# Assembly name: ASM1103441v1 # Organism name: Fusarium oxysporum (ascomycetes) # Infraspecific name: strain=EtdFoc-247 # Taxid: 5507 # BioSample: SAMN07711071 # BioProject: PRJNA412392 # Submitter: Cook Lab - University of California at Davis # Date: 2020-02-27 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: WEUC01 # Assembly method: SPAdes v. 3.10.1 # Expected final version: yes # Genome coverage: 144.2593493x # Sequencing technology: Illumina # GenBank assembly accession: GCA_011034415.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_011034425.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold1.1:size277139 unplaced-scaffold na na WEUC01000001.1 <> na Primary Assembly 277139 na scaffold29.1:size243607 unplaced-scaffold na na WEUC01000002.1 <> na Primary Assembly 243607 na scaffold22.1:size241209 unplaced-scaffold na na WEUC01000003.1 <> na Primary Assembly 241209 na scaffold31.1:size227789 unplaced-scaffold na na WEUC01000004.1 <> na Primary Assembly 227789 na scaffold42.1:size223987 unplaced-scaffold na na WEUC01000005.1 <> na Primary Assembly 223987 na scaffold36.1:size220616 unplaced-scaffold na na WEUC01000006.1 <> na Primary Assembly 220616 na scaffold12.1:size207786 unplaced-scaffold na na WEUC01000007.1 <> na Primary Assembly 207786 na scaffold40.1:size204846 unplaced-scaffold na na WEUC01000008.1 <> na Primary Assembly 204846 na scaffold13.1:size190633 unplaced-scaffold na na WEUC01000009.1 <> na Primary Assembly 190633 na scaffold21.1:size189330 unplaced-scaffold na na WEUC01000010.1 <> na Primary Assembly 189330 na scaffold10.1:size186217 unplaced-scaffold na na WEUC01000011.1 <> na Primary Assembly 186217 na scaffold9.1:size182763 unplaced-scaffold na na WEUC01000012.1 <> na Primary Assembly 182763 na scaffold27.1:size176788 unplaced-scaffold na na WEUC01000013.1 <> na Primary Assembly 176788 na scaffold2.1:size174925 unplaced-scaffold na na WEUC01000014.1 <> na Primary Assembly 174925 na scaffold18.1:size171761 unplaced-scaffold na na WEUC01000015.1 <> na Primary Assembly 171761 na scaffold4.1:size171347 unplaced-scaffold na na WEUC01000016.1 <> na Primary Assembly 171347 na scaffold41.1:size169827 unplaced-scaffold na na WEUC01000017.1 <> na Primary Assembly 169827 na scaffold56.1:size162949 unplaced-scaffold na na WEUC01000018.1 <> na Primary Assembly 162949 na scaffold46.1:size158266 unplaced-scaffold na na WEUC01000019.1 <> na Primary Assembly 158266 na scaffold5.1:size153498 unplaced-scaffold na na WEUC01000020.1 <> na Primary Assembly 153498 na scaffold8.1:size152816 unplaced-scaffold na na WEUC01000021.1 <> na Primary Assembly 152816 na scaffold65.1:size139067 unplaced-scaffold na na WEUC01000022.1 <> na Primary Assembly 139067 na scaffold23.1:size138405 unplaced-scaffold na na WEUC01000023.1 <> na Primary Assembly 138405 na scaffold16.1:size131691 unplaced-scaffold na na WEUC01000024.1 <> na Primary Assembly 131691 na scaffold17.1:size128048 unplaced-scaffold na na WEUC01000025.1 <> na Primary Assembly 128048 na scaffold19.1:size126627 unplaced-scaffold na na WEUC01000026.1 <> na Primary Assembly 