This directory contains reciprocal-best netted chains for hg38-colAng1. - hg38.colAng1.rbest.net.gz: hg38-referenced recip.best net to colAng1. - hg38.colAng1.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from hg38 to colAng1 through the recip.best net. - colAng1.hg38.rbest.net.gz: colAng1-referenced recip.best net. - colAng1.hg38.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/hg38.colAng1.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-02-27 18:44 - md5sum.txt 2017-02-27 14:47 244 hg38.colAng1.rbest.net.gz 2017-02-27 14:47 62M hg38.colAng1.rbest.chain.gz 2017-02-27 14:46 33M colAng1.hg38.rbest.chain.gz 2017-02-27 14:46 33M colAng1.hg38.rbest.net.gz 2017-02-27 14:45 54M