# Assembly name: mArvNil1.pat.X # Organism name: Arvicanthis niloticus (Nile rat) # Isolate: mArvNil1 # Sex: male # Taxid: 61156 # BioSample: SAMN12611849 # BioProject: PRJNA608735 # Submitter: Vertebrate Genomes Project # Date: 2024-10-22 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAAOMG01 # Assembly method: TrioCanu v. 1.8; purge_dups v. 1.0.0; Scaff 10x v. 4.1.0; Bionano solve v. 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow polishing and gap filling v. smrtlink_6.0.0.47841; Freebayes v. 1.3.1; gEVAL manual curation v. 2020-01-16; VGP trio assembly pipeline v. 1.6 # Expected final version: no # Genome coverage: 60.95x # Sequencing technology: PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS # RefSeq category: Reference Genome # GenBank assembly accession: GCA_011762505.2 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_011762575.2 Primary Assembly ## GCA_011762585.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM022251.1 <> na Primary Assembly 167116563 na SUPER_2 assembled-molecule 2 Chromosome CM022252.1 <> na Primary Assembly 149323608 na SUPER_3 assembled-molecule 3 Chromosome CM022253.1 <> na Primary Assembly 139271591 na SUPER_4 assembled-molecule 4 Chromosome CM022254.1 <> na Primary Assembly 135118099 na SUPER_5 assembled-molecule 5 Chromosome CM022255.1 <> na Primary Assembly 108691040 na SUPER_6 assembled-molecule 6 Chromosome CM022256.1 <> na Primary Assembly 108648001 na SUPER_7 assembled-molecule 7 Chromosome CM022257.1 <> na Primary Assembly 91426705 na SUPER_8 assembled-molecule 8 Chromosome CM022258.1 <> na Primary Assembly 88234701 na SUPER_9 assembled-molecule 9 Chromosome CM022259.1 <> na Primary Assembly 86386494 na SUPER_10 assembled-molecule 10 Chromosome CM022260.1 <> na Primary Assembly 82689117 na SUPER_11 assembled-molecule 11 Chromosome CM022261.1 <> na Primary Assembly 80941235 na SUPER_12 assembled-molecule 12 Chromosome CM022262.1 <> na Primary Assembly 79553684 na SUPER_13 assembled-molecule 13 Chromosome CM022263.1 <> na Primary Assembly 78041482 na SUPER_14 assembled-molecule 14 Chromosome CM022264.1 <> na Primary Assembly 76397992 na SUPER_15 assembled-molecule 15 Chromosome CM022265.1 <> na Primary Assembly 73895232 na SUPER_16 assembled-molecule 16 Chromosome CM022266.1 <> na Primary Assembly 73423486 na SUPER_17 assembled-molecule 17 Chromosome CM022267.1 <> na Primary Assembly 64041812 na SUPER_18 assembled-molecule 18 Chromosome CM022268.1 <> na Primary Assembly 54839141 na SUPER_19 assembled-molecule 19 Chromosome CM022269.1 <> na Primary Assembly 53135676 na SUPER_20 assembled-molecule 20 Chromosome CM022270.1 <> na Primary Assembly 52431192 na SUPER_21 assembled-molecule 21 Chromosome CM022271.1 <> na Primary Assembly 52083330 na SUPER_X assembled-molecule X Chromosome CM022272.1 <> na Primary Assembly 130353335 na SUPER_Y assembled-molecule Y Chromosome CM092628.1 <> na Primary Assembly 14370014 na SUPER_Y_unloc_1 unlocalized-scaffold Y Chromosome JAAOMG010000040.1 <> na Primary Assembly 6376363 na SUPER_Y_unloc_2 unlocalized-scaffold Y Chromosome JAAOMG010000041.1 <> na Primary Assembly 6247218 na SUPER_Y_unloc_3 unlocalized-scaffold Y Chromosome JAAOMG010000042.1 <> na Primary Assembly 2823301 na S1 unplaced-scaffold na na JAAOMG010000001.1 <> na Primary Assembly 234059 na S7 unplaced-scaffold na na JAAOMG010000007.1 <> na Primary Assembly 1111592 na S10 unplaced-scaffold na na JAAOMG010000009.1 <> na Primary Assembly 1562849 na SUPER_22 unplaced-scaffold na na JAAOMG010000025.1 <> na Primary