126627 na scaffold172.1:size125797 unplaced-scaffold na na WEUC01000027.1 <> na Primary Assembly 125797 na scaffold50.1:size118588 unplaced-scaffold na na WEUC01000028.1 <> na Primary Assembly 118588 na scaffold44.1:size115414 unplaced-scaffold na na WEUC01000029.1 <> na Primary Assembly 115414 na scaffold25.1:size114274 unplaced-scaffold na na WEUC01000030.1 <> na Primary Assembly 114274 na scaffold24.1:size109032 unplaced-scaffold na na WEUC01000031.1 <> na Primary Assembly 109032 na scaffold6.1:size104329 unplaced-scaffold na na WEUC01000032.1 <> na Primary Assembly 104329 na scaffold49.1:size103618 unplaced-scaffold na na WEUC01000033.1 <> na Primary Assembly 103618 na scaffold15.1:size103319 unplaced-scaffold na na WEUC01000034.1 <> na Primary Assembly 103319 na scaffold26.1:size101835 unplaced-scaffold na na WEUC01000035.1 <> na Primary Assembly 101835 na scaffold3.1:size101080 unplaced-scaffold na na WEUC01000036.1 <> na Primary Assembly 101080 na scaffold53.1:size98646 unplaced-scaffold na na WEUC01000037.1 <> na Primary Assembly 98646 na scaffold78.1:size97347 unplaced-scaffold na na WEUC01000038.1 <> na Primary Assembly 97347 na scaffold54.1:size93587 unplaced-scaffold na na WEUC01000039.1 <> na Primary Assembly 93587 na scaffold69.1:size91670 unplaced-scaffold na na WEUC01000040.1 <> na Primary Assembly 91670 na scaffold7.1:size88619 unplaced-scaffold na na WEUC01000041.1 <> na Primary Assembly 88619 na scaffold91.1:size86552 unplaced-scaffold na na WEUC01000042.1 <> na Primary Assembly 86552 na scaffold45.1:size84078 unplaced-scaffold na na WEUC01000043.1 <> na Primary Assembly 84078 na scaffold20.1:size83642 unplaced-scaffold na na WEUC01000044.1 <> na Primary Assembly 83642 na scaffold34.1:size83183 unplaced-scaffold na na WEUC01000045.1 <> na Primary Assembly 83183 na scaffold70.1:size80553 unplaced-scaffold na na WEUC01000046.1 <> na Primary Assembly 80553 na scaffold14.1:size80432 unplaced-scaffold na na WEUC01000047.1 <> na Primary Assembly 80432 na scaffold43.1:size79158 unplaced-scaffold na na WEUC01000048.1 <> na Primary Assembly 79158 na scaffold63.1:size78941 unplaced-scaffold na na WEUC01000049.1 <> na Primary Assembly 78941 na scaffold39.1:size78618 unplaced-scaffold na na WEUC01000050.1 <> na Primary Assembly 78618 na scaffold100.1:size78508 unplaced-scaffold na na WEUC01000051.1 <> na Primary Assembly 78508 na scaffold84.1:size77470 unplaced-scaffold na na WEUC01000052.1 <> na Primary Assembly 77470 na scaffold122.1:size76830 unplaced-scaffold na na WEUC01000053.1 <> na Primary Assembly 76830 na scaffold72.1:size76605 unplaced-scaffold na na WEUC01000054.1 <> na Primary Assembly 76605 na scaffold11.1:size74552 unplaced-scaffold na na WEUC01000055.1 <> na Primary Assembly 74552 na scaffold35.1:size71275 unplaced-scaffold na na WEUC01000056.1 <> na Primary Assembly 71275 na scaffold30.1:size71041 unplaced-scaffold na na WEUC01000057.1 <> na Primary Assembly 71041 na scaffold83.1:size70150 unplaced-scaffold na na WEUC01000058.1 <> na Primary Assembly 70150 na scaffold73.1:size70061 unplaced-scaffold na na WEUC01000059.1 <> na Primary Assembly 70061 na Contig239 unplaced-scaffold na na WEUC01000060.1 <> na Primary Assembly 69567 na scaffold55.1:size68268 unplaced-scaffold na na WEUC01000061.1 <> na Primary Assembly 68268 na scaffold60.1:size67208 unplaced-scaffold na na WEUC01000062.1 <> na Primary Assembly 67208 na scaffold136.1:size66143 unplaced-scaffold na na WEUC01000063.1 <> na Primary Assembly 66143 na scaffold87.1:size62493 unplaced-scaffold na na WEUC01000064.1 <> na Primary Assembly 62493 na scaffold101.1:size60608 unplaced-scaffold na na WEUC01000065.1 <> na Primary Assembly 60608 na scaffold77.1:size59763 unplaced-scaffold na na WEUC01000066.1 <> na Primary Assembly 59763 na scaffold59.1:size57309 unplaced-scaffold na na WEUC01000067.1 <> na Primary Assembly 57309 na scaffold37.1:size57017 unplaced-scaffold na na WEUC01000068.1 <> na Primary Assembly 57017 na scaffold124.1:size56992 unplaced-scaffold na na WEUC01000069.1 <> na Primary Assembly 56992 na scaffold52.1:size56082 unplaced-scaffold na na WEUC01000070.1 <> na Primary Assembly 56082 na scaffold32.1:size55496 unplaced-scaffold na na WEUC01000071.1 <> na Primary Assembly 55496 na scaffold51.1:size55310 unplaced-scaffold na na WEUC01000072.1 <> na Primary Assembly 55310 na scaffold33.1:size54622 unplaced-scaffold na na WEUC01000073.1 <> na Primary Assembly 54622 na scaffold223.1:size53707 unplaced-scaffold na na WEUC01000074.1 <> na Primary Assembly 53707 na scaffold61.1:size53432 unplaced-scaffold na na WEUC01000075.1 <> na Primary Assembly 53432 na scaffold71.1:size53285 unplaced-scaffold na na WEUC01000076.1 <> na Primary Assembly 53285 na scaffold613.1:size53011 unplaced-scaffold na na WEUC01000077.1 <> na Primary Assembly 53011 na scaffold88.1:size52154 unplaced-scaffold na na WEUC01000078.1 <> na Primary Assembly 52154 na scaffold571.1:size51642 unplaced-scaffold na na WEUC01000079.1 <> na Primary Assembly 51642 na scaffold57.1:size51201 unplaced-scaffold na na WEUC01000080.1 <> na Primary Assembly 51201 na scaffold89.1:size49261 unplaced-scaffold na na WEUC01000081.1 <> na Primary Assembly 49261 na scaffold79.1:size48611 unplaced-scaffold na na WEUC01000082.1 <> na Primary Assembly 48611 na scaffold28.1:size48232 unplaced-scaffold na na WEUC01000083.1 <> na Primary Assembly 48232 na Contig241 unplaced-scaffold na na WEUC01000084.1 <> na Primary Assembly 47862 na scaffold117.1:size47777 unplaced-scaffold na na WEUC01000085.1 <> na Primary Assembly 47777 na scaffold239.1:size47492 unplaced-scaffold na na WEUC01000086.1 <> na Primary Assembly 47492 na scaffold58.1:size46790 unplaced-scaffold na na WEUC01000087.1 <> na Primary Assembly 46790 na Contig48 unplaced-scaffold na na WEUC01000088.1 <> na Primary Assembly 46738 na scaffold80.1:size46637 unplaced-scaffold na na WEUC01000089.1 <> na Primary Assembly 46637 na scaffold1371.1:size46615 unplaced-scaffold na na WEUC01000090.1 <> na Primary Assembly 46615 na scaffold48.1:size46484 unplaced-scaffold na na WEUC01000091.1 <> na Primary Assembly 46484 na scaffold668.1:size46167 unplaced-scaffold na na WEUC01000092.1 <> na Primary