaLR 156 428 0 8826 155 9 37 chr5 47592961 47594585 -152035565 + MSTA-int LTR MaLR 3 1580 0 1775 169 158 11 chr5 47594585 47594958 -152035192 + MSTA LTR MaLR 1 428 0 284 282 128 26 chr5 47595061 47595217 -152034933 - MLT1I LTR MaLR -46 363 192 5152 120 13 3 chr5 47595267 47600309 -152029841 - L1PA8 LINE L1 -2 6170 999 190 189 68 68 chr5 47600416 47600490 -152029660 + L3 LINE CR1 430 503 -1074 2239 101 0 0 chr5 47602438 47602744 -152027406 - AluY SINE Alu -5 306 1 5428 121 27 27 chr5 47603527 47604584 -152025566 - L1PA15 LINE L1 -1 6164 5103 1159 127 46 51 chr5 47604584 47604821 -152025329 + THE1C LTR MaLR 140 375 0 9059 159 9 37 chr5 47604821 47606446 -152023704 + THE1C-int LTR MaLR 1 1580 0 1737 142 48 46 chr5 47606453 47606826 -152023324 + THE1C LTR MaLR 2 375 0 10283 198 35 9 chr5 47606826 47608945 -152021205 - L1PA15 LINE L1 -1147 4999 2819 369 0 0 0 chr5 47608945 47608986 -152021164 + (TG)n Simple_repeat Simple_repeat 2 42 0 10283 198 35 9 chr5 47608986 47609089 -152021061 - L1PA15 LINE L1 -3327 2819 2720 262 336 109 25 chr5 47609108 47609227 -152020923 - L2 LINE L2 -33 3239 3111 233 272 12 12 chr5 47609445 47609526 -152020624 - L1M4 LINE L1 -1350 4796 4716 373 352 50 19 chr5 47609710 47610028 -152020122 - L1M4 LINE L1 -1708 4438 4111 188 371 11 11 chr5 47610375 47610464 -152019686 - MIR SINE MIR -71 191 103 1533 144 22 0 chr5 47611112 47611382 -152018768 - L1MA3 LINE L1 0 6305 6030 191 340 195 47 chr5 47611385 47612027 -152018123 - L2 LINE L2 -575 2739 2003 315 260 19 65 chr5 47612029 47612216 -152017934 + L1MC/D LINE L1 3912 4093 -2053 402 265 0 20 chr5 47612296 47612398 -152017752 + MLT2E LTR ERVL 32 131 -497 475 313 60 30 chr5 47613061 47613262 -152016888 - MIR SINE MIR -37 225 19 261 336 0 0 chr5 47613365 47613502 -152016648 + L1MC/D LINE L1 5261 5397 -777 21 0 0 0 chr5 47614092 47614113 -152016037 + AT_rich Low_complexity Low_complexity 1 21 0 238 306 27 9 chr5 47614269 47614380 -152015770 + L1MC/D LINE L1 5692 5804 -2004 472 269 0 0 chr5 47614387 47614495 -152015655 + FAM SINE Alu 5 112 -73 412 313 34 28 chr5 47614629 47614808 -152015342 - Charlie8 DNA MER1_type -2142 275 96 6634 68 9 12 chr5 47615085 47616369 -152013781 + L1PA8 LINE L1 5045 6325 0 243 386 10 10 chr5 47616623 47616724 -152013426 + MIR SINE MIR 16 116 -92 22 0 0 0 chr5 47618106 47618128 -152012022 + AT_rich Low_complexity Low_complexity 1 22 0 671 219 105 64 chr5 47618473 47618816 -152011334 - L1ME2 LINE L1 -10 6154 5798 459 200 32 12 chr5 47618798 47618983 -152011167 - L1ME2 LINE L1 -704 5458 5220 * 277 296 31 19 chr5 47618990 47619149 -152011001 - L1ME2 LINE L1 -968 5178 5018 201 349 80 40 chr5 47619419 47619594 -152010556 - L2 LINE L2 0 3313 3132 1434 214 35 118 chr5 47620396 47620886 -152009264 - MLT1E LTR MaLR -2 591 144 2187 121 0 3 chr5 47620886 47621191 -152008959 + AluSx SINE Alu 2 305 -7 1434 214 35 118 chr5 47621191 47621215 -152008935 - MLT1E LTR MaLR -449 144 120 663 221 29 41 chr5 47621211 47621383 -152008767 - MLT1E LTR MaLR -423 170 1 * 452 284 74 23 chr5 47621785 47621961 -152008189 + MIR SINE MIR 10 194 -68 936 286 94 29 chr5 47622133 47622517 -152007633 - MLT1I LTR MaLR 0 409 1 262 291 178 27 chr5 47624397 47624655 -152005495 + L1MEd LINE L1 1371 1667 -4863 306 328 76 12 chr5 47624913 47625163 -152004987 + L1MEd LINE L1 2309 2574 -3966 180 111 0 0 chr5 47625309 47625336 -152004814 + (TG)n Simple_repeat Simple_repeat 2 28 0 3014 51 0 127 chr5 47625615 47626128 -152004022 + LTR7 LTR ERV1 1 448 -2 4209 236 111 12 chr5 47626204 47626221 -152003929 + L1MC4 LINE L1 6480 6494 -1548 1291 235 96 12 chr5 47626221 47626566 -152003584 + MLT1A2 LTR MaLR 1 374 0 4209 236 111 12 chr5 47626566 47627841 -152002309 + L1MC4 LINE L1 6494 7900 -142 317 291 79 36 chr5 47627856 47628021 -152002129 + L1MEd LINE L1 2556 2727 -3813 593 293 111 35 chr5 47628072 47628388 -152001762 + L1MEd LINE L1 3327 3618 -2922 8656 37 21 2 chr5 47628388 47629439 -152000711 + MER11C LTR ERVK 1 1071 0 593 293 111 35 chr5 47629439 47629458 -152000692 + L1MEd LINE L1 3618 3634 -2906 3170 80 5 16 chr5 47629458 47629907 -152000243 - MLT2A1 LTR ERVL 0 444 1 593 293 111 35 chr5 47629907 47630031 -152000119 + L1MEd LINE L1 3634 3822 -2718 197 299 30 15 chr5 47630340 47630407 -151999743 - L2 LINE L2 -8 3305 3238 192 374 141 0 chr5 47630654 47630753 -151999397 + MIR3 SINE MIR 13 125 -83 235 226 73 110 chr5 47631058 47631222 -151998928 + MER112 DNA MER1_type 4 161 -99 21 0 0 0 chr5 47631849 47631870 -151998280 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr5 47631962 47632005 -151998145 + AT_rich Low_complexity Low_complexity 1 43 0 28 38 0 19 chr5 47632048 47632067 -151998083 + AT_rich Low_complexity Low_complexity 1 19 -33 2636 184 38 12 chr5 47632067 47632567 -151997583 - MLT2B2 LTR ERVL -1 514 2 28 38 0 19 chr5 47632567 47632600 -151997550 + AT_rich Low_complexity Low_complexity 19 52 0 2175 70 0 4 chr5 47632644 47632917 -151997233 + AluY SINE Alu 1 272 -39 367 304 76 99 chr5 47633321 47633989 -151996161 + L2 LINE L2 2323 2975 -339 258 323 0 0 chr5 47634856 47634921 -151995229 + L2 LINE L2 3243 3307 -6 391 174 60 81 chr5 47635240 47635389 -151994761 - L1MD3 LINE L1 0 7995 7850 69 48 0 0 chr5 47635823 47635927 -151994223 + AT_rich Low_complexity Low_complexity 1 104 0 21 36 0 0 chr5 47636093 47636121 -151994029 + AT_rich Low_complexity Low_complexity 1 28 0 235 309 25 12 chr5 47636523 47636604 -151993546 + MIR SINE MIR 65 146 -62 21 36 0 0 chr5 47636809 47636837 -151993313 + AT_rich Low_complexity Low_complexity 1 28 0 253 221 39 0 chr5 47638176 47638279 -151991871 + (TA)n Simple_repeat Simple_repeat 1 107 0 2156 131 0 0 chr5 47638673 47638979 -151991171 - AluSx SINE Alu -5 307 2 224 204 0 0 chr5 47639190 47639239 -151990911 + A-rich Low_complexity Low_complexity 4 52 0 824 331 112 52 chr5 47640143 47640678 -151989472 + MLT1K LTR MaLR 12 578 -10 185 286 95 0 chr5 47640869 47640932 -151989218 - MIR3 SINE MIR -3 205 137 25 0 0 0 chr5 47641283 47641308 -151988842 + AT_rich Low_complexity Low_complexity 1 25 0 628 151 17 0 chr5 47641688 47641807 -151988343 - L1MA9 LINE L1 -1 6311 6191 1969 175 41 3 chr5 47641808 47642174 -151987976 - LTR26 LTR ERV1 0 603 224 463 283 60 72 chr5 47642174 47642425 -151987725 - L1M3b LINE L1 -5677 604 357 * 808 259 22 48 chr5 47642411 47642694 -151987456 - L1M3b LINE L1 -5861 420 1 221 0 35 0 chr5 47643000 47643029 -151987121 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2217 229 78 75 chr5 47643259 47644476 -151985674 + L1MC5 LINE L1 6475 7705 -256 2145 108 0 0 chr5 47644476 47644788 -151985362 + AluSx SINE Alu 7 318 0 2217 229 78 75 chr5 47644788 47644819 -151985331 + L1MC5 LINE L1 7705 7734 -227 943 206 115 41 chr5 47644829 47645194 -151984956 + MSTC LTR MaLR 1 428 0 432 241 53 59 chr5 47645195 47645382 -151984768 + L1MC5 LINE L1 7741 7926 -35 596 299 68 18 chr5 47645456 47645677 -151984473 + MIR SINE MIR 15 246 -16 235 286 116 18 chr5 47645927 47646039 -151984111 - L2 LINE L2 -7 3306 3184 263 333 63 6 chr5 47646687 47646846 -151983304 + MIR SINE MIR 83 250 -12 381 22 0 0 chr5 47648358 47648404 -151981746 + (CA)n Simple_repeat Simple_repeat 2 47 0 2142 120 0 0 chr5 47648520 47648812 -151981338 + AluSx SINE Alu 1 292 -20 653 346 39 15 chr5 47649183 47649726 -151980424 + L1ME LINE L1 5258 5813 -357 229 331 38 54 chr5 47650425 47650609 -151979541 - L2 LINE L2 0 3313 3133 315 289 0 12 chr5 47651380 47651463 -151978687 - MIR SINE MIR -67 141 60 1640 128 16 62 chr5 47651507 47651811 -151978339 - AluSx SINE Alu -22 290 1 1510 161 18 18 chr5 47651886 47652172 -151977978 + THE1C LTR MaLR 90 375 0 275 256 102 43 chr5 47652199 47652331 -151977819 - MIR SINE MIR -67 141 25 708 308 112 33 chr5 47652339 47652644 -151977506 + MER119 DNA MER1_type 5 333 -250 264 200 320 0 chr5 47652645 47652745 -151977405 + MER119 DNA MER1_type 438 569 -14 206 273 76 91 chr5 47653658 47653790 -151976360 + MER5B DNA MER1_type 6 136 -53 375 281 22 0 chr5 47653859 47653948 -151976202 + MER5A DNA MER1_type 22 112 -77 324 0 0 0 chr5 47655107 47655143 -151975007 + (T)n Simple_repeat Simple_repeat 1 36 0 1758 93 0 0 chr5 47655988 47656225 -151973925 - AluY SINE Alu -8 303 67 305 125 47 31 chr5 47656449 47656513 -151973637 + MADE1 DNA Mariner 16 80 0 2039 254 52 26 chr5 47656808 47657309 -151972841 + MLT1F LTR MaLR 29 542 0 24 0 0 0 chr5 47659977 47660001 -151970149 + AT_rich Low_complexity Low_complexity 1 24 0 1400 108 0 0 chr5 47660160 47660364 -151969786 + L1MA2 LINE L1 6101 6304 0 240 247 26 0 chr5 47660367 47660444 -151969706 + A-rich Low_complexity Low_complexity 4 82 0 190 160 40 0 chr5 47661104 47661154 -151968996 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 1566 173 58 7 chr5 47661726 47662073 -151968077 + L1MCa LINE L1 1331 1782 -4644 295 22 22 22 chr5 47663194 47663239 -151966911 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 225 211 18 18 chr5 47663588 47663645 -151966505 + (CATA)n Simple_repeat Simple_repeat 4 60 0 644 282 22 44 chr5 47663986 47664302 -151965848 - L1ME LINE L1 -389 5773 5465 2148 254 52 23 chr5 47664316 47665085 -151965065 + L1M4 LINE L1 3586 4376 -1770 202 213 64 0 chr5 47666116 47666163 -151963987 - L2 LINE L2 -2 3311 3262 316 242 22 44 chr5 47668449 47668540 -151961610 - L2 LINE L2 -32 3281 3193 3031 129 46 12 chr5 47669320 47669817 -151960333 - MER75 DNA T2_type 0 514 1 1326 87 0 0 chr5 47669852 47670035 -151960115 - AluY SINE Alu -5 306 124 2398 74 0 7 chr5 47671387 47671696 -151958454 + AluY SINE Alu 1 307 -4 21 71 0 0 chr5 47671905 47671947 -151958203 + AT_rich Low_complexity Low_complexity 1 42 0 184 429 0 0 chr5 47672573 47672657 -151957493 - L2 LINE L2 -317 2955 2872 261 212 45 0 chr5 47673150 47673216 -151956934 + L1ME3A LINE L1 5364 5432 -730 994 195 29 25 chr5 47673216 47673493 -151956657 + L1MA4 LINE L1 6012 6289 -11 180 0 0 0 chr5 47673775 47673795 -151956355 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 416 257 104 6 chr5 47673816 47673999 -151956151 + L1ME3A LINE L1 5749 5949 -221 1315 116 0 0 chr5 47674199 47674380 -151955770 - AluSc SINE Alu -14 295 115 380 246 97 23 chr5 47674806 47674981 -151955169 - Charlie7 DNA MER1_type -716 1896 1709 1009 247 174 10 chr5 47675003 47675387 -151954763 - Charlie7 DNA MER1_type -2074 538 92 4499 30 0 2 chr5 47675924 47676460 -151953690 - L1PA3 LINE L1 -3 6152 5618 2659 34 0 0 chr5 47676460 47676782 -151953368 + L1P LINE L1 1724 2045 -4101 442 232 32 0 chr5 47677039 47677134 -151953016 + MIR3 SINE MIR 100 197 -11 316 317 71 20 chr5 47677238 47677438 -151952712 - MIR SINE MIR -11 251 17 913 298 163 14 chr5 47678576 47679005 -151951145 - L2 LINE L2 -5 3308 2816 184 183 17 17 chr5 47679323 47679383 -151950767 + CT-rich Low_complexity Low_complexity 3 62 0 1368 189 107 0 chr5 47679401 47679719 -151950431 + L1MD1 LINE L1 5890 6241 -1 229 284 23 0 chr5 47680156 47680244 -151949906 - L1MC/D LINE L1 -2530 5512 5423 328 341 15 0 chr5 47680531 47680648 -151949502 - MER94 DNA DNA 0 134 13 1937 117 31 7 chr5 47680648 47680939 -151949211 - AluSc SINE Alu -11 298 1 328 341 15 0 chr5 47680939 47680953 -151949197 - MER94 DNA DNA -121 13 1 251 298 63 21 chr5 47680986 47681177 -151948973 + L1M4 LINE L1 4919 5117 -1029 367 305 80 13 chr5 47683661 47683812 -151946338 - LTR16A LTR ERVL -21 429 269 184 324 28 28 chr5 47684749 47684857 -151945293 - MIR SINE MIR -6 256 149 210 333 22 22 chr5 47684891 47684981 -151945169 - MIR SINE MIR -100 108 19 1999 116 3 3 chr5 47685244 47685528 -151944622 + AluSg SINE Alu 1 284 -26 587 14 14 0 chr5 47685536 47685608 -151944542 + (TAAAA)n Simple_repeat Simple_repeat 3 75 0 507 190 204 29 chr5 47686214 47686351 -151943799 + MER20 DNA MER1_type 59 219 0 286 299 93 0 chr5 47687042 47687139 -151943011 + MARNA DNA Mariner 468 573 -13 2233 192 28 21 chr5 47687717 47687965 -151942185 - MLT1C LTR MaLR 0 467 213 1574 205 36 25 chr5 47687965 47688326 -151941824 + MLT1A1 LTR MaLR 1 365 0 2233 192 28 21 chr5 47688326 47688504 -151941646 - MLT1C LTR MaLR -254 213 38 692 43 0 11 chr5 47692093 47692186 -151937964 + (TTCC)n Simple_repeat Simple_repeat 4 95 0 1349 187 39 35 chr5 47692207 47692517 -151937633 - AluJo SINE Alu 0 312 2 1995 103 0 4 chr5 47695975 47696278 -151933872 + AluSg SINE Alu 8 309 0 289 299 91 19 chr5 47697830 47697984 -151932166 - L2 LINE L2 -38 3275 3111 32 75 0 0 chr5 47698176 47698243 -151931907 + AT_rich Low_complexity Low_complexity 1 67 0 236 321 29 58 chr5 47698321 47698458 -151931692 - MER5B DNA MER1_type -44 134 2 874 220 16 0 chr5 47698654 47698840 -151931310 + MER5A DNA MER1_type 1 189 0 22 0 0 0 chr5 47699051 47699073 -151931077 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 47699350 47699371 -151930779 + AT_rich Low_complexity Low_complexity 1 21 0 818 265 31 5 chr5 47701279 47701502 -151928648 + MIR SINE MIR 7 235 -27 222 37 0 0 chr5 47702048 47702075 -151928075 + (CA)n Simple_repeat Simple_repeat 2 28 0 293 275 83 25 chr5 47702104 47702224 -151927926 - MIR SINE MIR -75 187 61 23 0 0 0 chr5 47702941 47702964 -151927186 + AT_rich Low_complexity Low_complexity 1 23 0 362 211 95 0 chr5 47703344 47703439 -151926711 + L1MD2 LINE L1 6256 6359 0 22 56 0 0 chr5 47704267 47704303 -151925847 + AT_rich Low_complexity Low_complexity 1 36 0 198 353 85 46 chr5 47704885 47705038 -151925112 - L2 LINE L2 -4 3268 3110 197 305 43 85 chr5 47705112 47705276 -151924874 - L2 LINE L2 -221 3051 2895 1550 157 8 23 chr5 47705792 47706151 -151923999 + MER1B DNA MER1_type 26 339 0 687 267 87 0 chr5 47706255 47706416 -151923734 - MER5A DNA MER1_type 0 189 15 223 297 70 86 chr5 47708758 47708886 -151921264 - MIR3 SINE MIR -1 207 82 16875 106 61 22 chr5 47709656 47710533 -151919617 + Charlie3 DNA MER1_type 1 842 -1864 1493 143 75 23 chr5 47710533 47710798 -151919352 - AluJb SINE Alu 0 312 34 16875 106 61 22 chr5 47710798 47711587 -151918563 + Charlie3 DNA MER1_type 842 1599 -1107 2069 132 0 3 chr5 47711587 47711883 -151918267 - AluSx SINE Alu -17 295 1 16875 106 61 22 chr5 47711883 47712819 -151917331 + Charlie3 DNA MER1_type 1599 2706 0 186 43 0 0 chr5 47713819 47713842 -151916308 + (TCTA)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr5 47714471 47714493 -151915657 + AT_rich Low_complexity Low_complexity 1 22 0 6734 21 24 0 chr5 47714888 47715693 -151914457 + L1PA4 LINE L1 5320 6143 -12 205 157 78 0 chr5 47715863 47715914 -151914236 + A-rich Low_complexity Low_complexity 1 55 0 1527 169 0 37 chr5 47716228 47716501 -151913649 - AluJb SINE Alu -21 291 29 1544 167 0 16 chr5 47718296 47718553 -151911597 + AluJo SINE Alu 1 253 -59 549 165 31 0 chr5 47718559 47718656 -151911494 + L1PB4 LINE L1 5831 5930 -226 891 192 13 0 chr5 47718661 47718817 -151911333 + AluJo SINE Alu 125 282 -30 1989 122 0 30 chr5 47718992 47719295 -151910855 - AluSg SINE Alu -16 294 1 376 307 27 40 chr5 47721995 47722145 -151908005 + MIR3 SINE MIR 58 205 -3 382 159 37 0 chr5 47722466 47722549 -151907601 - MER5A DNA MER1_type -99 90 4 238 223 32 0 chr5 47722649 47722743 -151907407 + GA-rich Low_complexity Low_complexity 3 99 0 26 30 0 0 chr5 47722880 47722913 -151907237 + AT_rich Low_complexity Low_complexity 1 33 0 229 282 27 64 chr5 47723165 47723275 -151906875 - L2 LINE L2 -36 3277 3172 190 281 0 18 chr5 47723383 47723440 -151906710 - MIR SINE MIR -103 159 104 383 21 0 0 chr5 47724314 47724361 -151905789 - L1PA6 LINE L1 -3 6151 6105 346 279 70 31 chr5 47726453 47726582 -151903568 + MIR SINE MIR 88 221 -41 246 275 202 28 chr5 47726996 47727174 -151902976 + L1ME4a LINE L1 3624 3832 -2314 2180 96 3 0 chr5 47727481 47727772 -151902378 + AluY SINE Alu 1 292 -19 312 254 120 62 chr5 47727785 47728159 -151901991 + L1ME4a LINE L1 5708 6103 -18 21 0 0 0 chr5 47729007 47729028 -151901122 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr5 47730648 47730675 -151899475 + (A)n Simple_repeat Simple_repeat 1 27 0 205 238 0 32 chr5 47730684 47730747 -151899403 + GA-rich Low_complexity Low_complexity 2 62 0 22 0 0 0 chr5 47731975 47731997 -151898153 + AT_rich Low_complexity Low_complexity 1 22 0 1698 231 38 21 chr5 47733323 47733800 -151896350 - MER113 DNA MER1_type? -36 485 1 315 0 0 0 chr5 47734390 47734425 -151895725 + (TG)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr5 47734914 47734937 -151895213 + AT_rich Low_complexity Low_complexity 1 23 0 637 308 181 39 chr5 47735269 47736506 -151893644 + L2 LINE L2 1625 3039 -274 547 210 118 75 chr5 47736551 47736737 -151893413 + MER3 DNA MER1_type 16 209 0 227 283 0 0 chr5 47736694 47736747 -151893403 - MER3 DNA MER1_type -119 90 38 * 34 42 0 0 chr5 47736764 47736812 -151893338 + AT_rich Low_complexity Low_complexity 1 48 0 397 294 40 8 chr5 47736824 47736950 -151893200 + L2 LINE L2 3175 3304 -9 207 359 142 27 chr5 47737004 47737299 -151892851 + L2 LINE L2 2588 2916 -398 606 177 43 55 chr5 47738424 47738588 -151891562 + MER53 DNA DNA 2 163 -26 330 224 0 82 chr5 47739252 47739350 -151890800 - L1MC4 LINE L1 -1339 6703 6614 314 219 73 10 chr5 47739272 47739368 -151890782 + L1MC4 LINE L1 6614 6715 -1327 * 260 301 14 14 chr5 47739611 47739684 -151890466 + MIR SINE MIR 13 85 -177 240 86 0 0 chr5 47739858 47739893 -151890257 + (CA)n Simple_repeat Simple_repeat 2 36 0 23 54 0 0 chr5 47739987 47740024 -151890126 + AT_rich Low_complexity Low_complexity 1 37 0 334 258 72 36 chr5 47740092 47740286 -151889864 + L1ME4a LINE L1 5833 6033 -88 299 253 35 0 chr5 47740358 47740445 -151889705 + (TA)n Simple_repeat Simple_repeat 2 91 0 21 36 0 0 chr5 47740513 47740541 -151889609 + AT_rich Low_complexity Low_complexity 1 28 0 192 143 0 0 chr5 47741762 47741804 -151888346 + (CTA)n Simple_repeat Simple_repeat 1 42 0 256 219 85 0 chr5 47742588 47742670 -151887480 + MIR SINE MIR 109 197 -65 244 289 67 29 chr5 47742868 47742972 -151887178 + MIR SINE MIR 117 224 -38 235 203 31 0 chr5 47745276 47745340 -151884810 + (TA)n Simple_repeat Simple_repeat 1 66 0 345 279 29 0 chr5 47747027 47747131 -151883019 - MIR3 SINE MIR -17 191 85 748 210 45 35 chr5 47747309 47747509 -151882641 - MIR SINE MIR -59 203 2 228 318 47 19 chr5 47749390 47749497 -151880653 + MIR SINE MIR 74 183 -79 711 242 56 6 chr5 47749534 47749712 -151880438 - L1PB4 LINE L1 -12 6144 5958 309 263 175 9 chr5 47751922 47752036 -151878114 + MIR SINE MIR 35 167 -95 227 325 38 0 chr5 47752773 47752853 -151877297 + L2 LINE L2 3231 3313 0 711 230 54 0 chr5 47754251 47754399 -151875751 + MER20 DNA MER1_type 63 218 -1 233 298 0 64 chr5 47754485 47754579 -151875571 + MIR SINE MIR 122 209 -53 256 375 70 40 chr5 47754729 47755001 -151875149 + L3b LINE CR1 1289 1568 -15 219 69 0 0 chr5 47755943 47755972 -151874178 + (T)n Simple_repeat Simple_repeat 1 29 0 749 250 121 13 chr5 47757305 47757537 -151872613 + MIR SINE MIR 6 262 0 1648 192 17 7 chr5 47758485 47758787 -151871363 - AluJo SINE Alu -7 305 1 207 304 54 27 chr5 47759845 47759957 -151870193 - MER5A DNA MER1_type -68 121 7 2252 177 52 0 chr5 47760848 47761255 -151868895 + MSTC LTR MaLR 1 428 0 220 320 39 0 chr5 47761586 47761664 -151868486 - MIR SINE MIR -6 256 176 2152 185 21 58 chr5 47761834 47762352 -151867798 - MLT1D LTR MaLR 0 505 7 1346 237 39 48 chr5 47762375 47762792 -151867358 - MLT1D-int LTR MaLR -70 1665 881 3887 207 22 37 chr5 47762864 47763759 -151866391 - MLT1D-int LTR MaLR -484 887 6 1717 219 59 47 chr5 47763763 47764257 -151865893 - MLT1D LTR MaLR 0 505 6 291 319 62 19 chr5 47764336 47764496 -151865654 - MIR3 SINE MIR -36 172 6 275 268 41 10 chr5 47764844 47764941 -151865209 - MIR SINE MIR -85 177 78 260 393 113 32 chr5 47764973 47765380 -151864770 - L2 LINE L2 -26 3246 2807 278 264 35 0 chr5 47765549 47765636 -151864514 + MER94 DNA DNA 42 131 -3 385 269 70 91 chr5 47765899 47766141 -151864009 - MIR SINE MIR 0 262 26 255 31 0 0 chr5 47766312 47766344 -151863806 + (A)n Simple_repeat Simple_repeat 1 32 0 3312 106 21 0 chr5 47767488 47767970 -151862180 - Tigger4(Zombi) DNA MER2_type 0 2731 2240 1223 137 35 5 chr5 47767965 47768162 -151861988 - Tigger4(Zombi) DNA MER2_type -2528 203 1 * 2294 63 3 0 chr5 47768265 47768549 -151861601 - AluY SINE Alu -26 285 1 320 276 69 26 chr5 47769065 47769181 -151860969 + L2 LINE L2 3193 3313 0 209 329 0 0 chr5 47769187 47769260 -151860890 - MIR SINE MIR -61 201 129 21 36 0 0 chr5 47770096 47770124 -151860026 + AT_rich Low_complexity Low_complexity 1 28 0 1215 153 55 51 chr5 47770518 47770754 -151859396 + AluJo SINE Alu 1 237 -75 346 317 122 0 chr5 47774387 47774571 -151855579 + MIR SINE MIR 2 207 -55 248 128 0 21 chr5 47777135 47777182 -151852968 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 225 0 0 0 chr5 47777560 47777585 -151852565 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 227 246 0 18 chr5 47779366 47779423 -151850727 + G-rich Low_complexity Low_complexity 4 59 0 331 224 0 0 chr5 47780595 47780671 -151849479 + MER116 DNA Mariner 5 80 0 261 324 0 0 chr5 47782877 47782951 -151847199 - MIR3 SINE MIR -21 187 114 296 286 48 38 chr5 47784001 47784106 -151846044 - L2 LINE L2 -5 3308 3203 1518 241 82 120 chr5 47784685 47785603 -151844547 - L1MCc LINE L1 -5524 899 17 2311 74 0 3 chr5 47785686 47785983 -151844167 + AluY SINE Alu 1 296 -15 305 336 70 35 chr5 47786252 47786508 -151843642 - HAL1 LINE L1 -870 1637 1373 6558 35 1 0 chr5 47786675 47787937 -151842213 - L1PA3 LINE L1 -116 6039 4777 3927 35 0 2 chr5 47787936 47788425 -151841725 + L1PA3 LINE L1 4267 4754 -1392 * 686 270 78 9 chr5 47788425 47788655 -151841495 - L1MCc LINE L1 -5067 1356 1111 451 297 147 44 chr5 47788909 47789337 -151840813 + LTR33 LTR ERVL 1 472 -49 260 338 27 61 chr5 47790229 47790377 -151839773 - MIR3 SINE MIR -3 205 63 2228 102 57 28 chr5 47790796 47791150 -151839000 + THE1B LTR MaLR 1 364 0 25 75 0 0 chr5 47791422 47791475 -151838675 + AT_rich Low_complexity Low_complexity 1 53 0 360 0 0 0 chr5 47791542 47791582 -151838568 + (CA)n Simple_repeat Simple_repeat 2 41 0 2501 93 31 6 chr5 47793772 47794127 -151836023 + THE1B LTR MaLR 1 364 0 288 386 0 41 chr5 47794923 47795068 -151835082 - MIR3 SINE MIR -3 205 67 1793 212 18 83 chr5 47795707 47795979 -151834171 + MLT2B1 LTR ERVL 1 289 -231 1686 131 106 4 chr5 47795979 47796254 -151833896 + AluSx SINE Alu 1 303 -9 1793 212 18 83 chr5 47796254 47796496 -151833654 + MLT2B1 LTR ERVL 289 479 -41 224 75 0 25 chr5 47796496 47796536 -151833614 + (TA)n Simple_repeat Simple_repeat 2 40 0 1793 212 18 83 chr5 47796536 47796576 -151833574 + MLT2B1 LTR ERVL 479 520 0 300 262 112 9 chr5 47797077 47797184 -151832966 + MLT1L LTR MaLR 150 267 -348 259 232 51 65 chr5 47797362 47797500 -151832650 + L1M4 LINE L1 1518 1755 -4889 381 274 30 30 chr5 47797547 47797682 -151832468 + L1M4 LINE L1 4511 4645 -1999 * 415 154 33 11 chr5 47797674 47797765 -151832385 + L1MC1 LINE L1 2136 2228 -4416 * 4365 229 71 14 chr5 47797759 47797962 -151832188 + L1MC1 LINE L1 2627 2817 -4014 2215 87 6 46 chr5 47797962 47798285 -151831865 + AluSx SINE Alu 1 310 -2 4365 229 71 14 chr5 47798285 47799609 -151830541 + L1MC1 LINE L1 2817 4063 -2768 1883 147 16 10 chr5 47799609 47799915 -151830235 + AluSx SINE Alu 1 308 -4 4365 229 71 14 chr5 47799915 47800191 -151829959 + L1MC1 LINE L1 4063 4322 -2509 204 40 0 0 chr5 47800191 47800216 -151829934 + (CA)n Simple_repeat Simple_repeat 2 26 0 4365 229 71 14 chr5 47800216 47801043 -151829107 + L1MC1 LINE L1 4322 5100 -1731 4365 154 23 24 chr5 47801043 47801583 -151828567 + L1MC1 LINE L1 6008 6548 -283 2254 70 0 3 chr5 47801583 47801867 -151828283 + AluY SINE Alu 20 302 -9 4365 154 23 24 chr5 47801867 47802151 -151827999 + L1MC1 LINE L1 6548 6831 0 4365 229 71 14 chr5 47802151 47802591 -151827559 + L1MC1 LINE L1 5100 6831 0 1524 317 55 16 chr5 47802887 47803656 -151826494 - L2 LINE L2 -152 3161 2363 567 316 48 19 chr5 47803657 47803866 -151826284 - L2 LINE L2 -1726 1588 1374 393 216 24 24 chr5 47803889 47804021 -151826129 + L1MC/D LINE L1 5600 5726 -428 1546 244 11 8 chr5 47805084 47805448 -151824702 + MLT1A1 LTR MaLR 1 365 0 538 286 58 75 chr5 47805598 47805906 -151824244 + LTR16A1 LTR ERVL 152 454 -3 777 289 58 43 chr5 47807724 47808070 -151822080 + MLT1J1 LTR MaLR 65 415 -31 495 334 190 12 chr5 47808708 47809194 -151820956 - L2 LINE L2 -7 3306 2736 874 158 0 0 chr5 47809214 47809347 -151820803 - AluJb SINE Alu -178 134 2 451 335 39 0 chr5 47809363 47809518 -151820632 - L2 LINE L2 -650 2664 2504 697 237 0 13 chr5 47809535 47809687 -151820463 - FAM SINE Alu 0 49 1 1750 289 54 11 chr5 47810003 47810525 -151819625 - MLT1H1 LTR MaLR -11 544 1 1369 207 160 12 chr5 47810541 47810884 -151819266 - MSTD LTR MaLR -2 394 1 2059 181 42 27 chr5 47811283 47811686 -151818464 + MLT2D LTR ERVL 3 422 -42 279 114 0 0 chr5 47811686 47811730 -151818420 + (CA)n Simple_repeat Simple_repeat 2 45 0 2059 181 42 27 chr5 47811730 47811774 -151818376 + MLT2D LTR ERVL 422 464 0 376 260 50 66 chr5 47812015 47812196 -151817954 + MER5B DNA MER1_type 1 178 0 234 0 0 0 chr5 47812904 47812930 -151817220 + (TTG)n Simple_repeat Simple_repeat 2 27 0 28 0 0 0 chr5 47814704 47814732 -151815418 + AT_rich Low_complexity Low_complexity 1 28 0 281 275 148 21 chr5 47815367 47815509 -151814641 - MER5A DNA MER1_type -18 166 1 32 0 0 0 chr5 47815597 47815629 -151814521 + AT_rich Low_complexity Low_complexity 1 32 0 544 248 58 0 chr5 47816632 47816769 -151813381 - MIR SINE MIR -26 236 92 383 178 0 0 chr5 47817579 47817652 -151812498 - MER53 DNA DNA -3 186 114 343 338 38 23 chr5 47817766 47817899 -151812251 - L2 LINE L2 0 3313 3179 21 0 0 0 chr5 47818324 47818345 -151811805 + AT_rich Low_complexity Low_complexity 1 21 0 2188 104 0 0 chr5 47818462 47818751 -151811399 + AluSq SINE Alu 1 289 -24 450 229 47 109 chr5 47819040 47819232 -151810918 + MIR3 SINE MIR 21 200 -8 * 453 300 143 32 chr5 47819198 47819605 -151810545 - L3 LINE CR1 -43 1534 1083 619 262 93 40 chr5 47819649 47819874 -151810276 - MIR SINE MIR -24 238 2 281 340 10 10 chr5 47819889 47819989 -151810161 - L3 LINE CR1 -504 1073 974 26 30 0 0 chr5 47820027 47820060 -151810090 + AT_rich Low_complexity Low_complexity 1 33 0 464 194 10 10 chr5 47821017 47821115 -151809035 + MER5A DNA MER1_type 9 106 -83 1386 175 48 8 chr5 47821311 47821563 -151808587 + AluJb SINE Alu 36 297 -15 401 301 70 52 chr5 47821609 47821838 -151808312 - MIR SINE MIR -7 255 23 187 333 0 0 chr5 47825098 47825152 -151804998 - MIR SINE MIR -72 136 83 414 79 0 0 chr5 47825172 47825235 -151804915 + (TG)n Simple_repeat Simple_repeat 2 64 0 491 349 101 17 chr5 47826087 47826385 -151803765 + MLT1I LTR MaLR 27 349 -60 393 344 43 21 chr5 47827727 47827913 -151802237 + MIR3 SINE MIR 13 202 -6 429 349 155 55 chr5 47828962 47829139 -151801011 - L2 LINE L2 -443 2871 2713 2643 184 11 2 chr5 47829139 47829602 -151800548 - MLT1C LTR MaLR 0 467 1 429 349 155 55 chr5 47829602 47830347 -151799803 - L2 LINE L2 -601 2713 1857 252 184 0 0 chr5 47833223 47833261 -151796889 - MER46C DNA MER2_type -10 328 291 471 113 0 0 chr5 47833262 47833333 -151796817 + (TA)n Simple_repeat Simple_repeat 1 71 0 615 307 40 15 chr5 47833594 47833796 -151796354 - MIR SINE MIR -55 207 1 886 73 28 34 chr5 47834025 47834049 -151796101 + (GAAA)n Simple_repeat Simple_repeat 1 200 0 886 73 28 34 chr5 47834049 47834227 -151795923 + (GAAA)n Simple_repeat Simple_repeat 1 177 0 583 310 147 16 chr5 47835961 47836390 -151793760 - L1M4 LINE L1 -2748 3398 2914 30 27 0 0 chr5 47836394 47836431 -151793719 + AT_rich Low_complexity Low_complexity 1 37 0 434 338 31 18 chr5 47836698 47836923 -151793227 - L1M4 LINE L1 -3609 2537 2310 28 0 0 0 chr5 47837969 47837997 -151792153 + AT_rich Low_complexity Low_complexity 1 28 0 251 286 105 8 chr5 47838160 47838293 -151791857 - HAL1 LINE L1 -742 1765 1620 1757 190 45 3 chr5 47838319 47838651 -151791499 + MER7A DNA MER2_type 2 345 -1 2355 161 26 14 chr5 47838655 47839083 -151791067 - Tigger2a DNA MER2_type -1 433 1 231 261 109 11 chr5 47839272 47839364 -151790786 + L1MEd LINE L1 1111 1211 -4908 1584 153 121 103 chr5 47840163 47840699 -151789451 - LTR49 LTR ERV1 -49 546 1 10094 169 66 100 chr5 47840699 47842757 -151787393 - LTR49-int LTR ERV1 0 6331 4204 2195 113 0 3 chr5 47842757 47843048 -151787102 - AluSx SINE Alu -22 290 1 10094 169 66 100 chr5 47843048 47844269 -151785881 - LTR49-int LTR ERV1 -2127 4204 1706 24 67 0 0 chr5 47845224 47845269 -151784881 + AT_rich Low_complexity Low_complexity 1 45 0 862 208 121 42 chr5 47845300 47845589 -151784561 - LTR49-int LTR ERV1 -5043 1288 977 1635 181 92 87 chr5 47845887 47846430 -151783720 - LTR49 LTR ERV1 -49 546 1 2322 168 15 8 chr5 47846582 47846975 -151783175 - MER61B LTR ERV1 -29 396 1 21045 114 24 11 chr5 47846975 47850172 -151779978 - MER61B-int LTR ERV1 0 5217 1978 1722 109 18 4 chr5 47850157 47850433 -151779717 - MER61B-int LTR ERV1 -3577 1640 1361 * 270 128 0 0 chr5 47850426 47850465 -151779685 - HUERS-P3b LTR ERV1 -3996 3422 3384 * 1910 111 102 50 chr5 47850462 47850824 -151779326 - HUERS-P3b LTR ERV1 -4370 847 467 296 256 44 22 chr5 47851225 47851315 -151778835 - HUERS-P3b LTR ERV1 -5125 92 1 2447 144 10 10 chr5 47851328 47851723 -151778427 - MER61B LTR ERV1 -30 395 1 1368 265 99 14 chr5 47851725 47852147 -151778003 + MER39 LTR ERV1 250 707 0 231 250 56 14 chr5 47852178 47852250 -151777900 + MIR3 SINE MIR 83 157 -51 308 280 27 0 chr5 47852716 47852791 -151777359 + MER91C DNA MER1_type 1 77 -63 2502 169 35 11 chr5 47853006 47853543 -151776607 - L1MA10 LINE L1 -2 6332 5783 358 304 34 83 chr5 47853967 47854233 -151775917 + MIR SINE MIR 9 261 -1 389 275 48 21 chr5 47854550 47854739 -151775411 - L1ME1 LINE L1 -5 6161 5968 704 202 108 9 chr5 47854784 47855007 -151775143 - L1M4 LINE L1 -3699 2945 2701 5367 136 11 0 chr5 47855008 47856111 -151774039 - L1PA15 LINE L1 -1 6815 5700 13039 256 52 13 chr5 47856113 47856796 -151773354 - L1PA15 LINE L1 -1241 5556 4901 1872 148 7 3 chr5 47856796 47857102 -151773048 + AluSx SINE Alu 1 307 0 13039 256 52 13 chr5 47857102 47859963 -151770187 - L1PA15 LINE L1 -1896 4901 2154 2190 85 3 60 chr5 47859963 47860282 -151769868 + AluSp SINE Alu 1 301 -12 13039 256 52 13 chr5 47860282 47860703 -151769447 - L1PA15 LINE L1 -4643 2154 1751 269 26 26 0 chr5 47860703 47860741 -151769409 + (CAG)n Simple_repeat Simple_repeat 1 39 0 13039 256 52 13 chr5 47860741 47861829 -151768321 - L1PA15 LINE L1 -5046 1751 1 358 283 78 51 chr5 47862021 47862494 -151767656 - L1M4 LINE L1 -4135 2690 2205 1159 288 100 30 chr5 47862537 47863535 -151766615 - L1M4 LINE L1 -4715 1931 875 2308 92 0 0 chr5 47863536 47863856 -151766294 - AluY SINE Alu 0 320 1 1827 179 74 12 chr5 47864271 47864689 -151765461 - LTR56 LTR ERV1 0 445 2 7542 197 49 43 chr5 47864817 47865429 -151764721 - LTR56-int LTR ERV1 -265 6146 5539 2200 127 47 8 chr5 47865429 47865790 -151764360 - THE1C LTR MaLR 0 375 1 7542 197 49 43 chr5 47865790 47867499 -151762651 - LTR56-int LTR ERV1 -872 5539 2191 1180 268 12 0 chr5 47867540 47867794 -151762356 - AluJo SINE Alu -55 257 1 6321 199 52 61 chr5 47867802 47868729 -151761421 - LTR49-int LTR ERV1 -2736 3595 2690 1988 137 7 7 chr5 47868729 47869028 -151761122 + AluSx SINE Alu 1 299 -13 6321 199 52 61 chr5 47869028 47869832 -151760318 - LTR49-int LTR ERV1 -3641 2690 1880 1580 145 19 54 chr5 47869829 47870146 -151760004 - LTR49-int LTR ERV1 -4673 1658 1353 * 341 188 40 40 chr5 47870251 47870352 -151759798 - LTR49-int LTR ERV1 -4949 1382 1282 376 242 0 0 chr5 47870354 47870420 -151759730 - tRNA-Glu-GAG tRNA tRNA -3 72 7 301 190 17 0 chr5 47870479 47870537 -151759613 - LTR49-int LTR ERV1 -5150 1181 1123 669 101 0 10 chr5 47870697 47870796 -151759354 + MER4A LTR ERV1 1 98 -566 1701 134 158 78 chr5 47870796 47871170 -151758980 + MER4A LTR ERV1 261 664 0 4000 97 18 5 chr5 47871844 47872402 -151757748 + MER61E LTR ERV1 1 565 -4 2043 132 84 14 chr5 47873037 47873453 -151756697 - LTR56 LTR ERV1 0 445 1 2119 93 7 32 chr5 47873846 47874156 -151755994 + AluSc SINE Alu 1 302 -7 187 354 42 10 chr5 47874180 47874276 -151755874 + MIR SINE MIR 73 171 -91 22 0 0 0 chr5 47875151 47875173 -151754977 + AT_rich Low_complexity Low_complexity 1 22 0 645 99 0 11 chr5 47875487 47875578 -151754572 - MER41C LTR ERV1 -464 90 1 5334 86 51 4 chr5 47875814 47876559 -151753591 + LTR17 LTR ERV1 1 780 0 356 285 32 114 chr5 47876697 47876943 -151753207 - MIR SINE MIR 0 262 37 35 0 0 0 chr5 47877601 47877636 -151752514 + AT_rich Low_complexity Low_complexity 1 35 0 259 366 0 0 chr5 47878014 47878096 -151752054 - L2 LINE L2 -1 3271 3190 294 215 0 51 chr5 47878213 47878292 -151751858 + MIR3 SINE MIR 82 156 -52 29 47 0 0 chr5 47878576 47878619 -151751531 + AT_rich Low_complexity Low_complexity 1 43 0 602 186 97 0 chr5 47878663 47878776 -151751374 + FLAM_C SINE Alu 1 124 -19 200 390 0 0 chr5 47879738 47879815 -151750335 - L3 LINE CR1 -58 1519 1443 386 317 24 16 chr5 47880006 47880129 -151750021 - MIR SINE MIR -73 189 66 316 312 126 22 chr5 47880354 47880585 -151749565 + MIR SINE MIR 8 262 0 194 343 185 0 chr5 47880628 47880774 -151749376 - L3 LINE CR1 -340 1237 1065 279 301 201 30 chr5 47880929 47881258 -151748892 - L3 LINE CR1 -632 945 561 182 234 39 13 chr5 47882422 47882499 -151747651 + L3b LINE CR1 1113 1191 -392 233 267 67 0 chr5 47882507 47882582 -151747568 - MLT1G LTR MaLR -16 574 495 384 296 13 26 chr5 47882751 47882903 -151747247 - MLT1H LTR MaLR -380 169 20 2202 101 3 10 chr5 47883586 47883882 -151746268 - AluY SINE Alu -17 294 1 22 94 0 0 chr5 47884669 47884733 -151745417 + AT_rich Low_complexity Low_complexity 1 64 0 1110 243 241 109 chr5 47884959 47885924 -151744226 + MER52A LTR ERV1 663 1755 0 22 35 0 0 chr5 47885949 47885978 -151744172 + AT_rich Low_complexity Low_complexity 1 29 0 299 280 203 0 chr5 47886035 47886153 -151743997 - MIR SINE MIR -119 143 2 4531 172 51 7 chr5 47886547 47886614 -151743536 - MER6 DNA MER2_type 0 865 802 1337 133 55 0 chr5 47886614 47886832 -151743318 + MER30 DNA MER1_type 1 230 0 4531 172 51 7 chr5 47886832 47887591 -151742559 - MER6 DNA MER2_type -63 802 3 848 168 95 16 chr5 47893683 47893873 -151736277 + MER3 DNA MER1_type 1 205 -4 21 36 0 0 chr5 47895415 47895443 -151734707 + AT_rich Low_complexity Low_complexity 1 28 0 746 269 22 11 chr5 47895636 47895818 -151734332 - MIR SINE MIR -53 209 26 2473 141 91 6 chr5 47896186 47896913 -151733237 + LTR1B LTR ERV1 1 826 0 5318 211 40 65 chr5 47896968 47898255 -151731895 + MLT-int LTR MaLR 481 1735 0 1487 194 22 22 chr5 47898323 47898642 -151731508 - L1 LINE L1 -1812 4334 4016 182 262 24 0 chr5 47899106 47899148 -151731002 + L2 LINE L2 3221 3263 -9 2268 91 0 3 chr5 47900719 47901017 -151729133 + AluSc SINE Alu 1 297 -12 235 282 82 0 chr5 47901046 47901131 -151729019 + MIR SINE MIR 63 154 -108 245 200 120 13 chr5 47901270 47901345 -151728805 - MIR SINE MIR -85 177 95 376 289 63 59 chr5 47902643 47902882 -151727268 - Charlie8 DNA MER1_type -2177 240 1 24 32 0 0 chr5 47903317 47903348 -151726802 + AT_rich Low_complexity Low_complexity 1 31 0 191 232 134 98 chr5 47903385 47903497 -151726653 - MIR SINE MIR -82 180 65 238 356 87 0 chr5 47903814 47903929 -151726221 - MIR3 SINE MIR 0 208 84 24 0 0 0 chr5 47903964 47903988 -151726162 + AT_rich Low_complexity Low_complexity 1 24 0 1651 160 185 14 chr5 47904032 47904394 -151725756 + MSTA LTR MaLR 1 424 -4 247 288 162 9 chr5 47904822 47904933 -151725217 - MIR SINE MIR -77 185 58 277 373 112 12 chr5 47907890 47908059 -151722091 + MER5A DNA MER1_type 2 187 -2 240 295 74 11 chr5 47908154 47908249 -151721901 + L2 LINE L2 3191 3291 -22 425 292 136 40 chr5 47908895 47909196 -151720954 - L1ME4a LINE L1 -150 6389 6060 508 268 211 24 chr5 47909210 47909423 -151720727 - MIR SINE MIR 0 262 10 239 301 85 20 chr5 47910023 47910176 -151719974 - L1ME4a LINE L1 -1909 4655 4493 235 352 83 9 chr5 47910246 47910354 -151719796 - L2 LINE L2 -1 3312 3197 817 268 121 57 chr5 47910458 47910961 -151719189 - L1ME4a LINE L1 -2428 4136 3667 1939 179 0 0 chr5 47910961 47911273 -151718877 - AluJb SINE Alu 0 312 1 817 268 121 57 chr5 47911273 47912025 -151718125 - L1ME4a LINE L1 -2897 3667 2800 351 209 73 18 chr5 47912036 47912146 -151718004 + MER77 LTR ERV1 443 558 -47 434 220 82 82 chr5 47912158 47912317 -151717833 - MLT1D LTR MaLR -258 247 89 962 228 43 48 chr5 47912372 47913632 -151716518 - L1ME4a LINE L1 -5142 903 1 544 283 71 5 chr5 47913679 47913891 -151716259 - L1MEc LINE L1 -3400 3448 3223 * 1079 247 82 16 chr5 47913884 47914337 -151715813 - L1MEc LINE L1 -4160 2869 2387 2051 107 4 0 chr5 47914382 47914662 -151715488 - AluSc SINE Alu -28 281 1 237 250 133 39 chr5 47914664 47914792 -151715358 - L1MEc LINE L1 -4312 2537 2398 1177 150 34 39 chr5 47914932 47915139 -151715011 + AluJb SINE Alu 88 293 -19 566 297 116 7 chr5 47915139 47915563 -151714587 - L1MEc LINE L1 -5101 1747 1278 780 26 0 80 chr5 47915576 47915689 -151714461 - L1PA2 LINE L1 0 6155 6052 811 272 59 95 chr5 47916625 47917354 -151712796 - L1MC4 LINE L1 -3 8039 7236 5931 144 9 29 chr5 47917726 47918242 -151711908 - L1PB1 LINE L1 -5 6146 5621 4125 77 108 46 chr5 47918242 47918890 -151711260 + LTR12 LTR ERV1 1 688 0 5931 144 9 29 chr5 47918890 47919961 -151710189 - L1PB1 LINE L1 -530 5621 4597 288 126 39 48 chr5 47920087 47920190 -151709960 + GA-rich Low_complexity Low_complexity 1 102 0 341 301 28 42 chr5 47920549 47920692 -151709458 - MARNA DNA Mariner -203 383 243 1733 176 0 16 chr5 47921088 47921395 -151708755 - AluJo SINE Alu -10 302 1 296 290 84 38 chr5 47921495 47921626 -151708524 - L2 LINE L2 -5 3308 3172 250 241 11 35 chr5 47921758 47921845 -151708305 - MIR3 SINE MIR -15 193 109 700 297 53 58 chr5 47921982 47922028 -151708122 - LTR16C LTR ERVL -14 477 432 1552 170 50 18 chr5 47922028 47922310 -151707840 - AluJo SINE Alu -21 291 1 700 297 53 58 chr5 47922310 47922643 -151707507 - LTR16C LTR ERVL -59 432 100 199 77 26 26 chr5 47923352 47923391 -151706759 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 207 174 0 145 chr5 47923746 47923815 -151706335 + MIR3 SINE MIR 108 166 -42 26 50 0 0 chr5 47924969 47925009 -151705141 + AT_rich Low_complexity Low_complexity 1 40 0 2258 65 41 3 chr5 47925474 47925768 -151704382 + AluY SINE Alu 1 305 -6 365 282 101 34 chr5 47925791 47925940 -151704210 - MIR3 SINE MIR -41 167 9 192 336 124 9 chr5 47928903 47929016 -151701134 + L2 LINE L2 3107 3232 -40 428 314 92 0 chr5 47929463 47929616 -151700534 + MIR3 SINE MIR 36 202 -6 194 250 44 15 chr5 47929725 47929793 -151700357 - MIR3 SINE MIR -29 179 110 251 322 70 35 chr5 47930134 47930249 -151699901 + L3 LINE CR1 25 143 -1434 301 303 30 10 chr5 47930409 47930508 -151699642 - MIR3 SINE MIR -5 203 103 2541 149 31 2 chr5 47931294 47931710 -151698440 + MSTC LTR MaLR 1 428 0 6235 87 19 8 chr5 47932376 47933491 -151696659 + L1PA10 LINE L1 5067 6167 -1 254 143 20 0 chr5 47934810 47934859 -151695291 + CT-rich Low_complexity Low_complexity 2 51 0 351 0 0 0 chr5 47934860 47934899 -151695251 + (TG)n Simple_repeat Simple_repeat 2 40 0 219 83 0 28 chr5 47934944 47934980 -151695170 + MER5B DNA MER1_type 64 98 -80 2016 108 20 7 chr5 47935122 47935418 -151694732 - AluSq SINE Alu -13 300 1 1779 300 57 63 chr5 47935483 47936469 -151693681 + L2 LINE L2 674 1653 -1661 5076 189 43 27 chr5 47986472 47987786 -151642364 + L1PA13 LINE L1 1239 2585 -4212 180 0 0 0 chr5 47987887 47987907 -151642243 + (A)n Simple_repeat Simple_repeat 1 20 0 21 57 0 0 chr5 47988282 47988317 -151641833 + AT_rich Low_complexity Low_complexity 1 35 0 1355 79 28 28 chr5 47988835 47989051 -151641099 + AluY SINE Alu 1 216 -95 344 303 144 35 chr5 47989525 47989809 -151640341 + L1MC/D LINE L1 5254 5568 -2240 1856 153 14 0 chr5 47989809 47990125 -151640025 - AluSq SINE Alu 0 320 1 5488 132 19 9 chr5 47990150 47991049 -151639101 - L1PA13 LINE L1 -2 6161 5254 935 249 20 0 chr5 47991303 47991504 -151638646 + MER58A DNA MER1_type 2 206 -18 215 392 0 13 chr5 47991603 47991682 -151638468 - MIR SINE MIR -183 79 2 1448 266 62 18 chr5 47993567 47994019 -151636131 + LTR40a LTR ERVL 1 472 -47 180 0 0 0 chr5 47994443 47994463 -151635687 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1142 112 0 6 chr5 47994978 47995039 -151635111 + (GAAA)n Simple_repeat Simple_repeat 1 238 0 1142 112 0 6 chr5 47995039 47995218 -151634932 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 2050 123 0 13 chr5 47995506 47995807 -151634343 + AluSx SINE Alu 5 301 -11 195 162 0 0 chr5 47996141 47996178 -151633972 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 251 269 0 43 chr5 47996418 47996461 -151633689 - MIR SINE MIR -66 196 153 1308 189 35 62 chr5 47996461 47996745 -151633405 - MLT1A1 LTR MaLR -2 363 90 1622 168 42 0 chr5 47996745 47997030 -151633120 - AluJb SINE Alu -15 297 1 1308 189 35 62 chr5 47997030 47997116 -151633034 - MLT1A1 LTR MaLR -275 90 3 251 269 0 43 chr5 47997116 47997165 -151632985 - MIR SINE MIR -109 153 108 21 57 0 0 chr5 47998839 47998874 -151631276 + AT_rich Low_complexity Low_complexity 1 35 0 4548 143 52 13 chr5 47999914 48000709 -151629441 + LTR1B LTR ERV1 1 826 0 355 339 87 10 chr5 48001013 48001208 -151628942 + MIR SINE MIR 11 220 -42 191 336 0 37 chr5 48001289 48001396 -151628754 + L2 LINE L2 1948 2050 -1264 2526 83 0 83 chr5 48001399 48001810 -151628340 - MER51B LTR ERV1 0 377 1 566 317 151 8 chr5 48001813 48002072 -151628078 + L2 LINE L2 2679 2974 -340 877 190 4 106 chr5 48002124 48002350 -151627800 - MER20 DNA MER1_type 0 219 17 222 366 30 38 chr5 48002747 48002878 -151627272 - L2 LINE L2 -7 3265 3136 1379 152 89 28 chr5 48003080 48003602 -151626548 + LTR36 LTR ERV1 2 611 0 201 176 0 0 chr5 48003603 48003637 -151626513 + (TA)n Simple_repeat Simple_repeat 2 35 0 545 252 81 0 chr5 48003941 48004064 -151626086 - MER58A DNA MER1_type 0 133 1 31 0 0 0 chr5 48005704 48005735 -151624415 + AT_rich Low_complexity Low_complexity 1 31 0 926 238 47 49 chr5 48006386 48006793 -151623357 + L1M4 LINE L1 4909 5314 -832 1650 271 61 63 chr5 48006810 48007478 -151622672 + L1MC4 LINE L1 6800 7467 -575 5788 103 40 0 chr5 48007478 48008409 -151621741 - L1PB1 LINE L1 0 6151 5222 1650 271 61 63 chr5 48008409 48008544 -151621606 + L1MC4 LINE L1 7467 7601 -441 619 292 82 34 chr5 48008792 48009674 -151620476 + L1ME LINE L1 548 1483 -4597 2185 221 62 113 chr5 48009686 48010982 -151619168 + L1M4 LINE L1 3477 4706 -1440 333 327 193 0 chr5 48011436 48011586 -151618564 - MER5A DNA MER1_type -1 188 10 866 198 97 0 chr5 48013741 48013968 -151616182 + L1MCa LINE L1 1266 1514 -4912 1536 115 47 24 chr5 48013988 48014241 -151615909 + MER1B DNA MER1_type 80 338 -1 787 314 68 28 chr5 48014243 48014806 -151615344 + L1MCa LINE L1 1697 2281 -4326 311 275 0 0 chr5 48014897 48014966 -151615184 - LTR16B LTR ERVL -395 69 1 208 304 0 0 chr5 48014969 48015025 -151615125 + (TG)n Simple_repeat Simple_repeat 1 56 0 229 278 56 44 chr5 48015096 48015186 -151614964 + L2 LINE L2 3191 3281 -32 652 159 16 8 chr5 48015205 48015331 -151614819 + L1MB8 LINE L1 6051 6177 -1 2011 121 7 0 chr5 48015739 48016019 -151614131 - AluSx SINE Alu -30 282 1 21 36 0 0 chr5 48017688 48017716 -151612434 + AT_rich Low_complexity Low_complexity 1 28 0 300 299 85 37 chr5 48017927 48018307 -151611843 - L2 LINE L2 -1078 2236 1867 317 299 124 34 chr5 48019026 48019203 -151610947 + MIR SINE MIR 14 206 -56 1218 244 76 15 chr5 48020601 48020960 -151609190 - MLT1E2 LTR MaLR 0 626 206 1911 222 22 10 chr5 48020960 48021624 -151608526 + MER49 LTR ERV1 1 923 0 695 262 93 13 chr5 48021658 48021883 -151608267 - MLT1E2 LTR MaLR -401 253 11 25 0 0 0 chr5 48021892 48021917 -151608233 + AT_rich Low_complexity Low_complexity 1 25 0 2064 160 10 0 chr5 48022311 48022623 -151607527 + 7SLRNA srpRNA srpRNA 2 316 -4 536 136 17 17 chr5 48022626 48022744 -151607406 + GA-rich Low_complexity Low_complexity 4 121 0 263 114 68 0 chr5 48022867 48022911 -151607239 - L1P LINE L1 -969 5177 5131 * 3035 181 32 5 chr5 48022908 48023505 -151606645 + L1P LINE L1 4482 5094 -1052 571 316 51 12 chr5 48023520 48023773 -151606377 + L1MC4a LINE L1 5594 5856 -1952 243 188 71 82 chr5 48024281 48024347 -151605803 - MER103 DNA DNA -64 102 36 1964 175 24 19 chr5 48024347 48024719 -151605431 - THE1C LTR MaLR 0 375 2 243 188 71 82 chr5 48024719 48024737 -151605413 - MER103 DNA DNA -130 36 19 1206 256 97 72 chr5 48026645 48027488 -151602662 + L1ME3A LINE L1 5254 6117 -53 28 71 0 0 chr5 48027537 48027593 -151602557 + AT_rich Low_complexity Low_complexity 1 56 0 282 106 0 0 chr5 48028139 48028186 -151601964 + (TC)n Simple_repeat Simple_repeat 1 47 0 23 0 0 0 chr5 48028473 48028496 -151601654 + AT_rich Low_complexity Low_complexity 1 23 0 803 224 113 14 chr5 48029263 48029563 -151600587 - MLT1A2 LTR MaLR 0 374 1 203 179 0 0 chr5 48030191 48030230 -151599920 + A-rich Low_complexity Low_complexity 1 39 0 24 32 0 0 chr5 48030571 48030602 -151599548 + AT_rich Low_complexity Low_complexity 1 31 0 4637 94 5 81 chr5 48030748 48031536 -151598614 - L1PA14 LINE L1 0 6161 5434 23 0 0 0 chr5 48032157 48032180 -151597970 + AT_rich Low_complexity Low_complexity 1 23 0 1175 195 52 57 chr5 48033799 48034168 -151595982 - L1MA9 LINE L1 -44 6268 5902 27 0 0 0 chr5 48036647 48036674 -151593476 + AT_rich Low_complexity Low_complexity 1 27 0 2587 103 11 0 chr5 48036880 48037240 -151592910 + THE1B LTR MaLR 1 364 0 3922 188 53 3 chr5 48037401 48038115 -151592035 + MER21B LTR ERV1 1 750 -113 1464 202 183 16 chr5 48038457 48038888 -151591262 + MLT1D LTR MaLR 1 503 -2 283 264 42 28 chr5 48039508 48039608 -151590542 + MLT1H LTR MaLR 149 324 -271 448 199 178 7 chr5 48039742 48039888 -151590262 + MLT1H LTR MaLR 375 545 -4 247 308 9 19 chr5 48039892 48039999 -151590151 + MLT1H-int LTR MaLR 1 106 -1629 35445 34 2 6 chr5 48040029 48045014 -151585136 + L1PA4 LINE L1 1011 5976 -179 304 266 89 65 chr5 48045384 48045553 -151584597 + MLT1H LTR MaLR 360 532 -17 1875 127 71 0 chr5 48046307 48046590 -151583560 - AluSg1 SINE Alu -4 305 3 535 253 158 6 chr5 48046883 48047041 -151583109 - MER5A DNA MER1_type -1 188 7 22 0 0 0 chr5 48047501 48047523 -151582627 + AT_rich Low_complexity Low_complexity 1 22 0 1917 130 81 26 chr5 48047785 48048130 -151582020 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr5 48048177 48048200 -151581950 + AT_rich Low_complexity Low_complexity 1 23 0 196 153 51 29 chr5 48052184 48052321 -151577829 + (TA)n Simple_repeat Simple_repeat 2 141 0 1934 89 0 4 chr5 48052326 48052573 -151577577 - AluSc SINE Alu -63 246 1 228 289 0 0 chr5 48052660 48052712 -151577438 + (CA)n Simple_repeat Simple_repeat 1 52 0 660 297 136 39 chr5 48052818 48053178 -151576972 + L3 LINE CR1 1021 1415 -162 298 340 28 35 chr5 48053191 48053332 -151576818 - MIR3 SINE MIR -11 197 58 21 36 0 0 chr5 48054196 48054224 -151575926 + AT_rich Low_complexity Low_complexity 1 28 0 6691 130 29 10 chr5 48054578 48055918 -151574232 - L1MA2 LINE L1 0 6304 4932 674 298 32 20 chr5 48056144 48056392 -151573758 - MIR SINE MIR 0 262 12 21 0 0 0 chr5 48056796 48056817 -151573333 + AT_rich Low_complexity Low_complexity 1 21 0 198 191 0 0 chr5 48056853 48056895 -151573255 + (TG)n Simple_repeat Simple_repeat 1 42 0 654 273 97 33 chr5 48057302 48058174 -151571976 + L1ME1 LINE L1 4933 5947 -219 197 289 178 20 chr5 48058482 48058634 -151571516 + L2 LINE L2 2637 2812 -502 2103 102 0 4 chr5 48058906 48059180 -151570970 + AluSq SINE Alu 4 276 -37 229 103 51 64 chr5 48059184 48059262 -151570888 + GA-rich Low_complexity Low_complexity 2 78 0 474 308 174 4 chr5 48059283 48059559 -151570591 - L1ME4a LINE L1 -50 6071 5749 401 125 11 0 chr5 48059563 48059651 -151570499 + (TA)n Simple_repeat Simple_repeat 1 89 0 324 0 0 0 chr5 48060043 48060079 -151570071 + (TG)n Simple_repeat Simple_repeat 2 37 0 396 236 73 45 chr5 48060887 48061065 -151569085 + MER96B DNA MER1_type? 230 412 -5 211 341 153 18 chr5 48061567 48061790 -151568360 + L3 LINE CR1 714 966 -611 1909 250 21 5 chr5 48061840 48062326 -151567824 - MER77 LTR ERV1 0 605 56 201 74 0 0 chr5 48062326 48062353 -151567797 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1909 250 21 5 chr5 48062353 48062410 -151567740 - MER77 LTR ERV1 -549 56 1 385 269 128 20 chr5 48062410 48062555 -151567595 - MLT1L LTR MaLR -120 495 335 322 287 53 47 chr5 48062648 48062798 -151567352 - MLT1L LTR MaLR -464 151 1 458 252 7 56 chr5 48063394 48063469 -151566681 - MIR SINE MIR -126 136 70 4156 122 8 6 chr5 48063469 48064103 -151566047 - MER41B LTR ERV1 0 635 1 458 252 7 56 chr5 48064103 48064170 -151565980 - MIR SINE MIR -192 70 1 2050 133 3 0 chr5 48064266 48064560 -151565590 - AluSq SINE Alu -18 295 1 488 133 48 0 chr5 48064672 48064755 -151565395 - MER34C LTR ERV1 0 585 499 619 141 0 10 chr5 48064755 48064854 -151565296 + MER4A LTR ERV1 1 98 -566 * 924 164 27 25 chr5 48064850 48065078 -151565072 + MER4A LTR ERV1 257 543 -121 3393 138 34 2 chr5 48065080 48065616 -151564534 - MER41C LTR ERV1 -1 553 1 12426 112 29 6 chr5 48065616 48067852 -151562298 - MER41C-int LTR ERV1 0 5946 2856 2013 142 54 37 chr5 48067839 48068421 -151561729 - MER41-int LTR ERV1 -4057 3759 1081 * 599 133 124 9 chr5 48068412 48068525 -151561625 - MER41-int LTR ERV1 -5321 625 500 * 3603 115 0 2 chr5 48068525 48069037 -151561113 + MER9 LTR ERVK 1 511 0 4254 76 5 24 chr5 48069037 48069616 -151560534 + HERVK9 LTR ERVK 1 568 -5348 13516 62 1 1 chr5 48069617 48071292 -151558858 + HERVK9 LTR ERVK 1113 2786 -3130 1806 61 4 0 chr5 48071292 48071522 -151558628 + HERVK9 LTR ERVK 3711 3941 -1975 * 7564 98 3 16 chr5 48071509 48072587 -151557563 + HERVK9 LTR ERVK 4571 5634 -282 2248 126 13 12 chr5 48072612 48072965 -151557185 + HERVK9 LTR ERVK 5635 5916 0 3685 94 4 6 chr5 48072965 48073477 -151556673 + MER9 LTR ERVK 1 511 0 315 118 20 0 chr5 48073477 48073528 -151556622 - MER41-int LTR ERV1 -5441 505 454 865 129 17 17 chr5 48073652 48073830 -151556320 + GA-rich Low_complexity Low_complexity 3 180 0 919 207 6 0 chr5 48075048 48075217 -151554933 + AluJo SINE Alu 113 282 -30 23 0 0 0 chr5 48075217 48075240 -151554910 + AT_rich Low_complexity Low_complexity 1 23 0 360 269 50 42 chr5 48075311 48075430 -151554720 - MIR SINE MIR -123 139 20 396 0 0 0 chr5 48076121 48076165 -151553985 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 947 104 8 0 chr5 48076165 48076290 -151553860 - AluSg SINE Alu -184 126 1 449 265 77 33 chr5 48076796 48076977 -151553173 - LTR67 LTR ERVL -15 542 354 507 345 98 23 chr5 48077572 48078132 -151552018 - ERVL LTR ERVL -2973 2791 2190 279 0 0 0 chr5 48079329 48079360 -151550790 + (TG)n Simple_repeat Simple_repeat 2 32 0 243 204 0 0 chr5 48079690 48079744 -151550406 + (TA)n Simple_repeat Simple_repeat 1 54 0 1432 149 97 45 chr5 48079797 48080085 -151550065 + AluJo SINE Alu 1 303 -9 2090 110 13 20 chr5 48082832 48083131 -151547019 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr5 48083181 48083211 -151546939 + AT_rich Low_complexity Low_complexity 1 30 0 2039 108 49 0 chr5 48085683 48085969 -151544181 + AluSg SINE Alu 1 300 -10 30 0 0 0 chr5 48086016 48086046 -151544104 + AT_rich Low_complexity Low_complexity 1 30 0 4078 188 34 17 chr5 48086214 48086982 -151543168 - LTR39 LTR ERV1 -2 781 1 262 331 57 100 chr5 48087026 48087307 -151542843 - L2 LINE L2 0 3272 3004 22 0 0 0 chr5 48087350 48087372 -151542778 + AT_rich Low_complexity Low_complexity 1 22 0 6586 74 0 0 chr5 48087527 48087557 -151542593 - L1PA8 LINE L1 -3 6169 6140 8312 51 1 0 chr5 48087557 48088522 -151541628 - LTR5 LTR ERVK -3 966 1 6586 74 0 0 chr5 48088522 48089534 -151540616 - L1PA8 LINE L1 -32 6140 5137 2839 109 2 0 chr5 48089534 48089955 -151540195 + L1PA8 LINE L1 4716 5137 -1009 194 208 21 