This directory contains reciprocal-best netted chains for melGal5-hg38.
- melGal5.hg38.rbest.net.gz: melGal5-referenced recip.best net to hg38.
- melGal5.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from melGal5 to hg38 through the recip.best net.
- hg38.melGal5.rbest.net.gz: hg38-referenced recip.best net.
- hg38.melGal5.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/melGal5.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-03-06 16:11 -
hg38.melGal5.rbest.chain.gz 2017-01-19 22:07 8.1M
hg38.melGal5.rbest.net.gz 2017-01-19 22:07 14M
md5sum.txt 2017-01-19 22:07 244
melGal5.hg38.rbest.chain.gz 2017-01-19 22:07 8.1M
melGal5.hg38.rbest.net.gz 2017-01-19 22:07 14M