# Assembly name: ASM1103364v1 # Organism name: Fusarium oxysporum (ascomycete fungi) # Infraspecific name: strain=EtdFoc-174 # Taxid: 5507 # BioSample: SAMN07711018 # BioProject: PRJNA412392 # Submitter: Cook Lab - University of California at Davis # Date: 2020-02-27 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: WEST01 # Assembly method: SPAdes v. 3.10.1 # Expected final version: yes # Genome coverage: 12.23259313x # Sequencing technology: Illumina # GenBank assembly accession: GCA_011033645.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_011033655.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Contig152 unplaced-scaffold na na WEST01000001.1 <> na Primary Assembly 26973 na Contig312 unplaced-scaffold na na WEST01000002.1 <> na Primary Assembly 23358 na Contig409 unplaced-scaffold na na WEST01000003.1 <> na Primary Assembly 21131 na Contig70 unplaced-scaffold na na WEST01000004.1 <> na Primary Assembly 19963 na Contig1552 unplaced-scaffold na na WEST01000005.1 <> na Primary Assembly 19433 na Contig110 unplaced-scaffold na na WEST01000006.1 <> na Primary Assembly 18787 na Contig1184 unplaced-scaffold na na WEST01000007.1 <> na Primary Assembly 17702 na Contig502 unplaced-scaffold na na WEST01000008.1 <> na Primary Assembly 16730 na Contig32 unplaced-scaffold na na WEST01000009.1 <> na Primary Assembly 15750 na Contig335 unplaced-scaffold na na WEST01000010.1 <> na Primary Assembly 15740 na scaffold70.1:size15674 unplaced-scaffold na na WEST01000011.1 <> na Primary Assembly 15674 na scaffold169.1:size15598 unplaced-scaffold na na WEST01000012.1 <> na Primary Assembly 15598 na scaffold54.1:size15571 unplaced-scaffold na na WEST01000013.1 <> na Primary Assembly 15571 na scaffold332.1:size15485 unplaced-scaffold na na WEST01000014.1 <> na Primary Assembly 15485 na Contig858 unplaced-scaffold na na WEST01000015.1 <> na Primary Assembly 15375 na Contig58 unplaced-scaffold na na WEST01000016.1 <> na Primary Assembly 15350 na scaffold3045.1:size15348 unplaced-scaffold na na WEST01000017.1 <> na Primary Assembly 15348 na Contig362 unplaced-scaffold na na WEST01000018.1 <> na Primary Assembly 15290 na scaffold42.1:size15193 unplaced-scaffold na na WEST01000019.1 <> na Primary Assembly 15193 na Contig36 unplaced-scaffold na na WEST01000020.1 <> na Primary Assembly 15073 na Contig548 unplaced-scaffold na na WEST01000021.1 <> na Primary Assembly 14982 na scaffold314.1:size14923 unplaced-scaffold na na WEST01000022.1 <> na Primary Assembly 14923 na Contig5 unplaced-scaffold na na WEST01000023.1 <> na Primary Assembly 14744 na scaffold592.1:size14685 unplaced-scaffold na na WEST01000024.1 <> na Primary Assembly 14685 na Contig2069 unplaced-scaffold na na WEST01000025.1 <> na Primary Assembly 14615 na scaffold962.1:size14599 unplaced-scaffold na na WEST01000026.1 <> na Primary Assembly 14599 na scaffold17.1:size14548 unplaced-scaffold na na WEST01000027.1 <> na Primary Assembly 14548 na Contig138 unplaced-scaffold na na WEST01000028.1 <> na Primary Assembly 14267 na Contig171 unplaced-scaffold na na WEST01000029.1 <> na Primary Assembly 14258 na scaffold778.1:size14228 unplaced-scaffold na na WEST01000030.1 <> na Primary Assembly 14228 na Contig17 unplaced-scaffold na na WEST01000031.1 <> na Primary Assembly 13963 na Contig150 unplaced-scaffold na na WEST01000032.1 <> na Primary Assembly 13747 na scaffold25.1:size13739 unplaced-scaffold na na WEST01000033.1 <> na Primary Assembly 13739 na scaffold1084.1:size13536 unplaced-scaffold na na WEST01000034.1 <> na Primary Assembly 13536 na scaffold49.1:size13534 unplaced-scaffold na na WEST01000035.1 <> na Primary Assembly 13534 na Contig155 unplaced-scaffold na na WEST01000036.1 <> na Primary Assembly 13527 na scaffold448.1:size13417 unplaced-scaffold na na WEST01000037.1 <> na Primary Assembly 13417 na scaffold85.1:size13305 unplaced-scaffold na na WEST01000038.1 <> na Primary Assembly 13305 