21 chr5 48089996 48090044 -151540106 + MIR SINE MIR 95 142 -120 2206 110 0 10 chr5 48090606 48090907 -151539243 + AluSq SINE Alu 1 298 -15 624 153 0 16 chr5 48091911 48092094 -151538056 + (TA)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr5 48092196 48092224 -151537926 + AT_rich Low_complexity Low_complexity 1 28 0 434 200 21 0 chr5 48092288 48092383 -151537767 - MLT1F LTR MaLR -2 540 444 314 182 56 14 chr5 48092386 48092529 -151537621 + (TA)n Simple_repeat Simple_repeat 1 149 0 780 299 74 0 chr5 48092794 48093038 -151537112 - LTR16C LTR ERVL -5 486 225 316 262 154 5 chr5 48093396 48093617 -151536533 + L1M4 LINE L1 3697 3950 -2196 971 237 19 0 chr5 48093707 48093914 -151536236 - MLT1F1 LTR MaLR -2 565 355 216 67 0 0 chr5 48093970 48094000 -151536150 + (CA)n Simple_repeat Simple_repeat 1 30 0 1452 136 33 16 chr5 48094324 48094567 -151535583 - MER41C-int LTR ERV1 -5698 248 2 3087 143 55 0 chr5 48094653 48095178 -151534972 - MER41C LTR ERV1 0 554 1 799 151 0 16 chr5 48095178 48095304 -151534846 + MER4A LTR ERV1 541 664 0 2019 158 98 60 chr5 48095304 48095785 -151534365 - MER34C LTR ERV1 -83 502 4 2266 210 24 25 chr5 48096120 48096630 -151533520 - LTR22 LTR ERVK 0 509 1 29 47 0 0 chr5 48096796 48096839 -151533311 + AT_rich Low_complexity Low_complexity 1 43 0 2008 197 66 32 chr5 48098375 48098887 -151531263 + MER41B LTR ERV1 108 477 -9 325 274 72 91 chr5 48099246 48099337 -151530813 + L1ME LINE L1 5299 5390 -772 2167 141 0 35 chr5 48099337 48099685 -151530465 + MER1B DNA MER1_type 2 337 0 325 274 72 91 chr5 48099685 48099856 -151530294 + L1ME LINE L1 5390 5556 -606 1955 169 0 3 chr5 48099953 48100249 -151529901 - AluSx SINE Alu -17 295 1 1415 202 16 0 chr5 48101025 48101278 -151528872 + AluJo SINE Alu 5 261 -51 201 74 0 0 chr5 48101342 48101369 -151528781 + (TC)n Simple_repeat Simple_repeat 2 28 0 199 111 22 22 chr5 48101368 48101413 -151528737 + (TA)n Simple_repeat Simple_repeat 2 46 0 * 263 261 134 25 chr5 48103728 48103847 -151526303 + MIR SINE MIR 20 151 -111 261 286 14 0 chr5 48103932 48104002 -151526148 - MIR SINE MIR -53 209 139 472 189 60 58 chr5 48104201 48104475 -151525675 - MER20B DNA MER1_type -5 778 474 1806 189 34 5 chr5 48104550 48104937 -151525213 - L1MD1 LINE L1 0 6242 5845 676 154 56 28 chr5 48104952 48105095 -151525055 - L1MD1 LINE L1 -590 5769 5623 513 285 55 32 chr5 48105099 48105472 -151524678 - L1MD1 LINE L1 -1005 5141 4640 193 242 0 137 chr5 48105486 48105610 -151524540 + MIR SINE MIR 137 243 -19 762 292 72 36 chr5 48106101 48106406 -151523744 + L2 LINE L2 2996 3311 -2 916 305 78 41 chr5 48106742 48106886 -151523264 + L2 LINE L2 2545 2682 -631 1237 241 65 17 chr5 48106886 48107239 -151522911 + MLT1A2 LTR MaLR 1 370 -4 916 305 78 41 chr5 48107239 48107834 -151522316 + L2 LINE L2 2682 3308 -5 322 245 168 42 chr5 48107834 48107977 -151522173 + MIR3 SINE MIR 28 188 -20 195 379 136 0 chr5 48108725 48108828 -151521322 - L2 LINE L2 -10 3262 3146 231 114 0 0 chr5 48109886 48109921 -151520229 + (CCCGAA)n Simple_repeat Simple_repeat 4 38 0 385 344 28 56 chr5 48110654 48110869 -151519281 - MIR SINE MIR -4 258 50 23 0 0 0 chr5 48110943 48110966 -151519184 + AT_rich Low_complexity Low_complexity 1 23 0 953 207 15 10 chr5 48112139 48112337 -151517813 - MER58A DNA MER1_type 0 224 26 669 286 105 70 chr5 48114243 48114768 -151515382 - L2 LINE L2 -1 3312 2764 1889 157 0 3 chr5 48116094 48116393 -151513757 + AluSx SINE Alu 1 298 -14 264 302 93 0 chr5 48116604 48116690 -151513460 + L2 LINE L2 3217 3310 -3 2155 109 10 16 chr5 48116758 48117061 -151513089 - AluSp SINE Alu -12 301 1 607 331 93 22 chr5 48117307 48117663 -151512487 + L2 LINE L2 1844 2224 -1090 1930 205 14 6 chr5 48118105 48118461 -151511689 + MLT1A1 LTR MaLR 7 365 0 576 244 57 52 chr5 48119680 48119873 -151510277 + Charlie8 DNA MER1_type 72 265 -2152 1676 139 68 7 chr5 48120267 48120547 -151509603 - AluSx SINE Alu -15 297 1 1178 233 157 6 chr5 48121627 48121945 -151508205 - MLT1E LTR MaLR 0 593 228 1636 185 101 65 chr5 48122547 48123011 -151507139 + LTR42 LTR ERVL 15 495 0 260 331 72 22 chr5 48124454 48124593 -151505557 + MIR3 SINE MIR 37 182 -26 392 358 86 8 chr5 48124816 48125059 -151505091 - L3 LINE CR1 -2 1575 1314 9648 38 19 1 chr5 48125061 48127029 -151503121 - L1PA4 LINE L1 -3 6152 4166 257 283 98 33 chr5 48127390 48127482 -151502668 - MIR SINE MIR -8 254 157 401 313 56 28 chr5 48128516 48128660 -151501490 - MIR3 SINE MIR -44 164 17 1912 230 44 29 chr5 48129763 48130216 -151499934 - MLT1G LTR MaLR -116 474 15 508 340 118 22 chr5 48131989 48132404 -151497746 + L2 LINE L2 2245 2699 -615 189 0 0 0 chr5 48132583 48132604 -151497546 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 301 254 73 27 chr5 48132735 48132845 -151497305 + L2 LINE L2 3199 3313 0 406 321 36 36 chr5 48133380 48133545 -151496605 - L2 LINE L2 -1 3312 3148 2285 100 3 0 chr5 48134247 48134546 -151495604 + AluSx SINE Alu 3 302 -10 254 332 63 37 chr5 48135984 48136174 -151493976 - L3 LINE CR1 -891 686 492 219 316 38 75 chr5 48136328 48136461 -151493689 - MIR SINE MIR -109 153 26 24 53 0 0 chr5 48136490 48136528 -151493622 + AT_rich Low_complexity Low_complexity 1 38 0 310 279 23 0 chr5 48137443 48137529 -151492621 + MIR SINE MIR 126 213 -49 218 275 14 0 chr5 48137573 48137642 -151492508 - MIR SINE MIR -16 246 177 1908 136 72 31 chr5 48137943 48138303 -151491847 + THE1C LTR MaLR 1 375 0 9531 135 9 40 chr5 48138305 48139934 -151490216 + THE1C-int LTR MaLR 3 1580 0 1516 155 123 26 chr5 48139935 48140277 -151489873 + THE1C LTR MaLR 1 375 0 209 277 0 31 chr5 48141039 48141104 -151489046 + L2 LINE L2 3251 3313 0 219 114 0 0 chr5 48141159 48141194 -151488956 + (TG)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr5 48141444 48141472 -151488678 + AT_rich Low_complexity Low_complexity 1 28 0 293 297 22 0 chr5 48141840 48141931 -151488219 + MIR SINE MIR 109 201 -61 190 245 0 41 chr5 48142179 48142228 -151487922 + L2 LINE L2 3006 3052 -261 304 151 8 67 chr5 48142820 48142939 -151487211 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 227 260 118 41 chr5 48143332 48143501 -151486649 - L1ME LINE L1 -215 5906 5725 222 91 0 0 chr5 48143821 48143854 -151486296 + (TG)n Simple_repeat Simple_repeat 2 34 0 1954 131 0 3 chr5 48144175 48144505 -151485645 + AluSx SINE Alu 1 329 0 2253 110 10 0 chr5 48145108 48145416 -151484734 + AluSx SINE Alu 1 311 -1 240 316 67 67 chr5 48145878 48146087 -151484063 + L2 LINE L2 2138 2346 -968 261 253 91 40 chr5 48146577 48146676 -151483474 - L2 LINE L2 0 3313 3210 221 287 85 0 chr5 48146778 48146872 -151483278 - L2 LINE L2 -340 2932 2831 1452 152 125 27 chr5 48146996 48147293 -151482857 - MER1B DNA MER1_type -1 338 13 22 0 0 0 chr5 48148727 48148749 -151481401 + AT_rich Low_complexity Low_complexity 1 22 0 1997 113 43 0 chr5 48149286 48149568 -151480582 + AluSx SINE Alu 2 295 -17 321 300 67 20 chr5 48151207 48151357 -151478793 - L1ME4a LINE L1 -5 6116 5960 22 0 0 0 chr5 48151552 48151574 -151478576 + AT_rich Low_complexity Low_complexity 1 22 0 287 314 0 0 chr5 48152396 48152482 -151477668 + CT-rich Low_complexity Low_complexity 5 90 0 2448 130 8 3 chr5 48152624 48152986 -151477164 - THE1B LTR MaLR 0 364 1 565 306 121 34 chr5 48154522 48155045 -151475105 - L1MEd LINE L1 -3379 2750 2183 270 263 77 32 chr5 48155102 48155258 -151474892 - L1MEd LINE L1 -4969 1150 988 1223 245 17 3 chr5 48155522 48155824 -151474326 - AluJo SINE Alu -6 306 1 710 62 21 0 chr5 48155857 48155977 -151474173 - AluSc SINE Alu 0 304 183 847 239 5 0 chr5 48156587 48156792 -151473358 - MER3 DNA MER1_type -2 207 2 246 59 0 0 chr5 48156899 48156933 -151473217 - L1P LINE L1 -2809 3337 3304 7376 40 1 0 chr5 48156934 48157854 -151472296 + L1PA4 LINE L1 5234 6154 -1 317 350 8 0 chr5 48157998 48158115 -151472035 + MIR SINE MIR 32 149 -113 2124 115 3 3 chr5 48158214 48158509 -151471641 - AluSp SINE Alu -18 295 1 201 374 13 39 chr5 48159607 48159762 -151470388 + L2 LINE L2 2491 2641 -673 194 323 43 43 chr5 48159767 48159860 -151470290 - L2 LINE L2 -38 3275 3183 281 340 27 53 chr5 48159930 48160118 -151470032 + MER5A DNA MER1_type 7 189 0 4321 167 33 40 chr5 48260557 48261557 -151368593 + L1MC1 LINE L1 5067 6057 -276 1305 156 82 31 chr5 48261558 48261814 -151368336 - MSTA LTR MaLR 0 428 160 2107 122 3 0 chr5 48261922 48262242 -151367908 - Harlequin LTR ERV1 -6575 321 1 3426 101 0 14 chr5 48262242 48262737 -151367413 - LTR2B LTR ERV1 0 490 3 1188 35 7 0 chr5 48262739 48262882 -151367268 + LTR2B LTR ERV1 345 488 -2 292 231 31 0 chr5 48262884 48262949 -151367201 - L1MEc LINE L1 -4389 2007 1941 1475 228 6 21 chr5 48263324 48263657 -151366493 + MLT1E2 LTR MaLR 299 626 0 541 86 95 6 chr5 48263828 48264165 -151365985 + (TA)n Simple_repeat Simple_repeat 1 366 0 1880 155 22 6 chr5 48264206 48264568 -151365582 + L1 LINE L1 3388 3755 -2391 273 172 0 0 chr5 48264577 48264641 -151365509 + (TA)n Simple_repeat Simple_repeat 2 65 0 210 37 0 0 chr5 48264695 48264722 -151365428 + (GA)n Simple_repeat Simple_repeat 2 28 0 534 170 13 0 chr5 48264762 48264867 -151365283 + L1P5 LINE L1 5566 5673 -483 293 50 136 0 chr5 48264867 48265007 -151365143 + (TA)n Simple_repeat Simple_repeat 2 160 0 * 490 94 28 66 chr5 48264983 48265164 -151364986 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 398 234 22 22 chr5 48265165 48265522 -151364628 + (TTATA)n Simple_repeat Simple_repeat 1 357 0 296 195 0 27 chr5 48265522 48265671 -151364479 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 454 175 78 0 chr5 48265673 48265827 -151364323 + (TTATA)n Simple_repeat Simple_repeat 5 170 0 496 102 51 34 chr5 48265833 48266009 -151364141 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 306 93 112 0 chr5 48265995 48266156 -151363994 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 225 0 0 0 chr5 48266157 48266182 -151363968 + (GA)n Simple_repeat Simple_repeat 2 26 0 529 252 52 0 chr5 48266206 48266341 -151363809 + MLT1A1 LTR MaLR 178 319 -46 306 203 16 16 chr5 48266671 48266735 -151363415 - MER5B DNA MER1_type -114 64 1 180 286 22 33 chr5 48266745 48266836 -151363314 + L3 LINE CR1 1134 1223 -354 417 95 83 24 chr5 48266996 48267165 -151362985 + (TA)n Simple_repeat Simple_repeat 2 180 0 204 186 60 60 chr5 48267167 48267334 -151362816 + (TATG)n Simple_repeat Simple_repeat 3 169 0 363 133 75 40 chr5 48267475 48267648 -151362502 + (TA)n Simple_repeat Simple_repeat 1 179 0 430 82 74 21 chr5 48267675 48268068 -151362082 + (TA)n Simple_repeat Simple_repeat 1 413 0 46 0 0 0 chr5 48268068 48268114 -151362036 + AT_rich Low_complexity Low_complexity 1 46 0 356 253 11 39 chr5 48268118 48268300 -151361850 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 282 214 21 0 chr5 48268303 48268443 -151361707 + (TA)n Simple_repeat Simple_repeat 2 144 0 23 0 0 0 chr5 48268448 48268471 -151361679 + AT_rich Low_complexity Low_complexity 1 23 0 231 200 6 29 chr5 48268475 48268650 -151361500 + (TATATG)n Simple_repeat Simple_repeat 2 172 0 34 24 0 0 chr5 48268650 48268691 -151361459 + AT_rich Low_complexity Low_complexity 1 41 0 506 71 77 18 chr5 48268693 48268862 -151361288 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 549 91 50 34 chr5 48268848 48269195 -151360955 + (TTATA)n Simple_repeat Simple_repeat 1 352 0 232 241 54 9 chr5 48269201 48269313 -151360837 + (TA)n Simple_repeat Simple_repeat 1 117 0 2093 120 0 0 chr5 48269313 48269604 -151360546 - AluSg SINE Alu -19 291 1 602 198 30 30 chr5 48269609 48269776 -151360374 - L1P LINE L1 -2812 3334 3168 334 164 0 0 chr5 48269885 48269940 -151360210 - MSTA LTR MaLR -365 63 9 1496 151 40 7 chr5 48269940 48270218 -151359932 + L1MC1 LINE L1 6047 6333 0 269 275 38 12 chr5 48270750 48270830 -151359320 + MIR SINE MIR 75 156 -106 468 35 0 0 chr5 48271300 48271358 -151358792 + (TA)n Simple_repeat Simple_repeat 2 59 0 946 111 10 76 chr5 48271369 48271567 -151358583 - MER50 LTR ERV1 -64 670 486 196 263 53 53 chr5 48272411 48272468 -151357682 + MER5A DNA MER1_type 47 103 -86 259 280 175 35 chr5 48272992 48273135 -151357015 - L3 LINE CR1 -254 1323 1161 250 280 127 0 chr5 48273130 48273248 -151356902 - L2 LINE L2 -1 3312 3180 * 348 298 61 0 chr5 48273306 48273420 -151356730 - L3 LINE CR1 -550 1027 907 1761 128 0 15 chr5 48274986 48275251 -151354899 - AluSx SINE Alu -37 275 15 251 275 44 11 chr5 48275590 48275681 -151354469 - MLT1K LTR MaLR -7 581 488 2632 160 164 39 chr5 48275875 48277029 -151353121 + LTR12 LTR ERV1 18 714 0 796 280 100 38 chr5 48277157 48277496 -151352654 - MLT1H LTR MaLR 0 549 190 419 272 55 55 chr5 48278190 48278392 -151351758 - MIR3 SINE MIR -5 203 2 5602 40 1 0 chr5 48278768 48279449 -151350701 - L1PA5 LINE L1 -13 6141 5460 537 158 0 0 chr5 48279962 48280057 -151350093 + L1MB4 LINE L1 5995 6089 -91 1622 195 30 43 chr5 48280173 48280543 -151349607 - MLT1A1 LTR MaLR 0 365 1 234 149 0 0 chr5 48280711 48280758 -151349392 + L1MB3 LINE L1 6128 6174 -9 874 301 94 46 chr5 48281673 48282555 -151347595 + L2 LINE L2 2379 3313 0 221 329 99 31 chr5 48282681 48282842 -151347308 + L2 LINE L2 3142 3313 0 181 262 0 66 chr5 48283078 48283139 -151347011 + MIR3 SINE MIR 112 168 -40 299 354 23 8 chr5 48283202 48283332 -151346818 - MIR SINE MIR -124 138 7 1859 106 6 90 chr5 48283546 48283867 -151346283 + AluSx SINE Alu 1 294 -18 224 284 62 12 chr5 48284965 48285046 -151345104 + MIR SINE MIR 63 147 -115 23 0 0 0 chr5 48285345 48285368 -151344782 + AT_rich Low_complexity Low_complexity 1 23 0 1597 184 3 10 chr5 48286312 48286611 -151343539 - AluJo SINE Alu -15 297 1 6869 236 46 56 chr5 48287078 48287629 -151342521 - L1MCa LINE L1 -1193 5233 4678 297 68 0 0 chr5 48287629 48287673 -151342477 + (TA)n Simple_repeat Simple_repeat 1 44 0 6869 236 46 56 chr5 48287673 48287926 -151342224 - L1MCa LINE L1 -1748 4678 4424 1965 118 6 44 chr5 48287926 48288241 -151341909 - AluSc SINE Alu -6 303 1 6869 236 46 56 chr5 48288241 48290034 -151340116 - L1MCa LINE L1 -2002 4424 2849 189 0 0 0 chr5 48290034 48290055 -151340095 + (ATG)n Simple_repeat Simple_repeat 3 23 0 6869 236 46 56 chr5 48290055 48290585 -151339565 - L1MCa LINE L1 -3577 2849 2315 822 214 217 114 chr5 48290604 48290964 -151339186 - MER57B LTR ERV1 -6 397 1 1567 310 86 39 chr5 48290964 48291836 -151338314 - MER57-int LTR ERV1 -393 7144 6232 995 250 44 114 chr5 48292297 48292709 -151337441 - MER57-int LTR ERV1 -1330 6207 5825 3054 225 59 93 chr5 48293032 48294849 -151335301 - MER57-int LTR ERV1 -1498 3438 2202 1261 236 41 36 chr5 48294982 48295422 -151334728 - MER57-int LTR ERV1 -2968 1968 1527 1101 183 114 44 chr5 48295461 48295898 -151334252 - MER57-int LTR ERV1 -336 3001 1069 640 298 143 8 chr5 48296273 48296525 -151333625 - MER57-int LTR ERV1 -7249 288 3 3591 65 13 0 chr5 48296538 48296996 -151333154 - MER57-int LTR ERV1 -3081 3815 3352 2758 72 2 2 chr5 48296995 48297395 -151332755 - MER57-int LTR ERV1 -4322 2574 2175 * 1050 43 0 7 chr5 48297383 48297523 -151332627 - MER57-int LTR ERV1 -5186 1710 1572 * 3742 83 25 9 chr5 48297522 48298049 -151332101 - MER57-int LTR ERV1 -6042 854 320 893 214 15 0 chr5 48298149 48298355 -151331795 - L1P LINE L1 -2990 3156 2948 22 0 0 0 chr5 48298886 48298908 -151331242 + AT_rich Low_complexity Low_complexity 1 22 0 588 342 102 7 chr5 48299920 48300215 -151329935 - L2 LINE L2 -427 2887 2565 926 273 101 21 chr5 48300216 48300593 -151329557 + L1ME1 LINE L1 5756 6162 -4 834 307 77 22 chr5 48300610 48300972 -151329178 - L2 LINE L2 -789 2525 2144 294 29 0 0 chr5 48303243 48303278 -151326872 + (CA)n Simple_repeat Simple_repeat 2 36 0 2827 184 14 12 chr5 48303670 48304252 -151325898 + L1PB4 LINE L1 5572 6154 -2 355 310 148 19 chr5 48304552 48304707 -151325443 + MER5A DNA MER1_type 8 182 -7 378 352 104 14 chr5 48305015 48305379 -151324771 - L2 LINE L2 -931 2383 1987 494 353 36 30 chr5 48305394 48305509 -151324641 - LTR16C LTR ERVL 0 491 378 2726 85 3 0 chr5 48305509 48305863 -151324287 - THE1A LTR MaLR 0 355 1 494 353 36 30 chr5 48305863 48306050 -151324100 - LTR16C LTR ERVL -113 378 187 460 97 39 10 chr5 48306273 48306376 -151323774 + (TA)n Simple_repeat Simple_repeat 2 107 0 311 337 80 11 chr5 48306438 48306625 -151323525 - L2 LINE L2 -1427 1887 1688 * 1007 243 22 2 chr5 48306622 48306852 -151323298 + MIR SINE MIR 6 235 -27 223 347 78 52 chr5 48306912 48307180 -151322970 - L2 LINE L2 -1758 1556 1282 345 24 0 0 chr5 48307257 48307299 -151322851 + (CA)n Simple_repeat Simple_repeat 2 43 0 24 32 0 0 chr5 48307636 48307667 -151322483 + AT_rich Low_complexity Low_complexity 1 31 0 1338 124 36 0 chr5 48307858 48308052 -151322098 + AluSx SINE Alu 28 228 -84 314 146 0 0 chr5 48308052 48308100 -151322050 + AluSq/x SINE Alu 85 132 -170 1507 156 49 35 chr5 48308102 48308415 -151321735 + AluSq SINE Alu 1 317 0 28 29 0 0 chr5 48309131 48309166 -151320984 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr5 48309326 48309373 -151320777 + AT_rich Low_complexity Low_complexity 1 47 0 27 0 0 0 chr5 48309474 48309501 -151320649 + AT_rich Low_complexity Low_complexity 1 27 0 30 0 0 0 chr5 48310008 48310038 -151320112 + AT_rich Low_complexity Low_complexity 1 30 0 1970 150 110 69 chr5 48310286 48310805 -151319345 - LTR49 LTR ERV1 -55 540 1 281 310 69 46 chr5 48310805 48311066 -151319084 - L2 LINE L2 -586 2728 2462 2108 151 42 31 chr5 48311273 48311698 -151318452 - MSTB1 LTR MaLR -2 430 1 459 287 139 5 chr5 48312142 48312344 -151317806 + HAL1 LINE L1 1575 1803 -704 291 188 38 38 chr5 48312510 48312590 -151317560 + HAL1 LINE L1 2073 2152 -355 36 77 0 0 chr5 48313052 48313130 -151317020 + AT_rich Low_complexity Low_complexity 1 78 0 249 241 0 103 chr5 48313834 48313921 -151316229 + L2 LINE L2 2309 2386 -928 205 200 40 0 chr5 48313938 48313988 -151316162 + L2 LINE L2 3219 3270 -2 * 719 233 41 0 chr5 48313981 48314127 -151316023 - MER5A DNA MER1_type -37 152 1 205 394 24 0 chr5 48314240 48314367 -151315783 - MIR3 SINE MIR -1 207 78 183 306 20 0 chr5 48314919 48314968 -151315182 + MIR SINE MIR 28 77 -131 312 271 164 71 chr5 48315185 48315325 -151314825 - MER5A DNA MER1_type -3 186 34 43429 44 1 2 chr5 48316908 48323061 -151307089 - L1PA3 LINE L1 -3 6152 9 2180 145 3 3 chr5 48323211 48323549 -151306601 + THE1C LTR MaLR 33 370 -5 10152 119 27 7 chr5 48323554 48325102 -151305048 + THE1C-int LTR MaLR 1 1580 0 2488 122 3 11 chr5 48325102 48325480 -151304670 + THE1C LTR MaLR 1 375 0 35 0 0 0 chr5 48325562 48325597 -151304553 + AT_rich Low_complexity Low_complexity 1 35 0 313 400 75 17 chr5 48325878 48326358 -151303792 + L2 LINE L2 2446 2953 -361 1757 144 16 42 chr5 48326901 48327213 -151302937 + AluSx SINE Alu 1 304 -8 3919 168 35 102 chr5 48327218 48327679 -151302471 - HSMAR2 DNA Mariner -1 1301 811 808 201 14 0 chr5 48327679 48327823 -151302327 - AluJb SINE Alu -21 291 146 3919 168 35 102 chr5 48327823 48328333 -151301817 - HSMAR2 DNA Mariner -491 811 262 375 222 0 0 chr5 48328462 48328534 -151301616 + HSMAR2 DNA Mariner 261 332 -970 * 1381 163 21 0 chr5 48328528 48328768 -151301382 - HSMAR2 DNA Mariner -1053 249 5 2086 127 0 7 chr5 48329222 48329521 -151300629 + AluSq SINE Alu 1 297 -16 280 344 31 31 chr5 48329724 48329948 -151300202 + L2 LINE L2 2611 2834 -480 266 331 161 0 chr5 48330156 48330286 -151299864 + L2 LINE L2 3158 3308 -5 358 242 11 33 chr5 48330801 48330892 -151299258 + L2 LINE L2 3224 3312 -1 339 325 89 41 chr5 48331582 48331853 -151298297 + L2 LINE L2 2984 3267 -46 1929 162 11 58 chr5 48332426 48332808 -151297342 + MLT1A1 LTR MaLR 1 364 -1 722 259 42 5 chr5 48333543 48333732 -151296418 + MIR SINE MIR 53 248 -14 187 294 0 0 chr5 48334764 48334815 -151295335 - MIR SINE MIR -3 259 209 987 151 6 0 chr5 48335499 48335658 -151294492 + L1M1 LINE L1 5430 5589 -716 5685 132 5 3 chr5 48335658 48336864 -151293286 + L1MA2 LINE L1 4855 6064 -240 2425 95 26 31 chr5 48336864 48337254 -151292896 + L1MA2 LINE L1 5911 6298 -6 246 219 0 0 chr5 48337587 48337651 -151292499 + (ATG)n Simple_repeat Simple_repeat 2 65 0 22 35 0 0 chr5 48338620 48338649 -151291501 + AT_rich Low_complexity Low_complexity 1 29 0 227 100 0 25 chr5 48338980 48339020 -151291130 + (TA)n Simple_repeat Simple_repeat 2 40 0 848 236 51 4 chr5 48339200 48339454 -151290696 + L1MD3 LINE L1 7730 7995 0 195 308 110 22 chr5 48339501 48339592 -151290558 + MIR SINE MIR 106 204 -58 993 179 85 12 chr5 48340081 48340327 -151289823 + L1MB4 LINE L1 5902 6165 -15 2786 156 91 98 chr5 48340647 48341384 -151288766 + MER44D DNA MER2_type 2 605 0 1854 138 62 49 chr5 48341459 48341844 -151288306 - MLT1B LTR MaLR 0 390 1 23 33 0 0 chr5 48342427 48342457 -151287693 + AT_rich Low_complexity Low_complexity 1 30 0 516 89 0 0 chr5 48343208 48343287 -151286863 - L1MA1 LINE L1 -4 6298 6220 25 31 0 0 chr5 48343478 48343510 -151286640 + AT_rich Low_complexity Low_complexity 1 32 0 22 94 0 0 chr5 48344549 48344613 -151285537 + AT_rich Low_complexity Low_complexity 1 64 0 2503 25 16 0 chr5 48344869 48345288 -151284862 - L1PA4 LINE L1 -591 5564 5141 4756 42 8 0 chr5 48345288 48345877 -151284273 + L1PA4 LINE L1 5560 6154 -1 1174 197 67 10 chr5 48346026 48346325 -151283825 - Charlie5 DNA MER1_type 0 2619 2304 432 289 9 0 chr5 48346433 48346547 -151283603 - MER3 DNA MER1_type -41 168 54 361 257 50 29 chr5 48346594 48346683 -151283467 + MIR SINE MIR 71 166 -96 1897 166 37 3 chr5 48346683 48347032 -151283118 + MER46B DNA MER2_type 1 236 0 361 257 50 29 chr5 48347032 48347082 -151283068 + MIR SINE MIR 166 213 -49 255 254 69 90 chr5 48348045 48348234 -151281916 + MIR SINE MIR 65 249 -13 543 259 15 0 chr5 48348929 48349060 -151281090 + MIR SINE MIR 130 262 0 362 250 19 9 chr5 48349811 48349919 -151280231 + L1ME3 LINE L1 5175 5283 -863 1485 254 77 79 chr5 48349922 48350741 -151279409 + L1ME3 LINE L1 5316 6132 -30 205 191 0 0 chr5 48350852 48350894 -151279256 + T-rich Low_complexity Low_complexity 1 42 0 41036 63 3 9 chr5 48350902 48357093 -151273057 - L1PA5 LINE L1 -1 6153 1 22 35 0 0 chr5 48357200 48357229 -151272921 + AT_rich Low_complexity Low_complexity 1 29 0 6193 100 25 5 chr5 48358290 48359440 -151270710 - L1PA12 LINE L1 -1 6167 5003 7900 149 10 3 chr5 48359440 48360780 -151269370 + L1P LINE L1 3484 4832 -1314 3939 197 24 35 chr5 48361089 48361126 -151269024 - L1MC3 LINE L1 -8 7777 7741 1945 186 59 5 chr5 48361126 48361534 -151268616 - MSTB1 LTR MaLR -2 430 1 3939 197 24 35 chr5 48361534 48362428 -151267722 - L1MC3 LINE L1 -44 7741 6857 915 159 0 0 chr5 48363583 48363815 -151266335 + CT-rich Low_complexity Low_complexity 1 232 0 2168 114 0 7 chr5 48364778 48365075 -151265075 - AluSg1 SINE Alu -11 298 4 226 357 14 0 chr5 48365377 48365447 -151264703 - L2 LINE L2 -1 3271 3201 389 311 23 0 chr5 48366305 48366437 -151263713 - MLT1J LTR MaLR -308 203 69 2617 91 9 0 chr5 48366459 48366809 -151263341 - THE1A LTR MaLR 0 355 3 39 0 0 0 chr5 48366817 48366856 -151263294 + AT_rich Low_complexity Low_complexity 1 39 0 235 245 21 53 chr5 48366875 48366969 -151263181 - L1ME LINE L1 -474 5647 5557 1381 159 132 29 chr5 48367007 48367347 -151262803 - THE1C LTR MaLR 0 375 1 1619 173 10 22 chr5 48367724 48368037 -151262113 - AluJb SINE Alu -3 309 1 226 213 0 38 chr5 48368052 48368132 -151262018 + T-rich Low_complexity Low_complexity 5 81 0 2049 160 18 41 chr5 48368740 48369134 -151261016 - Tigger2 DNA MER2_type 0 2718 2334 256 234 0 0 chr5 48369129 48369176 -151260974 - Tigger2 DNA MER2_type -2655 63 17 * 225 293 14 85 chr5 48369563 48369775 -151260375 - L1 LINE L1 -2419 3727 3531 339 316 0 38 chr5 48369861 48370019 -151260131 + MER5B DNA MER1_type 1 152 -26 21 0 0 0 chr5 48370019 48370040 -151260110 + AT_rich Low_complexity Low_complexity 1 21 0 3009 178 136 92 chr5 48370118 48370668 -151259482 - L1MC3 LINE L1 -14 7771 7247 256 232 24 37 chr5 48370668 48370750 -151259400 - MLT1F1 LTR MaLR -442 125 45 3009 178 136 92 chr5 48370750 48371124 -151259026 - L1MC3 LINE L1 -538 7247 6721 1478 184 11 28 chr5 48371124 48371406 -151258744 - MSTC LTR MaLR -151 277 1 2619 278 65 30 chr5 48371406 48372013 -151258137 - L1M4 LINE L1 -2054 4092 3507 3519 117 2 4 chr5 48372013 48372525 -151257625 + MER9 LTR ERVK 1 511 0 2619 278 65 30 chr5 48372525 48373296 -151256854 - L1M4 LINE L1 -2639 3507 2667 299 297 0 11 chr5 48374055 48374146 -151256004 - L2 LINE L2 -36 3277 3188 251 283 101 7 chr5 48374258 48374396 -151255754 - L2 LINE L2 -3144 170 20 382 331 6 45 chr5 48374453 48374610 -151255540 - MIR SINE MIR -92 170 20 23 33 0 0 chr5 48374879 48374909 -151255241 + AT_rich Low_complexity Low_complexity 1 30 0 330 26 0 0 chr5 48375955 48375994 -151254156 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 588 202 0 0 chr5 48376022 48376121 -151254029 - AluJb SINE Alu -81 231 133 2006 127 0 0 chr5 48376121 48376420 -151253730 + L1P4 LINE L1 5400 5698 -465 22 80 0 0 chr5 48376487 48376537 -151253613 + AT_rich Low_complexity Low_complexity 1 50 0 761 227 0 48 chr5 48377020 48377227 -151252923 + MER3 DNA MER1_type 7 203 -6 531 346 166 19 chr5 48377397 48377646 -151252504 - L2 LINE L2 -5 3308 3097 1393 214 54 3 chr5 48377646 48377941 -151252209 + AluJb SINE Alu 3 312 0 531 346 166 19 chr5 48377941 48378124 -151252026 - L2 LINE L2 -216 3097 2812 397 312 138 5 chr5 48378199 48378388 -151251762 - L2 LINE L2 -2324 990 777 832 128 15 8 chr5 48379031 48379163 -151250987 + MLT1A1 LTR MaLR 7 139 -226 884 130 0 14 chr5 48379163 48379301 -151250849 - THE1B LTR MaLR 0 364 229 1579 124 30 0 chr5 48379405 48379639 -151250511 - THE1B LTR MaLR -123 241 1 712 241 62 31 chr5 48379639 48379863 -151250287 + MLT1A1 LTR MaLR 135 365 0 230 318 0 0 chr5 48381072 48381138 -151249012 + MIR3 SINE MIR 116 181 -27 499 278 13 13 chr5 48381513 48381664 -151248486 + MIR SINE MIR 80 230 -32 204 191 43 21 chr5 48382057 48382104 -151248046 - MIR SINE MIR -21 241 194 314 78 0 20 chr5 48382466 48382517 -151247633 + (CA)n Simple_repeat Simple_repeat 2 51 0 6036 110 8 0 chr5 48385291 48386393 -151243757 - L1PA14 LINE L1 -2 6159 5047 183 304 58 29 chr5 48386855 48386924 -151243226 + L2 LINE L2 3201 3271 -1 200 278 0 0 chr5 48386972 48387026 -151243124 - L2 LINE L2 -494 2820 2767 2123 92 10 23 chr5 48387702 48388007 -151242143 + AluSc SINE Alu 1 301 -8 2045 146 122 10 chr5 48388171 48388556 -151241594 - MSTA LTR MaLR 0 428 1 759 176 0 15 chr5 48389115 48389251 -151240899 + MER20 DNA MER1_type 85 218 -1 573 258 72 30 chr5 48389910 48390174 -151239976 + L1MC5 LINE L1 7611 7885 -76 505 243 79 28 chr5 48390772 48390949 -151239201 - MER58C DNA MER1_type -1 214 29 290 257 239 0 chr5 48393360 48393469 -151236681 + MER5A DNA MER1_type 55 189 0 1780 136 4 4 chr5 48394527 48394792 -151235358 - AluSx SINE Alu -9 303 39 195 341 56 50 chr5 48395016 48395195 -151234955 + L3 LINE CR1 1164 1343 -234 213 215 152 63 chr5 48398077 48398156 -151231994 - L2 LINE L2 0 3272 3187 408 20 0 0 chr5 48398385 48398434 -151231716 + (TG)n Simple_repeat Simple_repeat 2 50 0 29 47 0 0 chr5 48398994 48399037 -151231113 + AT_rich Low_complexity Low_complexity 1 43 0 293 306 56 66 chr5 48399476 48399672 -151230478 + MLT1L LTR MaLR 201 394 -221 231 180 16 16 chr5 48400397 48400458 -151229692 + A-rich Low_complexity Low_complexity 3 63 0 1104 214 51 20 chr5 48400475 48400769 -151229381 - L1MB8 LINE L1 -7 6171 5869 203 241 0 0 chr5 48400988 48401042 -151229108 + (CA)n Simple_repeat Simple_repeat 2 55 0 195 344 62 0 chr5 48401112 48401176 -151228974 + L2 LINE L2 3018 3085 -187 2485 71 0 7 chr5 48402619 48402929 -151227221 - AluSc SINE Alu -1 308 1 2155 130 0 0 chr5 48403412 48403712 -151226438 + AluSx SINE Alu 5 304 -8 21 0 0 0 chr5 48404195 48404216 -151225934 + AT_rich Low_complexity Low_complexity 1 21 0 205 270 54 54 chr5 48404366 48404477 -151225673 + L2 LINE L2 2950 3060 -212 2201 112 0 3 chr5 48405212 48405508 -151224642 - AluSg SINE Alu -15 295 1 328 326 22 92 chr5 48406288 48406324 -151223826 - MER5B DNA MER1_type -7 171 134 2270 78 0 17 chr5 48406324 48406660 -151223490 + AluY SINE Alu 1 311 0 328 326 22 92 chr5 48406660 48406807 -151223343 - MER5B DNA MER1_type -44 134 1 267 281 230 15 chr5 48406841 48406976 -151223174 - MER5A DNA MER1_type 0 189 26 277 342 51 61 chr5 48407024 48407220 -151222930 + MIR SINE MIR 59 252 -10 227 242 0 0 chr5 48408012 48408074 -151222076 + (CAG)n Simple_repeat Simple_repeat 3 64 0 21 57 0 0 chr5 48408638 48408673 -151221477 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr5 48409669 48409711 -151220439 + AT_rich Low_complexity Low_complexity 1 42 0 26 0 0 0 chr5 48410661 48410687 -151219463 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr5 48411116 48411150 -151219000 + AT_rich Low_complexity Low_complexity 1 34 0 757 176 0 0 chr5 48413542 48413673 -151216477 + FLAM_C SINE Alu 1 131 -12 944 179 0 19 chr5 48413732 48413894 -151216256 + AluJb SINE Alu 146 304 -8 2102 122 0 7 chr5 48414025 48414328 -151215822 - AluSx SINE Alu -11 301 1 328 269 0 43 chr5 48414884 48414977 -151215173 + MER5A DNA MER1_type 12 100 -89 1797 132 66 120 chr5 48415608 48416180 -151213970 - LTR12 LTR ERV1 -219 2219 53 270 211 0 0 chr5 48416180 48416232 -151213918 - LTR30 LTR ERV1 -670 52 1 375 302 0 17 chr5 48416247 48416363 -151213787 + MIR SINE MIR 129 242 -20 213 132 0 0 chr5 48416979 48417017 -151213133 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 56 0 0 chr5 48418376 48418412 -151211738 + AT_rich Low_complexity Low_complexity 1 36 0 190 348 29 0 chr5 48418437 48418506 -151211644 + MIR3 SINE MIR 123 193 -15 196 286 143 0 chr5 48418567 48418644 -151211506 + L2 LINE L2 3175 3262 -10 232 49 73 0 chr5 48419563 48419604 -151210546 + T-rich Low_complexity Low_complexity 3 46 0 2224 76 11 0 chr5 48419869 48420194 -151209956 - AluY SINE Alu 0 328 1 339 179 0 0 chr5 48420235 48420291 -151209859 + L2 LINE L2 3217 3272 0 2232 123 6 14 chr5 48420386 48420751 -151209399 + L1MA2 LINE L1 5943 6304 0 1394 195 21 7 chr5 48421131 48421413 -151208737 - AluSx SINE Alu -16 286 1 325 258 8 8 chr5 48421812 48421944 -151208206 + (TA)n Simple_repeat Simple_repeat 2 133 0 219 367 70 55 chr5 48422192 48422391 -151207759 - L2 LINE L2 -342 2972 2771 5785 262 39 31 chr5 48422395 48424870 -151205280 + L1PA15 LINE L1 1 2854 -3943 1976 137 7 0 chr5 48424870 48425147 -151205003 + AluSg SINE Alu 1 279 -31 5785 262 39 31 chr5 48425147 48426411 -151203739 + L1PA15 LINE L1 2854 4106 -2691 42792 50 3 3 chr5 48426413 48432610 -151197540 + L1PA4 LINE L1 1 6199 0 8176 196 17 18 chr5 48432611 48433097 -151197053 + L1PA15 LINE L1 4097 4582 -2234 2205 99 3 0 chr5 48433097 48433390 -151196760 + AluSg SINE Alu 1 294 -16 8176 196 17 18 chr5 48433390 48434020 -151196130 + L1PA15 LINE L1 4582 5211 -1605 2068 123 7 0 chr5 48434020 48434313 -151195837 + AluSp SINE Alu 1 295 -18 8176 196 17 18 chr5 48434313 48435919 -151194231 + L1PA15 LINE L1 5211 6813 -3 2663 88 3 0 chr5 48436039 48436393 -151193757 + THE1A LTR MaLR 1 355 0 10879 105 15 14 chr5 48436394 48437971 -151192179 + THE1A-int LTR MaLR 2 1580 0 2468 100 12 0 chr5 48437971 48438311 -151191839 + THE1A LTR MaLR 1 344 -11 453 262 0 0 chr5 48438318 48438425 -151191725 + MER94 DNA DNA 8 114 -20 772 248 8 65 chr5 48439643 48439889 -151190261 + MIR SINE MIR 2 233 -29 375 322 90 6 chr5 48439916 48440093 -151190057 + L2 LINE L2 2219 2410 -904 1886 191 19 8 chr5 48440113 48440474 -151189676 - MLT1A1 LTR MaLR 0 365 1 646 271 113 17 chr5 48644623 48644914 -150985236 - L2 LINE L2 -542 2772 2454 574 185 75 48 chr5 48645019 48645110 -150985040 + MLT1B LTR MaLR 1 99 -291 2118 126 83 6 chr5 48645110 48645458 -150984692 - THE1C LTR MaLR 0 375 1 574 185 75 48 chr5 48645458 48645512 -150984638 + MLT1B LTR MaLR 99 150 -240 262 141 141 65 chr5 48645590 48645682 -150984468 + MLT1B LTR MaLR 274 372 -2 575 27 14 0 chr5 48646486 48646559 -150983591 + (CA)n Simple_repeat Simple_repeat 2 75 0 195 204 0 0 chr5 48650927 48650971 -150979179 + (TG)n Simple_repeat Simple_repeat 1 44 0 357 43 0 0 chr5 48651043 48651090 -150979060 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 872 19 9 0 chr5 48651983 48652089 -150978061 + (TTTCC)n Simple_repeat Simple_repeat 5 111 0 464 250 12 70 chr5 48652296 48652468 -150977682 - MLT1F LTR MaLR 0 542 381 277 242 30 30 chr5 48652479 48652545 -150977605 + tRNA-Ala-GCG tRNA tRNA 3 68 -7 234 252 2 2 chr5 48653470 48653546 -150976604 - L1 LINE L1 -1626 4520 4445 225 211 26 26 chr5 48655969 48656045 -150974105 + A-rich Low_complexity Low_complexity 3 78 0 2154 233 16 2 chr5 48657420 48657978 -150972172 + L1 LINE L1 3885 4450 -1696 328 264 38 75 chr5 48659653 48659759 -150970391 + MLT1E1 LTR MaLR 3 104 -550 316 243 56 37 chr5 48660183 48660290 -150969860 + MLT1E1 LTR MaLR 382 490 -164 199 222 14 14 chr5 48660490 48660562 -150969588 + CT-rich Low_complexity Low_complexity 4 75 0 869 290 104 21 chr5 48661016 48661459 -150968691 - MLT1E LTR MaLR -72 521 39 188 255 0 0 chr5 48663683 48663734 -150966416 - MIR SINE MIR -102 106 56 189 121 0 0 chr5 48666909 48666942 -150963208 + (A)n Simple_repeat Simple_repeat 1 33 0 231 285 104 35 chr5 48667098 48667242 -150962908 - MER3 DNA MER1_type -55 154 1 407 266 111 29 chr5 48668440 48668647 -150961503 - MIR SINE MIR -2 260 37 263 320 47 0 chr5 48668701 48668829 -150961321 - MIR SINE MIR -70 192 59 398 125 167 10 chr5 48669276 48669372 -150960778 + L1 LINE L1 3584 3694 -2452 24 32 0 0 chr5 48672351 48672382 -150957768 + AT_rich Low_complexity Low_complexity 1 31 0 2637 106 5 11 chr5 48675593 48675970 -150954180 - THE1C LTR MaLR 0 375 1 277 346 85 8 chr5 48676441 48676571 -150953579 + MIR3 SINE MIR 58 197 -11 455 283 60 76 chr5 48677119 48677434 -150952716 + MER46C DNA MER2_type 8 317 -21 2423 88 0 0 chr5 48677960 48678267 -150951883 - AluY SINE Alu -4 307 1 1940 101 74 20 chr5 48678369 48678665 -150951485 + AluSx SINE Alu 1 312 0 19867 56 2 2 chr5 48679644 48682164 -150947986 - L1P LINE L1 -2285 3861 1340 1445 184 58 19 chr5 48682171 48682481 -150947669 - L1P LINE L1 -5740 406 85 8470 49 3 1 chr5 48682583 48684416 -150945734 + L1PA5 LINE L1 4321 6154 0 7698 35 0 0 chr5 48684832 48686183 -150943967 + L1PA3 LINE L1 4862 6212 0 1900 110 51 20 chr5 48686263 48686555 -150943595 + AluSc SINE Alu 3 303 -6 24 0 0 0 chr5 48686971 48686995 -150943155 + AT_rich Low_complexity Low_complexity 1 24 0 4042 35 8 12 chr5 48687015 48687508 -150942642 - L1PA4 LINE L1 -3 6152 5662 1205 345 76 18 chr5 48687514 48688643 -150941507 - L2 LINE L2 -1156 2158 964 204 275 55 46 chr5 48688708 48688817 -150941333 + MIR3 SINE MIR 86 195 -13 3174 163 30 0 chr5 48688926 48689465 -150940685 - Tigger1 DNA MER2_type -1863 555 1 217 346 40 0 chr5 48689833 48689934 -150940216 + MIR3 SINE MIR 63 167 -41 760 223 69 6 chr5 48690028 48690203 -150939947 + MER5A DNA MER1_type 1 186 -3 248 232 18 0 chr5 48690496 48690552 -150939598 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 255 324 29 41 chr5 48691605 48691784 -150938366 - MIR SINE MIR -63 145 16 250 78 0 78 chr5 48691854 48691905 -150938245 - Alu SINE Alu 0 301 255 14028 37 7 4 chr5 48692007 48694850 -150935300 - L1PA4 LINE L1 -305 5850 2999 674 185 25 49 chr5 48695441 48695603 -150934547 - L1PB4 LINE L1 -1 6155 5998 2813 268 67 51 chr5 48695753 48697479 -150932671 - L1PA15-16 LINE L1 -4469 2380 743 317 271 75 0 chr5 48698175 48698282 -150931868 - MIR SINE MIR 0 262 148 442 227 116 12 chr5 48698300 48698472 -150931678 - L1MB3 LINE L1 -7 6176 5987 199 277 31 31 chr5 48698481 48698546 -150931604 - MIR SINE MIR -67 141 77 419 38 0 0 chr5 48700877 48700930 -150929220 + MADE1 DNA Mariner 1 53 -27 1651 184 67 12 chr5 48701195 48701597 -150928553 - L1 LINE L1 -1312 4834 4411 2503 56 15 0 chr5 48701697 48702036 -150928114 + L1PA4 LINE L1 5812 6155 0 26 0 0 0 chr5 48702808 48702834 -150927316 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr5 48702871 48702892 -150927258 + AT_rich Low_complexity Low_complexity 1 21 0 702 192 187 5 chr5 48704735 48704933 -150925217 - MER31B LTR ERV1 -8 458 225 543 232 48 77 chr5 48704969 48705176 -150924974 - L1ME2 LINE L1 -3 6161 5961 4754 147 13 12 chr5 48705177 48706192 -150923958 - L1MA8 LINE L1 -229 6062 5045 1127 127 6 0 chr5 48706192 48706357 -150923793 - MER4A LTR ERV1 0 664 499 187 313 62 0 chr5 48707030 48707110 -150923040 + MIR SINE MIR 151 235 -27 2310 84 0 31 chr5 48707305 48707625 -150922525 - AluY SINE Alu -1 310 1 239 299 81 0 chr5 48708590 48708677 -150921473 + L2 LINE L2 2943 3036 -277 314 198 77 44 chr5 48708715 48708806 -150921344 + L2 LINE L2 3155 3248 -65 399 328 75 0 chr5 48709670 48709856 -150920294 - MIR SINE MIR -2 260 61 2916 224 34 31 chr5 48709856 48710285 -150919865 + L1MA7 LINE L1 3826 4259 -1887 210 37 0 0 chr5 48710285 48710312 -150919838 + (CATG)n Simple_repeat Simple_repeat 4 30 0 2916 224 34 31 chr5 48710312 48710711 -150919439 + L1MA7 LINE L1 4259 4656 -1490 295 183 28 28 chr5 48710715 48710786 -150919364 + L1PA15-16 LINE L1 276 346 -6503 4701 152 26 23 chr5 48710795 48711652 -150918498 - L1PA16 LINE L1 0 6166 5308 992 236 25 63 chr5 48711634 48711918 -150918232 + L1PA15-16 LINE L1 415 687 -6162 * 2376 161 60 60 chr5 48712279 48712895 -150917255 - L1MA7 LINE L1 -1312 4834 4219 4380 170 59 30 chr5 48712901 48714122 -150916028 + L1MA7 LINE L1 4848 6117 -174 2354 53 0 27 chr5 48714122 48714422 -150915728 + AluY SINE Alu 1 292 -19 4380 170 59 30 chr5 48714422 48714601 -150915549 + L1MA7 LINE L1 6117 6289 -2 380 292 44 0 chr5 48714631 48714744 -150915406 - MIR SINE MIR -108 154 37 233 294 185 0 chr5 48714960 48715052 -150915098 + MIR SINE MIR 36 144 -64 1776 174 37 42 chr5 48715896 48716326 -150913824 - MSTA LTR MaLR 0 428 1 35 0 0 0 chr5 48716503 48716538 -150913612 + AT_rich Low_complexity Low_complexity 1 35 0 1014 148 92 0 chr5 48716644 48716840 -150913310 - L1PA13 LINE L1 -2 6161 5948 5806 158 43 29 chr5 48716840 48718736 -150911414 - L1PA13 LINE L1 -25 6138 4219 1988 143 3 0 chr5 48718736 48719022 -150911128 + AluSx SINE Alu 3 289 -23 5806 158 43 29 chr5 48719022 48719096 -150911054 - L1PA13 LINE L1 -1944 4219 4148 3385 164 13 11 chr5 48719120 48720200 -150909950 - L1PA13 LINE L1 -411 5754 4675 1183 197 37 21 chr5 48720304 48720629 -150909521 - L1 LINE L1 -772 5374 5045 1272 113 11 0 chr5 48720629 48720814 -150909336 - MER4B LTR ERV1 0 610 424 263 95 0 0 chr5 48720818 48720860 -150909290 - MADE1 DNA Mariner -4 76 35 273 111 22 0 chr5 48720947 48720992 -150909158 - MADE1 DNA Mariner -34 46 1 2200 120 99 18 chr5 48720992 48721385 -150908765 - MER4B LTR ERV1 -185 425 1 1863 165 36 43 chr5 48721386 48721779 -150908371 - L1 LINE L1 -1099 5047 4658 549 288 62 10 chr5 48721818 48722043 -150908107 - MLT1H LTR MaLR -3 546 278 4101 124 8 11 chr5 48722051 48722255 -150907895 - MER41B LTR ERV1 -8 627 424 2198 133 30 25 chr5 48722255 48722617 -150907533 - THE1B LTR MaLR 0 364 1 4101 124 8 11 chr5 48722617 48723041 -150907109 - MER41B LTR ERV1 -211 424 1 543 313 108 8 chr5 48723041 48723286 -150906864 - MLT1H LTR MaLR -267 282 11 338 222 0 50 chr5 48723287 48723386 -150906764 - L1ME2 LINE L1 -234 5930 5837 1461 222 47 52 chr5 48723388 48723524 -150906626 - MLT1C LTR MaLR -43 424 289 4241 139 34 21 chr5 48723524 48724280 -150905870 + MER4E LTR ERV1 1 766 0 1461 222 47 52 chr5 48724280 48724567 -150905583 - MLT1C LTR MaLR -178 289 3 1267 221 47 36 chr5 48724571 48724796 -150905354 - L1ME2 LINE L1 -441 5723 5491 2079 109 10 7 chr5 48724796 48725100 -150905050 + AluSq SINE Alu 1 305 -8 1267 221 47 36 chr5 48725100 48725258 -150904892 - L1ME2 LINE L1 -673 5491 5336 2019 187 38 115 chr5 48725355 48725885 -150904265 - MLT1D LTR MaLR -16 489 1 789 233 147 20 chr5 48725887 48726132 -150904018 + LTR50 LTR ERVL 3 278 -517 360 239 188 24 chr5 48726253 48726466 -150903684 + LTR50 LTR ERVL 528 775 -20 315 0 0 0 chr5 48726910 48726945 -150903205 + (CA)n Simple_repeat Simple_repeat 1 35 0 35 54 0 0 chr5 48728781 48728837 -150901313 + AT_rich Low_complexity Low_complexity 1 56 0 1875 152 17 0 chr5 48729998 48730287 -150899863 - AluSx SINE Alu -16 296 3 901 87 0 0 chr5 48731729 48731844 -150898306 + AluSq/x SINE Alu 1 115 -198 502 231 88 28 chr5 48732071 48732253 -150897897 + L1MC5 LINE L1 7721 7913 -48 22 56 5 0 chr5 48732484 48732568 -150897582 + AT_rich Low_complexity Low_complexity 1 50 0 2192 229 43 24 chr5 48733621 48734175 -150895975 + MER90 LTR ERV1 1 565 -10 2855 157 14 0 chr5 48734267 48734759 -150895391 - L1MB3 LINE L1 0 6183 5685 220 221 211 29 chr5 48735210 48735314 -150894836 + L2 LINE L2 3191 3313 0 208 279 82 74 chr5 48735331 48735453 -150894697 - L2 LINE L2 -25 3288 3166 24 32 0 0 chr5 48736053 48736084 -150894066 + AT_rich Low_complexity Low_complexity 1 31 0 2121 70 0 4 chr5 48736683 48736942 -150893208 + AluY SINE Alu 1 258 -53 286 338 26 52 chr5 48737024 48737098 -150893052 - MIR3 SINE MIR -5 203 129 2690 173 2 11 chr5 48737098 48737566 -150892584 + MLT2C2 LTR ERVL 1 464 0 286 338 26 52 chr5 48737566 48737645 -150892505 - MIR3 SINE MIR -79 129 54 272 276 89 47 chr5 48738094 48738253 -150891897 - MIR SINE MIR -59 203 35 349 278 8 53 chr5 48741482 48741615 -150888535 - MIR SINE MIR -41 221 95 412 269 119 25 chr5 48743903 48744063 -150886087 + MER5A DNA MER1_type 9 183 -6 249 83 0 0 chr5 48744828 48744864 -150885286 + (CA)n Simple_repeat Simple_repeat 1 36 0 318 87 0 0 chr5 48746060 48746106 -150884044 + (CA)n Simple_repeat Simple_repeat 1 46 0 976 344 33 9 chr5 48747162 48747583 -150882567 + L2 LINE L2 971 1401 -1913 197 108 27 0 chr5 48747663 48747700 -150882450 + (CA)n Simple_repeat Simple_repeat 1 38 0 1237 301 96 18 chr5 48747720 48748348 -150881802 + L2 LINE L2 1354 2030 -1284 2374 138 16 23 chr5 48748354 48748790 -150881360 - L1MB1 LINE L1 0 6168 5736 659 306 59 24 chr5 48748905 48749193 -150880957 + LTR16A1 LTR ERVL 160 457 0 246 316 143 0 chr5 48750013 48750111 -150880039 - L2 LINE L2 -15 3298 3187 257 336 25 34 chr5 48750549 48750668 -150879482 - MER5A DNA MER1_type -25 164 47 1057 173 15 5 chr5 48750683 48750885 -150879265 + MER3 DNA MER1_type 1 204 -5 196 265 44 15 chr5 48751131 48751199 -150878951 + L2 LINE L2 3202 3271 -1 414 222 63 167 chr5 48751440 48751511 -150878639 + MIR SINE MIR 40 117 -145 2082 131 3 13 chr5 48751511 48751824 -150878326 - AluSq SINE Alu -3 310 1 414 222 63 167 chr5 48751824 48751841 -150878309 + MIR SINE MIR 117 134 -128 2400 96 0 0 chr5 48751841 48752144 -150878006 - AluSx SINE Alu -9 303 1 414 222 63 167 chr5 48752144 48752275 -150877875 + MIR SINE MIR 134 237 -25 252 195 0 65 chr5 48753068 48753145 -150877005 + LTR67 LTR ERVL 458 529 -28 789 251 45 45 chr5 48753403 48753464 -150876686 - MER58A DNA MER1_type -2197 223 163 1772 176 31 8 chr5 48753464 48753817 -150876333 + MLT1A1 LTR MaLR 5 365 0 789 251 45 45 chr5 48753817 48753978 -150876172 - MER58A DNA MER1_type -2256 164 1 245 305 0 0 chr5 48753979 48754038 -150876112 + L2 LINE L2 3255 3313 0 495 298 89 21 chr5 48754260 48754286 -150875864 - MIR SINE MIR -6 256 233 356 302 36 52 chr5 48754286 48754478 -150875672 + MER5A DNA MER1_type 1 189 0 495 298 89 21 chr5 48754478 48754686 -150875464 - MIR SINE MIR -29 233 6 209 366 61 0 chr5 48756957 48757039 -150873111 + L2 LINE L2 3199 3285 -28 1438 213 0 20 chr5 48757161 48757461 -150872689 + MLT1A1 LTR MaLR 72 365 0 1350 248 60 42 chr5 48759052 48759504 -150870646 + MLT1C LTR MaLR 5 464 -3 189 0 0 0 chr5 48760584 48760605 -150869545 + (CATCT)n Simple_repeat Simple_repeat 3 23 0 338 105 0 18 chr5 48760939 48760996 -150869154 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 1843 166 0 0 chr5 48761001 48761279 -150868871 - AluSx SINE Alu -34 278 1 1217 141 40 83 chr5 48763491 48763768 -150866382 + MLT2C2 LTR ERVL 1 265 -199 22205 62 3 5 chr5 48763824 48766688 -150863462 + L1P LINE L1 1 2859 -3287 8884 148 27 15 chr5 48766892 48767817 -150862333 + Tigger1 DNA MER2_type 865 1817 -601 2334 78 0 10 chr5 48767817 48768111 -150862039 - AluY SINE Alu -20 291 1 8884 148 27 15 chr5 48768111 48768721 -150861429 + Tigger1 DNA MER2_type 1817 2418 0 366 222 0 0 chr5 48768961 48769033 -150861117 + L2 LINE L2 3201 3272 0 22 0 0 0 chr5 48769293 48769315 -150860835 + AT_rich Low_complexity Low_complexity 1 22 0 2297 171 6 49 chr5 48769321 48769789 -150860361 - L1MB2 LINE L1 -36 6135 5688 1805 123 31 27 chr5 48769790 48770083 -150860067 + MER7A DNA MER2_type 55 346 0 3763 194 31 12 chr5 48770086 48771344 -150858806 - L1MB2 LINE L1 -491 5680 4389 23 0 0 0 chr5 48771643 48771666 -150858484 + AT_rich Low_complexity Low_complexity 1 23 0 425 262 63 16 chr5 48773729 48773855 -150856295 - L2 LINE L2 0 3313 3182 290 294 98 101 chr5 48774828 48775045 -150855105 + MIR SINE MIR 4 212 -50 359 336 34 17 chr5 48775351 48775470 -150854680 + L2 LINE L2 3150 3270 -2 257 152 22 0 chr5 48775673 48775719 -150854431 - MER63 DNA MER1_type -36 1026 980 476 209 22 0 chr5 48775723 48775814 -150854336 - MER63 DNA MER1_type -311 751 33 435 308 146 39 chr5 48776937 48777301 -150852849 - L1MB2 LINE L1 -2868 3278 2876 750 230 16 95 chr5 48777361 48777613 -150852537 - MIR SINE MIR 0 262 31 623 205 8 8 chr5 48777997 48778119 -150852031 + MER5B DNA MER1_type 1 122 -56 26 0 0 0 chr5 48778208 48778234 -150851916 + AT_rich Low_complexity Low_complexity 1 26 0 1316 146 67 4 chr5 48778355 48778595 -150851555 + MER2 DNA MER2_type 91 345 0 1723 318 98 60 chr5 48778785 48780531 -150849619 - L2 LINE L2 -251 3021 1217 676 268 87 79 chr5 48780559 48781176 -150848974 - L2 LINE L2 0 3313 2717 253 302 212 50 chr5 48781188 48781566 -150848584 - L2 LINE L2 -2118 1196 758 22 56 0 0 chr5 48781591 48781627 -150848523 + AT_rich Low_complexity Low_complexity 1 36 0 190 364 33 66 chr5 48781964 48782115 -150848035 + MER5A DNA MER1_type 44 189 0 603 326 94 40 chr5 48782128 48782659 -150847491 + MLT1K LTR MaLR 3 562 -26 542 179 9 0 chr5 48785119 48785225 -150844925 + FRAM SINE Alu 70 176 0 717 253 261 9 chr5 48785453 48785984 -150844166 + LTR50 LTR ERVL 3 785 -10 1555 221 66 18 chr5 48786208 48786647 -150843503 + MLT1C LTR MaLR 8 467 0 471 304 61 17 chr5 48787838 48788019 -150842131 + MIR SINE MIR 49 237 -25 1151 274 25 38 chr5 48788986 48789384 -150840766 - L2 LINE L2 -831 2483 2091 492 378 101 16 chr5 48789413 48789926 -150840224 - L3 LINE CR1 -353 1224 668 29 0 0 0 chr5 48789948 48789977 -150840173 + AT_rich Low_complexity Low_complexity 1 29 0 1923 141 10 10 chr5 48789977 48790276 -150839874 - AluSx SINE Alu -13 299 1 34 24 0 0 chr5 48790413 48790454 -150839696 + AT_rich Low_complexity Low_complexity 1 41 0 22 35 0 0 chr5 48790706 48790735 -150839415 + AT_rich Low_complexity Low_complexity 1 29 0 3456 27 0 2 chr5 48791192 48791602 -150838548 - L1PA4 LINE L1 -3 6152 5744 397 380 46 37 chr5 48791870 48792301 -150837849 + L1MEd LINE L1 356 790 -5415 594 247 91 62 chr5 48792302 48792787 -150837363 + L1MEd LINE L1 842 1340 -4865 2099 169 9 23 chr5 48792952 48793433 -150836717 + L1P3 LINE L1 6 788 -5673 227 132 0 26 chr5 48793627 48793665 -150836485 - MLT2D LTR ERVL 0 554 518 369 0 0 0 chr5 48793665 48793706 -150836444 + (TG)n Simple_repeat Simple_repeat 2 42 0 2258 213 65 19 chr5 48793706 48793743 -150836407 - MLT2B3 LTR ERVL -3 551 517 474 14 57 0 chr5 48793743 48793813 -150836337 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 2258 213 65 19 chr5 48793813 48794093 -150836057 - MLT2B3 LTR ERVL -37 517 197 1781 165 7 0 chr5 48794093 48794427 -150835723 - AluSx SINE Alu 0 336 1 2258 213 65 19 chr5 48794427 48794633 -150835517 - MLT2B3 LTR ERVL -357 197 2 309 107 67 0 chr5 48794633 48794708 -150835442 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 1198 192 52 119 chr5 48794708 48795135 -150835015 - MLT2D LTR ERVL -15 399 2 452 287 31 36 chr5 48795587 48795782 -150834368 + L1MEd LINE L1 2103 2296 -4100 340 221 11 11 chr5 48795865 48795960 -150834190 + HAL1 LINE L1 2258 2352 -155 5883 7 0 7 chr5 48795971 48796646 -150833504 + L1HS LINE L1 5486 6155 0 726 233 93 5 chr5 48797499 48797692 -150832458 - MER63A DNA MER1_type 0 210 1 597 271 61 32 chr5 48797802 48798340 -150831810 + L1MCc LINE L1 1121 1847 -4891 1583 221 47 0 chr5 48798399 48798721 -150831429 + MER2 DNA MER2_type 9 345 0 212 173 39 0 chr5 48798722 48798774 -150831376 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2459 53 20 0 chr5 48798820 48799119 -150831031 + AluY SINE Alu 1 305 -6 201 147 0 0 chr5 48799122 48799156 -150830994 + (TA)n Simple_repeat Simple_repeat 1 34 0 306 218 35 113 chr5 48799199 48799341 -150830809 + L1MCc LINE L1 2105 2235 -4887 748 248 124 11 chr5 48799446 48799817 -150830333 + L1MCc LINE L1 2564 2976 -4146 2662 13 10 0 chr5 48800528 48800836 -150829314 + AluYb8 SINE Alu 1 311 -7 464 340 63 15 chr5 48801677 48802000 -150828150 + HERVL LTR ERVL 1776 2120 -3033 309 68 0 0 chr5 48802209 48802253 -150827897 + (TA)n Simple_repeat Simple_repeat 2 45 0 180 0 0 0 chr5 48802259 48802279 -150827871 + (CA)n Simple_repeat Simple_repeat 2 21 0 1888 193 135 9 chr5 48802297 48802749 -150827401 + LTR22 LTR ERVK 1 509 0 1228 235 58 36 chr5 48802749 48803161 -150826989 - L1MA9 LINE L1 -96 6216 5796 5237 135 16 16 chr5 48803518 48804421 -150825729 + L1PA10 LINE L1 5262 6164 -4 464 262 90 0 chr5 48805150 48805295 -150824855 - MIR SINE MIR -34 228 71 540 56 0 0 chr5 48806265 48806336 -150823814 + L1PA6 LINE L1 6078 6148 -6 24 32 0 0 chr5 48806336 48806367 -150823783 + AT_rich Low_complexity Low_complexity 1 31 0 207 155 56 14 chr5 48806518 48806589 -150823561 + (TA)n Simple_repeat Simple_repeat 2 75 0 35 0 0 0 chr5 48808148 48808183 -150821967 + AT_rich Low_complexity Low_complexity 1 35 0 502 296 82 61 chr5 48808312 48808829 -150821321 + L1MEc LINE L1 862 1407 -4989 198 71 0 0 chr5 48808829 48808857 -150821293 + (CA)n Simple_repeat Simple_repeat 1 28 0 502 296 82 61 chr5 48808857 48809228 -150820922 + L1MEc LINE L1 1407 1769 -4627 1231 283 49 47 chr5 48809251 48810340 -150819810 + L1MEc LINE L1 1849 2894 -3321 309 109 0 0 chr5 48810772 48810818 -150819332 + (TG)n Simple_repeat Simple_repeat 1 46 0 411 222 28 23 chr5 48811345 48811521 -150818629 + (TA)n Simple_repeat Simple_repeat 2 178 0 252 319 18 18 chr5 48811808 48811971 -150818179 + CT-rich Low_complexity Low_complexity 1 163 0 207 228 24 31 chr5 48811985 48812112 -150818038 + CT-rich Low_complexity Low_complexity 1 126 0 21 0 0 0 chr5 48812421 48812442 -150817708 + AT_rich Low_complexity Low_complexity 1 21 0 1430 174 52 11 chr5 48812718 48813098 -150817052 + AluJb SINE Alu 1 391 0 746 259 25 15 chr5 48813446 48813647 -150816503 + MER58A DNA MER1_type 7 209 -15 998 345 138 8 chr5 48813846 48814505 -150815645 + L2 LINE L2 2177 2921 -393 722 265 89 22 chr5 48814634 48815004 -150815146 - LTR37B LTR ERV1 -73 395 1 429 327 27 0 chr5 48815012 48815162 -150814988 - MIR SINE MIR -106 156 3 390 365 50 21 chr5 48815559 48815841 -150814309 - L1ME4a LINE L1 -213 5908 5619 4704 139 31 1 chr5 48816468 48817251 -150812899 - L1PA16 LINE L1 -16 6150 5345 1798 112 11 14 chr5 48817287 48817565 -150812585 - L1PA8A LINE L1 -3 6128 5852 404 58 0 0 chr5 48817587 48817639 -150812511 - MLT2A1 LTR ERVL 0 444 393 292 134 0 30 chr5 48817679 48817746 -150812404 + (TG)n Simple_repeat Simple_repeat 1 65 0 241 152 0 0 chr5 48817903 48817949 -150812201 + LTR66 LTR ERVL 394 439 -171 * 2661 95 22 5 chr5 48817945 48818312 -150811838 - MLT2A1 LTR ERVL -71 373 1 3313 253 35 2 chr5 48818312 48819347 -150810803 - L1PA16 LINE L1 -810 5336 4268 413 262 30 82 chr5 48819464 48819650 -150810500 + MLT1H1 LTR MaLR 373 555 0 237 33 0 0 chr5 48821469 48821499 -150808651 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr5 48821692 48821713 -150808437 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr5 