# Assembly name: LU_Lgha_1.0 # Organism name: Leishmania sp. Ghana 2012 LV757 (kinetoplastids) # Infraspecific name: strain=GH5 # Taxid: 2803181 # BioSample: SAMN17294115 # BioProject: PRJNA691536 # Submitter: Lancaster University # Date: 2021-04-15 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAFJZN01 # Assembly method: Flye assembler v. 2.6; Samtools v. 1.9 # Expected final version: yes # Genome coverage: 371.2x # Sequencing technology: Oxford Nanopore MinION; Illumina HiSeq; Illumina MiSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_017918215.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017918325.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name GH005_Chr_01 assembled-molecule 1 Chromosome CM030468.1 <> na Primary Assembly 295535 na GH005_Chr_02 assembled-molecule 2 Chromosome CM030469.1 <> na Primary Assembly 428085 na GH005_Chr_03 assembled-molecule 3 Chromosome CM030470.1 <> na Primary Assembly 480396 na GH005_Chr_04 assembled-molecule 4 Chromosome CM030471.1 <> na Primary Assembly 474188 na GH005_Chr_05 assembled-molecule 5 Chromosome CM030472.1 <> na Primary Assembly 541289 na GH005_Chr_06 assembled-molecule 6 Chromosome CM030473.1 <> na Primary Assembly 571411 na GH005_Chr_07 assembled-molecule 7 Chromosome CM030474.1 <> na Primary Assembly 661752 na GH005_Chr_08 assembled-molecule 8 Chromosome CM030475.1 <> na Primary Assembly 575826 na GH005_Chr_09 assembled-molecule 9 Chromosome CM030476.1 <> na Primary Assembly 672236 na GH005_Chr_10 assembled-molecule 10 Chromosome CM030477.1 <> na Primary Assembly 961565 na GH005_Chr_11 assembled-molecule 11 Chromosome CM030478.1 <> na Primary Assembly 657061 na GH005_Chr_12 assembled-molecule 12 Chromosome CM030479.1 <> na Primary Assembly 514272 na GH005_Chr_13 assembled-molecule 13 Chromosome CM030480.1 <> na Primary Assembly 626413 na GH005_Chr_14 assembled-molecule 14 Chromosome CM030481.1 <> na Primary Assembly 665708 na GH005_Chr_15 assembled-molecule 15 Chromosome CM030482.1 <> na Primary Assembly 730749 na GH005_Chr_16 assembled-molecule 16 Chromosome CM030483.1 <> na Primary Assembly 725574 na GH005_Chr_17 assembled-molecule 17 Chromosome CM030484.1 <> na Primary Assembly 740042 na GH005_Chr_18 assembled-molecule 18 Chromosome CM030485.1 <> na Primary Assembly 765724 na GH005_Chr_19 assembled-molecule 19 Chromosome CM030486.1 <> na Primary Assembly 690643 na GH005_Chr_20 assembled-molecule 20 Chromosome CM030487.1 <> na Primary Assembly 781233 na GH005_Chr_21 assembled-molecule 21 Chromosome CM030488.1 <> na Primary Assembly 825645 na GH005_Chr_22 assembled-molecule 22 Chromosome CM030489.1 <> na Primary Assembly 781507 na GH005_Chr_23 assembled-molecule 23 Chromosome CM030490.1 <> na Primary Assembly 839638 na GH005_Chr_24 assembled-molecule 24 Chromosome CM030491.1 <> na Primary Assembly 867124 na GH005_Chr_25 assembled-molecule 25 Chromosome CM030492.1 <> na Primary Assembly 1010186 na GH005_Chr_26 assembled-molecule 26 Chromosome CM030493.1 <> na Primary Assembly 1257725 na GH005_Chr_27 assembled-molecule 27 Chromosome CM030494.1 <> na Primary Assembly 1100365 na GH005_Chr_28 assembled-molecule 28 Chromosome CM030495.1 <> na Primary Assembly 1280601 na GH005_Chr_29 assembled-molecule 29 Chromosome CM030496.1 <> na Primary Assembly 1201201 na GH005_Chr_30 assembled-molecule 30 Chromosome CM030497.1 <> na Primary Assembly 1398432 na GH005_Chr_31 assembled-molecule 31 Chromosome CM030498.1 <> na Primary Assembly 1686418 na GH005_Chr_32 assembled-molecule 32 Chromosome CM030499.1 <> na Primary Assembly 