# Assembly name: ASM371945v1 # Organism name: Trypanosoma cruzi (kinetoplastids) # Infraspecific name: strain=G # Taxid: 5693 # BioSample: SAMN04566062 # BioProject: PRJNA315397 # Submitter: Virginia Commonwealth University # Date: 2018-11-08 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: MKKV01 # Assembly method: Newbler v. 2.9 # Expected final version: yes # Genome coverage: 33.0x # Sequencing technology: 454 # Excluded from RefSeq: genome length too small # GenBank assembly accession: GCA_003719455.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003719465.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name TcG_8.4_contig_00001 unplaced-scaffold na na MKKV01000001.1 <> na Primary Assembly 352469 na TcG_8.4_contig_00002 unplaced-scaffold na na MKKV01000002.1 <> na Primary Assembly 346284 na TcG_8.4_contig_00003 unplaced-scaffold na na MKKV01000003.1 <> na Primary Assembly 338169 na TcG_8.4_contig_00004 unplaced-scaffold na na MKKV01000004.1 <> na Primary Assembly 316898 na TcG_8.4_contig_00005 unplaced-scaffold na na MKKV01000005.1 <> na Primary Assembly 307121 na TcG_8.4_contig_00006 unplaced-scaffold na na MKKV01000006.1 <> na Primary Assembly 280929 na TcG_8.4_contig_00007 unplaced-scaffold na na MKKV01000007.1 <> na Primary Assembly 257559 na TcG_8.4_contig_00008 unplaced-scaffold na na MKKV01000008.1 <> na Primary Assembly 242002 na TcG_8.4_contig_00009 unplaced-scaffold na na MKKV01000009.1 <> na Primary Assembly 236490 na TcG_8.4_contig_00010 unplaced-scaffold na na MKKV01000010.1 <> na Primary Assembly 225959 na TcG_8.4_contig_00011 unplaced-scaffold na na MKKV01000012.1 <> na Primary Assembly 199324 na TcG_8.4_contig_00012 unplaced-scaffold na na MKKV01000011.1 <> na Primary Assembly 199680 na TcG_8.4_contig_00013 unplaced-scaffold na na MKKV01000013.1 <> na Primary Assembly 197498 na TcG_8.4_contig_00014 unplaced-scaffold na na MKKV01000015.1 <> na Primary Assembly 190978 na TcG_8.4_contig_00015 unplaced-scaffold na na MKKV01000014.1 <> na Primary Assembly 191350 na TcG_8.4_contig_00016 unplaced-scaffold na na MKKV01000016.1 <> na Primary Assembly 190682 na TcG_8.4_contig_00017 unplaced-scaffold na na MKKV01000017.1 <> na Primary Assembly 183373 na TcG_8.4_contig_00018 unplaced-scaffold na na MKKV01000019.1 <> na Primary Assembly 179740 na TcG_8.4_contig_00019 unplaced-scaffold na na MKKV01000018.1 <> na Primary Assembly 182794 na TcG_8.4_contig_00020 unplaced-scaffold na na MKKV01000020.1 <> na Primary Assembly 179468 na TcG_8.4_contig_00021 unplaced-scaffold na na MKKV01000023.1 <> na Primary Assembly 167921 na TcG_8.4_contig_00022 unplaced-scaffold na na MKKV01000021.1 <> na Primary Assembly 168391 na TcG_8.4_contig_00023 unplaced-scaffold na na MKKV01000022.1 <> na Primary Assembly 168166 na TcG_8.4_contig_00024 unplaced-scaffold na na MKKV01000024.1 <> na Primary Assembly 162128 na TcG_8.4_contig_00025 unplaced-scaffold na na MKKV01000026.1 <> na Primary Assembly 156361 na TcG_8.4_contig_00026 unplaced-scaffold na na MKKV01000025.1 <> na Primary Assembly 158607 na TcG_8.4_contig_00027 