# Assembly name: pbe3.h15 # Organism name: Plasmodiophora brassicae (eukaryotes) # Isolate: e3 # Taxid: 37360 # BioSample: SAMEA3232990 # BioProject: PRJEB8376 # Submitter: SLU # Date: 2015-06-30 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: CDSF01 # Assembly method: newbler, sspace # Genome coverage: 500x # Sequencing technology: 454, Illumina # GenBank assembly accession: GCA_001049375.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001049385.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name CDSF01000001 unplaced-scaffold na na CDSF01000001.1 <> na Primary Assembly 1189627 na CDSF01000002 unplaced-scaffold na na CDSF01000002.1 <> na Primary Assembly 705960 na CDSF01000003 unplaced-scaffold na na CDSF01000003.1 <> na Primary Assembly 18952 na CDSF01000004 unplaced-scaffold na na CDSF01000004.1 <> na Primary Assembly 17228 na CDSF01000005 unplaced-scaffold na na CDSF01000005.1 <> na Primary Assembly 16875 na CDSF01000006 unplaced-scaffold na na CDSF01000006.1 <> na Primary Assembly 16069 na CDSF01000007 unplaced-scaffold na na CDSF01000007.1 <> na Primary Assembly 14984 na CDSF01000008 unplaced-scaffold na na CDSF01000008.1 <> na Primary Assembly 14940 na CDSF01000009 unplaced-scaffold na na CDSF01000009.1 <> na Primary Assembly 14527 na CDSF01000010 unplaced-scaffold na na CDSF01000010.1 <> na Primary Assembly 14447 na CDSF01000011 unplaced-scaffold na na CDSF01000011.1 <> na Primary Assembly 14272 na CDSF01000012 unplaced-scaffold na na CDSF01000012.1 <> na Primary Assembly 14209 na CDSF01000013 unplaced-scaffold na na CDSF01000013.1 <> na Primary Assembly 678328 na CDSF01000014 unplaced-scaffold na na CDSF01000014.1 <> na Primary Assembly 13565 na CDSF01000015 unplaced-scaffold na na CDSF01000015.1 <> na Primary Assembly 13340 na CDSF01000016 unplaced-scaffold na na CDSF01000016.1 <> na Primary Assembly 12955 na CDSF01000017 unplaced-scaffold na na CDSF01000017.1 <> na Primary Assembly 12922 na CDSF01000018 unplaced-scaffold na na CDSF01000018.1 <> na Primary Assembly 12769 na CDSF01000019 unplaced-scaffold na na CDSF01000019.1 <> na Primary Assembly 12498 na CDSF01000020 unplaced-scaffold na na CDSF01000020.1 <> na Primary Assembly 12211 na CDSF01000021 unplaced-scaffold na na CDSF01000021.1 <> na Primary Assembly 11181 na CDSF01000022 unplaced-scaffold na na CDSF01000022.1 <> na Primary Assembly 9681 na CDSF01000023 unplaced-scaffold na na CDSF01000023.1 <> na Primary Assembly 9164 na CDSF01000024 unplaced-scaffold na na CDSF01000024.1 <> na Primary Assembly 658195 na CDSF01000025 unplaced-scaffold na na CDSF01000025.1 <> na Primary Assembly 9093 na CDSF01000026 unplaced-scaffold na na CDSF01000026.1 <> na Primary Assembly 9080 na CDSF01000027 unplaced-scaffold na na CDSF01000027.1 <> na Primary Assembly 8662 na CDSF01000028 unplaced-scaffold na na CDSF01000028.1 <> na Primary Assembly 8506 na CDSF01000029 unplaced-scaffold na na CDSF01000029.1 <> na Primary Assembly 8193 na CDSF01000030 unplaced-scaffold na na CDSF01000030.1 <> na Primary Assembly 7379 na CDSF01000031 unplaced-scaffold na na CDSF01000031.1 <> na Primary Assembly 7292 na CDSF01000032 unplaced-scaffold na na CDSF01000032.1 <> na Primary Assembly 6748 na CDSF01000033 unplaced-scaffold na na CDSF01000033.1 <> na Primary Assembly 6696 na CDSF01000034 unplaced-scaffold na na CDSF01000034.1 <> na Primary Assembly 6406 na CDSF01000035 unplaced-scaffold na na CDSF01000035.1 <> na Primary Assembly 630556 na CDSF01000036 unplaced-scaffold na na CDSF01000036.1 <> na Primary Assembly 6377 na CDSF01000037 unplaced-scaffold na na CDSF01000037.1 <> na