Assembly 46167 na scaffold114.1:size46094 unplaced-scaffold na na WEUC01000093.1 <> na Primary Assembly 46094 na scaffold93.1:size45933 unplaced-scaffold na na WEUC01000094.1 <> na Primary Assembly 45933 na scaffold66.1:size45731 unplaced-scaffold na na WEUC01000095.1 <> na Primary Assembly 45731 na scaffold129.1:size45703 unplaced-scaffold na na WEUC01000096.1 <> na Primary Assembly 45703 na scaffold76.1:size45615 unplaced-scaffold na na WEUC01000097.1 <> na Primary Assembly 45615 na scaffold263.1:size45441 unplaced-scaffold na na WEUC01000098.1 <> na Primary Assembly 45441 na scaffold187.1:size45382 unplaced-scaffold na na WEUC01000099.1 <> na Primary Assembly 45382 na scaffold147.1:size45228 unplaced-scaffold na na WEUC01000100.1 <> na Primary Assembly 45228 na scaffold319.1:size44673 unplaced-scaffold na na WEUC01000101.1 <> na Primary Assembly 44673 na scaffold163.1:size44628 unplaced-scaffold na na WEUC01000102.1 <> na Primary Assembly 44628 na scaffold38.1:size44283 unplaced-scaffold na na WEUC01000103.1 <> na Primary Assembly 44283 na scaffold630.1:size44097 unplaced-scaffold na na WEUC01000104.1 <> na Primary Assembly 44097 na scaffold389.1:size43838 unplaced-scaffold na na WEUC01000105.1 <> na Primary Assembly 43838 na scaffold1118.1:size43040 unplaced-scaffold na na WEUC01000106.1 <> na Primary Assembly 43040 na Contig177 unplaced-scaffold na na WEUC01000107.1 <> na Primary Assembly 43009 na scaffold99.1:size42983 unplaced-scaffold na na WEUC01000108.1 <> na Primary Assembly 42983 na Contig2 unplaced-scaffold na na WEUC01000109.1 <> na Primary Assembly 42975 na Contig27 unplaced-scaffold na na WEUC01000110.1 <> na Primary Assembly 42246 na scaffold104.1:size42204 unplaced-scaffold na na WEUC01000111.1 <> na Primary Assembly 42204 na scaffold102.1:size42098 unplaced-scaffold na na WEUC01000112.1 <> na Primary Assembly 42098 na scaffold1168.1:size41856 unplaced-scaffold na na WEUC01000113.1 <> na Primary Assembly 41856 na scaffold169.1:size41611 unplaced-scaffold na na WEUC01000114.1 <> na Primary Assembly 41611 na scaffold230.1:size41587 unplaced-scaffold na na WEUC01000115.1 <> na Primary Assembly 41587 na Contig36 unplaced-scaffold na na WEUC01000116.1 <> na Primary Assembly 41464 na scaffold160.1:size41409 unplaced-scaffold na na WEUC01000117.1 <> na Primary Assembly 41409 na Contig684 unplaced-scaffold na na WEUC01000118.1 <> na Primary Assembly 41363 na scaffold196.1:size41230 unplaced-scaffold na na WEUC01000119.1 <> na Primary Assembly 41230 na scaffold423.1:size40820 unplaced-scaffold na na WEUC01000120.1 <> na Primary Assembly 40820 na Contig119 unplaced-scaffold na na WEUC01000121.1 <> na Primary Assembly 40635 na scaffold408.1:size40474 unplaced-scaffold na na WEUC01000122.1 <> na Primary Assembly 40474 na Contig107 unplaced-scaffold na na WEUC01000123.1 <> na Primary Assembly 40454 na scaffold107.1:size40408 unplaced-scaffold na na WEUC01000124.1 <> na Primary Assembly 40408 na Contig83 unplaced-scaffold na na WEUC01000125.1 <> na Primary Assembly 40340 na Contig852 unplaced-scaffold na na WEUC01000126.1 <> na Primary