unplaced-scaffold na na MKKV01000028.1 <> na Primary Assembly 150297 na TcG_8.4_contig_00028 unplaced-scaffold na na MKKV01000030.1 <> na Primary Assembly 149398 na TcG_8.4_contig_00029 unplaced-scaffold na na MKKV01000029.1 <> na Primary Assembly 149825 na TcG_8.4_contig_00030 unplaced-scaffold na na MKKV01000032.1 <> na Primary Assembly 148479 na TcG_8.4_contig_00031 unplaced-scaffold na na MKKV01000031.1 <> na Primary Assembly 148844 na TcG_8.4_contig_00032 unplaced-scaffold na na MKKV01000027.1 <> na Primary Assembly 151171 na TcG_8.4_contig_00033 unplaced-scaffold na na MKKV01000034.1 <> na Primary Assembly 144304 na TcG_8.4_contig_00034 unplaced-scaffold na na MKKV01000033.1 <> na Primary Assembly 145282 na TcG_8.4_contig_00035 unplaced-scaffold na na MKKV01000035.1 <> na Primary Assembly 140358 na TcG_8.4_contig_00036 unplaced-scaffold na na MKKV01000037.1 <> na Primary Assembly 137050 na TcG_8.4_contig_00037 unplaced-scaffold na na MKKV01000036.1 <> na Primary Assembly 137429 na TcG_8.4_contig_00038 unplaced-scaffold na na MKKV01000038.1 <> na Primary Assembly 133669 na TcG_8.4_contig_00039 unplaced-scaffold na na MKKV01000039.1 <> na Primary Assembly 129752 na TcG_8.4_contig_00040 unplaced-scaffold na na MKKV01000040.1 <> na Primary Assembly 128592 na TcG_8.4_contig_00041 unplaced-scaffold na na MKKV01000041.1 <> na Primary Assembly 125045 na TcG_8.4_contig_00042 unplaced-scaffold na na MKKV01000043.1 <> na Primary Assembly 120551 na TcG_8.4_contig_00043 unplaced-scaffold na na MKKV01000042.1 <> na Primary Assembly 123976 na TcG_8.4_contig_00044 unplaced-scaffold na na MKKV01000044.1 <> na Primary Assembly 117646 na TcG_8.4_contig_00045 unplaced-scaffold na na MKKV01000045.1 <> na Primary Assembly 116235 na TcG_8.4_contig_00046 unplaced-scaffold na na MKKV01000046.1 <> na Primary Assembly 115218 na TcG_8.4_contig_00047 unplaced-scaffold na na MKKV01000047.1 <> na Primary Assembly 114715 na TcG_8.4_contig_00048 unplaced-scaffold na na MKKV01000048.1 <> na Primary Assembly 113103 na TcG_8.4_contig_00049 unplaced-scaffold na na MKKV01000049.1 <> na Primary Assembly 113025 na TcG_8.4_contig_00050 unplaced-scaffold na na MKKV01000050.1 <> na Primary Assembly 108252 na TcG_8.4_contig_00051 unplaced-scaffold na na MKKV01000051.1 <> na Primary Assembly 105210 na TcG_8.4_contig_00052 unplaced-scaffold na na MKKV01000052.1 <> na Primary Assembly 104319 na TcG_8.4_contig_00053 unplaced-scaffold na na MKKV01000054.1 <> na Primary Assembly 101854 na TcG_8.4_contig_00054 unplaced-scaffold na na MKKV01000059.1 <> na Primary Assembly 99063 na TcG_8.4_contig_00055 unplaced-scaffold na na MKKV01000061.1 <> na Primary Assembly 98854 na TcG_8.4_contig_00056 unplaced-scaffold na na MKKV01000056.1 <> na Primary Assembly 100509 na TcG_8.4_contig_00057 unplaced-scaffold na na MKKV01000064.1 <> na Primary Assembly 97205 na TcG_8.4_contig_00058 unplaced-scaffold na na MKKV01000062.1 <> na Primary Assembly 97451 na TcG_8.4_contig_00059 unplaced-scaffold na na MKKV01000065.1 <> na Primary Assembly 97136 na TcG_8.4_contig_00060 unplaced-scaffold na na