# Assembly name: PDT000993243.1 # Description: NCBI Pathogen Detection Assembly PDT000993243.1 # Organism name: Escherichia coli (E. coli) # Infraspecific name: strain=Escherichia coli K12 J53 # Taxid: 562 # BioSample: SAMEA5747433 # BioProject: PRJNA514245 # Submitter: National Center for Biotechnology Information # Date: 2021-04-02 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: DADPLK01 # Assembly method: SKESA v. 2.2 # Expected final version: no # Genome coverage: 77x # Sequencing technology: ILLUMINA # Excluded from RefSeq: from large multi-isolate project # GenBank assembly accession: GCA_017680285.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017680295.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SAMEA5747433-rid11828383.denovo.01 unplaced-scaffold na na DADPLK010000001.1 <> na Primary Assembly 270476 na SAMEA5747433-rid11828383.denovo.02 unplaced-scaffold na na DADPLK010000002.1 <> na Primary Assembly 265472 na SAMEA5747433-rid11828383.denovo.03 unplaced-scaffold na na DADPLK010000003.1 <> na Primary Assembly 258518 na SAMEA5747433-rid11828383.denovo.04 unplaced-scaffold na na DADPLK010000004.1 <> na Primary Assembly 202972 na SAMEA5747433-rid11828383.denovo.05 unplaced-scaffold na na DADPLK010000005.1 <> na Primary Assembly 185219 na SAMEA5747433-rid11828383.denovo.06 unplaced-scaffold na na DADPLK010000006.1 <> na Primary Assembly 178121 na SAMEA5747433-rid11828383.denovo.07 unplaced-scaffold na na DADPLK010000007.1 <> na Primary Assembly 171891 na SAMEA5747433-rid11828383.denovo.08 unplaced-scaffold na na DADPLK010000008.1 <> na Primary Assembly 165783 na SAMEA5747433-rid11828383.denovo.09 unplaced-scaffold na na DADPLK010000009.1 <> na Primary Assembly 160574 na SAMEA5747433-rid11828383.denovo.10 unplaced-scaffold na na DADPLK010000010.1 <> na Primary Assembly 148352 na SAMEA5747433-rid11828383.denovo.11 unplaced-scaffold na na DADPLK010000011.1 <> na Primary Assembly 139942 na SAMEA5747433-rid11828383.denovo.12 unplaced-scaffold na na DADPLK010000012.1 <> na Primary Assembly 132899 na SAMEA5747433-rid11828383.denovo.13 unplaced-scaffold na na DADPLK010000013.1 <> na Primary Assembly 132444 na SAMEA5747433-rid11828383.denovo.14 unplaced-scaffold na na DADPLK010000014.1 <> na Primary Assembly 112693 na SAMEA5747433-rid11828383.denovo.15 unplaced-scaffold na na DADPLK010000015.1 <> na Primary Assembly 112592 na SAMEA5747433-rid11828383.denovo.16 unplaced-scaffold na na DADPLK010000016.1 <> na Primary Assembly 112372 na SAMEA5747433-rid11828383.denovo.17 unplaced-scaffold na na DADPLK010000017.1 <> na Primary Assembly 111860 na SAMEA5747433-rid11828383.denovo.18 unplaced-scaffold na na DADPLK010000018.1 <> na Primary Assembly 97388 na SAMEA5747433-rid11828383.denovo.19 unplaced-scaffold na na DADPLK010000019.1 <> na Primary Assembly 95380 na SAMEA5747433-rid11828383.denovo.20 unplaced-scaffold na na DADPLK010000020.1 <> na Primary Assembly 88549 na SAMEA5747433-rid11828383.denovo.21 unplaced-scaffold na na DADPLK010000021.1 <> na Primary Assembly 86665 na SAMEA5747433-rid11828383.denovo.22 unplaced-scaffold na na DADPLK010000022.1 <> na Primary Assembly 83075 na SAMEA5747433-rid11828383.denovo.23 unplaced-scaffold na na DADPLK010000023.1 <> na Primary Assembly 78493 na SAMEA5747433-rid11828383.denovo.24 unplaced-scaffold na na DADPLK010000024.1 <> na Primary Assembly 68664 na SAMEA5747433-rid11828383.denovo.25 unplaced-scaffold na na