# Assembly name: PV_Mauritania_I_V1 # Organism name: Plasmodium vivax Mauritania I (malaria parasite P. vivax) # Infraspecific name: strain=Mauritania I # Taxid: 1035515 # BioSample: SAMN00710347 # BioProject: PRJNA67237 # Submitter: Broad Institute # Date: 2015-07-22 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AFNI01 # Assembly method: ALLPATHS v. R36889M # Genome coverage: 91.1x # Sequencing technology: Illumina # Excluded from RefSeq: INSDC assembly has unverified features # GenBank assembly accession: GCA_000320665.2 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000320675.2 Primary Assembly ## GCA_001182985.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name supercont1.1 unplaced-scaffold na na KQ234969.1 <> na Primary Assembly 1809 na supercont1.2 unplaced-scaffold na na KQ234970.1 <> na Primary Assembly 29302 na supercont1.3 unplaced-scaffold na na KQ234971.1 <> na Primary Assembly 826930 na supercont1.4 unplaced-scaffold na na KQ234972.1 <> na Primary Assembly 4889 na supercont1.5 unplaced-scaffold na na KQ234973.1 <> na Primary Assembly 33934 na supercont1.6 unplaced-scaffold na na KQ234974.1 <> na Primary Assembly 1157 na supercont1.7 unplaced-scaffold na na KQ234975.1 <> na Primary Assembly 288220 na supercont1.8 unplaced-scaffold na na KQ234976.1 <> na Primary Assembly 47313 na supercont1.9 unplaced-scaffold na na KQ234977.1 <> na Primary Assembly 144019 na supercont1.10 unplaced-scaffold na na KQ234978.1 <> na Primary Assembly 164384 na supercont1.11 unplaced-scaffold na na KQ234979.1 <> na Primary Assembly 12880 na supercont1.12 unplaced-scaffold na na KQ234980.1 <> na Primary Assembly 1127 na supercont1.13 unplaced-scaffold na na KQ234981.1 <> na Primary Assembly 8428 na supercont1.14 unplaced-scaffold na na KQ234982.1 <> na Primary Assembly 3542 na supercont1.15 unplaced-scaffold na na KQ234983.1 <> na Primary Assembly 1294 na supercont1.16 unplaced-scaffold na na KQ234984.1 <> na Primary Assembly 559400 na supercont1.17 unplaced-scaffold na na KQ234985.1 <> na Primary Assembly 147427 na supercont1.18 unplaced-scaffold na na KQ234986.1 <> na Primary Assembly 480296 na supercont1.19 unplaced-scaffold na na KQ234987.1 <> na Primary Assembly 1098 na supercont1.20 unplaced-scaffold na na KQ234988.1 <> na Primary Assembly 1471 na supercont1.21 unplaced-scaffold na na KQ234989.1 <> na Primary Assembly 1417 na supercont1.22 unplaced-scaffold na na KQ234990.1 <> na Primary Assembly 319393 na supercont1.23 unplaced-scaffold na na KQ234991.1 <> na Primary Assembly 1219 na supercont1.24 unplaced-scaffold na na KQ234992.1 <> na Primary Assembly 117300 na supercont1.25 unplaced-scaffold na na KQ234993.1 <> na Primary Assembly 1460 na supercont1.26 unplaced-scaffold na na KQ234994.1 <> na Primary Assembly 131946 na supercont1.27 unplaced-scaffold na na KQ234995.1 <> na Primary Assembly 14067 na supercont1.28 unplaced-scaffold na na KQ234996.1 <> na Primary Assembly 322822 na supercont1.29 unplaced-scaffold na na KQ234997.1 <> na Primary Assembly 49142 na supercont1.30 unplaced-scaffold na na KQ234998.1 <> na Primary Assembly 1752 na supercont1.31 unplaced-scaffold na na KQ234999.1 <> na Primary Assembly 5236 na supercont1.32 unplaced-scaffold na na KQ235000.1 <> na Primary Assembly 76045 na supercont1.33 unplaced-scaffold na na KQ235001.1 <> na Primary Assembly 98347 na supercont1.34 unplaced-scaffold na na KQ235002.1 <> na Primary Assembly 88326 na supercont1.35 unplaced-scaffold na na KQ235003.1 <> na Primary Assembly 175196 na supercont1.36 unplaced-scaffold na na KQ235004.1 <> na Primary Assembly 74963 na supercont1.37 unplaced-scaffold na na KQ235005.1 <> na Primary Assembly 30443 na supercont1.38 unplaced-scaffold na na KQ235006.1 <> na Primary Assembly 25001 na supercont1.39 unplaced-scaffold na na KQ235007.1 <> na Primary Assembly 155638 na supercont1.40 unplaced-scaffold na na KQ235008.1 <> na Primary Assembly 25506 na supercont1.41 unplaced-scaffold na na KQ235009.1 <> na Primary Assembly 174003 na supercont1.42 unplaced-scaffold na na KQ235010.1 <> na Primary Assembly 40747 na supercont1.43 unplaced-scaffold na na KQ235011.1 <> na Primary Assembly 58756 na supercont1.44 unplaced-scaffold na na KQ235012.1 <> na Primary Assembly 186468 na supercont1.45 unplaced-scaffold na na KQ235013.1 <> na Primary Assembly 19027 na supercont1.46 unplaced-scaffold na na KQ235014.1 <> na Primary Assembly 997369 na supercont1.47 unplaced-scaffold na na KQ235015.1 <> na Primary Assembly 1644 na supercont1.48 unplaced-scaffold na na KQ235016.1 <> na Primary Assembly 1296 na supercont1.49 unplaced-scaffold na na KQ235017.1 <> na Primary Assembly 2148 na supercont1.50 unplaced-scaffold na na KQ235018.1 <> na Primary Assembly 1026 na supercont1.51 unplaced-scaffold na na KQ235019.1 <> na Primary Assembly 1198850 na supercont1.52 unplaced-scaffold na na KQ235020.1 <> na Primary Assembly 1265 na supercont1.53 unplaced-scaffold na na KQ235021.1 <> na Primary Assembly 1333 na supercont1.54 unplaced-scaffold na na KQ235022.1 <> na Primary Assembly 1333 na supercont1.55 unplaced-scaffold na na KQ235023.1 <> na Primary Assembly 280301 na supercont1.56 unplaced-scaffold na na KQ235024.1 <> na Primary Assembly 5049 na supercont1.57 unplaced-scaffold na na KQ235025.1 <> na Primary Assembly 1208 na supercont1.58 unplaced-scaffold na na KQ235026.1 <> na Primary Assembly 1117321 na supercont1.59 unplaced-scaffold na na KQ235027.1 <> na Primary Assembly 1479 na supercont1.60 unplaced-scaffold na na KQ235028.1 <> na Primary Assembly 953525 na supercont1.61 unplaced-scaffold na na KQ235029.1 <> na Primary Assembly 1406 na supercont1.62 unplaced-scaffold na na KQ235030.1 <> na Primary Assembly 6365 na supercont1.63 unplaced-scaffold na na KQ235031.1 <> na Primary Assembly 3449 na supercont1.64 unplaced-scaffold na na KQ235032.1 <> na Primary Assembly 323930 na supercont1.65 unplaced-scaffold na na KQ235033.1 <> na Primary Assembly 1268 na supercont1.66 unplaced-scaffold na na KQ235034.1 <> na Primary Assembly 7201 na supercont1.67 unplaced-scaffold na na KQ235035.1 <> na Primary Assembly 64304 na supercont1.68 unplaced-scaffold na na KQ235036.1 <> na Primary Assembly 288734 na supercont1.69 unplaced-scaffold na na KQ235037.1 <> na Primary Assembly 2358 na supercont1.70 unplaced-scaffold na na KQ235038.1 <> na Primary Assembly 1531742 na supercont1.71 unplaced-scaffold na na KQ235039.1 <> na Primary Assembly 2568 na supercont1.72 unplaced-scaffold na na KQ235040.1 <> na Primary Assembly 26231 na supercont1.73 unplaced-scaffold na na KQ235041.1 <> na Primary Assembly 5759 na supercont1.74 unplaced-scaffold na na KQ235042.1 <> na Primary Assembly 1072 na supercont1.75 unplaced-scaffold na na KQ235043.1 <> na Primary Assembly 177163 na supercont1.76 unplaced-scaffold na na KQ235044.1 <> na Primary Assembly 1447 na supercont1.77 unplaced-scaffold na na KQ235045.1 <> na Primary Assembly 35608 na supercont1.78 unplaced-scaffold na na KQ235046.1 <> na Primary Assembly 354583 na supercont1.79 unplaced-scaffold na na KQ235047.1 <> na Primary Assembly 1190 na supercont1.80 unplaced-scaffold na na KQ235048.1 <> na Primary Assembly 1278 na supercont1.81 unplaced-scaffold na na KQ235049.1 <> na Primary Assembly 2395 na supercont1.82 unplaced-scaffold na na KQ235050.1 <> na Primary Assembly 2395 na supercont1.83 unplaced-scaffold na na KQ235051.1 <> na Primary Assembly 6333 na supercont1.84 unplaced-scaffold na na KQ235052.1 <> na Primary Assembly 1412 na supercont1.85 unplaced-scaffold na na KQ235053.1 <> na Primary Assembly 598892 na supercont1.86 unplaced-scaffold na na KQ235054.1 <> na Primary Assembly 1259 na supercont1.87 unplaced-scaffold na na KQ235055.1 <> na Primary Assembly 1630 na supercont1.88 unplaced-scaffold na na KQ235056.1 <> na Primary Assembly 3529 na supercont1.89 unplaced-scaffold na na KQ235057.1 <> na Primary Assembly 1361 na supercont1.90 unplaced-scaffold na na KQ235058.1 <> na Primary Assembly 9795 na supercont1.91 unplaced-scaffold na na KQ235059.1 <> na Primary Assembly 485975 na supercont1.92 unplaced-scaffold na na KQ235060.1 <> na Primary Assembly 2315 na supercont1.93 unplaced-scaffold na na KQ235061.1 <> na Primary Assembly 234749 na supercont1.94 unplaced-scaffold na na KQ235062.1 <> na Primary Assembly 1892 na supercont1.95 unplaced-scaffold na na KQ235063.1 <> na Primary Assembly 1476611 na supercont1.96 unplaced-scaffold na na KQ235064.1 <> na Primary Assembly 1397 na supercont1.97 unplaced-scaffold na na KQ235065.1 <> na Primary Assembly 1121 na supercont1.98 unplaced-scaffold na na KQ235066.1 <> na Primary Assembly 1026 na supercont1.99 unplaced-scaffold na na KQ235067.1 <> na Primary Assembly 10050 na supercont1.100 unplaced-scaffold na na KQ235068.1 <> na Primary Assembly 36554 na supercont1.101 unplaced-scaffold na na KQ235069.1 <> na Primary Assembly 927444 na supercont1.102 unplaced-scaffold na na KQ235070.1 <> na Primary Assembly 1171855 na supercont1.103 unplaced-scaffold na na KQ235071.1 <> na Primary Assembly 1300 na supercont1.104 unplaced-scaffold na na KQ235072.1 <> na Primary Assembly 1482 na supercont1.105 unplaced-scaffold na na KQ235073.1 <> na Primary Assembly 198926 na supercont1.106 unplaced-scaffold na na KQ235074.1 <> na Primary Assembly 8126 na supercont1.107 unplaced-scaffold na na KQ235075.1 <> na Primary Assembly 6957 na supercont1.108 unplaced-scaffold na na KQ235076.1 <> na Primary Assembly 49479 na supercont1.109 unplaced-scaffold na na KQ235077.1 <> na Primary Assembly 1567 na supercont1.110 unplaced-scaffold na na KQ235078.1 <> na Primary Assembly 3620 na supercont1.111 unplaced-scaffold na na KQ235079.1 <> na Primary Assembly 13093 na supercont1.112 unplaced-scaffold na na KQ235080.1 <> na Primary Assembly 2136 na supercont1.113 unplaced-scaffold na na KQ235081.1 <> na Primary Assembly 1850 na supercont1.114 unplaced-scaffold na na KQ235082.1 <> na Primary Assembly 1775 na supercont1.115 unplaced-scaffold na na KQ235083.1 <> na Primary Assembly 1861 na supercont1.116 unplaced-scaffold na na KQ235084.1 <> na Primary Assembly 3747 na supercont1.117 unplaced-scaffold na na KQ235085.1 <> na Primary Assembly 1089 na supercont1.118 unplaced-scaffold na na KQ235086.1 <> na Primary Assembly 531873 na supercont1.119 unplaced-scaffold na na KQ235087.1 <> na Primary Assembly 7230 na supercont1.120 unplaced-scaffold na na KQ235088.1 <> na Primary Assembly 3189368 na supercont1.121 unplaced-scaffold na na