MKKV01000053.1 <> na Primary Assembly 102163 na TcG_8.4_contig_00061 unplaced-scaffold na na MKKV01000057.1 <> na Primary Assembly 99797 na TcG_8.4_contig_00062 unplaced-scaffold na na MKKV01000058.1 <> na Primary Assembly 99281 na TcG_8.4_contig_00063 unplaced-scaffold na na MKKV01000060.1 <> na Primary Assembly 98994 na TcG_8.4_contig_00064 unplaced-scaffold na na MKKV01000055.1 <> na Primary Assembly 101125 na TcG_8.4_contig_00065 unplaced-scaffold na na MKKV01000063.1 <> na Primary Assembly 97325 na TcG_8.4_contig_00066 unplaced-scaffold na na MKKV01000068.1 <> na Primary Assembly 93264 na TcG_8.4_contig_00067 unplaced-scaffold na na MKKV01000067.1 <> na Primary Assembly 94965 na TcG_8.4_contig_00068 unplaced-scaffold na na MKKV01000069.1 <> na Primary Assembly 93173 na TcG_8.4_contig_00069 unplaced-scaffold na na MKKV01000066.1 <> na Primary Assembly 95435 na TcG_8.4_contig_00070 unplaced-scaffold na na MKKV01000071.1 <> na Primary Assembly 89730 na TcG_8.4_contig_00071 unplaced-scaffold na na MKKV01000074.1 <> na Primary Assembly 88569 na TcG_8.4_contig_00072 unplaced-scaffold na na MKKV01000070.1 <> na Primary Assembly 90040 na TcG_8.4_contig_00073 unplaced-scaffold na na MKKV01000072.1 <> na Primary Assembly 88887 na TcG_8.4_contig_00074 unplaced-scaffold na na MKKV01000075.1 <> na Primary Assembly 87937 na TcG_8.4_contig_00075 unplaced-scaffold na na MKKV01000077.1 <> na Primary Assembly 85024 na TcG_8.4_contig_00076 unplaced-scaffold na na MKKV01000076.1 <> na Primary Assembly 86141 na TcG_8.4_contig_00077 unplaced-scaffold na na MKKV01000073.1 <> na Primary Assembly 88859 na TcG_8.4_contig_00078 unplaced-scaffold na na MKKV01000078.1 <> na Primary Assembly 83204 na TcG_8.4_contig_00079 unplaced-scaffold na na MKKV01000080.1 <> na Primary Assembly 79783 na TcG_8.4_contig_00080 unplaced-scaffold na na MKKV01000084.1 <> na Primary Assembly 77964 na TcG_8.4_contig_00081 unplaced-scaffold na na MKKV01000083.1 <> na Primary Assembly 78516 na TcG_8.4_contig_00082 unplaced-scaffold na na MKKV01000085.1 <> na Primary Assembly 77935 na TcG_8.4_contig_00083 unplaced-scaffold na na MKKV01000087.1 <> na Primary Assembly 77685 na TcG_8.4_contig_00084 unplaced-scaffold na na MKKV01000086.1 <> na Primary Assembly 77839 na TcG_8.4_contig_00085 unplaced-scaffold na na MKKV01000089.1 <> na Primary Assembly 76170 na TcG_8.4_contig_00086 unplaced-scaffold na na MKKV01000088.1 <> na Primary Assembly 77271 na TcG_8.4_contig_00087 unplaced-scaffold na na MKKV01000079.1 <> na Primary Assembly 79830 na TcG_8.4_contig_00088 unplaced-scaffold na na MKKV01000082.1 <> na Primary Assembly 78613 na TcG_8.4_contig_00089 unplaced-scaffold na na MKKV01000081.1 <> na Primary Assembly 78817 na TcG_8.4_contig_00090 unplaced-scaffold na na MKKV01000090.1 <> na Primary Assembly 75116 na TcG_8.4_contig_00091 unplaced-scaffold na na MKKV01000093.1 <> na Primary Assembly 73427 na TcG_8.4_contig_00092 unplaced-scaffold na na MKKV01000094.1 <> na Primary Assembly 72919 na TcG_8.4_contig_00093 unplaced-scaffold na na MKKV01000092.1 <> na Primary Assembly 73999 na