# Assembly name: fAnaAna1.pri # Organism name: Anableps anableps (largescale foureyes) # Isolate: fAnaAna1 # Sex: male # Taxid: 195821 # BioSample: SAMN12623628 # BioProject: PRJNA561985 # Submitter: Vertebrate Genomes Project # Date: 2020-10-02 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JABWDS01 # Assembly method: FALCON v. DX 2.0.0; FALCON-Unzip v. DX 1.1.0; purge_dups v. DX 19-08-10; scaff10X v. DX 2.0.3; bionano Solve v. DX 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow polishing and gap filling v. DX 7.0.1.1; Longranger Align v. DX 2.2.2.1; freebayes v. DX 19-07-11; gEVAL manual curation v. 2020-05-14; VGP assembly pipeline v. 1.6 # Expected final version: no # Genome coverage: 58.8x # Sequencing technology: PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS # RefSeq category: Representative Genome # GenBank assembly accession: GCA_014839685.1 # Linked assembly: GCA_014839705.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_014839725.1 Primary Assembly ## GCA_014839735.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM026065.1 <> na Primary Assembly 43378579 na SUPER_2 assembled-molecule 2 Chromosome CM026066.1 <> na Primary Assembly 42912949 na SUPER_3 assembled-molecule 3 Chromosome CM026067.1 <> na Primary Assembly 42230441 na SUPER_4 assembled-molecule 4 Chromosome CM026068.1 <> na Primary Assembly 41441732 na SUPER_5 assembled-molecule 5 Chromosome CM026069.1 <> na Primary Assembly 41113619 na SUPER_6 assembled-molecule 6 Chromosome CM026070.1 <> na Primary Assembly 40529099 na SUPER_7 assembled-molecule 7 Chromosome CM026071.1 <> na Primary Assembly 40293006 na SUPER_8 assembled-molecule 8 Chromosome CM026072.1 <> na Primary Assembly 40160806 na SUPER_9 assembled-molecule 9 Chromosome CM026073.1 <> na Primary Assembly 40067139 na SUPER_10 assembled-molecule 10 Chromosome CM026074.1 <> na Primary Assembly 40051364 na SUPER_11 assembled-molecule 11 Chromosome CM026075.1 <> na Primary Assembly 39321252 na SUPER_12 assembled-molecule 12 Chromosome CM026076.1 <> na Primary Assembly 38412296 na SUPER_13 assembled-molecule 13 Chromosome CM026077.1 <> na Primary Assembly 36797684 na SUPER_14 assembled-molecule 14 Chromosome CM026078.1 <> na Primary Assembly 36427757 na SUPER_15 assembled-molecule 15 Chromosome CM026079.1 <> na Primary Assembly 34777417 na SUPER_16 assembled-molecule 16 Chromosome CM026080.1 <> na Primary Assembly 34394519 na SUPER_17 assembled-molecule 17 Chromosome CM026081.1 <> na Primary Assembly 33025266 na SUPER_18 assembled-molecule 18 Chromosome CM026082.1 <> na Primary Assembly 32637494 na SUPER_19 assembled-molecule 19 Chromosome CM026083.1 <> na Primary Assembly 31990495 na SUPER_20 assembled-molecule 20 Chromosome CM026084.1 <> na Primary Assembly 31637238 na SUPER_21 assembled-molecule 21 Chromosome CM026085.1 <> na Primary Assembly 31388587 na SUPER_22 assembled-molecule 22 Chromosome CM026086.1 <> na Primary Assembly 31256408 na SUPER_23 assembled-molecule 23 Chromosome CM026087.1 <> na Primary Assembly 24729506 na SUPER_24 assembled-molecule 24 Chromosome CM026088.1 <> na Primary Assembly 18380907 na scaffold_31_arrow_ctg1 unplaced-scaffold na na JABWDS010000025.1 <> na Primary Assembly 64355 na scaffold_34_arrow_ctg1 unplaced-scaffold na na JABWDS010000026.1 <> na Primary Assembly 49563 na scaffold_35_arrow_ctg1 unplaced-scaffold na na JABWDS010000027.1 <> na Primary Assembly 42287 na scaffold_36_arrow_ctg1 unplaced-scaffold na na JABWDS010000028.1 <> na Primary Assembly 38925 na scaffold_37_arrow_ctg1 unplaced-scaffold na na JABWDS010000029.1 <> na Primary Assembly 14639 na scaffold_38_arrow_ctg1 unplaced-scaffold na na JABWDS010000030.1 <> na Primary Assembly 26637 na scaffold_39_arrow_ctg1 unplaced-scaffold na na JABWDS010000031.1 <> na Primary Assembly 22716 na scaffold_41_arrow_ctg1 unplaced-scaffold na na JABWDS010000032.1 <> na Primary Assembly 1800 na fAnaAna1_MT assembled-molecule MT Mitochondrion CM026089.1 <> na non-nuclear 16511 na