# Assembly name: ASM596654v1 # Organism name: Pythium oligandrum (oomycetes) # Infraspecific name: strain=ATCC 38472_TT # Taxid: 41045 # BioSample: SAMN11246703 # BioProject: PRJNA528861 # Submitter: Laboratoire de Recherche en Sciences Vegetales # Date: 2019-06-04 # Assembly type: haploid # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: SPLM01 # Assembly method: SMRTanalysis v. 2.3.0 # Expected final version: no # Genome coverage: 112.0x # Sequencing technology: PacBio RSII # GenBank assembly accession: GCA_005966545.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_005966615.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name unitig_2 unplaced-scaffold na na SPLM01000001.1 <> na Primary Assembly 2388974 na unitig_19 unplaced-scaffold na na SPLM01000002.1 <> na Primary Assembly 1581562 na unitig_6 unplaced-scaffold na na SPLM01000003.1 <> na Primary Assembly 1295785 na unitig_386 unplaced-scaffold na na SPLM01000004.1 <> na Primary Assembly 930852 na unitig_66 unplaced-scaffold na na SPLM01000005.1 <> na Primary Assembly 691550 na unitig_65 unplaced-scaffold na na SPLM01000006.1 <> na Primary Assembly 718796 na unitig_387 unplaced-scaffold na na SPLM01000007.1 <> na Primary Assembly 445101 na unitig_391 unplaced-scaffold na na SPLM01000008.1 <> na Primary Assembly 312931 na unitig_476 unplaced-scaffold na na SPLM01000009.1 <> na Primary Assembly 28397 na unitig_466 unplaced-scaffold na na SPLM01000010.1 <> na Primary Assembly 31229 na unitig_380 unplaced-scaffold na na SPLM01000011.1 <> na Primary Assembly 29629 na unitig_383 unplaced-scaffold na na SPLM01000012.1 <> na Primary Assembly 31333 na unitig_480 unplaced-scaffold na na SPLM01000013.1 <> na Primary Assembly 8101 na unitig_410 unplaced-scaffold na na SPLM01000014.1 <> na Primary Assembly 19672 na unitig_76 unplaced-scaffold na na SPLM01000015.1 <> na Primary Assembly 21979 na unitig_420 unplaced-scaffold na na SPLM01000016.1 <> na Primary Assembly 28794 na unitig_90 unplaced-scaffold na na SPLM01000017.1 <> na Primary Assembly 29193 na unitig_93 unplaced-scaffold na na SPLM01000018.1 <> na Primary Assembly 56279 na unitig_37 unplaced-scaffold na na SPLM01000019.1 <> na Primary Assembly 50953 na unitig_493 unplaced-scaffold na na SPLM01000020.1 <> na Primary Assembly 15126 na unitig_190 unplaced-scaffold na na SPLM01000021.1 <> na Primary Assembly 5983 na unitig_399 unplaced-scaffold na na SPLM01000022.1 <> na Primary Assembly 39138 na unitig_13 unplaced-scaffold na na SPLM01000023.1 <> na Primary Assembly 20604 na unitig_23 unplaced-scaffold na na SPLM01000024.1 <> na Primary Assembly 21076 na unitig_135 unplaced-scaffold na na SPLM01000025.1 <> na Primary Assembly 29962 na unitig_110 unplaced-scaffold na na SPLM01000026.1 <> na Primary Assembly 50183 na unitig_44 unplaced-scaffold na na SPLM01000027.1 <> na Primary Assembly 13791 na unitig_108 unplaced-scaffold na na SPLM01000028.1 <> na Primary Assembly 24145 na unitig_77 unplaced-scaffold na na SPLM01000029.1 <> na Primary Assembly 7338 na unitig_458 unplaced-scaffold na