Primary Assembly 5730 na CDSF01000038 unplaced-scaffold na na CDSF01000038.1 <> na Primary Assembly 5619 na CDSF01000039 unplaced-scaffold na na CDSF01000039.1 <> na Primary Assembly 5366 na CDSF01000040 unplaced-scaffold na na CDSF01000040.1 <> na Primary Assembly 5139 na CDSF01000041 unplaced-scaffold na na CDSF01000041.1 <> na Primary Assembly 4890 na CDSF01000042 unplaced-scaffold na na CDSF01000042.1 <> na Primary Assembly 4849 na CDSF01000043 unplaced-scaffold na na CDSF01000043.1 <> na Primary Assembly 4750 na CDSF01000044 unplaced-scaffold na na CDSF01000044.1 <> na Primary Assembly 4571 na CDSF01000045 unplaced-scaffold na na CDSF01000045.1 <> na Primary Assembly 4559 na CDSF01000046 unplaced-scaffold na na CDSF01000046.1 <> na Primary Assembly 577815 na CDSF01000047 unplaced-scaffold na na CDSF01000047.1 <> na Primary Assembly 4474 na CDSF01000048 unplaced-scaffold na na CDSF01000048.1 <> na Primary Assembly 4284 na CDSF01000049 unplaced-scaffold na na CDSF01000049.1 <> na Primary Assembly 4143 na CDSF01000050 unplaced-scaffold na na CDSF01000050.1 <> na Primary Assembly 4117 na CDSF01000051 unplaced-scaffold na na CDSF01000051.1 <> na Primary Assembly 3987 na CDSF01000052 unplaced-scaffold na na CDSF01000052.1 <> na Primary Assembly 3606 na CDSF01000053 unplaced-scaffold na na CDSF01000053.1 <> na Primary Assembly 3605 na CDSF01000054 unplaced-scaffold na na CDSF01000054.1 <> na Primary Assembly 3364 na CDSF01000055 unplaced-scaffold na na CDSF01000055.1 <> na Primary Assembly 3333 na CDSF01000056 unplaced-scaffold na na CDSF01000056.1 <> na Primary Assembly 3235 na CDSF01000057 unplaced-scaffold na na CDSF01000057.1 <> na Primary Assembly 572161 na CDSF01000058 unplaced-scaffold na na CDSF01000058.1 <> na Primary Assembly 3228 na CDSF01000059 unplaced-scaffold na na CDSF01000059.1 <> na Primary Assembly 3167 na CDSF01000060 unplaced-scaffold na na CDSF01000060.1 <> na Primary Assembly 3076 na CDSF01000061 unplaced-scaffold na na CDSF01000061.1 <> na Primary Assembly 2994 na CDSF01000062 unplaced-scaffold na na CDSF01000062.1 <> na Primary Assembly 2615 na CDSF01000063 unplaced-scaffold na na CDSF01000063.1 <> na Primary Assembly 2520 na CDSF01000064 unplaced-scaffold na na CDSF01000064.1 <> na Primary Assembly 2504 na CDSF01000065 unplaced-scaffold na na CDSF01000065.1 <> na Primary Assembly 2463 na CDSF01000066 unplaced-scaffold na na CDSF01000066.1 <> na Primary Assembly 2461 na CDSF01000067 unplaced-scaffold na na CDSF01000067.1 <> na Primary Assembly 2319 na CDSF01000068 unplaced-scaffold na na CDSF01000068.1 <> na Primary Assembly 472887 na CDSF01000069 unplaced-scaffold na na CDSF01000069.1 <> na Primary Assembly 2294 na CDSF01000070 unplaced-scaffold na na CDSF01000070.1 <> na Primary Assembly 2212 na CDSF01000071 unplaced-scaffold na na CDSF01000071.1 <> na Primary Assembly 2082 na CDSF01000072 unplaced-scaffold na na CDSF01000072.1 <> na Primary Assembly 2053 na CDSF01000073 unplaced-scaffold na na CDSF01000073.1 <> na Primary Assembly 2043 na CDSF01000074 unplaced-scaffold na na CDSF01000074.1 <> na Primary Assembly 1868 na CDSF01000075 unplaced-scaffold na na CDSF01000075.1 <> na Primary Assembly 1868 na CDSF01000076 unplaced-scaffold na na CDSF01000076.1 <> na Primary Assembly 455665 na CDSF01000077 unplaced-scaffold na na CDSF01000077.1 <> na Primary Assembly 442873 na CDSF01000078 unplaced-scaffold na na CDSF01000078.1 <> na Primary Assembly 433301 na CDSF01000079 unplaced-scaffold na na CDSF01000079.1 <> na Primary Assembly 1084683 na CDSF01000080 unplaced-scaffold na na CDSF01000080.1 <> na Primary Assembly 