Assembly 52023101 na SUPER_30 unplaced-scaffold na na JAAOMG010000026.1 <> na Primary Assembly 24866245 na SUPER_29 unplaced-scaffold na na JAAOMG010000027.1 <> na Primary Assembly 26039138 na SUPER_23 unplaced-scaffold na na JAAOMG010000028.1 <> na Primary Assembly 47239466 na SUPER_24 unplaced-scaffold na na JAAOMG010000029.1 <> na Primary Assembly 45452853 na SUPER_25 unplaced-scaffold na na JAAOMG010000030.1 <> na Primary Assembly 42530208 na SUPER_27 unplaced-scaffold na na JAAOMG010000031.1 <> na Primary Assembly 29520544 na S33 unplaced-scaffold na na JAAOMG010000032.1 <> na Primary Assembly 1440610 na SUPER_28 unplaced-scaffold na na JAAOMG010000033.1 <> na Primary Assembly 27530837 na SUPER_26 unplaced-scaffold na na JAAOMG010000034.1 <> na Primary Assembly 40139754 na S36 unplaced-scaffold na na JAAOMG010000035.1 <> na Primary Assembly 507294 na S37 unplaced-scaffold na na JAAOMG010000036.1 <> na Primary Assembly 468694 na SUPER_Y_unloc_5 unplaced-scaffold na na JAAOMG010000037.1 <> na Primary Assembly 1629355 na SUPER_Y_unloc_4 unplaced-scaffold na na JAAOMG010000038.1 <> na Primary Assembly 2809651 na SUPER_Y_unloc_6 unplaced-scaffold na na JAAOMG010000043.1 <> na Primary Assembly 1360143 na SUPER_Y_unloc_7 unplaced-scaffold na na JAAOMG010000044.1 <> na Primary Assembly 969310 na SUPER_Y_unloc_8 unplaced-scaffold na na JAAOMG010000045.1 <> na Primary Assembly 665014 na SUPER_Y_unloc_10 unplaced-scaffold na na JAAOMG010000046.1 <> na Primary Assembly 574795 na SUPER_Y_unloc_9 unplaced-scaffold na na JAAOMG010000047.1 <> na Primary Assembly 575096 na SUPER_Y_unloc_11 unplaced-scaffold na na JAAOMG010000048.1 <> na Primary Assembly 310141 na SUPER_Y_unloc_12 unplaced-scaffold na na JAAOMG010000049.1 <> na Primary Assembly 301522 na SUPER_Y_unloc_13 unplaced-scaffold na na JAAOMG010000050.1 <> na Primary Assembly 272425 na SUPER_Y_unloc_14 unplaced-scaffold na na JAAOMG010000051.1 <> na Primary Assembly 257934 na SUPER_Y_unloc_15 unplaced-scaffold na na JAAOMG010000052.1 <> na Primary Assembly 238507 na SUPER_Y_unloc_16 unplaced-scaffold na na JAAOMG010000053.1 <> na Primary Assembly 206894 na SUPER_Y_unloc_17 unplaced-scaffold na na JAAOMG010000054.1 <> na Primary Assembly 196782 na SUPER_Y_unloc_18 unplaced-scaffold na na JAAOMG010000055.1 <> na Primary Assembly 186145 na SUPER_Y_unloc_19 unplaced-scaffold na na JAAOMG010000056.1 <> na Primary Assembly 152420 na SUPER_Y_unloc_20 unplaced-scaffold na na JAAOMG010000057.1 <> na Primary Assembly 151576 na SUPER_Y_unloc_21 unplaced-scaffold na na JAAOMG010000058.1 <> na Primary Assembly 151483 na SUPER_Y_unloc_22 unplaced-scaffold na na JAAOMG010000059.1 <> na Primary Assembly 148967 na SUPER_Y_unloc_23 unplaced-scaffold na na JAAOMG010000060.1 <> na Primary Assembly 138651 na SUPER_Y_unloc_24 unplaced-scaffold na na JAAOMG010000061.1 <> na Primary Assembly 135680 na SUPER_Y_unloc_25 unplaced-scaffold na na JAAOMG010000062.1 <> na Primary Assembly 117071 na SUPER_Y_unloc_26 unplaced-scaffold na na JAAOMG010000063.1 <> na Primary Assembly 97236 na SUPER_Y_unloc_27 unplaced-scaffold na na JAAOMG010000064.1 <> na Primary Assembly 89791 na SUPER_Y_unloc_28 unplaced-scaffold na na JAAOMG010000065.1 <> na Primary Assembly 88876 na SUPER_Y_unloc_29 unplaced-scaffold na na JAAOMG010000066.1 <> na Primary Assembly 77190 na S42 unplaced-scaffold na na JAAOMG010000067.1 <> na Primary Assembly 163846 na S45 unplaced-scaffold na na JAAOMG010000068.1 <> na Primary Assembly 133613 na S46 unplaced-scaffold na na JAAOMG010000069.1 <> na Primary