TcG_8.4_contig_00094 unplaced-scaffold na na MKKV01000091.1 <> na Primary Assembly 74655 na TcG_8.4_contig_00095 unplaced-scaffold na na MKKV01000096.1 <> na Primary Assembly 72035 na TcG_8.4_contig_00096 unplaced-scaffold na na MKKV01000098.1 <> na Primary Assembly 71500 na TcG_8.4_contig_00097 unplaced-scaffold na na MKKV01000100.1 <> na Primary Assembly 70451 na TcG_8.4_contig_00098 unplaced-scaffold na na MKKV01000101.1 <> na Primary Assembly 69590 na TcG_8.4_contig_00099 unplaced-scaffold na na MKKV01000099.1 <> na Primary Assembly 71140 na TcG_8.4_contig_00100 unplaced-scaffold na na MKKV01000095.1 <> na Primary Assembly 72253 na TcG_8.4_contig_00101 unplaced-scaffold na na MKKV01000103.1 <> na Primary Assembly 68213 na TcG_8.4_contig_00102 unplaced-scaffold na na MKKV01000097.1 <> na Primary Assembly 71851 na TcG_8.4_contig_00103 unplaced-scaffold na na MKKV01000105.1 <> na Primary Assembly 67333 na TcG_8.4_contig_00104 unplaced-scaffold na na MKKV01000108.1 <> na Primary Assembly 66569 na TcG_8.4_contig_00105 unplaced-scaffold na na MKKV01000102.1 <> na Primary Assembly 68692 na TcG_8.4_contig_00106 unplaced-scaffold na na MKKV01000106.1 <> na Primary Assembly 67188 na TcG_8.4_contig_00107 unplaced-scaffold na na MKKV01000107.1 <> na Primary Assembly 66677 na TcG_8.4_contig_00108 unplaced-scaffold na na MKKV01000112.1 <> na Primary Assembly 65131 na TcG_8.4_contig_00109 unplaced-scaffold na na MKKV01000113.1 <> na Primary Assembly 64483 na TcG_8.4_contig_00110 unplaced-scaffold na na MKKV01000104.1 <> na Primary Assembly 67735 na TcG_8.4_contig_00111 unplaced-scaffold na na MKKV01000110.1 <> na Primary Assembly 65883 na TcG_8.4_contig_00112 unplaced-scaffold na na MKKV01000111.1 <> na Primary Assembly 65699 na TcG_8.4_contig_00113 unplaced-scaffold na na MKKV01000119.1 <> na Primary Assembly 62690 na TcG_8.4_contig_00114 unplaced-scaffold na na MKKV01000114.1 <> na Primary Assembly 63895 na TcG_8.4_contig_00115 unplaced-scaffold na na MKKV01000109.1 <> na Primary Assembly 66355 na TcG_8.4_contig_00116 unplaced-scaffold na na MKKV01000121.1 <> na Primary Assembly 62128 na TcG_8.4_contig_00117 unplaced-scaffold na na MKKV01000117.1 <> na Primary Assembly 62826 na TcG_8.4_contig_00118 unplaced-scaffold na na MKKV01000118.1 <> na Primary Assembly 62735 na TcG_8.4_contig_00119 unplaced-scaffold na na MKKV01000116.1 <> na Primary Assembly 63263 na TcG_8.4_contig_00120 unplaced-scaffold na na MKKV01000120.1 <> na Primary Assembly 62534 na TcG_8.4_contig_00121 unplaced-scaffold na na MKKV01000115.1 <> na Primary Assembly 63358 na TcG_8.4_contig_00122 unplaced-scaffold na na MKKV01000123.1 <> na Primary Assembly 59816 na TcG_8.4_contig_00123 unplaced-scaffold na na MKKV01000124.1 <> na Primary Assembly 58744 na TcG_8.4_contig_00124 unplaced-scaffold na na MKKV01000122.1 <> na Primary Assembly 59963 na TcG_8.4_contig_00125 unplaced-scaffold na na MKKV01000129.1 <> na Primary Assembly 56627 na TcG_8.4_contig_00126 unplaced-scaffold na na MKKV01000127.1 <> na Primary Assembly 57263 na TcG_8.4_contig_00127 unplaced-scaffold na na