# Assembly name: UKP15.v0 # Organism name: Cryptosporidium parvum (apicomplexans) # Infraspecific name: strain=UKP15 # Taxid: 5807 # BioSample: SAMN08383023 # BioProject: PRJNA315507 # Submitter: Public Health Wales (Microbiology) # Date: 2019-03-11 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: PVQE01 # Assembly method: SPAdes v. 3.5.0 # Expected final version: no # Genome coverage: 142.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_004337875.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004337905.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scf_1 unplaced-scaffold na na PVQE01000001.1 <> na Primary Assembly 1295034 na scf_10 unplaced-scaffold na na PVQE01000010.1 <> na Primary Assembly 196607 na scf_101 unplaced-scaffold na na PVQE01000094.1 <> na Primary Assembly 497 na scf_103 unplaced-scaffold na na PVQE01000095.1 <> na Primary Assembly 508 na scf_104 unplaced-scaffold na na PVQE01000096.1 <> na Primary Assembly 508 na scf_106 unplaced-scaffold na na PVQE01000097.1 <> na Primary Assembly 512 na scf_107 unplaced-scaffold na na PVQE01000098.1 <> na Primary Assembly 435 na scf_108 unplaced-scaffold na na PVQE01000099.1 <> na Primary Assembly 376 na scf_109 unplaced-scaffold na na PVQE01000100.1 <> na Primary Assembly 344 na scf_11 unplaced-scaffold na na PVQE01000011.1 <> na Primary Assembly 183595 na scf_110 unplaced-scaffold na na PVQE01000101.1 <> na Primary Assembly 515 na scf_111 unplaced-scaffold na na PVQE01000102.1 <> na Primary Assembly 418 na scf_112 unplaced-scaffold na na PVQE01000103.1 <> na Primary Assembly 450 na scf_113 unplaced-scaffold na na PVQE01000104.1 <> na Primary Assembly 374 na scf_114 unplaced-scaffold na na PVQE01000105.1 <> na Primary Assembly 518 na scf_115 unplaced-scaffold na na PVQE01000106.1 <> na Primary Assembly 293 na scf_116 unplaced-scaffold na na PVQE01000107.1 <> na Primary Assembly 520 na scf_118 unplaced-scaffold na na PVQE01000108.1 <> na Primary Assembly 530 na scf_119 unplaced-scaffold na na PVQE01000109.1 <> na Primary Assembly 252 na scf_12 unplaced-scaffold na na PVQE01000012.1 <> na Primary Assembly 145128 na scf_120 unplaced-scaffold na na PVQE01000110.1 <> na Primary Assembly 599 na scf_121 unplaced-scaffold na na PVQE01000111.1 <> na Primary Assembly 438 na scf_122 unplaced-scaffold na na PVQE01000112.1 <> na Primary Assembly 458 na scf_123 unplaced-scaffold na na PVQE01000113.1 <> na Primary Assembly 502 na scf_124 unplaced-scaffold na na PVQE01000114.1 <> na Primary Assembly 385 na scf_125 unplaced-scaffold na na PVQE01000115.1 <> na Primary Assembly 535 na scf_127 unplaced-scaffold na na PVQE01000116.1 <> na Primary Assembly 425 na scf_128 unplaced-scaffold na na PVQE01000117.1 <> na Primary Assembly 546 na scf_129 unplaced-scaffold na na PVQE01000118.1 <> na Primary Assembly 547 na scf_13 unplaced-scaffold na na PVQE01000013.1 <> na Primary Assembly 101486 na scf_130 unplaced-scaffold na na PVQE01000119.1 <> na Primary Assembly 547 na scf_131 unplaced-scaffold na na PVQE01000120.1 <> na Primary Assembly 551 na scf_132 unplaced-scaffold na na PVQE01000121.1 <> na Primary Assembly 541 na scf_133 unplaced-scaffold na na PVQE01000122.1 <> na Primary Assembly 505 na scf_134 unplaced-scaffold na na PVQE01000123.1 <> na Primary Assembly 511 na scf_135 unplaced-scaffold na na PVQE01000124.1 <> na Primary Assembly 530 na scf_136 unplaced-scaffold na