48822093 48822125 -150808025 + AT_rich Low_complexity Low_complexity 1 32 0 1156 144 18 52 chr5 48822422 48822651 -150807499 + Tigger2a DNA MER2_type 2 222 -212 356 167 26 13 chr5 48823228 48823306 -150806844 - MER67C LTR ERV1 -37 673 595 1540 168 3 99 chr5 48823328 48823710 -150806440 + MER7A DNA MER2_type 4 346 0 1736 199 17 11 chr5 48823902 48824264 -150805886 + MLT1A1 LTR MaLR 2 365 0 9944 206 26 17 chr5 48825121 48825209 -150804941 - L1PA16 LINE L1 -2889 3257 3171 183 80 0 0 chr5 48825209 48825234 -150804916 + (TG)n Simple_repeat Simple_repeat 2 26 0 9944 206 26 17 chr5 48825234 48827438 -150802712 - L1PA16 LINE L1 -2975 3171 944 194 308 137 8 chr5 48827547 48827664 -150802486 + MIR SINE MIR 131 262 0 237 65 0 0 chr5 48828183 48828214 -150801936 + (TG)n Simple_repeat Simple_repeat 2 32 0 247 305 0 42 chr5 48828367 48828485 -150801665 + MIR SINE MIR 98 210 -52 23 0 0 0 chr5 48828540 48828563 -150801587 + AT_rich Low_complexity Low_complexity 1 23 0 4816 224 6 29 chr5 48830615 48831866 -150798284 - L1 LINE L1 -1359 4787 3566 775 226 10 25 chr5 48831879 48832083 -150798067 + L1P LINE L1 3354 3554 -2592 225 0 0 0 chr5 48832117 48832142 -150798008 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 1299 215 32 54 chr5 48832422 48832794 -150797356 + MLT1A1 LTR MaLR 2 365 0 1784 185 48 42 chr5 48833576 48834136 -150796014 + MLT2A2 LTR ERVL 1 554 0 32 43 0 0 chr5 48834193 48834239 -150795911 + AT_rich Low_complexity Low_complexity 1 46 0 251 274 27 0 chr5 48834542 48834615 -150795535 + L1MC4a LINE L1 6642 6716 -1092 742 276 49 28 chr5 48834641 48834927 -150795223 + L1MC4 LINE L1 6780 7071 -971 305 273 88 49 chr5 48834945 48835427 -150794723 + L1MC5 LINE L1 7130 7470 -492 3563 158 24 38 chr5 48835698 48836098 -150794052 + Tigger3b DNA MER2_type 3 392 -2636 2195 63 3 21 chr5 48836098 48836412 -150793738 - AluY SINE Alu 0 309 1 3563 158 24 38 chr5 48836412 48836717 -150793433 + Tigger3b DNA MER2_type 392 700 -531 456 118 26 0 chr5 48836721 48836797 -150793353 + AluS SINE Alu 1 78 -234 233 260 0 0 chr5 48836901 48836951 -150793199 + GA-rich Low_complexity Low_complexity 1 50 0 933 169 18 0 chr5 48838750 48838916 -150791234 - MLT1A1 LTR MaLR 0 365 197 2006 229 26 9 chr5 48838921 48839340 -150790810 - MLT2B3 LTR ERVL -128 426 1 262 253 35 46 chr5 48839651 48839738 -150790412 - MER5A DNA MER1_type -2 187 102 957 163 62 0 chr5 48840411 48840589 -150789561 + MSTA LTR MaLR 240 428 0 22 0 0 0 chr5 48840621 48840643 -150789507 + AT_rich Low_complexity Low_complexity 1 22 0 378 0 0 0 chr5 48841223 48841265 -150788885 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 316 319 65 22 chr5 48842019 48842157 -150787993 + MIR SINE MIR 28 171 -91 1427 111 58 0 chr5 48842157 48842400 -150787750 + L1MA6 LINE L1 6038 6294 -6 454 239 181 32 chr5 48842866 48843021 -150787129 - MER5A DNA MER1_type 0 189 12 1524 159 69 39 chr5 48843359 48843723 -150786427 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr5 48843900 48843943 -150786207 + AT_rich Low_complexity Low_complexity 1 43 0 216 0 0 0 chr5 48844641 48844665 -150785485 + (A)n Simple_repeat Simple_repeat 1 24 0 2017 60 4 30 chr5 48844896 48845165 -150784985 - AluY SINE Alu -13 298 37 265 169 39 0 chr5 48845281 48845358 -150784792 + (TATG)n Simple_repeat Simple_repeat 2 81 0 271 229 0 48 chr5 48845388 48845471 -150784679 - L1MC4 LINE L1 -1339 6703 6625 221 282 14 0 chr5 48845475 48845546 -150784604 + (TA)n Simple_repeat Simple_repeat 2 73 0 24 0 0 0 chr5 48845708 48845732 -150784418 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 48845856 48845884 -150784266 + AT_rich Low_complexity Low_complexity 1 28 0 48 43 0 0 chr5 48846068 48846137 -150784013 + AT_rich Low_complexity Low_complexity 1 69 0 4844 190 30 12 chr5 48846282 48847412 -150782738 + L1MA7 LINE L1 5145 6290 -1 15976 84 8 6 chr5 48847665 48848044 -150782106 - HERVL LTR ERVL -292 5362 4985 2457 22 4 0 chr5 48848044 48848319 -150781831 - AluYa5 SINE Alu -9 302 27 15976 84 8 6 chr5 48848319 48850635 -150779515 - HERVL LTR ERVL -669 4985 2609 224 220 9 37 chr5 48851488 48851597 -150778553 + (TTAA)n Simple_repeat Simple_repeat 4 109 0 908 202 6 0 chr5 48852968 48853136 -150777014 + AluJb SINE Alu 136 304 -8 210 240 0 0 chr5 48854093 48854143 -150776007 + A-rich Low_complexity Low_complexity 1 50 0 2132 79 4 4 chr5 48855278 48855558 -150774592 - AluY SINE Alu -2 309 30 2117 125 0 25 chr5 48855624 48855945 -150774205 - AluSq SINE Alu 0 313 1 2586 114 8 0 chr5 48856084 48856460 -150773690 + L1P4 LINE L1 5304 5682 -486 370 239 39 15 chr5 48856476 48856606 -150773544 - LTR37B LTR ERV1 -8 460 328 550 61 102 31 chr5 48856838 48856887 -150773263 - MLT2A1 LTR ERVL 0 444 400 257 75 25 0 chr5 48856887 48856927 -150773223 + (TG)n Simple_repeat Simple_repeat 2 42 0 550 61 102 31 chr5 48856927 48856975 -150773175 - MLT2A1 LTR ERVL -44 400 340 4305 194 27 37 chr5 48856975 48857869 -150772281 - L1MC1 LINE L1 -115 6218 5316 200 33 0 33 chr5 48857869 48857899 -150772251 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1575 171 4 4 chr5 48857903 48858172 -150771978 - AluSx SINE Alu -30 282 14 4305 194 27 37 chr5 48858172 48858247 -150771903 - L1MC1 LINE L1 -1020 5313 5254 21 0 0 0 chr5 48858627 48858648 -150771502 + AT_rich Low_complexity Low_complexity 1 21 0 411 330 63 42 chr5 48858919 48859204 -150770946 + L2 LINE L2 3021 3311 -2 1034 225 0 0 chr5 48859609 48859822 -150770328 + L1PB4 LINE L1 5941 6153 -3 2037 115 4 7 chr5 48860114 48860423 -150769727 + AluSx SINE Alu 5 312 0 323 313 35 55 chr5 48860494 48860695 -150769455 + MIR3 SINE MIR 12 208 0 189 0 0 0 chr5 48861286 48861307 -150768843 + (CA)n Simple_repeat Simple_repeat 2 22 0 3326 84 13 4 chr5 48861447 48861900 -150768250 + LTR22A LTR ERVK 1 457 -1 568 140 21 0 chr5 48861974 48862067 -150768083 + HERVK22 LTR ERVK 91 185 -6652 1677 152 77 37 chr5 48862175 48862498 -150767652 - MER1B DNA MER1_type 0 337 2 2630 52 0 0 chr5 48863009 48863318 -150766832 + AluY SINE Alu 2 310 -1 477 0 0 0 chr5 48864846 48864899 -150765251 + (CA)n Simple_repeat Simple_repeat 2 54 0 433 162 57 57 chr5 48865041 48865146 -150765004 + MLT1D LTR MaLR 401 505 0 1576 204 64 3 chr5 48865203 48865517 -150764633 - MSTB LTR MaLR 0 426 94 1455 124 40 12 chr5 48865553 48865803 -150764347 - L1PA13 LINE L1 -20 6143 5887 432 159 0 0 chr5 48865800 48865869 -150764281 + L1P LINE L1 4926 4994 -1152 * 382 111 0 0 chr5 48865869 48865923 -150764227 - MSTB LTR MaLR -371 55 2 2006 148 0 0 chr5 48865947 48866251 -150763899 + AluSq SINE Alu 1 304 -9 2574 116 97 5 chr5 48866644 48867048 -150763102 + MLT2A1 LTR ERVL 4 444 0 18408 104 7 20 chr5 48867048 48869741 -150760409 + HERVL-A1 LTR ERVL 1 2658 -2996 2034 259 77 22 chr5 48869865 48870876 -150759274 - L1M4 LINE L1 -1396 5248 4182 684 274 23 37 chr5 48870909 48871208 -150758942 + L1M4 LINE L1 1341 1635 -4907 455 274 14 94 chr5 48871211 48871423 -150758727 - L1M4 LINE L1 -6216 326 132 4588 184 32 12 chr5 48871432 48872985 -150757165 + L1PA16 LINE L1 4575 6159 -7 274 237 31 72 chr5 48872984 48873081 -150757069 - L1M4 LINE L1 -6434 108 16 * 1319 218 26 49 chr5 48873142 48873449 -150756701 + AluJo SINE Alu 1 300 -12 218 315 112 66 chr5 48874133 48874330 -150755820 - L2 LINE L2 -1837 1477 1272 1345 248 57 55 chr5 48874355 48874830 -150755320 - MLT2B1 LTR ERVL -44 476 1 1798 146 159 26 chr5 48875177 48875555 -150754595 - MSTA LTR MaLR 0 428 1 5896 192 24 18 chr5 48875647 48877943 -150752207 + L1PA16 LINE L1 3829 6164 -2 349 271 96 68 chr5 48877944 48878236 -150751914 + L1ME3A LINE L1 4622 4921 -1225 1181 296 118 16 chr5 48878238 48878924 -150751226 + L1ME3A LINE L1 5374 6129 -41 1716 120 4 0 chr5 48880835 48881068 -150749082 - AluSx SINE Alu -45 267 34 367 145 0 92 chr5 48881101 48881177 -150748973 + Charlie3 DNA MER1_type 1 69 -2641 2013 141 7 0 chr5 48882169 48882468 -150747682 + AluSq SINE Alu 6 306 -7 929 233 150 109 chr5 48883839 48884427 -150745723 - MLT1E1 LTR MaLR -37 617 6 290 339 39 15 chr5 48884482 48884612 -150745538 + MIR3 SINE MIR 44 176 -32 323 49 0 0 chr5 48884680 48884721 -150745429 - MADE1 DNA Mariner 0 80 40 1071 319 163 6 chr5 48885353 48886070 -150744080 + L2 LINE L2 1572 2401 -913 284 358 52 36 chr5 48886947 48887254 -150742896 - HERVL LTR ERVL -2297 3357 3046 757 216 42 84 chr5 48887741 48888028 -150742122 + MER52A LTR ERV1 398 672 -1083 * 2330 214 12 0 chr5 48888022 48888453 -150741697 + MER52A LTR ERV1 1320 1755 0 597 223 137 0 chr5 48888462 48888653 -150741497 + MLT1D LTR MaLR 284 467 0 233 310 9 35 chr5 48888658 48888774 -150741376 + L1M4 LINE L1 3284 3396 -2750 640 282 29 12 chr5 48888868 48889113 -150741037 + L1MD3 LINE L1 7728 7976 -19 2127 123 0 0 chr5 48889121 48889422 -150740728 + AluSc SINE Alu 1 301 -8 370 196 44 101 chr5 48889468 48889588 -150740562 - Charlie7 DNA MER1_type -903 1709 1599 2447 71 0 0 chr5 48889588 48889899 -150740251 - AluY SINE Alu 0 311 1 370 196 44 101 chr5 48889899 48889936 -150740214 - Charlie7 DNA MER1_type -1013 1599 1561 21 36 0 0 chr5 48890008 48890036 -150740114 + AT_rich Low_complexity Low_complexity 1 28 0 33 0 0 0 chr5 48890168 48890201 -150739949 + AT_rich Low_complexity Low_complexity 1 33 0 1570 207 0 17 chr5 48890286 48890399 -150739751 + AluJb SINE Alu 3 116 -196 240 35 0 0 chr5 48890399 48890428 -150739722 + (CA)n Simple_repeat Simple_repeat 2 30 0 1570 207 0 17 chr5 48890428 48890609 -150739541 + AluJb SINE Alu 116 292 -20 253 292 83 33 chr5 48891305 48891425 -150738725 - MIR SINE MIR -37 225 100 222 253 0 0 chr5 48891553 48891636 -150738514 + (TATG)n Simple_repeat Simple_repeat 2 84 0 261 134 23 64 chr5 48891658 48891829 -150738321 + (TA)n Simple_repeat Simple_repeat 1 164 0 1543 268 61 25 chr5 48892772 48893669 -150736481 + L1P3 LINE L1 1 1035 -4840 282 56 0 0 chr5 48893882 48893918 -150736232 + (TC)n Simple_repeat Simple_repeat 1 36 0 550 333 77 38 chr5 48894624 48895015 -150735135 - L2 LINE L2 -2768 546 141 189 74 0 0 chr5 48895403 48895430 -150734720 + (A)n Simple_repeat Simple_repeat 1 27 0 1363 203 20 37 chr5 48895540 48895889 -150734261 - MLT1A1 LTR MaLR 0 365 23 538 281 104 37 chr5 48895905 48896367 -150733783 + Charlie2 DNA MER1_type 1888 2380 -482 477 367 68 21 chr5 48896730 48897204 -150732946 + L2 LINE L2 2282 2777 -537 709 186 36 0 chr5 48897457 48897624 -150732526 - L1MB7 LINE L1 -9 6175 6003 2049 236 62 62 chr5 48897621 48898101 -150732049 - L1MB7 LINE L1 -193 5975 5497 1923 142 3 29 chr5 48898101 48898412 -150731738 - AluSx SINE Alu -3 309 7 2049 236 62 62 chr5 48898412 48899379 -150730771 - L1MB7 LINE L1 -671 5497 4568 21 0 0 0 chr5 48899500 48899521 -150730629 + AT_rich Low_complexity Low_complexity 1 21 0 269 343 55 30 chr5 48900163 48900364 -150729786 + MIR SINE MIR 1 206 -56 22 0 0 0 chr5 48900497 48900519 -150729631 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr5 48901350 48901377 -150728773 + AT_rich Low_complexity Low_complexity 1 27 0 248 313 83 0 chr5 48901654 48901750 -150728400 + MIR SINE MIR 113 216 -46 2397 40 0 52 chr5 48902050 48902377 -150727773 + AluY SINE Alu 1 310 -1 213 135 27 0 chr5 48902655 48902692 -150727458 + GA-rich Low_complexity Low_complexity 2 39 0 610 261 137 13 chr5 48903020 48903254 -150726896 + MLT1I LTR MaLR 147 409 0 272 339 38 33 chr5 48903254 48903437 -150726713 - L2 LINE L2 -736 2578 2395 44 0 0 0 chr5 48903978 48904022 -150726128 + AT_rich Low_complexity Low_complexity 1 44 0 356 259 86 17 chr5 48905316 48905490 -150724660 - L1ME3 LINE L1 -9 6153 5968 600 277 39 17 chr5 48905513 48905744 -150724406 + L1M4 LINE L1 25 260 -6282 1367 309 59 32 chr5 48905761 48905896 -150724254 + L1M4 LINE L1 323 453 -6089 198 0 0 0 chr5 48905896 48905918 -150724232 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1367 309 59 32 chr5 48905918 48906412 -150723738 + L1M4 LINE L1 453 969 -5573 577 214 69 11 chr5 48906405 48906681 -150723469 + L1 LINE L1 3193 3557 -2589 * 680 179 0 8 chr5 48906683 48906817 -150723333 + L1MA8 LINE L1 6020 6152 -139 362 340 123 8 chr5 48908012 48908247 -150721903 + MLT1I LTR MaLR 1 262 -147 701 278 67 34 chr5 48908634 48909074 -150721076 - L1M4 LINE L1 -1313 4833 4373 60 27 0 0 chr5 48909074 48909148 -150721002 + AT_rich Low_complexity Low_complexity 1 74 0 1578 197 13 20 chr5 48909326 48909631 -150720519 + AluJb SINE Alu 1 303 -9 295 373 0 0 chr5 48909714 48909832 -150720318 - HERV16 LTR ERVL -2389 3096 2979 414 257 38 9 chr5 48909906 48910011 -150720139 - HERV16 LTR ERVL -3670 1326 1219 540 278 66 26 chr5 48910040 48910267 -150719883 - HERV16 LTR ERVL -3830 1166 931 917 91 68 0 chr5 48910277 48910409 -150719741 + MSTA LTR MaLR 1 141 -287 3409 194 37 18 chr5 48910420 48911519 -150718631 - L1M2 LINE L1 -645 5667 4549 7491 129 20 0 chr5 48911551 48912680 -150717470 - THE1B-int LTR MaLR -428 1152 1 1876 178 40 9 chr5 48912682 48913031 -150717119 - THE1B LTR MaLR -2 362 3 3094 206 16 6 chr5 48913033 48913721 -150716429 - L1M4 LINE L1 -1802 4344 3650 198 103 0 0 chr5 48914349 48914378 -150715772 + (TC)n Simple_repeat Simple_repeat 2 30 0 2583 150 58 14 chr5 48914378 48914892 -150715258 - Tigger3(Golem) DNA MER2_type -2 3027 2491 1249 148 16 20 chr5 48914892 48915142 -150715008 - AluSx SINE Alu -17 295 47 204 355 21 11 chr5 48915464 48915557 -150714593 + MIR SINE MIR 45 138 -124 231 325 0 12 chr5 48916805 48916888 -150713262 - MLT1E LTR MaLR -511 82 1 1260 241 26 60 chr5 48916888 48917303 -150712847 + L1M4 LINE L1 3659 4056 -2090 1378 208 115 20 chr5 48917303 48917659 -150712491 + MLT1B LTR MaLR 1 390 0 1260 241 26 60 chr5 48917659 48917740 -150712410 + L1M4 LINE L1 4056 4138 -2008 1958 110 0 27 chr5 48918234 48918535 -150711615 - AluSx SINE Alu -17 295 3 189 0 0 0 chr5 48918538 48918559 -150711591 + (T)n Simple_repeat Simple_repeat 1 21 0 1354 232 133 60 chr5 48918560 48919465 -150710685 + L1M4 LINE L1 4110 5104 -1042 621 185 23 23 chr5 48920484 48920614 -150709536 + MLT1H LTR MaLR 381 510 -39 245 137 39 0 chr5 48921537 48921588 -150708562 + CT-rich Low_complexity Low_complexity 4 56 0 25 0 0 0 chr5 48921755 48921780 -150708370 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 48922381 48922404 -150707746 + AT_rich Low_complexity Low_complexity 1 23 0 30 52 0 39 chr5 48922560 48922637 -150707513 + AT_rich Low_complexity Low_complexity 1 74 0 240 59 0 0 chr5 48922692 48922726 -150707424 + (CA)n Simple_repeat Simple_repeat 2 35 0 24 67 0 0 chr5 48923060 48923105 -150707045 + AT_rich Low_complexity Low_complexity 1 45 0 3014 93 40 5 chr5 48923648 48923686 -150706464 - MLT2A1 LTR ERVL 0 444 409 491 45 15 0 chr5 48923686 48923752 -150706398 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 3014 93 40 5 chr5 48923752 48924141 -150706009 - MLT2A1 LTR ERVL -35 409 2 2036 80 3 0 chr5 48924142 48924429 -150705721 - HERVL-A1 LTR ERVL 0 5654 5367 360 0 0 0 chr5 48925151 48925191 -150704959 + (A)n Simple_repeat Simple_repeat 1 40 0 204 320 39 13 chr5 48925833 48925911 -150704239 + L2 LINE L2 3222 3301 -12 493 225 28 49 chr5 48926027 48926169 -150703981 + MLT1A2 LTR MaLR 1 139 -226 228 122 0 0 chr5 48926250 48926291 -150703859 + (GA)n Simple_repeat Simple_repeat 2 42 0 1847 237 21 5 chr5 48926291 48926709 -150703441 + MSTB LTR MaLR 2 426 0 6565 218 46 11 chr5 48926720 48928084 -150702066 + MSTB-int LTR MaLR 6 1417 -234 1846 145 49 20 chr5 48928138 48928482 -150701668 - L1PB3 LINE L1 -2 6152 5799 242 220 0 0 chr5 48928482 48928532 -150701618 + MSTB-int LTR MaLR 1414 1463 -188 860 199 42 0 chr5 48928538 48928704 -150701446 + MSTB LTR MaLR 239 411 -15 279 0 0 0 chr5 48928713 48928744 -150701406 + (CA)n Simple_repeat Simple_repeat 2 32 0 643 272 5 21 chr5 48928747 48928938 -150701212 + MLT1A2 LTR MaLR 187 374 0 243 0 0 0 chr5 48929084 48929111 -150701039 + (A)n Simple_repeat Simple_repeat 1 27 0 507 305 149 19 chr5 48929114 48929429 -150700721 - L2 LINE L2 -774 2540 2185 406 321 119 22 chr5 48929430 48929741 -150700409 - L2 LINE L2 -1332 1982 1642 1808 127 24 3 chr5 48929775 48930067 -150700083 + AluSg SINE Alu 3 300 -10 207 100 0 0 chr5 48930068 48930098 -150700052 + (GGAA)n Simple_repeat Simple_repeat 1 30 0 1964 61 389 162 chr5 48930100 48930674 -150699476 - LTR12 LTR ERV1 -3 711 8 183 100 0 0 chr5 48930675 48930705 -150699445 + (GGAA)n Simple_repeat Simple_repeat 4 33 0 588 314 106 16 chr5 48930705 48931008 -150699142 - L2 LINE L2 -1686 1628 1299 186 373 45 0 chr5 48931204 48931271 -150698879 + L2 LINE L2 3153 3222 -50 2549 58 0 0 chr5 48931903 48932212 -150697938 + AluY SINE Alu 1 309 -2 209 336 46 38 chr5 48932215 48932453 -150697697 + L2 LINE L2 2266 2505 -809 2027 117 3 16 chr5 48933897 48934204 -150695946 - AluSq SINE Alu -10 303 1 252 130 0 0 chr5 48935528 48935574 -150694576 + (TC)n Simple_repeat Simple_repeat 1 46 0 1593 131 24 57 chr5 48935987 48936311 -150693839 - AluSx SINE Alu 0 314 1 2411 64 10 10 chr5 48936484 48936795 -150693355 - AluY SINE Alu 0 311 1 44 35 0 0 chr5 48936890 48936948 -150693202 + AT_rich Low_complexity Low_complexity 1 58 0 304 228 97 53 chr5 48937497 48937611 -150692539 + L1MEc LINE L1 2147 2265 -4131 1078 304 42 4 chr5 48937660 48938111 -150692039 + L1ME3 LINE L1 5515 5982 -180 * 3397 255 63 34 chr5 48938110 48939969 -150690181 - L1MB7 LINE L1 -8 6176 4231 231 36 0 0 chr5 48939969 48939997 -150690153 + (TG)n Simple_repeat Simple_repeat 2 29 0 3397 255 63 34 chr5 48939997 48940574 -150689576 - L1MB7 LINE L1 -1953 4231 3672 563 283 84 11 chr5 48940562 48941003 -150689147 - L1MB7 LINE L1 -2780 3366 2894 * 830 227 28 26 chr5 48941011 48941357 -150688793 + L1M1 LINE L1 3315 3743 -3822 312 146 19 39 chr5 48941438 48941541 -150688609 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 527 106 11 78 chr5 48941568 48941929 -150688221 + (TA)n Simple_repeat Simple_repeat 1 336 0 6034 227 45 14 chr5 48942033 48942137 -150688013 - L1 LINE L1 -2351 5214 5115 198 0 0 0 chr5 48942137 48942159 -150687991 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 6034 227 45 14 chr5 48942159 48943921 -150686229 - L1 LINE L1 -2450 5115 3281 576 198 0 86 chr5 48943950 48944083 -150686067 + MER4E LTR ERV1 1 222 -650 2097 122 0 0 chr5 48944083 48944377 -150685773 - AluSg SINE Alu -16 294 1 576 198 0 86 chr5 48944377 48944436 -150685714 + MER4E LTR ERV1 222 284 -588 * 1477 207 41 32 chr5 48944433 48944776 -150685374 + MER4D LTR ERV1 546 891 -12 342 264 125 7 chr5 48944836 48944980 -150685170 - L1 LINE L1 -4357 3208 3048 2812 189 64 7 chr5 48944981 48945546 -150684604 + Tigger1 DNA MER2_type 1 597 -1821 21 0 0 0 chr5 48946135 48946156 -150683994 + AT_rich Low_complexity Low_complexity 1 21 0 2264 239 42 16 chr5 48947165 48947713 -150682437 + REP3 LTR ERV 1 562 0 1468 198 13 48 chr5 48947896 48948348 -150681802 - MLT1D LTR MaLR 0 505 1 657 271 48 33 chr5 48949865 48950075 -150680075 + MER58A DNA MER1_type 2 214 -10 416 248 9 0 chr5 48950326 48950439 -150679711 + LTR43 LTR ERV1 180 293 -309 2171 161 36 5 chr5 48950598 48951015 -150679135 + L1MB1 LINE L1 5430 5859 -309 517 207 0 14 chr5 48951015 48951160 -150678990 + CT-rich Low_complexity Low_complexity 3 145 0 1524 206 0 7 chr5 48951160 48951442 -150678708 - AluJo SINE Alu -32 280 1 1513 155 73 16 chr5 48951445 48951748 -150678402 + L1MB1 LINE L1 5845 6164 -4 301 340 11 0 chr5 48953250 48953344 -150676806 + MIR3 SINE MIR 76 170 -38 2420 79 0 0 chr5 48953534 48953826 -150676324 + AluSc SINE Alu 6 297 -12 344 326 85 13 chr5 48953975 48954199 -150675951 - MIR SINE MIR -21 241 2 1574 201 27 27 chr5 48954265 48954634 -150675516 + MLT1A2 LTR MaLR 4 372 -2 297 0 0 0 chr5 48954692 48954725 -150675425 + (A)n Simple_repeat Simple_repeat 1 33 0 594 167 28 0 chr5 48955085 48955193 -150674957 + MLT1C LTR MaLR 1 111 -356 207 69 0 0 chr5 48956565 48956594 -150673556 + (TTC)n Simple_repeat Simple_repeat 2 30 0 1582 186 29 7 chr5 48956648 48956927 -150673223 - AluJo SINE Alu -19 293 9 304 280 32 72 chr5 48956976 48957101 -150673049 - L1MB8 LINE L1 -127 6046 5920 1319 220 74 59 chr5 48957101 48957621 -150672529 + MER39 LTR ERV1 1 701 -6 736 202 46 12 chr5 48957626 48957799 -150672351 - L1ME1 LINE L1 -243 5923 5745 1019 233 11 23 chr5 48957807 48958069 -150672081 + MLT1E1 LTR MaLR 389 497 -8 456 319 78 53 chr5 48958120 48958555 -150671595 - L2 LINE L2 -351 2963 2518 197 318 254 4 chr5 48959013 48959265 -150670885 - L2 LINE L2 -1302 2012 1698 1906 158 106 35 chr5 48960548 48960757 -150669393 - L1MB7 LINE L1 -59 6125 5932 2050 111 93 35 chr5 48960757 48961101 -150669049 + THE1B LTR MaLR 1 364 0 1906 158 106 35 chr5 48961101 48961346 -150668804 - L1MB7 LINE L1 -252 5932 5639 2088 191 115 11 chr5 48961469 48961931 -150668219 - MLT2B1 LTR ERVL -10 510 1 22 56 0 0 chr5 48962164 48962200 -150667950 + AT_rich Low_complexity Low_complexity 1 36 0 727 311 31 4 chr5 48962258 48962483 -150667667 + MIR SINE MIR 19 249 -13 27 92 0 0 chr5 48964244 48964320 -150665830 + AT_rich Low_complexity Low_complexity 1 76 0 234 0 0 0 chr5 48964364 48964390 -150665760 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 277 361 0 0 chr5 48964391 48964463 -150665687 - L2 LINE L2 -15 3257 3186 2553 270 82 77 chr5 48964467 48964546 -150665604 - L2 LINE L2 -12 3301 3224 2301 88 3 0 chr5 48964546 48964852 -150665298 + AluY SINE Alu 3 309 -2 2553 270 82 77 chr5 48964852 48964991 -150665159 - L2 LINE L2 -89 3224 3087 333 0 0 0 chr5 48964991 48965028 -150665122 + (TG)n Simple_repeat Simple_repeat 1 37 0 2553 270 82 77 chr5 48965028 48966388 -150663762 - L2 LINE L2 -226 3087 1716 634 179 43 0 chr5 48966943 48967060 -150663090 + MLT1C LTR MaLR 1 122 -345 2016 78 63 0 chr5 48967060 48967331 -150662819 + AluSq SINE Alu 1 288 -25 266 247 0 62 chr5 48967338 48967402 -150662748 + L1MB5 LINE L1 3445 3503 -2643 2019 154 0 7 chr5 48967402 48967701 -150662449 + AluJb SINE Alu 3 299 -13 266 247 0 62 chr5 48967701 48967733 -150662417 + L1MB5 LINE L1 3503 3535 -2611 5359 205 91 44 chr5 48967744 48968422 -150661728 + L1MB5 LINE L1 3837 4482 -1692 1693 166 37 64 chr5 48968422 48968796 -150661354 - MLT1A1 LTR MaLR 0 365 2 5359 205 91 44 chr5 48968796 48969736 -150660414 + L1MB5 LINE L1 4482 5589 -585 2482 74 0 6 chr5 48969736 48970048 -150660102 + AluY SINE Alu 1 310 -1 5359 205 91 44 chr5 48970048 48970639 -150659511 + L1MB5 LINE L1 5589 6151 -23 23 68 0 0 chr5 48971491 48971535 -150658615 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 48973928 48973949 -150656201 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 48974477 48974508 -150655642 + AT_rich Low_complexity Low_complexity 1 31 0 893 286 5 5 chr5 48977018 48977235 -150652915 + MIR SINE MIR 43 259 -3 183 339 118 39 chr5 48977332 48977459 -150652691 + MIR3 SINE MIR 24 160 -48 215 293 53 0 chr5 48977462 48977537 -150652613 - MIR3 SINE MIR -6 202 124 23 33 0 0 chr5 48979197 48979227 -150650923 + AT_rich Low_complexity Low_complexity 1 30 0 330 246 201 0 chr5 48979527 48979661 -150650489 - LTR33 LTR ERVL -348 173 13 420 206 11 56 chr5 48980120 48980300 -150649850 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 229 152 61 45 chr5 48980496 48980562 -150649588 + L1MC4 LINE L1 6637 6703 -1339 285 279 0 15 chr5 48980562 48980698 -150649452 + (TA)n Simple_repeat Simple_repeat 2 135 0 388 313 216 19 chr5 48980797 48981168 -150648982 - L2 LINE L2 -47 3266 2823 1366 287 121 29 chr5 48981182 48981803 -150648347 - L2 LINE L2 -640 2674 1997 1738 182 0 13 chr5 48981803 48982110 -150648040 + AluJo SINE Alu 1 303 -9 1811 103 82 17 chr5 48982776 48983068 -150647082 + AluSx SINE Alu 1 311 -1 187 313 24 48 chr5 48985404 48985487 -150644663 - L2 LINE L2 -13 3300 3220 180 264 56 28 chr5 48985626 48985698 -150644452 - L2 LINE L2 -214 3058 2985 276 257 14 0 chr5 48986384 48986458 -150643692 - LTR37A LTR ERV1 -241 185 111 1341 270 39 67 chr5 48986712 48987430 -150642720 - MER31-int LTR ERV1 -835 4101 3404 254 332 78 66 chr5 48988322 48988378 -150641772 - MLT1K LTR MaLR -6 582 528 1348 115 60 23 chr5 48988378 48988596 -150641554 + MER30 DNA MER1_type 5 230 0 254 332 78 66 chr5 48988596 48988783 -150641367 - MLT1K LTR MaLR -60 528 336 222 37 0 0 chr5 48989457 48989484 -150640666 + (TA)n Simple_repeat Simple_repeat 1 27 0 2285 73 0 51 chr5 48989484 48989800 -150640350 - AluSg1 SINE Alu -9 300 1 730 307 79 59 chr5 48989823 48990227 -150639923 - L2 LINE L2 -3 3269 2858 1483 197 53 11 chr5 48990299 48990583 -150639567 + AluJb SINE Alu 6 301 -11 27 0 0 0 chr5 48990973 48991000 -150639150 + AT_rich Low_complexity Low_complexity 1 27 0 2073 131 6 3 chr5 48991549 48991861 -150638289 - AluSq SINE Alu 0 313 1 264 330 108 52 chr5 48992107 48992919 -150637231 - L2 LINE L2 -1707 1607 750 332 196 214 18 chr5 48993398 48993498 -150636652 + AluJb SINE Alu 3 128 -174 225 0 0 0 chr5 48993498 48993523 -150636627 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 332 196 214 18 chr5 48993523 48993534 -150636616 + AluJb SINE Alu 128 136 -166 419 321 37 23 chr5 48995117 48995335 -150634815 - MIR SINE MIR -5 257 37 673 198 43 188 chr5 48995945 48996313 -150633837 + L1MD2 LINE L1 5914 6228 -14 193 308 0 0 chr5 48996456 48996508 -150633642 + L2 LINE L2 3216 3267 -5 1481 187 11 15 chr5 48996526 48996793 -150633357 + AluJo SINE Alu 26 291 -21 252 77 0 0 chr5 48996898 48996937 -150633213 + (T)n Simple_repeat Simple_repeat 1 39 0 1139 249 186 35 chr5 48997098 48997519 -150632631 - L1MEc LINE L1 -3383 2832 2476 1694 35 0 10 chr5 48997519 48997722 -150632428 - AluY SINE Alu -1 310 110 1139 249 186 35 chr5 48997722 48997951 -150632199 - L1MEc LINE L1 -3739 2476 2283 189 0 0 0 chr5 48997951 48997972 -150632178 + (TG)n Simple_repeat Simple_repeat 2 22 0 1139 249 186 35 chr5 48997972 48998785 -150631365 - L1MEc LINE L1 -3932 2283 1169 573 246 101 42 chr5 48998794 48999082 -150631068 - L1MEc LINE L1 -5285 920 616 340 298 56 43 chr5 48999103 48999264 -150630886 - L2 LINE L2 -22 3291 3129 26 0 0 0 chr5 48999305 48999331 -150630819 + AT_rich Low_complexity Low_complexity 1 26 0 305 344 25 18 chr5 49001842 49002005 -150628145 - L1M4 LINE L1 -2157 3989 3826 354 261 116 43 chr5 49003288 49003426 -150626724 + MIR SINE MIR 6 153 -109 21 57 0 0 chr5 49003498 49003533 -150626617 + AT_rich Low_complexity Low_complexity 1 35 0 231 204 0 0 chr5 49003871 49003920 -150626230 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 11049 50 5 2 chr5 49003920 49006086 -150624064 - L1PA5 LINE L1 -9 6145 3977 191 237 184 0 chr5 49006225 49006301 -150623849 - MIR3 SINE MIR -5 203 114 2230 173 196 36 chr5 49006363 49006940 -150623210 - L1MA9 LINE L1 -22 6290 5622 393 249 133 23 chr5 49006938 49007111 -150623039 + L1 LINE L1 3373 3564 -2582 * 836 116 31 8 chr5 49008818 49008947 -150621203 - AluSq/x SINE Alu -180 132 1 2191 96 3 3 chr5 49014714 49015015 -150615135 + AluSp SINE Alu 2 302 -11 405 276 32 44 chr5 49016678 49017002 -150613148 + MLT1I LTR MaLR 1 395 -14 210 191 0 0 chr5 49017726 49017768 -150612382 + (TG)n Simple_repeat Simple_repeat 2 43 0 34 42 0 0 chr5 49019379 49019427 -150610723 + AT_rich Low_complexity Low_complexity 1 48 0 283 250 199 6 chr5 49019489 49019645 -150610505 + L1ME4a LINE L1 5933 6118 -3 344 283 116 56 chr5 49019766 49020017 -150610133 - L1ME4a LINE L1 -216 5905 5640 200 125 47 62 chr5 49020369 49020433 -150609717 + (CGGGA)n Simple_repeat Simple_repeat 5 67 0 225 56 19 74 chr5 49020454 49020508 -150609642 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 454 236 18 0 chr5 49020515 49020625 -150609525 + MER58C DNA MER1_type 104 215 0 317 125 18 0 chr5 49020889 49020945 -150609205 + (TA)n Simple_repeat Simple_repeat 1 57 0 2212 112 3 0 chr5 49020948 49021244 -150608906 - AluSq SINE Alu -16 297 1 9243 146 40 20 chr5 49021507 49022470 -150607680 - L1MA6 LINE L1 0 6300 5358 1995 135 3 10 chr5 49022470 49022781 -150607369 - AluSx SINE Alu -1 311 3 9243 146 40 20 chr5 49022781 49022805 -150607345 - L1MA6 LINE L1 -942 5358 5336 195 42 0 0 chr5 49022805 49022829 -150607321 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 9243 146 40 20 chr5 49022829 49023619 -150606531 - L1MA6 LINE L1 -964 5336 4563 5817 94 39 50 chr5 49023619 49025364 -150604786 - SVA Other Other -589 1386 28 9243 146 40 20 chr5 49025364 49026242 -150603908 - L1MA6 LINE L1 -1737 4563 3584 189 300 0 20 chr5 49026618 49026668 -150603482 - L2 LINE L2 -13 3300 3252 * 453 355 50 0 chr5 49026665 49026865 -150603285 + MIR SINE MIR 25 234 -28 579 275 90 28 chr5 49026883 49027094 -150603056 + MIR SINE MIR 37 260 -2 23 0 0 0 chr5 49027766 49027789 -150602361 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr5 49028441 49028477 -150601673 + AT_rich Low_complexity Low_complexity 1 36 0 180 309 0 0 chr5 49028684 49028726 -150601424 + L2 LINE L2 3255 3296 -17 387 141 0 0 chr5 49028961 49029025 -150601125 + (CA)n Simple_repeat Simple_repeat 1 64 0 710 272 190 32 chr5 49029042 49029518 -150600632 - MLT1G1 LTR MaLR 0 595 1 22 35 0 0 chr5 49029745 49029774 -150600376 + AT_rich Low_complexity Low_complexity 1 29 0 308 342 75 25 chr5 49030818 49031017 -150599133 - L1MEd LINE L1 -4969 1150 942 441 296 48 87 chr5 49031338 49031798 -150598352 + LTR16A1 LTR ERVL 12 453 -4 520 245 43 143 chr5 49032544 49032936 -150597214 - LTR33A LTR ERVL -3 520 168 444 219 142 35 chr5 49033005 49033174 -150596976 - LTR33A LTR ERVL -332 191 5 467 169 138 8 chr5 49034697 49034827 -150595323 - L1MC3 LINE L1 0 7785 7639 2499 293 86 35 chr5 49035624 49036147 -150594003 + L2 LINE L2 1472 1967 -1347 1751 183 0 10 chr5 49036147 49036453 -150593697 - AluJo SINE Alu -9 303 1 2499 293 86 35 chr5 49036453 49037074 -150593076 + L2 LINE L2 1967 2674 -640 379 313 216 19 chr5 49037088 49037459 -150592691 + L2 LINE L2 2823 3266 -47 285 279 0 15 chr5 49037558 49037694 -150592456 + (TA)n Simple_repeat Simple_repeat 2 135 0 238 152 61 45 chr5 49037694 49037760 -150592390 - L1MC4 LINE L1 -1339 6703 6637 271 147 35 56 chr5 49037967 49038110 -150592040 + (TATAA)n Simple_repeat Simple_repeat 5 144 0 319 246 201 0 chr5 49038575 49038709 -150591441 + LTR33 LTR ERVL 13 173 -348 23 33 0 0 chr5 49039008 49039038 -150591112 + AT_rich Low_complexity Low_complexity 1 30 0 217 293 53 0 chr5 49040698 49040773 -150589377 + MIR3 SINE MIR 124 202 -6 189 339 118 39 chr5 49040776 49040903 -150589247 - MIR3 SINE MIR -48 160 24 881 290 5 5 chr5 49041000 49041217 -150588933 - MIR SINE MIR -3 259 43 196 354 143 11 chr5 49042821 49042996 -150587154 + MIR SINE MIR 65 262 0 24 32 0 0 chr5 49043733 49043764 -150586386 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 49044292 49044313 -150585837 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr5 49046708 49046753 -150583397 + AT_rich Low_complexity Low_complexity 1 45 0 5496 204 91 44 chr5 49047605 49048196 -150581954 - L1MB5 LINE L1 -23 6649 6087 2447 74 0 6 chr5 49048196 49048508 -150581642 - AluY SINE Alu -1 310 1 5496 204 91 44 chr5 49048508 49049448 -150580702 - L1MB5 LINE L1 -585 6087 4980 1672 166 37 64 chr5 49049448 49049822 -150580328 + MLT1A1 LTR MaLR 2 365 0 5496 204 91 44 chr5 49049822 49050500 -150579650 - L1MB5 LINE L1 -1692 4980 4335 813 235 48 80 chr5 49050511 49050543 -150579607 - L1MB5 LINE L1 -2611 4033 4002 1997 154 0 7 chr5 49050543 49050842 -150579308 - AluJb SINE Alu -13 299 3 813 235 48 80 chr5 49050842 49050913 -150579237 - L1MB5 LINE L1 -2642 4002 3930 1950 96 59 0 chr5 49050913 49051185 -150578965 - AluSp SINE Alu -25 288 1 813 235 48 80 chr5 49051185 49051454 -150578696 - L1MB5 LINE L1 -2714 3930 3672 3845 245 108 36 chr5 49051486 49052105 -150578045 - L1MB5 LINE L1 -3579 3065 2492 1415 185 24 47 chr5 49052105 49052403 -150577747 - AluJo SINE Alu -21 291 1 3845 245 108 36 chr5 49052403 49054218 -150575932 - L1MB5 LINE L1 -4152 2492 192 3226 129 4 21 chr5 49054218 49054737 -150575413 + MER75 DNA T2_type 1 510 -4 3845 245 108 36 chr5 49054737 49054942 -150575208 - L1MB5 LINE L1 -6452 192 3 362 322 49 31 chr5 49055096 49055305 -150574845 - MIR SINE MIR -15 247 38 482 297 104 40 chr5 49055861 49056083 -150574067 - MIR SINE MIR -10 252 17 21 0 0 0 chr5 49056624 49056645 -150573505 + AT_rich Low_complexity Low_complexity 1 21 0 929 184 99 162 chr5 49057900 49058556 -150571594 - LTR34 LTR ERV1 -4 695 1 265 286 12 24 chr5 49059382 49059466 -150570684 - MIR SINE MIR -66 196 114 11549 35 2 0 chr5 49061386 49063551 -150566599 - L1PA6 LINE L1 -3 6151 3984 204 97 0 0 chr5 49063613 49063644 -150566506 + (CA)n Simple_repeat Simple_repeat 2 32 0 266 259 47 12 chr5 49066798 49066883 -150563267 + L1ME3 LINE L1 6075 6162 0 1694 167 10 19 chr5 49068009 49068321 -150561829 - AluSx SINE Alu -3 309 1 860 143 0 0 chr5 49068337 49068470 -150561680 - FLAM_C SINE Alu 0 133 1 301 333 101 13 chr5 49068581 49068740 -150561410 - MLT1J2 LTR MaLR -14 436 264 2298 93 0 13 chr5 49069219 49069532 -150560618 - AluSq SINE Alu 0 313 5 719 297 119 31 chr5 49070411 49070771 -150559379 + L2 LINE L2 2894 3285 -28 189 320 0 12 chr5 49073595 49073696 -150556454 + MIR SINE MIR 24 122 -86 365 242 94 20 chr5 49074065 49074214 -150555936 - MER67A LTR ERV1 0 543 384 356 289 24 54 chr5 49074367 49074533 -150555617 - MER67B LTR ERV1 -500 161 1 1487 150 54 77 chr5 49078393 49078706 -150551444 + AluSx SINE Alu 5 310 -2 23 0 0 0 chr5 49079961 49079984 -150550166 + AT_rich Low_complexity Low_complexity 1 23 0 241 301 0 14 chr5 49079990 49080063 -150550087 - L2 LINE L2 0 3313 3242 249 33 0 0 chr5 49080608 49080638 -150549512 + (TG)n Simple_repeat Simple_repeat 1 30 0 457 241 91 10 chr5 49080998 49081199 -150548951 - MLT1H1 LTR MaLR 0 590 338 232 239 0 0 chr5 49081185 49081231 -150548919 - MLT1J2 LTR MaLR -414 135 90 * 25 0 0 0 chr5 49082314 49082339 -150547811 + AT_rich Low_complexity Low_complexity 1 25 0 904 268 42 48 chr5 49082821 49083176 -150546974 - L2 LINE L2 -10 3303 2951 21 36 0 0 chr5 49084957 49084985 -150545165 + AT_rich Low_complexity Low_complexity 1 28 0 2052 128 20 0 chr5 49085050 49085354 -150544796 + AluSx SINE Alu 1 310 -2 324 306 91 21 chr5 49086127 49086313 -150543837 - LTR33 LTR ERVL 0 521 323 376 282 21 14 chr5 49086326 49086468 -150543682 - LTR33 LTR ERVL -378 143 1 477 137 0 14 chr5 49088794 49088867 -150541283 - FLAM SINE Alu -21 122 51 335 191 0 11 chr5 49089443 49089537 -150540613 + CT-rich Low_complexity Low_complexity 2 94 0 353 248 37 0 chr5 49090008 49090117 -150540033 + MER112 DNA MER1_type 148 260 0 24 53 0 0 chr5 49091931 49091969 -150538181 + AT_rich Low_complexity Low_complexity 1 38 0 26 64 0 0 chr5 49092771 49092818 -150537332 + AT_rich Low_complexity Low_complexity 1 47 0 23 33 0 0 chr5 49093152 49093182 -150536968 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 49095021 49095043 -150535107 + AT_rich Low_complexity Low_complexity 1 22 0 405 0 0 0 chr5 49098792 49098837 -150531313 + (TG)n Simple_repeat Simple_repeat 1 45 0 189 0 0 0 chr5 49098836 49098857 -150531293 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 230 355 50 40 chr5 49098982 49099283 -150530867 + L2 LINE L2 2224 2527 -787 441 227 119 87 chr5 49099555 49099890 -150530260 + L2 LINE L2 2615 2960 -354 194 297 127 17 chr5 49102660 49102778 -150527372 + L2 LINE L2 3182 3312 -1 250 310 51 63 chr5 49104477 49104732 -150525418 + L2 LINE L2 2804 3055 -217 223 308 96 19 chr5 49105076 49105180 -150524970 + L2 LINE L2 3155 3266 -6 237 234 43 53 chr5 49105787 49105881 -150524269 - L2 LINE L2 -32 3240 3148 531 344 27 11 chr5 49105915 49106101 -150524049 - MIR SINE MIR -28 234 46 560 268 81 89 chr5 49107009 49107513 -150522637 + LTR33A LTR ERVL 7 506 -17 213 250 0 0 chr5 49107519 49107559 -150522591 + L2 LINE L2 3237 3276 -37 2229 103 10 0 chr5 49107605 49107897 -150522253 - AluSx SINE Alu -17 295 1 5021 208 183 30 chr5 49109626 49111340 -150518810 - L1MDa LINE L1 -4556 1984 9 2312 75 0 0 chr5 49112470 49112751 -150517399 - AluY SINE Alu -10 301 21 275 0 29 0 chr5 49113898 49113933 -150516217 + (CA)n Simple_repeat Simple_repeat 2 37 0 230 277 46 15 chr5 49114501 49114566 -150515584 - MIR SINE MIR -106 102 36 207 273 0 0 chr5 49115338 49115393 -150514757 + T-rich Low_complexity Low_complexity 3 57 0 1632 198 45 58 chr5 49116445 49116975 -150513175 + Charlie1b DNA MER1_type 1 523 0 186 326 0 0 chr5 49118120 49118169 -150511981 - MIR SINE MIR -60 148 100 1839 162 93 31 chr5 49120352 49120392 -150509758 - MLT2D LTR ERVL 0 414 378 318 50 0 0 chr5 49120392 49120432 -150509718 + (TG)n Simple_repeat Simple_repeat 2 41 0 1839 162 93 31 chr5 49120432 49120779 -150509371 - MLT2D LTR ERVL -36 378 3 672 262 51 38 chr5 49122244 49122481 -150507669 - MIR SINE MIR -1 261 22 1427 237 51 13 chr5 49122996 49123389 -150506761 + MER119 DNA MER1_type 3 410 -173 1840 176 40 11 chr5 49123431 49123784 -150506366 - MLT1A1 LTR MaLR -2 363 1 858 320 78 48 chr5 49124092 49124911 -150505239 + L2 LINE L2 2434 3269 -44 24 0 0 0 chr5 49125086 49125110 -150505040 + AT_rich Low_complexity Low_complexity 1 24 0 7101 37 0 1 chr5 49125115 49126006 -150504144 - L1PA4 LINE L1 -12 6143 5254 21 36 0 0 chr5 49126590 49126618 -150503532 + AT_rich Low_complexity Low_complexity 1 28 0 2849 3 0 0 chr5 49127278 49127586 -150502564 - AluYa8 SINE Alu -2 308 1 1411 127 12 36 chr5 49129228 49129481 -150500669 + MER50 LTR ERV1 2 248 -486 * 1702 129 45 26 chr5 49129475 49129784 -150500366 + MER50 LTR ERV1 397 711 -23 2179 118 7 0 chr5 49130368 49130664 -150499486 + AluSq SINE Alu 3 300 -13 328 309 16 24 chr5 49130891 49131014 -150499136 + MIR3 SINE MIR 69 190 -18 327 238 259 0 chr5 49132376 49132523 -150497627 - MIR SINE MIR -49 213 29 276 339 0 48 chr5 49133441 49133545 -150496605 + MIR SINE MIR 54 154 -64 22 0 0 0 chr5 49133611 49133633 -150496517 + AT_rich Low_complexity Low_complexity 1 22 0 262 363 41 41 chr5 49133838 49134009 -150496141 + MIR SINE MIR 16 186 -76 2084 135 36 30 chr5 49134238 49134600 -150495550 + THE1B LTR MaLR 1 364 0 207 385 0 0 chr5 49135144 49135227 -150494923 + L2 LINE L2 3001 3083 -189 1545 185 0 21 chr5 49135287 49135608 -150494542 - AluJo SINE Alu 0 315 1 512 318 75 52 chr5 49135801 49136404 -150493746 - L2 LINE L2 -7 3306 2689 982 150 87 71 chr5 49138243 49138497 -150491653 - L1MA10 LINE L1 -36 6298 6041 * 1026 303 36 26 chr5 49138495 49139152 -150490998 - HAL1 LINE L1 -849 1658 995 252 103 39 77 chr5 49139129 49139207 -150490943 + L1MA10 LINE L1 6260 6334 0 * 1414 135 30 0 chr5 49139223 49139460 -150490690 - Tigger2 DNA MER2_type -10 2708 2465 4063 143 19 21 chr5 49139536 49140283 -150489867 - Tigger2 DNA MER2_type -1973 745 1 1696 212 110 40 chr5 49140347 49140927 -150489223 - L1MB1 LINE L1 -816 5330 4710 * 2720 164 19 11 chr5 49140926 49140964 -150489186 + L1MB1 LINE L1 5321 5357 -811 1861 174 27 21 chr5 49140964 49141337 -150488813 - THE1C LTR MaLR 0 375 1 2720 164 19 11 chr5 49141337 49141833 -150488317 + L1MB1 LINE L1 5357 5859 -309 355 214 9 18 chr5 49141835 49141947 -150488203 + CT-rich Low_complexity Low_complexity 4 114 0 1554 224 0 6 chr5 49141947 49142260 -150487890 - AluJo SINE Alu -1 311 1 1494 155 73 16 chr5 49142263 49142566 -150487584 + L1MB1 LINE L1 5845 6164 -4 296 340 11 0 chr5 49144037 49144131 -150486019 + MIR3 SINE MIR 76 170 -38 2431 81 3 0 chr5 49144317 49144613 -150485537 + AluSc SINE Alu 1 297 -12 342 326 85 13 chr5 49144762 49144986 -150485164 - MIR SINE MIR -21 241 2 1600 193 30 27 chr5 49145052 49145420 -150484730 + MLT1A2 LTR MaLR 4 372 -2 306 0 0 0 chr5 49145478 49145512 -150484638 + (A)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr5 49145625 49145647 -150484503 + AT_rich Low_complexity Low_complexity 1 22 0 558 167 28 0 chr5 49145872 49145980 -150484170 + MLT1C LTR MaLR 1 111 -356 207 69 0 0 chr5 49147351 49147380 -150482770 + (TTC)n Simple_repeat Simple_repeat 2 30 0 1648 187 29 4 chr5 49147435 49147713 -150482437 - AluJo SINE Alu -19 293 9 304 280 32 72 chr5 49147762 49147887 -150482263 - L1MB8 LINE L1 -127 6046 5920 267 189 278 11 chr5 49147887 49147977 -150482173 + MER34 LTR ERV1 1 114 -428 * 1178 219 56 61 chr5 49147946 49148407 -150481743 + MER39 LTR ERV1 243 701 -6 689 202 46 12 chr5 49148412 49148585 -150481565 - L1ME1 LINE L1 -243 5923 5745 936 256 16 16 chr5 49148593 49148843 -150481307 + MLT1E1 LTR MaLR 389 638 -16 483 323 78 51 chr5 49148906 49149340 -150480810 - L2 LINE L2 -351 2963 2518 195 318 254 4 chr5 49149798 49150050 -150480100 - L2 LINE L2 -1302 2012 1698 1784 158 106 35 chr5 49151334 49151543 -150478607 - L1MB7 LINE L1 -59 6125 5932 2058 111 93 35 chr5 49151543 49151887 -150478263 + THE1B LTR MaLR 1 364 0 1784 158 106 35 chr5 49151887 49152132 -150478018 - L1MB7 LINE L1 -252 5932 5639 1930 191 115 11 chr5 49152255 49152717 -150477433 - MLT2B1 LTR ERVL -10 510 1 22 56 0 0 chr5 49152950 49152986 -150477164 + AT_rich Low_complexity Low_complexity 1 36 0 714 311 31 4 chr5 49153044 49153269 -150476881 + MIR SINE MIR 19 249 -13 27 92 0 0 chr5 49155031 49155107 -150475043 + AT_rich Low_complexity Low_complexity 1 76 0 201 39 0 0 chr5 49155151 49155177 -150474973 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 274 361 0 0 chr5 49155178 49155250 -150474900 - L2 LINE L2 -15 3257 3186 2465 269 95 77 chr5 49155254 49155333 -150474817 - L2 LINE L2 -12 3301 3225 2358 85 0 0 chr5 49155333 49155640 -150474510 + AluY SINE Alu 3 309 -2 2465 269 95 77 chr5 49155640 49155779 -150474371 - L2 LINE L2 -88 3225 3090 261 0 0 0 chr5 49155779 49155808 -150474342 + (TG)n Simple_repeat Simple_repeat 1 29 0 2465 269 95 77 chr5 49155808 49157114 -150473036 - L2 LINE L2 -223 3090 1747 189 0 0 0 chr5 49157114 49157135 -150473015 + (GAAAA)n Simple_repeat Simple_repeat 3 23 0 2465 269 95 77 chr5 49157135 49157168 -150472982 - L2 LINE L2 -1566 1747 1716 1409 216 46 39 chr5 49157724 49157841 -150472309 + MLT1C LTR MaLR 1 116 -351 2372 70 0 13 chr5 49157841 49158142 -150472008 + AluSc SINE Alu 1 297 -12 1409 216 46 39 chr5 49158142 49158437 -150471713 + MLT1C LTR MaLR 116 416 -51 355 112 0 33 chr5 49158493 49158553 -150471597 + MLT1C LTR MaLR 308 467 0 23 33 0 0 chr5 49158689 49158719 -150471431 + AT_rich Low_complexity Low_complexity 1 30 0 207 337 50 20 chr5 49158736 49158837 -150471313 - MIR SINE MIR -55 207 104 1678 130 89 43 chr5 49159572 49159653 -150470497 + MER1B DNA MER1_type 1 77 -2635 2057 87 31 107 chr5 49159653 49160045 -150470105 + THE1B LTR MaLR 1 362 -2 1678 130 89 43 chr5 49160045 49160287 -150469863 + MER1B DNA MER1_type 77 339 0 296 339 24 16 chr5 49160881 49161005 -150469145 + MIR SINE MIR 6 130 -132 1346 101 6 0 chr5 49161103 49161282 -150468868 - AluSg/x SINE Alu -4 306 127 301 114 0 0 chr5 49161293 49161337 -150468813 - Alu SINE Alu -259 44 1 816 257 11 0 chr5 49161347 49161530 -150468620 + MIR SINE MIR 78 262 0 21 36 0 0 chr5 49161562 49161590 -150468560 + AT_rich Low_complexity Low_complexity 1 28 0 2078 184 18 55 chr5 49162452 49162892 -150467258 + MSTB LTR MaLR 3 426 0 1105 129 0 0 chr5 49163373 49163544 -150466606 - Tigger1 DNA MER2_type -305 2113 1943 1621 188 3 3 chr5 49163891 49164203 -150465947 - AluJb SINE Alu 0 314 3 1743 225 73 64 chr5 49164215 49164267 -150465883 + L1ME2 LINE L1 4982 5032 -1132 2274 115 0 0 chr5 49164267 49164572 -150465578 + AluSg SINE Alu 1 305 -5 1743 225 73 64 chr5 49164572 49165016 -150465134 + L1ME2 LINE L1 5032 5471 -693 14084 142 25 10 chr5 49165016 49167396 -150462754 - Tigger1 DNA MER2_type 0 2418 2 1743 225 73 64 chr5 49167396 49167467 -150462683 + L1ME2 LINE L1 5471 5540 -624 2190 113 0 0 chr5 49167467 49167768 -150462382 + AluSc SINE Alu 1 301 -8 1743 225 73 64 chr5 49167768 49168406 -150461744 + L1ME2 LINE L1 5540 6155 -9 209 382 53 27 chr5 49168431 49168656 -150461494 - MIR SINE MIR -12 250 20 2438 97 6 0 chr5 49169410 49169721 -150460429 + AluSq SINE Alu 1 313 0 2114 131 0 13 chr5 49169850 49170163 -150459987 - AluSg1 SINE Alu 0 309 1 2061 122 10 0 chr5 49170193 49170496 -150459654 + AluSq SINE Alu 1 306 -7 181 243 75 47 chr5 49171596 49171703 -150458447 - L2 LINE L2 -157 3115 3006 300 302 151 73 chr5 49172123 49172467 -150457683 + L1MDb LINE L1 396 766 -5643 240 244 33 11 chr5 49173146 49173236 -150456914 + MER81 DNA DNA 2 93 -21 33 0 0 0 chr5 49174167 49174200 -150455950 + AT_rich Low_complexity Low_complexity 1 33 0 8598 189 40 25 chr5 49174411 49176057 -150454093 + L1MA9 LINE L1 2856 4545 -1601 2447 127 19 28 chr5 49176057 49176481 -150453669 + L1MA2 LINE L1 5885 6304 0 8598 189 40 25 chr5 49176481 49177019 -150453131 + L1MA9 LINE L1 4545 5073 -1073 288 0 0 0 chr5 49177025 49177057 -150453093 + (A)n Simple_repeat Simple_repeat 1 32 0 4920 163 53 4 chr5 49177059 49178264 -150451886 + L1MA9 LINE L1 5042 6302 -10 774 165 0 0 chr5 49180507 49180640 -150449510 + FLAM_C SINE Alu 1 133 0 203 175 0 0 chr5 49180750 49180790 -150449360 + T-rich Low_complexity Low_complexity 2 41 0 939 364 101 15 chr5 49180840 49181621 -150448529 - L2 LINE L2 -585 2729 1882 248 290 0 0 chr5 49181623 49181692 -150448458 + L3 LINE CR1 1495 1563 -14 416 345 42 12 chr5 49183594 49183762 -150446388 + MIR SINE MIR 4 176 -86 1704 160 34 7 chr5 49184510 49184779 -150445371 + AluJb SINE Alu 1 276 -36 1779 176 79 5 chr5 49184805 49185185 -150444965 - MSTB1 LTR MaLR -24 408 1 24 53 0 0 chr5 49186806 49186844 -150443306 + AT_rich Low_complexity Low_complexity 1 38 0 1451 168 139 9 chr5 49186869 49187185 -150442965 - MSTD LTR MaLR 0 396 40 2402 152 21 21 chr5 49187185 49187607 -150442543 + MSTB LTR MaLR 1 422 -4 1015 185 0 0 chr5 49187611 49187806 -150442344 + MSTB-int LTR MaLR 1 195 -1456 7827 198 10 20 chr5 49187823 49190111 -150440039 + L1PB2 LINE L1 3 1644 -5219 12499 178 17 10 chr5 49190115 49191697 -150438453 + L1PB2 LINE L1 3095 4666 -2201 1756 122 76 62 chr5 49191697 49192066 -150438084 + THE1C LTR MaLR 1 374 -1 12499 178 17 10 chr5 49192066 49192968 -150437182 + L1PB2 LINE L1 4666 5561 -1306 1829 123 32 42 chr5 49192968 49193277 -150436873 + AluSq SINE Alu 1 306 0 12499 178 17 10 chr5 49193277 49194533 -150435617 + L1PB2 LINE L1 5561 6864 -3 6782 174 30 55 chr5 49194551 49196041 -150434109 + MSTB-int LTR MaLR 187 1638 -13 2192 171 29 12 chr5 49196056 49196470 -150433680 + MSTB LTR MaLR 6 426 0 230 200 0 0 chr5 49196470 49196514 -150433636 - MSTD LTR MaLR -352 44 1 2834 16 0 0 chr5 49196553 49196864 -150433286 + AluYb8 SINE Alu 1 311 -7 216 338 62 0 chr5 49198603 49198683 -150431467 + MER91C DNA MER1_type 26 110 -30 1874 217 46 63 chr5 49199666 49200269 -150429881 - MER7C DNA MER2_type -2 600 8 282 323 113 40 chr5 49200542 49200790 -150429360 + L2 LINE L2 3048 3313 0 389 230 44 44 chr5 49201965 49202100 -150428050 - MLT1J LTR MaLR -48 463 329 273 306 70 54 chr5 49202311 49202497 -150427653 - MLT1J LTR MaLR -212 299 111 1835 191 111 40 chr5 49202686 49203229 -150426921 - MLT1G LTR MaLR -7 583 3 206 77 0 0 chr5 49203261 49203287 -150426863 + (TTCTC)n Simple_repeat Simple_repeat 5 30 0 660 124 0 0 chr5 49203287 49203392 -150426758 + (TCCCC)n Simple_repeat Simple_repeat 1 105 0 431 157 88 20 chr5 49203394 49203496 -150426654 - FRAM SINE Alu -13 163 55 1602 84 56 0 chr5 49203566 49203780 -150426370 + L1PA11 LINE L1 5949 6174 0 2296 136 67 122 chr5 49204122 49204459 -150425691 + MER4B LTR ERV1 1 355 -255 324 0 0 0 chr5 49204459 49204495 -150425655 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 1899 88 72 0 chr5 49204495 49204757 -150425393 - AluSc SINE Alu -28 281 1 2296 136 67 122 chr5 49204757 49205035 -150425115 + MER4B LTR ERV1 353 583 -27 369 271 45 38 chr5 49205572 49205705 -150424445 + MIR SINE MIR 57 190 -72 416 262 52 133 chr5 49205940 49206264 -150423886 - L2 LINE L2 -36 3277 2980 858 287 13 4 chr5 49206266 49206496 -150423654 - MIR SINE MIR -29 233 2 195 42 0 0 chr5 49206611 49206635 -150423515 + (TG)n Simple_repeat Simple_repeat 2 25 0 1673 195 0 3 chr5 49206648 49206946 -150423204 - AluJo SINE Alu -5 307 11 2100 95 11 3 chr5 49210261 49210591 -150419559 - AluSq SINE Alu 0 360 29 331 277 21 11 chr5 49213077 49213171 -150416979 - MIR3 SINE MIR -45 163 69 2172 118 7 0 chr5 49213398 49213694 -150416456 - AluSq SINE Alu -13 300 3 1844 129 45 26 chr5 49214278 49214587 -150415563 - MER50 LTR ERV1 -23 711 397 1520 127 12 36 chr5 49214581 49214834 -150415316 - MER50 LTR ERV1 -486 248 2 * 2746 32 0 0 chr5 49216477 49216788 -150413362 + AluYb8 SINE Alu 1 311 -7 213 338 62 0 chr5 49218527 49218607 -150411543 - MER91C DNA MER1_type -25 115 31 2138 218 46 62 chr5 49219588 49220198 -150409952 - MER7C DNA MER2_type -2 600 1 244 327 113 40 chr5 49220464 49220712 -150409438 + L2 LINE L2 3048 3313 0 441 230 44 44 chr5 49221887 49222022 -150408128 - MLT1J LTR MaLR -48 463 329 330 285 75 59 chr5 49222233 49222419 -150407731 - MLT1J LTR MaLR -212 299 111 1835 191 111 40 chr5 49222623 49223166 -150406984 - MLT1G LTR MaLR -7 583 3 515 121 0 11 chr5 49223235 49223326 -150406824 + (TCCCC)n Simple_repeat Simple_repeat 1 90 0 431 157 88 20 chr5 49223328 49223430 -150406720 - FRAM SINE Alu -13 163 55 1617 84 56 0 chr5 49223500 49223714 -150406436 + L1PA11 LINE L1 5949 6174 0 2329 134 63 123 chr5 49224056 49224396 -150405754 + MER4B LTR ERV1 1 360 -250 270 0 0 0 chr5 49224396 49224426 -150405724 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1899 88 72 0 chr5 49224426 49224688 -150405462 - AluSc SINE Alu -28 281 1 2329 134 63 123 chr5 49224688 49224966 -150405184 + MER4B LTR ERV1 358 583 -27 369 271 45 38 chr5 49225504 49225637 -150404513 + MIR SINE MIR 57 190 -72 402 265 52 133 chr5 49225872 49226196 -150403954 - L2 LINE L2 -36 3277 2980 858 287 13 4 chr5 49226198 49226428 -150403722 - MIR SINE MIR -29 233 2 195 42 0 0 chr5 49226543 49226567 -150403583 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 210 37 0 0 chr5 49226566 49226593 -150403557 + (TA)n Simple_repeat Simple_repeat 2 28 0 1575 192 0 10 chr5 49226593 49226884 -150403266 - AluJo SINE Alu -14 298 11 204 118 29 0 chr5 49230200 49230234 -150399916 + CT-rich Low_complexity Low_complexity 2 36 0 2033 106 11 3 chr5 49230234 49230517 -150399633 - AluSq SINE Alu 0 313 29 406 70 18 0 chr5 49231610 49231667 -150398483 - AluSp/q SINE Alu -15 298 241 246 327 18 0 chr5 49232034 49232143 -150398007 - MIR3 SINE MIR -23 185 74 24 32 0 0 chr5 49232208 49232239 -150397911 + AT_rich Low_complexity Low_complexity 1 31 0 504 0 0 0 chr5 49232603 49232659 -150397491 + (TG)n Simple_repeat Simple_repeat 2 57 0 207 139 0 0 chr5 49234190 49234226 -150395924 + (CA)n Simple_repeat Simple_repeat 2 37 0 216 261 0 0 chr5 49234918 49234987 -150395163 + A-rich Low_complexity Low_complexity 1 69 0 432 0 0 0 chr5 49236088 49236157 -150393993 + (TG)n Simple_repeat Simple_repeat 1 117 0 432 0 0 0 chr5 49236157 49236205 -150393945 + (TG)n Simple_repeat Simple_repeat 2 49 0 267 295 0 13 chr5 49237270 49237348 -150392802 + CT-rich Low_complexity Low_complexity 2 78 0 226 71 24 24 chr5 49238251 49238293 -150391857 + (CA)n Simple_repeat Simple_repeat 2 43 0 249 152 0 0 chr5 49241665 49241711 -150388439 + LTR66 LTR ERVL 394 439 -171 2233 95 0 3 chr5 49241821 49242153 -150387997 + AluSq SINE Alu 1 331 0 1833 129 32 0 chr5 49242374 49242538 -150387612 - AluSq SINE Alu -25 288 110 237 65 0 0 chr5 49242538 49242569 -150387581 + (TTTAG)n Simple_repeat Simple_repeat 5 35 0 1833 129 32 0 chr5 49242569 49242683 -150387467 - AluSq SINE Alu -203 110 1 361 188 38 0 chr5 49243126 49243206 -150386944 + MIR SINE MIR 153 235 -27 1677 189 22 31 chr5 49244479 49244834 -150385316 - MLT1A1 LTR MaLR 0 365 14 219 139 0 0 chr5 49244839 49244875 -150385275 + (TG)n Simple_repeat Simple_repeat 1 36 0 301 253 0 55 chr5 49245130 49245221 -150384929 - HAL1 LINE L1 -1465 1042 957 2445 198 79 13 chr5 49245726 49246247 -150383903 + MER119 