na Contig702 unplaced-scaffold na na WEST01000039.1 <> na Primary Assembly 13262 na Contig453 unplaced-scaffold na na WEST01000040.1 <> na Primary Assembly 13173 na Contig1095 unplaced-scaffold na na WEST01000041.1 <> na Primary Assembly 13112 na Contig2 unplaced-scaffold na na WEST01000042.1 <> na Primary Assembly 13111 na scaffold13.1:size12966 unplaced-scaffold na na WEST01000043.1 <> na Primary Assembly 12966 na Contig68 unplaced-scaffold na na WEST01000044.1 <> na Primary Assembly 12713 na scaffold1065.1:size12664 unplaced-scaffold na na WEST01000045.1 <> na Primary Assembly 12664 na scaffold382.1:size12656 unplaced-scaffold na na WEST01000046.1 <> na Primary Assembly 12656 na Contig367 unplaced-scaffold na na WEST01000047.1 <> na Primary Assembly 12581 na Contig1452 unplaced-scaffold na na WEST01000048.1 <> na Primary Assembly 12569 na scaffold22.1:size12558 unplaced-scaffold na na WEST01000049.1 <> na Primary Assembly 12558 na Contig1125 unplaced-scaffold na na WEST01000050.1 <> na Primary Assembly 12487 na scaffold231.1:size12393 unplaced-scaffold na na WEST01000051.1 <> na Primary Assembly 12393 na scaffold2828.1:size12388 unplaced-scaffold na na WEST01000052.1 <> na Primary Assembly 12388 na Contig1636 unplaced-scaffold na na WEST01000053.1 <> na Primary Assembly 12296 na Contig591 unplaced-scaffold na na WEST01000054.1 <> na Primary Assembly 12210 na Contig354 unplaced-scaffold na na WEST01000055.1 <> na Primary Assembly 12168 na scaffold855.1:size12166 unplaced-scaffold na na WEST01000056.1 <> na Primary Assembly 12166 na Contig107 unplaced-scaffold na na WEST01000057.1 <> na Primary Assembly 12163 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WEST01000069.1 <> na Primary Assembly 11862 na Contig141 unplaced-scaffold na na WEST01000070.1 <> na Primary Assembly 11848 na Contig474 unplaced-scaffold na na WEST01000071.1 <> na Primary Assembly 11820 na Contig134 unplaced-scaffold na na WEST01000072.1 <> na Primary Assembly 11783 na Contig962 unplaced-scaffold na na WEST01000073.1 <> na Primary Assembly 11768 na Contig902 unplaced-scaffold na na WEST01000074.1 <> na Primary Assembly 11752 na scaffold299.1:size11740 unplaced-scaffold na na WEST01000075.1 <> na Primary Assembly 11740 na scaffold259.1:size11735 unplaced-scaffold na na WEST01000076.1 <> na Primary Assembly 11735 na Contig546 unplaced-scaffold na na WEST01000077.1 <> na Primary Assembly 11719 na scaffold542.1:size11713 unplaced-scaffold na na WEST01000078.1 <> na Primary Assembly 11713 na scaffold546.1:size11702 unplaced-scaffold na na WEST01000079.1 <> na Primary Assembly 11702 na Contig1408 unplaced-scaffold na na WEST01000080.1 <> na Primary Assembly 11668 na Contig818 unplaced-scaffold na na WEST01000081.1 <> na Primary Assembly 11610 na Contig619 unplaced-scaffold na na WEST01000082.1 <> na Primary Assembly 11603 na Contig1 unplaced-scaffold na na WEST01000083.1 <> na Primary Assembly 11579 na scaffold548.1:size11571 unplaced-scaffold na na WEST01000084.1 <> na Primary Assembly 11571 na scaffold76.1:size11524 unplaced-scaffold na na WEST01000085.1 <> na Primary Assembly 11524 na Contig2137 unplaced-scaffold na na WEST01000086.1 <> na Primary Assembly 11521 na Contig7 unplaced-scaffold na na WEST01000087.1 <> na Primary Assembly 11518 na scaffold2362.1:size11506 unplaced-scaffold na na WEST01000088.1 <> na Primary Assembly 11506 na Contig351 unplaced-scaffold na na WEST01000089.1 <> na Primary Assembly 11466 na scaffold765.1:size11412 unplaced-scaffold na na WEST01000090.1 <> na Primary Assembly 11412 na Contig707 unplaced-scaffold na na WEST01000091.1 <> na Primary Assembly 11406 na Contig49 unplaced-scaffold na na WEST01000092.1 <> na Primary Assembly 11404 na scaffold6.1:size11403 unplaced-scaffold na na WEST01000093.1 <> na Primary Assembly 11403 na scaffold965.1:size11312 unplaced-scaffold na na WEST01000094.1 <> na Primary Assembly 11312 na scaffold627.1:size11310 