Assembly 99109 na S47 unplaced-scaffold na na JAAOMG010000070.1 <> na Primary Assembly 95456 na S48 unplaced-scaffold na na JAAOMG010000071.1 <> na Primary Assembly 92901 na pat_scaffold_65_arrow_ctg1 unplaced-scaffold na na JAAOMG010000072.1 <> na Primary Assembly 491570 na pat_scaffold_67_arrow_ctg1 unplaced-scaffold na na JAAOMG010000073.1 <> na Primary Assembly 452522 na pat_scaffold_69_arrow_ctg1 unplaced-scaffold na na JAAOMG010000074.1 <> na Primary Assembly 437572 na pat_scaffold_70_arrow_ctg1 unplaced-scaffold na na JAAOMG010000075.1 <> na Primary Assembly 419470 na pat_scaffold_72_arrow_ctg1 unplaced-scaffold na na JAAOMG010000076.1 <> na Primary Assembly 363772 na pat_scaffold_73_arrow_ctg1 unplaced-scaffold na na JAAOMG010000077.1 <> na Primary Assembly 354479 na pat_scaffold_74_arrow_ctg1 unplaced-scaffold na na JAAOMG010000078.1 <> na Primary Assembly 348689 na pat_scaffold_75_arrow_ctg1 unplaced-scaffold na na JAAOMG010000079.1 <> na Primary Assembly 342770 na pat_scaffold_77_arrow_ctg1 unplaced-scaffold na na JAAOMG010000080.1 <> na Primary Assembly 320560 na pat_scaffold_78_arrow_ctg1 unplaced-scaffold na na JAAOMG010000081.1 <> na Primary Assembly 315697 na pat_scaffold_82_arrow_ctg1 unplaced-scaffold na na JAAOMG010000082.1 <> na Primary Assembly 299711 na pat_scaffold_85_arrow_ctg1 unplaced-scaffold na na JAAOMG010000083.1 <> na Primary Assembly 281410 na pat_scaffold_92_arrow_ctg1 unplaced-scaffold na na JAAOMG010000084.1 <> na Primary Assembly 232368 na pat_scaffold_94_arrow_ctg1 unplaced-scaffold na na JAAOMG010000085.1 <> na Primary Assembly 227237 na pat_scaffold_98_arrow_ctg1 unplaced-scaffold na na JAAOMG010000086.1 <> na Primary Assembly 217410 na pat_scaffold_99_arrow_ctg1 unplaced-scaffold na na JAAOMG010000087.1 <> na Primary Assembly 216834 na pat_scaffold_100_arrow_ctg1 unplaced-scaffold na na JAAOMG010000088.1 <> na Primary Assembly 216412 na pat_scaffold_101_arrow_ctg1 unplaced-scaffold na na JAAOMG010000089.1 <> na Primary Assembly 215362 na pat_scaffold_103_arrow_ctg1 unplaced-scaffold na na JAAOMG010000090.1 <> na Primary Assembly 209853 na pat_scaffold_104_arrow_ctg1 unplaced-scaffold na na JAAOMG010000091.1 <> na Primary Assembly 210202 na pat_scaffold_106_arrow_ctg1 unplaced-scaffold na na JAAOMG010000092.1 <> na Primary Assembly 207652 na pat_scaffold_107_arrow_ctg1 unplaced-scaffold na na JAAOMG010000093.1 <> na Primary Assembly 206384 na pat_scaffold_108_arrow_ctg1 unplaced-scaffold na na JAAOMG010000094.1 <> na Primary Assembly 206032 na pat_scaffold_109_arrow_ctg1 unplaced-scaffold na na JAAOMG010000095.1 <> na Primary Assembly 202684 na pat_scaffold_110_arrow_ctg1 unplaced-scaffold na na JAAOMG010000096.1 <> na Primary Assembly 198301 na pat_scaffold_111_arrow_ctg1 unplaced-scaffold na na JAAOMG010000097.1 <> na Primary Assembly 198262 na pat_scaffold_113_arrow_ctg1 unplaced-scaffold na na JAAOMG010000098.1 <> na Primary Assembly 195563 na pat_scaffold_114_arrow_ctg1 unplaced-scaffold na na JAAOMG010000099.1 <> na Primary Assembly 193627 na pat_scaffold_115_arrow_ctg1 unplaced-scaffold na na JAAOMG010000100.1 <> na Primary Assembly 189290 na pat_scaffold_116_arrow_ctg1 unplaced-scaffold na na JAAOMG010000101.1 <> na Primary Assembly 186884 na pat_scaffold_118_arrow_ctg1 unplaced-scaffold na na JAAOMG010000102.1 <> na Primary Assembly 185828 na pat_scaffold_119_arrow_ctg1 unplaced-scaffold na na JAAOMG010000103.1 <> na Primary Assembly 185477 na pat_scaffold_121_arrow_ctg1 unplaced-scaffold na na JAAOMG010000104.1 <> na Primary Assembly 