# Assembly name: Pldbra_eH_r1 # Organism name: Plasmodiophora brassicae (eukaryotes) # Infraspecific name: strain=eH # Taxid: 37360 # BioSample: SAMN08196759 # BioProject: PRJNA422793 # Submitter: IGEPP # Date: 2018-11-26 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: POCA01 # Assembly method: SOAPdenovo v. 2.04; SOAPGapCloser v. 1.12; Lynx v. 2013 # Expected final version: yes # Genome coverage: 300.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_003833335.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003833345.1 Primary Assembly ## GCA_003833355.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Pldbra_eH_r1s001 unplaced-scaffold na na POCA01000001.1 <> na Primary Assembly 1480576 na Pldbra_eH_r1s002 unplaced-scaffold na na POCA01000002.1 <> na Primary Assembly 1269503 na Pldbra_eH_r1s003 unplaced-scaffold na na POCA01000003.1 <> na Primary Assembly 1250787 na Pldbra_eH_r1s004 unplaced-scaffold na na POCA01000004.1 <> na Primary Assembly 1164445 na Pldbra_eH_r1s005 unplaced-scaffold na na POCA01000005.1 <> na Primary Assembly 1133812 na Pldbra_eH_r1s006 unplaced-scaffold na na POCA01000006.1 <> na Primary Assembly 1008599 na Pldbra_eH_r1s007 unplaced-scaffold na na POCA01000007.1 <> na Primary Assembly 953152 na Pldbra_eH_r1s008 unplaced-scaffold na na POCA01000008.1 <> na Primary Assembly 918299 na Pldbra_eH_r1s009 unplaced-scaffold na na POCA01000009.1 <> na Primary Assembly 868400 na Pldbra_eH_r1s010 unplaced-scaffold na na POCA01000010.1 <> na Primary Assembly 812600 na Pldbra_eH_r1s011 unplaced-scaffold na na POCA01000011.1 <> na Primary Assembly 742833 na Pldbra_eH_r1s012 unplaced-scaffold na na POCA01000012.1 <> na Primary Assembly 741293 na Pldbra_eH_r1s013 unplaced-scaffold na na POCA01000013.1 <> na Primary Assembly 717522 na Pldbra_eH_r1s014 unplaced-scaffold na na POCA01000014.1 <> na Primary Assembly 701069 na Pldbra_eH_r1s015 unplaced-scaffold na na POCA01000015.1 <> na Primary Assembly 690028 na Pldbra_eH_r1s016 unplaced-scaffold na na POCA01000016.1 <> na Primary Assembly 666027 na Pldbra_eH_r1s017 unplaced-scaffold na na POCA01000017.1 <> na Primary Assembly 651253 na Pldbra_eH_r1s018 unplaced-scaffold na na POCA01000018.1 <> na Primary Assembly 550626 na Pldbra_eH_r1s019 unplaced-scaffold na na POCA01000019.1 <> na Primary Assembly 513541 na Pldbra_eH_r1s020 unplaced-scaffold na na POCA01000020.1 <> na Primary Assembly 477137 na Pldbra_eH_r1s021 unplaced-scaffold na na POCA01000021.1 <> na Primary Assembly 472728 na Pldbra_eH_r1s022 unplaced-scaffold na na POCA01000022.1 <> na Primary Assembly 449039 na Pldbra_eH_r1s023 unplaced-scaffold na na POCA01000023.1 <> na Primary Assembly 439224 na Pldbra_eH_r1s024 unplaced-scaffold na na POCA01000024.1 <> na Primary Assembly 429983 na Pldbra_eH_r1s025 unplaced-scaffold na na POCA01000025.1 <> na Primary Assembly 420254 na Pldbra_eH_r1s026 unplaced-scaffold na na POCA01000026.1 <> na Primary Assembly 391313 na Pldbra_eH_r1s027 unplaced-scaffold na na POCA01000027.1 <> na Primary Assembly 371021 na Pldbra_eH_r1s028 unplaced-scaffold na na POCA01000028.1 <> na Primary Assembly 367316 na Pldbra_eH_r1s029 