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  Chromosome 16 - Genetic Maps - Single Contig
 

Chromosome 16 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033286 NT_033283 NT_010384 NT_031905 NT_033285 NT_010419 NT_010393 NT_033288
NT_033281 NT_030837 NT_010552 NT_010530 NT_024776 NT_010441 NT_010591 NT_033284
NT_010604 NT_010589 NT_024802 NT_024812 NT_024779 NT_033282 NT_024773 NT_010505
NT_010493 NT_010498 NT_034002 NT_033291 NT_010463 NT_033904 NT_034001 NT_010546
NT_033289 NT_010480 NT_031902 NT_030154 NT_010635 NT_010478 NT_010494 NT_024797
NT_010422 NT_024767 NT_033290 NT_028371 NT_024788 NT_019609 NT_033287 NT_010404
NT_010542


  NT_010478
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010478AC009033718881863AFMA342VC51688.001689.631 AC009033, AC009125
S/G/Y/R/B/O NT_010478AC009104720369293        
S/G/Y/R/B/O NT_010478AC092114721367083        
S/G/Y/R/B/O NT_010478AC092344721708373        
S/G/Y/R/B/O NT_010478AC087565722957613        
S/G/Y/R/B/O NT_010478AC092128725698693UT1684  1687.881AC004605, AC004605
S/G/Y/R/B/O NT_010478AC004605726260173AFM320WF11688.101689.631 AC004605, AC080184
S/G/Y/R/B/O NT_010478AC004605727309313AFMA109YA51688.801690.651AC009120, AC004605, AC009120, AC010257, AC080184
S/G/Y/R/B/O NT_010478AC009120727990083        
S/G/Y/R/B/O NT_010478AC009053729181413        
S/G/Y/R/B/O NT_010478AC009153730884863AFMC020WE91690.401692.101 AC009153
S/G/Y/R/B/O NT_010478AC109599731453141        
S/G/Y/R/B/O NT_010478AL139227731673482        
S/G/Y/R/B/O NT_010478AC074049731988961        
S/G/Y/R/B/O NT_010478AC009092732092691        
S/G/Y/R/B/O NT_010478AC004685734000483        
S/G/Y/R/B/O NT_010478AC009132735122832        
S/G/Y/R/B/O NT_010478AC092383736681832        
S/G/Y/R/B/O NT_010478AP001588736749981        
S/G/Y/R/B/O NT_010478AC009162736908493AFMA143ZD11686.601688.181AC009092, AL139227, AC009092, AC009162, AL139227
S/G/Y/R/B/O NT_010478AC099521737365723        
S/G/Y/R/B/O NT_010478AC020978738826023        
S/G/Y/R/B/O NT_010478AC004531740235443        
S/G/Y/R/B/O NT_010478AC009077742151093        
S/G/Y/R/B/O NT_010478AC040162743037873        
S/G/Y/R/B/O NT_010478AC010530745891973AFMB082YC51684.401685.941AC009095, AC009095, AC010530
S/G/Y/R/B/O NT_010478AC010530745988393AFMB347XC11684.401685.941AC009095, AC009095, AC010530
S/G/Y/R/B/O NT_010478AC009095746149011        
S/G/Y/R/B/O NT_010478AC027682746400471        
S/G/Y/R/B/O NT_010478AC020763746521152        
S/G/Y/R/B/O NT_010478AC106804748166382        
S/G/Y/R/B/O NT_010478AC012184749769111        
S/G/Y/R/B/O NT_010478AC099508750457743        
S/G/Y/R/B/O NT_010478AC009078752514303AFMA247WG51690.701692.101 AC009078
S/G/Y/R/B/O NT_010478AC009054752949473        
S/G/Y/R/B/O NT_010478AC009163754445353        
S/G/Y/R/B/O NT_010478AC025287755604573        
S/G/Y/R/B/O NT_010478AC009122757352533        
S/G/Y/R/B/O NT_010478AC105430758643563UT484  1692.101 AC105430
S/G/Y/R/B/O NT_010478AC092379759751583        
S/G/Y/R/B/O NT_010478AC099511761088123        
S/G/Y/R/B/O NT_010478AC106737762190361        
S/G/Y/R/B/O NT_010478AC010549762583171        
S/G/Y/R/B/O NT_010478AC093491762702933        
S/G/Y/R/B/O NT_010478AC009060764031753        
S/G/Y/R/B/O NT_010478AC009022765392583        
S/G/Y/R/B/O NT_010478AC026468767698693AFMB317YE51685.501687.061 AC026468
S/G/Y/R/B/O NT_010478AC092115768612961        
S/G/Y/R/B/O NT_010478AC009071768922442        
S/G/Y/R/B/O NT_010478AC009046770314983AFM072XH71690.601692.101AC010528, AC106737, AC009046, AC010528, AC084005, AC106737