185908 na pat_scaffold_122_arrow_ctg1 unplaced-scaffold na na JAAOMG010000105.1 <> na Primary Assembly 185439 na pat_scaffold_123_arrow_ctg1 unplaced-scaffold na na JAAOMG010000106.1 <> na Primary Assembly 182226 na pat_scaffold_124_arrow_ctg1 unplaced-scaffold na na JAAOMG010000107.1 <> na Primary Assembly 182226 na pat_scaffold_127_arrow_ctg1 unplaced-scaffold na na JAAOMG010000108.1 <> na Primary Assembly 178792 na pat_scaffold_128_arrow_ctg1 unplaced-scaffold na na JAAOMG010000109.1 <> na Primary Assembly 178150 na pat_scaffold_129_arrow_ctg1 unplaced-scaffold na na JAAOMG010000110.1 <> na Primary Assembly 174500 na pat_scaffold_130_arrow_ctg1 unplaced-scaffold na na JAAOMG010000111.1 <> na Primary Assembly 174118 na pat_scaffold_131_arrow_ctg1 unplaced-scaffold na na JAAOMG010000112.1 <> na Primary Assembly 172458 na pat_scaffold_132_arrow_ctg1 unplaced-scaffold na na JAAOMG010000113.1 <> na Primary Assembly 170320 na pat_scaffold_133_arrow_ctg1 unplaced-scaffold na na JAAOMG010000114.1 <> na Primary Assembly 169275 na pat_scaffold_134_arrow_ctg1 unplaced-scaffold na na JAAOMG010000115.1 <> na Primary Assembly 167067 na pat_scaffold_135_arrow_ctg1 unplaced-scaffold na na JAAOMG010000116.1 <> na Primary Assembly 166304 na pat_scaffold_136_arrow_ctg1 unplaced-scaffold na na JAAOMG010000117.1 <> na Primary Assembly 165971 na pat_scaffold_137_arrow_ctg1 unplaced-scaffold na na JAAOMG010000118.1 <> na Primary Assembly 165289 na pat_scaffold_138_arrow_ctg1 unplaced-scaffold na na JAAOMG010000119.1 <> na Primary Assembly 164465 na pat_scaffold_140_arrow_ctg1 unplaced-scaffold na na JAAOMG010000120.1 <> na Primary Assembly 162520 na pat_scaffold_141_arrow_ctg1 unplaced-scaffold na na JAAOMG010000121.1 <> na Primary Assembly 162048 na pat_scaffold_142_arrow_ctg1 unplaced-scaffold na na JAAOMG010000122.1 <> na Primary Assembly 161598 na pat_scaffold_143_arrow_ctg1 unplaced-scaffold na na JAAOMG010000123.1 <> na Primary Assembly 161161 na pat_scaffold_144_arrow_ctg1 unplaced-scaffold na na JAAOMG010000124.1 <> na Primary Assembly 160621 na pat_scaffold_145_arrow_ctg1 unplaced-scaffold na na JAAOMG010000125.1 <> na Primary Assembly 160066 na pat_scaffold_146_arrow_ctg1 unplaced-scaffold na na JAAOMG010000126.1 <> na Primary Assembly 157049 na pat_scaffold_147_arrow_ctg1 unplaced-scaffold na na JAAOMG010000127.1 <> na Primary Assembly 153656 na pat_scaffold_148_arrow_ctg1 unplaced-scaffold na na JAAOMG010000128.1 <> na Primary Assembly 154785 na pat_scaffold_1000_arrow_ctg1 unplaced-scaffold na na JAAOMG010000129.1 <> na Primary Assembly 50236 na pat_scaffold_1001_arrow_ctg1 unplaced-scaffold na na JAAOMG010000130.1 <> na Primary Assembly 49920 na pat_scaffold_1002_arrow_ctg1 unplaced-scaffold na na JAAOMG010000131.1 <> na Primary Assembly 50175 na pat_scaffold_1003_arrow_ctg1 unplaced-scaffold na na JAAOMG010000132.1 <> na Primary Assembly 50142 na pat_scaffold_1004_arrow_ctg1 unplaced-scaffold na na JAAOMG010000133.1 <> na Primary Assembly 50126 na pat_scaffold_1005_arrow_ctg1 unplaced-scaffold na na JAAOMG010000134.1 <> na Primary Assembly 50120 na pat_scaffold_1006_arrow_ctg1 unplaced-scaffold na na JAAOMG010000135.1 <> na Primary Assembly 50116 na pat_scaffold_1007_arrow_ctg1 unplaced-scaffold na na JAAOMG010000136.1 <> na Primary Assembly 50110 na pat_scaffold_1008_arrow_ctg1 unplaced-scaffold na na JAAOMG010000137.1 <> na Primary Assembly 50066 na pat_scaffold_1009_arrow_ctg1 unplaced-scaffold na na JAAOMG010000138.1 <> na Primary Assembly 50016 na pat_scaffold_1010_arrow_ctg1 