DNA MER1_type 29 583 0 369 43 0 0 chr5 49246690 49246737 -150383413 + (CA)n Simple_repeat Simple_repeat 2 48 0 432 286 40 16 chr5 49248593 49248719 -150381431 - MIR SINE MIR -64 144 16 542 231 39 8 chr5 49250834 49250964 -150379186 - MIR SINE MIR -20 242 109 3336 111 126 0 chr5 49251207 49251675 -150378475 + MER1A DNA MER1_type 1 527 0 1282 148 74 40 chr5 49251830 49252199 -150377951 + MLT1C LTR MaLR 21 390 0 285 430 49 0 chr5 49252991 49253133 -150377017 - L2 LINE L2 -37 3235 3087 275 322 58 16 chr5 49253515 49253636 -150376514 - L2 LINE L2 -10 3303 3178 21 0 0 0 chr5 49255941 49255962 -150374188 + AT_rich Low_complexity Low_complexity 1 21 0 1892 200 104 40 chr5 49256191 49256720 -150373430 + MLT1F1 LTR MaLR 1 563 -4 1977 148 3 0 chr5 49256902 49257213 -150372937 + AluSx SINE Alu 1 312 0 273 250 28 14 chr5 49257882 49257954 -150372196 + CT-rich Low_complexity Low_complexity 3 75 0 2331 183 83 53 chr5 49259201 49259801 -150370349 + MLT1E3 LTR MaLR 6 623 -1 741 125 44 0 chr5 49261623 49261759 -150368391 - L1MA3 LINE L1 0 6305 6164 249 119 0 0 chr5 49262344 49262386 -150367764 + (CA)n Simple_repeat Simple_repeat 1 42 0 398 261 122 6 chr5 49263012 49263192 -150366958 - LTR33A LTR ERVL 0 523 323 1801 176 34 3 chr5 49263324 49263647 -150366503 + MSTB LTR MaLR 1 333 -93 191 329 82 43 chr5 49263773 49263980 -150366170 + L2 LINE L2 1495 1709 -1605 424 307 235 0 chr5 49264324 49264477 -150365673 + MER5A DNA MER1_type 1 189 0 181 356 75 21 chr5 49265346 49265585 -150364565 + L2 LINE L2 1942 2193 -1121 1038 175 0 0 chr5 49266101 49266267 -150363883 - FRAM SINE Alu -13 163 1 422 363 131 29 chr5 49266338 49266652 -150363498 + L2 LINE L2 2927 3272 0 258 111 0 0 chr5 49267390 49267426 -150362724 - U2 snRNA snRNA -152 36 1 357 241 0 12 chr5 49268121 49268204 -150361946 - MIR SINE MIR -108 154 73 516 291 109 9 chr5 49268267 49268487 -150361663 + MIR SINE MIR 20 261 -1 267 31 0 0 chr5 49268566 49268598 -150361552 + (TA)n Simple_repeat Simple_repeat 2 33 0 285 118 0 0 chr5 49269015 49269066 -150361084 + (TG)n Simple_repeat Simple_repeat 1 51 0 1417 196 12 4 chr5 49269068 49269323 -150360827 - AluJb SINE Alu -23 289 33 29 60 0 0 chr5 49269326 49269376 -150360774 + AT_rich Low_complexity Low_complexity 1 50 0 210 118 0 0 chr5 49271699 49271733 -150358417 + (TC)n Simple_repeat Simple_repeat 2 35 0 24 0 0 0 chr5 49272540 49272564 -150357586 + AT_rich Low_complexity Low_complexity 1 24 0 608 276 51 19 chr5 49273172 49273198 -150356952 + L1PA16 LINE L1 5745 5769 -397 2084 112 3 14 chr5 49273198 49273518 -150356632 - AluSx SINE Alu 0 312 1 493 155 10 10 chr5 49273523 49273626 -150356524 - L1MA7 LINE L1 -5 6286 6184 2189 126 13 39 chr5 49273626 49274008 -150356142 + L1MA7 LINE L1 5779 6150 -141 386 246 40 146 chr5 49274444 49274643 -150355507 - MER5B DNA MER1_type 0 178 1 395 269 181 19 chr5 49274653 49274813 -150355337 + MER5A DNA MER1_type 4 189 0 1362 164 35 12 chr5 49275492 49275815 -150354335 + MER33 DNA MER1_type 1 318 -6 297 157 39 0 chr5 49276185 49276236 -150353914 - L2 LINE L2 -11 3302 3250 360 200 105 140 chr5 49277157 49277357 -150352793 - MER112 DNA MER1_type -59 201 9 1101 109 31 57 chr5 49277477 49277706 -150352444 - L1MA2 LINE L1 0 6304 6082 2082 108 10 3 chr5 49277998 49278304 -150351846 + AluSg SINE Alu 1 308 -2 1408 183 10 35 chr5 49281152 49281442 -150348708 - AluJb SINE Alu -4 308 26 841 195 23 17 chr5 49282087 49282261 -150347889 - MER5A DNA MER1_type -6 183 9 235 259 0 0 chr5 49283515 49283569 -150346581 + (TA)n Simple_repeat Simple_repeat 2 55 0 22 35 0 0 chr5 49284141 49284170 -150345980 + AT_rich Low_complexity Low_complexity 1 29 0 1269 124 101 0 chr5 49284412 49284621 -150345529 - MER30 DNA MER1_type 0 230 1 330 319 0 0 chr5 49284781 49284872 -150345278 - L1MC4 LINE L1 -1339 6703 6613 264 224 0 0 chr5 49284874 49284941 -150345209 + (TA)n Simple_repeat Simple_repeat 2 68 0 398 116 21 21 chr5 49284977 49285072 -150345078 + (TA)n Simple_repeat Simple_repeat 2 96 0 1385 82 13 69 chr5 49285743 49285976 -150344174 + L1MA2 LINE L1 6085 6304 0 397 297 39 14 chr5 49286502 49286723 -150343427 + MLT1K LTR MaLR 3 298 -290 336 290 28 15 chr5 49288130 49288291 -150341859 + MER5A DNA MER1_type 7 170 -8 212 234 0 0 chr5 49288457 49288504 -150341646 + MIR SINE MIR 97 143 -119 1570 228 234 3 chr5 49289896 49290545 -150339605 + L2 LINE L2 1574 2372 -942 2028 165 61 61 chr5 49290574 49291052 -150339098 + LTR54 LTR ERV1 1 478 -32 1231 286 98 9 chr5 49291113 49291540 -150338610 + L2 LINE L2 2409 2873 -441 250 339 142 0 chr5 49293416 49293543 -150336607 - MIR SINE MIR -1 261 117 523 310 83 79 chr5 49294180 49294713 -150335437 + L1MEd LINE L1 535 1069 -5050 26 30 0 0 chr5 49294914 49294947 -150335203 + AT_rich Low_complexity Low_complexity 1 33 0 714 239 0 2 chr5 49295218 49295398 -150334752 - L1P LINE L1 -989 5157 4980 3085 146 18 62 chr5 49295398 49296013 -150334137 + L1PB4 LINE L1 5567 6154 -2 714 239 0 2 chr5 49296013 49296031 -150334119 - L1P LINE L1 -1166 4980 4963 240 250 0 16 chr5 49296356 49296420 -150333730 + (TA)n Simple_repeat Simple_repeat 1 63 0 30 77 0 0 chr5 49296484 49296549 -150333601 + AT_rich Low_complexity Low_complexity 1 65 0 742 171 23 0 chr5 49296730 49296859 -150333291 + MER20 DNA MER1_type 87 218 -1 273 237 176 38 chr5 49298544 49298675 -150331475 - L1MC/D LINE L1 -1984 5824 5676 32 0 0 0 chr5 49298945 49298977 -150331173 + AT_rich Low_complexity Low_complexity 1 32 0 180 77 0 0 chr5 49298977 49299003 -150331147 + (CATATA)n Simple_repeat Simple_repeat 2 27 0 201 245 29 29 chr5 49299177 49299244 -150330906 + (TATATG)n Simple_repeat Simple_repeat 1 70 -32 1738 156 126 3 chr5 49299244 49299570 -150330580 - MER47A DNA MER2_type 0 366 1 201 245 29 29 chr5 49299570 49299604 -150330546 + (TATATG)n Simple_repeat Simple_repeat 69 102 0 391 131 83 24 chr5 49299778 49299862 -150330288 + MER5A DNA MER1_type 94 182 -7 391 314 50 6 chr5 49299898 49300057 -150330093 - MER5B DNA MER1_type 0 178 13 406 289 137 15 chr5 49300170 49300367 -150329783 + MIR SINE MIR 32 252 -10 237 191 64 91 chr5 49302351 49302461 -150327689 + L1MC4 LINE L1 7864 7970 -72 29 0 0 0 chr5 49303969 49303998 -150326152 + AT_rich Low_complexity Low_complexity 1 29 0 1407 98 24 0 chr5 49303998 49304203 -150325947 - L1PA10 LINE L1 0 6168 5959 369 335 108 21 chr5 49304742 49304936 -150325214 - L2 LINE L2 -4 3268 3058 879 90 14 14 chr5 49305042 49305187 -150324963 - L1PA8A LINE L1 -102 6029 5885 410 281 0 0 chr5 49305301 49305401 -150324749 - MLT1I LTR MaLR -231 178 79 290 298 35 7 chr5 49305514 49305655 -150324495 - HAL1 LINE L1 -860 1647 1503 847 252 24 0 chr5 49305814 49306020 -150324130 - MER58A DNA MER1_type -13 211 1 268 253 35 53 chr5 49306038 49306208 -150323942 - L1MEd LINE L1 -4910 1209 1043 497 220 28 0 chr5 49306270 49306379 -150323771 - MER81 DNA DNA -2 112 1 301 207 0 0 chr5 49306967 49307025 -150323125 - MER20 DNA MER1_type -61 158 101 560 200 12 97 chr5 49307044 49307209 -150322941 - MER20 DNA MER1_type -68 151 1 360 111 0 56 chr5 49307748 49307820 -150322330 + L1 LINE L1 3990 4057 -2089 1602 126 3 21 chr5 49307820 49308104 -150322046 + L1MA5A LINE L1 6018 6297 0 3712 235 148 11 chr5 49308119 49310001 -150320149 + L1ME1 LINE L1 2171 4298 -1917 906 183 88 88 chr5 49310001 49310329 -150319821 + L1ME1 LINE L1 5580 5907 -328 443 98 24 49 chr5 49310499 49310581 -150319569 + L1PA10 LINE L1 6085 6164 -4 1196 243 58 25 chr5 49310754 49311154 -150318996 - MLT1C LTR MaLR 0 467 55 21 0 0 0 chr5 49311713 49311734 -150318416 + AT_rich Low_complexity Low_complexity 1 21 0 4209 138 21 11 chr5 49311766 49312040 -150318110 - L1MB3 LINE L1 -2 6181 5911 2198 116 0 3 chr5 49312040 49312333 -150317817 - AluSx SINE Alu -20 292 1 4209 138 21 11 chr5 49312333 49312803 -150317347 - L1MB3 LINE L1 -272 5911 5429 274 0 73 0 chr5 49314135 49314176 -150315974 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 441 210 10 0 chr5 49314388 49314488 -150315662 - L1MA8 LINE L1 -201 6090 5990 256 279 95 58 chr5 49315399 49315589 -150314561 + L2 LINE L2 3117 3313 0 464 313 145 32 chr5 49316175 49316610 -150313540 + L1ME4a LINE L1 5579 6062 -59 1384 192 48 34 chr5 49316613 49316905 -150313245 - AluJo SINE Alu -3 309 14 2259 98 7 0 chr5 49316954 49317251 -150312899 - AluSq SINE Alu -14 299 1 2354 93 0 6 chr5 49317424 49317735 -150312415 - AluY SINE Alu -2 309 1 2364 57 40 3 chr5 49319237 49319537 -150310613 + AluY SINE Alu 1 311 0 624 239 0 0 chr5 49319998 49320115 -150310035 - FLAM_A SINE Alu -16 117 1 2244 87 7 10 chr5 49321216 49321514 -150308636 + AluSx SINE Alu 1 297 -15 235 71 48 0 chr5 49321778 49321820 -150308330 + (TG)n Simple_repeat Simple_repeat 1 44 0 2968 250 72 41 chr5 49422451 49423112 -150207038 + L1ME3A LINE L1 1005 1644 -4571 1602 139 101 35 chr5 49423112 49423428 -150206722 + MER44D DNA MER2_type 3 609 0 2968 250 72 41 chr5 49423428 49424527 -150205623 + L1ME3A LINE L1 1644 2788 -3427 479 277 77 24 chr5 49425476 49425749 -150204401 + L1ME3A LINE L1 5518 5808 -445 30 27 0 0 chr5 49425835 49425872 -150204278 + AT_rich Low_complexity Low_complexity 1 37 0 2044 104 11 0 chr5 49425927 49426239 -150203911 + AluSp SINE Alu 1 315 0 575 284 75 55 chr5 49426246 49426912 -150203238 + L1MB3 LINE L1 1041 1876 -4659 344 248 130 29 chr5 49427225 49427463 -150202687 + L1MB3 LINE L1 2526 2787 -3595 1366 268 109 19 chr5 49427593 49428433 -150201717 + L1MB3 LINE L1 5223 6164 -255 645 203 40 0 chr5 49428346 49428494 -150201656 + L1ME3A LINE L1 6077 6230 -176 * 273 241 0 17 chr5 49428915 49428973 -150201177 + L2 LINE L2 3201 3257 -15 25 0 0 0 chr5 49429770 49429795 -150200355 + AT_rich Low_complexity Low_complexity 1 25 0 320 302 86 0 chr5 49430360 49430476 -150199674 + L2 LINE L2 3170 3295 -18 948 201 0 0 chr5 49431209 49431383 -150198767 - FRAM SINE Alu -3 173 1 230 291 77 41 chr5 49432120 49432208 -150197942 - MIR SINE MIR -66 142 54 517 285 75 20 chr5 49433631 49433831 -150196319 - MIR SINE MIR -5 257 47 1834 162 41 33 chr5 49434123 49434487 -150195663 - THE1C LTR MaLR 0 375 9 893 186 107 11 chr5 49435038 49435215 -150194935 - MER20 DNA MER1_type -2 217 24 1290 266 53 39 chr5 49435358 49436002 -150194148 + L1MC4 LINE L1 6995 7647 -395 482 154 0 89 chr5 49436137 49436260 -150193890 + L1PA11 LINE L1 6063 6174 0 247 125 0 54 chr5 49436277 49436333 -150193817 + (TAAAA)n Simple_repeat Simple_repeat 2 54 0 366 339 75 23 chr5 49438214 49438388 -150191762 - MIR3 SINE MIR -17 191 9 1917 192 30 5 chr5 49438720 49439147 -150191003 - L1MB4 LINE L1 -1 6179 5742 658 243 28 0 chr5 49439403 49439547 -150190603 + FAM SINE Alu 21 168 -17 199 230 81 27 chr5 49440487 49440561 -150189589 - L3 LINE CR1 -4 1573 1496 182 275 50 25 chr5 49441812 49441892 -150188258 + MIR SINE MIR 105 186 -76 * 220 294 29 40 chr5 49441861 49441977 -150188173 + MIR SINE MIR 75 196 -12 2189 306 29 11 chr5 49442016 49442104 -150188046 + L1MEc LINE L1 46 131 -6265 207 0 0 0 chr5 49442104 49442127 -150188023 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2189 306 29 11 chr5 49442127 49442840 -150187310 + L1MEc LINE L1 131 861 -5535 22 35 0 0 chr5 49443389 49443418 -150186732 + AT_rich Low_complexity Low_complexity 1 29 0 658 240 110 49 chr5 49445126 49445544 -150184606 + L1ME4a LINE L1 5672 6121 0 246 309 87 32 chr5 49445996 49446122 -150184028 - L2 LINE L2 -1 3312 3180 327 354 0 16 chr5 49446928 49447055 -150183095 + CT-rich Low_complexity Low_complexity 2 126 0 237 246 0 0 chr5 49447782 49447847 -150182303 + (TA)n Simple_repeat Simple_repeat 2 66 0 2241 119 14 8 chr5 49447851 49448204 -150181946 + THE1A LTR MaLR 1 355 0 22 0 0 0 chr5 49448244 49448266 -150181884 + AT_rich Low_complexity Low_complexity 1 22 0 843 213 42 28 chr5 49448498 49448714 -150181436 - MER20 DNA MER1_type 0 219 1 842 182 0 6 chr5 49449197 49449362 -150180788 + L1PA15 LINE L1 6002 6165 0 24 61 0 0 chr5 49451107 49451140 -150179010 + AT_rich Low_complexity Low_complexity 1 33 0 289 286 124 22 chr5 49451610 49451819 -150178331 - MIR SINE MIR -39 223 5 3293 75 0 2 chr5 49454269 49454710 -150175440 - L1PA7 LINE L1 -5 6149 5710 25 31 0 0 chr5 49454716 49454748 -150175402 + AT_rich Low_complexity Low_complexity 1 32 0 467 309 22 14 chr5 49455106 49455245 -150174905 - MIR3 SINE MIR -37 171 32 1998 146 7 3 chr5 49455822 49456131 -150174019 + AluJb SINE Alu 1 310 -2 1511 197 3 14 chr5 49456875 49457169 -150172981 - AluJo SINE Alu -21 291 1 972 355 81 43 chr5 49457170 49457962 -150172188 + L3 LINE CR1 405 1265 -312 5508 49 0 0 chr5 49457962 49458640 -150171510 + L1PA7 LINE L1 5475 6152 -2 972 355 81 43 chr5 49458640 49458888 -150171262 + L3 LINE CR1 1265 1502 -75 243 61 0 0 chr5 49459748 49459781 -150170369 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 1783 40 5 5 chr5 49459947 49460171 -150169979 - L1PA7 LINE L1 -3 6151 5928 340 101 0 101 chr5 49461246 49461325 -150168825 - L1MA8 LINE L1 -3 6288 6218 1011 126 62 10 chr5 49461468 49461659 -150168491 - L1MA7 LINE L1 -292 6008 5812 326 263 139 15 chr5 49461716 49461853 -150168297 - MARNA DNA Mariner -344 242 89 21 0 0 0 chr5 49462331 49462352 -150167798 + AT_rich Low_complexity Low_complexity 1 21 0 234 242 150 39 chr5 49462831 49462984 -150167166 - L1ME4a LINE L1 -74 6047 5878 300 312 73 18 chr5 49463174 49463283 -150166867 + MIR SINE MIR 21 135 -127 180 0 0 0 chr5 49463987 49464007 -150166143 + (CA)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr5 49465284 49465307 -150164843 + AT_rich Low_complexity Low_complexity 1 23 0 522 205 200 5 chr5 49465483 49465673 -150164477 + MER69 DNA AcHobo 2300 2526 0 24 0 0 0 chr5 49467332 49467356 -150162794 + AT_rich Low_complexity Low_complexity 1 24 0 338 201 49 21 chr5 49467515 49467659 -150162491 + (TA)n Simple_repeat Simple_repeat 1 148 0 24 32 0 0 chr5 49468170 49468201 -150161949 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 49468368 49468404 -150161746 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 49470058 49470080 -150160070 + AT_rich Low_complexity Low_complexity 1 22 0 212 158 0 0 chr5 49470451 49470489 -150159661 + (CA)n Simple_repeat Simple_repeat 2 39 0 282 115 0 0 chr5 49471308 49471360 -150158790 + (TTCA)n Simple_repeat Simple_repeat 2 53 0 236 299 52 52 chr5 49471364 49471498 -150158652 - L2 LINE L2 -4 3309 3176 38 0 0 0 chr5 49471672 49471710 -150158440 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 49471877 49471907 -150158243 + AT_rich Low_complexity Low_complexity 1 30 0 32 75 0 0 chr5 49473091 49473158 -150156992 + AT_rich Low_complexity Low_complexity 1 67 0 2132 115 3 0 chr5 49474520 49474815 -150155335 - AluSg SINE Alu -14 296 1 310 237 52 31 chr5 49474891 49474988 -150155162 - L1MC4 LINE L1 -1330 6712 6614 182 327 0 0 chr5 49476560 49476615 -150153535 - L2 LINE L2 -32 3240 3186 2089 138 3 0 chr5 49476814 49477112 -150153038 + AluSx SINE Alu 1 299 -13 246 176 9 2 chr5 49477171 49477404 -150152746 + AluJb SINE Alu 2 292 -10 211 215 77 31 chr5 49478276 49478341 -150151809 + MIR3 SINE MIR 105 172 -36 32 43 0 0 chr5 49478404 49478450 -150151700 + AT_rich Low_complexity Low_complexity 1 46 0 212 273 71 20 chr5 49478459 49478558 -150151592 - MIR SINE MIR -75 187 84 2178 89 4 0 chr5 49478636 49478941 -150151209 - AluSp SINE Alu 0 307 2 248 167 0 19 chr5 49479516 49479570 -150150580 + (TA)n Simple_repeat Simple_repeat 1 53 0 186 143 0 0 chr5 49479750 49479785 -150150365 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 24 0 0 0 chr5 49480110 49480134 -150150016 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr5 49480577 49480616 -150149534 + AT_rich Low_complexity Low_complexity 1 39 0 811 347 27 15 chr5 49482336 49482673 -150147477 - LTR33 LTR ERVL -33 488 148 486 387 55 31 chr5 49483742 49484127 -150146023 - L2 LINE L2 -496 2818 2425 502 217 25 56 chr5 49484158 49484319 -150145831 + AluJb SINE Alu 137 292 -20 32 43 0 0 chr5 49485324 49485370 -150144780 + AT_rich Low_complexity Low_complexity 1 46 0 42480 35 22 1 chr5 49485978 49492002 -150138148 + L1PA2 LINE L1 4 6155 0 23 0 0 0 chr5 49492168 49492191 -150137959 + AT_rich Low_complexity Low_complexity 1 23 0 233 326 65 29 chr5 49493974 49494112 -150136038 + MER5B DNA MER1_type 36 178 0 211 250 143 12 chr5 49494159 49494243 -150135907 - MIR SINE MIR -56 206 112 2479 47 0 3 chr5 49494670 49494967 -150135183 + AluY SINE Alu 1 296 -15 21 36 0 0 chr5 49495136 49495164 -150134986 + AT_rich Low_complexity Low_complexity 1 28 0 2774 191 46 15 chr5 49495933 49496520 -150133630 - L1MA10 LINE L1 -7 6327 5723 3252 82 27 0 chr5 49496520 49496961 -150133189 + MLT2A2 LTR ERVL 1 453 0 399 196 157 0 chr5 49497351 49497453 -150132697 - MIR SINE MIR 0 262 145 1132 164 34 11 chr5 49497453 49497825 -150132325 - MER21A LTR ERV1 -363 500 100 2390 113 40 9 chr5 49497826 49498172 -150131978 + THE1B LTR MaLR 8 364 0 4921 189 54 19 chr5 49498172 49498496 -150131654 - L1MA10 LINE L1 -441 5727 5416 405 0 0 0 chr5 49498496 49498541 -150131609 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 4921 189 54 19 chr5 49498541 49499221 -150130929 - L1MA10 LINE L1 -752 5416 4666 2745 16 0 0 chr5 49499221 49499526 -150130624 + AluYa5 SINE Alu 1 305 -6 4921 189 54 19 chr5 49499526 49500048 -150130102 - L1MA10 LINE L1 -1502 4666 4164 374 278 8 48 chr5 49500289 49500415 -150129735 + L2 LINE L2 3193 3313 0 1905 130 29 46 chr5 49500952 49501297 -150128853 + MER44D DNA MER2_type 1 609 0 231 276 13 0 chr5 49503521 49503597 -150126553 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 30 45 0 0 chr5 49503780 49503824 -150126326 + AT_rich Low_complexity Low_complexity 1 44 0 600 281 27 16 chr5 49505651 49505836 -150124314 - MER5A DNA MER1_type -2 187 1 1954 126 60 20 chr5 49506908 49507256 -150122894 - THE1C LTR MaLR 0 375 14 356 250 86 8 chr5 49509142 49509270 -150120880 + L2 LINE L2 3171 3308 -5 741 299 6 20 chr5 49509885 49510197 -150119953 + L1ME2 LINE L1 5667 5971 -150 198 0 0 0 chr5 49510423 49510445 -150119705 + (CAA)n Simple_repeat Simple_repeat 2 23 0 226 224 0 17 chr5 49511117 49511175 -150118975 + GA-rich Low_complexity Low_complexity 3 59 0 216 0 0 0 chr5 49511539 49511563 -150118587 + (A)n Simple_repeat Simple_repeat 1 24 0 1814 146 40 0 chr5 49511619 49511916 -150118234 - AluSx SINE Alu 0 308 1 36 0 0 0 chr5 49511919 49511955 -150118195 + AT_rich Low_complexity Low_complexity 1 36 0 223 256 103 45 chr5 49512038 49512116 -150118034 + MIR SINE MIR 71 143 -119 1713 214 61 13 chr5 49512116 49512494 -150117656 - MSTD LTR MaLR 0 396 1 223 256 103 45 chr5 49512494 49512569 -150117581 + MIR SINE MIR 143 233 -29 24 0 0 0 chr5 49513584 49513608 -150116542 + AT_rich Low_complexity Low_complexity 1 24 0 277 315 91 35 chr5 49514944 49515176 -150114974 + L2 LINE L2 1825 2069 -1245 733 243 149 4 chr5 49515490 49515745 -150114405 + L2 LINE L2 3021 3312 -1 275 280 51 69 chr5 49515855 49516030 -150114120 - MLT1J LTR MaLR -11 500 329 363 284 15 37 chr5 49516187 49516321 -150113829 - MLT1J1 LTR MaLR -308 138 8 1738 200 82 22 chr5 49516947 49517046 -150113104 + Charlie1b DNA MER1_type 1 93 -2668 1862 141 31 0 chr5 49517046 49517336 -150112814 + AluSx SINE Alu 1 299 -13 1738 200 82 22 chr5 49517336 49517687 -150112463 + Charlie1b DNA MER1_type 93 478 -45 380 167 0 36 chr5 49517713 49517797 -150112353 - LTR30 LTR ERV1 -98 624 544 266 180 0 0 chr5 49517797 49517847 -150112303 - LTR12 LTR ERV1 -437 277 228 239 36 0 0 chr5 49517850 49517878 -150112272 + Charlie1b DNA MER1_type 463 490 -33 279 0 0 0 chr5 49520574 49520605 -150109545 + (CA)n Simple_repeat Simple_repeat 1 31 0 215 125 25 0 chr5 49522208 49522248 -150107902 + (TATG)n Simple_repeat Simple_repeat 1 41 0 180 0 0 0 chr5 49523157 49523177 -150106973 + (T)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr5 49524574 49524597 -150105553 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr5 49526272 49526301 -150103849 + AT_rich Low_complexity Low_complexity 1 29 0 190 231 19 19 chr5 49528979 49529031 -150101119 + MIR3 SINE MIR 157 208 0 498 108 0 0 chr5 49530106 49530180 -150099970 + (A)n Simple_repeat Simple_repeat 1 74 0 350 184 0 23 chr5 49531178 49531265 -150098885 + (CTCG)n Simple_repeat Simple_repeat 1 85 0 24 0 0 0 chr5 49532522 49532546 -150097604 + AT_rich Low_complexity Low_complexity 1 24 0 298 241 11 46 chr5 49533467 49533554 -150096596 + CT-rich Low_complexity Low_complexity 2 85 0 23 0 0 0 chr5 49534001 49534024 -150096126 + AT_rich Low_complexity Low_complexity 1 23 0 333 0 0 0 chr5 49534373 49534410 -150095740 + (CA)n Simple_repeat Simple_repeat 2 38 0 267 103 0 0 chr5 49536344 49536383 -150093767 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 205 179 0 26 chr5 49537634 49537673 -150092477 + CT-rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr5 49539105 49539126 -150091024 + (T)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr5 49544822 49544850 -150085300 + AT_rich Low_complexity Low_complexity 1 28 0 927 208 47 114 chr5 49547626 49548029 -150082121 + L1ME1 LINE L1 5786 6161 -5 317 286 118 89 chr5 49549440 49549789 -150080361 + MLT1J LTR MaLR 44 402 -109 2449 213 67 65 chr5 49549792 49550439 -150079711 - MLT1E1 LTR MaLR -6 648 1 2142 108 7 3 chr5 49550667 49550963 -150079187 + AluSx SINE Alu 1 297 -15 1789 148 0 39 chr5 49550968 49551273 -150078877 + AluJo SINE Alu 1 293 -19 2907 213 18 15 chr5 49551525 49552132 -150078018 - MER90 LTR ERV1 0 614 6 25 31 0 0 chr5 49554316 49554348 -150075802 + AT_rich Low_complexity Low_complexity 1 32 0 1730 174 0 21 chr5 49555552 49555840 -150074310 - AluJo SINE Alu -30 282 1 22 0 0 0 chr5 49555961 49555983 -150074167 + AT_rich Low_complexity Low_complexity 1 22 0 2024 134 0 0 chr5 49556383 49556695 -150073455 - AluJb SINE Alu 0 312 1 388 282 32 27 chr5 49556879 49557067 -150073083 - LTR33 LTR ERVL -6 515 327 372 259 259 0 chr5 49557140 49557275 -150072875 - LTR33 LTR ERVL -323 198 29 1770 225 123 7 chr5 49557297 49557417 -150072733 - MLT1D LTR MaLR -1 504 399 2181 126 7 0 chr5 49557417 49557727 -150072423 + AluSx SINE Alu 1 312 0 1770 225 123 7 chr5 49557727 49558054 -150072096 - MLT1D LTR MaLR -106 399 5 186 43 0 0 chr5 49558459 49558482 -150071668 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1514 180 17 42 chr5 49558484 49558773 -150071377 - AluJo SINE Alu -30 282 1 652 299 82 50 chr5 49558864 49559202 -150070948 + LTR33 LTR ERVL 11 370 -151 2064 116 35 0 chr5 49559202 49559487 -150070663 - AluSq SINE Alu -18 295 1 652 299 82 50 chr5 49559487 49559623 -150070527 + LTR33 LTR ERVL 370 500 -21 1636 181 8 46 chr5 49561089 49561460 -150068690 + L1MA3 LINE L1 5948 6304 -1 1035 252 108 44 chr5 49562524 49562933 -150067217 - LTR16A LTR ERVL 0 450 16 1205 361 41 23 chr5 49563069 49564281 -150065869 - HERVL LTR ERVL -314 5340 4102 701 279 69 40 chr5 49564339 49564452 -150065698 - LTR16A LTR ERVL -72 378 270 849 79 79 0 chr5 49564452 49564579 -150065571 - MER85 DNA T2_type -2 137 1 701 279 69 40 chr5 49564579 49564712 -150065438 - LTR16A LTR ERVL -180 270 125 42889 49 1 1 chr5 49565964 49572119 -150058031 - L1PA4 LINE L1 -2 6153 3 312 88 175 18 chr5 49574344 49574401 -150055749 - MSTC LTR MaLR 0 428 363 1316 100 0 0 chr5 49574403 49574573 -150055577 + AluSc SINE Alu 135 304 -5 1040 303 27 11 chr5 49574978 49575345 -150054805 + LTR16B LTR ERVL 39 411 -53 943 245 72 32 chr5 49575419 49575791 -150054359 - MLT1G3 LTR MaLR -177 353 1 28 29 0 0 chr5 49577866 49577901 -150052249 + AT_rich Low_complexity Low_complexity 1 35 0 398 274 196 0 chr5 49581616 49581784 -150048366 + MIR SINE MIR 57 257 -5 1867 171 0 3 chr5 49581981 49582279 -150047871 + AluJb SINE Alu 1 297 -15 290 313 82 8 chr5 49582909 49583043 -150047107 + MIR SINE MIR 112 255 -7 365 314 61 76 chr5 49583125 49583402 -150046748 - L2 LINE L2 -56 3257 2985 36480 30 1 0 chr5 49584803 49590041 -150040109 + L1PA2 LINE L1 952 6191 0 23 0 0 0 chr5 49590228 49590251 -150039899 + AT_rich Low_complexity Low_complexity 1 23 0 280 337 101 28 chr5 49590259 49590437 -150039713 + MIR SINE MIR 6 196 -66 1206 336 44 7 chr5 49591152 49591586 -150038564 - LTR16A LTR ERVL 0 450 1 191 311 79 45 chr5 49593419 49593596 -150036554 - MIR SINE MIR -46 216 34 359 336 66 12 chr5 49594344 49594585 -150035565 + L3b LINE CR1 1125 1378 -205 1078 192 13 18 chr5 49594666 49594890 -150035260 + MLT1B LTR MaLR 1 223 -167 867 225 111 16 chr5 49594930 49595174 -150034976 + MLT1B LTR MaLR 201 467 0 1402 129 5 18 chr5 49595876 49596093 -150034057 - AluSg/x SINE Alu -28 284 71 21 0 0 0 chr5 49596594 49596615 -150033535 + AT_rich Low_complexity Low_complexity 1 21 0 332 349 67 20 chr5 49596632 49596827 -150033323 - MIR SINE MIR -50 212 9 228 135 0 0 chr5 49597319 49597356 -150032794 - MIR3 SINE MIR -13 195 159 858 350 161 25 chr5 49597371 49598215 -150031935 - L3 LINE CR1 -136 1441 483 364 174 29 0 chr5 49598332 49598401 -150031749 + MLT1J LTR MaLR 99 169 -342 492 204 10 0 chr5 49598701 49598804 -150031346 - U13 snRNA snRNA 0 104 1 8517 164 116 58 chr5 49600626 49600971 -150029179 + L1MC1 LINE L1 20 343 -6083 267 31 0 0 chr5 49600971 49601003 -150029147 + (GA)n Simple_repeat Simple_repeat 1 32 0 8517 164 116 58 chr5 49601003 49601616 -150028534 + L1MC1 LINE L1 343 919 -5507 353 0 0 0 chr5 49601616 49601659 -150028491 - L1PA3 LINE L1 -4 6151 6109 8517 164 116 58 chr5 49601659 49602086 -150028064 + L1MC1 LINE L1 919 1320 -5106 249 83 0 0 chr5 49602086 49602122 -150028028 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 8517 164 116 58 chr5 49602122 49602908 -150027242 + L1MC1 LINE L1 1320 2320 -4106 1211 199 0 4 chr5 49602908 49603134 -150027016 + AluJo SINE Alu 87 311 -1 10755 223 40 11 chr5 49603137 49603645 -150026505 + L1MC1 LINE L1 2323 2815 -3798 1756 106 0 12 chr5 49603645 49603927 -150026223 + AluY SINE Alu 41 319 0 10755 223 40 11 chr5 49603927 49607144 -150023006 + L1MC1 LINE L1 2815 6166 -447 191 212 15 76 chr5 49607172 49607238 -150022912 + L2 LINE L2 3250 3311 -2 2523 43 10 0 chr5 49607529 49607833 -150022317 - AluY SINE Alu -4 307 1 271 326 61 10 chr5 49608056 49608154 -150021996 - L2 LINE L2 -37 3235 3133 1796 154 9 39 chr5 49608375 49608766 -150021384 + Tigger3(Golem) DNA MER2_type 1 3029 0 836 212 309 42 chr5 49608837 49609247 -150020903 + MLT1G1 LTR MaLR 47 593 -2 1318 161 0 128 chr5 49609561 49609866 -150020284 + AluJo SINE Alu 1 266 -46 43994 41 1 1 chr5 49610145 49616296 -150013854 - L1PA3 LINE L1 -4 6151 1 2589 31 0 0 chr5 49616519 49616810 -150013340 + AluYa5 SINE Alu 1 291 -20 253 250 132 69 chr5 49616988 49617132 -150013018 - MIR SINE MIR 0 262 110 2164 104 30 0 chr5 49617164 49617461 -150012689 - AluSq SINE Alu -7 306 1 258 321 0 12 chr5 49617488 49617572 -150012578 - MIR SINE MIR -173 89 7 204 146 24 0 chr5 49617627 49617668 -150012482 + GA-rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr5 49618655 49618697 -150011453 + AT_rich Low_complexity Low_complexity 1 42 0 227 316 29 73 chr5 49621090 49621226 -150008924 + MLT1K LTR MaLR 16 145 -443 395 295 104 17 chr5 49621266 49621439 -150008711 + MLT1K LTR MaLR 237 424 -164 2103 175 42 22 chr5 49621553 49622009 -150008141 - MLT1C LTR MaLR 0 467 3 290 347 44 21 chr5 49623013 49623235 -150006915 + MIR SINE MIR 16 262 0 521 246 78 57 chr5 49623461 49623705 -150006445 - LTR16A1 LTR ERVL 0 457 209 1990 107 0 0 chr5 49624882 49625134 -150005016 - AluSx SINE Alu -39 273 22 810 286 67 44 chr5 49625703 49626182 -150003968 - L1ME4a LINE L1 -156 5965 5476 244 369 40 13 chr5 49626961 49627110 -150003040 + MIR3 SINE MIR 28 180 -28 1740 27 32 9 chr5 49627541 49627762 -150002388 - L1PA4 LINE L1 0 6155 5930 787 258 135 56 chr5 49628369 49628904 -150001246 + LTR50 LTR ERVL 17 593 -202 309 207 85 0 chr5 49628945 49629027 -150001123 + LTR33A LTR ERVL 430 518 -5 1015 243 164 22 chr5 49630647 49630775 -149999375 + MLT1A1 LTR MaLR 4 112 -253 2604 17 40 0 chr5 49630775 49631074 -149999076 - AluY SINE Alu 0 311 1 1015 243 164 22 chr5 49631074 49631262 -149998888 + MLT1A1 LTR MaLR 112 365 0 642 151 103 16 chr5 49631262 49631388 -149998762 + MLT1A1-int LTR MaLR 3 139 -1596 21 36 0 0 chr5 49631520 49631548 -149998602 + AT_rich Low_complexity Low_complexity 1 28 0 259 323 24 71 chr5 49631983 49632110 -149998040 + MIR SINE MIR 23 143 -65 230 254 35 26 chr5 49632799 49632913 -149997237 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 446 258 18 18 chr5 49632934 49633097 -149997053 + HAL1b LINE L1 1179 1341 -7 231 279 0 29 chr5 49633141 49633209 -149996941 + MIR SINE MIR 126 191 -71 213 65 0 0 chr5 49633839 49633870 -149996280 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 415 277 20 0 chr5 49635902 49636003 -149994147 + MER5A DNA MER1_type 4 106 -83 24 0 0 0 chr5 49636272 49636296 -149993854 + AT_rich Low_complexity Low_complexity 1 24 0 2298 94 0 13 chr5 49636776 49637083 -149993067 + AluSx SINE Alu 1 303 -9 1840 90 28 164 chr5 49637404 49637836 -149992314 - THE1C LTR MaLR -2 373 1 419 321 69 0 chr5 49638041 49638287 -149991863 - LTR16C LTR ERVL -2 489 227 585 228 0 15 chr5 49638895 49639031 -149991119 + L1PA16 LINE L1 6033 6166 0 2358 172 25 20 chr5 49639359 49639806 -149990344 - MER39 LTR ERV1 0 707 259 208 275 66 11 chr5 49640865 49640956 -149989194 - MIR SINE MIR -70 192 97 432 303 8 0 chr5 49640960 49641082 -149989068 - LTR16A1 LTR ERVL -2 455 333 21 0 0 0 chr5 49641595 49641616 -149988534 + AT_rich Low_complexity Low_complexity 1 21 0 205 89 44 0 chr5 49641706 49641751 -149988399 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 205 321 0 24 chr5 49642033 49642117 -149988033 - MIR SINE MIR -173 89 8 247 380 88 41 chr5 49642151 49642333 -149987817 + L3 LINE CR1 1143 1315 -262 1802 83 4 0 chr5 49642333 49642573 -149987577 + L1PA7 LINE L1 5914 6154 0 247 380 88 41 chr5 49642573 49642777 -149987373 + L3 LINE CR1 1315 1547 -30 2371 61 0 0 chr5 49642878 49643172 -149986978 - AluY SINE Alu -17 294 1 303 154 0 0 chr5 49746006 49746071 -149884079 + CT-rich Low_complexity Low_complexity 1 65 0 272 264 38 66 chr5 49746076 49746182 -149883968 - L2 LINE L2 -31 3241 3139 311 276 148 28 chr5 49746602 49746819 -149883331 - L1ME4a LINE L1 -26 6095 5853 335 257 35 35 chr5 49748112 49748225 -149881925 - L2 LINE L2 0 3313 3201 207 318 48 40 chr5 49748614 49748740 -149881410 - L2 LINE L2 0 3313 3187 384 268 62 0 chr5 49749192 49749289 -149880861 - MIR SINE MIR -69 193 91 621 149 0 106 chr5 49750730 49750871 -149879279 - FLAM_C SINE Alu -6 127 2 21 36 0 0 chr5 49751287 49751315 -149878835 + AT_rich Low_complexity Low_complexity 1 28 0 390 360 32 11 chr5 49751343 49751529 -149878621 + MIR SINE MIR 3 192 -70 549 167 50 0 chr5 49755063 49755177 -149874973 + L1ME1 LINE L1 6058 6177 -1 1416 185 16 16 chr5 49755329 49755637 -149874513 - L1MA6 LINE L1 -1 6299 5992 208 360 0 0 chr5 49755713 49755788 -149874362 + L2 LINE L2 3223 3297 -16 754 183 0 8 chr5 49755849 49755980 -149874170 - FLAM_C SINE Alu 0 133 4 30 27 0 0 chr5 49756001 49756038 -149874112 + AT_rich Low_complexity Low_complexity 1 37 0 524 339 69 37 chr5 49757378 49757859 -149872291 + MLT1J LTR MaLR 1 496 -15 25 0 0 0 chr5 49758385 49758410 -149871740 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5 49758445 49758466 -149871684 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr5 49759579 49759605 -149870545 + (TAG)n Simple_repeat Simple_repeat 2 27 0 232 271 0 0 chr5 49759620 49759679 -149870471 - MIR SINE MIR -10 252 194 448 177 13 0 chr5 49759679 49759758 -149870392 - MER116 DNA Mariner 0 80 1 801 207 41 0 chr5 49759758 49759927 -149870223 - MIR SINE MIR -79 183 8 549 246 140 18 chr5 49759936 49760107 -149870043 - MIR SINE MIR -41 221 30 203 360 45 92 chr5 49760401 49760804 -149869346 + L2 LINE L2 996 1379 -1935 555 79 0 0 chr5 49761061 49761137 -149869013 - L1PA8 LINE L1 -221 5910 5835 1832 66 0 0 chr5 49761137 49761378 -149868772 + L1PA8 LINE L1 5925 6168 -4 226 293 30 50 chr5 49761883 49761982 -149868168 + L2 LINE L2 1833 1929 -1385 299 324 46 35 chr5 49762070 49762243 -149867907 - L2 LINE L2 0 3313 3139 1569 140 79 11 chr5 49762272 49762565 -149867585 + AluSx SINE Alu 1 311 0 27 73 0 0 chr5 49764555 49764610 -149865540 + AT_rich Low_complexity Low_complexity 1 55 0 271 59 0 0 chr5 49764850 49764884 -149865266 - HSMAR1 DNA Mariner 0 1287 1254 2444 72 0 0 chr5 49765661 49765966 -149864184 - AluY SINE Alu -6 305 1 23 0 0 0 chr5 49768507 49768530 -149861620 + AT_rich Low_complexity Low_complexity 1 23 0 397 230 90 0 chr5 49768905 49769005 -149861145 - MER5B DNA MER1_type -5 173 65 354 61 0 0 chr5 49770578 49770627 -149859523 + (GA)n Simple_repeat Simple_repeat 1 49 0 206 318 15 15 chr5 49771585 49771651 -149858499 + MIR3 SINE MIR 5 70 -138 245 271 215 0 chr5 49771904 49772011 -149858139 + MER91B DNA MER1_type 1 130 -60 320 238 0 50 chr5 49772026 49772106 -149858044 + MER91B DNA MER1_type 87 162 -28 390 335 111 8 chr5 49772850 49773123 -149857027 + L2 LINE L2 2686 3007 -306 2400 53 0 10 chr5 49773123 49773426 -149856724 - AluY SINE Alu -11 300 1 390 335 111 8 chr5 49773426 49773496 -149856654 + L2 LINE L2 3007 3068 -245 26 30 0 0 chr5 49774936 49774969 -149855181 + AT_rich Low_complexity Low_complexity 1 33 0 3827 263 117 61 chr5 49775348 49775852 -149854298 - L1MC3 LINE L1 -78 7707 7233 276 220 17 0 chr5 49775852 49775911 -149854239 - MLT1F1 LTR MaLR -480 87 28 3827 263 117 61 chr5 49775911 49776044 -149854106 - L1MC3 LINE L1 -552 7233 7109 216 0 0 0 chr5 49776044 49776068 -149854082 + (TA)n Simple_repeat Simple_repeat 2 25 0 3827 263 117 61 chr5 49776068 49776458 -149853692 - L1MC3 LINE L1 -676 7109 6742 399 21 0 0 chr5 49776458 49776506 -149853644 + (CA)n Simple_repeat Simple_repeat 2 49 0 3827 263 117 61 chr5 49776506 49777472 -149852678 - L1MC3 LINE L1 -1043 6742 5538 523 184 0 0 chr5 49777479 49777566 -149852584 - Tigger5 DNA MER2_type 0 2323 2237 1965 241 56 58 chr5 49777622 49779221 -149850929 - L1MC3 LINE L1 -627 5539 3789 1581 165 53 7 chr5 49779240 49779525 -149850625 - AluJo SINE Alu -1 311 14 378 0 0 0 chr5 49779545 49779587 -149850563 + (TC)n Simple_repeat Simple_repeat 2 43 0 266 92 46 15 chr5 49779587 49779652 -149850498 + (TA)n Simple_repeat Simple_repeat 1 67 0 746 241 39 9 chr5 49779681 49779963 -149850187 - L1MCc LINE L1 -2370 4571 4278 * 2139 276 76 39 chr5 49779937 49781230 -149848920 - L1MCc LINE L1 -3638 3303 2060 1848 156 7 3 chr5 49781230 49781518 -149848632 + AluSx SINE Alu 1 289 -23 524 56 14 0 chr5 49781520 49781592 -149848558 + (TA)n Simple_repeat Simple_repeat 2 74 0 2139 276 76 39 chr5 49781592 49782545 -149847605 - L1MCc LINE L1 -4881 2060 814 361 284 77 91 chr5 49782732 49783141 -149847009 - L1MCc LINE L1 -5629 793 52 227 305 98 24 chr5 49783616 49783741 -149846409 - MIR SINE MIR -61 147 21 1480 164 120 23 chr5 49783933 49784275 -149845875 - THE1C LTR MaLR 0 375 1 263 323 21 21 chr5 49784293 49784386 -149845764 + MIR SINE MIR 20 112 -150 261 0 0 0 chr5 49784783 49784812 -149845338 + (TG)n Simple_repeat Simple_repeat 1 29 0 1526 98 31 21 chr5 49784895 49785165 -149844985 - THE1B LTR MaLR -2 362 1 1084 243 25 4 chr5 49785323 49785562 -149844588 - L1MCa LINE L1 -5797 629 386 803 221 54 68 chr5 49785562 49785842 -149844308 - MLT1A1 LTR MaLR -89 276 1 304 132 0 38 chr5 49785847 49785900 -149844250 - MSTC LTR MaLR -377 51 1 1311 217 22 50 chr5 49785937 49786259 -149843891 - L1MCa LINE L1 -6095 331 19 571 289 61 31 chr5 49786602 49786830 -149843320 + MIR SINE MIR 8 242 -20 369 317 87 29 chr5 49786860 49787068 -149843082 + L3 LINE CR1 1348 1567 -10 343 221 0 158 chr5 49787416 49787543 -149842607 + MER102a DNA MER1_type 222 328 -2 210 71 0 0 chr5 49787786 49787814 -149842336 + (TA)n Simple_repeat Simple_repeat 1 28 0 2208 104 20 0 chr5 49788661 49788959 -149841191 - AluSq SINE Alu -9 304 1 1244 124 62 44 chr5 49790059 49790178 -149839972 - MER30 DNA MER1_type 0 230 104 198 0 0 0 chr5 49790178 49790200 -149839950 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1244 124 62 44 chr5 49790200 49790306 -149839844 - MER30 DNA MER1_type -126 104 1 262 297 42 33 chr5 49790636 49790848 -149839302 - L1ME4a LINE L1 -16 6105 5892 411 323 97 26 chr5 49790853 49791203 -149838947 - L1ME4a LINE L1 -265 5856 5482 22 70 0 0 chr5 49791230 49791273 -149838877 + AT_rich Low_complexity Low_complexity 1 43 0 7214 44 2 1 chr5 49791422 49792703 -149837447 + L1PA5 LINE L1 4867 6148 -6 25 105 0 0 chr5 49792990 49793085 -149837065 + AT_rich Low_complexity Low_complexity 1 95 0 271 398 0 0 chr5 49793114 49793217 -149836933 - L2 LINE L2 -19 3294 3192 370 315 162 44 chr5 49793607 49794125 -149836025 - L1ME4a LINE L1 -1617 4529 3954 224 200 0 0 chr5 49795063 49795103 -149835047 + (CAT)n Simple_repeat Simple_repeat 3 42 0 21 0 0 0 chr5 49796179 49796200 -149833950 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr5 49799077 49799125 -149831025 + AT_rich Low_complexity Low_complexity 1 48 0 559 158 42 0 chr5 49799265 49799385 -149830765 + L1MA7 LINE L1 6156 6280 -11 24 53 0 0 chr5 49801055 49801093 -149829057 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr5 49801324 49801362 -149828788 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr5 49802367 49802396 -149827754 + AT_rich Low_complexity Low_complexity 1 29 0 1353 164 11 0 chr5 49802403 49802672 -149827478 - L1MA4 LINE L1 -6 6294 6023 317 287 69 0 chr5 49802905 49802992 -149827158 + L2 LINE L2 3168 3260 -12 21 0 0 0 chr5 49803149 49803170 -149826980 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr5 49805074 49805103 -149825047 + AT_rich Low_complexity Low_complexity 1 29 0 218 286 71 32 chr5 49805245 49805371 -149824779 + MIR SINE MIR 118 248 -14 252 333 32 11 chr5 49807529 49807622 -149822528 - L2 LINE L2 0 3272 3178 206 362 49 32 chr5 49809085 49809270 -149820880 + MER5A DNA MER1_type 1 188 -1 200 348 130 0 chr5 49809276 49809368 -149820782 + L2 LINE L2 3153 3256 -16 2214 110 15 0 chr5 49809451 49809777 -149820373 + L1PA15 LINE L1 5835 6165 0 4094 266 84 25 chr5 49809805 49811536 -149818614 + L1M4b LINE L1 345 2196 -4763 327 25 0 0 chr5 49811536 49811576 -149818574 + (CA)n Simple_repeat Simple_repeat 2 41 0 4094 266 84 25 chr5 49811576 49811803 -149818347 + L1M4b LINE L1 2196 2408 -4551 2887 159 18 38 chr5 49811888 49812443 -149817707 + Tigger3b DNA MER2_type 2 545 -686 2345 81 39 0 chr5 49812445 49812780 -149817370 - L1PA7 LINE L1 -1 6153 5806 4571 211 32 11 chr5 49812780 49813900 -149816250 - L1 LINE L1 -2358 5207 4064 295 204 34 11 chr5 49813952 49814040 -149816110 - L1MC4 LINE L1 -1339 6703 6614 850 257 32 8 chr5 49814074 49814323 -149815827 - L1 LINE L1 -3493 4072 3818 184 91 78 26 chr5 49814352 49814429 -149815721 + (CATAT)n Simple_repeat Simple_repeat 2 82 0 330 168 71 51 chr5 49814440 49814790 -149815360 + (CACAT)n Simple_repeat Simple_repeat 1 356 0 * 356 96 132 15 chr5 49814668 49814890 -149815260 + (CATAT)n Simple_repeat Simple_repeat 1 247 0 394 133 0 92 chr5 49814908 49815104 -149815046 + (TA)n Simple_repeat Simple_repeat 2 179 0 312 120 105 8 chr5 49815109 49815242 -149814908 + (CATAT)n Simple_repeat Simple_repeat 2 147 0 1928 244 59 55 chr5 49815258 49816612 -149813538 - L1 LINE L1 -3734 3831 2558 3792 54 4 0 chr5 49816615 49817093 -149813057 - L1PA7 LINE L1 0 6154 5675 720 173 39 130 chr5 49817226 49817480 -149812670 + MLT1C LTR MaLR 68 298 -169 4158 238 52 27 chr5 49817556 49819033 -149811117 - L1MCb LINE L1 -2134 4430 2917 3257 229 59 32 chr5 49819044 49820968 -149809182 - L1MCb LINE L1 -3894 2851 671 1009 176 38 25 chr5 49820968 49821206 -149808944 + L1MB7 LINE L1 5944 6184 0 347 345 72 30 chr5 49821293 49821626 -149808524 + L1ME4a LINE L1 5772 6118 -3 30 0 0 0 chr5 49822560 49822590 -149807560 + AT_rich Low_complexity Low_complexity 1 30 0 950 218 23 5 chr5 49822925 49823145 -149807005 - MER58A DNA MER1_type 0 224 1 21 71 0 0 chr5 49823573 49823615 -149806535 + AT_rich Low_complexity Low_complexity 1 42 0 1733 241 58 24 chr5 49824425 49824877 -149805273 + MLT2B1 LTR ERVL 1 467 -53 614 285 84 18 chr5 49826144 49826418 -149803732 - L2 LINE L2 -98 3215 2924 1701 209 30 70 chr5 49826614 49827088 -149803062 - MLT1C LTR MaLR 0 467 13 22 0 0 0 chr5 49829450 49829472 -149800678 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr5 49829787 49829825 -149800325 + AT_rich Low_complexity Low_complexity 1 38 0 231 297 138 14 chr5 49829890 49830166 -149799984 + L1MC4a LINE L1 5080 5389 -757 323 396 58 16 chr5 49830174 49830608 -149799542 + L1MC4a LINE L1 5398 5849 -1959 288 0 0 0 chr5 49831592 49831624 -149798526 + (TG)n Simple_repeat Simple_repeat 1 32 0 180 0 0 0 chr5 49831623 49831643 -149798507 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 3558 243 75 16 chr5 49831645 49832646 -149797504 + L1MD2 LINE L1 583 1642 -4898 1250 221 47 8 chr5 49832679 49833041 -149797109 + L1MD2 LINE L1 3258 3633 -2907 2376 160 10 22 chr5 49833043 49833455 -149796695 + MLT2D LTR ERVL 1 407 -7 4137 249 27 51 chr5 49833462 49835039 -149795111 + L1MD2 LINE L1 3628 5166 -1374 290 118 59 0 chr5 49835056 49835107 -149795043 + MADE1 DNA Mariner 2 55 -25 2727 234 94 14 chr5 49835107 49835457 -149794693 + L1MD2 LINE L1 5483 5804 -949 2266 155 39 101 chr5 49835457 49835543 -149794607 - MER44D DNA MER2_type -1882 605 515 237 65 0 0 chr5 49835543 49835574 -149794576 + (TG)n Simple_repeat Simple_repeat 2 32 0 2266 155 39 101 chr5 49835574 49836073 -149794077 - MER44D DNA MER2_type -1972 515 1 2727 234 94 14 chr5 49836073 49836699 -149793451 + L1MD2 LINE L1 5804 6539 -214 350 308 120 0 chr5 49837606 49837739 -149792411 + MIR3 SINE MIR 20 168 -40 342 317 85 20 chr5 49840202 49840401 -149789749 - MIR SINE MIR -14 248 37 208 224 313 0 chr5 49841919 49841986 -149788164 - L3b LINE CR1 -134 1449 1362 21 36 0 0 chr5 49844851 49844879 -149785271 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr5 49845029 49845056 -149785094 + (TA)n Simple_repeat Simple_repeat 2 28 0 275 0 0 28 chr5 49846296 49846332 -149783818 + (TG)n Simple_repeat Simple_repeat 2 36 0 267 256 164 39 chr5 49846917 49847229 -149782921 - L1ME4a LINE L1 -4 6117 5767 253 340 54 44 chr5 49847583 49847633 -149782517 - L1ME4a LINE L1 -2002 5806 5758 2051 144 8 27 chr5 49847633 49848001 -149782149 - MER46B DNA MER2_type 0 236 1 253 340 54 44 chr5 49848001 49848247 -149781903 - L1ME4a LINE L1 -2050 5758 5507 21 0 0 0 chr5 49848276 49848297 -149781853 + AT_rich Low_complexity Low_complexity 1 21 0 184 227 0 27 chr5 49848357 49848432 -149781718 + CT-rich Low_complexity Low_complexity 2 74 0 246 229 0 0 chr5 49848492 49848562 -149781588 + (TA)n Simple_repeat Simple_repeat 2 71 0 376 294 65 75 chr5 49849287 49849672 -149780478 + L1ME3A LINE L1 778 1158 -4961 24 32 0 0 chr5 49850093 49850124 -149780026 + AT_rich Low_complexity Low_complexity 1 31 0 309 327 18 12 chr5 49850184 49850352 -149779798 + L1ME3A LINE L1 4926 5094 -1035 777 278 39 54 chr5 49850368 49850506 -149779644 + L1ME3A LINE L1 5611 5750 -403 1990 104 21 7 chr5 49850506 49850795 -149779355 + AluSq SINE Alu 1 293 -20 777 278 39 54 chr5 49850795 49850990 -149779160 + L1ME3A LINE L1 5750 5939 -214 1688 181 27 40 chr5 49851019 49851243 -149778907 - MLT1A1 LTR MaLR 0 365 146 2409 57 0 19 chr5 49851243 49851559 -149778591 - AluY SINE Alu -1 310 1 1688 181 27 40 chr5 49851559 49851704 -149778446 - MLT1A1 LTR MaLR -219 146 1 203 88 29 0 chr5 49851930 49851964 -149778186 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 26 74 0 0 chr5 49853702 49853756 -149776394 + AT_rich Low_complexity Low_complexity 1 54 0 27 49 0 0 chr5 49853888 49853929 -149776221 + AT_rich Low_complexity Low_complexity 1 41 0 8100 157 19 30 chr5 49854097 49855784 -149774366 + L1MA4A LINE L1 3663 5316 -987 2138 91 21 7 chr5 49855784 49856071 -149774079 + AluSg SINE Alu 1 291 -19 8100 157 19 30 chr5 49856071 49857042 -149773108 + L1MA4A LINE L1 5316 6296 -7 281 328 49 33 chr5 49857073 49857195 -149772955 - L2 LINE L2 0 3313 3190 776 296 120 7 chr5 49857452 49857894 -149772256 + Charlie7 DNA MER1_type 224 715 -1897 290 240 0 10 chr5 49858522 49858618 -149771532 + (TA)n Simple_repeat Simple_repeat 2 96 0 248 0 31 0 chr5 49858728 49858760 -149771390 + (TG)n Simple_repeat Simple_repeat 2 34 0 180 125 0 0 chr5 49858778 49858810 -149771340 + (TA)n Simple_repeat Simple_repeat 2 33 0 202 217 9 9 chr5 49858974 49859080 -149771070 + (TA)n Simple_repeat Simple_repeat 2 107 0 1298 179 47 30 chr5 49859556 49859671 -149770479 + AluJo SINE Alu 4 116 -196 216 97 0 0 chr5 49859671 49859702 -149770448 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1298 179 47 30 chr5 49859702 49859912 -149770238 + AluJo SINE Alu 116 312 0 24 53 0 0 chr5 49860609 49860647 -149769503 + AT_rich Low_complexity Low_complexity 1 38 0 323 310 92 42 chr5 49863385 49863624 -149766526 - L2 LINE L2 0 3313 3063 234 62 0 0 chr5 49864009 49864041 -149766109 + (GA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr5 49864430 49864451 -149765699 + AT_rich Low_complexity Low_complexity 1 21 0 29 84 0 0 chr5 49864628 49864699 -149765451 + AT_rich Low_complexity Low_complexity 1 71 0 229 311 46 77 chr5 49866173 49866369 -149763781 - L2 LINE L2 -86 3186 2997 230 332 20 40 chr5 49866475 49866674 -149763476 - L2 LINE L2 -444 2870 2676 377 264 123 0 chr5 49866703 49866809 -149763341 + L2 LINE L2 3153 3271 -1 22 0 0 0 chr5 49867318 49867340 -149762810 + AT_rich Low_complexity Low_complexity 1 22 0 405 135 9 21 chr5 49867991 49868071 -149762079 - L1PA13 LINE L1 -6 6160 6085 45 0 0 0 chr5 49868074 49868119 -149762031 + AT_rich Low_complexity Low_complexity 1 45 0 26 30 0 0 chr5 49869631 49869664 -149760486 + AT_rich Low_complexity Low_complexity 1 33 0 250 306 99 0 chr5 49869665 49869776 -149760374 - L2 LINE L2 -1561 1753 1632 259 382 11 0 chr5 49869946 49870035 -149760115 - L2 LINE L2 -334 2979 2890 453 310 76 12 chr5 49870325 49870496 -149759654 - MIR SINE MIR -1 261 80 885 250 79 0 chr5 49870751 49870967 -149759183 + MIR SINE MIR 9 241 -21 2217 87 3 13 chr5 49871174 49871483 -149758667 - AluY SINE Alu -3 308 3 264 259 17 0 chr5 49871531 49871589 -149758561 - MIR SINE MIR -123 85 27 230 111 28 0 chr5 49872300 49872336 -149757814 + L2 LINE L2 3265 3301 -12 225 329 26 13 chr5 49872356 49872432 -149757718 - MIR SINE MIR -166 96 20 1987 119 3 23 chr5 49872554 49872864 -149757286 - AluSx SINE Alu -8 304 1 586 284 75 30 chr5 49874792 49875190 -149754960 - L1ME4a LINE L1 -157 5964 5549 432 310 66 38 chr5 49875233 49875446 -149754704 - L1ME4a LINE L1 -2336 5472 5254 22 0 0 0 chr5 49875602 49875624 -149754526 + AT_rich Low_complexity Low_complexity 1 22 0 212 77 26 0 chr5 49876446 49876485 -149753665 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1725 144 42 3 chr5 49876487 49876771 -149753379 - AluSx SINE Alu -16 296 2 5972 155 47 24 chr5 49876858 49877486 -149752664 + Tigger3b DNA MER2_type 2 614 -2414 2118 126 13 0 chr5 49877486 49877795 -149752355 - AluSq SINE Alu 0 313 1 5972 155 47 24 chr5 49877795 49878365 -149751785 + Tigger3b DNA MER2_type 614 1227 -4 23 0 0 0 chr5 49879883 49879906 -149750244 + AT_rich Low_complexity Low_complexity 1 23 0 273 333 9 0 chr5 49881590 49881701 -149748449 - L1M4 LINE L1 -3103 3043 2932 1612 167 167 16 chr5 49882022 49882394 -149747756 + MSTA LTR MaLR 1 428 0 1558 292 87 38 chr5 49882411 49883174 -149746976 + L1ME LINE L1 20 744 -5336 1587 211 89 18 chr5 49883174 49883610 -149746540 + MLT1C LTR MaLR 1 467 0 1558 292 87 38 chr5 49883610 49884558 -149745592 + L1ME LINE L1 744 1770 -4310 23 68 0 0 chr5 49884577 49884621 -149745529 + AT_rich Low_complexity Low_complexity 1 44 0 429 274 131 11 chr5 49884690 49884865 -149745285 + L1MDa LINE L1 877 1072 -5468 274 264 11 0 chr5 49885054 49885145 -149745005 - L1ME3 LINE L1 -5 6157 6066 1147 278 32 11 chr5 49885224 49885598 -149744552 - L1ME1 LINE L1 -134 6032 5651 * 3372 227 67 6 chr5 49885588 49886437 -149743713 - L1MC3 LINE L1 -17 7768 6868 820 217 67 35 chr5 49886476 49886790 -149743360 - L1ME1 LINE L1 -782 5577 5254 23 54 0 0 chr5 49887144 49887181 -149742969 + AT_rich Low_complexity Low_complexity 1 37 0 923 306 45 56 chr5 49887406 49887870 -149742280 + L3 LINE CR1 963 1421 -156 207 0 0 0 chr5 49887891 49887914 -149742236 + (A)n Simple_repeat Simple_repeat 1 23 0 1800 271 122 85 chr5 49888299 49889314 -149740836 + L2 LINE L2 1875 2927 -387 2112 223 66 0 chr5 49889320 49889746 -149740404 + MER70A LTR ERVL 19 472 0 212 316 177 0 chr5 49889747 49889826 -149740324 + L2 LINE L2 2919 3011 -302 1237 242 30 21 chr5 49889854 49890210 -149739940 + MLT1A1 LTR MaLR 3 396 0 510 258 79 57 chr5 49890213 49890442 -149739708 + L2 LINE L2 3057 3290 -23 465 82 0 0 chr5 49891010 49891083 -149739067 + Alu SINE Alu 239 311 0 690 285 43 41 chr5 49891448 49891780 -149738370 + LTR16A LTR ERVL 1 332 -118 210 264 38 0 chr5 49892933 49892986 -149737164 - L3b LINE CR1 -222 1361 1307 286 207 66 41 chr5 49894208 49894329 -149735821 + L1ME4a LINE L1 5841 5964 -157 1661 194 10 0 chr5 49894577 49894886 -149735264 + AluJb SINE Alu 1 312 0 24 53 0 0 chr5 49895916 49895954 -149734196 + AT_rich Low_complexity Low_complexity 1 38 0 925 298 80 71 chr5 49896226 49896877 -149733273 + L2 LINE L2 2267 2923 -391 1197 306 71 25 chr5 49897412 49898358 -149731792 - L2 LINE L2 -17 3296 2307 21 71 0 0 chr5 49903817 49903859 -149726291 + AT_rich Low_complexity Low_complexity 1 42 0 3313 147 75 8 chr5 49904004 49904602 -149725548 - L1MC1 LINE L1 -13 6320 5683 184 224 0 41 chr5 49904894 49904943 -149725207 + MIR SINE MIR 124 170 -92 349 308 28 0 chr5 49904988 49905095 -149725055 - MIR SINE MIR -69 193 84 251 346 0 0 chr5 49905145 49905252 -149724898 + MIR SINE MIR 156 262 0 265 316 115 13 chr5 49905255 49905437 -149724713 - MIR SINE MIR -28 234 32 2464 74 0 0 chr5 49905944 49906254 -149723896 - AluY SINE Alu -1 310 1 619 247 45 39 chr5 49906848 49907026 -149723124 - MER97a DNA MER1_type? -715 179 1 483 274 29 86 chr5 49907123 49907368 -149722782 + L2 LINE L2 3077 3307 -6 210 297 60 77 chr5 49907499 49907681 -149722469 - L2 LINE L2 -24 3289 3111 1952 94 0 21 chr5 49907731 49908019 -149722131 - L1P LINE L1 -2103 4043 3762 6748 62 5 21 chr5 49908021 49908815 -149721335 + L1PA8 LINE L1 4697 5457 -715 2085 122 7 3 chr5 49908815 49909110 -149721040 + AluSg SINE Alu 1 296 -14 6748 62 5 21 chr5 49909110 49909815 -149720335 + L1PA8 LINE L1 5457 6172 0 374 183 65 0 chr5 49910683 49910776 -149719374 - L1MA8 LINE L1 -7 6284 6186 816 174 0 0 chr5 49912020 49912152 -149717998 - AluSg/x SINE Alu -39 273 142 333 82 0 0 chr5 49912590 49912639 -149717511 + (ATG)n Simple_repeat Simple_repeat 3 51 0 225 307 164 36 chr5 49912730 49912870 -149717280 - MIR3 SINE MIR 0 208 51 234 148 37 19 chr5 49913014 49913068 -149717082 + GA-rich Low_complexity Low_complexity 2 56 0 459 267 74 92 chr5 49913553 49913770 -149716380 + MLT1L LTR MaLR 277 546 -22 237 159 0 0 chr5 49914620 49914664 -149715486 + A-rich Low_complexity Low_complexity 1 44 0 1498 317 81 2 chr5 49914776 49915281 -149714869 + MLT1H1 LTR MaLR 3 547 -8 372 309 15 0 chr5 49915285 49915421 -149714729 + L1MC/D LINE L1 5673 5810 -1998 14892 46 3 0 chr5 49915509 49921511 -149708639 + L1PA4 LINE L1 1 6155 0 1928 248 58 52 chr5 49921514 49922851 -149707299 + L1M2 LINE L1 2558 3817 -3748 14892 41 3 1 chr5 49922952 49928286 -149701864 + L1PA4 LINE L1 676 6152 -3 402 308 69 52 chr5 49929104 49929526 -149700624 - L1M4 LINE L1 -2391 3755 3327 330 278 156 0 chr5 49929597 49929777 -149700373 - L1M4 LINE L1 -2970 3176 2969 24 53 0 0 chr5 49930118 49930156 -149699994 + AT_rich Low_complexity Low_complexity 1 38 0 390 321 127 6 chr5 49931272 49931437 -149698713 + MIR SINE