# Assembly name: HG01258_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01258 # Sex: male # Taxid: 9606 # BioSample: SAMN17861233 # BioProject: PRJNA725606 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAGYYU02 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 59x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018469405.2 # Linked assembly: GCA_018469675.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018469455.2 Primary Assembly ## GCA_018469545.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01258#2#h2tg000009l assembled-molecule 2 Chromosome CM088139.1 <> na Primary Assembly 242404979 na HG01258#2#h2tg000015l assembled-molecule 4 Chromosome CM088140.1 <> na Primary Assembly 190462764 na HG01258#2#h2tg000001l assembled-molecule 5 Chromosome CM088141.1 <> na Primary Assembly 184159654 na HG01258#2#h2tg000005l assembled-molecule 7 Chromosome CM088142.1 <> na Primary Assembly 159690612 na HG01258#2#h2tg000010l assembled-molecule 8 Chromosome CM088143.1 <> na Primary Assembly 145683356 na HG01258#2#h2tg000023l assembled-molecule 9 Chromosome CM088144.1 <> na Primary Assembly 134108241 na HG01258#2#h2tg000006l assembled-molecule 11 Chromosome CM088145.1 <> na Primary Assembly 134999035 na HG01258#2#h2tg000008l assembled-molecule 12 Chromosome CM088146.1 <> na Primary Assembly 133185412 na HG01258#2#h2tg000018l assembled-molecule 16 Chromosome CM088147.1 <> na Primary Assembly 87941208 na HG01258#2#h2tg000007l assembled-molecule 18 Chromosome CM088148.1 <> na Primary Assembly 81799870 na HG01258#2#h2tg000029l assembled-molecule 19 Chromosome CM088149.1 <> na Primary Assembly 62059894 na HG01258#2#h2tg000013l assembled-molecule 20 Chromosome CM088150.1 <> na Primary Assembly 66351214 na HG01258#2#h2tg000002l unplaced-scaffold na na JAGYYU020000002.1 <> na Primary Assembly 134697709 na HG01258#2#h2tg000014l unplaced-scaffold na na JAGYYU020000008.1 <> na Primary Assembly 107395182 na HG01258#2#h2tg000016l unplaced-scaffold na na JAGYYU020000010.1 <> na Primary Assembly 172423991 na HG01258#2#h2tg000017l unplaced-scaffold na na JAGYYU020000011.1 <> na Primary Assembly 52172827 na HG01258#2#h2tg000021l unplaced-scaffold na na JAGYYU020000013.1 <> na Primary Assembly 40189533 na HG01258#2#h2tg000022l unplaced-scaffold na na JAGYYU020000014.1 <> na Primary Assembly 55406150 na HG01258#2#h2tg000025l unplaced-scaffold na na JAGYYU020000015.1 <> na Primary Assembly 119353117 na HG01258#2#h2tg000026l unplaced-scaffold na na JAGYYU020000016.1 <> na Primary Assembly 102238991 na HG01258#2#h2tg000028l unplaced-scaffold na na JAGYYU020000017.1 <> na Primary Assembly 94134598 na HG01258#2#h2tg000031l unplaced-scaffold na na JAGYYU020000019.1 <> na Primary Assembly 3645274 na HG01258#2#h2tg000032l unplaced-scaffold na na JAGYYU020000020.1 <> na Primary Assembly 5507021 na HG01258#2#h2tg000033l unplaced-scaffold na na JAGYYU020000021.1 <> na Primary Assembly 1228351 na HG01258#2#h2tg000034l unplaced-scaffold na na JAGYYU020000022.1 <> na Primary Assembly 1748978 na HG01258#2#h2tg000037l unplaced-scaffold na na JAGYYU020000023.1 <> na Primary Assembly 4183376 na HG01258#2#h2tg000041l unplaced-scaffold na na