unplaced-scaffold na na JAAOMG010000139.1 <> na Primary Assembly 49994 na pat_scaffold_1011_arrow_ctg1 unplaced-scaffold na na JAAOMG010000140.1 <> na Primary Assembly 50501 na pat_scaffold_1012_arrow_ctg1 unplaced-scaffold na na JAAOMG010000141.1 <> na Primary Assembly 49963 na pat_scaffold_1013_arrow_ctg1 unplaced-scaffold na na JAAOMG010000142.1 <> na Primary Assembly 49919 na pat_scaffold_1014_arrow_ctg1 unplaced-scaffold na na JAAOMG010000143.1 <> na Primary Assembly 49836 na pat_scaffold_1016_arrow_ctg1 unplaced-scaffold na na JAAOMG010000144.1 <> na Primary Assembly 49760 na pat_scaffold_1017_arrow_ctg1 unplaced-scaffold na na JAAOMG010000145.1 <> na Primary Assembly 49727 na pat_scaffold_1018_arrow_ctg1 unplaced-scaffold na na JAAOMG010000146.1 <> na Primary Assembly 49733 na pat_scaffold_1019_arrow_ctg1 unplaced-scaffold na na JAAOMG010000147.1 <> na Primary Assembly 49689 na pat_scaffold_1030_arrow_ctg1 unplaced-scaffold na na JAAOMG010000148.1 <> na Primary Assembly 49467 na pat_scaffold_1031_arrow_ctg1 unplaced-scaffold na na JAAOMG010000149.1 <> na Primary Assembly 49385 na pat_scaffold_1032_arrow_ctg1 unplaced-scaffold na na JAAOMG010000150.1 <> na Primary Assembly 49296 na pat_scaffold_1033_arrow_ctg1 unplaced-scaffold na na JAAOMG010000151.1 <> na Primary Assembly 49237 na pat_scaffold_1034_arrow_ctg1 unplaced-scaffold na na JAAOMG010000152.1 <> na Primary Assembly 49301 na pat_scaffold_1035_arrow_ctg1 unplaced-scaffold na na JAAOMG010000153.1 <> na Primary Assembly 49182 na pat_scaffold_1036_arrow_ctg1 unplaced-scaffold na na JAAOMG010000154.1 <> na Primary Assembly 49174 na pat_scaffold_1039_arrow_ctg1 unplaced-scaffold na na JAAOMG010000155.1 <> na Primary Assembly 49077 na pat_scaffold_1040_arrow_ctg1 unplaced-scaffold na na JAAOMG010000156.1 <> na Primary Assembly 48870 na pat_scaffold_1041_arrow_ctg1 unplaced-scaffold na na JAAOMG010000157.1 <> na Primary Assembly 48684 na pat_scaffold_1042_arrow_ctg1 unplaced-scaffold na na JAAOMG010000158.1 <> na Primary Assembly 48663 na pat_scaffold_1045_arrow_ctg1 unplaced-scaffold na na JAAOMG010000159.1 <> na Primary Assembly 48612 na pat_scaffold_1046_arrow_ctg1 unplaced-scaffold na na JAAOMG010000160.1 <> na Primary Assembly 48626 na pat_scaffold_1048_arrow_ctg1 unplaced-scaffold na na JAAOMG010000161.1 <> na Primary Assembly 48538 na pat_scaffold_1049_arrow_ctg1 unplaced-scaffold na na JAAOMG010000162.1 <> na Primary Assembly 48527 na pat_scaffold_1050_arrow_ctg1 unplaced-scaffold na na JAAOMG010000163.1 <> na Primary Assembly 48453 na pat_scaffold_1051_arrow_ctg1 unplaced-scaffold na na JAAOMG010000164.1 <> na Primary Assembly 48465 na pat_scaffold_1054_arrow_ctg1 unplaced-scaffold na na JAAOMG010000165.1 <> na Primary Assembly 48447 na pat_scaffold_1055_arrow_ctg1 unplaced-scaffold na na JAAOMG010000166.1 <> na Primary Assembly 48416 na pat_scaffold_1056_arrow_ctg1 unplaced-scaffold na na JAAOMG010000167.1 <> na Primary Assembly 48369 na pat_scaffold_1058_arrow_ctg1 unplaced-scaffold na na JAAOMG010000168.1 <> na Primary Assembly 48224 na pat_scaffold_1060_arrow_ctg1 unplaced-scaffold na na JAAOMG010000169.1 <> na Primary Assembly 48249 na pat_scaffold_1061_arrow_ctg1 unplaced-scaffold na na JAAOMG010000170.1 <> na Primary Assembly 48234 na pat_scaffold_1062_arrow_ctg1 unplaced-scaffold na na JAAOMG010000171.1 <> na Primary Assembly 48173 na pat_scaffold_1063_arrow_ctg1 unplaced-scaffold na na JAAOMG010000172.1 <> na Primary Assembly 48087 na pat_scaffold_1065_arrow_ctg1 unplaced-scaffold na na JAAOMG010000173.1 <> na Primary Assembly 47964 na pat_scaffold_1066_arrow_ctg1 unplaced-scaffold na na JAAOMG010000174.1 <> na Primary Assembly 47872 na pat_scaffold_1067_arrow_ctg1 unplaced-scaffold na na JAAOMG010000175.1 <> na Primary Assembly 47873 na pat_scaffold_1068_arrow_ctg1 unplaced-scaffold na na JAAOMG010000176.1 <> na Primary Assembly 47838 na pat_scaffold_1069_arrow_ctg1 unplaced-scaffold na na JAAOMG010000177.1 <> na Primary Assembly 47794 na pat_scaffold_1070_arrow_ctg1 unplaced-scaffold na na JAAOMG010000178.1 <> na Primary Assembly 47811 na pat_scaffold_1071_arrow_ctg1 unplaced-scaffold na na JAAOMG010000179.1 <> na Primary Assembly 47711 na pat_scaffold_1072_arrow_ctg1 unplaced-scaffold na na JAAOMG010000180.1 <> na Primary Assembly 47698 na pat_scaffold_1074_arrow_ctg1 unplaced-scaffold na na JAAOMG010000181.1 <> na Primary Assembly 47670 na pat_scaffold_1075_arrow_ctg1 unplaced-scaffold na na JAAOMG010000182.1 <> na Primary Assembly 47472 na pat_scaffold_1076_arrow_ctg1 unplaced-scaffold na na JAAOMG010000183.1 <> na Primary Assembly 47616 na pat_scaffold_1077_arrow_ctg1 unplaced-scaffold na na JAAOMG010000184.1 <> na Primary Assembly 47341 na pat_scaffold_1078_arrow_ctg1 unplaced-scaffold na na JAAOMG010000185.1 <> na Primary Assembly 47479 na pat_scaffold_1079_arrow_ctg1 unplaced-scaffold na na JAAOMG010000186.1 <> na Primary Assembly 47447 na pat_scaffold_1080_arrow_ctg1 unplaced-scaffold na na JAAOMG010000187.1 <> na Primary Assembly 47427 na pat_scaffold_1082_arrow_ctg1 unplaced-scaffold na na JAAOMG010000188.1 <> na Primary Assembly 47341 na pat_scaffold_1083_arrow_ctg1 unplaced-scaffold na na JAAOMG010000189.1 <> na Primary Assembly 47353 na pat_scaffold_1084_arrow_ctg1 unplaced-scaffold na na JAAOMG010000190.1 <> na Primary Assembly 47321 na pat_scaffold_1085_arrow_ctg1 unplaced-scaffold na na JAAOMG010000191.1 <> na Primary Assembly 47310 na pat_scaffold_1086_arrow_ctg1 unplaced-scaffold na na JAAOMG010000192.1 <> na Primary Assembly 47307 na pat_scaffold_1087_arrow_ctg1 unplaced-scaffold na na JAAOMG010000193.1 <> na Primary Assembly 47206 na pat_scaffold_1088_arrow_ctg1 unplaced-scaffold na na JAAOMG010000194.1 <> na Primary Assembly 47109 na pat_scaffold_1089_arrow_ctg1 unplaced-scaffold na na JAAOMG010000195.1 <> na Primary Assembly 47176 na pat_scaffold_1090_arrow_ctg1 unplaced-scaffold na na JAAOMG010000196.1 <> na Primary Assembly 46884 na pat_scaffold_1091_arrow_ctg1 unplaced-scaffold na na JAAOMG010000197.1 <> na Primary Assembly 46904 na pat_scaffold_1092_arrow_ctg1 unplaced-scaffold na na JAAOMG010000198.1 <> na Primary Assembly 46844 na pat_scaffold_1093_arrow_ctg1 unplaced-scaffold na na JAAOMG010000199.1 <> na Primary Assembly 46783 na pat_scaffold_1094_arrow_ctg1 unplaced-scaffold na na JAAOMG010000200.1 <> na Primary Assembly 46766 na pat_scaffold_1095_arrow_ctg1 unplaced-scaffold na na JAAOMG010000201.1 <> na Primary Assembly 46791 na pat_scaffold_1096_arrow_ctg1 unplaced-scaffold na na JAAOMG010000202.1 <> na Primary Assembly 46768 na pat_scaffold_1097_arrow_ctg1 unplaced-scaffold na na JAAOMG010000203.1 <> na Primary Assembly 46752 na pat_scaffold_1098_arrow_ctg1 unplaced-scaffold na na JAAOMG010000204.1 <> na Primary Assembly 46690 na pat_scaffold_1099_arrow_ctg1 unplaced-scaffold na na JAAOMG010000205.1 <> na Primary Assembly 46680 na pat_scaffold_1100_arrow_ctg1 unplaced-scaffold na na JAAOMG010000206.1 <> na Primary Assembly 46739 na pat_scaffold_1101_arrow_ctg1 unplaced-scaffold na na JAAOMG010000207.1 <> na Primary Assembly 46623 na