MIR 75 259 -3 23 33 0 0 chr5 49931468 49931498 -149698652 + AT_rich Low_complexity Low_complexity 1 30 0 1625 148 78 31 chr5 49932535 49932893 -149697257 + THE1C LTR MaLR 1 375 0 35 54 0 0 chr5 49933477 49933533 -149696617 + AT_rich Low_complexity Low_complexity 1 56 0 39 22 0 0 chr5 49934714 49934760 -149695390 + AT_rich Low_complexity Low_complexity 1 46 0 1267 196 37 43 chr5 49934777 49935103 -149695047 - MER33 DNA MER1_type 0 324 1 325 322 166 24 chr5 49935970 49936181 -149693969 + MIR SINE MIR 18 258 -4 484 333 65 84 chr5 49936256 49936718 -149693432 - L2 LINE L2 0 3272 2820 444 325 110 5 chr5 49938676 49938885 -149691265 + MIR SINE MIR 15 245 -17 208 227 0 0 chr5 49938903 49938947 -149691203 + (CTA)n Simple_repeat Simple_repeat 3 46 0 420 272 84 108 chr5 49938977 49939593 -149690557 - L3 LINE CR1 -15 1562 898 445 333 126 22 chr5 49939672 49939942 -149690208 - L3 LINE CR1 -903 674 377 224 351 0 13 chr5 49940922 49940999 -149689151 - L2 LINE L2 -212 3060 2985 517 296 88 21 chr5 49942701 49942950 -149687200 - MIR SINE MIR -1 261 3 335 71 0 18 chr5 49943528 49943584 -149686566 + (TG)n Simple_repeat Simple_repeat 2 56 0 2305 107 7 0 chr5 49944538 49944848 -149685302 + AluSx SINE Alu 1 312 0 1924 137 14 0 chr5 49946409 49946702 -149683448 + AluSx SINE Alu 1 297 -15 213 65 0 0 chr5 49946769 49946800 -149683350 + (TAAAA)n Simple_repeat Simple_repeat 1 31 0 21 82 0 0 chr5 49947107 49947156 -149682994 + AT_rich Low_complexity Low_complexity 1 49 0 41 36 0 0 chr5 49949631 49949686 -149680464 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr5 49951511 49951532 -149678618 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 49951582 49951603 -149678547 + AT_rich Low_complexity Low_complexity 1 21 0 364 392 34 13 chr5 49951670 49951907 -149678243 - L3 LINE CR1 -11 1566 1325 889 214 12 0 chr5 49952112 49952285 -149677865 - FAM SINE Alu 0 175 1 1758 168 3 7 chr5 49952319 49952605 -149677545 + AluJb SINE Alu 1 285 -27 185 0 40 0 chr5 49952623 49952648 -149677502 + (CAA)n Simple_repeat Simple_repeat 2 27 0 312 260 73 24 chr5 49952728 49952851 -149677299 - MIR SINE MIR -133 129 1 256 300 39 46 chr5 49952916 49953046 -149677104 - L2 LINE L2 -653 2661 2533 194 207 17 0 chr5 49953069 49953127 -149677023 + CT-rich Low_complexity Low_complexity 3 61 0 553 325 93 26 chr5 49953177 49953488 -149676662 - L3 LINE CR1 -889 688 357 560 315 107 49 chr5 49954816 49955151 -149674999 + L2 LINE L2 1386 1769 -1545 7390 33 4 1 chr5 49955151 49956736 -149673414 - L1PA4 LINE L1 0 6155 4565 560 315 107 49 chr5 49956736 49956972 -149673178 + L2 LINE L2 1769 1990 -1324 640 329 178 28 chr5 49957214 49958149 -149672001 + L2 LINE L2 2037 3115 -198 889 127 0 7 chr5 49958171 49958313 -149671837 - L1PA15 LINE L1 -1 6164 6024 6949 62 8 0 chr5 49958317 49959968 -149670182 - L1PA8 LINE L1 0 6172 4505 479 185 0 0 chr5 49959968 49960049 -149670101 - L1PA15 LINE L1 -126 6039 5959 362 301 41 55 chr5 49960103 49960249 -149669901 + L2 LINE L2 3168 3311 -2 379 249 34 126 chr5 49960484 49960929 -149669221 - L1ME LINE L1 -5147 923 520 234 265 82 31 chr5 49961166 49961264 -149668886 - L1ME LINE L1 -5582 488 386 240 258 62 31 chr5 49961466 49961563 -149668587 - L1ME LINE L1 -5901 169 70 2053 118 3 3 chr5 49961735 49962032 -149668118 - AluSp SINE Alu -16 297 1 629 268 19 24 chr5 49962085 49962294 -149667856 + MER46C DNA MER2_type 124 331 -7 960 215 19 63 chr5 49963582 49963852 -149666298 - MIR SINE MIR 0 262 5 196 325 78 39 chr5 49964923 49965129 -149665021 - L2 LINE L2 -844 2470 2257 1952 171 5 60 chr5 49965153 49965567 -149664583 - MLT2C1 LTR ERVL 0 397 7 486 306 118 18 chr5 49965621 49965850 -149664300 + MIR SINE MIR 6 257 -5 666 70 0 0 chr5 49966258 49966344 -149663806 - L1PA7 LINE L1 -9 6145 6060 351 0 0 0 chr5 49967828 49967867 -149662283 + (TA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr5 49968274 49968304 -149661846 + AT_rich Low_complexity Low_complexity 1 30 0 336 304 155 5 chr5 49969463 49969657 -149660493 + MIR SINE MIR 23 245 -17 2268 98 0 13 chr5 49971273 49971578 -149658572 - AluSx SINE Alu -11 301 1 1926 92 60 14 chr5 49971763 49972046 -149658104 - AluSq SINE Alu -17 296 1 386 248 114 0 chr5 49972128 49972233 -149657917 - MIR3 SINE MIR -5 203 87 2095 115 6 19 chr5 49972457 49972770 -149657380 - AluSq SINE Alu -4 309 1 2147 116 10 3 chr5 49975141 49975443 -149654707 - AluSq SINE Alu -9 304 1 836 52 0 0 chr5 49976376 49976473 -149653677 - AluY SINE Alu -18 293 197 2327 89 3 10 chr5 49976473 49976777 -149653373 - AluY SINE Alu -8 303 2 353 370 27 0 chr5 49976974 49977120 -149653030 - MIR SINE MIR -6 256 107 311 255 104 19 chr5 49977403 49977509 -149652641 + MIR SINE MIR 56 170 -92 290 246 286 35 chr5 49978230 49978429 -149651721 + L3 LINE CR1 254 502 -1075 868 98 15 30 chr5 49978447 49978580 -149651570 - FLAM_C SINE Alu 0 133 3 32 81 0 0 chr5 49980361 49980435 -149649715 + AT_rich Low_complexity Low_complexity 1 74 0 368 335 147 42 chr5 49981743 49981782 -149648368 - L2 LINE L2 -36 3277 3244 356 59 20 0 chr5 49981782 49981833 -149648317 + (CA)n Simple_repeat Simple_repeat 2 53 0 368 335 147 42 chr5 49981833 49982351 -149647799 - L2 LINE L2 -69 3244 2660 783 254 80 31 chr5 49982357 49982647 -149647503 - MLT1F LTR MaLR -2 553 258 200 269 19 19 chr5 49983174 49983278 -149646872 + (TTAA)n Simple_repeat Simple_repeat 2 105 0 297 247 108 21 chr5 49983724 49983817 -149646333 - MLT1J2 LTR MaLR -302 148 48 1299 221 126 56 chr5 49984213 49984243 -149645907 - MLT1E2 LTR MaLR 0 626 600 2461 129 16 16 chr5 49984243 49984607 -149645543 - THE1B LTR MaLR 0 364 1 1299 221 126 56 chr5 49984607 49985111 -149645039 - MLT1E2 LTR MaLR -26 600 19 4897 47 9 26 chr5 49986060 49986742 -149643408 - L1P LINE L1 -914 5232 4563 567 323 187 29 chr5 49987281 49988173 -149641977 + L2 LINE L2 2037 3074 -239 937 128 0 7 chr5 49988238 49988379 -149641771 - L1PA15 LINE L1 -2 6163 6024 3007 117 25 10 chr5 49988383 49988863 -149641287 - L1PA8 LINE L1 0 6172 5686 1347 209 70 19 chr5 49989102 49989461 -149640689 + L1ME1 LINE L1 4890 5266 -880 1890 85 0 12 chr5 49989474 49989720 -149640430 + AluY SINE Alu 56 298 -13 2303 96 3 3 chr5 49989723 49990024 -149640126 + AluSx SINE Alu 3 303 -9 2844 216 51 16 chr5 49990046 49990735 -149639415 + L1ME1 LINE L1 5449 6161 -5 539 243 41 83 chr5 49990990 49991159 -149638991 + MER58A DNA MER1_type 24 185 -39 23959 55 2 2 chr5 49991383 49994426 -149635724 + L1P LINE L1 2170 5213 -933 456 163 23 0 chr5 49994633 49994762 -149635388 + (TA)n Simple_repeat Simple_repeat 2 133 0 271 235 0 78 chr5 49994764 49994866 -149635284 - L1MC4 LINE L1 -1335 6707 6614 254 311 0 0 chr5 49994862 49994952 -149635198 + L1MC4 LINE L1 6614 6703 -1339 * 239 322 0 0 chr5 49994904 49994994 -149635156 - L1MC4 LINE L1 -1339 6703 6614 * 302 304 94 7 chr5 49995670 49995808 -149634342 + L1MDa LINE L1 2449 2598 -3942 7282 62 0 5 chr5 49996111 49997482 -149632668 - L1PA7 LINE L1 -2 6152 4783 329 278 58 37 chr5 49997618 49997809 -149632341 - HAL1 LINE L1 -884 1623 1429 937 91 8 0 chr5 49997949 49998070 -149632080 - AluSp SINE Alu -181 132 11 974 212 38 5 chr5 49998746 49998958 -149631192 + MER58A DNA MER1_type 6 224 0 1927 111 8 0 chr5 49999594 49999855 -149630295 + AluSg SINE Alu 31 293 -17 324 70 0 0 chr5 49999855 49999898 -149630252 + (TA)n Simple_repeat Simple_repeat 1 43 0 204 167 24 0 chr5 50000042 50000084 -149630066 + T-rich Low_complexity Low_complexity 4 46 0 198 0 0 0 chr5 50000581 50000603 -149629547 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 440 317 0 73 chr5 50000647 50000852 -149629298 - MIR3 SINE MIR -3 205 16 223 125 50 0 chr5 50001687 50001727 -149628423 + (CATA)n Simple_repeat Simple_repeat 3 44 0 2049 73 11 18 chr5 50004108 50004380 -149625770 - AluY SINE Alu -41 270 1 2246 77 24 0 chr5 50004446 50004733 -149625417 - AluY SINE Alu -9 302 9 963 268 80 31 chr5 50004811 50005262 -149624888 + L2 LINE L2 2818 3290 -23 2227 74 0 0 chr5 50005378 50005648 -149624502 + AluSx SINE Alu 31 300 -12 677 71 12 0 chr5 50006033 50006117 -149624033 + AluS SINE Alu 1 85 -227 1251 58 58 0 chr5 50006117 50006273 -149623877 + AluY SINE Alu 134 298 -13 2052 142 0 7 chr5 50006456 50006759 -149623391 + AluSx SINE Alu 1 301 -11 1547 175 18 14 chr5 50009734 50010020 -149620130 - AluJb SINE Alu -25 287 1 603 86 0 0 chr5 50011382 50011463 -149618687 + L1PA5 LINE L1 6074 6154 0 1575 175 35 7 chr5 50012712 50012997 -149617153 - AluJb SINE Alu -19 293 1 180 125 0 0 chr5 50013137 50013169 -149616981 + (GAAA)n Simple_repeat Simple_repeat 3 34 0 1794 146 26 79 chr5 50013313 50013495 -149616655 - L1MA5 LINE L1 0 6300 6110 2008 113 25 0 chr5 50013495 50013827 -149616323 + AluSg SINE Alu 1 339 0 1794 146 26 79 chr5 50013827 50014059 -149616091 - L1MA5 LINE L1 -190 6110 5906 3711 127 45 25 chr5 50014380 50015157 -149614993 - L1PA12 LINE L1 -295 5873 5077 746 261 55 21 chr5 50015286 50015524 -149614626 - MIR SINE MIR -12 250 5 544 163 12 4 chr5 50016611 50016706 -149613444 + MLT1A1 LTR MaLR 1 96 -278 1470 209 32 90 chr5 50016714 50017091 -149613059 + MLT1A1 LTR MaLR 11 365 0 809 226 71 31 chr5 50017115 50017341 -149612809 + MLT1A1 LTR MaLR 122 356 -9 448 287 27 13 chr5 50017419 50017569 -149612581 + MIR SINE MIR 110 261 -1 762 237 84 17 chr5 50018377 50019068 -149611082 - L1ME2 LINE L1 0 6164 5428 2516 70 0 0 chr5 50019333 50019632 -149610518 - AluY SINE Alu -12 299 1 23 0 0 0 chr5 50019721 50019744 -149610406 + AT_rich Low_complexity Low_complexity 1 23 0 1945 121 104 27 chr5 50019886 50020224 -149609926 - THE1B LTR MaLR 0 364 1 673 158 85 28 chr5 50020296 50020473 -149609677 + MER53 DNA DNA 2 188 -1 961 119 5 133 chr5 50020666 50020884 -149609266 - MLT1B LTR MaLR -2 388 199 304 284 74 0 chr5 50021173 50021268 -149608882 + L2 LINE L2 3204 3305 -8 23 0 0 0 chr5 50021270 50021293 -149608857 + AT_rich Low_complexity Low_complexity 1 23 0 696 83 57 6 chr5 50022359 50022516 -149607634 + (TCTA)n Simple_repeat Simple_repeat 2 166 0 279 122 0 0 chr5 50022735 50022784 -149607366 + (TG)n Simple_repeat Simple_repeat 2 50 0 253 197 30 15 chr5 50023785 50023851 -149606299 + CT-rich Low_complexity Low_complexity 1 67 0 2155 169 38 38 chr5 50024300 50024726 -149605424 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr5 50024739 50024761 -149605389 + AT_rich Low_complexity Low_complexity 1 22 0 2203 94 42 0 chr5 50024812 50025100 -149605050 + AluSx SINE Alu 1 300 -12 11643 149 32 35 chr5 50027153 50029277 -149600873 + Tigger1 DNA MER2_type 2 2119 -299 14576 45 5 2 chr5 50029381 50035389 -149594761 - L1PA3 LINE L1 -4 6151 1 232 320 20 0 chr5 50035477 50035577 -149594573 - L1MC/D LINE L1 -1998 5810 5709 231 194 45 30 chr5 50035710 50035777 -149594373 - LTR16A1 LTR ERVL -2 455 388 208 282 28 0 chr5 50035792 50035863 -149594287 + A-rich Low_complexity Low_complexity 4 76 0 204 40 0 0 chr5 50036090 50036115 -149594035 + (CAG)n Simple_repeat Simple_repeat 2 26 0 435 272 75 71 chr5 50037003 50037297 -149592853 - L1MEd LINE L1 -4918 1201 907 560 244 26 0 chr5 50039234 50039503 -149590647 + L1ME1 LINE L1 5812 6157 -9 28 0 0 0 chr5 50039505 50039533 -149590617 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr5 50040129 50040152 -149589998 + (A)n Simple_repeat Simple_repeat 1 23 0 268 288 8 68 chr5 50040558 50040676 -149589474 + L2 LINE L2 3203 3313 0 2116 8 0 8 chr5 50040700 50040936 -149589214 - AluY SINE Alu -8 303 70 332 295 47 78 chr5 50041490 50041683 -149588467 + HAL1 LINE L1 39 225 -2282 5303 226 43 13 chr5 50041683 50043541 -149586609 - L1MC/D LINE L1 -706 5627 3713 1866 293 113 65 chr5 50043535 50045298 -149584852 + HAL1 LINE L1 213 2060 -447 * 1412 215 7 23 chr5 50145507 50145809 -149484341 - AluJo SINE Alu -10 302 6 311 0 26 0 chr5 50146513 50146552 -149483598 + (CA)n Simple_repeat Simple_repeat 2 41 0 440 300 123 62 chr5 50146612 50147175 -149482975 - L1M4 LINE L1 -1302 4844 4248 256 284 81 56 chr5 50147236 50147433 -149482717 - L1M4 LINE L1 -1998 4148 3947 262 119 0 68 chr5 50147452 50147511 -149482639 + MLT1A1 LTR MaLR 295 349 -16 185 236 16 163 chr5 50149076 50149199 -149480951 - L2 LINE L2 -33 3280 3176 180 0 0 0 chr5 50149302 50149322 -149480828 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 1181 139 4 69 chr5 50149333 50149440 -149480710 + MER50 LTR ERV1 472 584 -150 2618 3 3 7 chr5 50149440 50149736 -149480414 - AluYa5 SINE Alu -16 295 1 1181 139 4 69 chr5 50149736 50149873 -149480277 + MER50 LTR ERV1 584 700 -34 312 330 140 48 chr5 50150297 50150655 -149479495 - LTR33A LTR ERVL -103 420 30 683 102 37 9 chr5 50150733 50150841 -149479309 - MSTB LTR MaLR -11 415 305 409 326 87 0 chr5 50151168 50151352 -149478798 - MIR SINE MIR -60 202 3 256 329 65 52 chr5 50151713 50151944 -149478206 - L2 LINE L2 -1209 2105 1872 1056 232 15 126 chr5 50151983 50152380 -149477770 - MLT1A2 LTR MaLR 0 374 22 269 348 11 0 chr5 50152440 50152532 -149477618 - L2 LINE L2 -1522 1792 1700 388 204 97 26 chr5 50152790 50152903 -149477247 + MIR SINE MIR 37 157 -105 1176 125 45 40 chr5 50153021 50153221 -149476929 - MLT1A1 LTR MaLR -164 201 1 200 313 96 43 chr5 50153630 50153745 -149476405 - L2 LINE L2 -5 3308 3188 2160 110 3 0 chr5 50154087 50154388 -149475762 - AluSg SINE Alu -8 302 1 1977 140 14 49 chr5 50154482 50154832 -149475318 + MER7A DNA MER2_type 2 337 -9 324 83 0 0 chr5 50155031 50155079 -149475071 + (TG)n Simple_repeat Simple_repeat 2 49 0 189 147 0 0 chr5 50156206 50156240 -149473910 + (T)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr5 50156341 50156369 -149473781 + AT_rich Low_complexity Low_complexity 1 28 0 2146 124 0 0 chr5 50157358 50157657 -149472493 + AluSq SINE Alu 1 299 -14 252 221 151 12 chr5 50159181 50159267 -149470883 + MER46C DNA MER2_type 16 113 -225 1285 200 85 7 chr5 50159368 50159638 -149470512 - MSTA LTR MaLR -137 291 1 330 351 30 12 chr5 50160980 50161145 -149469005 - L2 LINE L2 -865 2449 2282 2109 124 0 9 chr5 50161901 50162216 -149467934 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 50163436 50163460 -149466690 + AT_rich Low_complexity Low_complexity 1 24 0 631 143 8 63 chr5 50163460 50163586 -149466564 - L1PB3 LINE L1 -2 6152 6034 236 242 61 0 chr5 50164324 50164390 -149465760 - MIR SINE MIR -89 173 104 1525 268 25 44 chr5 50164835 50165277 -149464873 - LTR40a LTR ERVL -11 508 75 1785 128 37 4 chr5 50165277 50165608 -149464542 - AluSg SINE Alu 0 340 1 1525 268 25 44 chr5 50165608 50165682 -149464468 - LTR40a LTR ERVL -444 75 1 207 263 202 20 chr5 50166247 50166346 -149463804 - MIR SINE MIR -76 132 16 21 0 0 0 chr5 50166807 50166828 -149463322 + AT_rich Low_complexity Low_complexity 1 21 0 200 392 39 0 chr5 50167444 50167546 -149462604 - MIR SINE MIR -70 192 87 8869 83 3 1 chr5 50167973 50169661 -149460489 - L1PA7 LINE L1 -319 5835 4143 180 333 0 0 chr5 50169768 50169828 -149460322 - MIR SINE MIR -2 260 201 12103 139 16 16 chr5 50171091 50173079 -149457071 + Tigger1 DNA MER2_type 2 1988 -430 1710 69 0 0 chr5 50173180 50173398 -149456752 + L1PA7 LINE L1 5933 6150 -4 180 111 0 0 chr5 50174248 50174275 -149455875 + (A)n Simple_repeat Simple_repeat 1 27 0 23 68 0 0 chr5 50175075 50175119 -149455031 + AT_rich Low_complexity Low_complexity 1 44 0 24 32 0 0 chr5 50175169 50175200 -149454950 + AT_rich Low_complexity Low_complexity 1 31 0 29 60 0 0 chr5 50175439 50175489 -149454661 + AT_rich Low_complexity Low_complexity 1 50 0 1790 158 71 11 chr5 50177380 50177734 -149452416 + THE1C LTR MaLR 1 375 0 441 258 92 0 chr5 50178058 50178178 -149451972 - MER46C DNA MER2_type -8 330 200 2110 146 62 42 chr5 50178217 50178407 -149451743 + L1MA9 LINE L1 5871 6056 -256 1080 216 52 104 chr5 50178407 50178792 -149451358 + MLT1A1 LTR MaLR 1 365 0 2110 146 62 42 chr5 50178792 50179034 -149451116 + L1MA9 LINE L1 6056 6312 0 391 58 0 0 chr5 50179223 50179275 -149450875 + HERV17 LTR ERV1 998 1049 -7577 * 1714 110 14 29 chr5 50179262 50179667 -149450483 + HERV17 LTR ERV1 1275 1720 -5176 * 4729 90 2 0 chr5 50179662 50180304 -149449846 + HERV17 LTR ERV1 7757 8399 0 1335 58 246 0 chr5 50180304 50180511 -149449639 + LTR12 LTR ERV1 1 258 -456 357 265 17 0 chr5 50180511 50180628 -149449522 + LTR30 LTR ERV1 524 642 -80 1813 74 6 2 chr5 50180629 50180879 -149449271 + LTR12 LTR ERV1 375 714 0 2216 124 27 16 chr5 50181816 50182187 -149447963 + THE1C LTR MaLR 1 375 0 281 277 80 0 chr5 50182335 50182447 -149447703 + MLT1J LTR MaLR 385 505 -6 385 314 13 19 chr5 50182645 50182804 -149447346 + L1MEd LINE L1 9 166 -5953 270 270 0 14 chr5 50183801 50183875 -149446275 - L2 LINE L2 -1052 2262 2190 26 50 0 0 chr5 50185921 50185961 -149444189 + AT_rich Low_complexity Low_complexity 1 40 0 368 260 130 32 chr5 50186125 50186279 -149443871 + MIR SINE MIR 67 235 -27 194 182 0 0 chr5 50186280 50186313 -149443837 - MIR SINE MIR -2 260 228 1208 120 11 11 chr5 50186614 50186798 -149443352 - Charlie3 DNA MER1_type -12 2698 2515 225 159 0 0 chr5 50189764 50189808 -149440342 + (CA)n Simple_repeat Simple_repeat 2 45 0 218 288 65 72 chr5 50189816 50189969 -149440181 + L2 LINE L2 2127 2278 -1036 2781 228 32 25 chr5 50190519 50191237 -149438913 - L1ME1 LINE L1 -47 6188 5466 5963 156 66 9 chr5 50191449 50192612 -149437538 + Tigger3b DNA MER2_type 1 1230 -1 421 339 70 4 chr5 50192613 50192843 -149437307 - MIR SINE MIR -2 260 16 207 316 70 0 chr5 50192854 50192911 -149437239 - L2 LINE L2 -5 3267 3207 485 264 36 6 chr5 50193176 50193343 -149436807 - L1ME1 LINE L1 -2683 3532 3361 283 258 22 118 chr5 50193329 50193507 -149436643 - L1ME1 LINE L1 -6198 198 38 * 1380 175 131 0 chr5 50194590 50194887 -149435263 + MER1B DNA MER1_type 2 337 0 1926 158 57 8 chr5 50196353 50196739 -149433411 + L1MA6 LINE L1 5883 6287 -13 768 171 40 0 chr5 50196766 50196941 -149433209 + L1MA8 LINE L1 6106 6287 -4 2199 104 3 0 chr5 50196943 50197241 -149432909 + AluSp SINE Alu 1 299 -14 24 32 0 0 chr5 50197322 50197353 -149432797 + AT_rich Low_complexity Low_complexity 1 31 0 29 47 0 0 chr5 50198913 50198956 -149431194 + AT_rich Low_complexity Low_complexity 1 43 0 4240 189 46 55 chr5 50200010 50200560 -149429590 - Charlie1a DNA MER1_type -1306 1455 901 3690 145 17 0 chr5 50200560 50201153 -149428997 + LTR26 LTR ERV1 1 603 0 4240 189 46 55 chr5 50201153 50201858 -149428292 - Charlie1a DNA MER1_type -1860 901 164 414 244 118 0 chr5 50201848 50201975 -149428175 - Charlie1a DNA MER1_type -1312 143 2 * 634 329 70 0 chr5 50202454 50202697 -149427453 - MIR SINE MIR 0 262 3 436 133 133 24 chr5 50203204 50203287 -149426863 + MLT1B LTR MaLR 4 95 -295 3668 104 39 83 chr5 50203605 50204300 -149425850 - MER4A LTR ERV1 0 664 1 2052 198 24 0 chr5 50204300 50204679 -149425471 + L1M2 LINE L1 8 395 -6454 1103 159 46 102 chr5 50204679 50205053 -149425097 + L1MB8 LINE L1 5878 6162 -16 5528 40 1 3 chr5 50205330 50206007 -149424143 + L1PA5 LINE L1 5477 6152 -2 25 0 0 0 chr5 50206262 50206287 -149423863 + AT_rich Low_complexity Low_complexity 1 25 0 1970 116 0 33 chr5 50207125 50207427 -149422723 - AluSx SINE Alu -20 292 1 669 345 34 0 chr5 50208013 50208251 -149421899 + MIR SINE MIR 17 262 0 347 336 0 33 chr5 50208351 50208473 -149421677 + L2 LINE L2 3155 3272 0 223 230 115 53 chr5 50208811 50208924 -149421226 - MIR SINE MIR -70 192 73 357 277 223 5 chr5 50208938 50209144 -149421006 - MIR SINE MIR -2 260 10 32 43 0 0 chr5 50209888 50209934 -149420216 + AT_rich Low_complexity Low_complexity 1 46 0 328 325 35 0 chr5 50210248 50210362 -149419788 - MIR SINE MIR -99 163 46 294 224 0 26 chr5 50211130 50211206 -149418944 - MIR SINE MIR -3 259 186 424 144 0 113 chr5 50211210 50211307 -149418843 - L1MC4 LINE L1 -1 8041 7956 315 221 35 21 chr5 50211365 50211510 -149418640 + (TA)n Simple_repeat Simple_repeat 1 147 0 189 0 0 0 chr5 50211567 50211588 -149418562 + (TA)n Simple_repeat Simple_repeat 2 22 0 310 204 80 45 chr5 50211588 50211676 -149418474 - L1MC4 LINE L1 -1339 6703 6613 316 198 8 8 chr5 50211761 50211882 -149418268 + (TA)n Simple_repeat Simple_repeat 2 122 0 1804 271 44 17 chr5 50211979 50212613 -149417537 - L1MC4 LINE L1 -461 7581 6931 391 348 49 44 chr5 50212870 50213074 -149417076 - MIR SINE MIR -57 205 1 2351 62 0 0 chr5 50213808 50214099 -149416051 - AluY SINE Alu 0 311 21 207 100 0 0 chr5 50214972 50215002 -149415148 + (T)n Simple_repeat Simple_repeat 1 30 0 850 166 31 26 chr5 50215160 50215353 -149414797 + MER4C LTR ERV1 269 462 -3 1249 300 42 5 chr5 50215355 50215738 -149414412 - MLT1G LTR MaLR -193 397 1 267 321 97 72 chr5 50216818 50217055 -149413095 - L3 LINE CR1 -1 1576 1334 996 291 98 14 chr5 50217212 50217570 -149412580 - LTR16C LTR ERVL -2 489 102 5524 147 9 9 chr5 50218110 50219013 -149411137 - MER4D LTR ERV1 0 903 1 2218 245 40 37 chr5 50219190 50219864 -149410286 + LTR8 LTR ERV1 16 691 0 188 302 14 86 chr5 50220547 50220686 -149409464 + MER5A DNA MER1_type 61 189 0 824 181 13 13 chr5 50221040 50221195 -149408955 + MLT1D LTR MaLR 1 155 -350 555 298 63 30 chr5 50221576 50221878 -149408272 - MLT1L LTR MaLR -43 572 261 338 336 45 85 chr5 50222583 50222962 -149407188 + L2 LINE L2 2356 2706 -608 1742 130 75 39 chr5 50222962 50223324 -149406826 - THE1C LTR MaLR 0 375 1 338 336 45 85 chr5 50223324 50223506 -149406644 + L2 LINE L2 2706 2894 -420 25 0 0 0 chr5 50223696 50223721 -149406429 + AT_rich Low_complexity Low_complexity 1 25 0 2522 138 19 5 chr5 50224733 50225159 -149404991 + L1MA5A LINE L1 5858 6289 -8 279 274 0 32 chr5 50226267 50226329 -149403821 + MIR SINE MIR 16 75 -133 193 328 16 0 chr5 50226483 50226547 -149403603 + MER5B DNA MER1_type 90 154 -24 188 402 71 0 chr5 50227081 50227208 -149402942 + L2 LINE L2 3136 3271 -1 249 196 0 0 chr5 50227234 50227285 -149402865 + (CACCAT)n Simple_repeat Simple_repeat 4 54 0 413 297 34 57 chr5 50227300 50227509 -149402641 - MIR SINE MIR -56 206 3 476 289 46 112 chr5 50228114 50228373 -149401777 - MIR SINE MIR -11 251 2 376 329 85 68 chr5 50228391 50228686 -149401464 + L2 LINE L2 2932 3231 -41 276 262 0 87 chr5 50228841 50228990 -149401160 - L1MC4 LINE L1 -15 8027 7892 2105 216 92 73 chr5 50229065 50229972 -149400178 - L1MC4 LINE L1 -161 7881 6958 237 281 214 0 chr5 50230136 50230225 -149399925 - MER63A DNA MER1_type 0 210 103 23 54 0 0 chr5 50231319 50231356 -149398794 + AT_rich Low_complexity Low_complexity 1 37 0 734 60 10 0 chr5 50234716 50234816 -149395334 + (TTCC)n Simple_repeat Simple_repeat 4 104 0 527 97 0 0 chr5 50234816 50234888 -149395262 - AluS SINE Alu -241 72 1 394 244 96 15 chr5 50235624 50235759 -149394391 + MER20B DNA MER1_type 2 147 -636 294 346 44 13 chr5 50235916 50236075 -149394075 + LTR16C LTR ERVL 212 375 -116 1098 219 0 9 chr5 50236240 50236455 -149393695 - AluJb SINE Alu -13 299 87 223 289 26 0 chr5 50236895 50236971 -149393179 - L2 LINE L2 -194 3078 3001 310 305 135 7 chr5 50237260 50237401 -149392749 - L2 LINE L2 0 3313 3155 475 337 107 63 chr5 50237591 50237949 -149392201 - L2 LINE L2 -609 2705 2364 2164 108 0 41 chr5 50237949 50238263 -149391887 - AluSx SINE Alu -11 301 1 475 337 107 63 chr5 50238263 50238587 -149391563 - L2 LINE L2 -950 2364 1993 5833 93 6 11 chr5 50238705 50239520 -149390630 - HERV9 LTR ERV1 -3509 4890 4080 20563 97 11 12 chr5 50239527 50242460 -149387690 - HERV9 LTR ERV1 -5260 3139 210 3005 57 186 175 chr5 50242454 50243144 -149387006 - LTR12 LTR ERV1 -17 697 1 * 507 309 53 11 chr5 50243150 50243338 -149386812 - MIR SINE MIR -49 213 18 1441 201 25 32 chr5 50243521 50243835 -149386315 - AluJb SINE Alu 0 312 1 50 31 0 0 chr5 50244369 50244433 -149385717 + AT_rich Low_complexity Low_complexity 1 64 0 562 308 32 18 chr5 50245405 50245684 -149384466 - L1MC4a LINE L1 -1927 5881 5599 190 221 0 65 chr5 50246044 50246121 -149384029 - L2 LINE L2 -126 3187 3116 1135 316 34 12 chr5 50246184 50246602 -149383548 + LTR16A LTR ERVL 16 442 -8 858 159 8 5 chr5 50247024 50247174 -149382976 - MLT1A1 LTR MaLR 0 365 232 32 67 0 0 chr5 50248905 50248965 -149381185 + AT_rich Low_complexity Low_complexity 1 60 0 413 365 41 14 chr5 50251689 50251834 -149378316 - MER91A DNA MER1_type -44 152 4 195 409 50 15 chr5 50251849 50252047 -149378103 - L2 LINE L2 -856 2458 2254 1226 191 138 3 chr5 50252307 50252627 -149377523 + MLT1A1 LTR MaLR 3 365 0 1256 275 124 43 chr5 50253065 50253568 -149376582 + MLT1F LTR MaLR 1 593 0 2297 138 23 23 chr5 50253762 50254191 -149375959 - L1MA7 LINE L1 0 6291 5863 219 279 0 58 chr5 50254498 50254584 -149375566 + CT-rich Low_complexity Low_complexity 2 82 0 242 193 18 0 chr5 50254879 50254936 -149375214 + (CA)n Simple_repeat Simple_repeat 2 59 0 274 339 52 0 chr5 50256327 50256442 -149373708 - MIR3 SINE MIR -7 201 81 427 302 73 24 chr5 50256629 50256877 -149373273 + MIR SINE MIR 3 262 0 835 235 80 0 chr5 50258344 50258595 -149371555 + L1MCb LINE L1 813 1083 -4962 1240 142 52 9 chr5 50258599 50258831 -149371319 - MER46B DNA MER2_type -9 227 111 318 195 23 11 chr5 50258873 50258960 -149371190 + L1MCb LINE L1 1082 1169 -5395 1939 213 36 7 chr5 50258961 50259378 -149370772 - L1MB8 LINE L1 -329 5849 5421 1807 240 111 36 chr5 50259425 50260754 -149369396 + L1MCb LINE L1 1163 2616 -3948 27 73 0 0 chr5 50262637 50262692 -149367458 + AT_rich Low_complexity Low_complexity 1 55 0 297 0 0 0 chr5 50263385 50263418 -149366732 + (CA)n Simple_repeat Simple_repeat 2 34 0 33 56 0 0 chr5 50264513 50264567 -149365583 + AT_rich Low_complexity Low_complexity 1 54 0 221 364 118 27 chr5 50265555 50265929 -149364221 - L2 LINE L2 -927 2387 1980 345 115 0 0 chr5 50266349 50266401 -149363749 + MADE1 DNA Mariner 2 53 -27 23 54 0 0 chr5 50266449 50266486 -149363664 + AT_rich Low_complexity Low_complexity 1 37 0 23545 39 2 1 chr5 50266590 50270278 -149359872 - L1PA4 LINE L1 -3 6152 2463 27 0 0 0 chr5 50270509 50270536 -149359614 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr5 50270690 50270713 -149359437 + AT_rich Low_complexity Low_complexity 1 23 0 193 98 49 33 chr5 50272486 50272547 -149357603 + GA-rich Low_complexity Low_complexity 2 63 0 3374 115 22 6 chr5 50273102 50273605 -149356545 - MER9 LTR ERVK 0 511 1 14477 85 10 1 chr5 50273636 50275542 -149354608 - HERVK9 LTR ERVK -282 5634 3711 19499 92 9 9 chr5 50275542 50277509 -149352641 - HERVK9 LTR ERVK -3130 2786 760 189 228 0 88 chr5 50277509 50277566 -149352584 - MER5B DNA MER1_type -72 106 55 19499 92 9 9 chr5 50277566 50278327 -149351823 - HERVK9 LTR ERVK -5156 760 1 3615 109 0 19 chr5 50278327 50278848 -149351302 - MER9 LTR ERVK 0 511 1 242 222 95 0 chr5 50279015 50279078 -149351072 - L1MC/D LINE L1 -1896 5889 5821 1471 213 16 3 chr5 50279119 50279424 -149350726 - L1ME1 LINE L1 -332 5834 5526 200 322 62 62 chr5 50279570 50279747 -149350403 + L2 LINE L2 2844 3020 -252 272 320 144 0 chr5 50279782 50279879 -149350271 + L2 LINE L2 3203 3313 0 28 61 0 0 chr5 50280075 50280124 -149350026 + AT_rich Low_complexity Low_complexity 1 49 0 673 282 68 26 chr5 50280347 50280581 -149349569 + MIR SINE MIR 13 256 -6 691 224 36 63 chr5 50281438 50281612 -149348538 - MIR SINE MIR -2 260 94 188 381 0 0 chr5 50282980 50283043 -149347107 - L2 LINE L2 -18 3254 3192 1687 147 19 13 chr5 50284222 50284535 -149345615 + L1MA9 LINE L1 5998 6312 0 1938 128 4 4 chr5 50284793 50285143 -149345007 + AluSx SINE Alu 1 350 0 25 65 0 0 chr5 50286493 50286539 -149343611 + AT_rich Low_complexity Low_complexity 1 46 0 234 0 0 0 chr5 50288170 50288196 -149341954 + (T)n Simple_repeat Simple_repeat 1 26 0 646 227 74 34 chr5 50288908 50289084 -149341066 + MER20 DNA MER1_type 24 206 -13 610 194 122 144 chr5 50290908 50291268 -149338882 - MLT1E1 LTR MaLR -70 584 120 2716 221 70 9 chr5 50291277 50291931 -149338219 + L1MA7 LINE L1 4814 5427 -864 186 103 0 0 chr5 50291931 50291960 -149338190 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2716 221 70 9 chr5 50291960 50292508 -149337642 + L1MA7 LINE L1 5427 6104 -187 2162 95 3 27 chr5 50292521 50292816 -149337334 - AluSx SINE Alu -21 291 4 907 212 0 0 chr5 50292822 50292987 -149337163 - AluJb SINE Alu -11 301 137 236 152 0 0 chr5 50292988 50293034 -149337116 + L1MB2 LINE L1 6110 6155 -16 482 289 19 38 chr5 50293836 50293995 -149336155 + L1MEd LINE L1 481 636 -5483 2173 122 3 3 chr5 50294022 50294357 -149335793 + L1PB1 LINE L1 5816 6150 -1 206 276 92 35 chr5 50294542 50294629 -149335521 + L2 LINE L2 2195 2286 -1028 514 279 212 13 chr5 50294677 50294903 -149335247 + L2 LINE L2 2283 2553 -761 222 128 0 0 chr5 50295660 50295699 -149334451 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 2174 103 3 3 chr5 50297914 50298205 -149331945 - AluSp SINE Alu -21 292 2 219 276 81 103 chr5 50298371 50298545 -149331605 - MER5B DNA MER1_type -6 172 3 408 236 159 25 chr5 50299374 50299531 -149330619 + MER45A DNA AcHobo 1 178 0 424 310 102 58 chr5 50299679 50300201 -149329949 - MLT1L LTR MaLR -67 548 4 37 52 0 0 chr5 50300560 50300618 -149329532 + AT_rich Low_complexity Low_complexity 1 58 0 478 302 86 25 chr5 50300850 50301095 -149329055 + MIR SINE MIR 3 262 0 496 328 134 0 chr5 50301124 50301438 -149328712 - LTR33A LTR ERVL -43 480 125 21 0 0 0 chr5 50301907 50301928 -149328222 + AT_rich Low_complexity Low_complexity 1 21 0 1445 166 162 0 chr5 50302058 50302366 -149327784 - Tigger1 DNA MER2_type -6 2412 2055 489 309 140 72 chr5 50303326 50304009 -149326141 - L2 LINE L2 -2 3270 2565 198 0 0 0 chr5 50304944 50304966 -149325184 + (T)n Simple_repeat Simple_repeat 1 22 0 30 0 0 0 chr5 50305165 50305195 -149324955 + AT_rich Low_complexity Low_complexity 1 30 0 1057 188 0 18 chr5 50306707 50306930 -149323220 + AluJo SINE Alu 86 304 -8 281 140 18 0 chr5 50307127 50307184 -149322966 + (CA)n Simple_repeat Simple_repeat 1 58 0 2251 168 48 15 chr5 50307612 50308568 -149321582 - L1MA9 LINE L1 0 6312 5259 346 317 69 21 chr5 50308622 50308767 -149321383 + MIR SINE MIR 51 202 -60 22 0 0 0 chr5 50309106 50309128 -149321022 + AT_rich Low_complexity Low_complexity 1 22 0 1045 210 33 40 chr5 50309239 50309539 -149320611 + MER33 DNA MER1_type 5 302 -22 1234 251 73 98 chr5 50310294 50311452 -149318698 - L1MC5 LINE L1 -289 7672 6541 572 268 142 37 chr5 50311755 50312375 -149317775 - L1MC4a LINE L1 -1456 6352 5668 2109 136 0 0 chr5 50313449 50313759 -149316391 - AluSx SINE Alu -2 310 1 24 32 0 0 chr5 50314723 50314754 -149315396 + AT_rich Low_complexity Low_complexity 1 31 0 4318 153 32 19 chr5 50315329 50316138 -149314012 - L1MA8 LINE L1 -4 6287 5468 25 0 0 0 chr5 50316259 50316284 -149313866 + AT_rich Low_complexity Low_complexity 1 25 0 874 344 111 7 chr5 50316470 50316877 -149313273 - MLT1J LTR MaLR -62 449 1 207 313 16 16 chr5 50316947 50317011 -149313139 + MIR3 SINE MIR 10 73 -135 21 71 0 0 chr5 50317819 50317861 -149312289 + AT_rich Low_complexity Low_complexity 1 42 0 195 344 76 38 chr5 50318374 50318531 -149311619 + L2 LINE L2 2659 2821 -493 21 0 0 0 chr5 50318572 50318593 -149311557 + AT_rich Low_complexity Low_complexity 1 21 0 288 302 69 35 chr5 50318594 50318710 -149311440 - L2 LINE L2 -1 3312 3193 326 287 12 85 chr5 50318863 50319027 -149311123 + L2 LINE L2 2909 3060 -212 1069 336 41 28 chr5 50319319 50319887 -149310263 + L2 LINE L2 2453 3026 -287 248 200 33 17 chr5 50320179 50320262 -149309888 + (TCCA)n Simple_repeat Simple_repeat 1 84 0 1576 58 151 27 chr5 50320557 50320839 -149309311 - AluY SINE Alu 0 301 1 22 35 0 0 chr5 50320970 50320999 -149309151 + AT_rich Low_complexity Low_complexity 1 29 0 1277 175 73 29 chr5 50321282 50321528 -149308622 - AluJo SINE Alu -55 257 1 279 243 6 123 chr5 50323686 50323915 -149306235 + Charlie8 DNA MER1_type 129 1407 -1010 234 333 30 10 chr5 50324819 50324918 -149305232 + L2 LINE L2 3201 3301 -12 195 69 0 0 chr5 50325935 50325964 -149304186 + (A)n Simple_repeat Simple_repeat 1 29 0 2344 53 23 0 chr5 50326797 50327097 -149303053 + L1PA7 LINE L1 5845 6151 -3 1903 167 36 25 chr5 50327380 50327740 -149302410 - THE1B LTR MaLR 0 364 1 294 125 0 0 chr5 50327981 50328029 -149302121 + (TG)n Simple_repeat Simple_repeat 2 49 0 533 243 14 74 chr5 50328124 50328329 -149301821 + MIR SINE MIR 3 192 -61 22 35 0 0 chr5 50430386 50430415 -149199735 + AT_rich Low_complexity Low_complexity 1 29 0 566 315 143 0 chr5 50430842 50431045 -149199105 + MIR SINE MIR 24 255 -7 3141 226 61 15 chr5 50431178 50432110 -149198040 + L1MB8 LINE L1 5202 6176 -2 1622 232 48 6 chr5 50432223 50432576 -149197574 + MLT1H1 LTR MaLR 188 555 0 566 230 29 75 chr5 50432576 50432661 -149197489 - LTR16C LTR ERVL -67 424 349 1941 140 17 7 chr5 50432661 50432954 -149197196 + AluSx SINE Alu 1 296 -16 566 230 29 75 chr5 50432954 50433040 -149197110 - LTR16C LTR ERVL -142 349 261 2486 160 14 12 chr5 50433318 50433742 -149196408 + MSTB LTR MaLR 1 425 -1 2155 109 3 10 chr5 50434440 50434734 -149195416 - AluSp SINE Alu -19 294 3 296 179 0 0 chr5 50434824 50434891 -149195259 + L1MA7 LINE L1 6224 6290 -1 34 65 0 0 chr5 50435180 50435242 -149194908 + AT_rich Low_complexity Low_complexity 1 62 0 670 281 126 19 chr5 50435442 50435705 -149194445 - MLT1H1 LTR MaLR -235 320 30 23 0 0 0 chr5 50438749 50438772 -149191378 + AT_rich Low_complexity Low_complexity 1 23 0 333 267 107 33 chr5 50438866 50439016 -149191134 + MIR3 SINE MIR 48 208 0 22 0 0 0 chr5 50439016 50439038 -149191112 + AT_rich Low_complexity Low_complexity 1 22 0 343 333 9 0 chr5 50439273 50439378 -149190772 + GA-rich Low_complexity Low_complexity 4 109 0 1725 210 35 65 chr5 50440192 50440820 -149189330 - Charlie1a DNA MER1_type -5 1450 842 2225 191 21 13 chr5 50440820 50441287 -149188863 - L1MC1 LINE L1 0 6333 5863 1035 282 128 0 chr5 50441287 50441631 -149188519 - Charlie1a DNA MER1_type -1067 388 1 34 55 0 0 chr5 50442934 50442989 -149187161 + AT_rich Low_complexity Low_complexity 1 55 0 252 374 22 0 chr5 50444956 50445047 -149185103 + MIR SINE MIR 40 132 -76 197 354 0 0 chr5 50446849 50446931 -149183219 + L2 LINE L2 2678 2759 -555 2353 125 23 0 chr5 50446953 50447298 -149182852 + THE1B LTR MaLR 10 362 -2 218 326 50 107 chr5 50447321 50447685 -149182465 + L2 LINE L2 2791 3133 -180 24506 31 2 0 chr5 50447731 50450705 -149179445 - L1PA3 LINE L1 -1756 4390 1413 8067 31 0 0 chr5 50450705 50452445 -149177705 + L1PA3 LINE L1 4416 6155 0 189 291 0 0 chr5 50452520 50452575 -149177575 + MIR SINE MIR 178 232 -30 279 360 9 26 chr5 50452644 50452758 -149177392 + L2 LINE L2 3160 3271 -1 22 35 0 0 chr5 50454083 50454112 -149176038 + AT_rich Low_complexity Low_complexity 1 29 0 2566 104 22 7 chr5 50454785 50455189 -149174961 + L1PA8 LINE L1 5760 6169 -3 297 0 0 0 chr5 50456271 50456304 -149173846 + (TG)n Simple_repeat Simple_repeat 2 34 0 314 363 33 28 chr5 50456729 50456911 -149173239 + L2 LINE L2 3126 3308 -5 35 0 0 0 chr5 50457019 50457054 -149173096 + AT_rich Low_complexity Low_complexity 1 35 0 1798 162 175 0 chr5 50457057 50457149 -149173001 - L1MA6 LINE L1 -1 6299 6224 1668 151 167 16 chr5 50457149 50457521 -149172629 + MSTA LTR MaLR 1 428 0 1798 162 175 0 chr5 50457521 50457810 -149172340 - L1MA6 LINE L1 -76 6224 5851 1561 221 25 56 chr5 50458048 50458528 -149171622 - MLT1C LTR MaLR -2 465 1 2286 116 0 0 chr5 50459129 50459470 -149170680 - AluSg SINE Alu 0 341 1 652 233 46 50 chr5 50460101 50460320 -149169830 + Charlie8 DNA MER1_type 107 275 -2142 22 0 0 0 chr5 50462423 50462445 -149167705 + AT_rich Low_complexity Low_complexity 1 22 0 11931 196 19 103 chr5 50462538 50464277 -149165873 - L1PA15 LINE L1 0 6816 4934 219 69 0 0 chr5 50464277 50464306 -149165844 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 11931 196 19 103 chr5 50464306 50465534 -149164616 - L1PA15 LINE L1 -1882 4934 3605 2270 111 7 0 chr5 50465534 50465832 -149164318 - AluSp SINE Alu -13 300 1 11931 196 19 103 chr5 50465832 50466643 -149163507 - L1PA15 LINE L1 -3211 3605 2728 3174 116 41 4 chr5 50466643 50467126 -149163024 - MER75 DNA T2_type -13 501 1 11931 196 19 103 chr5 50467126 50468192 -149161958 - L1PA15 LINE L1 -4088 2728 2041 1822 173 0 26 chr5 50468192 50468498 -149161652 - AluJb SINE Alu -13 299 2 11931 196 19 103 chr5 50468498 50469237 -149160913 - L1PA15 LINE L1 -4775 2041 1242 3010 293 42 25 chr5 50469249 50470151 -149159999 - L1PA15 LINE L1 -5869 918 2 2417 56 0 1 chr5 50470159 50470559 -149159591 - L1P2 LINE L1 -679 5475 5077 373 0 0 0 chr5 50470558 50470599 -149159551 + L1P2 LINE L1 5530 5570 -585 * 999 220 56 70 chr5 50470599 50470940 -149159210 - MLT1E2 LTR MaLR -203 423 88 21 0 0 0 chr5 50471061 50471082 -149159068 + AT_rich Low_complexity Low_complexity 1 21 0 430 194 9 9 chr5 50471109 50471217 -149158933 + L1MB7 LINE L1 6071 6178 -6 621 325 77 13 chr5 50471379 50471613 -149158537 - MIR SINE MIR 0 262 14 26 64 0 0 chr5 50471747 50471794 -149158356 + AT_rich Low_complexity Low_complexity 1 47 0 5095 35 11 0 chr5 50471795 50472402 -149157748 - L1PA4 LINE L1 -12 6143 5530 2491 44 0 1 chr5 50472402 50472874 -149157276 + L1PA4 LINE L1 5078 5548 -606 342 331 0 15 chr5 50472874 50472899 -149157251 + MIR SINE MIR 121 145 -117 2136 169 58 60 chr5 50472899 50473367 -149156783 - MLT1C LTR MaLR 0 467 1 342 331 0 15 chr5 50473367 50473474 -149156676 + MIR SINE MIR 145 251 -11 334 335 60 27 chr5 50473864 50474049 -149156101 + MIR3 SINE MIR 3 193 -15 656 154 0 9 chr5 50474072 50474182 -149155968 + Tigger4(Zombi) DNA MER2_type 2622 2730 -1 3031 73 42 0 chr5 50474384 50474793 -149155357 - L1PA7 LINE L1 0 6154 5729 3554 65 1 12 chr5 50474793 50475321 -149154829 + L1PA7 LINE L1 5193 5715 -439 402 254 166 28 chr5 50477062 50477243 -149152907 - MIR SINE MIR -55 207 2 239 333 44 11 chr5 50477255 50477345 -149152805 + L2 LINE L2 3139 3231 -41 271 252 16 55 chr5 50478256 50478383 -149151767 - L1MC/D LINE L1 -1985 5823 5702 1310 223 31 62 chr5 50478464 50478849 -149151301 + MLT1A2 LTR MaLR 2 374 0 353 257 119 36 chr5 50478921 50479224 -149150926 - L1ME4a LINE L1 -142 5979 5652 1881 166 6 10 chr5 50479569 50479882 -149150268 + AluSx SINE Alu 1 312 0 207 274 36 48 chr5 50480065 50480149 -149150001 + MIR SINE MIR 99 181 -81 15191 49 26 1 chr5 50480238 50482170 -149147980 + L1P LINE L1 487 2466 -3680 1985 143 55 25 chr5 50482303 50482667 -149147483 + THE1C LTR MaLR 1 375 0 9623 117 30 36 chr5 50482670 50484257 -149145893 + THE1C-int LTR MaLR 4 1580 0 1625 155 73 39 chr5 50484266 50484621 -149145529 + THE1C LTR MaLR 9 375 0 246 32 0 0 chr5 50484895 50484926 -149145224 + (TG)n Simple_repeat Simple_repeat 2 32 0 347 293 131 42 chr5 50485038 50485495 -149144655 - L1M4 LINE L1 -2962 3184 2687 33 0 0 0 chr5 50485718 50485751 -149144399 + AT_rich Low_complexity Low_complexity 1 33 0 22 80 0 0 chr5 50485832 50485882 -149144268 + AT_rich Low_complexity Low_complexity 1 50 0 203 332 153 33 chr5 50485882 50486123 -149144027 + L2 LINE L2 2374 2643 -671 26 0 0 0 chr5 50486149 50486175 -149143975 + AT_rich Low_complexity Low_complexity 1 26 0 1369 256 16 11 chr5 50486183 50486546 -149143604 - MLT1A1 LTR MaLR 0 365 1 193 209 47 0 chr5 50487065 50487108 -149143042 - MIR SINE MIR 0 262 218 1497 278 28 35 chr5 50487109 50487616 -149142534 - LTR40a LTR ERVL 0 519 17 440 279 29 0 chr5 50487616 50487752 -149142398 - MIR SINE MIR -27 235 96 185 65 32 0 chr5 50488485 50488516 -149141634 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 456 303 79 46 chr5 50489088 50489329 -149140821 - MLT1K LTR MaLR -13 575 327 215 333 0 0 chr5 50490609 50490681 -149139469 - L2 LINE L2 0 3272 3201 562 259 8 0 chr5 50491016 50491147 -149139003 - MER94 DNA DNA -2 132 1 304 280 84 0 chr5 50493263 50493370 -149136780 + MIR SINE MIR 33 148 -60 214 317 10 50 chr5 50493611 50493712 -149136438 - MIR3 SINE MIR -14 194 98 241 216 23 23 chr5 50494162 50494250 -149135900 + GA-rich Low_complexity Low_complexity 2 89 0 1042 82 11 33 chr5 50494250 50494336 -149135814 + (GAAA)n Simple_repeat Simple_repeat 1 264 0 1042 82 11 33 chr5 50494336 50494520 -149135630 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 25 31 0 0 chr5 50495518 50495550 -149134600 + AT_rich Low_complexity Low_complexity 1 32 0 204 325 13 0 chr5 50496039 50496116 -149134034 - MIR SINE MIR -12 250 173 28 29 0 0 chr5 50496150 50496185 -149133965 + AT_rich Low_complexity Low_complexity 1 35 0 204 67 0 0 chr5 50496750 50496780 -149133370 + (GA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr5 50497471 50497493 -149132657 + AT_rich Low_complexity Low_complexity 1 22 0 1875 126 0 84 chr5 50498263 50498596 -149131554 + AluSx SINE Alu 1 305 -7 31 58 0 0 chr5 50501127 50501179 -149128971 + AT_rich Low_complexity Low_complexity 1 52 0 26 30 0 0 chr5 50501201 50501234 -149128916 + AT_rich Low_complexity Low_complexity 1 33 0 184 265 98 59 chr5 50502492 50502594 -149127556 + MIR SINE MIR 40 145 -63 1909 117 0 0 chr5 50503517 50503774 -149126376 + AluSq SINE Alu 40 296 -17 24 85 0 0 chr5 50503883 50503942 -149126208 + AT_rich Low_complexity Low_complexity 1 59 0 198 71 0 0 chr5 50505171 50505199 -149124951 + (TG)n Simple_repeat Simple_repeat 1 28 0 326 303 61 0 chr5 50505458 50505590 -149124560 + L2 LINE L2 2215 2354 -960 216 344 130 17 chr5 50505702 50505932 -149124218 + L2 LINE L2 2554 2809 -505 246 20 0 80 chr5 50506600 50506650 -149123500 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 191 377 46 6 chr5 50506734 50506909 -149123241 - L2 LINE L2 -523 2791 2610 34 55 0 0 chr5 50506909 50506964 -149123186 + AT_rich Low_complexity Low_complexity 1 55 0 667 172 190 11 chr5 50507025 50507199 -149122951 + L1PBa LINE L1 1 205 -6658 303 279 64 43 chr5 50507545 50507685 -149122465 + MIR3 SINE MIR 5 147 -61 185 0 40 0 chr5 50507726 50507751 -149122399 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 201 309 82 9 chr5 50508228 50508338 -149121812 - L2 LINE L2 -848 2466 2349 654 265 50 5 chr5 50508603 50508803 -149121347 - MER3 DNA MER1_type 0 209 1 332 219 0 0 chr5 50509548 50509612 -149120538 + MER117 DNA MER1_type 56 119 -78 192 320 100 10 chr5 50510226 50510326 -149119824 - L2 LINE L2 0 3272 3164 202 268 14 56 chr5 50511937 50512008 -149118142 + L2 LINE L2 3234 3301 -12 1988 135 3 0 chr5 50513028 50513317 -149116833 - AluSc SINE Alu -19 290 1 311 257 0 27 chr5 50514293 50514367 -149115783 + L2 LINE L2 3242 3313 0 662 179 211 9 chr5 50514582 50514805 -149115345 - L1MD2 LINE L1 -2 6357 6090 25643 137 12 18 chr5 50515279 50519075 -149111075 - L1PA8A LINE L1 -28 6418 2613 186 43 0 0 chr5 50519075 50519098 -149111052 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 25643 137 12 18 chr5 50519098 50521641 -149108509 - L1PA8A LINE L1 -3833 2613 57 192 135 0 0 chr5 50521824 50521861 -149108289 + (CA)n Simple_repeat Simple_repeat 2 38 0 2405 81 0 0 chr5 50522300 50522597 -149107553 + AluY SINE Alu 1 297 -14 21 36 0 0 chr5 50522872 50522900 -149107250 + AT_rich Low_complexity Low_complexity 1 28 0 315 71 0 0 chr5 50523023 50523065 -149107085 + (CA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr5 50523161 50523182 -149106968 + AT_rich Low_complexity Low_complexity 1 21 0 376 292 41 97 chr5 50523671 50523899 -149106251 + L1MEd LINE L1 730 926 -5193 2374 222 54 29 chr5 50523899 50524489 -149105661 - MER77 LTR ERV1 0 605 1 376 292 41 97 chr5 50524489 50524674 -149105476 + L1MEd LINE L1 926 1120 -4999 205 333 0 0 chr5 50525006 50525075 -149105075 + MIR SINE MIR 92 160 -102 369 323 39 20 chr5 50525886 50526242 -149103908 + L1MEd LINE L1 2249 2611 -3518 391 174 256 0 chr5 50526270 50526356 -149103794 + AluJb SINE Alu 1 108 -194 483 304 141 14 chr5 50526375 50526512 -149103638 - MER20B DNA MER1_type -368 415 297 772 194 67 22 chr5 50526512 50526692 -149103458 - MER5A DNA MER1_type 0 189 2 483 304 141 14 chr5 50526692 50526837 -149103313 - MER20B DNA MER1_type -486 297 97 * 530 260 206 10 chr5 50526834 50527038 -149103112 - MLT1H1 LTR MaLR -311 244 1 266 283 9 66 chr5 50527244 50527350 -149102800 - MLT1A2-int LTR MaLR -238 1133 1034 814 196 53 72 chr5 50527370 50527635 -149102515 + MLT1A1 LTR MaLR 1 260 -105 228 250 4 42 chr5 50528109 50528201 -149101949 - MLT1A2-int LTR MaLR -1280 91 2 326 345 154 26 chr5 50528252 50528519 -149101631 - MLT1H1 LTR MaLR -207 348 48 1592 157 32 21 chr5 50528535 50528815 -149101335 - AluJb SINE Alu -29 283 1 238 225 0 0 chr5 50528815 50528855 -149101295 - MLT1H1 LTR MaLR -495 60 21 441 303 162 25 chr5 50531840 50532038 -149098112 - MIR SINE MIR -36 226 2 666 201 41 42 chr5 50532529 50532715 -149097435 + MER5B DNA MER1_type 1 189 0 260 291 188 0 chr5 50533039 50533156 -149096994 + MIR SINE MIR 84 222 -40 214 429 7 21 chr5 50535441 50535581 -149094569 - MIR3 SINE MIR -48 160 23 8981 37 13 1 chr5 50535771 50537515 -149092635 + L1PA16 LINE L1 4328 6153 -2 2211 117 0 3 chr5 50537946 50538253 -149091897 + AluSg SINE Alu 1 306 -4 1353 256 38 11 chr5 50538280 50538627 -149091523 - MLT1A2 LTR MaLR 0 374 19 23 33 0 0 chr5 50538939 50538969 -149091181 + AT_rich Low_complexity Low_complexity 1 30 0 2028 181 37 76 chr5 50540573 50541113 -149089037 + LTR53 LTR ERVL 1 519 0 25 0 0 0 chr5 50541228 50541253 -149088897 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr5 50541342 50541366 -149088784 + AT_rich Low_complexity Low_complexity 1 24 0 2797 138 8 36 chr5 50545262 50545732 -149084418 - LTR32 LTR ERVL 0 471 15 571 230 17 73 chr5 50545874 50546052 -149084098 + MER20 DNA MER1_type 52 219 0 532 301 0 0 chr5 50546220 50546353 -149083797 - L2 LINE L2 0 3272 3140 291 288 63 9 chr5 50546566 50546677 -149083473 - L2 LINE L2 -208 3064 2948 275 319 28 62 chr5 50547883 50548027 -149082123 - L2 LINE L2 0 3272 3134 478 309 62 31 chr5 50548670 50548929 -149081221 + L2 LINE L2 3041 3307 -6 314 309 146 34 chr5 50549047 50549225 -149080925 + MIR SINE MIR 4 201 -61 728 313 122 47 chr5 50549598 50550214 -149079936 - L3 LINE CR1 -45 1532 871 240 263 13 40 chr5 50550605 50550681 -149079469 + Charlie4 DNA MER1_type 1888 1961 0 263 320 40 20 chr5 50550709 50550809 -149079341 - MIR3 SINE MIR -97 111 10 210 200 0 20 chr5 50550847 50550897 -149079253 + (TA)n Simple_repeat Simple_repeat 2 50 0 7037 51 3 10 chr5 50551507 50552464 -149077686 + L1PA6 LINE L1 5204 6154 0 328 399 6 24 chr5 50552496 50552664 -149077486 - MIR3 SINE MIR 0 208 44 236 305 8 55 chr5 50552912 50553040 -149077110 - MIR3 SINE MIR -2 206 85 7360 214 43 31 chr5 50553341 50555045 -149075105 - L1MC1 LINE L1 -9 6324 4570 2241 113 3 0 chr5 50555045 50555346 -149074804 + AluSx SINE Alu 1 302 -10 7360 214 43 31 chr5 50555346 50556880 -149073270 - L1MC1 LINE L1 -1763 4570 3056 699 137 0 0 chr5 50556880 50557004 -149073146 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 382 206 0 0 chr5 50557006 50557074 -149073076 - AluJ/FRAM SINE Alu -5 297 230 37406 38 2 5 chr5 50557075 50562505 -149067645 + L1PA4 LINE L1 741 6155 0 618 181 8 16 chr5 50563089 50563216 -149066934 + MER105 DNA DNA 37 162 -42 187 286 143 55 chr5 50563308 50563381 -149066769 + L2 LINE L2 3174 3258 -14 2113 97 45 3 chr5 50563381 50563671 -149066479 + AluSx SINE Alu 1 302 -10 187 286 143 55 chr5 50563671 50563688 -149066462 + L2 LINE L2 3258 3272 0 185 368 50 22 chr5 50565064 50565246 -149064904 + MIR3 SINE MIR 5 191 -17 258 260 0 0 chr5 50566770 50566820 -149063330 - MIR SINE MIR -192 70 21 309 329 72 18 chr5 50567086 50567253 -149062897 - MIR SINE MIR -70 192 17 241 368 57 0 chr5 50567358 50567464 -149062686 + MIR SINE MIR 31 142 -66 395 248 43 43 chr5 50567609 50567750 -149062400 + L2 LINE L2 3173 3313 0 180 111 0 0 chr5 50568168 50568195 -149061955 + (T)n Simple_repeat Simple_repeat 1 27 0 1600 62 0 5 chr5 50568211 50568404 -149061746 - AluY SINE Alu -83 228 37 1937 156 26 34 chr5 50568522 50568900 -149061250 + THE1C LTR MaLR 1 375 0 10458 112 28 15 chr5 50568900 50570460 -149059690 + THE1C-int LTR MaLR 1 1580 0 1160 153 29 37 chr5 50570584 50570826 -149059324 + THE1C LTR MaLR 136 375 0 663 198 25 0 chr5 50571056 50571177 -149058973 - FLAM_A SINE Alu -8 125 2 33 0 0 0 chr5 50571231 50571264 -149058886 + AT_rich Low_complexity Low_complexity 1 33 0 357 24 0 0 chr5 50571931 50571973 -149058177 + (TG)n Simple_repeat Simple_repeat 1 42 0 2238 131 0 0 chr5 50572566 50572878 -149057272 - AluSx SINE Alu 0 312 1 24 0 0 0 chr5 50573084 50573108 -149057042 + AT_rich Low_complexity Low_complexity 1 24 0 355 319 33 33 chr5 50573965 50574147 -149056003 - MER5A DNA MER1_type -7 182 1 21 0 0 0 chr5 50574179 50574200 -149055950 + AT_rich Low_complexity Low_complexity 1 21 0 7652 24 0 0 chr5 50574203 50575180 -149054970 - L1PA3 LINE L1 -3 6152 5178 738 21 11 0 chr5 50575180 50575273 -149054877 + L1PA3 LINE L1 5083 5176 -970 25 31 0 0 chr5 50576152 50576184 -149053966 + AT_rich Low_complexity Low_complexity 1 32 0 193 279 162 0 chr5 50577929 50577997 -149052153 - L2 LINE L2 -1061 2253 2175 326 42 21 0 chr5 50578445 50578493 -149051657 + (CA)n Simple_repeat Simple_repeat 2 50 0 251 333 29 0 chr5 50578597 50578699 -149051451 - MIR3 SINE MIR -22 186 82 433 297 66 73 chr5 50578895 50579154 -149050996 - MIR SINE MIR 0 262 6 263 307 84 109 chr5 50579920 50580408 -149049742 + L2 LINE L2 2705 3179 -93 371 305 24 66 chr5 50581656 50581869 -149048281 + HAL1 LINE L1 155 358 -2149 605 246 99 53 chr5 50581895 50582330 -149047820 + HAL1 LINE L1 2036 2490 -17 212 311 28 47 chr5 50582600 50582706 -149047444 + L2 LINE L2 3155 3258 -14 427 149 115 0 chr5 50583225 50583312 -149046838 - MLT1C LTR MaLR 0 467 371 1028 127 16 9 chr5 50583312 50583593 -149046557 - THE1B LTR MaLR 0 364 1 2150 147 11 17 chr5 50583593 50583836 -149046314 - MLT1C LTR MaLR -92 375 133 3212 83 9 9 chr5 50583836 50584280 -149045870 - MLT2A1 LTR ERVL 0 444 1 2150 147 11 17 chr5 50584280 50584397 -149045753 - MLT1C LTR MaLR -334 133 17 261 276 138 24 chr5 50585274 50585397 -149044753 + MARNA DNA Mariner 57 193 -393 4358 199 20 9 chr5 50586358 50588046 -149042104 + L1MB7 LINE L1 4458 6165 -19 306 250 83 0 chr5 50588722 50588818 -149041332 - LTR16A LTR ERVL -12 438 335 286 140 40 0 chr5 50589679 50589729 -149040421 + MADE1 DNA Mariner 1 52 -28 264 77 0 0 chr5 50589945 50589984 -149040166 + (TG)n Simple_repeat Simple_repeat 2 40 0 295 297 81 18 chr5 50590069 50590180 -149039970 - MIR SINE MIR -115 147 30 1309 163 76 116 chr5 50590238 50590618 -149039532 - MLT1A1 LTR MaLR 0 365 1 184 261 277 17 chr5 50591507 50591626 -149038524 - L2 LINE L2 -6 3307 3158 302 339 41 8 chr5 50591826 50591947 -149038203 + L2 LINE L2 3180 3304 -9 252 273 102 31 chr5 50592458 50592586 -149037564 - L2 LINE L2 -1405 1909 1773 251 54 27 0 chr5 50592683 50592720 -149037430 + (CA)n Simple_repeat Simple_repeat 2 39 0 378 42 0 0 chr5 50593252 50593300 -149036850 + (TG)n Simple_repeat Simple_repeat 2 49 0 668 296 100 54 chr5 50593445 50593557 -149036593 + L1MEd LINE L1 778 883 -1607 197 65 32 0 chr5 50593557 50593588 -149036562 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 668 296 100 54 chr5 50593588 50594184 -149035966 + L1MEd LINE L1 883 1639 -851 347 209 9 0 chr5 50594184 50594294 -149035856 + (CA)n Simple_repeat Simple_repeat 2 112 0 2050 125 7 0 chr5 50594429 50594732 -149035418 + AluSp SINE Alu 1 305 -8 281 230 0 68 chr5 50595740 50595814 -149034336 - MER115 DNA AcHobo -624 69 1 2224 89 3 0 chr5 50597032 50597314 -149032836 + AluSp SINE Alu 11 293 -20 221 83 28 0 chr5 50598279 50598315 -149031835 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1002 194 15 10 chr5 50598469 50598670 -149031480 + MER3 DNA MER1_type 3 204 -5 673 289 47 9 chr5 50599273 50599484 -149030666 + L2 LINE L2 2449 2667 -647 2591 107 6 3 chr5 50599572 50599935 -149030215 + THE1B LTR MaLR 1 364 0 704 197 0 0 chr5 50600112 50600234 -149029916 + AluJo SINE Alu 1 122 -190 944 277 122 26 chr5 50600257 50600507 -149029643 + L2 LINE L2 2695 2920 -393 1475 223 18 47 chr5 50600507 50600889 -149029261 + MLT1A2 LTR MaLR 4 374 0 944 277 122 26 chr5 50600889 50601190 -149028960 + L2 LINE L2 2920 3295 -18 1676 65 0 0 chr5 50601416 50601630 -149028520 + L1PA5 LINE L1 5934 6147 -7 2142 127 39 30 chr5 50601957 50602318 -149027832 + THE1B LTR MaLR 1 364 0 255 286 65 0 chr5 50602611 50602688 -149027462 - MIR3 SINE MIR -48 160 79 214 174 0 0 chr5 50602938 50602984 -149027166 + (TA)n Simple_repeat Simple_repeat 1 46 0 242 222 111 0 chr5 50602991 50603072 -149027078 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr5 50603072 50603096 -149027054 + (TA)n Simple_repeat Simple_repeat 2 25 0 1487 260 91 2 chr5 50603111 50603542 -149026608 - MLT2B1 LTR ERVL -51 469 1 370 296 76 48 chr5 50603806 50604163 -149025987 + Charlie8 DNA MER1_type 151 278 -2139 28 48 0 0 chr5 50604592 50604634 -149025516 + AT_rich Low_complexity Low_complexity 1 42 0 889 218 6 0 chr5 50604715 50604889 -149025261 + AluJo SINE Alu 125 299 -13 27 62 0 0 chr5 50604967 50605015 -149025135 + AT_rich Low_complexity Low_complexity 1 48 0 1988 204 63 73 chr5 50605100 50605658 -149024492 - MLT2B3 LTR ERVL -2 552 1 1030 209 125 52 chr5 50605905 50606274 -149023876 - MSTD LTR MaLR 0 396 1 26 0 0 0 chr5 50606327 50606353 -149023797 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr5 50607480 50607505 -149022645 + AT_rich Low_complexity Low_complexity 1 25 0 2036 119 34 0 chr5 50607508 50607803 -149022347 - AluSx SINE Alu -7 305 1 2330 57 0 0 chr5 50608212 50608543 -149021607 + AluY SINE Alu 1 331 0 192 380 0 13 chr5 50609073 50609152 -149020998 + L2 LINE L2 3000 3077 -195 344 288 87 85 chr5 50609187 50609463 -149020687 + L1ME4a LINE L1 5683 5962 -159 906 189 0 18 chr5 50609463 50609627 -149020523 - FRAM SINE Alu -5 161 1 344 288 87 85 chr5 50609627 50609739 -149020411 + L1ME4a LINE L1 5962 6072 -49 195 42 0 0 chr5 50610460 50610484 -149019666 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 412 298 180 41 chr5 50611094 50611389 -149018761 + L2 LINE L2 2978 3313 0 190 321 0 0 chr5 50612373 50612426 -149017724 + L2 LINE L2 3261 3313 0 1520 138 0 0 chr5 50613297 50613522 -149016628 + AluSg/x SINE Alu 85 309 -3 640 260 127 83 chr5 50614604 50615038 -149015112 + LTR33 LTR ERVL 4 456 -65 195 186 0 0 chr5 50615110 50615153 -149014997 + (CATA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr5 50616605 50616625 -149013525 + (TG)n Simple_repeat Simple_repeat 2 21 0 2870 250 54 85 chr5 50617093 50618292 -149011858 - L1M4 LINE L1 -5365 1177 16 23 0 0 0 chr5 50618554 50618577 -149011573 + AT_rich Low_complexity Low_complexity 1 23 0 1534 203 6 22 chr5 50618588 50618903 -149011247 - AluJo SINE Alu 0 312 3 2346 85 0 0 chr5 50619107 50619400 -149010750 - AluY SINE Alu -18 293 1 33 25 0 0 chr5 50620979 50621019 -149009131 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 50623025 50623047 -149007103 + AT_rich Low_complexity Low_complexity 1 22 0 231 61 0 0 chr5 50623213 50623246 -149006904 + (A)n Simple_repeat Simple_repeat 1 33 0 657 292 23 42 chr5 50623546 50623806 -149006344 - MIR SINE MIR 0 262 8 2140 125 66 0 chr5 50623961 50624280 -149005870 - MER1A DNA MER1_type 0 529 190 180 352 57 11 chr5 50624346 50624434 -149005716 + MIR SINE MIR 23 114 -148 26 30 0 0 chr5 50624730 50624763 -149005387 + AT_rich Low_complexity Low_complexity 1 33 0 197 156 0 22 chr5 50624898 50624943 -149005207 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 237 265 24 24 chr5 50626057 50626140 -149004010 + CT-rich Low_complexity Low_complexity 6 88 0 2407 162 63 29 chr5 50628948 50629436 -149000714 - MLT1D LTR MaLR 0 505 1 644 242 119 98 chr5 50629754 50630142 -149000008 - LTR33 LTR ERVL 0 521 126 297 146 0 18 chr5 50630222 50630277 -148999873 - MIR SINE MIR -27 235 182 409 129 29 0 chr5 50630292 50630362 -148999788 + HY3 scRNA scRNA 29 100 -1 286 322 60 40 chr5 50630395 50630544 -148999606 - MIR SINE MIR -109 153 2 186 359 16 0 chr5 50631765 50631829 -148998321 + L2 LINE L2 3116 3180 -92 660 214 23 35 chr5 50632006 50632179 -148997971 - MER104 DNA Tc2 -9 171 1 324 0 0 0 chr5 50633099 50633135 -148997015 + (CA)n Simple_repeat Simple_repeat 2 37 0 301 325 60 26 chr5 50634711 50634862 -148995288 - MIR3 SINE MIR -45 163 8 318 337 166 12 chr5 50636268 50636431 -148993719 + MIR SINE MIR 1 188 -74 1666 167 105 45 chr5 50637048 50637607 -148992543 - MER4A LTR ERV1 -9 456 1 212 274 104 57 chr5 50641181 50641287 -148988863 - MIR SINE MIR -151 111 1 26 0 0 0 chr5 50641525 50641551 -148988599 + AT_rich Low_complexity Low_complexity 1 26 0 438 303 74 0 chr5 50642131 50642293 -148987857 + MER5B DNA MER1_type 5 178 0 331 301 224 0 chr5 50642312 50642455 -148987695 + MER5A DNA MER1_type 12 186 -3 221 360 94 57 chr5 50643723 50644181 -148985969 - L2 LINE L2 -417 2897 2423 313 328 92 11 chr5 50645897 50646071 -148984079 - MIR SINE MIR -4 258 71 22 0 0 0 chr5 50646160 50646182 -148983968 + AT_rich Low_complexity Low_complexity 1 22 0 327 130 0 0 chr5 50647247 50647301 -148982849 + (T)n Simple_repeat Simple_repeat 1 54 0 406 242 92 42 chr5 50647348 50647468 -148982682 - MIR3 SINE MIR 0 208 83 409 297 83 44 chr5 50647766 50647995 -148982155 - L2 LINE L2 -1 3271 3034 1996 120 13 7 chr5 50648102 50648402 -148981748 - AluSx SINE Alu -10 302 1 330 239 67 67 chr5 50649839 50649973 -148980177 + MIR3 SINE MIR 61 194 -14 605 208 82 19 chr5 50650473 50650632 -148979518 + MER5B DNA MER1_type 7 175 -3 390 305 80 65 chr5 50651144 50651344 -148978806 + MIR SINE MIR 14 216 -46 252 0 0 0 chr5 50651389 50651417 -148978733 + (T)n Simple_repeat Simple_repeat 1 28 0 21 36 0 0 chr5 50651611 50651639 -148978511 + AT_rich Low_complexity Low_complexity 1 28 0 218 255 0 0 chr5 50652558 50652609 -148977541 + MIR SINE MIR 30 80 -182 1794 151 34 0 chr5 50652739 50653030 -148977120 - AluSx SINE Alu -5 307 7 459 150 130 0 chr5 50653950 50654050 -148976100 + MER53 DNA DNA 77 189 0 185 283 268 5 chr5 50654584 50654789 -148975361 + MIR SINE MIR 1 259 -3 237 276 127 11 chr5 50655835 50655963 -148974187 + MIR3 SINE MIR 5 149 -82 743 255 4 64 chr5 50656444 50656679 -148973471 - MER58A DNA MER1_type 0 224 4 234 167 42 0 chr5 50657499 50657554 -148972596 - MLT1I LTR MaLR -34 412 316 6163 33 1 0 chr5 50657668 50658765 -148971385 - L1P2 LINE L1 -420 5735 4637 3270 24 0 0 chr5 50658765 50659138 -148971012 + L1PA4 LINE L1 5775 6154 -1 227 385 26 8 chr5 50660763 50660880 -148969270 - MIR SINE MIR -56 206 88 315 307 31 88 chr5 50661412 50661604 -148968546 + MIR3 SINE MIR 20 200 -8 2105 121 0 10 chr5 50661805 50662103 -148968047 - AluSx SINE Alu -12 300 6 22 70 0 0 chr5 50662707 50662750 -148967400 + AT_rich Low_complexity Low_complexity 1 43 0 2058 147 3 0 chr5 50662887 50663193 -148966957 - AluSx SINE Alu -5 307 1 439 198 0 0 chr5 50663391 50663482 -148966668 + L1MD1 LINE L1 6147 6237 -5 4077 186 18 34 chr5 50663546 50663885 -148966265 - L1MB5 LINE L1 -14 6160 5817 13856 117 50 37 chr5 50663885 50664240 -148965910 + Tigger1 DNA MER2_type 2 351 -2067 2147 128 7 0 chr5 50664240 50664546 -148965604 + AluSg SINE Alu 1 308 -2 13856 117 50 37 chr5 50664546 50666577 -148963573 + Tigger1 DNA MER2_type 351 2418 0 4077 186 18 34 chr5 50666577 50667128 -148963022 - L1MB5 LINE L1 -357 5817 5284 266 150 133 0 chr5 50667182 50667242 -148962908 + L1ME3A LINE L1 6052 6119 -51 1650 181 30 93 chr5 50667280 50667773 -148962377 - MLT1C LTR MaLR 0 467 6 765 186 8 0 chr5 50667846 50667970 -148962180 + AluSq/x SINE Alu 1 125 -188 2224 108 3 3 chr5 50669737 50670034 -148960116 - AluSx SINE Alu -15 297 1 228 374 26 17 chr5 50670285 50670400 -148959750 + L2 LINE L2 3153 3268 -4 229 260 0 82 chr5 50671049 50671122 -148959028 + MIR3 SINE MIR 133 199 -9 462 18 0 0 chr5 50671370 50671425 -148958725 + (TG)n Simple_repeat Simple_repeat 2 56 0 2019 159 0 0 chr5 50671524 50671819 -148958331 + AluSx SINE Alu 1 295 -17 862 232 25 15 chr5 50672834 50673032 -148957118 - MLT1B LTR MaLR 0 390 191 344 198 0 12 chr5 50673040 50673126 -148957024 + GA-rich Low_complexity Low_complexity 1 85 0 222 251 29 35 chr5 50673126 50673297 -148956853 + (TAG)n Simple_repeat Simple_repeat 1 170 0 * 306 112 45 82 chr5 50673210 50673344 -148956806 + (TATAG)n Simple_repeat Simple_repeat 2 130 0 339 176 33 11 chr5 50673347 50673438 -148956712 + GA-rich Low_complexity Low_complexity 2 94 0 643 219 69 12 chr5 50673452 50673612 -148956538 - MLT1B LTR MaLR -217 173 5 1733 190 0 0 chr5 50677516 50677832 -148952318 + AluJb SINE Alu 1 316 0 23 0 0 0 chr5 50678738 50678761 -148951389 + AT_rich Low_complexity Low_complexity 1 23 0 245 163 41 20 chr5 50681315 50681364 -148948786 - MIR SINE MIR -63 145 96 2172 115 0 20 chr5 50681387 50681691 -148948459 - AluSx SINE Alu -14 298 1 207 0 0 0 chr5 50682403 50682426 -148947724 + (TTTTTA)n Simple_repeat Simple_repeat 5 27 0 368 350 17 0 chr5 50682468 50682588 -148947562 + MIR SINE MIR 31 152 -56 180 111 0 0 chr5 50682631 50682658 -148947492 + (TTA)n Simple_repeat Simple_repeat 3 29 0 318 339 16 8 chr5 50683196 50683317 -148946833 + MIR SINE MIR 81 202 -60 366 262 12 0 chr5 50684138 50684222 -148945928 - MER5A DNA MER1_type -86 103 19 954 203 53 0 chr5 50684292 50684499 -148945651 + MER20 DNA MER1_type 2 219 0 1759 195 20 12 chr5 50684609 50684818 -148945332 - MER7A DNA MER2_type -2692 346 133 1856 167 0 7 chr5 50684818 50685118 -148945032 + AluSx SINE Alu 1 298 -14 1759 195 20 12 chr5 50685118 50685252 -148944898 - MER7A DNA MER2_type -2905 133 2 401 252 114 8 chr5 50685252 50685375 -148944775 + L3b LINE CR1 1205 1340 -243 212 0 0 35 chr5 50686244 50686273 -148943877 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1783 139 22 8 chr5 50686277 50686544 -148943606 - AluSx SINE Alu -37 275 5 257 330 11 0 chr5 50686726 50686817 -148943333 - MIR SINE MIR 0 262 171 21 36 0 0 chr5 50687255 50687283 -148942867 + AT_rich Low_complexity Low_complexity 1 28 0 5023 40 0 0 chr5 50687283 50687882 -148942268 - L1PA5 LINE L1 -6 6148 5550 2295 101 3 0 chr5 50688424 50688721 -148941429 - AluSg SINE Alu -12 298 1 200 378 0 11 chr5 50690254 50690344 -148939806 - L2 LINE L2 -2 3311 3223 421 284 14 35 chr5 50790543 50790684 -148839466 + L2 LINE L2 2715 2852 -462 185 329 14 29 chr5 50790849 50790919 -148839231 + L2 LINE L2 3229 3297 -16 815 295 62 4 chr5 50791152 50791379 -148838771 - MIR SINE MIR 0 262 23 346 214 0 0 chr5 50791391 50791461 -148838689 + MIR SINE MIR 179 248 -14 386 320 6 17 chr5 50791679 50791851 -148838299 - L1ME LINE L1 -401 5720 5551 1350 310 60 93 chr5 50791910 50792621 -148837529 - L3 LINE CR1 -245 1332 662 2454 87 0 0 chr5 50792621 50792930 -148837220 + AluSc SINE Alu 1 309 0 1350 310 60 93 chr5 50792930 50793232 -148836918 - L3 LINE CR1 -915 662 352 245 275 0 22 chr5 50793522 50793613 -148836537 - L1MC4 LINE L1 -1339 6703 6615 1913 167 3 0 chr5 50793944 50794243 -148835907 + AluJo SINE Alu 1 300 -12 1257 85 6 23 chr5 50794289 50794466 -148835684 + AluSp SINE Alu 1 174 -139 21 0 0 0 chr5 50794893 50794914 -148835236 + AT_rich Low_complexity Low_complexity 1 21 0 1543 244 61 80 chr5 50795089 50795936 -148834214 - L1ME LINE L1 -5228 842 12 1903 172 0 6 chr5 50798239 50798553 -148831597 - AluSx SINE Alu 0 312 1 206 286 0 43 chr5 50799836 50799906 -148830244 + CT-rich Low_complexity Low_complexity 3 69 0 421 281 107 39 chr5 50799920 50800098 -148830052 - MIR3 SINE MIR -4 204 15 348 311 25 0 chr5 50801136 50801258 -148828892 - L2 LINE L2 0 3272 3148 378 256 16 85 chr5 50801308 50801396 -148828754 + MER5A DNA MER1_type 70 148 -41 2146 136 0 0 chr5 50801396 50801704 -148828446 - AluSp SINE Alu -5 308 1 378 256 16 85 chr5 50801704 50801744 -148828406 + MER5A DNA MER1_type 148 189 0 212 293 60 87 chr5 50801779 50801929 -148828221 + L2 LINE L2 3165 3310 -3 21 36 0 0 chr5 50802005 50802033 -148828117 + AT_rich Low_complexity Low_complexity 1 28 0 213 136 0 23 chr5 50802425 50802469 -148827681 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 301 224 0 59 chr5 50803430 50803515 -148826635 + MER116 DNA Mariner 1 80 0 211 294 0 0 chr5 50803846 50803897 -148826253 + GA-rich Low_complexity Low_complexity 2 52 0 548 42 0 0 chr5 50804863 50804934 -148825216 - AluSg/x SINE Alu -74 236 166 25 0 0 0 chr5 50806187 50806212 -148823938 + AT_rich Low_complexity Low_complexity 1 25 0 263 233 0 0 chr5 50806254 50806314 -148823836 - MSTB2 LTR MaLR -5 452 393 807 228 180 27 chr5 50806427 50806721 -148823429 - MSTB2 LTR MaLR -118 339 1 326 227 13 0 chr5 50807447 50807522 -148822628 - MER103 DNA DNA -90 76 1 278 71 24 0 chr5 50808632 50808674 -148821476 + MADE1 DNA Mariner 2 44 -36 21 0 0 0 chr5 50810619 50810640 -148819510 + AT_rich Low_complexity Low_complexity 1 21 0 205 222 0 37 chr5 50811407 50811461 -148818689 + GA-rich Low_complexity Low_complexity 3 54 0 208 299 124 102 chr5 50811546 50811958 -148818192 + L2 LINE L2 2804 3224 -48 2379 76 0 10 chr5 50814569 50814870 -148815280 + AluSq SINE Alu 1 298 -15 887 192 174 5 chr5 50814898 50815122 -148815028 - MER31A LTR ERV1 -9 476 215 2149 255 148 12 chr5 50815136 50815870 -148814280 - MER21B LTR ERV1 -11 852 19 367 220 10 90 chr5 50815870 50815970 -148814180 - MER21B LTR ERV1 -759 104 13 1136 218 7 98 chr5 50815976 50816384 -148813766 - MER93b LTR ERV1 0 373 3 930 238 0 0 chr5 50816418 50816603 -148813547 - MER31B LTR ERV1 -281 185 1 272 258 43 21 chr5 50816619 50816712 -148813438 - L1MC4 LINE L1 -21 8021 7927 2065 52 4 19 chr5 50817177 50817444 -148812706 - AluY SINE Alu -8 303 41 320 288 72 0 chr5 50818483 50818594 -148811556 + L2 LINE L2 3186 3304 -9 222 218 34 34 chr5 50818594 50818741 -148811409 + GA-rich Low_complexity Low_complexity 4 150 0 2194 109 0 3 chr5 50819516 50819809 -148810341 - AluSx SINE Alu -20 292 1 23 0 0 0 chr5 50820471 50820494 -148809656 + AT_rich Low_complexity Low_complexity 1 23 0 730 209 91 144 chr5 50820808 50820999 -148809151 - L1ME2 LINE L1 -1 6163 5964 3651 154 11 9 chr5 50820999 50821660 -148808490 - L1MA4 LINE L1 -6 6294 5633 730 209 91 144 chr5 50821660 50821962 -148808188 - L1ME2 LINE L1 -200 5964 5696 189 0 0 0 chr5 50821964 50821985 -148808165 + (A)n Simple_repeat Simple_repeat 1 21 0 25 31 0 0 chr5 50822057 50822089 -148808061 + AT_rich Low_complexity Low_complexity 1 32 0 3724 202 37 34 chr5 50822308 50823319 -148806831 + L1ME1 LINE L1 5159 6334 0 331 315 45 0 chr5 50827650 50827761 -148802389 - L2 LINE L2 -2 3270 3155 457 316 86 72 chr5 50827918 50828323 -148801827 + L3 LINE CR1 885 1295 -282 217 345 190 14 chr5 50828335 50828477 -148801673 - MIR3 SINE MIR -17 191 25 284 328 156 0 chr5 50828533 50828713 -148801437 - L2 LINE L2 -22 3291 3084 196 343 14 29 chr5 50828691 50828761 -148801389 + L3b LINE CR1 1507 1575 -8 * 504 261 43 36 chr5 50828868 50829144 -148801006 + L1ME LINE L1 5545 5822 -299 553 303 99 5 chr5 50829223 50829433 -148800717 + MIR SINE MIR 36 262 0 1758 219 57 25 chr5 50829505 50829994 -148800156 + MLT1D LTR MaLR 1 505 0 2298 108 0 3 chr5 50831109 50831423 -148798727 - AluSq SINE Alu 0 313 1 255 31 0 0 chr5 50831831 50831863 -148798287 + (CA)n Simple_repeat Simple_repeat 2 33 0 283 345 34 8 chr5 50832342 50832461 -148797689 - L3 LINE CR1 -175 1402 1281 2478 54 3 0 chr5 50833196 50833490 -148796660 + AluY SINE Alu 3 297 -14 370 303 86 73 chr5 50833506 50833889 -148796261 + L1ME LINE L1 5379 5766 -355 238 349 19 9 chr5 50834932 50835038 -148795112 - L2 LINE L2 -456 2858 2752 336 208 14 0 chr5 50836392 50836464 -148793686 - Charlie8 DNA MER1_type -2201 216 144 21 36 0 0 chr5 50838132 50838160 -148791990 + AT_rich Low_complexity Low_complexity 1 28 0 323 231 8 60 chr5 50839195 50839312 -148790838 + L1MC4 LINE L1 6611 6721 -1321 487 93 3 93 chr5 50839388 50839778 -148790372 + (TA)n Simple_repeat Simple_repeat 1 354 0 461 113 9 82 chr5 50839799 50840868 -148789282 + (TA)n Simple_repeat Simple_repeat 1 991 0 274 152 28 65 chr5 50840891 50841178 -148788972 + (TA)n Simple_repeat Simple_repeat 1 305 -12 270 0 0 0 chr5 50841178 50841208 -148788942 + (TG)n Simple_repeat Simple_repeat 2 31 0 274 152 28 65 chr5 50841208 50841221 -148788929 + (TA)n Simple_repeat Simple_repeat 305 317 0 2323 79 0 0 chr5 50841221 50841512 -148788638 - AluY SINE Alu -20 291 1 1868 71 8 4 chr5 50842824 50843062 -148787088 + AluSg SINE Alu 2 240 -70 22 35 0 0 chr5 50844589 50844618 -148785532 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr5 50844745 50844789 -148785361 + AT_rich Low_complexity Low_complexity 1 44 0 353 235 75 132 chr5 50845712 50846335 -148783815 + HAL1b LINE L1 1228 1348 0 356 315 92 22 chr5 50846555 50846739 -148783411 + MIR SINE MIR 28 224 -38 27 81 0 0 chr5 50848339 50848401 -148781749 + AT_rich Low_complexity Low_complexity 1 62 0 21 0 0 0 chr5 50849453 50849474 -148780676 + AT_rich Low_complexity Low_complexity 1 21 0 436 304 53 18 chr5 50850210 50850381 -148779769 + MIR SINE MIR 32 208 -54 2228 89 0 0 chr5 50850484 50850797 -148779353 + AluSx SINE Alu 1 313 0 337 312 143 50 chr5 50852665 50853336 -148776814 - L2 LINE L2 -107 3165 2438 28 48 0 0 chr5 50854559 50854601 -148775549 + AT_rich Low_complexity Low_complexity 1 42 0 2113 93 0 24 chr5 50854786 50855077 -148775073 + AluSc SINE Alu 1 284 -25 207 0 0 0 chr5 50855077 50855100 -148775050 + (TTA)n Simple_repeat Simple_repeat 3 25 0 453 263 40 29 chr5 50855369 50855544 -148774606 + MER104 DNA Tc2 1 177 -3 312 331 33 0 chr5 50855569 50855690 -148774460 - MIR SINE MIR -135 127 3 301 339 108 0 chr5 50855695 50855825 -148774325 - MIR SINE MIR -3 259 116 1751 192 28 6 chr5 50856272 50856626 -148773524 + MLT1A1 LTR MaLR 1 415 -13 1010 189 4 63 chr5 50856877 50857115 -148773035 - L1MB8 LINE L1 -6 6172 5949 1162 171 66 4 chr5 50857115 50857520 -148772630 - LTR54 LTR ERV1 -19 491 1 1996 165 37 3 chr5 50857524 50857875 -148772275 - MLT1A1 LTR MaLR -2 363 1 250 350 0 0 chr5 50858718 50858798 -148771352 + L2 LINE L2 3234 3313 0 241 299 0 45 chr5 50858844 50858911 -148771239 - L2 LINE L2 -8 3305 3242 534 265 166 14 chr5 50859645 50859868 -148770282 - MIR SINE MIR 0 262 6 205 245 20 0 chr5 50859895 50859944 -148770206 + (TA)n Simple_repeat Simple_repeat 1 50 0 289 296 17 78 chr5 50860113 50860228 -148769922 + MER5A DNA MER1_type 37 144 -45 227 308 0 44 chr5 50860285 50860376 -148769774 + MER5B DNA MER1_type 3 89 -89 875 150 104 17 chr5 50860643 50860816 -148769334 + MER5A DNA MER1_type 1 188 -1 23 0 0 0 chr5 50861241 50861264 -148768886 + AT_rich Low_complexity Low_complexity 1 23 0 471 295 33 0 chr5 50861297 50861419 -148768731 - MIR SINE MIR -70 192 67 781 213 6 0 chr5 50861466 50861626 -148768524 - L1MA5A LINE L1 -5 6292 6132 43 71 0 0 chr5 50862575 50862660 -148767490 + AT_rich Low_complexity Low_complexity 1 85 0 251 326 11 0 chr5 50863592 50863681 -148766469 - L1ME LINE L1 -403 5718 5629 300 252 47 63 chr5 50863717 50863844 -148766306 + L1ME4a LINE L1 5621 5745 -376 528 295 36 26 chr5 50863963 50864156 -148765994 + MIR SINE MIR 67 261 -1 297 207 345 10 chr5 50864192 50864395 -148765755 + L1ME4a LINE L1 5850 6120 -1 2809 3 0 3 chr5 50864426 50864738 -148765412 - AluYa5 SINE Alu 0 311 1 204 125 0 0 chr5 50865511 50865543 -148764607 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 1641 230 41 37 chr5 50866127 50866587 -148763563 - MLT1C LTR MaLR 0 467 6 2187 123 0 0 chr5 50867355 50867665 -148762485 - AluSx SINE Alu -2 310 1 223 239 0 0 chr5 50868446 50868492 -148761658 - L2 LINE L2 -10 3303 3258 22 35 0 0 chr5 50868824 50868853 -148761297 + AT_rich Low_complexity Low_complexity 1 29 0 1581 36 5 15 chr5 50868868 50869063 -148761087 - AluY SINE Alu -9 302 110 6097 172 32 14 chr5 50869254 50870995 -148759155 - L1PA16 LINE L1 -3 7601 5812 2382 58 0 36 chr5 50870995 50871303 -148758847 - AluY SINE Alu -14 297 1 6097 172 32 14 chr5 50871303 50871717 -148758433 - L1PA16 LINE L1 -1792 5812 5407 787 260 68 7 chr5 50871722 50872014 -148758136 - L1PA16 LINE L1 -5090 2491 2182 357 260 10 0 chr5 50872215 50872311 -148757839 - L1PA16 LINE L1 -5399 2182 2086 1033 322 54 44 chr5 50872407 50873018 -148757132 - L1PA16 LINE L1 -6170 1404 788 23 0 0 0 chr5 50873160 50873183 -148756967 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 50874089 50874110 -148756040 + AT_rich Low_complexity Low_complexity 1 21 0 291 314 20 19 chr5 50874607 50874713 -148755437 + MIR3 SINE MIR 71 177 -31 635 190 0 17 chr5 50874713 50874829 -148755321 + FLAM_A SINE Alu 1 114 -19 242 189 0 81 chr5 50875962 50876036 -148754114 + L1ME LINE L1 5750 5817 -347 23 0 0 0 chr5 50877507 50877530 -148752620 + AT_rich Low_complexity Low_complexity 1 23 0 462 254 129 68 chr5 50877649 50877896 -148752254 - MIR SINE MIR -6 256 5 387 301 123 6 chr5 50877899 50878062 -148752088 - MIR SINE MIR -79 183 2 2401 75 7 0 chr5 50880374 50880681 -148749469 + AluSc SINE Alu 1 309 0 21 0 0 0 chr5 50881969 50881990 -148748160 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 50882445 50882476 -148747674 + AT_rich Low_complexity Low_complexity 1 31 0 604 226 52 61 chr5 50883629 50883841 -148746309 + MER63A DNA MER1_type 1 210 0 252 0 0 0 chr5 50883877 50883905 -148746245 + (TAGA)n Simple_repeat Simple_repeat 3 30 0 261 209 0 0 chr5 50884446 50884513 -148745637 + (TA)n Simple_repeat Simple_repeat 2 68 0 25 65 0 0 chr5 50888067 50888113 -148742037 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr5 50888797 50888832 -148741318 + AT_rich Low_complexity Low_complexity 1 35 0 940 242 8 6 chr5 50889216 50889538 -148740612 + L1MEc LINE L1 2153 2432 -3783 639 342 4 4 chr5 50890755 50890980 -148739170 - MIR SINE MIR -7 255 31 219 170 19 57 chr5 50891068 50891121 -148739029 + L2 LINE L2 3263 3313 0 2223 172 15 128 chr5 50891137 50891221 -148738929 - MLT2B1 LTR ERVL 0 520 428 441 0 0 0 chr5 50891221 50891270 -148738880 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 0 0 0 chr5 50891269 50891293 -148738857 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 2223 172 15 128 chr5 50891270 50891794 -148738356 - MLT2B1 LTR ERVL -92 428 1 7153 161 9 14 chr5 50891794 50893075 -148737075 - ERVL-B1 LTR ERVL -7 5757 4483 318 330 78 31 chr5 50893144 50893335 -148736815 - L3 LINE CR1 -6 1571 1372 2241 116 0 0 chr5 50893662 50893955 -148736195 + AluSx SINE Alu 1 293 -19 14997 88 9 2 chr5 50894307 50897198 -148732952 - L1PA7 LINE L1 -8 6146 3233 2018 132 3 7 chr5 50898095 50898398 -148731752 + AluSx SINE Alu 1 302 -10 188 247 14 82 chr5 50898699 50898772 -148731378 + L2 LINE L2 2976 3043 -229 22 35 0 0 chr5 50899985 50900014 -148730136 + AT_rich Low_complexity Low_complexity 1 29 0 198 284 55 46 chr5 50900844 50900953 -148729197 + MIR SINE MIR 112 221 -41 22 0 0 0 chr5 50902024 50902046 -148728104 + AT_rich Low_complexity Low_complexity 1 22 0 219 234 16 78 chr5 50904481 50904545 -148725605 + L2 LINE L2 3143 3202 -70 598 110 30 10 chr5 50906318 50906418 -148723732 + L1MC1 LINE L1 6232 6333 0 27 81 0 0 chr5 50907183 50907245 -148722905 + AT_rich Low_complexity Low_complexity 1 62 0 436 224 12 73 chr5 50909883 50910048 -148720102 + FRAM SINE Alu 1 151 -25 1470 208 120 3 chr5 50911263 50911614 -148718536 - MSTD LTR MaLR 0 396 5 578 281 33 54 chr5 50911807 50911965 -148718185 + MIR SINE MIR 2 155 -107 1832 145 13 40 chr5 50911965 50912268 -148717882 + AluSx SINE Alu 1 295 -17 578 281 33 54 chr5 50912268 50912351 -148717799 + MIR SINE MIR 155 238 -24 252 288 127 17 chr5 50913052 50913170 -148716980 - MIR SINE MIR -65 197 67 336 352 47 0 chr5 50914170 50914298 -148715852 + MIR SINE MIR 71 204 -58 709 221 31 79 chr5 50914732 50914986 -148715164 - MIR SINE MIR 0 262 21 334 208 39 13 chr5 50914990 50915067 -148715083 - MER58 DNA MER1_type 0 2420 2342 255 243 48 58 chr5 50915153 50915256 -148714894 - MIR SINE MIR -54 208 107 1484 69 0 21 chr5 50915367 50915556 -148714594 - AluY SINE Alu -126 185 1 2120 114 7 10 chr5 50915793 50916091 -148714059 - AluSg SINE Alu -13 297 1 306 279 149 32 chr5 50917909 50918063 -148712087 + MIR SINE MIR 21 192 -70 447 313 22 0 chr5 50921216 50921350 -148708800 + MIR SINE MIR 40 176 -86 320 291 97 29 chr5 50923586 50923761 -148706389 + MIR SINE MIR 10 196 -66 586 184 36 18 chr5 50923910 50924078 -148706072 - ERVL LTR ERVL -630 5134 4964 197 225 0 0 chr5 50924092 50924132 -148706018 - L2 LINE L2 -7 3265 3226 1200 124 40 0 chr5 50924264 50924466 -148705684 - ERVL LTR ERVL -789 4975 4766 253 216 112 0 chr5 50924476 50924561 -148705589 - MLT2B2 LTR ERVL -143 372 239 1995 125 14 0 chr5 50924561 50924842 -148705308 + AluY SINE Alu 1 285 -26 1659 170 10 29 chr5 50931478 50931784 -148698366 + AluJb SINE Alu 1 300 -12 298 320 67 42 chr5 50935108 50935392 -148694758 - HAL1b LINE L1 -837 511 221 228 218 18 55 chr5 50936239 50936349 -148693801 + T-rich Low_complexity Low_complexity 3 108 0 749 234 30 10 chr5 50936795 50936992 -148693158 + MER2 DNA MER2_type 1 201 -144 615 239 81 62 chr5 50936992 50937251 -148692899 + MER21B LTR ERV1 395 658 -205 1929 221 55 4 chr5 50937257 50937751 -148692399 - L1 LINE L1 -760 5386 4868 1914 104 60 27 chr5 50940870 50941169 -148688981 - AluSx SINE Alu -3 309 1 780 153 69 0 chr5 50941188 50941332 -148688818 - L1MB2 LINE L1 -342 5829 5676 502 275 62 6 chr5 50942794 50942954 -148687196 - MER5B DNA MER1_type -9 169 1 38 39 0 0 chr5 50944338 50944390 -148685760 + AT_rich Low_complexity Low_complexity 1 52 0 222 0 51 26 chr5 50944458 50944497 -148685653 + (CTA)n Simple_repeat Simple_repeat 3 42 0 229 35 53 53 chr5 50944618 50944675 -148685475 + (CTA)n Simple_repeat Simple_repeat 3 59 0 186 67 67 0 chr5 50944691 50944736 -148685414 + (TA)n Simple_repeat Simple_repeat 1 48 0 2089 108 7 0 chr5 50944736 50945023 -148685127 - AluSx SINE Alu -23 289 1 17266 109 10 3 chr5 50945305 50947845 -148682305 - L1P3 LINE L1 -2369 4092 1534 * 40257 71 11 10 chr5 50947829 50953973 -148676177 - L1PA5 LINE L1 0 6154 2 11756 91 1 16 chr5 50953969 50955560 -148674590 - L1P3 LINE L1 -4892 1569 3 * 1343 232 50 6 chr5 50955801 50956163 -148673987 + L1ME1 LINE L1 5765 6142 -24 223 288 68 68 chr5 50956884 50957016 -148673134 + L2 LINE L2 3136 3267 -5 1891 193 21 13 chr5 50957582 50957961 -148672189 - L1ME1 LINE L1 -6 6160 5779 22 35 0 0 chr5 50958277 50958306 -148671844 + AT_rich Low_complexity Low_complexity 1 29 0 1167 207 155 37 chr5 50958943 50959266 -148670884 - MLT1A1 LTR MaLR -3 362 2 2054 121 7 36 chr5 50959664 50959969 -148670181 + AluSx SINE Alu 1 296 -16 252 290 0 0 chr5 50960151 50960213 -148669937 + L2 LINE L2 3252 3313 0 297 264 0 55 chr5 50961563 50961654 -148668496 - L2 LINE L2 -1 3312 3227 320 125 0 0 chr5 50961772 50961820 -148668330 - MADE1 DNA Mariner 0 80 33 205 175 0 0 chr5 50961909 50961949 -148668201 + CT-rich Low_complexity Low_complexity 1 40 0 1580 159 33 18 chr5 50962056 50962332 -148667818 + AluJo SINE Alu 26 305 -7 25 51 0 0 chr5 50962965 50963004 -148667146 + AT_rich Low_complexity Low_complexity 1 39 0 181 318 158 64 chr5 50963335 50963646 -148666504 - L2 LINE L2 -410 2904 2565 749 176 27 8 chr5 50963952 50964126 -148666024 + Charlie1a DNA MER1_type 36 258 -1197 1890 180 90 2 chr5 50964150 50964551 -148665599 + Charlie1a DNA MER1_type 880 1315 -140 240 91 0 0 chr5 50964548 50964581 -148665569 + Charlie1a DNA MER1_type 1417 1449 -6 * 280 169 0 17 chr5 50964661 50964720 -148665430 - Charlie1a DNA MER1_type -1 1454 1397 198 0 0 0 chr5 50965875 50965897 -148664253 + (CA)n Simple_repeat Simple_repeat 1 22 0 201 216 0 81 chr5 50966383 50966457 -148663693 + (CGGGG)n Simple_repeat Simple_repeat 2 69 0 303 104 0 0 chr5 50966965 50967013 -148663137 + (CA)n Simple_repeat Simple_repeat 2 49 0 261 337 69 11 chr5 50969145 50969320 -148660830 + L2 LINE L2 1536 1720 -1594 264 303 248 22 chr5 50969328 50969972 -148660178 + L2 LINE L2 1990 2779 -535 209 182 18 0 chr5 50970040 50970095 -148660055 + (CA)n Simple_repeat Simple_repeat 2 57 0 346 287 206 22 chr5 50971578 50971850 -148658300 + MLT1L LTR MaLR 168 489 -126 1039 306 97 46 chr5 50972339 50973173 -148656977 - L2 LINE L2 -496 2818 1942 21 57 0 0 chr5 50975106 50975141 -148655009 + AT_rich Low_complexity Low_complexity 1 35 0 2030 103 60 20 chr5 50975352 50975652 -148654498 + AluSx SINE Alu 1 312 0 238 232 174 14 chr5 50976379 50976448 -148653702 + L2 LINE L2 3184 3263 -9 242 185 0 77 chr5 50976487 50976552 -148653598 - L1ME3A LINE L1 -5 6165 6106 2005 225 30 2 chr5 50976570 50977010 -148653140 - LTR40c LTR ERVL -13 452 1 231 227 11 80 chr5 50977040 50977128 -148653022 - L1ME3 LINE L1 -88 6074 5993 332 317 48 0 chr5 50977215 50977360 -148652790 - L1ME3 LINE L1 -219 5951 5800 463 221 138 47 chr5 50977408 50977662 -148652488 - L1M4 LINE L1 -2186 3960 3684 323 242 48 11 chr5 50977690 50977878 -148652272 - L1MDb LINE L1 -5104 1302 1128 2191 133 7 0 chr5 50978056 50978365 -148651785 - AluSx SINE Alu 0 312 2 415 125 31 0 chr5 50978408 50978472 -148651678 + U4 snRNA snRNA 1 66 -79 1044 194 5 30 chr5 50978746 50978947 -148651203 + AluJo SINE Alu 30 225 -87 198 0 0 0 chr5 50978978 50979000 -148651150 + (A)n Simple_repeat Simple_repeat 1 22 0 21 36 0 0 chr5 50979207 50979235 -148650915 + AT_rich Low_complexity Low_complexity 1 28 0 401 270 42 48 chr5 50979746 50979935 -148650215 - L1ME3 LINE L1 -351 5770 5583 185 242 15 76 chr5 50980098 50980164 -148649986 - L3b LINE CR1 -9 1574 1513 448 273 14 28 chr5 50980458 50980601 -148649549 - MLT1G LTR MaLR 0 542 402 786 242 87 38 chr5 50980627 50980891 -148649259 - MLT1G LTR MaLR -304 286 10 769 176 0 22 chr5 50980943 50981079 -148649071 - FLAM_C SINE Alu 0 133 1 886 185 0 110 chr5 50981111 50981338 -148648812 - MER20 DNA MER1_type -17 202 1 264 30 0 0 chr5 50982022 50982055 -148648095 + (T)n Simple_repeat Simple_repeat 1 33 0 1754 126 8 0 chr5 50982463 50982717 -148647433 + AluSx SINE Alu 42 297 -15 361 294 110 12 chr5 50982804 50982967 -148647183 - MIR SINE MIR 0 262 84 2180 75 14 7 chr5 50983067 50983347 -148646803 + L1PA10 LINE L1 5877 6158 -10 442 223 11 11 chr5 50983708 50983802 -148646348 - L2 LINE L2 -5 3308 3215 281 232 29 14 chr5 50983814 50983883 -148646267 + MER69 DNA AcHobo 1 70 -2456 851 282 101 11 chr5 50983970 50984335 -148645815 + MER69 DNA AcHobo 1914 2311 -215 220 204 23 0 chr5 50984609 50984653 -148645497 + GA-rich Low_complexity Low_complexity 1 45 0 1792 196 30 48 chr5 50985192 50985589 -148644561 - MLT1B LTR MaLR 0 390 1 1758 210 24 22 chr5 50985930 50986345 -148643805 - LTR40c LTR ERVL 0 465 50 354 286 20 20 chr5 50986346 50986444 -148643706 + MLT1D LTR MaLR 1 98 -407 1223 190 78 24 chr5 50986449 50986781 -148643369 + MLT1D-int LTR MaLR 248 597 -774 22 0 0 0 chr5 50986781 50986803 -148643347 + AT_rich Low_complexity Low_complexity 1 22 0 622 205 24 16 chr5 50986809 50987104 -148643046 + MLT1A2 LTR MaLR 1 362 -12 2485 232 83 50 chr5 50987138 50987876 -148642274 + MLT1D-int LTR MaLR 609 1370 -1 1457 192 156 37 chr5 50987878 50988315 -148641835 + MLT1D LTR MaLR 14 502 -3 235 214 0 36 chr5 50988316 50988372 -148641778 - LTR40c LTR ERVL -410 55 2 24 32 0 0 chr5 50989504 50989535 -148640615 + AT_rich Low_complexity Low_complexity 1 31 0 16308 202 15 9 chr5 50989619 50994854 -148635296 - L1P4 LINE L1 -404 6412 1132 3020 228 40 55 chr5 50994861 50995764 -148634386 - L1P4 LINE L1 -5898 889 1 2130 105 0 7 chr5 50995903 50996238 -148633912 + AluSx SINE Alu 1 333 0 28 48 0 0 chr5 50996271 50996313 -148633837 + AT_rich Low_complexity Low_complexity 1 42 0 2372 173 33 54 chr5 50996407 50996658 -148633492 + MER44D DNA MER2_type 41 296 -2191 2029 136 0 0 chr5 50996658 50996952 -148633198 - AluSx SINE Alu -18 294 1 2372 173 33 54 chr5 50996952 50997221 -148632929 + MER44D DNA MER2_type 296 605 0 202 339 46 0 chr5 50997229 50997294 -148632856 + L2 LINE L2 3245 3312 -1 2149 111 3 40 chr5 50997768 50998120 -148632030 - AluSx SINE Alu 0 340 1 819 210 32 6 chr5 50999335 50999492 -148630658 - FRAM SINE Alu -16 160 1 1377 193 20 0 chr5 50999697 50999951 -148630199 - AluJo SINE Alu -11 301 43 438 320 150 20 chr5 51000414 51000761 -148629389 + L2 LINE L2 2916 3307 -6 285 295 0 66 chr5 51001234 51001356 -148628794 + MIR SINE MIR 82 195 -67 308 270 102 22 chr5 51001425 51001562 -148628588 + L1ME4a LINE L1 5956 6103 -18 655 277 183 24 chr5 51001588 51002031 -148628119 - L2 LINE L2 -54 3259 2748 340 307 74 70 chr5 51003529 51003744 -148626406 + MIR SINE MIR 47 262 0 1853 179 3 0 chr5 51004926 51005227 -148624923 + AluJo SINE Alu 1 302 -10 999 302 180 17 chr5 51005702 51006116 -148624034 + L2 LINE L2 2223 2568 -745 2229 117 0 0 chr5 51006116 51006415 -148623735 + AluSx SINE Alu 1 299 -13 999 302 180 17 chr5 51006415 51006933 -148623217 + L2 LINE L2 2568 3313 0 22 0 0 0 chr5 51009287 51009309 -148620841 + AT_rich Low_complexity Low_complexity 1 22 0 411 326 16 0 chr5 51009532 51009661 -148620489 - MIR SINE MIR -72 190 60 31 0 0 0 chr5 51009748 51009779 -148620371 + AT_rich Low_complexity Low_complexity 1 31 0 267 296 12 0 chr5 51009955 51010036 -148620114 + MIR SINE MIR 36 117 -91 2168 106 3 7 chr5 51010112 51010405 -148619745 + AluSx SINE Alu 1 292 -20 233 29 0 29 chr5 51010706 51010741 -148619409 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 1041 171 0 12 chr5 51010741 51010891 -148619259 - AluSg/x SINE Alu -29 281 132 2186 101 10 7 chr5 51010891 51011188 -148618962 - AluY SINE Alu -13 298 1 1041 171 0 12 chr5 51011188 51011201 -148618949 - AluSg/x SINE Alu -178 132 120 585 112 22 0 chr5 51011458 51011547 -148618603 + AluSg/x SINE Alu 205 295 -17 231 277 21 32 chr5 51012095 51012189 -148617961 + MIR SINE MIR 120 212 -50 1392 272 102 33 chr5 51012996 51013170 -148616980 + L2 LINE L2 2304 2464 -849 315 0 0 0 chr5 51013170 51013205 -148616945 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 1392 272 102 33 chr5 51013205 51013946 -148616204 + L2 LINE L2 2464 3282 -31 250 294 200 0 chr5 51013949 51014034 -148616116 + MER91C DNA MER1_type 4 105 -35 342 321 61 8 chr5 51015774 51015905 -148614245 + MIR3 SINE MIR 9 146 -62 1836 166 7 14 chr5 51015934 51016223 -148613927 + AluSx SINE Alu 1 287 -25 1733 118 19 15 chr5 51016623 51016894 -148613256 + AluSx SINE Alu 37 308 -4 21 36 0 0 chr5 51018164 51018192 -148611958 + AT_rich Low_complexity Low_complexity 1 28 0 218 215 200 0 chr5 51018602 51018667 -148611483 + MIR SINE MIR 185 262 0 1526 116 66 53 chr5 51018698 51019018 -148611132 + MER33 DNA MER1_type 1 324 0 273 333 11 0 chr5 51020101 51020194 -148609956 + L2 LINE L2 3215 3308 -5 192 226 87 61 chr5 51020184 51020299 -148609851 - L2 LINE L2 -1313 2001 1884 * 23 0 0 0 chr5 51020469 51020492 -148609658 + AT_rich Low_complexity Low_complexity 1 23 0 2351 103 3 3 chr5 51021122 51021434 -148608716 + AluSx SINE Alu 1 312 0 2275 108 0 13 chr5 51023038 51023354 -148606796 + AluSx SINE Alu 1 312 0 220 267 0 0 chr5 51023808 51023853 -148606297 + polypurine Low_complexity Low_complexity 2 46 0 535 254 11 5 chr5 51024993 51025141 -148605009 - MIR SINE MIR -9 253 106 2321 110 0 0 chr5 51026142 51026441 -148603709 - AluSq SINE Alu -14 299 1 188 194 14 139 chr5 51027608 51027680 -148602470 + L2 LINE L2 3191 3253 -19 954 82 5 223 chr5 51029215 51029618 -148600532 - L1PA7 LINE L1 0 6154 5840 186 346 144 33 chr5 51029777 51030383 -148599767 + L2 LINE L2 1855 2527 -787 204 128 0 26 chr5 51030964 51031003 -148599147 + (TC)n Simple_repeat Simple_repeat 2 39 0 225 321 47 9 chr5 51031051 51031157 -148598993 - L2 LINE L2 -5 3308 3199 488 273 73 77 chr5 51031619 51031905 -148598245 + L1MC4a LINE L1 5575 5859 -1949 1380 90 20 10 chr5 51031944 51032145 -148598005 + L1PB1 LINE L1 5946 6148 -3 513 282 49 73 chr5 51033457 51033796 -148596354 + L1ME LINE L1 5294 5622 -499 206 288 0 0 chr5 51035117 51035176 -148594974 + (TG)n Simple_repeat Simple_repeat 1 59 0 373 310 43 9 chr5 51037669 51037785 -148592365 - MIR SINE MIR -140 122 3 192 152 0 0 chr5 51037802 51037835 -148592315 - L2 LINE L2 0 3313 3281 287 292 143 24 chr5 51038337 51038546 -148591604 - MIR SINE MIR -6 256 23 493 295 35 29 chr5 51039644 51039817 -148590333 + MER5A DNA MER1_type 13 186 -3 182 198 259 37 chr5 51039840 51039921 -148590229 + L2 LINE L2 3168 3266 -6 21 0 0 0 chr5 51041683 51041704 -148588446 + AT_rich Low_complexity Low_complexity 1 21 0 1467 188 9 52 chr5 51041732 51042057 -148588093 - AluJo SINE Alu -1 311 1 644 287 56 50 chr5 51042436 51042757 -148587393 - L2 LINE L2 0 3313 2991 21 57 0 0 chr5 51046179 51046214 -148583936 + AT_rich Low_complexity Low_complexity 1 35 0 428 260 0 0 chr5 51046531 51046627 -148583523 - MIR SINE MIR -130 132 37 193 304 58 0 chr5 51046666 51046735 -148583415 - MIR SINE MIR -19 243 171 264 359 141 6 chr5 51046793 51046963 -148583187 + MIR SINE MIR 60 252 -10 229 325 91 45 chr5 51048129 51048283 -148581867 + MER5A DNA MER1_type 7 167 -22 224 310 86 63 chr5 51048142 51048316 -148581834 - MER5A DNA MER1_type -5 184 7 * 638 219 0 8 chr5 51049401 51049529 -148580621 + L2 LINE L2 3187 3313 0 198 0 0 0 chr5 51051159 51051181 -148578969 + (A)n Simple_repeat Simple_repeat 1 22 0 222 234 0 0 chr5 51052931 51052978 -148577172 + L2 LINE L2 3251 3297 -16 238 245 19 0 chr5 51054230 51054283 -148575867 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 287 217 184 72 chr5 51054283 51054490 -148575660 - L1MC4a LINE L1 -1878 5930 5701 209 195 0 0 chr5 51055601 51055642 -148574508 - L2 LINE L2 0 3272 3232 1075 165 11 0 chr5 51056196 51056378 -148573772 - MER5A DNA MER1_type -2 187 4 318 270 45 36 chr5 51056982 51057093 -148573057 - MIR SINE MIR -10 252 141 21 0 0 0 chr5 51057099 51057120 -148573030 + AT_rich Low_complexity Low_complexity 1 21 0 484 269 50 14 chr5 51057222 51057363 -148572787 - MIR SINE MIR -112 150 5 857 71 95 8 chr5 51057428 51057554 -148572596 - MER85 DNA T2_type 0 139 3 427 280 11 79 chr5 51058215 51058404 -148571746 + MER5B DNA MER1_type 3 178 0 270 113 306 16 chr5 51059060 51059122 -148571028 - MADE1 DNA Mariner 0 80 1 188 326 0 22 chr5 51059434 51059480 -148570670 + L2 LINE L2 3249 3293 -20 1956 150 24 24 chr5 51059725 51060104 -148570046 - L1MC1 LINE L1 0 6333 5955 342 316 38 61 chr5 51060139 51060484 -148569666 - L1MC1 LINE L1 -304 5817 5481 204 227 114 57 chr5 51060856 51060944 -148569206 + MER5A DNA MER1_type 31 123 -66 1869 150 14 7 chr5 51063134 51063428 -148566722 - AluSx SINE Alu -16 296 1 275 304 68 20 chr5 51063858 51064006 -148566144 - MER5B DNA MER1_type -6 172 18 436 67 0 180 chr5 51065582 51065625 -148564525 + MADE1 DNA Mariner 8 29 -51 2306 119 0 0 chr5 51065625 51065937 -148564213 + AluSx SINE Alu 1 312 0 436 67 0 180 chr5 51065937 51065982 -148564168 + MADE1 DNA Mariner 29 80 0 255 320 13 13 chr5 51067038 51067116 -148563034 + MIR3 SINE MIR 89 166 -42 323 237 86 0 chr5 51069229 51069322 -148560828 - MER5A DNA MER1_type -86 103 3 315 330 28 0 chr5 51069424 51069530 -148560620 + MIR3 SINE MIR 90 198 -10 28 0 0 0 chr5 51069835 51069863 -148560287 + AT_rich Low_complexity Low_complexity 1 28 0 704 181 17 0 chr5 51069912 51070028 -148560122 + FLAM_A SINE Alu 5 122 -11 2259 101 10 0 chr5 51070050 51070348 -148559802 + AluSg SINE Alu 1 301 -9 946 135 9 112 chr5 51070603 51070818 -148559332 - MER20 DNA MER1_type 0 219 27 302 248 193 19 chr5 51072181 51072342 -148557808 + MER5A DNA MER1_type 1 189 0 406 83 125 14 chr5 51072800 51072872 -148557278 + FLAM_A SINE Alu 31 110 -32 324 128 0 0 chr5 51074559 51074606 -148555544 + L2 LINE L2 3264 3310 -3 1109 128 56 0 chr5 51074806 51075002 -148555148 + L1MA9 LINE L1 6106 6312 0 21 0 0 0 chr5 51075314 51075335 -148554815 + AT_rich Low_complexity Low_complexity 1 21 0 845 220 51 95 chr5 51079580 51079891 -148550259 - LTR56 LTR ERV1 -25 420 132 2211 112 0 16 chr5 51079891 51080196 -148549954 + AluSx SINE Alu 5 304 -8 845 220 51 95 chr5 51080196 51080315 -148549835 - LTR56 LTR ERV1 -313 132 9 211 200 71 29 chr5 51080736 51080806 -148549344 - MIR SINE MIR -17 245 173 * 260 349 61 75 chr5 51080787 51081228 -148548922 - L2 LINE L2 -2 3270 2836 184 255 0 0 chr5 51081268 51081315 -148548835 - MIR SINE MIR -128 134 88 351 291 63 13 chr5 51081963 51082121 -148548029 - L1M4 LINE L1 -2052 4094 3929 5425 125 30 5 chr5 51082493 51083885 -148546265 + L1PA13 LINE L1 4686 6107 -56 269 228 16 150 chr5 51083918 51084045 -148546105 + MIR SINE MIR 63 172 -90 180 0 0 0 chr5 51086770 51086790 -148543360 + (CGGGGG)n Simple_repeat Simple_repeat 1 20 0 324 325 170 24 chr5 51086909 51087121 -148543029 + L1M2 LINE L1 709 951 -5898 1565 130 43 70 chr5 51087373 51087674 -148542476 - MER4A LTR ERV1 0 664 372 240 156 22 22 chr5 51087728 51087773 -148542377 - MER4A LTR ERV1 -566 98 54 267 293 50 0 chr5 51088321 51088420 -148541730 + HAL1b LINE L1 280 383 -965 475 244 108 67 chr5 51088459 51088775 -148541375 + HAL1b LINE L1 446 774 -574 421 251 80 0 chr5 51088795 51088982 -148541168 + HAL1b LINE L1 890 1091 -257 309 229 125 52 chr5 51088983 51089146 -148541004 - L1MC/D LINE L1 -885 5459 5294 254 211 0 0 chr5 51089559 51089611 -148540539 + LTR30 LTR ERV1 1 52 -670 1332 80 125 0 chr5 51089611 51089811 -148540339 + LTR12 LTR ERV1 53 277 -437 331 255 10 0 chr5 51089811 51089909 -148540241 + LTR30 LTR ERV1 544 642 -80 636 94 42 0 chr5 51089912 51090008 -148540142 + LTR12 LTR ERV1 615 714 0 2167 157 50 0 chr5 51090095 51090477 -148539673 - MER57A LTR ERV1 0 403 3 27 29 0 0 chr5 51091045 51091079 -148539071 + AT_rich Low_complexity Low_complexity 1 34 0 1380 236 73 104 chr5 51091112 51092075 -148538075 - LTR1B LTR ERV1 -1 1019 1 2313 82 0 7 chr5 51092658 51092952 -148537198 - AluSx SINE Alu -12 300 9 1669 190 34 14 chr5 51093393 51093751 -148536399 + MLT1A1 LTR MaLR 1 365 0 884 235 33 0 chr5 51093889 51094102 -148536048 - MER58A DNA MER1_type 0 224 5 806 207 48 16 chr5 51094573 51094761 -148535389 + MER3 DNA MER1_type 1 194 -15 596 294 71 31 chr5 51094813 51095451 -148534699 + HAL1b LINE L1 77 766 -582 304 318 45 0 chr5 51095496 51095628 -148534522 - LTR16A1 LTR ERVL -3 454 317 335 158 37 12 chr5 51095739 51095821 -148534329 + HAL1 LINE L1 94 177 -2330 1663 198 54 8 chr5 51095913 51096414 -148533736 - LTR27 LTR ERV1 0 501 3 404 261 31 36 chr5 51096546 51096741 -148533409 + L1M4 LINE L1 2255 2448 -3698 2038 259 43 6 chr5 51096747 51097368 -148532782 - L1MEc LINE L1 -5707 689 46 303 28 0 0 chr5 51097719 51097755 -148532395 + (TC)n Simple_repeat Simple_repeat 1 36 0 1109 189 28 9 chr5 51098906 51099118 -148531032 + AluJo SINE Alu 82 297 -15 381 346 112 19 chr5 51099156 51099370 -148530780 - MIR SINE MIR -6 256 23 1843 175 0 19 chr5 51099596 51099910 -148530240 - AluJo SINE Alu -4 308 1 346 344 86 5 chr5 51100102 51100288 -148529862 - L3 LINE CR1 -11 1566 1366 1815 143 29 7 chr5 51100333 51100613 -148529537 + AluJo SINE Alu 1 286 -26 27 0 0 0 chr5 51101359 51101386 -148528764 + AT_rich Low_complexity Low_complexity 1 27 0 2183 116 0 7 chr5 51101386 51101687 -148528463 + AluSx SINE Alu 1 299 -13 309 250 0 0 chr5 51102015 51102107 -148528043 + (TA)n Simple_repeat Simple_repeat 1 92 0 211 130 78 13 chr5 51102400 51102432 -148527718 + (TA)n Simple_repeat Simple_repeat 2 30 -53 2437 128 22 0 chr5 51102432 51102799 -148527351 + THE1C LTR MaLR 1 375 0 211 130 78 13 chr5 51102799 51102843 -148527307 + (TA)n Simple_repeat Simple_repeat 30 83 0 482 304 55 17 chr5 51102864 51103045 -148527105 - MIR SINE MIR -60 202 15 255 242 32 48 chr5 51103462 51103586 -148526564 + MLT1K LTR MaLR 439 560 -28 24 0 0 0 chr5 51104983 51105007 -148525143 + AT_rich Low_complexity Low_complexity 1 24 0 681 258 70 64 chr5 51105120 51105364 -148524786 - MER102b DNA MER1_type -1096 332 84 2796 10 0 3 chr5 51105364 51105672 -148524478 - AluYb8 SINE Alu -11 307 1 681 258 70 64 chr5 51105672 51105757 -148524393 - MER102b DNA MER1_type -1344 84 1 2277 113 6 3 chr5 51106388 51106699 -148523451 - AluSx SINE Alu 0 312 1 1386 251 78 37 chr5 51106727 51107417 -148522733 + L2 LINE L2 2596 3311 -2 23 0 0 0 chr5 51107531 51107554 -148522596 + AT_rich Low_complexity Low_complexity 1 23 0 2620 114 3 8 chr5 51108368 51108745 -148521405 - THE1C LTR MaLR 0 375 1 2000 150 0 3 chr5 51109828 51110128 -148520022 + AluSx SINE Alu 1 299 -13 409 278 148 24 chr5 51110155 51110446 -148519704 - MLT1L LTR MaLR -72 543 217 288 170 0 0 chr5 51110796 51110849 -148519301 + (TA)n Simple_repeat Simple_repeat 1 53 0 546 280 175 0 chr5 51111790 51111979 -148518171 + MIR SINE MIR 3 224 -38 385 204 38 0 chr5 51111989 51112121 -148518029 + (CTA)n Simple_repeat Simple_repeat 2 138 0 1683 279 45 63 chr5 51112219 51112915 -148517235 + L2 LINE L2 1944 2626 -688 619 269 24 63 chr5 51112936 51113085 -148517065 + MLT1H LTR MaLR 20 156 -393 2330 68 4 0 chr5 51113085 51113364 -148516786 + AluSp SINE Alu 25 304 -9 619 269 24 63 chr5 51113364 51113467 -148516683 + MLT1H LTR MaLR 156 262 -287 427 265 123 0 chr5 51113518 51113688 -148516462 + MLT1H LTR MaLR 359 549 0 1044 248 83 50 chr5 51113689 51114230 -148515920 + L2 LINE L2 2624 3184 -129 259 93 0 111 chr5 51114244 51114298 -148515852 - MLT2D LTR ERVL 0 464 417 317 229 0 21 chr5 51114299 51114395 -148515755 + (TATATG)n Simple_repeat Simple_repeat 5 98 0 259 62 0 125 chr5 51114410 51114458 -148515692 + MLT2C1 LTR ERVL 350 391 -6 585 220 8 8 chr5 51114458 51114464 -148515686 + (TA)n Simple_repeat Simple_repeat 1 6 -283 222 37 0 0 chr5 51114464 51114491 -148515659 + (CA)n Simple_repeat Simple_repeat 2 28 0 585 220 8 8 chr5 51114491 51114747 -148515403 + (TA)n Simple_repeat Simple_repeat 5 289 0 2000 161 11 3 chr5 51114758 51115111 -148515039 - MLT2D LTR ERVL -58 356 1 356 319 95 0 chr5 51115115 51115231 -148514919 + L2 LINE L2 3186 3312 -1 2256 108 6 13 chr5 51116294 51116608 -148513542 + AluSx SINE Alu 1 312 0 1599 101 0 5 chr5 51117921 51118129 -148512021 + AluSq SINE Alu 1 207 -106 41404 44 4 1 chr5 51118288 51124455 -148505695 + L1PA3 LINE L1 1 6176 0 506 313 16 2 chr5 51124538 51124710 -148505440 - MIR3 SINE MIR -10 198 18 182 226 132 0 chr5 51125348 51125401 -148504749 - L2 LINE L2 -4 3309 3250 252 247 149 75 chr5 51125918 51126092 -148504058 + MIR SINE MIR 27 213 -49 210 150 0 0 chr5 51126754 51126794 -148503356 + (A)n Simple_repeat Simple_repeat 1 40 0 25 31 0 0 chr5 51127047 51127079 -148503071 + AT_rich Low_complexity Low_complexity 1 32 0 1995 132 53 31 chr5 51128292 51128648 -148501502 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr5 51130329 51130363 -148499787 + AT_rich Low_complexity Low_complexity 1 34 0 360 319 65 32 chr5 51130638 51130854 -148499296 - HERV16 LTR ERVL -1524 4240 4018 2793 318 73 37 chr5 51130905 51132408 -148497742 - HERV16 LTR ERVL -1838 3926 2478 1020 224 145 20 chr5 51132408 51132760 -148497390 + MSTD LTR MaLR 1 396 0 2793 318 73 37 chr5 51132760 51132933 -148497217 - HERV16 LTR ERVL -3286 2478 2313 2162 141 0 0 chr5 51132933 51133237 -148496913 - AluSx SINE Alu -8 304 1 2793 318 73 37 chr5 51133237 51133629 -148496521 - HERV16 LTR ERVL -3451 2313 1730 1093 293 84 3 chr5 51133935 51134327 -148495823 - HERV16 LTR ERVL -3735 1261 838 1176 294 36 15 chr5 51134424 51134836 -148495314 - LTR16A LTR ERVL -14 436 16 951 230 44 60 chr5 51135502 51135885 -148494265 - MER20B DNA MER1_type -23 760 384 4069 210 38 27 chr5 51135898 51136164 -148493986 + L1MB3 LINE L1 4222 4484 -1699 1446 193 42 39 chr5 51136164 51136475 -148493675 + AluJb SINE Alu 1 312 0 4069 210 38 27 chr5 51136475 51137464 -148492686 + L1MB3 LINE L1 4484 5509 -674 1870 128 13 30 chr5 51137464 51137768 -148492382 + AluSx SINE Alu 14 312 0 4069 210 38 27 chr5 51137768 51138451 -148491699 + L1MB3 LINE L1 5509 6183 0 2220 93 24 3 chr5 51138534 51138824 -148491326 + AluSg SINE Alu 1 296 -14 706 260 85 60 chr5 51138863 51139228 -148490922 - MER20B DNA MER1_type -409 374 1 614 181 9 0 chr5 51139261 51139377 -148490773 - MLT1B LTR MaLR -3 387 271 1201 208 12 108 chr5 51139262 51139671 -148490479 - MLT1A2 LTR MaLR -4 370 1 1809 160 81 24 chr5 51139718 51140243 -148489907 - MLT2A2 LTR ERVL 0 554 1 2775 10 0 0 chr5 51140507 51140814 -148489336 - AluYa5 SINE Alu -4 307 1 192 317 17 17 chr5 51142230 51142290 -148487860 + L3 LINE CR1 1515 1574 -3 280 328 68 28 chr5 51142634 51142811 -148487339 - MIR3 SINE MIR -21 187 4 219 245 0 0 chr5 51142850 51142899 -148487251 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 373 318 114 15 chr5 51144269 51144470 -148485680 + MIR SINE MIR 23 243 -19 508 288 123 33 chr5 51144499 51144711 -148485439 + MIR SINE MIR 2 232 -30 21 36 0 0 chr5 51144750 51144778 -148485372 + AT_rich Low_complexity Low_complexity 1 28 0 570 312 63 5 chr5 51144875 51145064 -148485086 + MIR SINE MIR 5 204 -58 225 392 0 0 chr5 51148360 51148434 -148481716 + L2 LINE L2 3172 3245 -27 354 145 24 12 chr5 51149454 51149537 -148480613 + T-rich Low_complexity Low_complexity 1 84 0 396 0 0 0 chr5 51149692 51149736 -148480414 + (TTTCC)n Simple_repeat Simple_repeat 5 48 0 1944 128 4 0 chr5 51149736 51150010 -148480140 - AluSq SINE Alu -38 275 1 21 36 0 0 chr5 51150231 51150259 -148479891 + AT_rich Low_complexity Low_complexity 1 28 0 214 304 130 0 chr5 51151179 51151271 -148478879 + L2 LINE L2 2948 3051 -262 569 139 72 111 chr5 51151279 51151459 -148478691 + MLT1B LTR MaLR 1 173 -217 1390 201 51 17 chr5 51151462 51151755 -148478395 + AluJb SINE Alu 1 303 -9 393 149 0 0 chr5 51151762 51151829 -148478321 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 830 233 5 19 chr5 51151901 51152107 -148478043 + MLT1B LTR MaLR 184 386 -4 405 312 85 32 chr5 51152263 51152545 -148477605 - L2 LINE L2 -616 2698 2402 238 277 15 15 chr5 51152606 51152671 -148477479 - MER5A DNA MER1_type -1 188 124 374 235 13 54 chr5 51152679 51152828 -148477322 - L1M4 LINE L1 -1320 4826 4684 426 277 21 57 chr5 51152866 51153148 -148477002 + L1MCa LINE L1 1322 1593 -4833 571 231 0 0 chr5 51153149 51153257 -148476893 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3739 108 35 73 chr5 51153254 51154032 -148476118 + Tigger3(Golem) DNA MER2_type 2282 3029 0 1738 260 102 19 chr5 51154067 51154929 -148475221 + L1M4 LINE L1 3257 4258 -1888 264 247 62 12 chr5 51154932 51155013 -148475137 + MER69 DNA AcHobo 721 805 -1721 339 240 0 0 chr5 51155013 51155088 -148475062 + L1MC4 LINE L1 6618 6692 -1350 518 207 35 35 chr5 51155090 51155235 -148474915 + MER69 DNA AcHobo 2017 2161 -365 434 269 97 0 chr5 51155266 51155400 -148474750 - MIR3 SINE MIR -1 207 61 764 76 6 170 chr5 51155422 51155593 -148474557 + Tigger3(Golem) DNA MER2_type 2756 2898 -131 408 259 0 0 chr5 51155939 51156024 -148474126 + L2 LINE L2 3185 3269 -3 2137 131 131 31 chr5 51157847 51158236 -148471914 + MSTA LTR MaLR 1 428 0 180 386 0 0 chr5 51158303 51158373 -148471777 - L2 LINE L2 0 3272 3203 22 56 0 0 chr5 51159405 51159441 -148470709 + AT_rich Low_complexity Low_complexity 1 36 0 615 296 150 45 chr5 51159499 51160006 -148470144 - MLT1K LTR MaLR -16 572 13 397 342 37 27 chr5 51160440 51160735 -148469415 + LTR16C LTR ERVL 194 491 0 180 125 0 0 chr5 51161174 51161206 -148468944 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 476 320 78 27 chr5 51161602 51161821 -148468329 - MIR SINE MIR -31 231 2 1589 119 127 4 chr5 51161956 51162209 -148467941 + AluSg1 SINE Alu 13 296 -13 186 43 0 0 chr5 51162343 51162366 -148467784 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 28300 112 22 64 chr5 51162366 51166212 -148463938 - L1PA7 LINE L1 -17 6137 2130 2893 16 0 0 chr5 51166212 51166530 -148463620 - AluYb8 SINE Alu 0 318 1 28300 112 22 64 chr5 51166530 51166541 -148463609 - L1PA7 LINE L1 -4024 2130 2120 186 43 0 0 chr5 51166541 51166564 -148463586 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 28300 112 22 64 chr5 51166564 51169092 -148461058 - L1PA7 LINE L1 -4034 2120 33 1750 196 113 36 chr5 51169789 51170258 -148459892 + MLT1D LTR MaLR 1 505 0 337 264 140 60 chr5 51170258 