  NT_010478 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010478AC010528770709233        
S/G/Y/R/B/O NT_010478AC106741771845793AFMB077ZC91690.301692.101 AC108133
S/G/Y/R/B/O NT_010478AC106741772162203AFM340YE51690.201692.101 AC106741, AC108133
S/G/Y/R/B/O NT_010478AC108125773823593AFMA083YF11692.601693.781AC104151, AC104151, AC108125
S/G/Y/R/B/O NT_010478AC104151774171233        
S/G/Y/R/B/O NT_010478AC012321775715753        
S/G/Y/R/B/O NT_010478AC009032776738803        
S/G/Y/R/B/O NT_010478AC026464778423103        
S/G/Y/R/B/O NT_010478AC026474780324952        
S/G/Y/R/B/O NT_010478AC108079780768611        
S/G/Y/R/B/O NT_010478AC009131780851313        
S/G/Y/R/B/O NT_010478AC009027782347463AFMA343ZG51684.301685.941AC009131, AC009027, AC009131
S/G/Y/R/B/O NT_010478AC009027782375563AFMA071ZG91684.401685.941AC009131, AC009027, AC009131
S/G/Y/R/B/O NT_010478AC009137783946903AFM214ZG51684.401685.941 AC009137
S/G/Y/R/B/O NT_010478AC009082784224543        
S/G/Y/R/B/O NT_010478AC099314784684313        
S/G/Y/R/B/O NT_010478AC010289786558903        
S/G/Y/R/B/O NT_010478AC010542787529733        
S/G/Y/R/B/O NT_010478AC018557789356032MFD98  1685.941 AC018557
S/G/Y/R/B/O NT_010478AC018589789022091        
S/G/Y/R/B/O NT_010478AC026397789671883        
S/G/Y/R/B/O NT_010478AC027131791125743AFMB083YF11684.401685.941AC009084, AC009084, AC027131
S/G/Y/R/B/O NT_010478AC009084792180883        
S/G/Y/R/B/O NT_010478AC074143792796101        
S/G/Y/R/B/O NT_010478AC040160794750933AFM240YH61684.401685.941 AC008594, AC040160
S/G/Y/R/B/O NT_010478AC009061795521923        
S/G/Y/R/B/O NT_010478AC009042797176731        
S/G/Y/R/B/O NT_010478 - UT2351  1687.621AC106736, AC106736
S/G/Y/R/B/O NT_010478 - GATA81D12  1687.621AC009097, AC010653, AC009097, AC010653
S/G/Y/R/B/O NT_010478 - AFM191YG71686.601688.181AC004682, AC009075, AC004682, AC009075
S/G/Y/R/B/O NT_010478 - AFMB346YF51686.601688.181AC004682, AC004682
S/G/Y/R/B/O NT_010478 - AFMA066XD51686.601688.181AC010748, AC010748
S/G/Y/R/B/O NT_010478 - AFMA183XD11688.001689.630  
S/G/Y/R/B/O NT_010478 - AFMB291ZF51690.501692.101AC092724, AC021907, AC023407, AC092724
S/G/Y/R/B/O NT_010478 - UT7223  1693.781AC106743, AC106743
S/G/Y/R/B/O NT_010478 - AFMB323XD91692.201693.781AC010548, AC010548
S/G/Y/R/B/O NT_010478 - AFMB331XH51692.301693.781AC092724, AC092724
S/G/Y/R/B/O NT_010478 - AFMA062YD51692.401693.781AC092724, AC021907, AC023407, AC092724
S/G/Y/R/B/O NT_010478 - AFMA041YB51692.501693.781AC025284, AC092724, AC021907, AC023407, AC025284, AC092724
S/G/Y/R/B/O NT_010478 - AFMA132XG91692.60  1AC009044, AC079414, AC009044, AC079414