KQ235089.1 <> na Primary Assembly 1249 na supercont1.122 unplaced-scaffold na na KQ235090.1 <> na Primary Assembly 456333 na supercont1.123 unplaced-scaffold na na KQ235091.1 <> na Primary Assembly 141413 na supercont1.124 unplaced-scaffold na na KQ235092.1 <> na Primary Assembly 2435 na supercont1.125 unplaced-scaffold na na KQ235093.1 <> na Primary Assembly 7074 na supercont1.126 unplaced-scaffold na na KQ235094.1 <> na Primary Assembly 7074 na supercont1.127 unplaced-scaffold na na KQ235095.1 <> na Primary Assembly 6370 na supercont1.128 unplaced-scaffold na na KQ235096.1 <> na Primary Assembly 163354 na supercont1.129 unplaced-scaffold na na KQ235097.1 <> na Primary Assembly 2606 na supercont1.130 unplaced-scaffold na na KQ235098.1 <> na Primary Assembly 3523 na supercont1.131 unplaced-scaffold na na KQ235099.1 <> na Primary Assembly 1360 na supercont1.132 unplaced-scaffold na na KQ235100.1 <> na Primary Assembly 607980 na supercont1.133 unplaced-scaffold na na KQ235101.1 <> na Primary Assembly 8735 na supercont1.134 unplaced-scaffold na na KQ235102.1 <> na Primary Assembly 1165 na supercont1.135 unplaced-scaffold na na KQ235103.1 <> na Primary Assembly 1078 na supercont1.136 unplaced-scaffold na na KQ235104.1 <> na Primary Assembly 994981 na supercont1.137 unplaced-scaffold na na KQ235105.1 <> na Primary Assembly 5144 na supercont1.138 unplaced-scaffold na na KQ235106.1 <> na Primary Assembly 156334 na supercont1.139 unplaced-scaffold na na KQ235107.1 <> na Primary Assembly 945052 na supercont1.140 unplaced-scaffold na na KQ235108.1 <> na Primary Assembly 5035 na supercont1.141 unplaced-scaffold na na KQ235109.1 <> na Primary Assembly 5491 na supercont1.142 unplaced-scaffold na na KQ235110.1 <> na Primary Assembly 1250785 na supercont1.143 unplaced-scaffold na na KQ235111.1 <> na Primary Assembly 1089 na supercont1.144 unplaced-scaffold na na KQ235112.1 <> na Primary Assembly 1291 na supercont1.145 unplaced-scaffold na na KQ235113.1 <> na Primary Assembly 1381 na supercont1.146 unplaced-scaffold na na KQ235114.1 <> na Primary Assembly 7661 na supercont1.147 unplaced-scaffold na na KQ235115.1 <> na Primary Assembly 6889 na supercont1.148 unplaced-scaffold na na KQ235116.1 <> na Primary Assembly 1107 na supercont1.149 unplaced-scaffold na na KQ235117.1 <> na Primary Assembly 930415 na supercont1.150 unplaced-scaffold na na KQ235118.1 <> na Primary Assembly 23074 na supercont1.151 unplaced-scaffold na na KQ235119.1 <> na Primary Assembly 28402 na supercont1.152 unplaced-scaffold na na KQ235120.1 <> na Primary Assembly 1002 na supercont1.153 unplaced-scaffold na na KQ235121.1 <> na Primary Assembly 1256 na supercont1.154 unplaced-scaffold na na KQ235122.1 <> na Primary Assembly 20356 na supercont1.155 unplaced-scaffold na na KQ235123.1 <> na Primary Assembly 1323 na supercont1.156 unplaced-scaffold na na KQ235124.1 <> na Primary Assembly 9006 na supercont1.157 unplaced-scaffold na na KQ235125.1 <> na Primary Assembly 77465 na supercont1.158 unplaced-scaffold na na KQ235126.1 <> na Primary Assembly 23827 na supercont1.159 unplaced-scaffold na na KQ235127.1 <> na Primary Assembly 34448 na supercont1.160 unplaced-scaffold na na KQ235128.1 <> na Primary Assembly 3181 na supercont1.161 unplaced-scaffold na na KQ235129.1 <> na Primary Assembly 4028 na supercont1.162 unplaced-scaffold na na KQ235130.1 <> na Primary Assembly 30343 na supercont1.163 unplaced-scaffold na na KQ235131.1 <> na Primary Assembly 7256 na supercont1.164 