51170440 -148459710 - MIR SINE MIR -60 202 9 249 327 110 46 chr5 51170476 51170757 -148459393 + L2 LINE L2 2970 3268 -4 567 237 29 7 chr5 51170880 51171019 -148459131 + MIR SINE MIR 100 241 -21 218 289 51 116 chr5 51172278 51172648 -148457502 - L2 LINE L2 -733 2581 2236 338 289 18 40 chr5 51172715 51172879 -148457271 - MIR SINE MIR -63 199 40 198 103 0 0 chr5 51173095 51173124 -148457026 + (A)n Simple_repeat Simple_repeat 1 29 0 290 176 44 0 chr5 51174021 51174089 -148456061 + MLT1J2 LTR MaLR 71 141 -309 502 313 15 0 chr5 51174305 51174436 -148455714 + MER91A DNA MER1_type 64 196 0 5505 79 19 7 chr5 51175832 51176589 -148453561 - MER4E LTR ERV1 0 766 1 216 0 0 0 chr5 51176868 51176892 -148453258 + (A)n Simple_repeat Simple_repeat 1 24 0 845 157 0 7 chr5 51177426 51177566 -148452584 - MER4E-int LTR ERV1 -106 6652 6514 252 323 0 0 chr5 51177597 51177656 -148452494 + LTR16B LTR ERVL 81 139 -325 2426 117 27 8 chr5 51177656 51178031 -148452119 + MER48 LTR ERV1 1 382 -5 30562 113 29 10 chr5 51178040 51180804 -148449346 + HERVH48 LTR ERV1 4 2904 -3750 2389 79 3 7 chr5 51180804 51181109 -148449041 + AluY SINE Alu 1 304 -7 30562 113 29 10 chr5 51181109 51183298 -148446852 + HERVH48 LTR ERV1 2904 5050 -1604 1160 181 118 25 chr5 51183298 51183536 -148446614 - AluJb SINE Alu -52 260 1 298 309 99 20 chr5 51183624 51183776 -148446374 + MIR3 SINE MIR 2 165 -43 4068 134 23 4 chr5 51184560 51185393 -148444757 - MER4E-int LTR ERV1 -244 6514 5626 2406 134 124 9 chr5 51185394 51186154 -148443996 - MER4E-int LTR ERV1 -1369 5389 4452 * 3671 160 40 3 chr5 51186153 51186783 -148443367 - MER4E-int LTR ERV1 -2670 4088 3436 11245 153 58 66 chr5 51186828 51189926 -148440224 - MER4E-int LTR ERV1 -3685 3073 1 5643 88 20 13 chr5 51189926 51190687 -148439463 - MER4E LTR ERV1 0 766 1 1731 160 11 28 chr5 51191493 51191676 -148438474 - AluSx SINE Alu 0 316 139 2095 125 7 0 chr5 51191676 51191971 -148438179 - AluJb SINE Alu -15 297 1 1731 160 11 28 chr5 51191971 51192108 -148438042 - AluSx SINE Alu -177 139 1 1736 153 110 26 chr5 51192379 51192725 -148437425 + THE1C LTR MaLR 1 375 0 633 345 28 2 chr5 51192795 51193178 -148436972 + LTR16A LTR ERVL 2 447 -3 184 135 108 27 chr5 51193341 51193378 -148436772 - L3 LINE CR1 -110 1467 1428 267 220 0 30 chr5 51193658 51193758 -148436392 + GA-rich Low_complexity Low_complexity 4 100 0 435 326 106 68 chr5 51193821 51194143 -148436007 - MER102b DNA MER1_type -1 340 7 1645 154 17 70 chr5 51194608 51194964 -148435186 - L1MB7 LINE L1 -19 6165 5829 2112 174 16 54 chr5 51194966 51195408 -148434742 - Tigger2a DNA MER2_type -1 433 9 986 149 144 0 chr5 51195415 51195603 -148434547 - L1MB7 LINE L1 -354 5830 5616 430 202 43 21 chr5 51195606 51195700 -148434450 - LTR12 LTR ERV1 -236 478 383 226 218 58 23 chr5 51195707 51195794 -148434356 - LTR30 LTR ERV1 -80 642 553 1356 270 66 53 chr5 51196013 51196892 -148433258 - HERV17 LTR ERV1 0 8626 7511 16826 234 15 2 chr5 51197908 51201132 -148429018 - HERV17 LTR ERV1 -1912 6345 3080 226 232 145 58 chr5 51201133 51201271 -148428879 + HAL1 LINE L1 1740 1889 -618 1682 173 0 0 chr5 51201271 51201531 -148428619 - HERV17 LTR ERV1 -5316 2941 2682 22082 55 1 1 chr5 51201539 51207615 -148422535 - L1PA4 LINE L1 -3 6152 1 6981 262 12 6 chr5 51207615 51209236 -148420914 - HERV17 LTR ERV1 -5341 3285 1655 1744 248 11 46 chr5 51209704 51210232 -148419918 - HERV17 LTR ERV1 -7699 558 18 916 212 88 22 chr5 51210252 51210478 -148419672 - LTR12 LTR ERV1 -236 478 238 1949 116 17 55 chr5 51210645 51210798 -148419352 - L1M4 LINE L1 -565 5619 5462 1697 180 34 0 chr5 51210798 51211092 -148419058 - AluJo SINE Alu -8 304 1 1949 116 17 55 chr5 51211092 51211284 -148418866 - L1M4 LINE L1 -722 5462 5287 261 0 0 0 chr5 51212196 51212225 -148417925 + (TA)n Simple_repeat Simple_repeat 2 30 0 300 83 0 0 chr5 51212225 51212273 -148417877 + (GA)n Simple_repeat Simple_repeat 1 48 0 2117 127 0 0 chr5 51212273 51212556 -148417594 - AluSq SINE Alu -30 283 1 252 0 0 0 chr5 51214347 51214375 -148415775 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 814 271 40 4 chr5 51215643 51215868 -148414282 + MIR SINE MIR 3 235 -27 2329 96 0 7 chr5 51215931 51216233 -148413917 - AluY SINE Alu -11 300 1 621 278 84 31 chr5 51216254 51216587 -148413563 - L1MC/D LINE L1 -364 5757 5404 264 283 0 0 chr5 51216599 51216652 -148413498 + L2 LINE L2 3191 3243 -29 213 175 0 0 chr5 51216682 51216722 -148413428 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 339 96 0 0 chr5 51219203 51219255 -148410895 + (TG)n Simple_repeat Simple_repeat 2 53 0 394 197 26 0 chr5 51219542 51219618 -148410532 + MER116 DNA Mariner 3 80 0 471 292 124 16 chr5 51219636 51219821 -148410329 + MIR SINE MIR 2 206 -56 32 26 0 0 chr5 51219821 51219860 -148410290 + AT_rich Low_complexity Low_complexity 1 39 0 276 258 39 62 chr5 51220532 51220660 -148409490 - MLT1K LTR MaLR -4 584 460 21 36 0 0 chr5 51222004 51222032 -148408118 + AT_rich Low_complexity Low_complexity 1 28 0 217 138 17 35 chr5 51222089 51222147 -148408003 + (CATA)n Simple_repeat Simple_repeat 2 58 0 1538 97 51 5 chr5 51222610 51222826 -148407324 - L1PA8 LINE L1 -9 6163 5938 695 231 0 15 chr5 51223012 51223142 -148407008 - FLAM_A SINE Alu -5 128 1 226 365 32 16 chr5 51225043 51225169 -148404981 + MIR3 SINE MIR 15 142 -66 620 263 191 36 chr5 51225245 51225580 -148404570 - MLT1J2 LTR MaLR -7 443 57 1748 153 41 6 chr5 51226030 51226344 -148403806 - MER45B DNA AcHobo -1 1039 715 489 246 79 0 chr5 51226597 51226723 -148403427 - MER45C DNA AcHobo -335 618 483 535 267 105 7 chr5 51226823 51226992 -148403158 - MER45 DNA AcHobo -788 165 3 200 253 92 58 chr5 51227682 51227769 -148402381 + MIR SINE MIR 42 131 -77 27 29 0 0 chr5 51227838 51227872 -148402278 + AT_rich Low_complexity Low_complexity 1 34 0 525 186 31 0 chr5 51228184 51228281 -148401869 - Tigger3b DNA MER2_type -3 1228 1129 4817 97 37 30 chr5 51228296 51228477 -148401673 - Tigger3b DNA MER2_type -2262 766 588 180 0 0 0 chr5 51228477 51228497 -148401653 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4817 97 37 30 chr5 51228497 51228789 -148401361 - Tigger3b DNA MER2_type -2440 588 299 2136 124 0 3 chr5 51228789 51229087 -148401063 + AluSx SINE Alu 1 297 -15 4817 97 37 30 chr5 51229087 51229372 -148400778 - Tigger3b DNA MER2_type -2729 299 2 211 270 16 16 chr5 51229578 51229641 -148400509 + MIR SINE MIR 170 232 -30 1323 199 76 57 chr5 51230228 51230595 -148399555 - MLT1A2 LTR MaLR 0 374 1 258 220 0 0 chr5 51231717 51231776 -148398374 + T-rich Low_complexity Low_complexity 1 59 0 342 0 0 0 chr5 51232371 51232409 -148397741 + (CA)n Simple_repeat Simple_repeat 2 39 0 1021 190 23 0 chr5 51232849 51233023 -148397127 - MER45A DNA AcHobo 0 178 1 227 297 69 40 chr5 51233027 51233128 -148397022 + L2 LINE L2 3168 3271 -1 4507 157 23 7 chr5 51235465 51236198 -148393952 + L1PB4 LINE L1 5409 6153 -3 21 0 0 0 chr5 51236200 51236221 -148393929 + AT_rich Low_complexity Low_complexity 1 21 0 369 192 25 0 chr5 51236226 51236346 -148393804 + (TA)n Simple_repeat Simple_repeat 1 123 0 303 321 73 0 chr5 51236462 51236571 -148393579 - LTR16A1 LTR ERVL -2 455 339 722 282 146 10 chr5 51236654 51236955 -148393195 - LTR16A1 LTR ERVL -115 342 1 3185 339 67 43 chr5 51237140 51240698 -148389452 - ERVL LTR ERVL -439 5325 1606 744 298 17 4 chr5 51240838 51241073 -148389077 - ERVL LTR ERVL -3667 1329 1092 380 248 0 88 chr5 51241087 51241205 -148388945 + MER58A DNA MER1_type 2 109 0 * 391 200 0 0 chr5 51241205 51241264 -148388886 + MER58A DNA MER1_type 161 219 -5 1309 340 61 24 chr5 51241277 51242302 -148387848 - ERVL LTR ERVL -3909 1087 3 887 289 114 27 chr5 51242306 51242711 -148387439 - LTR16A1 LTR ERVL -17 440 1 200 33 0 33 chr5 51243213 51243243 -148386907 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2125 106 0 70 chr5 51244560 51244891 -148385259 + AluSq SINE Alu 1 308 -5 312 232 0 0 chr5 51245234 51245290 -148384860 + MER5A DNA MER1_type 16 71 -118 43861 46 1 1 chr5 51245297 51251453 -148378697 + L1PA3 LINE L1 3 6152 -3 215 0 0 62 chr5 51251456 51251488 -148378662 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 199 240 42 52 chr5 51251659 51251755 -148378395 - L3 LINE CR1 -579 998 904 301 96 96 0 chr5 51252161 51252213 -148377937 + MER63 DNA MER1_type 1 57 -1004 2536 187 56 18 chr5 51252220 51252771 -148377379 + MER63 DNA MER1_type 471 1042 -19 657 234 0 0 chr5 51253452 51253580 -148376570 + MER3 DNA MER1_type 1 128 -81 209 56 0 28 chr5 51253582 51253618 -148376532 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 5303 260 113 40 chr5 51256601 51256991 -148373159 - L1MEc LINE L1 -437 5798 5438 9467 34 0 2 chr5 51256991 51258906 -148371244 - L1PA2 LINE L1 -1 6154 4242 5303 260 113 40 chr5 51258906 51262297 -148367853 - L1MEc LINE L1 -797 5438 1621 429 284 111 35 chr5 51262356 51262715 -148367435 - L1MEc LINE L1 -4835 1469 1156 859 111 22 1 chr5 51262787 51262931 -148367219 - THE1B LTR MaLR 0 364 222 11782 89 12 0 chr5 51262932 51264483 -148365667 - THE1B-int LTR MaLR -6 1574 6 2118 136 25 35 chr5 51264507 51264875 -148365275 - THE1B LTR MaLR 0 364 1 621 278 104 28 chr5 51264875 51265299 -148364851 - L1MEc LINE L1 -5365 1031 576 1934 130 0 7 chr5 51265302 51265624 -148364526 - AluSx SINE Alu 0 320 1 1269 333 32 24 chr5 51265639 51266254 -148363896 - HERV16 LTR ERVL -4340 656 37 425 304 145 43 chr5 51266312 51266588 -148363562 - LTR16A LTR ERVL -34 416 113 276 202 119 92 chr5 51266801 51266910 -148363240 + LTR50 LTR ERVL 1 112 -683 271 283 101 10 chr5 51266982 51267023 -148363127 + LTR50 LTR ERVL 503 539 -256 2192 128 3 0 chr5 51267023 51267327 -148362823 - AluSx SINE Alu -7 305 1 271 283 101 10 chr5 51267327 51267384 -148362766 + LTR50 LTR ERVL 539 610 -185 4493 149 28 37 chr5 51267384 51268218 -148361932 + LTR1B LTR ERV1 1 826 0 372 279 128 10 chr5 51269896 51270082 -148360068 - MLT1H LTR MaLR -7 542 336 277 275 25 12 chr5 51270401 51270481 -148359669 + L2 LINE L2 3188 3268 -4 226 371 34 65 chr5 51271011 51271290 -148358860 + L2 LINE L2 2958 3311 -2 191 291 47 0 chr5 51271646 51271732 -148358418 - MIR SINE MIR -13 249 160 754 226 70 0 chr5 51272345 51272544 -148357606 - MER45B DNA AcHobo 0 1040 828 2401 229 91 87 chr5 51272548 51272828 -148357322 - Charlie2a DNA MER1_type -851 2011 1734 1387 188 79 20 chr5 51272828 51273120 -148357030 - AluJb SINE Alu 0 312 4 2401 229 91 87 chr5 51273120 51274191 -148355959 - Charlie2a DNA MER1_type -1128 1734 654 411 281 22 37 chr5 51274195 51274237 -148355913 + L2 LINE L2 3180 3221 -92 2092 142 0 0 chr5 51274237 51274548 -148355602 - AluSx SINE Alu -1 311 1 411 281 22 37 chr5 51274548 51274640 -148355510 + L2 LINE L2 3221 3312 -1 32 26 0 0 chr5 51274713 51274752 -148355398 + AT_rich Low_complexity Low_complexity 1 39 0 476 269 55 51 chr5 51274781 51275034 -148355116 - L1MC/D LINE L1 -605 5561 5332 5335 85 3 12 chr5 51275617 51276372 -148353778 - L1PA13 LINE L1 -4 6159 5412 401 311 80 23 chr5 51276584 51277123 -148353027 + L1M4 LINE L1 2157 2735 -3411 25 0 0 0 chr5 51277186 51277211 -148352939 + AT_rich Low_complexity Low_complexity 1 25 0 507 209 58 58 chr5 51278352 51278524 -148351626 - MLT1C LTR MaLR -5 462 291 1785 222 54 22 chr5 51278588 51279034 -148351116 - MLT1C LTR MaLR -7 460 1 228 207 52 17 chr5 51280837 51280895 -148349255 - L2 LINE L2 -2 3311 3252 180 111 0 0 chr5 51280911 51280938 -148349212 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 1359 229 69 16 chr5 51280946 51281322 -148348828 + MSTD LTR MaLR 1 396 0 414 0 0 0 chr5 51281348 51281394 -148348756 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 311 328 34 17 chr5 51281893 51282012 -148348138 + L2 LINE L2 3188 3308 -5 242 308 159 0 chr5 51282161 51282268 -148347882 - L2 LINE L2 0 3272 3149 791 192 25 0 chr5 51282310 51282481 -148347669 + MER33 DNA MER1_type 1 159 -102 26772 82 16 9 chr5 51282481 51287062 -148343088 - L1PA7 LINE L1 -9 6145 1548 514 112 5 214 chr5 51287064 51287279 -148342871 + MER33 DNA MER1_type 152 321 -3 197 344 42 21 chr5 51288061 51288157 -148341993 - MIR SINE MIR -15 247 150 584 322 72 13 chr5 51288387 51288623 -148341527 - MIR SINE MIR -11 251 2 366 297 119 0 chr5 51289814 51289932 -148340218 - MIR SINE MIR -14 248 117 2482 233 59 25 chr5 51292537 51293314 -148336836 + L1MEc LINE L1 1556 2365 -3850 1797 176 0 7 chr5 51293314 51293609 -148336541 + AluSx SINE Alu 1 293 -19 2482 233 59 25 chr5 51293609 51293913 -148336237 + L1MEc LINE L1 2365 2657 -3558 260 343 0 0 chr5 51294022 51294092 -148336058 - MER91B DNA MER1_type -118 72 3 369 0 0 0 chr5 51294203 51294244 -148335906 + (CA)n Simple_repeat Simple_repeat 2 42 0 327 263 12 0 chr5 51294443 51294523 -148335627 + LTR16A LTR ERVL 364 444 -6 28 0 0 0 chr5 51294995 51295023 -148335127 + AT_rich Low_complexity Low_complexity 1 28 0 435 336 50 25 chr5 51295023 51295261 -148334889 - L2 LINE L2 -1370 1944 1701 2628 189 102 12 chr5 51295449 51296096 -148334054 - MER39 LTR ERV1 0 707 3 491 309 62 16 chr5 51296323 51296517 -148333633 + MIR SINE MIR 46 248 -14 619 255 48 38 chr5 51298002 51298316 -148331834 - L1MC4 LINE L1 -108 7934 7618 23 0 0 0 chr5 51298917 51298940 -148331210 + AT_rich Low_complexity Low_complexity 1 23 0 450 316 25 13 chr5 51299160 51299318 -148330832 - MIR3 SINE MIR -10 198 39 399 329 84 7 chr5 51300266 51300421 -148329729 + MIR SINE MIR 28 194 -68 226 344 42 21 chr5 51301437 51301533 -148328617 + MIR SINE MIR 31 128 -80 438 278 52 9 chr5 51302262 51302377 -148327773 - L2 LINE L2 -4 3268 3149 189 356 25 50 chr5 51302400 51302560 -148327590 + MER5A DNA MER1_type 34 189 0 307 323 57 60 chr5 51305103 51305595 -148324555 + L2 LINE L2 2481 3036 -236 429 298 65 0 chr5 51305725 51305849 -148324301 - L2 LINE L2 -4 3268 3137 278 368 78 12 chr5 51305873 51306039 -148324111 + L2 LINE L2 3094 3270 -2 718 325 95 0 chr5 51306116 51306411 -148323739 - L3 LINE CR1 -75 1502 1180 193 294 103 0 chr5 51308765 51308833 -148321317 + L3 LINE CR1 1503 1577 0 189 74 0 0 chr5 51309192 51309219 -148320931 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 609 313 77 17 chr5 51312528 51312931 -148317219 + LTR16A LTR ERVL 18 444 -6 1162 208 0 0 chr5 51313071 51313292 -148316858 + MLT1A1 LTR MaLR 145 365 0 1469 178 57 23 chr5 51313321 51313670 -148316480 - L1PA16 LINE L1 0 6166 5806 2452 205 98 10 chr5 51313671 51314285 -148315865 - MER45B DNA AcHobo -310 730 63 806 280 45 73 chr5 51314325 51314793 -148315357 + HERV16 LTR ERVL 165 619 -4377 756 229 33 56 chr5 51314794 51315008 -148315142 - MER58A DNA MER1_type -3 221 13 213 65 0 0 chr5 51315212 51315243 -148314907 + (A)n Simple_repeat Simple_repeat 1 31 0 241 336 39 19 chr5 51315639 51315743 -148314407 - L2 LINE L2 -40 3273 3168 435 282 77 95 chr5 51315954 51316447 -148313703 + MLT1J LTR MaLR 26 509 -2 539 291 23 11 chr5 51318099 51318274 -148311876 + MIR SINE MIR 44 220 -42 623 273 39 23 chr5 51318941 51319348 -148310802 + LTR16A LTR ERVL 1 444 -6 214 281 110 37 chr5 51320026 51320055 -148310095 - MIR3 SINE MIR -62 146 121 2363 113 11 8 chr5 51320055 51320409 -148309741 + THE1A LTR MaLR 1 355 0 214 281 110 37 chr5 51320409 51320549 -148309601 - MIR3 SINE MIR -87 121 5 3384 71 32 0 chr5 51321521 51321959 -148308191 + MLT2A2 LTR ERVL 1 452 -1 658 214 57 25 chr5 51322516 51322675 -148307475 - MIR SINE MIR -14 248 85 1243 157 89 40 chr5 51322721 51322849 -148307301 + AluJo SINE Alu 1 121 -191 189 0 0 0 chr5 51322849 51322870 -148307280 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1243 157 89 40 chr5 51322870 51322989 -148307161 + AluJo SINE Alu 121 260 -52 296 303 83 0 chr5 51323333 51323465 -148306685 - MLT1L LTR MaLR 0 615 473 2203 103 6 26 chr5 51323746 51324058 -148306092 + AluSg SINE Alu 1 306 -4 813 298 60 45 chr5 51324623 51325153 -148304997 + MLT1H LTR MaLR 12 549 0 223 309 0 37 chr5 51325345 51325426 -148304724 + GA-rich Low_complexity Low_complexity 3 80 0 352 295 48 48 chr5 51326382 51326548 -148303602 - MER5B DNA MER1_type 0 178 13 198 361 35 35 chr5 51327067 51327211 -148302939 - L3 LINE CR1 -15 1562 1419 424 219 63 107 chr5 51328780 51329050 -148301100 + LTR16A1 LTR ERVL 199 456 -1 212 284 24 94 chr5 51329150 51329178 -148300972 - MIR SINE MIR -142 120 92 1846 143 60 30 chr5 51329178 51329542 -148300608 - THE1C LTR MaLR 0 375 1 212 284 24 94 chr5 51329542 51329640 -148300510 - MIR SINE MIR -170 92 3 1860 171 14 20 chr5 51330463 51330819 -148299331 - MLT1A1 LTR MaLR -2 363 10 638 239 66 36 chr5 51330937 51331167 -148298983 + MIR SINE MIR 25 258 -4 2268 118 0 3 chr5 51331445 51331751 -148298399 - AluSq SINE Alu -8 305 1 299 271 47 0 chr5 51331885 51331970 -148298180 - L2 LINE L2 0 3272 3184 7749 23 0 0 chr5 51333806 51334808 -148295342 + L1PA2 LINE L1 5153 6154 -1 1466 214 42 11 chr5 51334820 51335198 -148294952 + L1ME LINE L1 5340 5729 -437 209 56 0 28 chr5 51338181 51338217 -148291933 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 614 234 0 0 chr5 51338219 51338347 -148291803 - MER3 DNA MER1_type -81 128 1 2267 188 65 11 chr5 51339035 51339573 -148290577 - MER63 DNA MER1_type -24 1037 471 286 82 61 0 chr5 51339580 51339629 -148290521 - MER63 DNA MER1_type -1004 57 6 193 240 42 52 chr5 51340039 51340135 -148290015 + L3 LINE CR1 904 998 -579 215 0 0 62 chr5 51340306 51340338 -148289812 + (TTTTTA)n Simple_repeat Simple_repeat 2 31 0 9413 34 2 1 chr5 51340341 51342251 -148287899 - L1PA3 LINE L1 -3 6152 4242 5183 253 117 31 chr5 51342252 51345643 -148284507 - L1MEc LINE L1 -797 5418 1621 429 284 111 35 chr5 51345702 51346061 -148284089 - L1MEc LINE L1 -4835 1469 1156 859 111 22 1 chr5 51346133 51346277 -148283873 - THE1B LTR MaLR 0 364 222 11805 88 12 0 chr5 51346278 51347829 -148282321 - THE1B-int LTR MaLR -6 1574 6 2092 139 25 35 chr5 51347853 51348221 -148281929 - THE1B LTR MaLR 0 364 1 621 278 104 28 chr5 51348221 51348645 -148281505 - L1MEc LINE L1 -5365 1031 576 1934 130 0 7 chr5 51348648 51348970 -148281180 - AluSx SINE Alu 0 320 1 1269 333 32 24 chr5 51348985 51349600 -148280550 - HERV16 LTR ERVL -4340 656 37 604 310 86 43 chr5 51349658 51350005 -148280145 - LTR16A LTR ERVL -34 416 58 276 202 119 92 chr5 51350164 51350273 -148279877 + LTR50 LTR ERVL 1 112 -683 271 283 101 10 chr5 51350345 51350386 -148279764 + LTR50 LTR ERVL 503 539 -256 2192 128 3 0 chr5 51350386 51350690 -148279460 - AluSx SINE Alu -7 305 1 271 283 101 10 chr5 51350690 51350747 -148279403 + LTR50 LTR ERVL 539 610 -185 4474 150 28 37 chr5 51350747 51351581 -148278569 + LTR1B LTR ERV1 1 826 0 372 279 127 11 chr5 51353259 51353445 -148276705 - MLT1H LTR MaLR -7 542 311 277 275 25 12 chr5 51353764 51353844 -148276306 + L2 LINE L2 3188 3268 -4 226 371 34 65 chr5 51354373 51354652 -148275498 + L2 LINE L2 2958 3311 -2 191 291 47 0 chr5 51355008 51355094 -148275056 - MIR SINE MIR -13 249 160 754 226 70 0 chr5 51355707 51355906 -148274244 - MER45B DNA AcHobo 0 1040 828 2439 228 91 87 chr5 51355910 51356190 -148273960 - Charlie2a DNA MER1_type -851 2011 1734 1387 188 79 20 chr5 51356190 51356482 -148273668 - AluJb SINE Alu 0 312 4 2439 228 91 87 chr5 51356482 51357553 -148272597 - Charlie2a DNA MER1_type -1128 1734 654 411 281 22 37 chr5 51357557 51357599 -148272551 + L2 LINE L2 3180 3221 -92 2092 142 0 0 chr5 51357599 51357910 -148272240 - AluSx SINE Alu -1 311 1 411 281 22 37 chr5 51357910 51358002 -148272148 + L2 LINE L2 3221 3312 -1 32 26 0 0 chr5 51358075 51358114 -148272036 + AT_rich Low_complexity Low_complexity 1 39 0 476 269 55 51 chr5 51358143 51358396 -148271754 - L1MC/D LINE L1 -605 5561 5332 5328 85 3 12 chr5 51358979 51359734 -148270416 - L1PA13 LINE L1 -4 6159 5412 401 311 80 23 chr5 51359946 51360485 -148269665 + L1M4 LINE L1 2157 2735 -3411 25 0 0 0 chr5 51360548 51360573 -148269577 + AT_rich Low_complexity Low_complexity 1 25 0 507 209 58 58 chr5 51361714 51361886 -148268264 - MLT1C LTR MaLR -5 462 291 1803 220 54 22 chr5 51361950 51362396 -148267754 - MLT1C LTR MaLR -7 460 1 277 250 0 37 chr5 51362782 51362890 -148267260 + A-rich Low_complexity Low_complexity 1 104 0 233 29 29 0 chr5 51363099 51363133 -148267017 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 7334 39 0 0 chr5 51363133 51364013 -148266137 - L1PA3 LINE L1 -13 6142 5263 682 310 121 50 chr5 51464645 51465148 -148165002 - L2 LINE L2 -848 2466 1928 1752 174 22 0 chr5 51466912 51467188 -148162962 + AluJb SINE Alu 1 282 -30 1793 209 41 10 chr5 51467533 51467950 -148162200 + MER63B DNA MER1_type 4 433 -3 6850 52 1 36 chr5 51468518 51469502 -148160648 + L1PA5 LINE L1 5194 6145 -9 568 99 25 0 chr5 51469699 51469780 -148160370 + AluJo SINE Alu 53 135 -177 251 306 72 22 chr5 51469785 51469965 -148160185 - L1MEc LINE L1 -4552 2273 2085 255 309 40 13 chr5 51469983 51470132 -148160018 - L1PA15-16 LINE L1 -4272 2577 2425 1317 195 37 26 chr5 51470150 51470422 -148159728 - AluJb SINE Alu -15 297 23 234 309 16 32 chr5 51470498 51470621 -148159529 - L1MEc LINE L1 -4887 1655 1535 554 221 24 9 chr5 51470787 51470925 -148159225 - MLT1C LTR MaLR -4 463 248 654 257 29 101 chr5 51471748 51472094 -148158056 - MER46C DNA MER2_type -17 321 1 302 353 179 0 chr5 51473043 51473199 -148156951 - MER91A DNA MER1_type -10 186 3 392 249 138 21 chr5 51473410 51473599 -148156551 + LTR33 LTR ERVL 1 211 -310 195 162 0 0 chr5 51475117 51475154 -148154996 + (TA)n Simple_repeat Simple_repeat 2 38 0 2178 99 14 0 chr5 51475185 51475479 -148154671 + AluSp SINE Alu 1 298 -15 22 0 0 0 chr5 51475873 51475895 -148154255 + AT_rich Low_complexity Low_complexity 1 22 0 460 280 8 8 chr5 51476918 51477043 -148153107 - MIR SINE MIR -25 237 113 509 318 41 23 chr5 51477814 51478034 -148152116 + MIR SINE MIR 2 225 -37 29 28 0 0 chr5 51479095 51479131 -148151019 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr5 51479148 51479169 -148150981 + AT_rich Low_complexity Low_complexity 1 21 0 646 293 91 47 chr5 51479232 51479529 -148150621 + MLT1J2 LTR MaLR 3 312 -138 321 289 167 13 chr5 51479565 51479653 -148150497 - L2 LINE L2 -540 2774 2701 1667 255 99 26 chr5 51479653 51480158 -148149992 + MLT1F LTR MaLR 1 542 0 321 289 167 13 chr5 51480158 51480225 -148149925 - L2 LINE L2 -613 2701 2595 552 205 200 30 chr5 51480440 51480640 -148149510 - MLT1C LTR MaLR -271 234 1 21 36 0 0 chr5 51482031 51482059 -148148091 + AT_rich Low_complexity Low_complexity 1 28 0 358 349 0 24 chr5 51482510 51482636 -148147514 + MER5B DNA MER1_type 56 178 0 239 308 30 11 chr5 51482644 51482754 -148147396 - MIR SINE MIR -67 141 30 310 226 45 68 chr5 51482826 51482959 -148147191 + MER103 DNA DNA 34 163 -3 244 290 30 60 chr5 51483427 51483527 -148146623 - L2 LINE L2 -4 3309 3213 991 218 75 4 chr5 51483722 51484029 -148146121 + MER33 DNA MER1_type 1 300 -24 186 208 28 97 chr5 51484061 51484133 -148146017 - MIR SINE MIR -40 222 156 226 260 0 39 chr5 51484978 51485055 -148145095 + GA-rich Low_complexity Low_complexity 4 77 0 461 125 0 12 chr5 51486504 51486584 -148143566 + (TG)n Simple_repeat Simple_repeat 2 80 0 238 229 52 83 chr5 51486670 51486766 -148143384 + MIR SINE MIR 108 200 -62 * 533 286 60 21 chr5 51486764 51486998 -148143152 + MIR SINE MIR 5 247 -15 186 333 0 0 chr5 51487046 51487100 -148143050 + L2 LINE L2 3251 3304 -9 30 69 0 0 chr5 51487844 51487902 -148142248 + AT_rich Low_complexity Low_complexity 1 58 0 904 232 58 4 chr5 51488624 51488865 -148141285 - MER112 DNA MER1_type -6 254 1 961 185 40 0 chr5 51489651 51489851 -148140299 + MER3 DNA MER1_type 2 209 0 211 294 39 0 chr5 51490005 51490056 -148140094 + MIR SINE MIR 210 262 0 261 200 0 0 chr5 51490185 51490240 -148139910 - MER112 DNA MER1_type -7 253 199 285 279 29 0 chr5 51490362 51490430 -148139720 + MIR3 SINE MIR 90 159 -49 1077 196 91 67 chr5 51490516 51490858 -148139292 + MLT1A1 LTR MaLR 4 353 -12 256 333 10 0 chr5 51490847 51490949 -148139201 - Charlie8 DNA MER1_type -1027 1390 188 * 1890 178 0 0 chr5 51491105 51491409 -148138741 + AluJb SINE Alu 7 310 -2 234 300 20 0 chr5 51491410 51491460 -148138690 - MER58 DNA MER1_type -2365 55 5 630 281 88 62 chr5 51491792 51492290 -148137860 + MLT1J LTR MaLR 1 511 0 452 319 58 0 chr5 51493963 51494101 -148136049 - MER91A DNA MER1_type -44 152 7 193 289 219 26 chr5 51494090 51494204 -148135946 - MIR SINE MIR -37 225 90 * 4141 109 7 2 chr5 51494456 51495050 -148135100 - MER4A LTR ERV1 -3 597 1 386 293 111 58 chr5 51495812 51496037 -148134113 - MIR SINE MIR -6 256 20 236 376 74 26 chr5 51496297 51496486 -148133664 + MIR3 SINE MIR 11 208 0 1962 163 0 0 chr5 51497313 51497608 -148132542 - AluSx SINE Alu -17 295 1 521 244 34 28 chr5 51498113 51498289 -148131861 + L1MC/D LINE L1 5635 5811 -1997 1046 115 37 21 chr5 51498297 51498488 -148131662 - L1PA14 LINE L1 0 6161 5968 275 275 176 0 chr5 51499507 51499598 -148130552 - L2 LINE L2 -15 3257 3151 24 32 0 0 chr5 51499628 51499659 -148130491 + AT_rich Low_complexity Low_complexity 1 31 0 192 317 0 0 chr5 51499957 51500017 -148130133 - L3b LINE CR1 -196 1387 1328 468 109 0 206 chr5 51500209 51500384 -148129766 + MER53 DNA DNA 39 177 -12 400 195 0 0 chr5 51500319 51500406 -148129744 - MER53 DNA DNA -102 87 1 * 270 116 0 0 chr5 51501246 51501289 -148128861 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 217 350 39 0 chr5 51501292 51501395 -148128755 - L2 LINE L2 -15 3298 3192 1247 191 23 0 chr5 51501439 51501701 -148128449 + L1MCa LINE L1 29 296 -6130 950 274 16 40 chr5 51501708 51502081 -148128069 - L1M4 LINE L1 -774 5372 5009 910 243 140 37 chr5 51503378 51503699 -148126451 + MLT1E3 LTR MaLR 200 584 -40 396 55 0 0 chr5 51503798 51503853 -148126297 + (TG)n Simple_repeat Simple_repeat 2 56 0 26 0 0 0 chr5 51504165 51504191 -148125959 + AT_rich Low_complexity Low_complexity 1 26 0 23909 53 6 1 chr5 51504520 51506444 -148123706 - L1P LINE L1 -2963 3183 1237 2096 60 53 11 chr5 51506444 51506726 -148123424 - AluY SINE Alu -17 294 1 23909 53 6 1 chr5 51506726 51507962 -148122188 - L1P LINE L1 -4909 1237 8 2550 56 0 0 chr5 51508158 51508461 -148121689 - AluY SINE Alu -8 303 1 496 318 119 46 chr5 51508662 51508964 -148121186 - L3 LINE CR1 -4 1573 1250 407 293 0 0 chr5 51509713 51509812 -148120338 + MIR SINE MIR 7 105 -157 22 0 0 0 chr5 51509812 51509834 -148120316 + AT_rich Low_complexity Low_complexity 1 22 0 1569 179 25 6 chr5 51509842 51510195 -148119955 - L1MA5 LINE L1 -5 6295 5936 1071 192 55 4 chr5 51510195 51510466 -148119684 + L1 LINE L1 4940 5224 -922 678 242 11 34 chr5 51510466 51510644 -148119506 + MIR SINE MIR 89 262 0 4311 120 3 0 chr5 51510679 51511312 -148118838 + MER41B LTR ERV1 1 635 0 16174 37 1 3 chr5 51512630 51515366 -148114784 - L1PA4 LINE L1 -3 6152 3422 604 298 101 0 chr5 51517673 51517931 -148112219 + MER69 DNA AcHobo 48 331 -2195 784 187 24 0 chr5 51518194 51518360 -148111790 - MER96B DNA MER1_type? -238 179 10 467 316 142 22 chr5 51518361 51518678 -148111472 + L3 LINE CR1 617 971 -606 418 284 30 30 chr5 51518700 51518897 -148111253 + LTR33A LTR ERVL 8 204 -319 609 220 161 14 chr5 51518923 51519141 -148111009 + LTR33A LTR ERVL 272 521 -2 421 343 43 14 chr5 51519243 51519453 -148110697 + MIR SINE MIR 13 228 -34 294 329 206 4 chr5 51519484 51519727 -148110423 + L3 LINE CR1 1199 1490 -87 494 305 59 27 chr5 51519762 51519949 -148110201 - MIR SINE MIR -4 258 66 238 228 119 0 chr5 51520098 51520199 -148109951 - L1ME4a LINE L1 0 6121 6009 192 269 30 15 chr5 51520584 51520651 -148109499 + L2 LINE L2 3204 3271 -42 2427 81 0 0 chr5 51520887 51521195 -148108955 - AluY SINE Alu -3 308 1 502 265 71 29 chr5 51521244 51521414 -148108736 + MER5A DNA MER1_type 13 189 0 788 222 22 5 chr5 51521969 51522154 -148107996 - MER5A DNA MER1_type 0 189 2 557 298 126 64 chr5 51522333 51522739 -148107411 - L3 LINE CR1 -326 1251 821 613 167 48 106 chr5 51522763 51522990 -148107160 + L1MD2 LINE L1 6146 6359 0 625 262 93 6 chr5 51523093 51523276 -148106874 + MIR SINE MIR 56 254 -8 298 275 37 18 chr5 51523695 51523804 -148106346 - MLT2E LTR ERVL -486 142 32 196 333 28 0 chr5 51525539 51525611 -148104539 + MIR SINE MIR 119 192 -70 312 215 50 25 chr5 51526246 51526367 -148103783 + A-rich Low_complexity Low_complexity 5 128 0 2186 164 21 2 chr5 51527000 51527428 -148102722 + L1MA9 LINE L1 5872 6307 -5 3327 139 83 2 chr5 51527784 51528387 -148101763 - MER51A LTR ERV1 0 640 1 320 363 48 18 chr5 51528436 51528604 -148101546 + MIR SINE MIR 1 173 -89 276 275 55 18 chr5 51529458 51529567 -148100583 - MLT1J2 LTR MaLR -337 113 1 201 382 48 75 chr5 51529623 51529809 -148100341 - L2 LINE L2 -88 3184 3004 462 114 0 0 chr5 51529854 51529924 -148100226 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 1952 255 77 66 chr5 51530959 51531245 -148098905 + L1MEc LINE L1 606 887 -5509 2741 10 0 0 chr5 51531245 51531543 -148098607 + AluYb8 SINE Alu 21 318 0 1952 255 77 66 chr5 51531543 51532457 -148097693 + L1MEc LINE L1 887 1820 -4576 198 167 0 0 chr5 51532735 51532771 -148097379 + GA-rich Low_complexity Low_complexity 1 36 0 352 269 115 23 chr5 51533042 51533172 -148096978 + MER5A DNA MER1_type 38 179 -10 339 271 75 27 chr5 51534654 51534788 -148095362 + MIR SINE MIR 18 153 -62 693 288 77 81 chr5 51534806 51535275 -148094875 - L2 LINE L2 -5 3308 2842 787 146 98 12 chr5 51535391 51535555 -148094595 + MER41B-int LTR ERV1 1585 1762 -4184 710 132 0 8 chr5 51535556 51535677 -148094473 + MER41B-int LTR ERV1 1988 2107 -4156 * 942 117 14 0 chr5 51535673 51535818 -148094332 + MER41B-int LTR ERV1 2781 2927 -4610 1718 89 31 12 chr5 51535820 51536077 -148094073 + MER41B-int LTR ERV1 2587 2848 -3098 * 11609 114 21 10 chr5 51536069 51538465 -148091685 + MER41B-int LTR ERV1 2738 5946 0 3521 108 108 2 chr5 51538465 51539039 -148091111 + MER41B LTR ERV1 1 635 0 254 319 17 35 chr5 51539954 51540070 -148090080 - MIR SINE MIR -148 114 1 28704 39 35 2 chr5 51540448 51544193 -148085957 + L1P LINE L1 1 3869 -2277 455 304 12 0 chr5 51545053 51545214 -148084936 + Charlie8 DNA MER1_type 60 222 -2195 2164 127 45 101 chr5 51545546 51546052 -148084098 + LTR1 LTR ERV1 49 526 -259 229 231 0 0 chr5 51546052 51546104 -148084046 + LTR30 LTR ERV1 1 52 -670 1794 100 194 168 chr5 51546104 51546672 -148083478 + LTR12 LTR ERV1 58 581 -133 1225 173 60 8 chr5 51546672 51546921 -148083229 + LTR1 LTR ERV1 523 784 -1 23 54 0 0 chr5 51547892 51547929 -148082221 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr5 51548061 51548092 -148082058 + AT_rich Low_complexity Low_complexity 1 31 0 2092 152 0 0 chr5 51548292 51548595 -148081555 - AluSx SINE Alu -9 303 1 388 235 23 15 chr5 51548797 51548929 -148081221 + MER103 DNA DNA 20 152 -14 905 196 88 39 chr5 51549153 51549514 -148080636 - MSTC LTR MaLR 0 428 1 234 114 0 0 chr5 51549930 51549965 -148080185 - U2 snRNA snRNA -153 35 1 1153 201 74 56 chr5 51550397 51550681 -148079469 + AluJo SINE Alu 1 289 -13 32 43 0 0 chr5 51551948 51551994 -148078156 + AT_rich Low_complexity Low_complexity 1 46 0 387 0 0 0 chr5 51552629 51552672 -148077478 + (TG)n Simple_repeat Simple_repeat 2 44 0 354 240 103 64 chr5 51554032 51554238 -148075912 + MIR SINE MIR 16 223 -39 279 0 0 0 chr5 51554899 51554930 -148075220 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 213 94 0 0 chr5 51555265 51555297 -148074853 + (CA)n Simple_repeat Simple_repeat 2 33 0 14190 132 19 16 chr5 51555298 51555893 -148074257 + Tigger1 DNA MER2_type 26 618 -1800 2010 146 3 3 chr5 51555893 51556194 -148073956 + AluJb SINE Alu 1 301 -11 14190 132 19 16 chr5 51556194 51557983 -148072167 + Tigger1 DNA MER2_type 618 2416 -2 706 191 62 136 chr5 51557991 51558368 -148071782 - MLT1A1 LTR MaLR -11 421 5 387 259 122 20 chr5 51558581 51558728 -148071422 + MSTD LTR MaLR 14 175 -221 315 281 97 54 chr5 51559154 51559339 -148070811 + MIR SINE MIR 17 209 -53 225 300 43 0 chr5 51564938 51565008 -148065142 - LTR58 LTR ERV1 -569 110 38 203 319 25 50 chr5 51565550 51565669 -148064481 + MIR SINE MIR 18 133 -75 188 235 0 39 chr5 51565716 51565767 -148064383 + L2 LINE L2 3265 3313 0 816 139 0 0 chr5 51566108 51566223 -148063927 - FLAM_C SINE Alu -16 127 13 446 282 146 82 chr5 51567073 51567353 -148062797 - L2 LINE L2 -10 3262 2965 271 301 84 28 chr5 51567398 51567541 -148062609 - L2 LINE L2 -574 2740 2590 298 264 123 0 chr5 51568103 51568209 -148061941 + MIR SINE MIR 11 129 -133 272 364 14 0 chr5 51569549 51569689 -148060461 - HAL1b LINE L1 -775 573 432 3824 154 92 0 chr5 51570326 51570987 -148059163 + MER72 LTR ERV1 1 722 0 189 107 0 0 chr5 51571055 51571083 -148059067 + (TTC)n Simple_repeat Simple_repeat 3 30 0 182 243 0 27 chr5 51573180 51573217 -148056933 + MIR SINE MIR 20 55 -207 527 294 10 29 chr5 51573499 51573703 -148056447 - MLT1H LTR MaLR -315 234 35 271 255 208 7 chr5 51573753 51573902 -148056248 + MIR SINE MIR 81 259 -3 1354 117 0 6 chr5 51575011 51575191 -148054959 - AluSx SINE Alu -133 179 1 623 269 99 57 chr5 51575918 51576108 -148054042 - L1M4 LINE L1 -1555 4591 4411 1528 183 3 33 chr5 51576108 51576408 -148053742 + AluJb SINE Alu 1 291 -21 623 269 99 57 chr5 51576408 51576589 -148053561 - L1M4 LINE L1 -1735 4411 4204 536 278 62 70 chr5 51576684 51577040 -148053110 + MLT1J LTR MaLR 104 456 -55 234 0 0 0 chr5 51577121 51577147 -148053003 + (T)n Simple_repeat Simple_repeat 1 26 0 7458 11 2 2 chr5 51577195 51578429 -148051721 - L1HS LINE L1 0 6155 4921 900 172 44 11 chr5 51578540 51578720 -148051430 - MER20 DNA MER1_type -33 186 1 198 0 0 0 chr5 51579230 51579252 -148050898 + (TA)n Simple_repeat Simple_repeat 2 23 0 28 71 0 0 chr5 51579299 51579355 -148050795 + AT_rich Low_complexity Low_complexity 1 56 0 313 333 46 35 chr5 51579693 51579867 -148050283 + MIR SINE MIR 2 177 -85 2322 99 3 0 chr5 51579888 51580200 -148049950 + AluSp SINE Alu 1 313 0 976 201 86 32 chr5 51580450 51580728 -148049422 - MLT1A1 LTR MaLR -68 297 5 704 188 0 0 chr5 51581120 51581237 -148048913 + FLAM_C SINE Alu 2 118 -15 238 204 0 0 chr5 51581441 51581495 -148048655 + T-rich Low_complexity Low_complexity 1 54 0 417 86 0 0 chr5 51582359 51582417 -148047733 + (TAG)n Simple_repeat Simple_repeat 2 59 0 22 0 0 0 chr5 51582607 51582629 -148047521 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 51582655 51582685 -148047465 + AT_rich Low_complexity Low_complexity 1 30 0 844 161 0 0 chr5 51583955 51584085 -148046065 + FLAM_C SINE Alu 1 130 -3 1967 65 40 22 chr5 51584469 51584789 -148045361 - AluY SINE Alu 0 325 1 346 257 10 30 chr5 51584840 51584941 -148045209 + MIR SINE MIR 53 151 -111 314 336 28 19 chr5 51585203 51585310 -148044840 + MIR SINE MIR 2 109 -153 343 242 172 0 chr5 51585323 51585422 -148044728 + L2 LINE L2 3195 3310 -3 506 325 55 4 chr5 51585853 51586090 -148044060 + LTR33 LTR ERVL 257 505 -16 234 0 0 0 chr5 51586905 51586931 -148043219 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 15033 31 3 0 chr5 51586931 51589491 -148040659 - L1PA3 LINE L1 -10 6145 3581 776 40 10 0 chr5 51589491 51589592 -148040558 - L1PA3 LINE L1 -4479 1667 1566 25539 46 39 2 chr5 51589599 51593027 -148037123 - L1P LINE L1 -2581 3565 13 382 386 80 25 chr5 51593419 51594022 -148036128 - L2 LINE L2 -532 2782 2147 195 288 0 96 chr5 51594156 51594229 -148035921 - L2 LINE L2 -2131 1183 1118 21 0 0 0 chr5 51594276 51594297 -148035853 + AT_rich Low_complexity Low_complexity 1 21 0 4506 204 29 8 chr5 51594356 51595550 -148034600 + L1 LINE L1 4152 5370 -776 1416 191 23 57 chr5 51596120 51596507 -148033643 - MLT1B LTR MaLR -6 384 11 2425 121 11 3 chr5 51597018 51597390 -148032760 - THE1C LTR MaLR 0 375 1 23 54 0 0 chr5 51597591 51597628 -148032522 + AT_rich Low_complexity Low_complexity 1 37 0 217 332 258 12 chr5 51597660 51597994 -148032156 + L2 LINE L2 2550 2965 -349 1201 241 38 43 chr5 51598211 51598610 -148031540 - MLT2C1 LTR ERVL 0 397 1 673 298 48 29 chr5 51598731 51599043 -148031107 + L2 LINE L2 2996 3313 0 1907 148 3 17 chr5 51600342 51600640 -148029510 + AluJo SINE Alu 12 305 -7 1006 89 30 0 chr5 51600640 51600809 -148029341 + (TA)n Simple_repeat Simple_repeat 2 175 0 21 36 0 0 chr5 51600976 51601004 -148029146 + AT_rich Low_complexity Low_complexity 1 28 0 485 289 180 22 chr5 51601120 51601487 -148028663 + MLT1J1 LTR MaLR 1 425 -21 708 273 39 19 chr5 51601517 51601722 -148028428 + MIR SINE MIR 48 256 -6 417 261 24 99 chr5 51602800 51603172 -148026978 + L1MC4a LINE L1 5696 6039 -1769 1014 136 52 75 chr5 51603329 51603442 -148026708 - MER2 DNA MER2_type -134 211 103 1612 27 0 0 chr5 51603442 51603666 -148026484 - AluY SINE Alu 0 321 98 1014 136 52 75 chr5 51603666 51603764 -148026386 - MER2 DNA MER2_type -242 103 4 1769 104 0 8 chr5 51603803 51604044 -148026106 - AluSg1 SINE Alu -21 288 50 189 171 0 0 chr5 51604397 51604432 -148025718 + GA-rich Low_complexity Low_complexity 2 36 0 28 48 0 0 chr5 51605889 51605931 -148024219 + AT_rich Low_complexity Low_complexity 1 42 0 399 193 0 0 chr5 51606233 51606316 -148023834 + CT-rich Low_complexity Low_complexity 4 86 0 1289 189 48 34 chr5 51606341 51606632 -148023518 - AluJo SINE Alu -5 307 13 221 364 68 11 chr5 51606770 51606858 -148023292 - MIR3 SINE MIR -102 106 14 * 753 278 16 5 chr5 51606851 51607042 -148023108 + MIR SINE MIR 70 262 0 2037 121 7 0 chr5 51607103 51607423 -148022727 + AluSx SINE Alu 1 322 0 218 312 101 28 chr5 51607894 51608003 -148022147 + L2 LINE L2 3148 3264 -8 223 240 0 20 chr5 51608120 51608170 -148021980 - MIR SINE MIR -102 160 112 1928 128 0 0 chr5 51609681 51609947 -148020203 + AluSg SINE Alu 1 266 -44 184 29 29 29 chr5 51610006 51610040 -148020110 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 2593 50 0 0 chr5 51612268 51612566 -148017584 + AluY SINE Alu 1 298 -13 23 0 0 0 chr5 51612573 51612596 -148017554 + AT_rich Low_complexity Low_complexity 1 23 0 316 336 67 18 chr5 51612845 51613172 -148016978 + HsTC2 DNA Tc2 505 847 -1051 21 0 0 0 chr5 51613583 51613604 -148016546 + AT_rich Low_complexity Low_complexity 1 21 0 642 210 56 37 chr5 51616408 51616570 -148013580 - MER20 DNA MER1_type -1 218 54 2319 106 22 30 chr5 51617802 51618169 -148011981 - THE1B LTR MaLR 0 364 1 282 381 25 25 chr5 51618397 51618633 -148011517 - L2 LINE L2 -557 2757 2522 1644 169 17 10 chr5 51718859 51719154 -147910996 - AluJb SINE Alu -13 299 3 348 208 164 18 chr5 51719176 51719332 -147910818 - MIR SINE MIR -63 199 23 271 328 0 38 chr5 51719534 51719717 -147910433 + GA-rich Low_complexity Low_complexity 1 176 0 722 329 79 37 chr5 51720362 51720920 -147909230 + L2 LINE L2 2697 3267 -46 180 0 0 0 chr5 51722005 51722025 -147908125 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 199 163 279 0 chr5 51724906 51724949 -147905201 + L2 LINE L2 3217 3271 -1 473 323 195 10 chr5 51726132 51726445 -147903705 + L3 LINE CR1 865 1235 -342 316 219 55 0 chr5 51726447 51726520 -147903630 - Charlie1 DNA MER1_type -4 2757 2681 9044 117 86 24 chr5 51726528 51728080 -147902070 + Tigger1 DNA MER2_type 1 1649 -769 4554 131 76 4 chr5 51728377 51729111 -147901039 + Tigger1 DNA MER2_type 1632 2418 0 933 226 88 27 chr5 51729111 51729439 -147900711 - Charlie1 DNA MER1_type -87 2674 2327 1071 191 24 0 chr5 51729443 51729653 -147900497 - Charlie1 DNA MER1_type -541 2220 2006 693 124 7 51 chr5 51729659 51729796 -147900354 - L1PA16 LINE L1 -1 6165 6035 244 205 0 103 chr5 51729797 51729875 -147900275 + Charlie1 DNA MER1_type 1949 2018 -743 349 138 299 0 chr5 51729916 51730003 -147900147 - Charlie1 DNA MER1_type -826 1935 1823 1357 171 74 4 chr5 51730048 51730303 -147899847 - MER2 DNA MER2_type 0 345 73 1829 188 58 24 chr5 51730303 51730485 -147899665 + MSTA LTR MaLR 1 175 -253 1885 96 11 0 chr5 51730485 51730745 -147899405 + AluSx SINE Alu 5 267 -45 1829 188 58 24 chr5 51730745 51730940 -147899210 + MSTA LTR MaLR 175 391 -37 1201 73 0 0 chr5 51730940 51731111 -147899039 - AluY SINE Alu 0 303 133 2337 91 0 0 chr5 51731111 51731409 -147898741 - AluY SINE Alu -9 302 5 279 143 0 0 chr5 51731412 51731454 -147898696 + MSTA LTR MaLR 387 428 0 442 195 0 13 chr5 51731454 51731531 -147898619 - MER2 DNA MER2_type -268 77 2 2225 90 7 3 chr5 51731905 51732206 -147897944 - AluSq SINE Alu -11 302 1 724 327 120 20 chr5 51732413 51732820 -147897330 - L2 LINE L2 -350 2964 2517 23 0 0 0 chr5 51733496 51733519 -147896631 + AT_rich Low_complexity Low_complexity 1 23 0 212 196 0 22 chr5 51733899 51733945 -147896205 + A-rich Low_complexity Low_complexity 2 46 0 962 176 78 0 chr5 51735176 51735380 -147894770 - Tigger7 DNA MER2_type -1 2490 2271 * 1769 155 10 14 chr5 51735354 51735645 -147894505 - Tigger7 DNA MER2_type -233 317 28 2491 47 3 0 chr5 51735947 51736246 -147893904 + AluY SINE Alu 1 300 -11 2165 117 3 3 chr5 51736642 51736951 -147893199 + AluSx SINE Alu 1 309 -3 2148 112 3 3 chr5 51736953 51737265 -147892885 + AluSp SINE Alu 1 312 -1 1875 208 69 11 chr5 51737533 51738078 -147892072 + L1M3 LINE L1 5176 5754 -426 208 183 133 33 chr5 51738706 51738766 -147891384 + MIR3 SINE MIR 137 202 -6 2655 158 16 4 chr5 51738885 51739517 -147890633 - L1ME LINE L1 -383 5783 5123 692 281 112 33 chr5 51739795 51740292 -147889858 + MLT1G1 LTR MaLR 1 585 -10 1775 179 0 6 chr5 51740833 51741145 -147889005 - AluJo SINE Alu -2 310 1 332 278 181 32 chr5 51741955 51742203 -147887947 + L1MB3 LINE L1 4549 4833 -1313 291 286 14 64 chr5 51742247 51742387 -147887763 + L1P LINE L1 4879 5011 -1135 276 111 0 0 chr5 51742389 51742434 -147887716 + (CA)n Simple_repeat Simple_repeat 1 45 0 5447 244 39 21 chr5 51742734 51744409 -147885741 + L1MC/D LINE L1 2115 3819 -2327 2598 181 44 29 chr5 51744407 51745041 -147885109 + L1MC/D LINE L1 4637 5308 -1036 * 2018 104 0 47 chr5 51745041 51745358 -147884792 + AluSx SINE Alu 2 303 -9 2598 181 44 29 chr5 51745358 51745757 -147884393 + L1MC/D LINE L1 5308 5699 -645 * 4074 168 15 28 chr5 51745756 51746538 -147883612 + L1MB3 LINE L1 5412 6183 0 708 303 116 33 chr5 51747224 51747266 -147882884 + MLT1I LTR MaLR 3 40 -369 3116 66 45 7 chr5 51747266 51747690 -147882460 - MLT2A1 LTR ERVL 0 444 5 708 303 116 33 chr5 51747690 51747984 -147882166 + MLT1I LTR MaLR 40 367 -42 31 0 0 0 chr5 51748431 51748462 -147881688 + AT_rich Low_complexity Low_complexity 1 31 0 517 250 79 26 chr5 51748753 51748905 -147881245 + MIR SINE MIR 37 196 -66 1406 136 64 34 chr5 51748988 51749253 -147880897 + Tigger1 DNA MER2_type 2146 2418 0 214 360 117 0 chr5 51749272 51749383 -147880767 + L2 LINE L2 2629 2752 -562 1769 142 14 10 chr5 51749416 51749711 -147880439 + AluJb SINE Alu 2 297 -15 22 0 0 0 chr5 51750143 51750165 -147879985 + AT_rich Low_complexity Low_complexity 1 22 0 1984 154 0 0 chr5 51750168 51750467 -147879683 + AluSq SINE Alu 1 299 -14 2210 78 0 11 chr5 51750469 51750789 -147879361 + AluY SINE Alu 1 282 -29 1944 157 0 0 chr5 51750941 51751235 -147878915 + AluSq SINE Alu 6 299 -14 2363 90 0 3 chr5 51751237 51751547 -147878603 + AluY SINE Alu 1 309 -2 2284 118 0 6 chr5 51751698 51752013 -147878137 - AluSq SINE Alu 0 313 1 2406 67 14 0 chr5 51752298 51752595 -147877555 - AluSp SINE Alu -11 302 2 1756 138 24 14 chr5 51752997 51753286 -147876864 + AluSx SINE Alu 1 292 -20 2068 93 57 0 chr5 51753426 51753706 -147876444 + AluSq SINE Alu 1 296 -17 2041 72 91 0 chr5 51754889 51755154 -147874996 + AluY SINE Alu 1 289 -22 292 403 50 31 chr5 51755239 51755398 -147874752 - L2 LINE L2 -9 3263 3102 3010 153 63 40 chr5 51755400 51755805 -147874345 + MER6A DNA MER2_type 1 427 -438 2415 60 0 0 chr5 51755805 51756136 -147874014 - AluY SINE Alu 0 331 1 3010 153 63 40 chr5 51756136 51756312 -147873838 + MER6A DNA MER2_type 427 597 -8 226 341 84 36 chr5 51756326 51756493 -147873657 - L2 LINE L2 -188 3084 2910 2105 124 20 0 chr5 51756933 51757239 -147872911 + AluSp SINE Alu 1 312 -1 613 123 41 41 chr5 51757249 51757420 -147872730 + GA-rich Low_complexity Low_complexity 2 172 0 261 331 47 39 chr5 51757427 51757554 -147872596 - L2 LINE L2 -930 2384 2257 1749 180 120 23 chr5 51757947 51758331 -147871819 - MLT1D LTR MaLR 0 505 85 1315 128 0 39 chr5 51758350 51758553 -147871597 - AluJo SINE Alu -30 282 88 553 81 40 81 chr5 51758554 51758653 -147871497 - MLT1D LTR MaLR -410 95 1 642 312 50 13 chr5 51758883 51759181 -147870969 - L2 LINE L2 -1263 2051 1743 203 234 13 0 chr5 51759240 51759317 -147870833 + GA-rich Low_complexity Low_complexity 2 79 0 418 288 268 15 chr5 51759372 51759570 -147870580 - MIR SINE MIR -13 249 2 314 324 154 12 chr5 51760792 51761051 -147869099 + LTR16C LTR ERVL 193 488 -3 182 346 0 0 chr5 51761059 51761111 -147869039 - L3 LINE CR1 -81 1496 1445 267 323 62 69 chr5 51761504 51761792 -147868358 + MLT1K LTR MaLR 277 562 -26 1616 139 3 52 chr5 51762224 51762548 -147867602 + AluSx SINE Alu 1 308 -4 673 91 8 50 chr5 51762555 51762676 -147867474 + AluSc SINE Alu 1 116 -193 23 0 0 0 chr5 51763624 51763647 -147866503 + AT_rich Low_complexity Low_complexity 1 23 0 186 189 0 0 chr5 51764027 51764064 -147866086 + A-rich Low_complexity Low_complexity 1 37 0 961 172 78 0 chr5 51765308 51765512 -147864638 - Tigger7 DNA MER2_type -1 2490 2271 * 1604 163 10 27 chr5 51765486 51765781 -147864369 - Tigger7 DNA MER2_type -233 317 28 1341 104 0 79 chr5 51766220 51766520 -147863630 + AluY SINE Alu 27 304 0 1806 182 66 37 chr5 51766520 51766717 -147863433 - MSTA LTR MaLR -37 391 201 1930 92 11 0 chr5 51766717 51766977 -147863173 - AluSx SINE Alu -45 267 5 1806 182 66 37 chr5 51766977 51767159 -147862991 - MSTA LTR MaLR -227 201 1 1362 167 74 4 chr5 51767159 51767414 -147862736 + MER2 DNA MER2_type 73 345 0 350 138 299 0 chr5 51767459 51767546 -147862604 + Charlie1 DNA MER1_type 1823 1935 -826 239 205 0 103 chr5 51767587 51767665 -147862485 - Charlie1 DNA MER1_type -743 2018 1949 689 124 7 51 chr5 51767666 51767803 -147862347 + L1PA16 LINE L1 6035 6165 -1 1054 191 24 0 chr5 51767809 51768019 -147862131 + Charlie1 DNA MER1_type 2006 2220 -541 900 229 88 27 chr5 51768023 51768351 -147861799 + Charlie1 DNA MER1_type 2327 2674 -87 4525 130 78 4 chr5 51768351 51769084 -147861066 - Tigger1 DNA MER2_type 0 2418 1632 9034 119 86 24 chr5 51769381 51770934 -147859216 - Tigger1 DNA MER2_type -769 1649 1 293 203 54 14 chr5 51770942 51771016 -147859134 + Charlie1 DNA MER1_type 2681 2757 -4 399 319 198 16 chr5 51771018 51771332 -147858818 - L3 LINE CR1 -342 1235 865 197 163 279 0 chr5 51772518 51772561 -147857589 - L2 LINE L2 -1 3271 3217 180 0 0 0 chr5 51775450 51775470 -147854680 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 590 325 81 52 chr5 51776556 51777122 -147853028 - L2 LINE L2 -46 3267 2697 271 328 0 38 chr5 51777766 51777949 -147852201 + CT-rich Low_complexity Low_complexity 1 176 0 342 208 164 18 chr5 51778151 51778307 -147851843 + MIR SINE MIR 23 199 -63 1659 173 17 10 chr5 51778329 51778624 -147851526 + AluJb SINE Alu 3 299 -13 1849 136 11 4 chr5 51779164 51779444 -147850706 + AluSx SINE Alu 1 282 -30 243 0 0 0 chr5 51779447 51779474 -147850676 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2011 78 34 84 chr5 51779521 51779841 -147850309 + AluSg SINE Alu 1 304 -6 812 224 153 34 chr5 51779909 51780347 -147849803 - L1ME4a LINE L1 -19 6102 5613 566 104 0 104 chr5 51780354 51780469 -147849681 + FLAM_C SINE Alu 32 134 -9 1599 241 54 20 chr5 51781104 51782025 -147848125 - L1MEc LINE L1 -3319 2896 1883 2661 36 3 0 chr5 51782025 51782333 -147847817 - AluY SINE Alu -2 309 1 1599 241 54 20 chr5 51782333 51782480 -147847670 - L1MEc LINE L1 -4332 1883 1742 565 223 102 0 chr5 51783342 51783539 -147846611 + L1MB8 LINE L1 2787 3003 -3143 * 3202 218 97 21 chr5 51783530 51784253 -147845897 + L1MB8 LINE L1 3601 4425 -1721 1673 198 10 19 chr5 51784253 51784566 -147845584 + AluJo SINE Alu 1 310 -2 3202 218 97 21 chr5 51784566 51784866 -147845284 + L1MB8 LINE L1 4425 4701 -1445 1764 174 0 22 chr5 51784870 51785187 -147844963 + AluJo SINE Alu 1 310 -2 543 263 46 14 chr5 51785190 51785201 -147844949 + L1MB8 LINE L1 5023 5032 -1114 2220 81 7 10 chr5 51785201 51785496 -147844654 + AluSg SINE Alu 1 294 -16 543 263 46 14 chr5 51785496 51785701 -147844449 + L1MB8 LINE L1 5032 5246 -900 1031 206 110 61 chr5 51785707 51786201 -147843949 + MER39 LTR ERV1 6 576 -9 4056 179 63 16 chr5 51786202 51787100 -147843050 + L1MB8 LINE L1 5239 6178 0 2062 239 51 48 chr5 51787095 51787159 -147842991 + L1MD2 LINE L1 5422 5484 -682 * 2492 84 0 0 chr5 51787159 51787468 -147842682 + AluSx SINE Alu 1 309 -3 2062 239 51 48 chr5 51787468 51788147 -147842003 + L1MD2 LINE L1 5484 6141 -25 26 0 0 0 chr5 51788147 51788173 -147841977 + AT_rich Low_complexity Low_complexity 1 26 0 528 285 37 42 chr5 51788270 51788484 -147841666 + L3 LINE CR1 1101 1313 -264 299 311 47 9 chr5 51788564 51788670 -147841480 + L3 LINE CR1 1467 1576 -1 302 264 196 27 chr5 51789764 51789912 -147840238 + MER5B DNA MER1_type 6 178 0 26 50 0 0 chr5 51790087 51790127 -147840023 + AT_rich Low_complexity Low_complexity 1 40 0 1784 153 28 59 chr5 51790924 51790995 -147839155 - MER2 DNA MER2_type 0 344 272 2317 94 0 7 chr5 51790995 51791293 -147838857 + AluSg SINE Alu 2 297 -13 1784 153 28 59 chr5 51791293 51791575 -147838575 - MER2 DNA MER2_type -72 272 2 519 284 68 11 chr5 51791576 51791752 -147838398 + MIR SINE MIR 71 256 -6 2266 63 18 3 chr5 51791967 51792251 -147837899 - AluSg SINE Alu -22 288 1 729 309 43 36 chr5 51792811 51793115 -147837035 - MLT1I LTR MaLR -6 403 98 1635 163 47 11 chr5 51793313 51793589 -147836561 + AluSx SINE Alu 1 286 -26 2149 112 0 0 chr5 51794345 51794639 -147835511 + AluSq SINE Alu 5 298 -15 2553 61 0 0 chr5 51794884 51795195 -147834955 - AluY SINE Alu 0 311 1 1639 114 0 0 chr5 51795923 51796151 -147833999 + AluSg/x SINE Alu 85 312 0 4059 191 43 55 chr5 51798529 51799968 -147830182 - L1MD1 LINE L1 -10 6232 4812 762 249 84 45 chr5 51800769 51801078 -147829072 + MLT1L LTR MaLR 285 605 -10 325 333 54 9 chr5 51801230 51801341 -147828809 + L2 LINE L2 3157 3272 0 627 206 59 6 chr5 51802449 51802619 -147827531 - MER104 DNA MER2_type -1 179 1 626 269 112 48 chr5 51802619 51802671 -147827479 + MLT1J LTR MaLR 16 63 -448 198 0 0 0 chr5 51802671 51802693 -147827457 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 626 269 112 48 chr5 51802693 51802971 -147827179 + MLT1J LTR MaLR 63 367 -144 2011 287 80 29 chr5 51802977 51803626 -147826524 + L2 LINE L2 928 1609 -1705 1039 197 21 22 chr5 51803628 51803731 -147826419 + L1MC/D LINE L1 5035 5137 -1067 2122 112 0 14 chr5 51803731 51804037 -147826113 + AluSx SINE Alu 1 302 0 1039 197 21 22 chr5 51804037 51804358 -147825792 + L1MC/D LINE L1 5137 5461 -743 1142 243 142 40 chr5 51804369 51804817 -147825333 + L2 LINE L2 2522 3046 -267 943 251 84 81 chr5 51804817 51805338 -147824812 - LTR33A LTR ERVL 0 523 1 1142 243 142 40 chr5 51805338 51805378 -147824772 + L2 LINE L2 3046 3081 -232 379 317 84 87 chr5 51805635 51806051 -147824099 - LTR67 LTR ERVL -141 416 2 2321 107 0 0 chr5 51806266 51806565 -147823585 - AluSx SINE Alu -13 299 1 22 35 0 0 chr5 51806671 51806700 -147823450 + AT_rich Low_complexity Low_complexity 1 29 0 401 335 40 20 chr5 51806705 51806905 -147823245 - MIR SINE MIR -49 213 10 255 31 0 0 chr5 51806934 51806966 -147823184 + (TG)n Simple_repeat Simple_repeat 2 33 0 960 262 165 20 chr5 51807579 51807657 -147822493 - MLT1J2 LTR MaLR 0 450 385 1852 170 3 0 chr5 51807657 51807951 -147822199 + AluSx SINE Alu 1 295 -17 960 262 165 20 chr5 51807951 51808265 -147821885 - MLT1J2 LTR MaLR -65 385 1 1761 108 67 11 chr5 51808554 51808866 -147821284 - AluSx SINE Alu 0 327 1 1821 174 70 36 chr5 51809114 51809556 -147820594 - LTR2B LTR ERV1 0 490 34 2423 77 0 0 chr5 51809696 51809995 -147820155 - AluY SINE Alu -12 299 1 434 246 63 24 chr5 51810068 51810194 -147819956 + MLT1G1 LTR MaLR 459 589 -6 363 213 0 0 chr5 