JAGYYU020000024.1 <> na Primary Assembly 473389 na HG01258#2#h2tg000047l unplaced-scaffold na na JAGYYU020000025.1 <> na Primary Assembly 100956 na HG01258#2#h2tg000050l unplaced-scaffold na na JAGYYU020000026.1 <> na Primary Assembly 402545 na HG01258#2#h2tg000055l unplaced-scaffold na na JAGYYU020000027.1 <> na Primary Assembly 564534 na HG01258#2#h2tg000057l unplaced-scaffold na na JAGYYU020000028.1 <> na Primary Assembly 778136 na HG01258#2#h2tg000059l unplaced-scaffold na na JAGYYU020000029.1 <> na Primary Assembly 149027 na HG01258#2#h2tg000062l unplaced-scaffold na na JAGYYU020000030.1 <> na Primary Assembly 64707 na HG01258#2#h2tg000064l unplaced-scaffold na na JAGYYU020000031.1 <> na Primary Assembly 205643 na HG01258#2#h2tg000066l unplaced-scaffold na na JAGYYU020000032.1 <> na Primary Assembly 91572 na HG01258#2#h2tg000067l unplaced-scaffold na na JAGYYU020000033.1 <> na Primary Assembly 196537 na HG01258#2#h2tg000070l unplaced-scaffold na na JAGYYU020000034.1 <> na Primary Assembly 343821 na HG01258#2#h2tg000071l unplaced-scaffold na na JAGYYU020000035.1 <> na Primary Assembly 148587 na HG01258#2#h2tg000073l unplaced-scaffold na na JAGYYU020000036.1 <> na Primary Assembly 169079 na HG01258#2#h2tg000075l unplaced-scaffold na na JAGYYU020000037.1 <> na Primary Assembly 134652 na HG01258#2#h2tg000076l unplaced-scaffold na na JAGYYU020000038.1 <> na Primary Assembly 134307 na HG01258#2#h2tg000084l unplaced-scaffold na na JAGYYU020000039.1 <> na Primary Assembly 75489 na HG01258#2#h2tg000086l unplaced-scaffold na na JAGYYU020000040.1 <> na Primary Assembly 153117 na HG01258#2#h2tg000093l unplaced-scaffold na na JAGYYU020000041.1 <> na Primary Assembly 203537 na HG01258#2#h2tg000095l unplaced-scaffold na na JAGYYU020000042.1 <> na Primary Assembly 87862 na HG01258#2#h2tg000096l unplaced-scaffold na na JAGYYU020000043.1 <> na Primary Assembly 77316 na HG01258#2#h2tg000098l unplaced-scaffold na na JAGYYU020000044.1 <> na Primary Assembly 92070 na HG01258#2#h2tg000099l unplaced-scaffold na na JAGYYU020000045.1 <> na Primary Assembly 198995 na HG01258#2#h2tg000102l unplaced-scaffold na na JAGYYU020000046.1 <> na Primary Assembly 69679 na HG01258#2#h2tg000104l unplaced-scaffold na na JAGYYU020000047.1 <> na Primary Assembly 55484 na HG01258#2#h2tg000003l unplaced-scaffold na na JAGYYU020000048.1 <> na Primary Assembly 130117101 na HG01258#2#h2tg000004l unplaced-scaffold na na JAGYYU020000049.1 <> na Primary Assembly 98488980 na HG01258#2#h2tg000011l unplaced-scaffold na na JAGYYU020000052.1 <> na Primary Assembly 102700526 na HG01258#2#h2tg000012l unplaced-scaffold na na JAGYYU020000053.1 <> na Primary Assembly 45847963 na HG01258#2#h2tg000019l unplaced-scaffold na na JAGYYU020000054.1 <> na Primary Assembly 92726532 na HG01258#2#h2tg000020l unplaced-scaffold na na JAGYYU020000055.1 <> na Primary Assembly 9118606 na HG01258#2#h2tg000024l unplaced-scaffold na na JAGYYU020000057.1 <> na Primary Assembly 1827459 na HG01258#2#h2tg000027l unplaced-scaffold na na JAGYYU020000058.1 <> na Primary Assembly 19103041 na HG01258#2#h2tg000030l unplaced-scaffold na na JAGYYU020000059.1 <> na Primary Assembly 2450365 na HG01258#2#h2tg000035l