unplaced-scaffold na na WEST01000095.1 <> na Primary Assembly 11310 na Contig1352 unplaced-scaffold na na WEST01000096.1 <> na Primary Assembly 11273 na scaffold5071.1:size11245 unplaced-scaffold na na WEST01000097.1 <> na Primary Assembly 11245 na Contig322 unplaced-scaffold na na WEST01000098.1 <> na Primary Assembly 11230 na scaffold2991.1:size11213 unplaced-scaffold na na WEST01000099.1 <> na Primary Assembly 11213 na scaffold1177.1:size11197 unplaced-scaffold na na WEST01000100.1 <> na Primary Assembly 11197 na scaffold710.1:size11150 unplaced-scaffold na na WEST01000101.1 <> na Primary Assembly 11150 na Contig91 unplaced-scaffold na na WEST01000102.1 <> na Primary Assembly 11147 na Contig14 unplaced-scaffold na na WEST01000103.1 <> na Primary Assembly 11139 na scaffold1080.1:size11116 unplaced-scaffold na na WEST01000104.1 <> na Primary Assembly 11116 na Contig119 unplaced-scaffold na na WEST01000105.1 <> na Primary Assembly 11058 na Contig77 unplaced-scaffold na na WEST01000106.1 <> na Primary Assembly 11057 na scaffold500.1:size11008 unplaced-scaffold na na WEST01000107.1 <> na Primary Assembly 11008 na scaffold193.1:size10923 unplaced-scaffold na na WEST01000108.1 <> na Primary Assembly 10923 na scaffold43.1:size10841 unplaced-scaffold na na WEST01000109.1 <> na Primary Assembly 10841 na Contig224 unplaced-scaffold na na WEST01000110.1 <> na Primary Assembly 10820 na scaffold953.1:size10799 unplaced-scaffold na na WEST01000111.1 <> na Primary Assembly 10799 na scaffold2423.1:size10783 unplaced-scaffold na na WEST01000112.1 <> na Primary Assembly 10783 na scaffold568.1:size10740 unplaced-scaffold na na WEST01000113.1 <> na Primary Assembly 10740 na scaffold711.1:size10687 unplaced-scaffold na na WEST01000114.1 <> na Primary Assembly 10687 na scaffold163.1:size10665 unplaced-scaffold na na WEST01000115.1 <> na Primary Assembly 10665 na Contig116 unplaced-scaffold na na WEST01000116.1 <> na Primary Assembly 10634 na scaffold2334.1:size10597 unplaced-scaffold na na WEST01000117.1 <> na Primary Assembly 10597 na Contig2065 unplaced-scaffold na na WEST01000118.1 <> na Primary Assembly 10579 na Contig206 unplaced-scaffold na na WEST01000119.1 <> na Primary Assembly 10579 na Contig288 unplaced-scaffold na na WEST01000120.1 <> na Primary Assembly 10568 na Contig436 unplaced-scaffold na na WEST01000121.1 <> na Primary Assembly 10547 na scaffold458.1:size10527 unplaced-scaffold na na WEST01000122.1 <> na Primary Assembly 10527 na Contig205 unplaced-scaffold na na WEST01000123.1 <> na Primary Assembly 10527 na Contig878 unplaced-scaffold na na WEST01000124.1 <> na Primary Assembly 10468 na scaffold162.1:size10441 unplaced-scaffold na na WEST01000125.1 <> na Primary Assembly 10441 na Contig26 unplaced-scaffold na na WEST01000126.1 <> na Primary Assembly 10402 na scaffold856.1:size10384 unplaced-scaffold na na WEST01000127.1 <> na Primary Assembly 10384 na scaffold665.1:size10383 unplaced-scaffold na na WEST01000128.1 <> na Primary Assembly 10383 na scaffold2989.1:size10375 unplaced-scaffold na na WEST01000129.1 <> na Primary Assembly 10375 na scaffold407.1:size10364 unplaced-scaffold na na WEST01000130.1 <> na Primary Assembly 10364 na Contig10 unplaced-scaffold na na WEST01000131.1 <> na Primary Assembly 10360 na scaffold374.1:size10353 unplaced-scaffold na na WEST01000132.1 <> na Primary Assembly 10353 na Contig982 unplaced-scaffold na na WEST01000133.1 <> na Primary Assembly 10331 na scaffold384.1:size10329 unplaced-scaffold na na WEST01000134.1 <> na Primary Assembly 10329 na scaffold267.1:size10308 unplaced-scaffold na na WEST01000135.1 <> na Primary Assembly 10308 na scaffold865.1:size10306 unplaced-scaffold na na WEST01000136.1 <> na Primary Assembly 10306 na scaffold1813.1:size10284 unplaced-scaffold na na WEST01000137.1 <> na Primary Assembly 10284 na scaffold1125.1:size10216 unplaced-scaffold na na WEST01000138.1 <> na