# Assembly name: CryHomTU502-1.0 # Organism name: Cryptosporidium hominis (apicomplexans) # Infraspecific name: strain=TU502_2012 # Taxid: 237895 # BioSample: SAMN02382005 # BioProject: PRJNA222836 # Submitter: IGS # Date: 2016-03-17 # Assembly type: haploid # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JIBM01 # Assembly method: MaSuRCA v. 1.9.2 # Expected final version: yes # Genome coverage: 48.65x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_001593465.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001593505.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name ctg7180000000294_1 unplaced-scaffold na na JIBM01000001.1 <> na Primary Assembly 6419 na ctg7180000000295_1 unplaced-scaffold na na JIBM01000002.1 <> na Primary Assembly 238509 na ctg7180000000296_1 unplaced-scaffold na na JIBM01000003.1 <> na Primary Assembly 357 na ctg7180000000297_1 unplaced-scaffold na na JIBM01000004.1 <> na Primary Assembly 1105 na ctg7180000000299_1 unplaced-scaffold na na JIBM01000005.1 <> na Primary Assembly 321 na ctg7180000000301_1 unplaced-scaffold na na JIBM01000006.1 <> na Primary Assembly 411 na ctg7180000000302_1 unplaced-scaffold na na JIBM01000007.1 <> na Primary Assembly 132915 na ctg7180000000303_1 unplaced-scaffold na na JIBM01000008.1 <> na Primary Assembly 126853 na ctg7180000000305_1 unplaced-scaffold na na JIBM01000009.1 <> na Primary Assembly 118000 na ctg7180000000306_1 unplaced-scaffold na na JIBM01000010.1 <> na Primary Assembly 344 na ctg7180000000307_1 unplaced-scaffold na na JIBM01000011.1 <> na Primary Assembly 931 na ctg7180000000308_1 unplaced-scaffold na na JIBM01000012.1 <> na Primary Assembly 1830 na ctg7180000000309_1 unplaced-scaffold na na JIBM01000013.1 <> na Primary Assembly 323 na ctg7180000000310_1 unplaced-scaffold na na JIBM01000014.1 <> na Primary Assembly 767 na ctg7180000000311_1 unplaced-scaffold na na JIBM01000015.1 <> na Primary Assembly 1583 na ctg7180000000312_1 unplaced-scaffold na na JIBM01000016.1 <> na Primary Assembly 733 na ctg7180000000313_1 unplaced-scaffold na na JIBM01000017.1 <> na Primary Assembly 61067 na ctg7180000000314_1 unplaced-scaffold na na JIBM01000018.1 <> na Primary Assembly 57920 na ctg7180000000315_1 unplaced-scaffold na na JIBM01000019.1 <> na Primary Assembly 1877 na ctg7180000000316_1 unplaced-scaffold na na JIBM01000020.1 <> na Primary Assembly 35177 na ctg7180000000317_1 unplaced-scaffold na na JIBM01000021.1 <> na Primary Assembly 2565 na ctg7180000000318_1 unplaced-scaffold na na JIBM01000022.1 <> na Primary Assembly 4250 na ctg7180000000319_1 unplaced-scaffold na na JIBM01000023.1 <> na Primary Assembly 341 na ctg7180000000320_1 unplaced-scaffold na na JIBM01000024.1 <> na Primary Assembly 13603 na ctg7180000000321_1 unplaced-scaffold na na JIBM01000025.1 <> na Primary Assembly 29030 na ctg7180000000322_1 unplaced-scaffold na na JIBM01000026.1 <> na Primary Assembly 4300 na ctg7180000000323_1 unplaced-scaffold na na JIBM01000027.1 <> na Primary Assembly 2015 na ctg7180000000324_1 unplaced-scaffold na na JIBM01000028.1 <> na Primary Assembly 23333 na ctg7180000000325_1 unplaced-scaffold na na JIBM01000029.1 <> na Primary Assembly 449 na ctg7180000000326_1 unplaced-scaffold na na JIBM01000030.1 <> na Primary Assembly 16837 na ctg7180000000328_1 unplaced-scaffold na na JIBM01000031.1 <> na Primary Assembly 947 na ctg7180000000329_1 unplaced-scaffold na na JIBM01000032.1 <> na Primary Assembly 1394 na ctg7180000000331_1 unplaced-scaffold na na JIBM01000033.1 <> na Primary Assembly 560 na ctg7180000000332_1 unplaced-scaffold na na JIBM01000034.1 <> na Primary Assembly 338 na ctg7180000000333_1 unplaced-scaffold na na JIBM01000035.1 <> na Primary Assembly 14477 na ctg7180000000335_1 unplaced-scaffold na