unplaced-scaffold na na KQ235132.1 <> na Primary Assembly 26051 na supercont1.165 unplaced-scaffold na na KQ235133.1 <> na Primary Assembly 3819 na supercont1.166 unplaced-scaffold na na KQ235134.1 <> na Primary Assembly 2435 na supercont1.167 unplaced-scaffold na na KQ235135.1 <> na Primary Assembly 1206 na supercont1.168 unplaced-scaffold na na KQ235136.1 <> na Primary Assembly 4085 na supercont1.169 unplaced-scaffold na na KQ235137.1 <> na Primary Assembly 1018 na supercont1.170 unplaced-scaffold na na KQ235138.1 <> na Primary Assembly 54335 na supercont1.171 unplaced-scaffold na na KQ235139.1 <> na Primary Assembly 20210 na supercont1.172 unplaced-scaffold na na KQ235140.1 <> na Primary Assembly 1033 na supercont1.173 unplaced-scaffold na na KQ235141.1 <> na Primary Assembly 1452 na supercont1.174 unplaced-scaffold na na KQ235142.1 <> na Primary Assembly 2820 na supercont1.175 unplaced-scaffold na na KQ235143.1 <> na Primary Assembly 1492 na supercont1.176 unplaced-scaffold na na KQ235144.1 <> na Primary Assembly 1058 na supercont1.177 unplaced-scaffold na na KQ235145.1 <> na Primary Assembly 1789 na supercont1.178 unplaced-scaffold na na KQ235146.1 <> na Primary Assembly 522174 na supercont1.179 unplaced-scaffold na na KQ235147.1 <> na Primary Assembly 16162 na supercont1.180 unplaced-scaffold na na KQ235148.1 <> na Primary Assembly 4723 na supercont1.181 unplaced-scaffold na na KQ235149.1 <> na Primary Assembly 20864 na supercont1.182 unplaced-scaffold na na KQ235150.1 <> na Primary Assembly 39906 na supercont1.183 unplaced-scaffold na na KQ235151.1 <> na Primary Assembly 13399 na supercont1.184 unplaced-scaffold na na KQ235152.1 <> na Primary Assembly 14603 na supercont1.185 unplaced-scaffold na na KQ235153.1 <> na Primary Assembly 6210 na supercont1.186 unplaced-scaffold na na KQ235154.1 <> na Primary Assembly 5432 na supercont1.187 unplaced-scaffold na na KQ235155.1 <> na Primary Assembly 24834 na supercont1.188 unplaced-scaffold na na KQ235156.1 <> na Primary Assembly 5135 na supercont1.189 unplaced-scaffold na na KQ235157.1 <> na Primary Assembly 100619 na supercont1.190 unplaced-scaffold na na KQ235158.1 <> na Primary Assembly 1895 na supercont1.191 unplaced-scaffold na na KQ235159.1 <> na Primary Assembly 39304 na supercont1.192 unplaced-scaffold na na KQ235160.1 <> na Primary Assembly 16120 na supercont1.193 unplaced-scaffold na na KQ235161.1 <> na Primary Assembly 2442 na supercont1.194 unplaced-scaffold na na KQ235162.1 <> na Primary Assembly 19246 na supercont1.195 unplaced-scaffold na na KQ235163.1 <> na Primary Assembly 4627 na supercont1.196 unplaced-scaffold na na KQ235164.1 <> na Primary Assembly 1172 na supercont1.197 unplaced-scaffold na na KQ235165.1 <> na Primary Assembly 1293 na supercont1.198 unplaced-scaffold na na KQ235166.1 <> na Primary Assembly 53277 na supercont1.199 unplaced-scaffold na na KQ235167.1 <> na Primary Assembly 3010 na supercont1.200 unplaced-scaffold na na KQ235168.1 <> na Primary Assembly 1204 na supercont1.201 unplaced-scaffold na na KQ235169.1 <> na Primary Assembly 11505 na supercont1.202 unplaced-scaffold na na KQ235170.1 <> na Primary Assembly 2702 na supercont1.203 unplaced-scaffold na na KQ235171.1 <> na Primary Assembly 1057 na supercont1.204 unplaced-scaffold na na KQ235172.1 <> na Primary Assembly 1283 na supercont1.205 unplaced-scaffold na na KQ235173.1 <> na Primary Assembly 26608 na Pltd assembled-molecule Pltd Apicoplast JQ437258.1 <> na non-nuclear 29397 na