# Assembly name: Cimm211_ragoo # Organism name: Coccidioides immitis (ascomycete fungi) # Infraspecific name: strain=WA_211 # Taxid: 5501 # BioSample: SAMN02786853 # BioProject: PRJNA245906 # Submitter: TGen North # Date: 2019-07-01 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: RHJW02 # Assembly method: SPAdes v. 3.13.1; shovill v. 1.0.4; AAFTF v. 0.2.3; RaGOO v. 1.1; Pilon v. 1.22 # Expected final version: yes # Genome coverage: 62.0x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_004115165.2 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004115205.2 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1 unplaced-scaffold na na RHJW02000001.1 <> na Primary Assembly 8245356 na scaffold_10 unplaced-scaffold na na RHJW02000010.1 <> na Primary Assembly 1018 na scaffold_11 unplaced-scaffold na na RHJW02000011.1 <> na Primary Assembly 980 na scaffold_12 unplaced-scaffold na na RHJW02000012.1 <> na Primary Assembly 968 na scaffold_13 unplaced-scaffold na na RHJW02000013.1 <> na Primary Assembly 920 na scaffold_14 unplaced-scaffold na na RHJW02000014.1 <> na Primary Assembly 826 na scaffold_15 unplaced-scaffold na na RHJW02000015.1 <> na Primary Assembly 819 na scaffold_16 unplaced-scaffold na na RHJW02000016.1 <> na Primary Assembly 819 na scaffold_17 unplaced-scaffold na na RHJW02000017.1 <> na Primary Assembly 808 na scaffold_18 unplaced-scaffold na na RHJW02000018.1 <> na Primary Assembly 787 na scaffold_19 unplaced-scaffold na na RHJW02000019.1 <> na Primary Assembly 779 na scaffold_2 unplaced-scaffold na na RHJW02000002.1 <> na Primary Assembly 4983804 na scaffold_20 unplaced-scaffold na na RHJW02000020.1 <> na Primary Assembly 774 na scaffold_21 unplaced-scaffold na na RHJW02000021.1 <> na Primary Assembly 766 na scaffold_22 unplaced-scaffold na na RHJW02000022.1 <> na Primary Assembly 755 na scaffold_23 unplaced-scaffold na na RHJW02000023.1 <> na Primary Assembly 751 na scaffold_24 unplaced-scaffold na na RHJW02000024.1 <> na Primary Assembly 744 na scaffold_25 unplaced-scaffold na na RHJW02000025.1 <> na Primary Assembly 744 na scaffold_26 unplaced-scaffold na na RHJW02000026.1 <> na Primary Assembly 725 na scaffold_27 unplaced-scaffold na na RHJW02000027.1 <> na Primary Assembly 703 na scaffold_28 unplaced-scaffold na na RHJW02000028.1 <> na Primary Assembly 703 na scaffold_29 unplaced-scaffold na na RHJW02000029.1 <> na Primary Assembly 701 na scaffold_3 unplaced-scaffold na na RHJW02000003.1 <> na Primary Assembly 3797145 na scaffold_30 unplaced-scaffold na na RHJW02000030.1 <> na Primary Assembly 701 na scaffold_31 unplaced-scaffold na na RHJW02000031.1 <> na Primary Assembly 669 na scaffold_32 unplaced-scaffold na na RHJW02000032.1 <> na Primary Assembly 655 na scaffold_33 unplaced-scaffold na na RHJW02000033.1 <> na Primary Assembly 654 na scaffold_34 unplaced-scaffold na na RHJW02000034.1 <> na Primary Assembly 648 na scaffold_35 unplaced-scaffold na na RHJW02000035.1 <> na Primary Assembly 645 na scaffold_36 unplaced-scaffold na na RHJW02000036.1 <> na Primary Assembly 641 na scaffold_37 unplaced-scaffold na na RHJW02000037.1 <> na Primary Assembly 640 na scaffold_38 unplaced-scaffold na na RHJW02000038.1 <> na Primary Assembly 639 na scaffold_39 unplaced-scaffold na na RHJW02000039.1 <> na Primary Assembly 621 na scaffold_4 unplaced-scaffold na na RHJW02000004.1 <> na Primary Assembly 3706976 na scaffold_40 unplaced-scaffold na na RHJW02000040.1 <> na Primary Assembly 616 na scaffold_41 unplaced-scaffold na na RHJW02000041.1 <> na Primary Assembly 612 na scaffold_42 unplaced-scaffold na na RHJW02000042.1 <> na Primary Assembly 607 na scaffold_43 unplaced-scaffold na na RHJW02000043.1 <> na Primary Assembly 606 na scaffold_44 unplaced-scaffold na na RHJW02000044.1 <> na Primary Assembly 599 na scaffold_45 unplaced-scaffold na na RHJW02000045.1 <> na Primary Assembly 597 na scaffold_46 unplaced-scaffold na na RHJW02000046.1 <> na Primary Assembly 595 na scaffold_47 unplaced-scaffold na na RHJW02000047.1 <> na Primary Assembly 595 na scaffold_48 unplaced-scaffold na na RHJW02000048.1 <> na Primary Assembly 585 na scaffold_49 unplaced-scaffold na na RHJW02000049.1 <> na Primary Assembly 577 na scaffold_5 unplaced-scaffold na na RHJW02000005.1 <> na Primary Assembly 3322502 na scaffold_50 unplaced-scaffold na na RHJW02000050.1 <> na Primary Assembly 573 na scaffold_51 unplaced-scaffold na na RHJW02000051.1 <> na Primary Assembly 567 na scaffold_52 unplaced-scaffold na na RHJW02000052.1 <> na Primary Assembly 560 na scaffold_53 unplaced-scaffold na na RHJW02000053.1 <> na Primary Assembly 558 na scaffold_54 unplaced-scaffold na na RHJW02000054.1 <> na Primary Assembly 556 na scaffold_55 unplaced-scaffold na na RHJW02000055.1 <> na Primary Assembly 555 na scaffold_56 unplaced-scaffold na na RHJW02000056.1 <> na Primary Assembly 550 na scaffold_57 unplaced-scaffold na na RHJW02000057.1 <> na Primary Assembly 544 na scaffold_58 unplaced-scaffold na na RHJW02000058.1 <> na Primary Assembly 537 na scaffold_59 unplaced-scaffold na na RHJW02000059.1 <> na Primary Assembly 520 na scaffold_6 unplaced-scaffold na na RHJW02000006.1 <> na Primary Assembly 3274131 na scaffold_60 unplaced-scaffold na na RHJW02000060.1 <> na Primary Assembly 518 na scaffold_61 unplaced-scaffold na na RHJW02000061.1 <> na Primary Assembly 518 na scaffold_62 unplaced-scaffold na na RHJW02000062.1 <> na Primary Assembly 516 na scaffold_7 unplaced-scaffold na na RHJW02000007.1 <> na Primary Assembly 107257 na scaffold_8 unplaced-scaffold na na RHJW02000008.1 <> na Primary Assembly 1038 na scaffold_9 unplaced-scaffold na na RHJW02000009.1 <> na Primary Assembly 1020 na