DADPLK010000025.1 <> na Primary Assembly 67218 na SAMEA5747433-rid11828383.denovo.26 unplaced-scaffold na na DADPLK010000026.1 <> na Primary Assembly 63504 na SAMEA5747433-rid11828383.denovo.27 unplaced-scaffold na na DADPLK010000027.1 <> na Primary Assembly 61935 na SAMEA5747433-rid11828383.denovo.28 unplaced-scaffold na na DADPLK010000028.1 <> na Primary Assembly 57808 na SAMEA5747433-rid11828383.denovo.29 unplaced-scaffold na na DADPLK010000029.1 <> na Primary Assembly 56904 na SAMEA5747433-rid11828383.denovo.30 unplaced-scaffold na na DADPLK010000030.1 <> na Primary Assembly 49781 na SAMEA5747433-rid11828383.denovo.31 unplaced-scaffold na na DADPLK010000031.1 <> na Primary Assembly 49774 na SAMEA5747433-rid11828383.denovo.32 unplaced-scaffold na na DADPLK010000032.1 <> na Primary Assembly 43834 na SAMEA5747433-rid11828383.denovo.33 unplaced-scaffold na na DADPLK010000033.1 <> na Primary Assembly 43476 na SAMEA5747433-rid11828383.denovo.34 unplaced-scaffold na na DADPLK010000034.1 <> na Primary Assembly 42382 na SAMEA5747433-rid11828383.denovo.35 unplaced-scaffold na na DADPLK010000035.1 <> na Primary Assembly 41253 na SAMEA5747433-rid11828383.denovo.36 unplaced-scaffold na na DADPLK010000036.1 <> na Primary Assembly 40773 na SAMEA5747433-rid11828383.denovo.37 unplaced-scaffold na na DADPLK010000037.1 <> na Primary Assembly 40048 na SAMEA5747433-rid11828383.denovo.38 unplaced-scaffold na na DADPLK010000038.1 <> na Primary Assembly 35074 na SAMEA5747433-rid11828383.denovo.39 unplaced-scaffold na na DADPLK010000039.1 <> na Primary Assembly 32473 na SAMEA5747433-rid11828383.denovo.40 unplaced-scaffold na na DADPLK010000040.1 <> na Primary Assembly 32103 na SAMEA5747433-rid11828383.denovo.41 unplaced-scaffold na na DADPLK010000041.1 <> na Primary Assembly 31466 na SAMEA5747433-rid11828383.denovo.42 unplaced-scaffold na na DADPLK010000042.1 <> na Primary Assembly 30880 na SAMEA5747433-rid11828383.denovo.43 unplaced-scaffold na na DADPLK010000043.1 <> na Primary Assembly 29846 na SAMEA5747433-rid11828383.denovo.44 unplaced-scaffold na na DADPLK010000044.1 <> na Primary Assembly 29730 na SAMEA5747433-rid11828383.denovo.45 unplaced-scaffold na na DADPLK010000045.1 <> na Primary Assembly 28998 na SAMEA5747433-rid11828383.denovo.46 unplaced-scaffold na na DADPLK010000046.1 <> na Primary Assembly 27703 na SAMEA5747433-rid11828383.denovo.47 unplaced-scaffold na na DADPLK010000047.1 <> na Primary Assembly 22858 na SAMEA5747433-rid11828383.denovo.49 unplaced-scaffold na na DADPLK010000048.1 <> na Primary Assembly 18318 na SAMEA5747433-rid11828383.denovo.50 unplaced-scaffold na na DADPLK010000049.1 <> na Primary Assembly 17758 na SAMEA5747433-rid11828383.denovo.51 unplaced-scaffold na na DADPLK010000050.1 <> na Primary Assembly 15486 na SAMEA5747433-rid11828383.denovo.52 unplaced-scaffold na na DADPLK010000051.1 <> na Primary Assembly 14891 na SAMEA5747433-rid11828383.denovo.53 unplaced-scaffold na na DADPLK010000052.1 <> na Primary Assembly 14284 na SAMEA5747433-rid11828383.denovo.55 unplaced-scaffold na na DADPLK010000053.1 <> na Primary Assembly 13948 na SAMEA5747433-rid11828383.denovo.56 unplaced-scaffold na na DADPLK010000054.1 <> na Primary Assembly 13623 na SAMEA5747433-rid11828383.denovo.57 unplaced-scaffold na na DADPLK010000055.1 <> na Primary Assembly 10680 na SAMEA5747433-rid11828383.denovo.58 unplaced-scaffold na na DADPLK010000056.1 <> na Primary Assembly 9113 na