na SPLM01000030.1 <> na Primary Assembly 18729 na unitig_129 unplaced-scaffold na na SPLM01000031.1 <> na Primary Assembly 37735 na unitig_421 unplaced-scaffold na na SPLM01000032.1 <> na Primary Assembly 28749 na unitig_27 unplaced-scaffold na na SPLM01000033.1 <> na Primary Assembly 15695 na unitig_164 unplaced-scaffold na na SPLM01000034.1 <> na Primary Assembly 2251 na unitig_397 unplaced-scaffold na na SPLM01000035.1 <> na Primary Assembly 41952 na unitig_9 unplaced-scaffold na na SPLM01000036.1 <> na Primary Assembly 1938411 na unitig_34 unplaced-scaffold na na SPLM01000037.1 <> na Primary Assembly 1292773 na unitig_43 unplaced-scaffold na na SPLM01000038.1 <> na Primary Assembly 1241024 na unitig_450 unplaced-scaffold na na SPLM01000039.1 <> na Primary Assembly 900940 na unitig_59 unplaced-scaffold na na SPLM01000040.1 <> na Primary Assembly 672178 na unitig_81 unplaced-scaffold na na SPLM01000041.1 <> na Primary Assembly 414214 na unitig_91 unplaced-scaffold na na SPLM01000042.1 <> na Primary Assembly 263584 na unitig_477 unplaced-scaffold na na SPLM01000043.1 <> na Primary Assembly 35276 na unitig_96 unplaced-scaffold na na SPLM01000044.1 <> na Primary Assembly 107273 na unitig_467 unplaced-scaffold na na SPLM01000045.1 <> na Primary Assembly 28321 na unitig_459 unplaced-scaffold na na SPLM01000046.1 <> na Primary Assembly 37322 na unitig_444 unplaced-scaffold na na SPLM01000047.1 <> na Primary Assembly 27503 na unitig_12 unplaced-scaffold na na SPLM01000048.1 <> na Primary Assembly 28598 na unitig_499 unplaced-scaffold na na SPLM01000049.1 <> na Primary Assembly 14131 na unitig_141 unplaced-scaffold na na SPLM01000050.1 <> na Primary Assembly 23263 na unitig_20 unplaced-scaffold na na SPLM01000051.1 <> na Primary Assembly 25191 na unitig_101 unplaced-scaffold na na SPLM01000052.1 <> na Primary Assembly 41911 na unitig_40 unplaced-scaffold na na SPLM01000053.1 <> na Primary Assembly 19155 na unitig_92 unplaced-scaffold na na SPLM01000054.1 <> na Primary Assembly 42214 na unitig_143 unplaced-scaffold na na SPLM01000055.1 <> na Primary Assembly 23675 na unitig_70 unplaced-scaffold na na SPLM01000056.1 <> na Primary Assembly 15331 na unitig_144 unplaced-scaffold na na SPLM01000057.1 <> na Primary Assembly 28552 na unitig_463 unplaced-scaffold na na SPLM01000058.1 <> na Primary Assembly 11752 na unitig_170 unplaced-scaffold na na SPLM01000059.1 <> na Primary Assembly 4084 na unitig_33 unplaced-scaffold na na SPLM01000060.1 <> na Primary Assembly 5306 na unitig_32 unplaced-scaffold na na SPLM01000061.1 <> na Primary Assembly 11988 na unitig_102 unplaced-scaffold na na SPLM01000062.1 <> na Primary Assembly 37825 na unitig_87 unplaced-scaffold na na SPLM01000063.1 <> na Primary Assembly 31015 na unitig_485 unplaced-scaffold na na SPLM01000064.1 <> na Primary Assembly 23269 na unitig_115 unplaced-scaffold na na SPLM01000065.1 <> na Primary Assembly 22035 na unitig_452 unplaced-scaffold na na SPLM01000066.1 <> na Primary Assembly 27012 na unitig_405 unplaced-scaffold na na SPLM01000067.1 <> na Primary