425414 na CDSF01000081 unplaced-scaffold na na CDSF01000081.1 <> na Primary Assembly 417576 na CDSF01000082 unplaced-scaffold na na CDSF01000082.1 <> na Primary Assembly 411197 na CDSF01000083 unplaced-scaffold na na CDSF01000083.1 <> na Primary Assembly 380421 na CDSF01000084 unplaced-scaffold na na CDSF01000084.1 <> na Primary Assembly 374078 na CDSF01000085 unplaced-scaffold na na CDSF01000085.1 <> na Primary Assembly 368109 na CDSF01000086 unplaced-scaffold na na CDSF01000086.1 <> na Primary Assembly 353758 na CDSF01000087 unplaced-scaffold na na CDSF01000087.1 <> na Primary Assembly 339143 na CDSF01000088 unplaced-scaffold na na CDSF01000088.1 <> na Primary Assembly 337454 na CDSF01000089 unplaced-scaffold na na CDSF01000089.1 <> na Primary Assembly 316889 na CDSF01000090 unplaced-scaffold na na CDSF01000090.1 <> na Primary Assembly 920768 na CDSF01000091 unplaced-scaffold na na CDSF01000091.1 <> na Primary Assembly 309066 na CDSF01000092 unplaced-scaffold na na CDSF01000092.1 <> na Primary Assembly 235903 na CDSF01000093 unplaced-scaffold na na CDSF01000093.1 <> na Primary Assembly 235522 na CDSF01000094 unplaced-scaffold na na CDSF01000094.1 <> na Primary Assembly 220827 na CDSF01000095 unplaced-scaffold na na CDSF01000095.1 <> na Primary Assembly 204293 na CDSF01000096 unplaced-scaffold na na CDSF01000096.1 <> na Primary Assembly 203435 na CDSF01000097 unplaced-scaffold na na CDSF01000097.1 <> na Primary Assembly 202209 na CDSF01000098 unplaced-scaffold na na CDSF01000098.1 <> na Primary Assembly 189600 na CDSF01000099 unplaced-scaffold na na CDSF01000099.1 <> na Primary Assembly 174244 na CDSF01000100 unplaced-scaffold na na CDSF01000100.1 <> na Primary Assembly 156746 na CDSF01000101 unplaced-scaffold na na CDSF01000101.1 <> na Primary Assembly 873781 na CDSF01000102 unplaced-scaffold na na CDSF01000102.1 <> na Primary Assembly 149887 na CDSF01000103 unplaced-scaffold na na CDSF01000103.1 <> na Primary Assembly 144921 na CDSF01000104 unplaced-scaffold na na CDSF01000104.1 <> na Primary Assembly 142974 na CDSF01000105 unplaced-scaffold na na CDSF01000105.1 <> na Primary Assembly 135484 na CDSF01000106 unplaced-scaffold na na CDSF01000106.1 <> na Primary Assembly 132990 na CDSF01000107 unplaced-scaffold na na CDSF01000107.1 <> na Primary Assembly 130636 na CDSF01000108 unplaced-scaffold na na CDSF01000108.1 <> na Primary Assembly 129424 na CDSF01000109 unplaced-scaffold na na CDSF01000109.1 <> na Primary Assembly 128288 na CDSF01000110 unplaced-scaffold na na CDSF01000110.1 <> na Primary Assembly 123904 na CDSF01000111 unplaced-scaffold na na CDSF01000111.1 <> na Primary Assembly 123219 na CDSF01000112 unplaced-scaffold na na CDSF01000112.1 <> na Primary Assembly 800634 na CDSF01000113 unplaced-scaffold na na CDSF01000113.1 <> na Primary Assembly 112874 na CDSF01000114 unplaced-scaffold na na CDSF01000114.1 <> na Primary Assembly 104294 na CDSF01000115 unplaced-scaffold na na CDSF01000115.1 <> na Primary Assembly 102331 na CDSF01000116 unplaced-scaffold na na CDSF01000116.1 <> na Primary Assembly 101244 na CDSF01000117 unplaced-scaffold na na CDSF01000117.1 <> na Primary Assembly 98622 na CDSF01000118 unplaced-scaffold na na CDSF01000118.1 <> na Primary Assembly 96286 na CDSF01000119 unplaced-scaffold na na CDSF01000119.1 <> na Primary Assembly 95987 na CDSF01000120 unplaced-scaffold na na CDSF01000120.1 <> na Primary Assembly 91139 na CDSF01000121 unplaced-scaffold na na CDSF01000121.1 <> na Primary Assembly 87900 na CDSF01000122 unplaced-scaffold na na CDSF01000122.1 <> na Primary Assembly 778307 na CDSF01000123 