Assembly 40295 na Contig41 unplaced-scaffold na na WEUC01000127.1 <> na Primary Assembly 40143 na scaffold47.1:size40095 unplaced-scaffold na na WEUC01000128.1 <> na Primary Assembly 40095 na Contig176 unplaced-scaffold na na WEUC01000129.1 <> na Primary Assembly 39853 na Contig14 unplaced-scaffold na na WEUC01000130.1 <> na Primary Assembly 39622 na scaffold74.1:size39605 unplaced-scaffold na na WEUC01000131.1 <> na Primary Assembly 39605 na scaffold384.1:size39601 unplaced-scaffold na na WEUC01000132.1 <> na Primary Assembly 39601 na scaffold1222.1:size39553 unplaced-scaffold na na WEUC01000133.1 <> na Primary Assembly 39553 na scaffold164.1:size39350 unplaced-scaffold na na WEUC01000134.1 <> na Primary Assembly 39350 na Contig13 unplaced-scaffold na na WEUC01000135.1 <> na Primary Assembly 39191 na scaffold1574.1:size38537 unplaced-scaffold na na WEUC01000136.1 <> na Primary Assembly 38537 na scaffold289.1:size38468 unplaced-scaffold na na WEUC01000137.1 <> na Primary Assembly 38468 na scaffold141.1:size38463 unplaced-scaffold na na WEUC01000138.1 <> na Primary Assembly 38463 na scaffold665.1:size38438 unplaced-scaffold na na WEUC01000139.1 <> na Primary Assembly 38438 na scaffold324.1:size38217 unplaced-scaffold na na WEUC01000140.1 <> na Primary Assembly 38217 na scaffold152.1:size38091 unplaced-scaffold na na WEUC01000141.1 <> na Primary Assembly 38091 na Contig15 unplaced-scaffold na na WEUC01000142.1 <> na Primary Assembly 38087 na scaffold167.1:size37902 unplaced-scaffold na na WEUC01000143.1 <> na Primary Assembly 37902 na scaffold92.1:size37848 unplaced-scaffold na na WEUC01000144.1 <> na Primary Assembly 37848 na Contig35 unplaced-scaffold na na WEUC01000145.1 <> na Primary Assembly 37818 na Contig32 unplaced-scaffold na na WEUC01000146.1 <> na Primary Assembly 37598 na scaffold622.1:size37561 unplaced-scaffold na na WEUC01000147.1 <> na Primary Assembly 37561 na scaffold154.1:size37558 unplaced-scaffold na na WEUC01000148.1 <> na Primary Assembly 37558 na Contig25 unplaced-scaffold na na WEUC01000149.1 <> na Primary Assembly 37531 na Contig57 unplaced-scaffold na na WEUC01000150.1 <> na Primary Assembly 37208 na scaffold148.1:size37069 unplaced-scaffold na na WEUC01000151.1 <> na Primary Assembly 37069 na scaffold95.1:size37043 unplaced-scaffold na na WEUC01000152.1 <> na Primary Assembly 37043 na Contig28 unplaced-scaffold na na WEUC01000153.1 <> na Primary Assembly 36815 na scaffold182.1:size36662 unplaced-scaffold na na WEUC01000154.1 <> na Primary Assembly 36662 na scaffold82.1:size36584 unplaced-scaffold na na WEUC01000155.1 <> na Primary Assembly 36584 na scaffold67.1:size36487 unplaced-scaffold na na WEUC01000156.1 <> na Primary Assembly 36487 na scaffold307.1:size36468 unplaced-scaffold na na WEUC01000157.1 <> na Primary Assembly 36468 na Contig89 unplaced-scaffold na na WEUC01000158.1 <> na Primary Assembly 36467 na scaffold306.1:size36118 unplaced-scaffold na na WEUC01000159.1 <> na Primary Assembly 36118 na Contig50 unplaced-scaffold na na WEUC01000160.1 <> na Primary Assembly 36085 na scaffold123.1:size36074 