Assembly 9538 na unitig_441 unplaced-scaffold na na SPLM01000068.1 <> na Primary Assembly 24097 na unitig_167 unplaced-scaffold na na SPLM01000069.1 <> na Primary Assembly 3999 na unitig_30 unplaced-scaffold na na SPLM01000070.1 <> na Primary Assembly 10827 na unitig_137 unplaced-scaffold na na SPLM01000071.1 <> na Primary Assembly 18429 na unitig_3 unplaced-scaffold na na SPLM01000072.1 <> na Primary Assembly 2021824 na unitig_507 unplaced-scaffold na na SPLM01000073.1 <> na Primary Assembly 1758014 na unitig_35 unplaced-scaffold na na SPLM01000074.1 <> na Primary Assembly 1203823 na unitig_56 unplaced-scaffold na na SPLM01000075.1 <> na Primary Assembly 944210 na unitig_67 unplaced-scaffold na na SPLM01000076.1 <> na Primary Assembly 686512 na unitig_72 unplaced-scaffold na na SPLM01000077.1 <> na Primary Assembly 560858 na unitig_85 unplaced-scaffold na na SPLM01000078.1 <> na Primary Assembly 322661 na unitig_465 unplaced-scaffold na na SPLM01000079.1 <> na Primary Assembly 51417 na unitig_473 unplaced-scaffold na na SPLM01000080.1 <> na Primary Assembly 30951 na unitig_496 unplaced-scaffold na na SPLM01000081.1 <> na Primary Assembly 29750 na unitig_482 unplaced-scaffold na na SPLM01000082.1 <> na Primary Assembly 14789 na unitig_42 unplaced-scaffold na na SPLM01000083.1 <> na Primary Assembly 34161 na unitig_479 unplaced-scaffold na na SPLM01000084.1 <> na Primary Assembly 29405 na unitig_138 unplaced-scaffold na na SPLM01000085.1 <> na Primary Assembly 72104 na unitig_11 unplaced-scaffold na na SPLM01000086.1 <> na Primary Assembly 25329 na unitig_74 unplaced-scaffold na na SPLM01000087.1 <> na Primary Assembly 29498 na unitig_460 unplaced-scaffold na na SPLM01000088.1 <> na Primary Assembly 20190 na unitig_106 unplaced-scaffold na na SPLM01000089.1 <> na Primary Assembly 33017 na unitig_489 unplaced-scaffold na na SPLM01000090.1 <> na Primary Assembly 29894 na unitig_29 unplaced-scaffold na na SPLM01000091.1 <> na Primary Assembly 27848 na unitig_89 unplaced-scaffold na na SPLM01000092.1 <> na Primary Assembly 38868 na unitig_486 unplaced-scaffold na na SPLM01000093.1 <> na Primary Assembly 37613 na unitig_130 unplaced-scaffold na na SPLM01000094.1 <> na Primary Assembly 13266 na unitig_483 unplaced-scaffold na na SPLM01000095.1 <> na Primary Assembly 28868 na unitig_384 unplaced-scaffold na na SPLM01000096.1 <> na Primary Assembly 29285 na unitig_22 unplaced-scaffold na na SPLM01000097.1 <> na Primary Assembly 18506 na unitig_54 unplaced-scaffold na na SPLM01000098.1 <> na Primary Assembly 13524 na unitig_159 unplaced-scaffold na na SPLM01000099.1 <> na Primary Assembly 7449 na unitig_413 unplaced-scaffold na na SPLM01000100.1 <> na Primary Assembly 34901 na unitig_105 unplaced-scaffold na na SPLM01000101.1 <> na Primary Assembly 13652 na unitig_409 unplaced-scaffold na na SPLM01000102.1 <> na Primary Assembly 12608 na unitig_453 unplaced-scaffold na na SPLM01000103.1 <> na Primary Assembly 7598 na unitig_75 unplaced-scaffold na na SPLM01000104.1 <> na Primary Assembly 13986 na unitig_14 