MKKV01000125.1 <> na Primary Assembly 58025 na TcG_8.4_contig_00128 unplaced-scaffold na na MKKV01000131.1 <> na Primary Assembly 56308 na TcG_8.4_contig_00129 unplaced-scaffold na na MKKV01000128.1 <> na Primary Assembly 56638 na TcG_8.4_contig_00130 unplaced-scaffold na na MKKV01000132.1 <> na Primary Assembly 55480 na TcG_8.4_contig_00131 unplaced-scaffold na na MKKV01000133.1 <> na Primary Assembly 53903 na TcG_8.4_contig_00132 unplaced-scaffold na na MKKV01000126.1 <> na Primary Assembly 57424 na TcG_8.4_contig_00133 unplaced-scaffold na na MKKV01000134.1 <> na Primary Assembly 53681 na TcG_8.4_contig_00134 unplaced-scaffold na na MKKV01000137.1 <> na Primary Assembly 52577 na TcG_8.4_contig_00135 unplaced-scaffold na na MKKV01000130.1 <> na Primary Assembly 56611 na TcG_8.4_contig_00136 unplaced-scaffold na na MKKV01000136.1 <> na Primary Assembly 53292 na TcG_8.4_contig_00137 unplaced-scaffold na na MKKV01000139.1 <> na Primary Assembly 51364 na TcG_8.4_contig_00138 unplaced-scaffold na na MKKV01000141.1 <> na Primary Assembly 50754 na TcG_8.4_contig_00139 unplaced-scaffold na na MKKV01000140.1 <> na Primary Assembly 51159 na TcG_8.4_contig_00140 unplaced-scaffold na na MKKV01000142.1 <> na Primary Assembly 50220 na TcG_8.4_contig_00141 unplaced-scaffold na na MKKV01000138.1 <> na Primary Assembly 52026 na TcG_8.4_contig_00142 unplaced-scaffold na na MKKV01000135.1 <> na Primary Assembly 53671 na TcG_8.4_contig_00143 unplaced-scaffold na na MKKV01000144.1 <> na Primary Assembly 49506 na TcG_8.4_contig_00144 unplaced-scaffold na na MKKV01000143.1 <> na Primary Assembly 49904 na TcG_8.4_contig_00145 unplaced-scaffold na na MKKV01000146.1 <> na Primary Assembly 49408 na TcG_8.4_contig_00146 unplaced-scaffold na na MKKV01000150.1 <> na Primary Assembly 47416 na TcG_8.4_contig_00147 unplaced-scaffold na na MKKV01000149.1 <> na Primary Assembly 47564 na TcG_8.4_contig_00148 unplaced-scaffold na na MKKV01000147.1 <> na Primary Assembly 49239 na TcG_8.4_contig_00149 unplaced-scaffold na na MKKV01000145.1 <> na Primary Assembly 49467 na TcG_8.4_contig_00150 unplaced-scaffold na na MKKV01000154.1 <> na Primary Assembly 46444 na TcG_8.4_contig_00151 unplaced-scaffold na na MKKV01000151.1 <> na Primary Assembly 47167 na TcG_8.4_contig_00152 unplaced-scaffold na na MKKV01000157.1 <> na Primary Assembly 45450 na TcG_8.4_contig_00153 unplaced-scaffold na na MKKV01000155.1 <> na Primary Assembly 45851 na TcG_8.4_contig_00154 unplaced-scaffold na na MKKV01000156.1 <> na Primary Assembly 45561 na TcG_8.4_contig_00155 unplaced-scaffold na na MKKV01000152.1 <> na Primary Assembly 46494 na TcG_8.4_contig_00156 unplaced-scaffold na na MKKV01000159.1 <> na Primary Assembly 43448 na TcG_8.4_contig_00157 unplaced-scaffold na na MKKV01000153.1 <> na Primary Assembly 46494 na TcG_8.4_contig_00158 unplaced-scaffold na na MKKV01000158.1 <> na Primary Assembly 45204 na TcG_8.4_contig_00159 unplaced-scaffold na na MKKV01000148.1 <> na Primary Assembly 48145 na TcG_8.4_contig_00160 unplaced-scaffold na na MKKV01000163.1 <> na Primary Assembly 41239 na