pat_scaffold_1102_arrow_ctg1 unplaced-scaffold na na JAAOMG010000208.1 <> na Primary Assembly 46606 na pat_scaffold_1103_arrow_ctg1 unplaced-scaffold na na JAAOMG010000209.1 <> na Primary Assembly 46523 na pat_scaffold_1104_arrow_ctg1 unplaced-scaffold na na JAAOMG010000210.1 <> na Primary Assembly 46514 na pat_scaffold_1105_arrow_ctg1 unplaced-scaffold na na JAAOMG010000211.1 <> na Primary Assembly 46518 na pat_scaffold_1106_arrow_ctg1 unplaced-scaffold na na JAAOMG010000212.1 <> na Primary Assembly 46486 na pat_scaffold_1107_arrow_ctg1 unplaced-scaffold na na JAAOMG010000213.1 <> na Primary Assembly 46387 na pat_scaffold_1108_arrow_ctg1 unplaced-scaffold na na JAAOMG010000214.1 <> na Primary Assembly 46395 na pat_scaffold_1111_arrow_ctg1 unplaced-scaffold na na JAAOMG010000215.1 <> na Primary Assembly 46190 na pat_scaffold_1112_arrow_ctg1 unplaced-scaffold na na JAAOMG010000216.1 <> na Primary Assembly 46104 na pat_scaffold_1113_arrow_ctg1 unplaced-scaffold na na JAAOMG010000217.1 <> na Primary Assembly 46110 na pat_scaffold_1114_arrow_ctg1 unplaced-scaffold na na JAAOMG010000218.1 <> na Primary Assembly 46092 na 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Primary Assembly 8908 na pat_scaffold_190_arrow_ctg1 unplaced-scaffold na na JAAOMG010000838.1 <> na Primary Assembly 129075 na pat_scaffold_1910_arrow_ctg1 unplaced-scaffold na na JAAOMG010000839.1 <> na Primary Assembly 8910 na pat_scaffold_1911_arrow_ctg1 unplaced-scaffold na na JAAOMG010000840.1 <> na Primary Assembly 8880 na pat_scaffold_1913_arrow_ctg1 unplaced-scaffold na na JAAOMG010000841.1 <> na Primary Assembly 8871 na pat_scaffold_1914_arrow_ctg1 unplaced-scaffold na na JAAOMG010000842.1 <> na Primary Assembly 8852 na pat_scaffold_1916_arrow_ctg1 unplaced-scaffold na na JAAOMG010000843.1 <> na Primary Assembly 8799 na pat_scaffold_1917_arrow_ctg1 unplaced-scaffold na na JAAOMG010000844.1 <> na Primary Assembly 8776 na pat_scaffold_1918_arrow_ctg1 unplaced-scaffold na na JAAOMG010000845.1 <> na Primary Assembly 8756 na pat_scaffold_1921_arrow_ctg1 unplaced-scaffold na na JAAOMG010000846.1 <> na Primary Assembly 8538 na pat_scaffold_1922_arrow_ctg1 unplaced-scaffold na na 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Primary Assembly 6598 na pat_scaffold_195_arrow_ctg1 unplaced-scaffold na na JAAOMG010000877.1 <> na Primary Assembly 125672 na pat_scaffold_1961_arrow_ctg1 unplaced-scaffold na na JAAOMG010000878.1 <> na Primary Assembly 6015 na pat_scaffold_1962_arrow_ctg1 unplaced-scaffold na na JAAOMG010000879.1 <> na Primary Assembly 6326 na pat_scaffold_1963_arrow_ctg1 unplaced-scaffold na na JAAOMG010000880.1 <> na Primary Assembly 6318 na pat_scaffold_1966_arrow_ctg1 unplaced-scaffold na na JAAOMG010000881.1 <> na Primary Assembly 5930 na pat_scaffold_1967_arrow_ctg1 unplaced-scaffold na na JAAOMG010000882.1 <> na Primary Assembly 5998 na pat_scaffold_1968_arrow_ctg1 unplaced-scaffold na na JAAOMG010000883.1 <> na Primary Assembly 5940 na pat_scaffold_1969_arrow_ctg1 unplaced-scaffold na na JAAOMG010000884.1 <> na Primary Assembly 5915 na pat_scaffold_196_arrow_ctg1 unplaced-scaffold na na JAAOMG010000885.1 <> na Primary Assembly 126141 na pat_scaffold_1972_arrow_ctg1 unplaced-scaffold na na 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Primary Assembly 2889 na pat_scaffold_2005_arrow_ctg1 unplaced-scaffold na na JAAOMG010000916.1 <> na Primary Assembly 2821 na pat_scaffold_2008_arrow_ctg1 unplaced-scaffold na na JAAOMG010000917.1 <> na Primary Assembly 2764 na pat_scaffold_2009_arrow_ctg1 unplaced-scaffold