unplaced-scaffold na na SPLM01000105.1 <> na Primary Assembly 38798 na unitig_389 unplaced-scaffold na na SPLM01000106.1 <> na Primary Assembly 35416 na unitig_417 unplaced-scaffold na na SPLM01000107.1 <> na Primary Assembly 30636 na unitig_0 unplaced-scaffold na na SPLM01000108.1 <> na Primary Assembly 2697281 na unitig_7 unplaced-scaffold na na SPLM01000109.1 <> na Primary Assembly 1775558 na unitig_26 unplaced-scaffold na na SPLM01000110.1 <> na Primary Assembly 1362172 na unitig_412 unplaced-scaffold na na SPLM01000111.1 <> na Primary Assembly 1146252 na unitig_57 unplaced-scaffold na na SPLM01000112.1 <> na Primary Assembly 761458 na unitig_73 unplaced-scaffold na na SPLM01000113.1 <> na Primary Assembly 612454 na unitig_80 unplaced-scaffold na na SPLM01000114.1 <> na Primary Assembly 413719 na unitig_469 unplaced-scaffold na na SPLM01000115.1 <> na Primary Assembly 35848 na unitig_474 unplaced-scaffold na na SPLM01000116.1 <> na Primary Assembly 33083 na unitig_478 unplaced-scaffold na na SPLM01000117.1 <> na Primary Assembly 31818 na unitig_470 unplaced-scaffold na na SPLM01000118.1 <> na Primary Assembly 31639 na unitig_461 unplaced-scaffold na na SPLM01000119.1 <> na Primary Assembly 44694 na unitig_494 unplaced-scaffold na na SPLM01000120.1 <> na Primary Assembly 16712 na unitig_462 unplaced-scaffold na na SPLM01000121.1 <> na Primary Assembly 38301 na unitig_10 unplaced-scaffold na na SPLM01000122.1 <> na Primary Assembly 20778 na unitig_31 unplaced-scaffold na na SPLM01000123.1 <> na Primary Assembly 18144 na unitig_150 unplaced-scaffold na na SPLM01000124.1 <> na Primary Assembly 13305 na unitig_132 unplaced-scaffold na na SPLM01000125.1 <> na Primary Assembly 20295 na unitig_88 unplaced-scaffold na na SPLM01000126.1 <> na Primary Assembly 52867 na unitig_55 unplaced-scaffold na na SPLM01000127.1 <> na Primary Assembly 15541 na unitig_63 unplaced-scaffold na na SPLM01000128.1 <> na Primary Assembly 16820 na unitig_217 unplaced-scaffold na na SPLM01000129.1 <> na Primary Assembly 24499 na unitig_134 unplaced-scaffold na na SPLM01000130.1 <> na Primary Assembly 22705 na unitig_15 unplaced-scaffold na na SPLM01000131.1 <> na Primary Assembly 20885 na unitig_271 unplaced-scaffold na na SPLM01000132.1 <> na Primary Assembly 6910 na unitig_414 unplaced-scaffold na na SPLM01000133.1 <> na Primary Assembly 27490 na unitig_17 unplaced-scaffold na na SPLM01000134.1 <> na Primary Assembly 16451 na unitig_47 unplaced-scaffold na na SPLM01000135.1 <> na Primary Assembly 17057 na unitig_46 unplaced-scaffold na na SPLM01000136.1 <> na Primary Assembly 14851 na unitig_109 unplaced-scaffold na na SPLM01000137.1 <> na Primary Assembly 15811 na unitig_505 unplaced-scaffold na na SPLM01000138.1 <> na Primary Assembly 8502 na unitig_398 unplaced-scaffold na na SPLM01000139.1 <> na Primary Assembly 21305 na unitig_295 unplaced-scaffold na na SPLM01000140.1 <> na Primary Assembly 3644 na unitig_127 unplaced-scaffold na na SPLM01000141.1 <> na Primary Assembly 6978 na unitig_439 unplaced-scaffold na na SPLM01000142.1 <> na Primary Assembly 29565 na unitig_97 unplaced-scaffold na na SPLM01000143.1 <> na Primary Assembly 41659 na unitig_4 unplaced-scaffold na na SPLM01000144.1 <> na Primary Assembly 1984411 na unitig_28 unplaced-scaffold na na SPLM01000145.1 <> na Primary Assembly 1480085 na unitig_39 unplaced-scaffold na na SPLM01000146.1 <> na Primary Assembly 1280398 na unitig_53 unplaced-scaffold na na SPLM01000147.1 <> na Primary Assembly 955744 na unitig_68 unplaced-scaffold na na SPLM01000148.1 <> na Primary Assembly 648613 na unitig_18 unplaced-scaffold na na SPLM01000149.1 <> na Primary Assembly 466326 na unitig_395 unplaced-scaffold na na SPLM01000150.1 <> na Primary Assembly 57066 na unitig_103 unplaced-scaffold na na SPLM01000151.1 <> na Primary Assembly 186865 na unitig_468 unplaced-scaffold na na SPLM01000152.1 <> na Primary Assembly 33465 na unitig_472 unplaced-scaffold na na SPLM01000153.1 <> na Primary Assembly 25790 na unitig_481 unplaced-scaffold na na SPLM01000154.1 <> na Primary Assembly 29611 na unitig_411 unplaced-scaffold na na SPLM01000155.1 <> na Primary Assembly 29804 na unitig_136 unplaced-scaffold na na SPLM01000156.1 <> na Primary Assembly 13781 na unitig_393 unplaced-scaffold na na SPLM01000157.1 <> na Primary Assembly 35189 na unitig_61 unplaced-scaffold na na SPLM01000158.1 <> na Primary Assembly 22718 na unitig_41 unplaced-scaffold na na SPLM01000159.1 <> na Primary Assembly 24576 na unitig_24 unplaced-scaffold na na SPLM01000160.1 <> na Primary Assembly 22702 na unitig_431 unplaced-scaffold na na SPLM01000161.1 <> na Primary Assembly 26016 na unitig_84 unplaced-scaffold na na SPLM01000162.1 <> na Primary Assembly 5221 na unitig_104 unplaced-scaffold na na SPLM01000163.1 <> na Primary Assembly 37202 na unitig_400 unplaced-scaffold na na SPLM01000164.1 <> na Primary Assembly 34591 na unitig_464 unplaced-scaffold na na SPLM01000165.1 <> na Primary Assembly 34980 na unitig_48 unplaced-scaffold na na SPLM01000166.1 <> na Primary Assembly 21688 na unitig_36 unplaced-scaffold na na SPLM01000167.1 <> na Primary Assembly 19605 na unitig_121 unplaced-scaffold na na SPLM01000168.1 <> na Primary Assembly 30873 na unitig_5 unplaced-scaffold na na SPLM01000169.1 <> na Primary Assembly 14155 na unitig_21 unplaced-scaffold na na SPLM01000170.1 <> na Primary Assembly 27739 na unitig_154 unplaced-scaffold na na SPLM01000171.1 <> na Primary Assembly 6165 na unitig_402 unplaced-scaffold na na SPLM01000172.1 <> na Primary Assembly 23502 na unitig_62 unplaced-scaffold na na SPLM01000173.1 <> na Primary Assembly 20831 na unitig_45 unplaced-scaffold na na SPLM01000174.1 <> na Primary Assembly 16399 na unitig_38 unplaced-scaffold na na SPLM01000175.1 <> na Primary Assembly 12834 na unitig_406 unplaced-scaffold na na SPLM01000176.1 <> na Primary Assembly 19499 na unitig_139 unplaced-scaffold na na SPLM01000177.1 <> na Primary Assembly 13878 na unitig_175 unplaced-scaffold na na SPLM01000178.1 <> na Primary Assembly 6916 na unitig_100 unplaced-scaffold na na SPLM01000179.1 <> na Primary Assembly 25774 na