1589757 na GH005_Chr_33 assembled-molecule 33 Chromosome CM030500.1 <> na Primary Assembly 1693205 na GH005_Chr_34 assembled-molecule 34 Chromosome CM030501.1 <> na Primary Assembly 1857293 na GH005_Chr_35 assembled-molecule 35 Chromosome CM030502.1 <> na Primary Assembly 2172344 na GH005_Chr_36 assembled-molecule 36 Chromosome CM030503.1 <> na Primary Assembly 2754858 na contig_101 unplaced-scaffold na na JAFJZN010000037.1 <> na Primary Assembly 5043 na contig_109 unplaced-scaffold na na JAFJZN010000038.1 <> na Primary Assembly 1795 na contig_121 unplaced-scaffold na na JAFJZN010000039.1 <> na Primary Assembly 743 na contig_129 unplaced-scaffold na na JAFJZN010000040.1 <> na Primary Assembly 33133 na contig_130 unplaced-scaffold na na JAFJZN010000041.1 <> na Primary Assembly 21844 na contig_133 unplaced-scaffold na na JAFJZN010000042.1 <> na Primary Assembly 6988 na contig_135 unplaced-scaffold na na JAFJZN010000043.1 <> na Primary Assembly 1593 na contig_136 unplaced-scaffold na na JAFJZN010000044.1 <> na Primary Assembly 22151 na contig_138 unplaced-scaffold na na JAFJZN010000045.1 <> na Primary Assembly 821 na contig_145 unplaced-scaffold na na JAFJZN010000046.1 <> na Primary Assembly 7794 na contig_147 unplaced-scaffold na na JAFJZN010000047.1 <> na Primary Assembly 1425 na contig_148 unplaced-scaffold na na JAFJZN010000048.1 <> na Primary Assembly 17978 na contig_149 unplaced-scaffold na na JAFJZN010000049.1 <> na Primary Assembly 10663 na contig_151 unplaced-scaffold na na JAFJZN010000050.1 <> na Primary Assembly 43913 na contig_156 unplaced-scaffold na na JAFJZN010000051.1 <> na Primary Assembly 85350 na contig_160 unplaced-scaffold na na JAFJZN010000052.1 <> na Primary Assembly 25518 na contig_163 unplaced-scaffold na na JAFJZN010000053.1 <> na Primary Assembly 104241 na contig_166 unplaced-scaffold na na JAFJZN010000054.1 <> na Primary Assembly 18841 na contig_176 unplaced-scaffold na na JAFJZN010000055.1 <> na Primary Assembly 42532 na contig_179 unplaced-scaffold na na JAFJZN010000056.1 <> na Primary Assembly 569 na contig_180 unplaced-scaffold na na JAFJZN010000057.1 <> na Primary Assembly 24783 na contig_188 unplaced-scaffold na na JAFJZN010000058.1 <> na Primary Assembly 3655 na contig_193 unplaced-scaffold na na JAFJZN010000059.1 <> na Primary Assembly 2923 na contig_194 unplaced-scaffold na na JAFJZN010000060.1 <> na Primary Assembly 19059 na contig_195 unplaced-scaffold na na JAFJZN010000061.1 <> na Primary Assembly 1254 na contig_211 unplaced-scaffold na na JAFJZN010000062.1 <> na Primary Assembly 3555 na contig_213 unplaced-scaffold na na JAFJZN010000063.1 <> na Primary Assembly 573 na contig_217 unplaced-scaffold na na JAFJZN010000064.1 <> na Primary Assembly 1167 na contig_218 unplaced-scaffold na na JAFJZN010000065.1 <> na Primary Assembly 12038 na contig_219 unplaced-scaffold na na JAFJZN010000066.1 <> na Primary Assembly 757 na contig_220 unplaced-scaffold na na JAFJZN010000067.1 <> na Primary Assembly 4582 na contig_236 unplaced-scaffold na na JAFJZN010000068.1 <> na Primary Assembly 8823 na contig_246 unplaced-scaffold na na JAFJZN010000069.1 <> na Primary Assembly 45593 na contig_247 unplaced-scaffold na na JAFJZN010000070.1 <> na Primary Assembly 55459 na contig_261 unplaced-scaffold na na JAFJZN010000071.1 <> na Primary Assembly 20864 na contig_270 unplaced-scaffold na na JAFJZN010000072.1 <> na Primary Assembly 4416 na contig_276 unplaced-scaffold na na JAFJZN010000073.1 <> na Primary Assembly 2579 na contig_277 unplaced-scaffold na na JAFJZN010000074.1 <> na Primary Assembly 2951 na contig_292 unplaced-scaffold na na JAFJZN010000075.1 <> na Primary Assembly 33471 na contig_294 unplaced-scaffold na na JAFJZN010000076.1 <> na Primary Assembly 4117 na contig_310 unplaced-scaffold na na JAFJZN010000077.1 <> na Primary Assembly 1251 na contig_318 unplaced-scaffold na na JAFJZN010000078.1 <> na Primary Assembly 2529 na contig_319 unplaced-scaffold na na JAFJZN010000079.1 <> na Primary Assembly 662 na contig_325 unplaced-scaffold na na JAFJZN010000080.1 <> na Primary Assembly 6611 na contig_327 unplaced-scaffold na na JAFJZN010000081.1 <> na Primary Assembly 4471 na contig_351 unplaced-scaffold na na JAFJZN010000082.1 <> na Primary Assembly 36420 na contig_366 unplaced-scaffold na na JAFJZN010000083.1 <> na Primary Assembly 884 na contig_381 unplaced-scaffold na na JAFJZN010000084.1 <> na Primary Assembly 34229 na contig_383 unplaced-scaffold na na JAFJZN010000085.1 <> na Primary Assembly 9340 na contig_385 unplaced-scaffold na na JAFJZN010000086.1 <> na Primary Assembly 10139 na contig_386 unplaced-scaffold na na JAFJZN010000087.1 <> na Primary Assembly 19459 na contig_39 unplaced-scaffold na na JAFJZN010000088.1 <> na Primary Assembly 3684 na contig_390 unplaced-scaffold na na JAFJZN010000089.1 <> na Primary Assembly 2570 na contig_394 unplaced-scaffold na na JAFJZN010000090.1 <> na Primary Assembly 54599 na contig_401 unplaced-scaffold na na JAFJZN010000091.1 <> na Primary Assembly 3191 na contig_408 unplaced-scaffold na na JAFJZN010000092.1 <> na Primary Assembly 612 na contig_412 unplaced-scaffold na na JAFJZN010000093.1 <> na Primary Assembly 961 na contig_413 unplaced-scaffold na na JAFJZN010000094.1 <> na Primary Assembly 558 na contig_415 unplaced-scaffold na na JAFJZN010000095.1 <> na Primary Assembly 4030 na contig_436 unplaced-scaffold na na JAFJZN010000096.1 <> na Primary Assembly 5518 na contig_441 unplaced-scaffold na na JAFJZN010000097.1 <> na Primary Assembly 2218 na contig_459 unplaced-scaffold na na JAFJZN010000098.1 <> na Primary Assembly 6057 na contig_46 unplaced-scaffold na na JAFJZN010000099.1 <> na Primary Assembly 1030 na contig_463 unplaced-scaffold na na JAFJZN010000100.1 <> na Primary Assembly 3323 na contig_469 unplaced-scaffold na na JAFJZN010000101.1 <> na Primary Assembly 1680 na contig_471 unplaced-scaffold na na JAFJZN010000102.1 <> na Primary Assembly 3663 na contig_473 unplaced-scaffold na na JAFJZN010000103.1 <> na Primary Assembly 3373 na contig_479 unplaced-scaffold na na JAFJZN010000104.1 <> na Primary Assembly 3829 na contig_486 unplaced-scaffold na na JAFJZN010000105.1 <> na Primary Assembly 13674 na contig_493 unplaced-scaffold na na JAFJZN010000106.1 <> na Primary Assembly 5245 na contig_504 unplaced-scaffold na na JAFJZN010000107.1 <> na Primary Assembly 4074 na contig_509 unplaced-scaffold na na JAFJZN010000108.1 <> na Primary Assembly 5841 na contig_52 unplaced-scaffold na na JAFJZN010000109.1 <> na Primary Assembly 3726 na contig_520 unplaced-scaffold na na JAFJZN010000110.1 <> na Primary Assembly 25000 na contig_61 unplaced-scaffold na na JAFJZN010000111.1 <> na Primary Assembly 25952 na contig_71 unplaced-scaffold na na JAFJZN010000112.1 <> na Primary Assembly 28913 na contig_92 unplaced-scaffold na na JAFJZN010000113.1 <> na Primary Assembly 1081 na contig_93 unplaced-scaffold na na JAFJZN010000114.1 <> na Primary Assembly 27913 na contig_95 unplaced-scaffold na na JAFJZN010000115.1 <> na Primary Assembly 2866 na contig_98 unplaced-scaffold na na JAFJZN010000116.1 <> na Primary Assembly 807 na