TcG_8.4_contig_00161 unplaced-scaffold na na MKKV01000162.1 <> na Primary Assembly 41334 na TcG_8.4_contig_00162 unplaced-scaffold na na MKKV01000160.1 <> na Primary Assembly 41794 na TcG_8.4_contig_00163 unplaced-scaffold na na MKKV01000165.1 <> na Primary Assembly 40751 na TcG_8.4_contig_00164 unplaced-scaffold na na MKKV01000166.1 <> na Primary Assembly 40481 na TcG_8.4_contig_00165 unplaced-scaffold na na MKKV01000169.1 <> na Primary Assembly 40028 na TcG_8.4_contig_00166 unplaced-scaffold na na MKKV01000171.1 <> na Primary Assembly 39524 na TcG_8.4_contig_00167 unplaced-scaffold na na MKKV01000172.1 <> na Primary Assembly 39435 na TcG_8.4_contig_00168 unplaced-scaffold na na MKKV01000167.1 <> na Primary Assembly 40468 na TcG_8.4_contig_00169 unplaced-scaffold na na MKKV01000161.1 <> na Primary Assembly 41656 na TcG_8.4_contig_00170 unplaced-scaffold na na MKKV01000170.1 <> na Primary Assembly 39528 na TcG_8.4_contig_00171 unplaced-scaffold na na MKKV01000168.1 <> na Primary Assembly 40322 na TcG_8.4_contig_00172 unplaced-scaffold na na MKKV01000174.1 <> na Primary Assembly 38926 na TcG_8.4_contig_00173 unplaced-scaffold na na MKKV01000178.1 <> na Primary Assembly 37520 na TcG_8.4_contig_00174 unplaced-scaffold na na MKKV01000176.1 <> na Primary Assembly 37951 na TcG_8.4_contig_00175 unplaced-scaffold na na MKKV01000175.1 <> na Primary Assembly 37970 na TcG_8.4_contig_00176 unplaced-scaffold na na MKKV01000177.1 <> na Primary Assembly 37919 na TcG_8.4_contig_00177 unplaced-scaffold na na MKKV01000181.1 <> na Primary Assembly 35659 na TcG_8.4_contig_00178 unplaced-scaffold na na MKKV01000180.1 <> na Primary Assembly 35751 na TcG_8.4_contig_00179 unplaced-scaffold na na MKKV01000179.1 <> na Primary Assembly 36161 na TcG_8.4_contig_00180 unplaced-scaffold na na MKKV01000164.1 <> na Primary Assembly 41237 na TcG_8.4_contig_00181 unplaced-scaffold na na MKKV01000173.1 <> na Primary Assembly 39176 na TcG_8.4_contig_00182 unplaced-scaffold na na MKKV01000183.1 <> na Primary Assembly 34690 na TcG_8.4_contig_00183 unplaced-scaffold na na MKKV01000182.1 <> na Primary Assembly 34876 na TcG_8.4_contig_00184 unplaced-scaffold na na MKKV01000189.1 <> na Primary Assembly 33129 na TcG_8.4_contig_00185 unplaced-scaffold na na MKKV01000185.1 <> na Primary Assembly 33992 na TcG_8.4_contig_00186 unplaced-scaffold na na MKKV01000184.1 <> na Primary Assembly 34249 na TcG_8.4_contig_00187 unplaced-scaffold na na MKKV01000186.1 <> na Primary Assembly 33800 na TcG_8.4_contig_00188 unplaced-scaffold na na MKKV01000187.1 <> na Primary Assembly 33440 na TcG_8.4_contig_00189 unplaced-scaffold na na MKKV01000188.1 <> na Primary Assembly 33373 na TcG_8.4_contig_00190 unplaced-scaffold na na MKKV01000194.1 <> na Primary Assembly 31581 na TcG_8.4_contig_00191 unplaced-scaffold na na MKKV01000192.1 <> na Primary Assembly 32291 na TcG_8.4_contig_00192 unplaced-scaffold na na MKKV01000193.1 <> na Primary Assembly 32041 na TcG_8.4_contig_00193 unplaced-scaffold na na MKKV01000195.1 <> na Primary Assembly 31170 na 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