51810316 51810391 -147819759 + MER94 DNA DNA 60 134 0 23 0 0 0 chr5 51810817 51810840 -147819310 + AT_rich Low_complexity Low_complexity 1 23 0 745 245 69 92 chr5 51810840 51811219 -147818931 - MLT1J2 LTR MaLR -76 374 5 589 196 0 0 chr5 51814962 51815059 -147815091 - FLAM_A SINE Alu -26 116 20 221 240 60 0 chr5 51815341 51815391 -147814759 - MIR SINE MIR -13 249 197 248 231 0 0 chr5 51816921 51816973 -147813177 + LTR30 LTR ERV1 1 52 -670 2395 117 11 70 chr5 51817015 51817469 -147812681 + LTR12 LTR ERV1 55 481 -233 881 234 0 0 chr5 51817563 51817738 -147812412 - FAM SINE Alu 0 175 1 260 219 96 0 chr5 51818021 51818094 -147812056 - L1ME4a LINE L1 -106 6015 5936 325 271 35 49 chr5 51818131 51818275 -147811875 - L1ME4a LINE L1 -461 5660 5519 588 214 25 116 chr5 51818359 51818656 -147811494 + MLT1D LTR MaLR 1 270 -197 580 338 93 20 chr5 51819082 51819604 -147810546 + L1ME4a LINE L1 5354 5919 -202 266 280 53 8 chr5 51819648 51819780 -147810370 + HAL1b LINE L1 1211 1348 0 399 149 0 14 chr5 51820661 51820735 -147809415 - MER3 DNA MER1_type 0 2624 2552 357 186 0 93 chr5 51820751 51820848 -147809302 - MER3 DNA MER1_type -100 109 22 1982 141 0 0 chr5 51821053 51821336 -147808814 + AluSq SINE Alu 1 283 -30 312 27 0 0 chr5 51821787 51821824 -147808326 + (TG)n Simple_repeat Simple_repeat 2 38 0 3382 141 27 31 chr5 51821827 51822464 -147807686 - L1MC1 LINE L1 -9 6324 5691 1229 138 9 27 chr5 51822467 51822692 -147807458 + L1MC1 LINE L1 5468 5688 -645 1197 168 157 87 chr5 51822754 51823124 -147807026 + MSTD LTR MaLR 1 396 0 438 20 0 0 chr5 51824051 51824102 -147806048 + (CA)n Simple_repeat Simple_repeat 2 52 0 2405 59 0 33 chr5 51824103 51824408 -147805742 - AluY SINE Alu -16 295 1 509 138 0 0 chr5 51824535 51824615 -147805535 - MADE1 DNA Mariner 0 80 1 349 390 8 0 chr5 51825126 51825249 -147804901 - L2 LINE L2 -2 3270 3147 2111 110 31 0 chr5 51825658 51825948 -147804202 - AluSc SINE Alu -10 299 1 1947 127 34 14 chr5 51825953 51826245 -147803905 - AluSx SINE Alu -14 298 1 2495 71 0 0 chr5 51826557 51826853 -147803297 - AluY SINE Alu -15 296 1 6170 158 47 69 chr5 51826989 51827486 -147802664 + L1MB3 LINE L1 8 514 -5870 2393 102 0 9 chr5 51827486 51827801 -147802349 - AluSx SINE Alu 0 312 1 6170 158 47 69 chr5 51827801 51827902 -147802248 + L1MB3 LINE L1 514 616 -5768 2029 158 7 0 chr5 51827902 51828199 -147801951 + AluSx SINE Alu 1 299 -13 6170 158 47 69 chr5 51828199 51828733 -147801417 + L1MB3 LINE L1 616 1160 -5224 2138 138 3 0 chr5 51828733 51829031 -147801119 + AluSx SINE Alu 1 299 -13 6170 158 47 69 chr5 51829031 51829150 -147801000 + L1MB3 LINE L1 1160 1280 -5104 2092 135 6 13 chr5 51829150 51829461 -147800689 + AluSq SINE Alu 1 309 -4 6170 158 47 69 chr5 51829461 51829733 -147800417 + L1MB3 LINE L1 1280 1501 -4883 5312 226 37 58 chr5 51829740 51829850 -147800300 + L1MB3 LINE L1 2869 2980 -3402 2566 59 0 3 chr5 51829850 51830157 -147799993 - AluY SINE Alu -5 306 1 5312 226 37 58 chr5 51830157 51830327 -147799823 + L1MB3 LINE L1 2980 3152 -3230 5455 128 20 2 chr5 51830327 51831030 -147799120 + L1PA16 LINE L1 4281 4970 -1196 2341 97 3 0 chr5 51831030 51831328 -147798822 + AluSp SINE Alu 1 299 -14 5455 128 20 2 chr5 51831328 51832481 -147797669 + L1PA16 LINE L1 4970 6160 -6 5312 226 37 58 chr5 51832481 51833659 -147796491 + L1MB3 LINE L1 3152 4277 -2105 2060 130 0 19 chr5 51833659 51833975 -147796175 + AluSg SINE Alu 1 310 0 5312 226 37 58 chr5 51833975 51834534 -147795616 + L1MB3 LINE L1 4277 4846 -1536 300 200 44 33 chr5 51834539 51834629 -147795521 + L1MC4 LINE L1 6613 6703 -1339 25 31 0 0 chr5 51834629 51834661 -147795489 + AT_rich Low_complexity Low_complexity 1 32 0 707 70 35 44 chr5 51834663 51834893 -147795257 + (TA)n Simple_repeat Simple_repeat 1 227 0 4015 160 38 65 chr5 51834893 51836030 -147794120 + L1MB3 LINE L1 4856 6022 -397 1953 162 0 0 chr5 51836030 51836326 -147793824 + AluSx SINE Alu 1 296 -16 4015 160 38 65 chr5 51836326 51836433 -147793717 + L1MB3 LINE L1 6022 6130 -289 5329 143 30 7 chr5 51836433 51836471 -147793679 - L1PA15 LINE L1 -16 6149 6113 2566 127 0 5 chr5 51836471 51836848 -147793302 + THE1C LTR MaLR 1 375 0 5329 143 30 7 chr5 51836848 51838392 -147791758 - L1PA15 LINE L1 -52 6113 4553 4015 160 38 65 chr5 51838392 51838725 -147791425 + L1MB3 LINE L1 6130 6380 -39 1289 191 8 115 chr5 51838744 51839126 -147791024 + MLT1A1 LTR MaLR 25 365 0 579 375 68 11 chr5 51839539 51839920 -147790230 + L2 LINE L2 2571 2973 -341 354 305 48 19 chr5 51840142 51840247 -147789903 + L2 LINE L2 3162 3269 -3 812 177 14 0 chr5 51840633 51840780 -147789370 - MLT1C LTR MaLR 0 467 319 3030 133 51 4 chr5 51840807 51841319 -147788831 + L1PA16 LINE L1 5609 6144 -22 21 57 0 0 chr5 51841324 51841359 -147788791 + AT_rich Low_complexity Low_complexity 1 35 0 252 100 0 0 chr5 51841830 51841870 -147788280 + (GA)n Simple_repeat Simple_repeat 2 41 0 2313 190 79 34 chr5 51841998 51842028 -147788122 + MLT1E3 LTR MaLR 1 28 -596 1629 206 22 8 chr5 51842028 51842387 -147787763 - MLT1A1 LTR MaLR -1 364 1 2313 190 79 34 chr5 51842387 51842940 -147787210 + MLT1E3 LTR MaLR 28 610 -14 20708 155 23 26 chr5 51843197 51843343 -147786807 + L1M1 LINE L1 10 155 -7410 2356 79 3 16 chr5 51843343 51843646 -147786504 - AluSp SINE Alu -12 301 3 20708 155 23 26 chr5 51843646 51844415 -147785735 + L1M1 LINE L1 155 925 -6640 2339 98 0 3 chr5 51844415 51844720 -147785430 + AluSg SINE Alu 1 304 -6 20708 155 23 26 chr5 51844720 51848239 -147781911 + L1M1 LINE L1 925 4430 -3135 3377 99 17 36 chr5 51848241 51848483 -147781667 + L1MA3 LINE L1 5742 5987 -318 1678 154 148 34 chr5 51848483 51848867 -147781283 + MSTA LTR MaLR 1 428 0 8385 153 38 34 chr5 51848869 51849327 -147780823 + MSTA-int LTR MaLR 3 458 -1122 2289 122 3 0 chr5 51849327 51849639 -147780511 + AluSp SINE Alu 1 313 0 8385 153 38 34 chr5 51849639 51850752 -147779398 + MSTA-int LTR MaLR 458 1580 0 2031 155 134 8 chr5 51850752 51851132 -147779018 + MSTA LTR MaLR 1 428 0 3377 99 17 36 chr5 51851132 51851460 -147778690 + L1MA3 LINE L1 5986 6305 0 350 239 97 82 chr5 51851831 51852049 -147778101 + L1MC4a LINE L1 5607 5833 -1975 2368 87 0 10 chr5 51852049 51852361 -147777789 + AluY SINE Alu 2 310 -1 350 239 97 82 chr5 51852361 51852473 -147777677 + L1MC4a LINE L1 5833 5942 -1866 356 200 200 55 chr5 51853094 51853204 -147776946 - FLAM_A SINE Alu 0 133 8 4108 133 11 22 chr5 51855429 51856148 -147774002 + MER50 LTR ERV1 1 711 -23 494 271 26 20 chr5 51856150 51856301 -147773849 - L1MB7 LINE L1 -103 6081 5930 1662 182 19 10 chr5 51857208 51857389 -147772761 - AluJo SINE Alu 0 312 134 297 0 0 0 chr5 51857389 51857422 -147772728 + (TG)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr5 51857421 51857442 -147772708 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 1662 182 19 10 chr5 51857422 51857568 -147772582 - AluJo SINE Alu -178 134 2 235 189 63 63 chr5 51857634 51857729 -147772421 + LTR67 LTR ERVL 39 133 -424 2267 110 0 0 chr5 51857892 51858201 -147771949 + AluY SINE Alu 1 309 -2 30234 41 2 1 chr5 51858352 51863065 -147767085 - L1PA5 LINE L1 -2 6152 1436 633 319 28 16 chr5 51863164 51863418 -147766732 - Charlie8 DNA MER1_type -2160 257 1 289 333 16 8 chr5 51863603 51863726 -147766424 - L2 LINE L2 -1405 1909 1786 1947 162 3 19 chr5 51863760 51863868 -147766282 - AluJb SINE Alu 0 312 204 2031 222 32 56 chr5 51863868 51864436 -147765714 - MLT2B3 LTR ERVL 0 554 1 1947 162 3 19 chr5 51864436 51864642 -147765508 - AluJb SINE Alu -108 204 3 301 165 55 8 chr5 51864684 51864811 -147765339 + (TA)n Simple_repeat Simple_repeat 2 134 0 366 128 32 0 chr5 51865235 51865329 -147764821 + (TA)n Simple_repeat Simple_repeat 2 98 0 208 91 45 0 chr5 51865361 51865405 -147764745 + (TA)n Simple_repeat Simple_repeat 1 46 0 772 257 16 11 chr5 51866342 51866529 -147763621 - MER5A DNA MER1_type -1 188 1 534 330 6 0 chr5 51868144 51868323 -147761827 - MIR SINE MIR -13 249 70 896 223 29 108 chr5 51868632 51869077 -147761073 - L1MC4 LINE L1 0 8042 7633 22 0 0 0 chr5 51869186 51869208 -147760942 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 51869443 51869466 -147760684 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr5 51871013 51871036 -147759114 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr5 51871113 51871141 -147759009 + AT_rich Low_complexity Low_complexity 1 28 0 306 73 0 0 chr5 51872028 51872069 -147758081 + (T)n Simple_repeat Simple_repeat 1 41 0 25 31 0 0 chr5 51873222 51873254 -147756896 + AT_rich Low_complexity Low_complexity 1 32 0 211 339 17 17 chr5 51875353 51875468 -147754682 + G-rich Low_complexity Low_complexity 3 117 0 186 43 0 0 chr5 51875497 51875520 -147754630 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 646 118 22 22 chr5 51875791 51875927 -147754223 + GA-rich Low_complexity Low_complexity 1 136 0 216 0 0 0 chr5 51876655 51876679 -147753471 + (T)n Simple_repeat Simple_repeat 1 24 0 200 97 32 0 chr5 51876839 51876870 -147753280 + T-rich Low_complexity Low_complexity 4 35 0 23 78 0 0 chr5 51877380 51877431 -147752719 + GC_rich Low_complexity Low_complexity 1 51 0 25 51 0 0 chr5 51877463 51877502 -147752648 + GC_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr5 51877961 51877997 -147752153 + GC_rich Low_complexity Low_complexity 1 36 0 234 176 0 0 chr5 51878003 51878054 -147752096 + (TG)n Simple_repeat Simple_repeat 1 51 0 219 230 0 80 chr5 51878979 51879079 -147751071 + C-rich Low_complexity Low_complexity 3 94 0 415 317 6 27 chr5 51879499 51879682 -147750468 + CT-rich Low_complexity Low_complexity 2 180 0 225 0 0 0 chr5 51882174 51882199 -147747951 + (TA)n Simple_repeat Simple_repeat 1 25 0 3122 130 50 4 chr5 51883008 51883493 -147746657 - MER84 LTR ERV1 0 507 1 765 165 25 19 chr5 51883581 51883739 -147746411 + MLT1A1 LTR MaLR 207 365 0 1332 227 60 3 chr5 51883785 51884168 -147745982 - L1M4 LINE L1 -1267 4879 4475 316 322 96 28 chr5 51886122 51886430 -147743720 - L2 LINE L2 -218 3054 2719 533 335 10 0 chr5 51886487 51886684 -147743466 - L2 LINE L2 -741 2573 2375 2231 110 7 0 chr5 51887029 51887321 -147742829 + AluSq SINE Alu 2 295 -18 373 337 95 8 chr5 51887545 51887797 -147742353 + L1MC4a LINE L1 7140 7413 -395 241 274 57 76 chr5 51887991 51888148 -147742002 + LTR16C LTR ERVL 325 478 -13 436 287 138 29 chr5 51888557 51888731 -147741419 + L2 LINE L2 2836 3028 -285 857 281 86 39 chr5 51888925 51889331 -147740819 - L1MC4a LINE L1 -824 6984 6560 2167 123 0 3 chr5 51889355 51889657 -147740493 + AluSq SINE Alu 1 301 -12 3743 165 10 42 chr5 51889663 51889704 -147740446 - L1MB7 LINE L1 -11 6173 6132 1758 152 10 14 chr5 51889704 51889993 -147740157 - AluJb SINE Alu -20 292 5 3743 165 10 42 chr5 51889993 51890721 -147739429 - L1MB7 LINE L1 -52 6132 5428 2274 101 17 0 chr5 51891121 51891418 -147738732 - AluSg1 SINE Alu -7 302 1 30 27 0 0 chr5 51891461 51891498 -147738652 + AT_rich Low_complexity Low_complexity 1 37 0 469 233 73 13 chr5 51891821 51891971 -147738179 - L1ME4a LINE L1 0 6121 5963 180 167 0 28 chr5 51892800 51892836 -147737314 + L2 LINE L2 3263 3297 -16 30 59 0 0 chr5 51895288 51895339 -147734811 + AT_rich Low_complexity Low_complexity 1 51 0 212 270 32 0 chr5 51896824 51896887 -147733263 - MIR SINE MIR -14 248 184 1338 151 50 37 chr5 51896918 51897020 -147733130 - L1MC3 LINE L1 -8 7777 7678 2216 120 0 0 chr5 51897020 51897320 -147732830 + AluSx SINE Alu 1 300 -12 1338 151 50 37 chr5 51897320 51897516 -147732634 - L1MC3 LINE L1 -107 7678 7475 381 269 207 0 chr5 51897522 51897667 -147732483 - MIR SINE MIR -74 188 14 208 304 78 29 chr5 51898160 51898262 -147731888 + L2 LINE L2 3207 3313 0 4960 97 12 13 chr5 51898879 51899571 -147730579 - LTR8 LTR ERV1 0 691 1 2068 132 0 7 chr5 51899993 51900348 -147729802 + AluSx SINE Alu 7 312 0 233 220 55 11 chr5 51900737 51900828 -147729322 - L1ME4a LINE L1 -223 5898 5804 213 258 189 30 chr5 51901123 51901255 -147728895 + MER5B DNA MER1_type 26 178 0 279 313 54 0 chr5 51902264 51902376 -147727774 + MIR SINE MIR 145 262 0 201 213 21 0 chr5 51904225 51904272 -147725878 + MIR SINE MIR 92 139 -123 346 296 45 57 chr5 51904747 51904923 -147725227 + L2 LINE L2 2662 2835 -479 260 350 138 24 chr5 51904937 51905060 -147725090 + L2 LINE L2 3136 3272 0 313 346 89 41 chr5 51905219 51905511 -147724639 + L2 LINE L2 2442 2747 -567 291 279 89 13 chr5 51905588 51905667 -147724483 - L2 LINE L2 -3 3310 3226 265 338 35 28 chr5 51905999 51906144 -147724006 + L2 LINE L2 3161 3306 -7 211 114 29 0 chr5 51906770 51906805 -147723345 - L2 LINE L2 -8 3305 3270 241 247 247 0 chr5 51906810 51906899 -147723251 + L2 LINE L2 3162 3272 0 184 273 0 0 chr5 51906964 51907008 -147723142 - L2 LINE L2 -12 3260 3217 * 214 296 49 12 chr5 51906980 51907061 -147723089 - MIR SINE MIR -22 240 157 1920 141 0 67 chr5 51908816 51909143 -147721007 - AluJo SINE Alu -7 305 1 190 326 21 21 chr5 51909203 51909298 -147720852 - L2 LINE L2 -780 2534 2440 532 269 110 14 chr5 51909349 51909568 -147720582 - L2 LINE L2 -1 3312 3073 195 296 0 0 chr5 51909693 51909747 -147720403 - L2 LINE L2 -1041 2273 2220 212 59 29 0 chr5 51910690 51910724 -147719426 + (CAA)n Simple_repeat Simple_repeat 1 35 0 428 95 119 24 chr5 51911292 51911376 -147718774 - AluSg/x SINE Alu -14 295 204 586 74 0 0 chr5 51911409 51911490 -147718660 - AluSc SINE Alu -228 81 1 333 218 0 13 chr5 51913587 51913665 -147716485 - MER116 DNA Mariner -3 77 1 1513 156 27 16 chr5 51914214 51914471 -147715679 + AluJo SINE Alu 1 260 -52 2201 99 3 0 chr5 51914594 51914907 -147715243 + AluSp SINE Alu 1 314 0 366 123 0 0 chr5 51915007 51915064 -147715086 + (GA)n Simple_repeat Simple_repeat 2 58 0 1309 201 10 97 chr5 51916428 51916642 -147713508 - L1MA10 LINE L1 -7 6327 6163 2192 103 0 3 chr5 51916642 51916934 -147713216 + AluSc SINE Alu 3 293 -16 1309 201 10 97 chr5 51916934 51917123 -147713027 - L1MA10 LINE L1 -171 6163 5959 458 205 17 60 chr5 51917243 51917360 -147712790 - L1PA16 LINE L1 -23 6143 6032 366 91 0 0 chr5 51917713 51917768 -147712382 + (TG)n Simple_repeat Simple_repeat 2 56 0 23 0 0 0 chr5 51918892 51918915 -147711235 + AT_rich Low_complexity Low_complexity 1 23 0 1935 149 19 10 chr5 51920070 51920378 -147709772 + AluJb SINE Alu 1 311 -1 776 228 11 54 chr5 51921205 51921389 -147708761 - MER5B DNA MER1_type -2 176 1 770 310 18 22 chr5 51921502 51921731 -147708419 - MIR SINE MIR -34 228 1 740 183 39 44 chr5 51921952 51922132 -147708018 - MER20 DNA MER1_type -6 213 35 569 303 84 0 chr5 51922230 51922468 -147707682 - MARNA DNA Mariner -51 535 278 417 323 0 85 chr5 51922996 51923041 -147707109 + MER5B DNA MER1_type 3 50 -128 215 91 0 23 chr5 51923041 51923085 -147707065 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 417 323 0 85 chr5 51923085 51923102 -147707048 + MER5B DNA MER1_type 50 67 -111 2159 121 0 0 chr5 51923102 51923412 -147706738 + AluSx SINE Alu 2 311 0 417 323 0 85 chr5 51923412 51923534 -147706616 + MER5B DNA MER1_type 67 175 -3 234 382 13 0 chr5 51923712 51923788 -147706362 - MIR SINE MIR -152 110 34 454 211 263 31 chr5 51923934 51924128 -147706022 - MIR SINE MIR -17 245 7 924 143 98 30 chr5 51924148 51924351 -147705799 + MER20 DNA MER1_type 1 217 -2 247 211 0 0 chr5 51924669 51924721 -147705429 + T-rich Low_complexity Low_complexity 1 52 0 292 210 198 0 chr5 51925880 51925961 -147704189 + L2 LINE L2 3217 3313 0 2215 123 0 0 chr5 51926672 51926980 -147703170 + AluSx SINE Alu 1 308 -4 254 91 0 0 chr5 51927180 51927213 -147702937 - MER46C DNA MER2_type -227 111 79 * 306 280 47 19 chr5 51927211 51927318 -147702832 - MER46C DNA MER2_type -225 113 4 3591 152 33 23 chr5 51927625 51928269 -147701881 - MER39B LTR ERV1 0 653 4 403 340 142 31 chr5 51928320 51928744 -147701406 + L2 LINE L2 2199 2669 -645 243 314 0 12 chr5 51928938 51929024 -147701126 + Tigger6 DNA MER2_type 2 86 -1511 517 268 80 7 chr5 51930132 51930434 -147699716 - L1ME4a LINE L1 -225 5896 5573 390 237 189 11 chr5 51930447 51930665 -147699485 - L1ME4a LINE L1 -710 5532 5274 204 343 71 20 chr5 51930679 51930778 -147699372 - L2 LINE L2 -1 3271 3168 189 107 0 0 chr5 51932254 51932282 -147697868 + (T)n Simple_repeat Simple_repeat 1 28 0 235 267 0 0 chr5 51933231 51933276 -147696874 + L2 LINE L2 3250 3294 -19 1064 162 39 15 chr5 51933375 51933579 -147696571 - MER20 DNA MER1_type -8 211 3 286 368 136 0 chr5 51933883 51934038 -147696112 + MIR3 SINE MIR 3 178 -30 894 233 5 21 chr5 51935812 51936001 -147694149 + MER5A DNA MER1_type 1 186 -3 313 265 219 27 chr5 51936961 51937180 -147692970 + MIR SINE MIR 2 262 0 2090 195 88 29 chr5 51937984 51938496 -147691654 + MLT1F LTR MaLR 1 542 0 25 51 0 0 chr5 51939546 51939585 -147690565 + AT_rich Low_complexity Low_complexity 1 39 0 306 91 0 0 chr5 51940220 51940264 -147689886 - MER58 DNA MER1_type -4 2416 2373 1138 195 15 50 chr5 51940370 51940631 -147689519 - MLT1A2 LTR MaLR -122 252 1 3990 196 82 13 chr5 51940711 51941690 -147688460 - L1MB4 LINE L1 -6 6174 5265 2165 100 4 0 chr5 51941690 51941999 -147688151 - AluSg SINE Alu 0 310 1 3990 196 82 13 chr5 51941999 51942909 -147687241 - L1MB4 LINE L1 -915 5265 4046 1475 173 73 11 chr5 51942936 51943208 -147686942 - AluJo SINE Alu -1 311 23 648 252 106 47 chr5 51943237 51943829 -147686321 - L1MDa LINE L1 -4771 1444 863 29341 91 5 8 chr5 51943872 51949164 -147680986 - L1PA7 LINE L1 -3 6151 877 8702 133 114 5 chr5 51949271 51950898 -147679252 - L1P3 LINE L1 -4660 1791 6 479 309 32 44 chr5 51951211 51951551 -147678599 - L1MDa LINE L1 -5994 402 67 1108 200 86 49 chr5 51951967 51952465 -147677685 + MER39 LTR ERV1 8 687 -6 180 0 0 0 chr5 51953279 51953299 -147676851 + (TTCTG)n Simple_repeat Simple_repeat 2 21 0 220 148 98 0 chr5 51953306 51953367 -147676783 + CT-rich Low_complexity Low_complexity 5 71 0 543 218 0 10 chr5 51953369 51953470 -147676680 - FLAM_A SINE Alu -33 109 10 1945 118 7 7 chr5 51953633 51953913 -147676237 + AluSq SINE Alu 1 280 -33 210 37 0 0 chr5 51953913 51953940 -147676210 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 1502 195 22 35 chr5 51953965 51954278 -147675872 + AluJb SINE Alu 3 311 -1 394 208 0 0 chr5 51954699 51954771 -147675379 - MER39 LTR ERV1 -30 677 606 651 211 0 16 chr5 51954784 51954912 -147675238 - FLAM_A SINE Alu -7 126 1 7656 182 83 31 chr5 51954941 51955359 -147674791 - LTR49-int LTR ERV1 -326 4610 4215 1901 171 91 15 chr5 51955359 51955757 -147674393 + MSTA LTR MaLR 1 428 0 7656 182 83 31 chr5 51955757 51957167 -147672983 - LTR49-int LTR ERV1 -721 4215 2703 1397 149 41 4 chr5 51957176 51957445 -147672705 + L1PA13 LINE L1 5883 6161 -2 1410 202 109 106 chr5 51957445 51958297 -147671853 - LTR49-int LTR ERV1 -2395 2541 1687 333 250 117 33 chr5 51958313 51958433 -147671717 - LTR57-int LTR ERVL -3832 1511 1382 277 226 176 29 chr5 51958544 51958646 -147671504 - MER67D LTR ERV1 -294 220 104 1058 216 84 81 chr5 51958691 51959085 -147671065 - LTR49-int LTR ERV1 -4064 872 478 2463 156 22 29 chr5 51959085 51959502 -147670648 - MSTB1 LTR MaLR 0 432 19 327 264 209 7 chr5 51959588 51959736 -147670414 - LTR49-int LTR ERV1 -5638 693 516 236 296 174 0 chr5 51959743 51959841 -147670309 + L2 LINE L2 3197 3311 -2 195 232 347 11 chr5 51959915 51960010 -147670140 - MIR SINE MIR -121 141 15 24 0 0 0 chr5 51961937 51961961 -147668189 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 51963157 51963179 -147666971 + AT_rich Low_complexity Low_complexity 1 22 0 958 55 79 0 chr5 51964008 51964135 -147666015 + MER85 DNA T2_type 1 137 -2 1373 141 157 23 chr5 51965416 51965715 -147664435 + MER44D DNA MER2_type 1 609 0 21 0 0 0 chr5 51965796 51965817 -147664333 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr5 51965904 51965929 -147664221 + AT_rich Low_complexity Low_complexity 1 25 0 1551 192 3 16 chr5 51965936 51966244 -147663906 - AluJo SINE Alu -8 304 1 503 241 123 54 chr5 51967337 51967540 -147662610 + MER20 DNA MER1_type 1 217 -2 409 271 60 7 chr5 51967642 51967793 -147662357 + MLT1E LTR MaLR 1 159 -434 4229 147 89 5 chr5 51967930 51968694 -147661456 - L1PA16 LINE L1 -1 6165 5338 1531 211 45 48 chr5 51968995 51969483 -147660667 - MER39 LTR ERV1 0 707 23 31 26 0 0 chr5 51969900 51969938 -147660212 + AT_rich Low_complexity Low_complexity 1 38 0 34 72 0 0 chr5 51970201 51970270 -147659880 + AT_rich Low_complexity Low_complexity 1 69 0 2409 56 7 7 chr5 51970491 51970796 -147659354 - AluY SINE Alu -6 305 1 260 204 21 65 chr5 51972387 51972480 -147657670 - L1ME4a LINE L1 -97 6024 5936 343 286 109 0 chr5 51972490 51972637 -147657513 - L1M4 LINE L1 -1674 4472 4310 260 204 21 65 chr5 51974459 51974552 -147655598 - L1ME4a LINE L1 -97 6024 5936 380 270 177 23 chr5 51974580 51974925 -147655225 - L1M4 LINE L1 -1694 4452 4055 1156 208 47 59 chr5 51975935 51976362 -147653788 - L1ME3A LINE L1 0 6170 5666 273 274 151 0 chr5 51977022 51977128 -147653022 - L1ME LINE L1 -5943 127 6 2256 112 0 0 chr5 51978442 51978745 -147651405 + AluSx SINE Alu 5 307 -5 180 0 0 0 chr5 51979577 51979597 -147650553 + (A)n Simple_repeat Simple_repeat 1 20 0 478 288 0 35 chr5 51979919 51980087 -147650063 - L3 LINE CR1 -535 1042 881 351 292 156 13 chr5 51980087 51980241 -147649909 + MIR SINE MIR 2 177 -85 302 239 401 12 chr5 51980589 51980756 -147649394 + MIR SINE MIR 4 235 -27 16733 33 5 3 chr5 51980798 51983606 -147646544 - L1PA4 LINE L1 -1 6154 3336 24466 58 3 4 chr5 51983613 51986764 -147643386 - L1PA4 LINE L1 -2995 3151 4 353 285 32 65 chr5 51987302 51987425 -147642725 + L2 LINE L2 3152 3270 -2 1963 162 7 0 chr5 51987448 51987756 -147642394 + AluSx SINE Alu 3 312 0 2289 62 3 62 chr5 51987976 51988296 -147641854 + AluSp SINE Alu 1 301 -12 277 299 25 76 chr5 51988516 51988673 -147641477 + MIR3 SINE MIR 21 169 -39 219 216 39 20 chr5 51988936 51988987 -147641163 - L3 LINE CR1 -568 1009 958 1869 116 32 39 chr5 51989269 51989553 -147640597 - AluSx SINE Alu -30 282 1 341 233 155 9 chr5 51989640 51989756 -147640394 - MIR SINE MIR -31 231 99 757 209 32 6 chr5 51989790 51989948 -147640202 + MER58B DNA MER1_type 179 340 -1 190 228 174 65 chr5 51990416 51990508 -147639642 - L2 LINE L2 -3 3269 3168 1226 158 161 0 chr5 51991106 51991385 -147638765 + MER33 DNA MER1_type 1 324 0 872 193 153 40 chr5 51993029 51993402 -147636748 - LTR37A LTR ERV1 -4 422 8 637 232 90 26 chr5 51993403 51993636 -147636514 - MER31-int LTR ERV1 -762 5569 5322 206 309 15 44 chr5 51993652 51993720 -147636430 - MER5A DNA MER1_type -87 102 37 450 179 21 103 chr5 51994009 51994154 -147635996 - MER31-int LTR ERV1 -1987 2949 2817 275 225 50 0 chr5 51994697 51994777 -147635373 - MER31-int LTR ERV1 -3021 1915 1832 1364 241 91 21 chr5 51994789 51995209 -147634941 - MER39 LTR ERV1 0 707 259 260 242 44 22 chr5 51995189 51995280 -147634870 - LTR48B LTR ERV1 -551 93 1 * 486 127 0 0 chr5 51995324 51995403 -147634747 + HY3 scRNA scRNA 22 100 -1 21 0 0 0 chr5 51995403 51995424 -147634726 + AT_rich Low_complexity Low_complexity 1 21 0 296 222 103 16 chr5 51995636 51995762 -147634388 - MER31-int LTR ERV1 -3490 1446 1310 2483 56 0 3 chr5 51995949 51996253 -147633897 - AluY SINE Alu -8 303 1 322 221 51 101 chr5 51996254 51996412 -147633738 - MER31-int LTR ERV1 -3714 1222 1073 656 206 70 44 chr5 51996789 51997017 -147633133 - LTR37A LTR ERV1 -1 425 192 2664 197 73 7 chr5 51997057 51997620 -147632530 + MER82 DNA MER2_type 2 601 -52 320 244 57 65 chr5 52000894 52001017 -147629133 + MIR SINE MIR 48 169 -93 4840 33 3 5 chr5 52001065 52001647 -147628503 + L1PA3 LINE L1 5575 6155 0 298 137 39 0 chr5 52001692 52001743 -147628407 + L2 LINE L2 2909 2961 -353 206 205 0 0 chr5 52001918 52001957 -147628193 - MIR SINE MIR 0 262 224 659 263 50 0 chr5 52001963 52002123 -147628027 + MIR SINE MIR 1 168 -94 183 225 183 0 chr5 52002180 52002251 -147627899 - MIR SINE MIR -39 223 140 221 320 197 6 chr5 52002863 52003041 -147627109 + L3b LINE CR1 1117 1328 -255 374 291 50 21 chr5 52003156 52003297 -147626853 - MER5A DNA MER1_type -1 188 44 210 261 0 0 chr5 52003424 52003470 -147626680 + (CATA)n Simple_repeat Simple_repeat 3 48 0 22 56 0 0 chr5 52004449 52004485 -147625665 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr5 52004650 52004674 -147625476 + AT_rich Low_complexity Low_complexity 1 24 0 581 240 6 78 chr5 52004789 52004898 -147625252 - MIR SINE MIR -76 186 93 1439 168 6 102 chr5 52004898 52005220 -147624930 + AluJo SINE Alu 1 291 -21 581 240 6 78 chr5 52005220 52005289 -147624861 - MIR SINE MIR -169 93 21 230 315 0 0 chr5 52005561 52005634 -147624516 + L1M3 LINE L1 5695 5767 -401 1943 244 8 47 chr5 52005847 52006249 -147623901 - L1PA4 LINE L1 0 6155 5770 7216 41 21 2 chr5 52006252 52007524 -147622626 - L1PA3 LINE L1 0 6155 4873 12572 35 1 0 chr5 52007526 52009109 -147621041 + L1PA3 LINE L1 3301 4885 -1261 25 0 0 0 chr5 52009214 52009239 -147620911 + AT_rich Low_complexity Low_complexity 1 25 0 6054 88 35 5 chr5 52009399 52010574 -147619576 + L1PA11 LINE L1 4954 6174 0 738 153 15 15 chr5 52010637 52010768 -147619382 + FLAM_C SINE Alu 2 132 -1 5395 168 77 24 chr5 52010776 52010867 -147619283 + L1 LINE L1 2835 2920 -3226 1608 150 13 85 chr5 52010867 52011173 -147618977 + AluJb SINE Alu 2 285 -27 5395 168 77 24 chr5 52011173 52012387 -147617763 + L1 LINE L1 2920 4209 -1937 4704 109 89 34 chr5 52012458 52013429 -147616721 - Tigger3b DNA MER2_type 0 1231 208 271 127 32 0 chr5 52013431 52013494 -147616656 + (TA)n Simple_repeat Simple_repeat 1 65 0 1270 143 0 62 chr5 52013500 52013724 -147616426 + AluSx SINE Alu 64 273 -39 199 104 42 0 chr5 52013827 52013875 -147616275 + (TA)n Simple_repeat Simple_repeat 1 50 0 1947 137 0 42 chr5 52013876 52014182 -147615968 - AluSx SINE Alu -19 293 1 1017 216 39 0 chr5 52014182 52014386 -147615764 - Tigger3b DNA MER2_type -1019 212 1 694 188 11 65 chr5 52014401 52014677 -147615473 + L1 LINE L1 4239 4499 -1647 2537 206 36 21 chr5 52014741 52015461 -147614689 + L1MA9 LINE L1 2478 3208 -4358 1130 186 45 5 chr5 52015789 52016010 -147614140 + MSTB LTR MaLR 197 426 0 6243 245 85 20 chr5 52016013 52017350 -147612800 + L1MA9 LINE L1 3537 4786 -2945 2254 123 7 0 chr5 52017350 52017658 -147612492 + AluSx SINE Alu 1 310 -2 6243 245 85 20 chr5 52017658 52020219 -147609931 + L1MA9 LINE L1 4786 7710 -21 1737 123 74 0 chr5 52020283 52020607 -147609543 + L1MA8 LINE L1 5938 6285 -6 6865 59 8 1 chr5 52020607 52022016 -147608134 - L1PA6 LINE L1 -5 6149 4745 25 0 0 0 chr5 52023184 52023209 -147606941 + AT_rich Low_complexity Low_complexity 1 25 0 509 176 0 70 chr5 52023216 52023358 -147606792 - FRAM SINE Alu -8 168 37 16613 64 9 5 chr5 52025025 52027992 -147602158 - L1PA6 LINE L1 -139 6015 3041 30942 91 15 11 chr5 52028093 52032752 -147597398 - L1P LINE L1 -1458 4688 12 550 288 70 19 chr5 52032792 52033007 -147597143 + MLT1A2 LTR MaLR 100 325 -49 20352 181 41 29 chr5 52033201 52039590 -147590560 - L1PA11 LINE L1 -4 6485 1 532 168 32 0 chr5 52039633 52039728 -147590422 + MSTA LTR MaLR 9 106 -322 4790 111 48 82 chr5 52040240 52041980 -147588170 + L1PA16 LINE L1 4428 6157 -9 30 27 0 0 chr5 52041980 52042017 -147588133 + AT_rich Low_complexity Low_complexity 1 37 0 27028 127 14 57 chr5 52042143 52048611 -147581539 + L1PA8 LINE L1 2 6187 0 1280 249 130 15 chr5 52048636 52049175 -147580975 - L1MC4 LINE L1 -316 7726 7126 1474 202 102 41 chr5 52050052 52050637 -147579513 + MER39 LTR ERV1 7 691 -16 7929 120 5 30 chr5 52050637 52051953 -147578197 + HSMAR1 DNA Mariner 1 1283 -4 1474 202 102 41 chr5 52051953 52051971 -147578179 + MER39 LTR ERV1 691 706 -1 1266 220 83 17 chr5 52052077 52052427 -147577723 - MLT1D LTR MaLR 0 505 133 737 167 9 0 chr5 52052583 52052697 -147577453 + FLAM_C SINE Alu 1 115 -18 207 196 0 22 chr5 52053117 52053163 -147576987 - L2 LINE L2 -6 3307 3263 1476 140 61 25 chr5 52053366 52053644 -147576506 + MER21A LTR ERV1 21 308 -623 1828 140 159 11 chr5 52053649 52054021 -147576129 + MSTA LTR MaLR 1 427 -1 2462 184 60 67 chr5 52054021 52054652 -147575498 + MER21A LTR ERV1 303 929 -2 1546 138 161 0 chr5 52055483 52055743 -147574407 + AluJb SINE Alu 1 302 0 23 68 0 0 chr5 52056019 52056063 -147574087 + AT_rich Low_complexity Low_complexity 1 44 0 293 233 0 0 chr5 52056075 52056135 -147574015 - Charlie1 DNA MER1_type -4 2757 2698 768 275 29 43 chr5 52056149 52056523 -147573627 + L1MCb LINE L1 3 371 -5674 547 156 0 0 chr5 52056527 52056623 -147573527 + L1MB2 LINE L1 6038 6133 -38 1582 161 8 4 chr5 52056623 52056872 -147573278 + AluSx SINE Alu 1 250 -62 824 250 95 60 chr5 52057025 52057435 -147572715 + L1MC4a LINE L1 4405 4844 -1302 2340 130 71 22 chr5 52057435 52057843 -147572307 + MSTA LTR MaLR 1 428 0 824 250 95 60 chr5 52057843 52058020 -147572130 + L1MC4a LINE L1 4844 5013 -1133 222 174 0 0 chr5 52058026 52058072 -147572078 + GA-rich Low_complexity Low_complexity 1 46 0 2462 260 59 97 chr5 52058163 52060243 -147569907 + L1MC4a LINE L1 5099 7108 -700 746 264 38 64 chr5 52060268 52060613 -147569537 + L1MEc LINE L1 13 348 -6511 1452 277 66 18 chr5 52060799 52061884 -147568266 + L1MEc LINE L1 749 1935 -4953 * 9324 91 15 2 chr5 52061883 52063293 -147566857 - L1PA7 LINE L1 -844 5302 3875 6139 67 32 5 chr5 52063293 52064096 -147566054 + L1PA7 LINE L1 5313 6143 -11 1593 202 49 15 chr5 52064674 52065181 -147564969 + L1MEc LINE L1 1899 2429 -4529 2082 138 0 10 chr5 52065181 52065479 -147564671 + AluSx SINE Alu 10 304 -8 1593 202 49 15 chr5 52065479 52065617 -147564533 + L1MEc LINE L1 2429 2561 -4397 * 13775 198 18 30 chr5 52065607 52071289 -147558861 + L1PB3 LINE L1 686 6521 -349 264 59 0 0 chr5 52071289 52071323 -147558827 + (CA)n Simple_repeat Simple_repeat 1 34 0 13775 198 18 30 chr5 52071323 52071648 -147558502 + L1PB3 LINE L1 6521 6848 -22 21 0 0 0 chr5 52071668 52071689 -147558461 + AT_rich Low_complexity Low_complexity 1 21 0 1158 226 113 24 chr5 52073167 52073716 -147556434 + L1M1 LINE L1 3032 3629 -3936 5174 202 78 6 chr5 52073738 52075158 -147554992 + L1M1 LINE L1 3735 5256 -2309 1022 240 5 0 chr5 52075159 52075363 -147554787 - AluJo SINE Alu -107 205 1 3197 222 44 45 chr5 52075390 52076649 -147553501 + L1MEc LINE L1 2664 3897 -3060 583 219 31 12 chr5 52076662 52076822 -147553328 + L1MB7 LINE L1 6008 6170 -14 573 235 53 16 chr5 52076834 52077021 -147553129 + L1MC4 LINE L1 7195 7388 -654 7294 148 57 29 chr5 52077030 52078497 -147551653 + L1PA6 LINE L1 11 1519 -4627 5100 125 24 33 chr5 52078497 52079486 -147550664 - MER11C LTR ERVK 0 1071 1 26685 74 4 7 chr5 52079487 52082305 -147547845 + L1PA6 LINE L1 1515 4311 -1843 2173 116 7 13 chr5 52082305 52082615 -147547535 + AluY SINE Alu 1 308 -3 26685 74 4 7 chr5 52082615 52084450 -147545700 + L1PA6 LINE L1 4311 6151 -3 1888 104 4 0 chr5 52084760 52085010 -147545140 - AluSg SINE Alu -14 296 46 793 193 14 7 chr5 52085011 52085151 -147544999 + AluJb SINE Alu 153 293 -19 489 258 0 25 chr5 52085186 52085306 -147544844 + L2 LINE L2 3197 3313 0 215 219 0 0 chr5 52085826 52085867 -147544283 + MIR3 SINE MIR 120 160 -48 2338 182 20 61 chr5 52085925 52086449 -147543701 - MLT2B3 LTR ERVL -9 545 44 1538 152 164 0 chr5 52086449 52086772 -147543378 - MSTA LTR MaLR 0 428 53 300 82 20 0 chr5 52086800 52086849 -147543301 - MLT2B3 LTR ERVL -504 50 1 288 143 71 0 chr5 52086863 52086919 -147543231 + Charlie8 DNA MER1_type 72 131 -2286 386 220 121 0 chr5 52087242 52087333 -147542817 - MER5A DNA MER1_type -77 112 11 537 289 13 19 chr5 52087379 52087538 -147542612 - MER5B DNA MER1_type -20 158 1 2141 118 10 3 chr5 52087543 52087847 -147542303 + AluSc SINE Alu 1 306 -3 342 322 91 0 chr5 52089447 52089568 -147540582 - L2 LINE L2 -9 3263 3132 684 285 52 25 chr5 52089684 52090052 -147540098 - HAL1b LINE L1 -641 707 330 242 114 0 0 chr5 52090196 52090231 -147539919 - U2 snRNA snRNA -153 35 1 208 230 50 100 chr5 52090750 52090850 -147539300 - MER5A DNA MER1_type -23 166 72 236 259 17 0 chr5 52093149 52093207 -147536943 + L2 LINE L2 3255 3313 0 664 236 149 0 chr5 52093654 52093815 -147536335 + MER5A DNA MER1_type 4 188 -1 470 168 62 62 chr5 52093816 52093929 -147536221 - MER5A DNA MER1_type -68 121 9 216 97 0 0 chr5 52093979 52094010 -147536140 + (CCA)n Simple_repeat Simple_repeat 2 32 0 463 288 59 29 chr5 52094070 52094240 -147535910 - MER5B DNA MER1_type -3 175 1 447 19 0 0 chr5 52097212 52097264 -147532886 + (CA)n Simple_repeat Simple_repeat 2 53 0 229 297 14 0 chr5 52097788 52097862 -147532288 + MLT1K LTR MaLR 168 242 -346 1662 184 34 0 chr5 52098560 52098854 -147531296 + AluJo SINE Alu 1 304 -8 324 120 0 0 chr5 52100390 52100440 -147529710 + (TG)n Simple_repeat Simple_repeat 2 51 0 3447 160 18 0 chr5 52101193 52101806 -147528344 + L1MB2 LINE L1 5546 6169 -2 297 333 124 0 chr5 52104404 52104581 -147525569 - MIR SINE MIR 0 262 64 502 291 111 0 chr5 52105051 52105223 -147524927 + MIR SINE MIR 72 262 0 1138 120 83 46 chr5 52105307 52105524 -147524626 - THE1B LTR MaLR -2 362 138 1041 153 11 11 chr5 52105524 52105707 -147524443 + L1MC1 LINE L1 6150 6332 -1 2291 85 7 14 chr5 52105866 52106160 -147523990 + AluY SINE Alu 1 292 -19 27 29 0 0 chr5 52106173 52106207 -147523943 + AT_rich Low_complexity Low_complexity 1 34 0 669 225 0 23 chr5 52106294 52106423 -147523727 - FLAM_A SINE Alu -7 126 1 2662 188 87 101 chr5 52106576 52106793 -147523357 + L1MC5 LINE L1 6613 6832 -1129 2157 200 29 4 chr5 52106793 52107249 -147522901 + MLT1C LTR MaLR 1 467 0 2662 188 87 101 chr5 52107249 52107388 -147522762 + L1MC5 LINE L1 6832 6971 -990 2339 106 0 3 chr5 52107388 52107699 -147522451 - AluSg SINE Alu 0 310 1 2662 188 87 101 chr5 52107699 52107717 -147522433 + L1MC5 LINE L1 6971 6988 -973 2036 117 0 3 chr5 52107717 52108027 -147522123 - AluSg SINE Alu 0 309 1 2662 188 87 101 chr5 52108027 52108226 -147521924 + L1MC5 LINE L1 6988 7188 -773 2507 80 6 0 chr5 52108226 52108537 -147521613 + AluSq SINE Alu 1 313 0 2662 188 87 101 chr5 52108537 52109291 -147520859 + L1MC5 LINE L1 7188 7925 -36 2227 89 0 51 chr5 52109329 52109644 -147520506 + AluSg SINE Alu 1 299 -11 3116 200 49 50 chr5 52110931 52112126 -147518024 + L1ME1 LINE L1 4973 6161 -5 237 154 0 0 chr5 52112272 52112311 -147517839 + Alu SINE Alu 131 169 -134 6035 104 226 87 chr5 52112311 52113800 -147516350 + pTR5 LTR ERV1 743 2438 0 673 146 0 9 chr5 52113803 52113913 -147516237 + AluJo SINE Alu 31 139 -173 236 167 0 19 chr5 52113913 52113967 -147516183 + L1MCa LINE L1 65 117 -6309 * 12776 199 32 31 chr5 52113965 52115694 -147514456 + L1M2 LINE L1 414 2139 -4874 2207 128 0 0 chr5 52115694 52115999 -147514151 + AluSg SINE Alu 1 305 -5 12776 199 32 31 chr5 52115999 52118757 -147511393 + L1M2 LINE L1 2139 5201 -1812 207 0 0 0 chr5 52118757 52118780 -147511370 + (TAA)n Simple_repeat Simple_repeat 2 24 0 12776 199 32 31 chr5 52118780 52119988 -147510162 + L1M2 LINE L1 5201 6406 -607 715 153 80 7 chr5 52119999 52120136 -147510014 - L1MCa LINE L1 -5757 669 523 4536 199 84 13 chr5 52120140 52120385 -147509765 + L1MCa LINE L1 1352 1578 -4848 252 0 0 0 chr5 52120385 52120413 -147509737 + (CA)n Simple_repeat Simple_repeat 2 29 0 4536 199 84 13 chr5 52120413 52121875 -147508275 + L1MCa LINE L1 1578 3287 -3139 7376 37 1 2 chr5 52121875 52122876 -147507274 + L1PA3 LINE L1 5153 6152 -3 4536 199 84 13 chr5 52122876 52123582 -147506568 + L1MCa LINE L1 3287 3941 -2485 225 0 0 0 chr5 52123582 52123607 -147506543 + (TTTTTA)n Simple_repeat Simple_repeat 4 28 0 16723 70 12 1 chr5 52123937 52126991 -147503159 - L1PA6 LINE L1 -4 6150 3075 4263 130 7 9 chr5 52127091 52127782 -147502368 + HSMAR1 DNA Mariner 594 1283 -4 1289 217 83 17 chr5 52127906 52128256 -147501894 - MLT1D LTR MaLR 0 505 133 739 183 0 0 chr5 52128412 52128527 -147501623 + FLAM_C SINE Alu 1 115 -18 12692 78 7 2 chr5 52128892 52130746 -147499404 - L1P LINE L1 -2206 3940 2078 15519 58 3 3 chr5 52130846 52133627 -147496523 + L1PA6 LINE L1 3358 6151 -3 1888 104 4 0 chr5 52133937 52134187 -147495963 - AluSg SINE Alu -14 296 46 793 193 14 7 chr5 52134188 52134328 -147495822 + AluJb SINE Alu 153 293 -19 489 258 0 25 chr5 52134363 52134483 -147495667 + L2 LINE L2 3197 3313 0 215 219 0 0 chr5 52135003 52135044 -147495106 + MIR3 SINE MIR 120 160 -48 1058 133 5 92 chr5 52135102 52135320 -147494830 - MLT2B2 LTR ERVL -9 506 308 10436 72 9 0 chr5 52135427 52135800 -147494350 + L1PA6 LINE L1 3961 4329 -1825 2038 123 10 16 chr5 52135800 52136109 -147494041 + AluY SINE Alu 1 307 -4 10436 72 9 0 chr5 52136109 52137920 -147492230 + L1PA6 LINE L1 4329 6147 -7 604 274 98 14 chr5 52138004 52138373 -147491777 + L1MC4 LINE L1 7501 7900 -142 709 201 34 7 chr5 52138549 52138698 -147491452 - Charlie1a DNA MER1_type -1286 169 17 220 357 114 14 chr5 52138729 52138869 -147491281 + L3b LINE CR1 1294 1447 -136 227 114 0 0 chr5 52139019 52139054 -147491096 - L1MC5 LINE L1 -187 7774 7740 1106 142 30 0 chr5 52139193 52139362 -147490788 - FRAM SINE Alu -3 173 1 2108 117 3 19 chr5 52139491 52139798 -147490352 - AluSx SINE Alu -6 306 5 2197 119 10 3 chr5 52139827 52140130 -147490020 - AluSg SINE Alu -5 305 1 644 248 184 5 chr5 52142013 52142231 -147487919 - MIR SINE MIR 0 262 6 7171 51 2 1 chr5 52142336 52143924 -147486226 + L1PA6 LINE L1 4557 6153 -1 734 225 159 40 chr5 52143980 52144331 -147485819 + L1ME2 LINE L1 5753 6145 -19 924 176 112 45 chr5 52144386 52144699 -147485451 + MER46C DNA MER2_type 4 337 -1 260 319 17 76 chr5 52144792 52144854 -147485296 - MIR SINE MIR -126 136 83 2066 179 56 12 chr5 52144854 52145262 -147484888 - MSTB LTR MaLR 0 426 1 260 319 17 76 chr5 52145262 52145318 -147484832 - MIR SINE MIR -179 83 25 344 300 50 0 chr5 52145709 52145809 -147484341 - MER91C DNA MER1_type -35 105 1 1876 124 69 36 chr5 52147816 52148179 -147481971 + THE1C LTR MaLR 1 375 0 1529 178 54 12 chr5 52148260 52148592 -147481558 - MLT1B LTR MaLR -1 389 44 563 294 63 23 chr5 52148592 52148813 -147481337 + MIR SINE MIR 30 259 -3 447 319 164 21 chr5 52148936 52149265 -147480885 + L1MEd LINE L1 6 381 -5738 273 75 0 0 chr5 52149418 52149458 -147480692 + (CA)n Simple_repeat Simple_repeat 1 40 0 301 242 38 118 chr5 52149469 52150012 -147480138 + L1MEd LINE L1 676 1166 -4953 1942 150 3 0 chr5 52150012 52150299 -147479851 - AluSx SINE Alu -24 288 1 301 242 38 118 chr5 52150299 52150367 -147479783 + L1MEd LINE L1 1166 1238 -4881 475 298 114 55 chr5 52150374 52150686 -147479464 + L1MEd LINE L1 1240 1687 -803 5865 230 54 36 chr5 52151112 52153102 -147477048 + L1M3e LINE L1 1 1955 -5151 2287 107 0 0 chr5 52153102 52153400 -147476750 + AluSx SINE Alu 3 300 -12 5865 230 54 36 chr5 52153400 52155428 -147474722 + L1M3e LINE L1 1955 4745 -2361 1665 117 5 0 chr5 52155435 52155657 -147474493 + AluSx SINE Alu 3 225 -87 1098 203 0 5 chr5 52155657 52155879 -147474271 + L1M3e LINE L1 5043 5263 -1843 1112 191 23 16 chr5 52155885 52156141 -147474009 + L1MD3 LINE L1 7730 7987 -8 444 195 32 110 chr5 52157297 52157451 -147472699 + MIR SINE MIR 116 257 -5 397 219 130 24 chr5 52158472 52158595 -147471555 - LTR67 LTR ERVL -21 536 401 676 282 129 28 chr5 52158629 52158877 -147471273 - LTR67 LTR ERVL -280 277 5 2238 104 0 0 chr5 52160543 52160830 -147469320 - AluSq SINE Alu -26 287 1 345 43 85 0 chr5 52162727 52162774 -147467376 - MADE1 DNA Mariner 0 80 30 312 27 0 0 chr5 52163637 52163674 -147466476 + (TG)n Simple_repeat Simple_repeat 1 37 0 229 279 0 38 chr5 52164217 52164296 -147465854 + CT-rich Low_complexity Low_complexity 1 76 0 21 0 0 0 chr5 52165067 52165088 -147465062 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr5 52165208 52165228 -147464922 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4350 131 7 47 chr5 52166297 52167017 -147463133 + LTR8 LTR ERV1 1 691 0 450 266 62 0 chr5 52167988 52168116 -147462034 - L2 LINE L2 0 3313 3178 309 326 56 75 chr5 52168245 52168536 -147461614 - L2 LINE L2 -356 2958 2676 7326 44 7 0 chr5 52168536 52169997 -147460153 + L1PA5 LINE L1 4689 6154 0 309 326 56 75 chr5 52169997 52170119 -147460031 - L2 LINE L2 -638 2676 2553 2208 112 27 0 chr5 52170421 52170717 -147459433 + AluSg SINE Alu 1 304 -6 2055 159 0 0 chr5 52171094 52171403 -147458747 + AluSx SINE Alu 1 309 -3 2043 142 0 3 chr5 52171502 52171798 -147458352 + AluJo SINE Alu 11 305 -7 1650 156 55 47 chr5 52172890 52173255 -147456895 + L1MB8 LINE L1 5811 6178 0 214 313 146 28 chr5 52173467 52173611 -147456539 + MIR SINE MIR 90 250 -12 981 304 139 5 chr5 52173631 52174019 -147456131 - MLT1K LTR MaLR 0 588 149 2278 98 56 34 chr5 52174037 52174393 -147455757 - THE1B LTR MaLR 0 364 1 189 0 0 0 chr5 52175023 52175044 -147455106 + (T)n Simple_repeat Simple_repeat 1 21 0 642 188 64 40 chr5 52175374 52175576 -147454574 + L2 LINE L2 3107 3313 0 1298 302 65 38 chr5 52177134 52177716 -147452434 - MLT1L LTR MaLR -17 598 1 2176 119 10 10 chr5 52177810 52178112 -147452038 + AluSx SINE Alu 1 302 -10 2924 10 0 0 chr5 52178222 52178532 -147451618 - AluY SINE Alu 0 311 2 233 287 129 30 chr5 52178630 52178731 -147451419 - L2 LINE L2 -9 3263 3153 21702 103 28 16 chr5 52179411 52182577 -147447573 + L1P LINE L1 11 3217 -2929 1217 90 0 11 chr5 52182577 52182786 -147447364 - L1PA4 LINE L1 0 6155 5981 21702 103 28 16 chr5 52182786 52182839 -147447311 + L1P LINE L1 3217 3268 -2878 * 23974 96 20 6 chr5 52182836 52185998 -147444152 + L1P LINE L1 7 3217 -2929 1235 85 0 11 chr5 52185998 52186207 -147443943 - L1PA4 LINE L1 0 6155 5981 23974 96 20 6 chr5 52186207 52186260 -147443890 + L1P LINE L1 3217 3268 -2878 * 30940 46 5 108 chr5 52186257 52190966 -147439184 + L1P LINE L1 7 4227 -1919 24101 98 13 19 chr5 52191066 52191733 -147438417 - L1P LINE L1 -2657 3489 2819 2480 90 0 0 chr5 52191733 52192043 -147438107 - AluY SINE Alu -1 310 1 24101 98 13 19 chr5 52192043 52194876 -147435274 - L1P LINE L1 -3327 2819 11 4762 204 81 7 chr5 52194886 52196055 -147434095 + L1M4 LINE L1 3651 4906 -1240 634 224 63 0 chr5 52196104 52196247 -147433903 - MLT1K LTR MaLR -351 154 3 1944 221 50 62 chr5 52196364 52196925 -147433225 - MLT2B3 LTR ERVL 0 554 1 2281 161 39 25 chr5 52196940 52197201 -147432949 - MER39 LTR ERV1 0 707 436 2349 98 0 3 chr5 52197201 52197508 -147432642 + AluSg SINE Alu 1 306 -4 2281 161 39 25 chr5 52197508 52197688 -147432462 - MER39 LTR ERV1 -271 436 260 246 244 44 56 chr5 52197674 52197764 -147432386 - LTR48B LTR ERV1 -555 89 1 * 1714 171 113 0 chr5 52197999 52198291 -147431859 - MER1B DNA MER1_type 0 339 15 2533 200 71 71 chr5 52198462 52199092 -147431058 + MER45B DNA AcHobo 1 630 -410 1460 224 71 19 chr5 52200684 52201063 -147429087 + MER45B DNA AcHobo 641 1039 -1 2348 132 44 10 chr5 52201237 52201645 -147428505 - L1MB2 LINE L1 0 6171 5750 2241 110 0 0 chr5 52201922 52202214 -147427936 - AluSx SINE Alu -20 292 1 181 256 64 77 chr5 52202534 52202612 -147427538 + MIR SINE MIR 13 89 -173 274 235 59 0 chr5 52202680 52202748 -147427402 - L2 LINE L2 0 3313 3242 210 316 51 25 chr5 52202784 52202863 -147427287 + MIR SINE MIR 40 120 -88 2306 86 26 7 chr5 52202912 52203215 -147426935 + AluY SINE Alu 1 309 -2 264 355 91 16 chr5 52203226 52203468 -147426682 - MLT1I LTR MaLR -35 374 115 221 291 47 0 chr5 52203549 52203635 -147426515 + MIR3 SINE MIR 118 207 -1 2133 135 0 0 chr5 52203769 52204073 -147426077 - AluSq SINE Alu -9 304 1 2074 114 0 17 chr5 52204383 52204705 -147425445 - AluSg SINE Alu 0 317 1 2451 88 0 0 chr5 52204719 52205027 -147425123 - AluY SINE Alu -2 309 2 2507 84 3 0 chr5 52205157 52205466 -147424684 - AluSp SINE Alu -3 310 1 310 340 76 0 chr5 52205586 52205730 -147424420 - MIR SINE MIR -16 246 92 195 42 0 0 chr5 52207634 52207658 -147422492 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2418 70 0 17 chr5 52207959 52208259 -147421891 + AluSx SINE Alu 1 295 -17 305 258 75 0 chr5 52208655 52208748 -147421402 + MIR SINE MIR 3 102 -160 187 224 121 17 chr5 52208799 52208857 -147421293 + MIR SINE MIR 159 222 -40 1350 135 86 40 chr5 52209699 52210002 -147420148 - MER33 DNA MER1_type -7 317 1 518 246 59 32 chr5 52210737 52210957 -147419193 - Charlie2 DNA MER1_type -2545 237 12 539 221 17 93 chr5 52211312 52211484 -147418666 - MER5A DNA MER1_type -26 163 5 518 272 29 102 chr5 52212155 52212284 -147417866 - MIR SINE MIR -2 260 156 1943 128 14 17 chr5 52212284 52212573 -147417577 + AluSx SINE Alu 1 288 -24 518 272 29 102 chr5 52212573 52212689 -147417461 - MIR SINE MIR -106 156 33 4270 196 64 26 chr5 52212709 52213059 -147417091 - MER45B DNA AcHobo -541 1040 705 2103 131 10 0 chr5 52213059 52213365 -147416785 - AluSx SINE Alu -3 309 1 4270 196 64 26 chr5 52213365 52213983 -147416167 - MER45B DNA AcHobo -876 705 30 1835 130 58 36 chr5 52213983 52214313 -147415837 - MER1B DNA MER1_type 0 337 1 4270 196 64 26 chr5 52214313 52214345 -147415805 - MER45B DNA AcHobo -1551 30 1 2106 112 0 23 chr5 52215350 52215653 -147414497 + AluSg SINE Alu 1 296 -14 485 269 18 18 chr5 52215852 52216019 -147414131 + L1ME4a LINE L1 5535 5701 -420 302 222 140 37 chr5 52216079 52216169 -147413981 + L1ME4a LINE L1 5803 5882 -239 2270 84 3 3 chr5 52216169 52216465 -147413685 + AluY SINE Alu 1 296 -15 302 222 140 37 chr5 52216465 52216631 -147413519 + L1ME4a LINE L1 5882 6112 -9 300 228 0 0 chr5 52216951 52217008 -147413142 + L2 LINE L2 3216 3272 0 738 339 29 0 chr5 52217265 52217507 -147412643 - MIR SINE MIR -9 253 5 419 224 144 25 chr5 52217600 52217880 -147412270 - L1ME LINE L1 -667 5495 5175 1722 210 57 67 chr5 52218003 52218688 -147411462 - L1MC5 LINE L1 -103 7858 7181 334 175 31 51 chr5 52218776 52218876 -147411274 + FLAM_A SINE Alu 38 126 -7 2083 90 32 39 chr5 52218892 52219204 -147410946 + AluY SINE Alu 1 310 -1 2092 101 20 3 chr5 52219221 52219517 -147410633 + AluSg SINE Alu 5 305 -5 290 279 154 0 chr5 52220552 52220656 -147409494 + L2 LINE L2 3194 3313 0 2761 0 0 0 chr5 52221159 52221455 -147408695 + AluYa5 SINE Alu 1 296 -15 216 308 0 0 chr5 52223466 52223531 -147406619 + CT-rich Low_complexity Low_complexity 4 68 0 195 42 0 0 chr5 52223808 52223832 -147406318 + (T)n Simple_repeat Simple_repeat 1 24 0 192 97 0 0 chr5 52224405 52224436 -147405714 + (CCCA)n Simple_repeat Simple_repeat 1 31 0 31 26 0 0 chr5 52225724 52225762 -147404388 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5 52226119 52226149 -147404001 + AT_rich Low_complexity Low_complexity 1 30 0 1739 189 0 19 chr5 52228312 52228630 -147401520 - AluJb SINE Alu 0 312 1 31 0 0 0 chr5 52229169 52229200 -147400950 + AT_rich Low_complexity Low_complexity 1 31 0 2150 126 3 3 chr5 52229857 52230159 -147399991 - AluSq SINE Alu -11 302 1 509 294 61 29 chr5 52231309 52231588 -147398562 - MER20B DNA MER1_type -495 288 1 1858 162 3 20 chr5 52232648 52232951 -147397199 - AluJo SINE Alu -14 298 1 630 236 23 51 chr5 52233181 52233371 -147396779 - MER63A DNA MER1_type -1478 210 24 2349 42 0 7 chr5 52233371 52233682 -147396468 + AluY SINE Alu 1 309 0 630 236 23 51 chr5 52233682 52233706 -147396444 - MER63A DNA MER1_type -1664 24 1 23 0 0 0 chr5 52234545 52234568 -147395582 + AT_rich Low_complexity Low_complexity 1 23 0 885 193 6 6 chr5 52234992 52235163 -147394987 + MER58B DNA MER1_type 171 341 0 1993 138 3 0 chr5 52236083 52236372 -147393778 - AluSx SINE Alu -22 290 1 2309 87 0 13 chr5 52236522 52236834 -147393316 - AluY SINE Alu -3 308 1 2655 179 47 0 chr5 52237129 52237660 -147392490 - L1MB7 LINE L1 -27 6157 5602 1748 203 38 118 chr5 52237655 52237849 -147392301 - L1MB7 LINE L1 -2214 3932 3724 * 2342 117 71 17 chr5 52237849 52238258 -147391892 - Tigger2a DNA MER2_type 0 434 4 1748 203 38 118 chr5 52238258 52238710 -147391440 - L1MB7 LINE L1 -2422 3724 3237 1740 157 0 29 chr5 52238710 52238990 -147391160 - AluJb SINE Alu -40 272 1 1748 203 38 118 chr5 52238990 52239101 -147391049 - L1MB7 LINE L1 -2909 3237 3260 2360 109 0 3 chr5 52239101 52239414 -147390736 + AluSx SINE Alu 1 312 0 1748 203 38 118 chr5 52239414 52239593 -147390557 - L1MB7 LINE L1 -2885 3261 3069 266 244 0 24 chr5 52240092 52240174 -147389976 - MLT1K LTR MaLR -20 568 489 21 36 0 0 chr5 52240409 52240437 -147389713 + AT_rich Low_complexity Low_complexity 1 28 0 220 278 56 0 chr5 52241878 52241950 -147388200 + L3b LINE CR1 1505 1580 -3 893 156 4 140 chr5 52243337 52243587 -147386563 + MER20 DNA MER1_type 4 219 0 405 240 96 7 chr5 52243885 52244031 -147386119 - L2 LINE L2 -43 3270 3112 23 0 0 0 chr5 52244740 52244763 -147385387 + AT_rich Low_complexity Low_complexity 1 23 0 2107 106 40 3 chr5 52244763 52245064 -147385086 - AluSq SINE Alu -1 312 1 23 0 0 0 chr5 52245314 52245337 -147384813 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr5 52245437 52245469 -147384681 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr5 52247493 52247521 -147382629 + (TA)n Simple_repeat Simple_repeat 2 29 0 2440 75 3 0 chr5 52247521 52247828 -147382322 - AluY SINE Alu -3 308 1 1008 130 160 30 chr5 52248069 52248300 -147381850 + MER44D DNA MER2_type 1 531 -78 1489 188 72 6 chr5 52248302 52248621 -147381529 - MER2 DNA MER2_type -5 340 1 448 176 0 0 chr5 52248624 52248698 -147381452 + MER44D DNA MER2_type 526 599 -6 21 36 0 0 chr5 52249423 52249451 -147380699 + AT_rich Low_complexity Low_complexity 1 28 0 2309 100 3 0 chr5 52249457 52249766 -147380384 + AluSp SINE Alu 1 310 -3 202 227 0 0 chr5 52249857 52249901 -147380249 + L2 LINE L2 3267 3310 -3 892 45 0 0 chr5 52250554 52250665 -147379485 + L1PA5 LINE L1 6040 6150 -4 504 0 0 0 chr5 52250666 52250722 -147379428 + (TA)n Simple_repeat Simple_repeat 1 56 0 273 209 0 0 chr5 52251395 52251462 -147378688 + CT-rich Low_complexity Low_complexity 1 67 0 1624 113 8 0 chr5 52251592 52251830 -147378320 - L1PB1 LINE L1 -4 6147 5908 628 143 31 0 chr5 52252074 52252172 -147377978 - U6 snRNA snRNA -6 101 1 439 246 18 9 chr5 52252196 52252310 -147377840 - MIR SINE MIR -58 204 90 641 259 84 40 chr5 52252815 52253066 -147377084 - L2 LINE L2 0 3313 3052 1598 196 3 13 chr5 52253066 52253367 -147376783 + AluJb SINE Alu 1 298 -14 736 244 5 80 chr5 52253540 52253753 -147376397 + MIR SINE MIR 33 229 -33 195 69 0 0 chr5 52254185 52254214 -147375936 + (CA)n Simple_repeat Simple_repeat 1 29 0 206 170 38 38 chr5 52254496 52254549 -147375601 + CT-rich Low_complexity Low_complexity 5 57 0 2256 121 7 0 chr5 52254802 52255158 -147374992 - AluSx SINE Alu 0 358 1 209 343 169 23 chr5 52255310 52255482 -147374668 - L2 LINE L2 -1 3271 3075 1306 188 90 24 chr5 52255982 52256237 -147373913 - AluJo SINE Alu -40 272 1 978 134 32 48 chr5 52256376 52256563 -147373587 + L1PA15 LINE L1 5969 6152 -13 216 0 0 0 chr5 52258229 52258253 -147371897 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1693 155 4 25 chr5 52258253 52258531 -147371619 - AluJo SINE Alu -32 280 9 198 270 56 79 chr5 52259756 52259845 -147370305 - MIR SINE MIR -6 256 170 321 308 82 36 chr5 52259912 52260107 -147370043 + MIR SINE MIR 58 261 -1 815 136 0 16 chr5 52260574 52260699 -147369451 + FLAM_C SINE Alu 4 126 -17 342 0 0 0 chr5 52260699 52260737 -147369413 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 182 237 0 0 chr5 52260749 52260787 -147369363 - MIR SINE MIR -25 237 200 539 251 127 59 chr5 52260814 52261121 -147369029 + MLT1J2 LTR MaLR 39 366 -84 513 316 32 11 chr5 52261191 52261378 -147368772 - MIR SINE MIR -71 191 1 1678 124 4 0 chr5 52261585 52261838 -147368312 + AluSx SINE Alu 48 301 0 184 264 218 35 chr5 52262283 52262370 -147367780 - L2 LINE L2 -1 3271 3169 1266 59 0 0 chr5 52263762 52263939 -147366211 + AluY SINE Alu 132 308 0 474 244 195 18 chr5 52264511 52264675 -147365475 - MIR3 SINE MIR -15 193 1 1839 169 3 3 chr5 52265249 52265544 -147364606 - AluJb SINE Alu -17 295 1 1721 196 0 16 chr5 52265568 52265885 -147364265 + AluJo SINE Alu 1 312 0 255 61 0 0 chr5 52266034 52266067 -147364083 + (T)n Simple_repeat Simple_repeat 1 33 0