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33791 na scaffold791.1:size33784 unplaced-scaffold na na WEUC01000183.1 <> na Primary Assembly 33784 na Contig118 unplaced-scaffold na na WEUC01000184.1 <> na Primary Assembly 33686 na scaffold184.1:size33603 unplaced-scaffold na na WEUC01000185.1 <> na Primary Assembly 33603 na scaffold62.1:size33439 unplaced-scaffold na na WEUC01000186.1 <> na Primary Assembly 33439 na scaffold478.1:size33427 unplaced-scaffold na na WEUC01000187.1 <> na Primary Assembly 33427 na scaffold343.1:size33376 unplaced-scaffold na na WEUC01000188.1 <> na Primary Assembly 33376 na scaffold379.1:size33346 unplaced-scaffold na na WEUC01000189.1 <> na Primary Assembly 33346 na Contig52 unplaced-scaffold na na WEUC01000190.1 <> na Primary Assembly 33341 na scaffold207.1:size33248 unplaced-scaffold na na WEUC01000191.1 <> na Primary Assembly 33248 na Contig46 unplaced-scaffold na na WEUC01000192.1 <> na Primary Assembly 33166 na scaffold115.1:size33083 unplaced-scaffold na na WEUC01000193.1 <> na Primary Assembly 33083 na scaffold723.1:size32784 unplaced-scaffold na na WEUC01000194.1 <> na Primary Assembly 32784 na scaffold64.1:size32783 unplaced-scaffold na na WEUC01000195.1 <> na Primary Assembly 32783 na scaffold1685.1:size32658 unplaced-scaffold na na WEUC01000196.1 <> na Primary Assembly 32658 na scaffold215.1:size32628 unplaced-scaffold na na WEUC01000197.1 <> na Primary Assembly 32628 na scaffold678.1:size32594 unplaced-scaffold na na WEUC01000198.1 <> na Primary Assembly 32594 na scaffold805.1:size32547 unplaced-scaffold na na WEUC01000199.1 <> na Primary Assembly 32547 na scaffold395.1:size32424 unplaced-scaffold na na WEUC01000200.1 <> na Primary Assembly 32424 na Contig79 unplaced-scaffold na na WEUC01000201.1 <> na Primary Assembly 32394 na Contig525 unplaced-scaffold na na WEUC01000202.1 <> na Primary Assembly 32378 na scaffold869.1:size32376 unplaced-scaffold na na WEUC01000203.1 <> na Primary Assembly 32376 na scaffold145.1:size32363 unplaced-scaffold na na WEUC01000204.1 <> na Primary Assembly 32363 na scaffold121.1:size32111 unplaced-scaffold na na WEUC01000205.1 <> na Primary Assembly 32111 na scaffold68.1:size32055 unplaced-scaffold na na WEUC01000206.1 <> na Primary Assembly 32055 na Contig45 unplaced-scaffold na na WEUC01000207.1 <> na Primary Assembly 32020 na scaffold557.1:size31971 unplaced-scaffold na na WEUC01000208.1 <> na Primary Assembly 31971 na scaffold685.1:size31915 unplaced-scaffold na na WEUC01000209.1 <> na Primary Assembly 31915 na scaffold602.1:size31826 unplaced-scaffold na na WEUC01000210.1 <> na Primary Assembly 31826 na scaffold333.1:size31738 unplaced-scaffold na na WEUC01000211.1 <> na Primary Assembly 31738 na scaffold210.1:size31662 unplaced-scaffold na na WEUC01000212.1 <> na Primary Assembly 31662 na Contig29 unplaced-scaffold na na WEUC01000213.1 <> na Primary Assembly 31628 na scaffold387.1:size31607 unplaced-scaffold na na WEUC01000214.1 <> na Primary Assembly 31607 na scaffold783.1:size31589 unplaced-scaffold na na 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