na PVQE01000125.1 <> na Primary Assembly 517 na scf_14 unplaced-scaffold na na PVQE01000014.1 <> na Primary Assembly 92921 na scf_15 unplaced-scaffold na na PVQE01000015.1 <> na Primary Assembly 84121 na scf_16 unplaced-scaffold na na PVQE01000016.1 <> na Primary Assembly 30457 na scf_17 unplaced-scaffold na na PVQE01000017.1 <> na Primary Assembly 18204 na scf_18 unplaced-scaffold na na PVQE01000018.1 <> na Primary Assembly 17760 na scf_19 unplaced-scaffold na na PVQE01000019.1 <> na Primary Assembly 454 na scf_2 unplaced-scaffold na na PVQE01000002.1 <> na Primary Assembly 1246883 na scf_20 unplaced-scaffold na na PVQE01000020.1 <> na Primary Assembly 563 na scf_21 unplaced-scaffold na na PVQE01000021.1 <> na Primary Assembly 563 na scf_22 unplaced-scaffold na na PVQE01000022.1 <> na Primary Assembly 563 na scf_23 unplaced-scaffold na na PVQE01000023.1 <> na Primary Assembly 563 na scf_24 unplaced-scaffold na na PVQE01000024.1 <> na Primary Assembly 525 na scf_25 unplaced-scaffold na na PVQE01000025.1 <> na Primary Assembly 281 na scf_26 unplaced-scaffold na na PVQE01000026.1 <> na Primary Assembly 381 na scf_27 unplaced-scaffold na na PVQE01000027.1 <> na Primary Assembly 570 na scf_29 unplaced-scaffold na na PVQE01000028.1 <> na Primary Assembly 388 na scf_3 unplaced-scaffold na na PVQE01000003.1 <> na Primary Assembly 1190318 na scf_30 unplaced-scaffold na na PVQE01000029.1 <> na Primary Assembly 571 na scf_31 unplaced-scaffold na na PVQE01000030.1 <> na Primary Assembly 296 na scf_32 unplaced-scaffold na na PVQE01000031.1 <> na Primary Assembly 385 na scf_33 unplaced-scaffold na na PVQE01000032.1 <> na Primary Assembly 263 na scf_34 unplaced-scaffold na na PVQE01000033.1 <> na Primary Assembly 499 na scf_35 unplaced-scaffold na na PVQE01000034.1 <> na Primary Assembly 340 na scf_36 unplaced-scaffold na na PVQE01000035.1 <> na Primary Assembly 466 na scf_37 unplaced-scaffold na na PVQE01000036.1 <> na Primary Assembly 581 na scf_38 unplaced-scaffold na na PVQE01000037.1 <> na Primary Assembly 345 na scf_39 unplaced-scaffold na na PVQE01000038.1 <> na Primary Assembly 305 na scf_4 unplaced-scaffold na na PVQE01000004.1 <> na Primary Assembly 1008896 na scf_40 unplaced-scaffold na na PVQE01000039.1 <> na Primary Assembly 512 na scf_41 unplaced-scaffold na na PVQE01000040.1 <> na Primary Assembly 549 na scf_42 unplaced-scaffold na na PVQE01000041.1 <> na Primary Assembly 274 na scf_43 unplaced-scaffold na na PVQE01000042.1 <> na Primary Assembly 567 na scf_44 unplaced-scaffold na na PVQE01000043.1 <> na Primary Assembly 1078 na scf_45 unplaced-scaffold na na PVQE01000044.1 <> na Primary Assembly 250 na scf_46 unplaced-scaffold na na PVQE01000045.1 <> na Primary Assembly 260 na scf_47 unplaced-scaffold na na PVQE01000046.1 <> na Primary Assembly 276 na scf_48 unplaced-scaffold na na PVQE01000047.1 <> na Primary Assembly 445 na scf_49 unplaced-scaffold na na PVQE01000048.1 <> na Primary Assembly 541 na scf_5 unplaced-scaffold na na PVQE01000005.1 <> na Primary Assembly 908925 na scf_50 unplaced-scaffold na na PVQE01000049.1 <> na Primary Assembly 324 na scf_51 unplaced-scaffold na na PVQE01000050.1 <> na Primary Assembly 639 na scf_52 unplaced-scaffold na na PVQE01000051.1 <> na Primary Assembly 648 na scf_53 unplaced-scaffold na na PVQE01000052.1 <> na Primary Assembly 397 na scf_54 unplaced-scaffold na na PVQE01000053.1 <> na