unplaced-scaffold na na POCA01000029.1 <> na Primary Assembly 356802 na Pldbra_eH_r1s030 unplaced-scaffold na na POCA01000030.1 <> na Primary Assembly 282158 na Pldbra_eH_r1s031 unplaced-scaffold na na POCA01000031.1 <> na Primary Assembly 244130 na Pldbra_eH_r1s032 unplaced-scaffold na na POCA01000032.1 <> na Primary Assembly 218873 na Pldbra_eH_r1s033 unplaced-scaffold na na POCA01000033.1 <> na Primary Assembly 209601 na Pldbra_eH_r1s034 unplaced-scaffold na na POCA01000034.1 <> na Primary Assembly 193210 na Pldbra_eH_r1s035 unplaced-scaffold na na POCA01000035.1 <> na Primary Assembly 191317 na Pldbra_eH_r1s036 unplaced-scaffold na na POCA01000036.1 <> na Primary Assembly 173126 na Pldbra_eH_r1s037 unplaced-scaffold na na POCA01000037.1 <> na Primary Assembly 158170 na Pldbra_eH_r1s038 unplaced-scaffold na na POCA01000038.1 <> na Primary Assembly 151204 na Pldbra_eH_r1s039 unplaced-scaffold na na POCA01000039.1 <> na Primary Assembly 148653 na Pldbra_eH_r1s040 unplaced-scaffold na na POCA01000040.1 <> na Primary Assembly 124534 na Pldbra_eH_r1s041 unplaced-scaffold na na POCA01000041.1 <> na Primary Assembly 114845 na Pldbra_eH_r1s042 unplaced-scaffold na na POCA01000042.1 <> na Primary Assembly 104384 na Pldbra_eH_r1s044 unplaced-scaffold na na POCA01000044.1 <> na Primary Assembly 100478 na Pldbra_eH_r1s045 unplaced-scaffold na na POCA01000045.1 <> na Primary Assembly 96702 na Pldbra_eH_r1s046 unplaced-scaffold na na POCA01000046.1 <> na Primary Assembly 85210 na Pldbra_eH_r1s047 unplaced-scaffold na na POCA01000047.1 <> na Primary Assembly 80450 na Pldbra_eH_r1s048 unplaced-scaffold na na POCA01000048.1 <> na Primary Assembly 75102 na Pldbra_eH_r1s049 unplaced-scaffold na na POCA01000049.1 <> na Primary Assembly 55471 na Pldbra_eH_r1s050 unplaced-scaffold na na POCA01000050.1 <> na Primary Assembly 53919 na Pldbra_eH_r1s051 unplaced-scaffold na na POCA01000051.1 <> na Primary Assembly 47297 na Pldbra_eH_r1s052 unplaced-scaffold na na POCA01000052.1 <> na Primary Assembly 47285 na Pldbra_eH_r1s053 unplaced-scaffold na na POCA01000053.1 <> na Primary Assembly 36361 na Pldbra_eH_r1s054 unplaced-scaffold na na POCA01000054.1 <> na Primary Assembly 34153 na Pldbra_eH_r1s055 unplaced-scaffold na na POCA01000055.1 <> na Primary Assembly 26815 na Pldbra_eH_r1s056 unplaced-scaffold na na POCA01000056.1 <> na Primary Assembly 21227 na Pldbra_eH_r1s057 unplaced-scaffold na na POCA01000057.1 <> na Primary Assembly 18762 na Pldbra_eH_r1s058 unplaced-scaffold na na POCA01000058.1 <> na Primary Assembly 18232 na Pldbra_eH_r1s059 unplaced-scaffold na na POCA01000059.1 <> na Primary Assembly 17338 na Pldbra_eH_r1s060 unplaced-scaffold na na POCA01000060.1 <> na Primary Assembly 15681 na Pldbra_eH_r1s061 unplaced-scaffold na na POCA01000061.1 <> na Primary Assembly 14919 na Pldbra_eH_r1s062 unplaced-scaffold na na POCA01000062.1 <> na Primary Assembly 14912 na Pldbra_eH_r1s063 unplaced-scaffold na na POCA01000063.1 <> na Primary Assembly 14747 na Pldbra_eH_r1s064 unplaced-scaffold na na POCA01000064.1 <> na Primary Assembly 14442 na Pldbra_eH_r1s065 unplaced-scaffold na na POCA01000065.1 <> na Primary Assembly 14285 na Pldbra_eH_r1s066 unplaced-scaffold na na POCA01000066.1 <> na Primary Assembly 12734 na Pldbra_eH_r1s067 unplaced-scaffold na na POCA01000067.1 <> na Primary Assembly 12106 na Pldbra_eH_r1s068 unplaced-scaffold na na POCA01000068.1 <> na Primary Assembly 11963 na Pldbra_eH_r1s069 unplaced-scaffold na na POCA01000069.1 <> na Primary Assembly 11351 na Pldbra_eH_r1s070 unplaced-scaffold na na POCA01000070.1 <> na Primary Assembly 10564 na Pldbra_eH_r1s071 unplaced-scaffold na na POCA01000071.1 <> na Primary Assembly 10157 na Pldbra_eH_r1s072 unplaced-scaffold na na POCA01000072.1 <> na Primary Assembly 8916 na Pldbra_eH_r1s073 unplaced-scaffold na na POCA01000073.1 <> na Primary Assembly 8514 na Pldbra_eH_r1s074 unplaced-scaffold na na POCA01000074.1 <> na Primary Assembly 8482 na Pldbra_eH_r1s075 unplaced-scaffold na na POCA01000075.1 <> na Primary Assembly 8423 na Pldbra_eH_r1s076 unplaced-scaffold na na POCA01000076.1 <> na Primary Assembly 7540 na Pldbra_eH_r1s077 unplaced-scaffold na na POCA01000077.1 <> na Primary Assembly 7167 na Pldbra_eH_r1s078 unplaced-scaffold na na POCA01000078.1 <> na Primary Assembly 7148 na Pldbra_eH_r1s079 unplaced-scaffold na na POCA01000079.1 <> na Primary Assembly 6420 na Pldbra_eH_r1s080 unplaced-scaffold na na POCA01000080.1 <> na Primary Assembly 6369 na Pldbra_eH_r1s081 unplaced-scaffold na na POCA01000081.1 <> na Primary Assembly 6254 na Pldbra_eH_r1s082 unplaced-scaffold na na POCA01000082.1 <> na Primary Assembly 5952 na Pldbra_eH_r1s083 unplaced-scaffold na na POCA01000083.1 <> na Primary Assembly 5791 na Pldbra_eH_r1s088 unplaced-scaffold na na POCA01000084.1 <> na Primary Assembly 4530 na Pldbra_eH_r1s089 unplaced-scaffold na na POCA01000085.1 <> na Primary Assembly 4443 na Pldbra_eH_r1s090 unplaced-scaffold na na POCA01000086.1 <> na Primary Assembly 4442 na Pldbra_eH_r1s091 unplaced-scaffold na na POCA01000087.1 <> na Primary Assembly 4280 na Pldbra_eH_r1s092 unplaced-scaffold na na POCA01000088.1 <> na Primary Assembly 4185 na Pldbra_eH_r1s096 unplaced-scaffold na na POCA01000089.1 <> na Primary Assembly 3139 na Pldbra_eH_r1s097 unplaced-scaffold na na POCA01000090.1 <> na Primary Assembly 2963 na Pldbra_eH_r1s098 unplaced-scaffold na na POCA01000091.1 <> na Primary Assembly 2830 na Pldbra_eH_r1s099 unplaced-scaffold na na POCA01000092.1 <> na Primary Assembly 2759 na Pldbra_eH_r1s100 unplaced-scaffold na na POCA01000093.1 <> na Primary Assembly 2375 na Pldbra_eH_r1s102 unplaced-scaffold na na POCA01000094.1 <> na Primary Assembly 2093 na Pldbra_eH_r1s109 unplaced-scaffold na na POCA01000095.1 <> na Primary Assembly 1805 na Pldbra_eH_r1s112 unplaced-scaffold na na POCA01000096.1 <> na Primary Assembly 1608 na Pldbra_eH_r1s116 unplaced-scaffold na na POCA01000097.1 <> na Primary Assembly 1511 na Pldbra_eH_r1s120 unplaced-scaffold na na POCA01000098.1 <> na Primary Assembly 1388 na Pldbra_eH_r1s122 unplaced-scaffold na na POCA01000099.1 <> na Primary Assembly 1332 na Pldbra_eH_r1s123 unplaced-scaffold na na POCA01000100.1 <> na Primary Assembly 1281 na Pldbra_eH_r1s126 unplaced-scaffold na na POCA01000101.1 <> na Primary Assembly 1185 na Pldbra_eH_r1s127 unplaced-scaffold na na POCA01000102.1 <> na Primary Assembly 1178 na Pldbra_eH_r1s129 unplaced-scaffold na na POCA01000103.1 <> na Primary Assembly 1155 na Pldbra_eH_r1s130 unplaced-scaffold na na POCA01000104.1 <> na Primary Assembly 1129 na Pldbra_eH_r1s131 unplaced-scaffold na na POCA01000105.1 <> na Primary Assembly 1109 na Pldbra_eH_r1s139 unplaced-scaffold na na POCA01000106.1 <> na Primary Assembly 959 na Pldbra_eH_r1s141 unplaced-scaffold na na POCA01000107.1 <> na Primary Assembly 940 na Pldbra_eH_r1s144 unplaced-scaffold na na POCA01000108.1 <> na Primary Assembly 918 na Pldbra_eH_r1s150 unplaced-scaffold na na POCA01000109.1 <> na Primary Assembly 870 na Pldbra_eH_r1s153 unplaced-scaffold na na POCA01000110.1 <> na Primary Assembly 834 na Pldbra_eH_r1s154 unplaced-scaffold na na POCA01000111.1 <> na Primary Assembly 829 na Pldbra_eH_r1s168 unplaced-scaffold na na POCA01000112.1 <> na Primary Assembly 753 na Pldbra_eH_r1s171 unplaced-scaffold na na POCA01000113.1 <> na Primary Assembly 724 na Pldbra_eH_r1s174 unplaced-scaffold na na POCA01000114.1 <> na Primary Assembly 713 na Pldbra_eH_r1s176 unplaced-scaffold na na POCA01000115.1 <> na Primary Assembly 700 na Pldbra_eH_r1s179 unplaced-scaffold na na POCA01000116.1 <> na Primary Assembly 691 na Pldbra_eH_r1s183 unplaced-scaffold na na POCA01000117.1 <> na Primary Assembly 677 na Pldbra_eH_r1s185 unplaced-scaffold na na POCA01000118.1 <> na Primary Assembly 668 na Pldbra_eH_r1s187 unplaced-scaffold na na POCA01000119.1 <> na Primary Assembly 662 na Pldbra_eH_r1s188 unplaced-scaffold na na POCA01000120.1 <> na Primary Assembly 661 na Pldbra_eH_r1s191 unplaced-scaffold na na POCA01000121.1 <> na Primary Assembly 652 na Pldbra_eH_r1s195 unplaced-scaffold na na POCA01000122.1 <> na Primary Assembly 634 na Pldbra_eH_r1s198 unplaced-scaffold na na POCA01000123.1 <> na Primary Assembly 622 na Pldbra_eH_r1s202 unplaced-scaffold na na POCA01000124.1 <> na Primary Assembly 613 na Pldbra_eH_r1s205 unplaced-scaffold na na POCA01000125.1 <> na Primary Assembly 608 na Pldbra_eH_r1s206 unplaced-scaffold na na POCA01000126.1 <> na Primary Assembly 607 na Pldbra_eH_r1s209 unplaced-scaffold na na POCA01000127.1 <> na Primary Assembly 588 na Pldbra_eH_r1s210 unplaced-scaffold na na POCA01000128.1 <> na Primary Assembly 587 na Pldbra_eH_r1s214 unplaced-scaffold na na POCA01000129.1 <> na Primary Assembly 574 na Pldbra_eH_r1s216 unplaced-scaffold na na POCA01000130.1 <> na Primary Assembly 573 na Pldbra_eH_r1s217 unplaced-scaffold na na POCA01000131.1 <> na Primary Assembly 572 na Pldbra_eH_r1s221 unplaced-scaffold na na POCA01000132.1 <> na Primary Assembly 564 na Pldbra_eH_r1s222 unplaced-scaffold na na POCA01000133.1 <> na Primary Assembly 564 na Pldbra_eH_r1s226 unplaced-scaffold na na POCA01000134.1 <> na Primary Assembly 544 na Pldbra_eH_r1s236 unplaced-scaffold na na POCA01000135.1 <> na Primary Assembly 518 na Pldbra_eH_r1s242 unplaced-scaffold na na POCA01000136.1 <> na Primary Assembly 509 na Pldbra_eH_r1s043 unlocalized-scaffold MT Mitochondrion POCA01000043.1 <> na non-nuclear 102962 na