unplaced-scaffold na na CDSF01000123.1 <> na Primary Assembly 86358 na CDSF01000124 unplaced-scaffold na na CDSF01000124.1 <> na Primary Assembly 83771 na CDSF01000125 unplaced-scaffold na na CDSF01000125.1 <> na Primary Assembly 80220 na CDSF01000126 unplaced-scaffold na na CDSF01000126.1 <> na Primary Assembly 77000 na CDSF01000127 unplaced-scaffold na na CDSF01000127.1 <> na Primary Assembly 76644 na CDSF01000128 unplaced-scaffold na na CDSF01000128.1 <> na Primary Assembly 76474 na CDSF01000129 unplaced-scaffold na na CDSF01000129.1 <> na Primary Assembly 76101 na CDSF01000130 unplaced-scaffold na na CDSF01000130.1 <> na Primary Assembly 73652 na CDSF01000131 unplaced-scaffold na na CDSF01000131.1 <> na Primary Assembly 71929 na CDSF01000132 unplaced-scaffold na na CDSF01000132.1 <> na Primary Assembly 71276 na CDSF01000133 unplaced-scaffold na na CDSF01000133.1 <> na Primary Assembly 764586 na CDSF01000134 unplaced-scaffold na na CDSF01000134.1 <> na Primary Assembly 70729 na CDSF01000135 unplaced-scaffold na na CDSF01000135.1 <> na Primary Assembly 67221 na CDSF01000136 unplaced-scaffold na na CDSF01000136.1 <> na Primary Assembly 62613 na CDSF01000137 unplaced-scaffold na na CDSF01000137.1 <> na Primary Assembly 62551 na CDSF01000138 unplaced-scaffold na na CDSF01000138.1 <> na Primary Assembly 60369 na CDSF01000139 unplaced-scaffold na na CDSF01000139.1 <> na Primary Assembly 57973 na CDSF01000140 unplaced-scaffold na na CDSF01000140.1 <> na Primary Assembly 52897 na CDSF01000141 unplaced-scaffold na na CDSF01000141.1 <> na Primary Assembly 50259 na CDSF01000142 unplaced-scaffold na na CDSF01000142.1 <> na Primary Assembly 45635 na CDSF01000143 unplaced-scaffold na na CDSF01000143.1 <> na Primary Assembly 44738 na CDSF01000144 unplaced-scaffold na na CDSF01000144.1 <> na Primary Assembly 755806 na CDSF01000145 unplaced-scaffold na na CDSF01000145.1 <> na Primary Assembly 42163 na CDSF01000146 unplaced-scaffold na na CDSF01000146.1 <> na Primary Assembly 41447 na CDSF01000147 unplaced-scaffold na na CDSF01000147.1 <> na Primary Assembly 37916 na CDSF01000148 unplaced-scaffold na na CDSF01000148.1 <> na Primary Assembly 37739 na CDSF01000149 unplaced-scaffold na na CDSF01000149.1 <> na Primary Assembly 36592 na CDSF01000150 unplaced-scaffold na na CDSF01000150.1 <> na Primary Assembly 35682 na CDSF01000151 unplaced-scaffold na na CDSF01000151.1 <> na Primary Assembly 34841 na CDSF01000152 unplaced-scaffold na na CDSF01000152.1 <> na Primary Assembly 34332 na CDSF01000153 unplaced-scaffold na na CDSF01000153.1 <> na Primary Assembly 34301 na CDSF01000154 unplaced-scaffold na na CDSF01000154.1 <> na Primary Assembly 34064 na CDSF01000155 unplaced-scaffold na na CDSF01000155.1 <> na Primary Assembly 720339 na CDSF01000156 unplaced-scaffold na na CDSF01000156.1 <> na Primary Assembly 31180 na CDSF01000157 unplaced-scaffold na na CDSF01000157.1 <> na Primary Assembly 29311 na CDSF01000158 unplaced-scaffold na na CDSF01000158.1 <> na Primary Assembly 27082 na CDSF01000159 unplaced-scaffold na na CDSF01000159.1 <> na Primary Assembly 25902 na CDSF01000160 unplaced-scaffold na na CDSF01000160.1 <> na Primary Assembly 25355 na CDSF01000161 unplaced-scaffold na na CDSF01000161.1 <> na Primary Assembly 24279 na CDSF01000162 unplaced-scaffold na na CDSF01000162.1 <> na Primary Assembly 20279 na CDSF01000163 unplaced-scaffold na na CDSF01000163.1 <> na Primary Assembly 19818 na CDSF01000164 unplaced-scaffold na na CDSF01000164.1 <> na Primary Assembly 19775 na CDSF01000165 unplaced-scaffold na na CDSF01000165.1 <> na Primary Assembly 19189 na