unplaced-scaffold na na JAGYYU020000060.1 <> na Primary Assembly 263063 na HG01258#2#h2tg000036l unplaced-scaffold na na JAGYYU020000061.1 <> na Primary Assembly 2458892 na HG01258#2#h2tg000038l unplaced-scaffold na na JAGYYU020000062.1 <> na Primary Assembly 990629 na HG01258#2#h2tg000039l unplaced-scaffold na na JAGYYU020000063.1 <> na Primary Assembly 559614 na HG01258#2#h2tg000040l unplaced-scaffold na na JAGYYU020000064.1 <> na Primary Assembly 406369 na HG01258#2#h2tg000042l unplaced-scaffold na na JAGYYU020000065.1 <> na Primary Assembly 3945987 na HG01258#2#h2tg000044l unplaced-scaffold na na JAGYYU020000066.1 <> na Primary Assembly 466650 na HG01258#2#h2tg000045l unplaced-scaffold na na JAGYYU020000067.1 <> na Primary Assembly 307055 na HG01258#2#h2tg000046l unplaced-scaffold na na JAGYYU020000068.1 <> na Primary Assembly 692324 na HG01258#2#h2tg000048l unplaced-scaffold na na JAGYYU020000069.1 <> na Primary Assembly 145270 na HG01258#2#h2tg000052l unplaced-scaffold na na JAGYYU020000070.1 <> na Primary Assembly 2211903 na HG01258#2#h2tg000053l unplaced-scaffold na na JAGYYU020000071.1 <> na Primary Assembly 58899 na HG01258#2#h2tg000054l unplaced-scaffold na na JAGYYU020000072.1 <> na Primary Assembly 68062 na HG01258#2#h2tg000058l unplaced-scaffold na na JAGYYU020000073.1 <> na Primary Assembly 139658 na HG01258#2#h2tg000060l unplaced-scaffold na na JAGYYU020000074.1 <> na Primary Assembly 237622 na HG01258#2#h2tg000061l unplaced-scaffold na na JAGYYU020000075.1 <> na Primary Assembly 262861 na HG01258#2#h2tg000063l unplaced-scaffold na na JAGYYU020000076.1 <> na Primary Assembly 178495 na HG01258#2#h2tg000065l unplaced-scaffold na na JAGYYU020000077.1 <> na Primary Assembly 266394 na HG01258#2#h2tg000069l unplaced-scaffold na na JAGYYU020000078.1 <> na Primary Assembly 139459 na HG01258#2#h2tg000077l unplaced-scaffold na na JAGYYU020000079.1 <> na Primary Assembly 162464 na HG01258#2#h2tg000078l unplaced-scaffold na na JAGYYU020000080.1 <> na Primary Assembly 58546 na HG01258#2#h2tg000079l unplaced-scaffold na na JAGYYU020000081.1 <> na Primary Assembly 153934 na HG01258#2#h2tg000082l unplaced-scaffold na na JAGYYU020000082.1 <> na Primary Assembly 160471 na HG01258#2#h2tg000083l unplaced-scaffold na na JAGYYU020000083.1 <> na Primary Assembly 163794 na HG01258#2#h2tg000085l unplaced-scaffold na na JAGYYU020000084.1 <> na Primary Assembly 115805 na HG01258#2#h2tg000088l unplaced-scaffold na na JAGYYU020000085.1 <> na Primary Assembly 239161 na HG01258#2#h2tg000091l unplaced-scaffold na na JAGYYU020000086.1 <> na Primary Assembly 53386 na HG01258#2#h2tg000092l unplaced-scaffold na na JAGYYU020000087.1 <> na Primary Assembly 89124 na HG01258#2#h2tg000100l unplaced-scaffold na na JAGYYU020000088.1 <> na Primary Assembly 128930 na HG01258#2#h2tg000101l unplaced-scaffold na na JAGYYU020000089.1 <> na Primary Assembly 53904 na HG01258#2#h2tg000103l unplaced-scaffold na na JAGYYU020000090.1 <> na Primary Assembly 63718 na HG01258#2#h2tg000108l unplaced-scaffold na na JAGYYU020000091.1 <> na Primary Assembly 53830 na HG01258#2#atg000004l_rotated unlocalized-scaffold MT Mitochondrion JAGYYU020000092.1 <> na non-nuclear 16560 na