Primary Assembly 10216 na Contig990 unplaced-scaffold na na WEST01000139.1 <> na Primary Assembly 10206 na scaffold134.1:size10199 unplaced-scaffold na na WEST01000140.1 <> na Primary Assembly 10199 na scaffold96.1:size10182 unplaced-scaffold na na WEST01000141.1 <> na Primary Assembly 10182 na Contig1433 unplaced-scaffold na na WEST01000142.1 <> na Primary Assembly 10173 na scaffold930.1:size10172 unplaced-scaffold na na WEST01000143.1 <> na Primary Assembly 10172 na Contig807 unplaced-scaffold na na WEST01000144.1 <> na Primary Assembly 10154 na scaffold3060.1:size10150 unplaced-scaffold na na WEST01000145.1 <> na Primary Assembly 10150 na scaffold428.1:size10123 unplaced-scaffold na na WEST01000146.1 <> na Primary Assembly 10123 na Contig246 unplaced-scaffold na na WEST01000147.1 <> na Primary Assembly 10116 na scaffold452.1:size10115 unplaced-scaffold na na WEST01000148.1 <> na Primary Assembly 10115 na scaffold489.1:size10109 unplaced-scaffold na na WEST01000149.1 <> na Primary Assembly 10109 na Contig42 unplaced-scaffold na na WEST01000150.1 <> na Primary Assembly 10101 na scaffold3.1:size10088 unplaced-scaffold na na WEST01000151.1 <> na Primary Assembly 10088 na Contig247 unplaced-scaffold na na WEST01000152.1 <> na Primary Assembly 10070 na scaffold1465.1:size10065 unplaced-scaffold na na WEST01000153.1 <> na Primary Assembly 10065 na Contig392 unplaced-scaffold na na WEST01000154.1 <> na Primary Assembly 10065 na scaffold3673.1:size10056 unplaced-scaffold na na WEST01000155.1 <> na Primary Assembly 10056 na scaffold1251.1:size10038 unplaced-scaffold na na WEST01000156.1 <> na Primary Assembly 10038 na Contig2158 unplaced-scaffold na na WEST01000157.1 <> na Primary Assembly 10020 na Contig327 unplaced-scaffold na na WEST01000158.1 <> na Primary Assembly 10011 na Contig114 unplaced-scaffold na na WEST01000159.1 <> na Primary Assembly 9995 na Contig423 unplaced-scaffold na na WEST01000160.1 <> na Primary Assembly 9950 na scaffold348.1:size9938 unplaced-scaffold na na WEST01000161.1 <> na Primary Assembly 9938 na Contig194 unplaced-scaffold na na WEST01000162.1 <> na Primary Assembly 9931 na scaffold4369.1:size9924 unplaced-scaffold na na WEST01000163.1 <> na Primary Assembly 9924 na Contig350 unplaced-scaffold na na WEST01000164.1 <> na Primary Assembly 9906 na scaffold83.1:size9898 unplaced-scaffold na na WEST01000165.1 <> na Primary Assembly 9898 na Contig30 unplaced-scaffold na na WEST01000166.1 <> na Primary Assembly 9887 na Contig1839 unplaced-scaffold na na WEST01000167.1 <> na Primary Assembly 9871 na Contig273 unplaced-scaffold na na WEST01000168.1 <> na Primary Assembly 9866 na scaffold424.1:size9835 unplaced-scaffold na na WEST01000169.1 <> na Primary Assembly 9835 na Contig292 unplaced-scaffold na na WEST01000170.1 <> na Primary Assembly 9834 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Assembly 9513 na Contig1175 unplaced-scaffold na na WEST01000193.1 <> na Primary Assembly 9506 na scaffold5809.1:size9499 unplaced-scaffold na na WEST01000194.1 <> na Primary Assembly 9499 na scaffold3799.1:size9495 unplaced-scaffold na na WEST01000195.1 <> na Primary Assembly 9495 na scaffold1294.1:size9478 unplaced-scaffold na na WEST01000196.1 <> na Primary Assembly 9478 na Contig45 unplaced-scaffold na na WEST01000197.1 <> na Primary Assembly 9456 na Contig112 unplaced-scaffold na na WEST01000198.1 <> na Primary Assembly 9445 na Contig105 unplaced-scaffold na na WEST01000199.1 <> na Primary Assembly 9426 na Contig147 unplaced-scaffold na na WEST01000200.1 <> na Primary Assembly 9421 na Contig64 unplaced-scaffold na na WEST01000201.1 <> na Primary Assembly 9408 na scaffold205.1:size9408 unplaced-scaffold na na WEST01000202.1 <> na Primary Assembly 9408 na Contig33 unplaced-scaffold na na WEST01000203.1 <> na Primary Assembly 9398 na scaffold1967.1:size9337 unplaced-scaffold na na 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