Primary Assembly 335 na scf_55 unplaced-scaffold na na PVQE01000054.1 <> na Primary Assembly 653 na scf_56 unplaced-scaffold na na PVQE01000055.1 <> na Primary Assembly 342 na scf_58 unplaced-scaffold na na PVQE01000056.1 <> na Primary Assembly 688 na scf_59 unplaced-scaffold na na PVQE01000057.1 <> na Primary Assembly 481 na scf_6 unplaced-scaffold na na PVQE01000006.1 <> na Primary Assembly 891033 na scf_60 unplaced-scaffold na na PVQE01000058.1 <> na Primary Assembly 710 na scf_61 unplaced-scaffold na na PVQE01000059.1 <> na Primary Assembly 733 na scf_63 unplaced-scaffold na na PVQE01000060.1 <> na Primary Assembly 537 na scf_65 unplaced-scaffold na na PVQE01000061.1 <> na Primary Assembly 991 na scf_66 unplaced-scaffold na na PVQE01000062.1 <> na Primary Assembly 399 na scf_67 unplaced-scaffold na na PVQE01000063.1 <> na Primary Assembly 797 na scf_68 unplaced-scaffold na na PVQE01000064.1 <> na Primary Assembly 722 na scf_69 unplaced-scaffold na na PVQE01000065.1 <> na Primary Assembly 743 na scf_7 unplaced-scaffold na na PVQE01000007.1 <> na Primary Assembly 883903 na scf_70 unplaced-scaffold na na PVQE01000066.1 <> na Primary Assembly 840 na scf_71 unplaced-scaffold na na PVQE01000067.1 <> na Primary Assembly 846 na scf_72 unplaced-scaffold na na PVQE01000068.1 <> na Primary Assembly 626 na scf_73 unplaced-scaffold na na PVQE01000069.1 <> na Primary Assembly 735 na scf_75 unplaced-scaffold na na PVQE01000070.1 <> na Primary Assembly 898 na scf_76 unplaced-scaffold na na PVQE01000071.1 <> na Primary Assembly 1003 na scf_78 unplaced-scaffold na na PVQE01000072.1 <> na Primary Assembly 949 na scf_79 unplaced-scaffold na na PVQE01000073.1 <> na Primary Assembly 919 na scf_8 unplaced-scaffold na na PVQE01000008.1 <> na Primary Assembly 596968 na scf_80 unplaced-scaffold na na PVQE01000074.1 <> na Primary Assembly 829 na scf_81 unplaced-scaffold na na PVQE01000075.1 <> na Primary Assembly 1150 na scf_82 unplaced-scaffold na na PVQE01000076.1 <> na Primary Assembly 1189 na scf_83 unplaced-scaffold na na PVQE01000077.1 <> na Primary Assembly 1196 na scf_84 unplaced-scaffold na na PVQE01000078.1 <> na Primary Assembly 1226 na scf_85 unplaced-scaffold na na PVQE01000079.1 <> na Primary Assembly 1342 na scf_86 unplaced-scaffold na na PVQE01000080.1 <> na Primary Assembly 1543 na scf_87 unplaced-scaffold na na PVQE01000081.1 <> na Primary Assembly 1592 na scf_88 unplaced-scaffold na na PVQE01000082.1 <> na Primary Assembly 1923 na scf_89 unplaced-scaffold na na PVQE01000083.1 <> na Primary Assembly 2355 na scf_9 unplaced-scaffold na na PVQE01000009.1 <> na Primary Assembly 417642 na scf_90 unplaced-scaffold na na PVQE01000084.1 <> na Primary Assembly 2482 na scf_91 unplaced-scaffold na na PVQE01000085.1 <> na Primary Assembly 2641 na scf_92 unplaced-scaffold na na PVQE01000086.1 <> na Primary Assembly 3179 na scf_93 unplaced-scaffold na na PVQE01000087.1 <> na Primary Assembly 3225 na scf_94 unplaced-scaffold na na PVQE01000088.1 <> na Primary Assembly 3862 na scf_95 unplaced-scaffold na na PVQE01000089.1 <> na Primary Assembly 4148 na scf_96 unplaced-scaffold na na PVQE01000090.1 <> na Primary Assembly 5685 na scf_97 unplaced-scaffold na na PVQE01000091.1 <> na Primary Assembly 6029 na scf_98 unplaced-scaffold na na PVQE01000092.1 <> na Primary Assembly 500 na scf_99 unplaced-scaffold na na PVQE01000093.1 <> na Primary Assembly 332 na