na na JAAOMG010000918.1 <> na Primary Assembly 2760 na pat_scaffold_200_arrow_ctg1 unplaced-scaffold na na JAAOMG010000919.1 <> na Primary Assembly 121350 na pat_scaffold_2010_arrow_ctg1 unplaced-scaffold na na JAAOMG010000920.1 <> na Primary Assembly 2704 na pat_scaffold_2013_arrow_ctg1 unplaced-scaffold na na JAAOMG010000921.1 <> na Primary Assembly 2532 na pat_scaffold_2014_arrow_ctg1 unplaced-scaffold na na JAAOMG010000922.1 <> na Primary Assembly 2444 na pat_scaffold_2016_arrow_ctg1 unplaced-scaffold na na JAAOMG010000923.1 <> na Primary Assembly 2422 na pat_scaffold_2017_arrow_ctg1 unplaced-scaffold na na JAAOMG010000924.1 <> na Primary Assembly 2382 na pat_scaffold_2018_arrow_ctg1 unplaced-scaffold na na 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Primary Assembly 51478 na pat_scaffold_957_arrow_ctg1 unplaced-scaffold na na JAAOMG010001569.1 <> na Primary Assembly 51501 na pat_scaffold_958_arrow_ctg1 unplaced-scaffold na na JAAOMG010001570.1 <> na Primary Assembly 51503 na pat_scaffold_959_arrow_ctg1 unplaced-scaffold na na JAAOMG010001571.1 <> na Primary Assembly 51450 na pat_scaffold_970_arrow_ctg1 unplaced-scaffold na na JAAOMG010001572.1 <> na Primary Assembly 50897 na pat_scaffold_971_arrow_ctg1 unplaced-scaffold na na JAAOMG010001573.1 <> na Primary Assembly 50869 na pat_scaffold_972_arrow_ctg1 unplaced-scaffold na na JAAOMG010001574.1 <> na Primary Assembly 51238 na pat_scaffold_973_arrow_ctg1 unplaced-scaffold na na JAAOMG010001575.1 <> na Primary Assembly 50807 na pat_scaffold_974_arrow_ctg1 unplaced-scaffold na na JAAOMG010001576.1 <> na Primary Assembly 50703 na pat_scaffold_975_arrow_ctg1 unplaced-scaffold na na JAAOMG010001577.1 <> na Primary Assembly 50768 na pat_scaffold_977_arrow_ctg1 unplaced-scaffold na na JAAOMG010001578.1 <> na Primary Assembly 50727 na pat_scaffold_978_arrow_ctg1 unplaced-scaffold na na JAAOMG010001579.1 <> na Primary Assembly 50696 na pat_scaffold_981_arrow_ctg1 unplaced-scaffold na na JAAOMG010001580.1 <> na Primary Assembly 50666 na pat_scaffold_982_arrow_ctg1 unplaced-scaffold na na JAAOMG010001581.1 <> na Primary Assembly 50566 na pat_scaffold_984_arrow_ctg1 unplaced-scaffold na na JAAOMG010001582.1 <> na Primary Assembly 50569 na pat_scaffold_985_arrow_ctg1 unplaced-scaffold na na JAAOMG010001583.1 <> na Primary Assembly 49412 na pat_scaffold_986_arrow_ctg1 unplaced-scaffold na na JAAOMG010001584.1 <> na Primary Assembly 50557 na pat_scaffold_988_arrow_ctg1 unplaced-scaffold na na JAAOMG010001585.1 <> na Primary Assembly 50641 na pat_scaffold_989_arrow_ctg1 unplaced-scaffold na na JAAOMG010001586.1 <> na Primary Assembly 50507 na pat_scaffold_990_arrow_ctg1 unplaced-scaffold na na JAAOMG010001587.1 <> na Primary Assembly 50525 na pat_scaffold_991_arrow_ctg1 unplaced-scaffold na na JAAOMG010001588.1 <> na Primary Assembly 50367 na pat_scaffold_993_arrow_ctg1 unplaced-scaffold na na JAAOMG010001589.1 <> na Primary Assembly 50414 na pat_scaffold_994_arrow_ctg1 unplaced-scaffold na na JAAOMG010001590.1 <> na Primary Assembly 50448 na pat_scaffold_996_arrow_ctg1 unplaced-scaffold na na JAAOMG010001591.1 <> na Primary Assembly 50408 na pat_scaffold_997_arrow_ctg1 unplaced-scaffold na na JAAOMG010001592.1 <> na Primary Assembly 50368 na pat_scaffold_998_arrow_ctg1 unplaced-scaffold na na JAAOMG010001593.1 <> na Primary Assembly 50350 na pat_scaffold_999_arrow_ctg1 unplaced-scaffold na na JAAOMG010001594.1 <> na Primary Assembly 50300 na mArvNil1_MT assembled-molecule MT Mitochondrion CM022273.1 <> na non-nuclear 16269 na