na JIBM01000036.1 <> na Primary Assembly 2487 na ctg7180000000336_1 unplaced-scaffold na na JIBM01000037.1 <> na Primary Assembly 9532 na ctg7180000000337_1 unplaced-scaffold na na JIBM01000038.1 <> na Primary Assembly 780 na ctg7180000000338_1 unplaced-scaffold na na JIBM01000039.1 <> na Primary Assembly 452 na ctg7180000000339_1 unplaced-scaffold na na JIBM01000040.1 <> na Primary Assembly 6684 na ctg7180000000340_1 unplaced-scaffold na na JIBM01000041.1 <> na Primary Assembly 381 na ctg7180000000341_1 unplaced-scaffold na na JIBM01000042.1 <> na Primary Assembly 382 na ctg7180000000342_1 unplaced-scaffold na na JIBM01000043.1 <> na Primary Assembly 1701 na ctg7180000000343_1 unplaced-scaffold na na JIBM01000044.1 <> na Primary Assembly 1018 na ctg7180000000344_1 unplaced-scaffold na na JIBM01000045.1 <> na Primary Assembly 843 na ctg7180000000345_1 unplaced-scaffold na na JIBM01000046.1 <> na Primary Assembly 1084 na ctg7180000000346_1 unplaced-scaffold na na JIBM01000047.1 <> na Primary Assembly 879 na ctg7180000000347_1 unplaced-scaffold na na JIBM01000048.1 <> na Primary Assembly 329 na ctg7180000000348_1 unplaced-scaffold na na JIBM01000049.1 <> na Primary Assembly 351 na ctg7180000000349_1 unplaced-scaffold na na JIBM01000050.1 <> na Primary Assembly 509 na ctg7180000000351_1 unplaced-scaffold na na JIBM01000051.1 <> na Primary Assembly 447 na ctg7180000000352_1 unplaced-scaffold na na JIBM01000052.1 <> na Primary Assembly 429 na ctg7180000000353_1 unplaced-scaffold na na JIBM01000053.1 <> na Primary Assembly 978 na ctg7180000000354_1 unplaced-scaffold na na JIBM01000054.1 <> na Primary Assembly 308 na ctg7180000000357_1 unplaced-scaffold na na JIBM01000055.1 <> na Primary Assembly 862 na ctg7180000000358_1 unplaced-scaffold na na JIBM01000056.1 <> na Primary Assembly 869 na ctg7180000000359_1 unplaced-scaffold na na JIBM01000057.1 <> na Primary Assembly 1115 na ctg7180000000362_1 unplaced-scaffold na na JIBM01000058.1 <> na Primary Assembly 455 na ctg7180000000363_1 unplaced-scaffold na na JIBM01000059.1 <> na Primary Assembly 2954 na ctg7180000000364_1 unplaced-scaffold na na JIBM01000060.1 <> na Primary Assembly 848 na ctg7180000000365_1 unplaced-scaffold na na JIBM01000061.1 <> na Primary Assembly 459 na ctg7180000000366_1 unplaced-scaffold na na JIBM01000062.1 <> na Primary Assembly 86043 na ctg7180000000367_1 unplaced-scaffold na na JIBM01000063.1 <> na Primary Assembly 1888 na ctg7180000000368_1 unplaced-scaffold na na JIBM01000064.1 <> na Primary Assembly 2035 na ctg7180000000369_1 unplaced-scaffold na na JIBM01000065.1 <> na Primary Assembly 43482 na ctg7180000000370_1 unplaced-scaffold na na JIBM01000066.1 <> na Primary Assembly 1254 na ctg7180000000371_1 unplaced-scaffold na na JIBM01000067.1 <> na Primary Assembly 4355 na ctg7180000000372_1 unplaced-scaffold na na JIBM01000068.1 <> na Primary Assembly 6773 na ctg7180000000373_1 unplaced-scaffold na na JIBM01000069.1 <> na Primary Assembly 107698 na ctg7180000000374_1 unplaced-scaffold na na JIBM01000070.1 <> na Primary Assembly 216102 na ctg7180000000375_1 unplaced-scaffold na na JIBM01000071.1 <> na Primary Assembly 26398 na ctg7180000000376_1 unplaced-scaffold na na JIBM01000072.1 <> na Primary Assembly 99059 na ctg7180000000377_1 unplaced-scaffold na na JIBM01000073.1 <> na Primary Assembly 65341 na ctg7180000000378_1 unplaced-scaffold na na JIBM01000074.1 <> na Primary Assembly 58538 na ctg7180000000379_1 unplaced-scaffold na na JIBM01000075.1 <> na Primary Assembly 47190 na ctg7180000000380_1 unplaced-scaffold na na JIBM01000076.1 <> na Primary Assembly 44772 na ctg7180000000381_1 unplaced-scaffold na na JIBM01000077.1 <> na Primary Assembly 33908 na ctg7180000000382_1 unplaced-scaffold na na JIBM01000078.1 <> na