# Assembly name:  sCarCar2.alt
# Organism name:  Carcharodon carcharias (great white shark)
# Isolate:  sCarCar2
# Sex:  male
# Taxid:          13397
# BioSample:      SAMN12629504
# BioProject:     PRJNA562008
# Submitter:      Vertebrate Genomes Project
# Date:           2021-03-30
# Assembly type:  alternate-pseudohaplotype
# Release type:   major
# Assembly level: Scaffold
# Genome representation: full
# WGS project:    JAGDEF01
# Assembly method: FALCON v. DX 2.0.1; FALCON-Unzip v. DX 1.2.1; purge_dups v. DX 19-08-10; scaff10X v. DX 2.0.3; bionano Solve v. DX 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow polishing and gap filling v. DX 7.0.1.1; Longranger Align v. DX 2.2.2.1; freebayes v. DX 19-07-11; gEVAL manual curation v. 2021-02-05; VGP assembly pipeline v. 1.6
# Expected final version: no
# Genome coverage: 66.84x
# Sequencing technology: PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS
# Excluded from RefSeq: genome length too small
# GenBank assembly accession: GCA_017639455.1
# Linked assembly: GCA_017639515.1 (principal pseudohaplotype of diploid)
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_017639465.1		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
H_1	unplaced-scaffold	na	na	JAGDEF010000001.1	<>	na	Primary Assembly	20368	na
H_10	unplaced-scaffold	na	na	JAGDEF010000010.1	<>	na	Primary Assembly	50931	na
H_11	unplaced-scaffold	na	na	JAGDEF010000011.1	<>	na	Primary Assembly	39834	na
H_12	unplaced-scaffold	na	na	JAGDEF010000012.1	<>	na	Primary Assembly	37282	na
H_13	unplaced-scaffold	na	na	JAGDEF010000013.1	<>	na	Primary Assembly	36898	na
H_14	unplaced-scaffold	na	na	JAGDEF010000014.1	<>	na	Primary Assembly	10467	na
H_15	unplaced-scaffold	na	na	JAGDEF010000015.1	<>	na	Primary Assembly	35862	na
H_16	unplaced-scaffold	na	na	JAGDEF010000016.1	<>	na	Primary Assembly	41040	na
H_17	unplaced-scaffold	na	na	JAGDEF010000017.1	<>	na	Primary Assembly	61014	na
H_18	unplaced-scaffold	na	na	JAGDEF010000018.1	<>	na	Primary Assembly	34873	na
H_19	unplaced-scaffold	na	na	JAGDEF010000019.1	<>	na	Primary Assembly	27600	na
H_2	unplaced-scaffold	na	na	JAGDEF010000002.1	<>	na	Primary Assembly	56401	na
H_20	unplaced-scaffold	na	na	JAGDEF010000020.1	<>	na	Primary Assembly	4330	na
H_21	unplaced-scaffold	na	na	JAGDEF010000021.1	<>	na	Primary Assembly	57691	na
H_22	unplaced-scaffold	na	na	JAGDEF010000022.1	<>	na	Primary Assembly	28187	na
H_23	unplaced-scaffold	na	na	JAGDEF010000023.1	<>	na	Primary Assembly	80339	na
H_24	unplaced-scaffold	na	na	JAGDEF010000024.1	<>	na	Primary Assembly	23456	na
H_25	unplaced-scaffold	na	na	JAGDEF010000025.1	<>	na	Primary Assembly	2566293	na
H_26	unplaced-scaffold	na	na	JAGDEF010000026.1	<>	na	Primary Assembly	34732	na
H_27	unplaced-scaffold	na	na	JAGDEF010000027.1	<>	na	Primary Assembly	591130	na
H_28	unplaced-scaffold	na	na	JAGDEF010000028.1	<>	na	Primary Assembly	1525	na
H_29	unplaced-scaffold	na	na	JAGDEF010000029.1	<>	na	Primary Assembly	838957	na
H_3	unplaced-scaffold	na	na	JAGDEF010000003.1	<>	na	Primary Assembly	206544	na
H_30	unplaced-scaffold	na	na	JAGDEF010000030.1	<>	na	Primary Assembly	58480	na
H_31	unplaced-scaffold	na	na	JAGDEF010000031.1	<>	na	Primary Assembly	22683	na
H_32	unplaced-scaffold	na	na	JAGDEF010000032.1	<>	na	Primary Assembly	331247	na
H_33	unplaced-scaffold	na	na	JAGDEF010000033.1	<>	na	Primary Assembly	140726	na
H_34	unplaced-scaffold	na	na	JAGDEF010000034.1	<>	na	Primary Assembly	106564	na
H_35	unplaced-scaffold	na	na	JAGDEF010000035.1	<>	na	Primary Assembly	67942	na
H_36	unplaced-scaffold	na	na	JAGDEF010000036.1	<>	na	Primary Assembly	32483	na
H_37	unplaced-scaffold	na	na	JAGDEF010000037.1	<>	na	Primary Assembly	55306	na
H_38	unplaced-scaffold	na	na	JAGDEF010000038.1	<>	na	Primary Assembly	103297	na
H_39	unplaced-scaffold	na	na	JAGDEF010000039.1	<>	na	Primary Assembly	76686	na
H_4	unplaced-scaffold	na	na	JAGDEF010000004.1	<>	na	Primary Assembly	38395	na
H_5	unplaced-scaffold	na	na	JAGDEF010000005.1	<>	na	Primary Assembly	85064	na
H_6	unplaced-scaffold	na	na	JAGDEF010000006.1	<>	na	Primary Assembly	77287	na
H_7	unplaced-scaffold	na	na	JAGDEF010000007.1	<>	na	Primary Assembly	28336	na
H_8	unplaced-scaffold	na	na	JAGDEF010000008.1	<>	na	Primary Assembly	56134	na
H_9	unplaced-scaffold	na	na	JAGDEF010000009.1	<>	na	Primary Assembly	38621	na