This directory contains reciprocal-best netted chains for panPan3-mm10.

 - panPan3-referenced net to mm10.
 - panPan3.mm10.rbest.chain.gz: chains extracted from the
   net.  These can be passed to the liftOver program to translate coords
   from panPan3 to mm10 through the net.

 - mm10-referenced net.
 - mm10.panPan3.rbest.chain.gz: "liftOver" chains.

 - axtRBestNet/panPan3.mm10.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
description of CHAIN format:
description of NET format:

      Name                        Last modified      Size  Description
Parent Directory - axtRBestNet/ 08-Jul-2020 09:54 - md5sum.txt 16-Jun-2020 13:01 244 mm10.panPan3.rbest.chain.gz 16-Jun-2020 12:59 64M 16-Jun-2020 12:58 91M panPan3.mm10.rbest.chain.gz 16-Jun-2020 13:00 65M 16-Jun-2020 13:01 139M