Primary Assembly 240785 na ctg7180000000383_1 unplaced-scaffold na na JIBM01000079.1 <> na Primary Assembly 9337 na ctg7180000000384_1 unplaced-scaffold na na JIBM01000080.1 <> na Primary Assembly 240070 na ctg7180000000385_1 unplaced-scaffold na na JIBM01000081.1 <> na Primary Assembly 217934 na ctg7180000000386_1 unplaced-scaffold na na JIBM01000082.1 <> na Primary Assembly 191861 na ctg7180000000387_1 unplaced-scaffold na na JIBM01000083.1 <> na Primary Assembly 179413 na ctg7180000000388_1 unplaced-scaffold na na JIBM01000084.1 <> na Primary Assembly 148409 na ctg7180000000389_1 unplaced-scaffold na na JIBM01000085.1 <> na Primary Assembly 126070 na ctg7180000000390_1 unplaced-scaffold na na JIBM01000086.1 <> na Primary Assembly 92326 na ctg7180000000391_1 unplaced-scaffold na na JIBM01000087.1 <> na Primary Assembly 78332 na ctg7180000000392_1 unplaced-scaffold na na JIBM01000088.1 <> na Primary Assembly 50168 na ctg7180000000393_1 unplaced-scaffold na na JIBM01000089.1 <> na Primary Assembly 41383 na ctg7180000000394_1 unplaced-scaffold na na JIBM01000090.1 <> na Primary Assembly 39735 na ctg7180000000395_1 unplaced-scaffold na na JIBM01000091.1 <> na Primary Assembly 4387 na ctg7180000000396_1 unplaced-scaffold na na JIBM01000092.1 <> na Primary Assembly 2599 na ctg7180000000397_1 unplaced-scaffold na na JIBM01000093.1 <> na Primary Assembly 3443 na ctg7180000000398_1 unplaced-scaffold na na JIBM01000094.1 <> na Primary Assembly 14646 na ctg7180000000399_1 unplaced-scaffold na na JIBM01000095.1 <> na Primary Assembly 2752 na ctg7180000000401_1 unplaced-scaffold na na JIBM01000096.1 <> na Primary Assembly 249867 na ctg7180000000402_1 unplaced-scaffold na na JIBM01000097.1 <> na Primary Assembly 5616 na ctg7180000000403_1 unplaced-scaffold na na JIBM01000098.1 <> na Primary Assembly 237136 na ctg7180000000404_1 unplaced-scaffold na na JIBM01000099.1 <> na Primary Assembly 2267 na ctg7180000000405_1 unplaced-scaffold na na JIBM01000100.1 <> na Primary Assembly 328563 na ctg7180000000406_1 unplaced-scaffold na na JIBM01000101.1 <> na Primary Assembly 510706 na ctg7180000000407_1 unplaced-scaffold na na JIBM01000102.1 <> na Primary Assembly 1270815 na ctg7180000000408_1 unplaced-scaffold na na JIBM01000103.1 <> na Primary Assembly 260068 na ctg7180000000409_1 unplaced-scaffold na na JIBM01000104.1 <> na Primary Assembly 287446 na ctg7180000000410_1 unplaced-scaffold na na JIBM01000105.1 <> na Primary Assembly 251584 na ctg7180000000411_1 unplaced-scaffold na na JIBM01000106.1 <> na Primary Assembly 249123 na ctg7180000000412_1 unplaced-scaffold na na JIBM01000107.1 <> na Primary Assembly 246113 na ctg7180000000413_1 unplaced-scaffold na na JIBM01000108.1 <> na Primary Assembly 131506 na ctg7180000000414_1 unplaced-scaffold na na JIBM01000109.1 <> na Primary Assembly 188104 na ctg7180000000415_1 unplaced-scaffold na na JIBM01000110.1 <> na Primary Assembly 181878 na ctg7180000000416_1 unplaced-scaffold na na JIBM01000111.1 <> na Primary Assembly 148925 na ctg7180000000417_1 unplaced-scaffold na na JIBM01000112.1 <> na Primary Assembly 144184 na ctg7180000000418_1 unplaced-scaffold na na JIBM01000113.1 <> na Primary Assembly 138651 na ctg7180000000419_1 unplaced-scaffold na na JIBM01000114.1 <> na Primary Assembly 115463 na ctg7180000000420_1 unplaced-scaffold na na JIBM01000115.1 <> na Primary Assembly 110672 na ctg7180000000421_1 unplaced-scaffold na na JIBM01000116.1 <> na Primary Assembly 321881 na ctg7180000000422_1 unplaced-scaffold na na JIBM01000117.1 <> na Primary Assembly 91262 na ctg7180000000423_1 unplaced-scaffold na na JIBM01000118.1 <> na Primary Assembly 18921 na jtg7180000000334f_7180000000400f_1 unplaced-scaffold na na JIBM01000119.1 <> na Primary Assembly 149485 na