This directory contains reciprocal-best netted chains for mm10-panPan2.

 - mm10.panPan2.rbest.net.gz: mm10-referenced recip.best net to panPan2.
 - mm10.panPan2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from mm10 to panPan2 through the recip.best net.

 - panPan2.mm10.rbest.net.gz: panPan2-referenced recip.best net.
 - panPan2.mm10.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.mm10.panPan2.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
Parent Directory - axtRBestNet/ 2016-05-26 23:55 - md5sum.txt 2016-05-26 11:21 244 mm10.panPan2.rbest.chain.gz 2016-05-26 11:19 64M mm10.panPan2.rbest.net.gz 2016-05-26 11:21 91M panPan2.mm10.rbest.chain.gz 2016-05-26 11:17 65M panPan2.mm10.rbest.net.gz 2016-05-26 11:15 140M