This directory contains reciprocal-best netted chains for panPan2-gorGor5.
- panPan2.gorGor5.rbest.net.gz: panPan2-referenced recip.best net to gorGor5.
- panPan2.gorGor5.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from panPan2 to gorGor5 through the recip.best net.
- gorGor5.panPan2.rbest.net.gz: gorGor5-referenced recip.best net.
- gorGor5.panPan2.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/panPan2.gorGor5.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-02-01 18:10 -
gorGor5.panPan2.rbest.chain.gz 2017-02-01 16:38 17M
gorGor5.panPan2.rbest.net.gz 2017-02-01 16:37 26M
md5sum.txt 2017-02-01 16:38 256
panPan2.gorGor5.rbest.chain.gz 2017-02-01 16:38 17M
panPan2.gorGor5.rbest.net.gz 2017-02-01 16:38 34M