SAMEA5747433-rid11828383.denovo.59 unplaced-scaffold na na DADPLK010000057.1 <> na Primary Assembly 6548 na SAMEA5747433-rid11828383.denovo.60 unplaced-scaffold na na DADPLK010000058.1 <> na Primary Assembly 6327 na SAMEA5747433-rid11828383.denovo.61 unplaced-scaffold na na DADPLK010000059.1 <> na Primary Assembly 5469 na SAMEA5747433-rid11828383.denovo.62 unplaced-scaffold na na DADPLK010000060.1 <> na Primary Assembly 4897 na SAMEA5747433-rid11828383.denovo.63 unplaced-scaffold na na DADPLK010000061.1 <> na Primary Assembly 4891 na SAMEA5747433-rid11828383.denovo.65 unplaced-scaffold na na DADPLK010000062.1 <> na Primary Assembly 4067 na SAMEA5747433-rid11828383.denovo.66 unplaced-scaffold na na DADPLK010000063.1 <> na Primary Assembly 4011 na SAMEA5747433-rid11828383.denovo.67 unplaced-scaffold na na DADPLK010000064.1 <> na Primary Assembly 3061 na SAMEA5747433-rid11828383.denovo.68 unplaced-scaffold na na DADPLK010000065.1 <> na Primary Assembly 2474 na SAMEA5747433-rid11828383.denovo.69 unplaced-scaffold na na DADPLK010000066.1 <> na Primary Assembly 2473 na SAMEA5747433-rid11828383.denovo.70 unplaced-scaffold na na DADPLK010000067.1 <> na Primary Assembly 1791 na SAMEA5747433-rid11828383.denovo.71 unplaced-scaffold na na DADPLK010000068.1 <> na Primary Assembly 1638 na SAMEA5747433-rid11828383.denovo.72 unplaced-scaffold na na DADPLK010000069.1 <> na Primary Assembly 1545 na SAMEA5747433-rid11828383.denovo.73 unplaced-scaffold na na DADPLK010000070.1 <> na Primary Assembly 1513 na SAMEA5747433-rid11828383.denovo.74 unplaced-scaffold na na DADPLK010000071.1 <> na Primary Assembly 1291 na SAMEA5747433-rid11828383.denovo.75 unplaced-scaffold na na DADPLK010000072.1 <> na Primary Assembly 1213 na SAMEA5747433-rid11828383.denovo.76 unplaced-scaffold na na DADPLK010000073.1 <> na Primary Assembly 1156 na SAMEA5747433-rid11828383.denovo.77 unplaced-scaffold na na DADPLK010000074.1 <> na Primary Assembly 1051 na SAMEA5747433-rid11828383.denovo.78 unplaced-scaffold na na DADPLK010000075.1 <> na Primary Assembly 1018 na SAMEA5747433-rid11828383.denovo.79 unplaced-scaffold na na DADPLK010000076.1 <> na Primary Assembly 920 na SAMEA5747433-rid11828383.denovo.80 unplaced-scaffold na na DADPLK010000077.1 <> na Primary Assembly 806 na SAMEA5747433-rid11828383.denovo.81 unplaced-scaffold na na DADPLK010000078.1 <> na Primary Assembly 806 na SAMEA5747433-rid11828383.denovo.82 unplaced-scaffold na na DADPLK010000079.1 <> na Primary Assembly 771 na SAMEA5747433-rid11828383.denovo.83 unplaced-scaffold na na DADPLK010000080.1 <> na Primary Assembly 686 na SAMEA5747433-rid11828383.denovo.84 unplaced-scaffold na na DADPLK010000081.1 <> na Primary Assembly 664 na SAMEA5747433-rid11828383.denovo.85 unplaced-scaffold na na DADPLK010000082.1 <> na Primary Assembly 603 na SAMEA5747433-rid11828383.denovo.86 unplaced-scaffold na na DADPLK010000083.1 <> na Primary Assembly 550 na SAMEA5747433-rid11828383.denovo.87 unplaced-scaffold na na DADPLK010000084.1 <> na Primary Assembly 540 na SAMEA5747433-rid11828383.denovo.88 unplaced-scaffold na na DADPLK010000085.1 <> na Primary Assembly 527 na SAMEA5747433-rid11828383.guided.48 unplaced-scaffold na na DADPLK010000086.1 <> na Primary Assembly 19140 na SAMEA5747433-rid11828383.guided.54 unplaced-scaffold na na DADPLK010000087.1 <> na Primary Assembly 14067 na SAMEA5747433-rid11828383.guided.64 unplaced-scaffold na na DADPLK010000088.1 <> na Primary Assembly 4377 na