# Assembly name: HG01978_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01978 # Sex: female # Taxid: 9606 # BioSample: SAMN17861662 # BioProject: PRJNA726175 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAGYVS02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 87x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018472845.2 # Linked assembly: GCA_018472865.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018472925.2 Primary Assembly ## GCA_042038445.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01978#2#h2tg000008l assembled-molecule 1 Chromosome CM089270.1 <> na Primary Assembly 248644348 na HG01978#2#h2tg000007l assembled-molecule 2 Chromosome CM089271.1 <> na Primary Assembly 242489254 na HG01978#2#h2tg000006l assembled-molecule 3 Chromosome CM089272.1 <> na Primary Assembly 199535386 na HG01978#2#h2tg000023l assembled-molecule 6 Chromosome CM089273.1 <> na Primary Assembly 171930296 na HG01978#2#h2tg000021l assembled-molecule 8 Chromosome CM089274.1 <> na Primary Assembly 146004350 na HG01978#2#h2tg000001l assembled-molecule 9 Chromosome CM089275.1 <> na Primary Assembly 133960273 na HG01978#2#h2tg000003l assembled-molecule 10 Chromosome CM089276.1 <> na Primary Assembly 137222114 na HG01978#2#h2tg000005l assembled-molecule 11 Chromosome CM089277.1 <> na Primary Assembly 138012273 na HG01978#2#h2tg000002l assembled-molecule 12 Chromosome CM089278.1 <> na Primary Assembly 132323874 na HG01978#2#h2tg000014l assembled-molecule 17 Chromosome CM089279.1 <> na Primary Assembly 82856120 na HG01978#2#h2tg000012l assembled-molecule 18 Chromosome CM089280.1 <> na Primary Assembly 81196238 na HG01978#2#h2tg000018l assembled-molecule 19 Chromosome CM089281.1 <> na Primary Assembly 62181566 na HG01978#2#h2tg000022l assembled-molecule 20 Chromosome CM089282.1 <> na Primary Assembly 66317160 na HG01978#2#h2tg000009l assembled-molecule X Chromosome CM089283.1 <> na Primary Assembly 154546725 na HG01978#2#h2tg000011l unplaced-scaffold na na JAGYVS020000006.1 <> na Primary Assembly 36583077 na HG01978#2#h2tg000016l unplaced-scaffold na na JAGYVS020000009.1 <> na Primary Assembly 58181656 na HG01978#2#h2tg000017l unplaced-scaffold na na JAGYVS020000010.1 <> na Primary Assembly 134322208 na HG01978#2#h2tg000024l unplaced-scaffold na na JAGYVS020000013.1 <> na Primary Assembly 34492729 na HG01978#2#h2tg000025l unplaced-scaffold na na JAGYVS020000014.1 <> na Primary Assembly 46102090 na HG01978#2#h2tg000026l unplaced-scaffold na na JAGYVS020000015.1 <> na Primary Assembly 45608209 na HG01978#2#h2tg000027l unplaced-scaffold na na JAGYVS020000016.1 <> na Primary Assembly 99597266 na HG01978#2#h2tg000032l unplaced-scaffold na na JAGYVS020000017.1 <> na Primary Assembly 2780840 na HG01978#2#h2tg000034l unplaced-scaffold na na JAGYVS020000018.1 <> na Primary Assembly 10234376 na HG01978#2#h2tg000038l unplaced-scaffold na na JAGYVS020000019.1 <> na Primary Assembly 56861 na HG01978#2#h2tg000042l unplaced-scaffold na na JAGYVS020000020.1 <> na Primary Assembly 1554856 na HG01978#2#h2tg000044l unplaced-scaffold na na JAGYVS020000021.1 <> na Primary Assembly 270052 na HG01978#2#h2tg000045l unplaced-scaffold na na JAGYVS020000022.1 <> na Primary Assembly 342384 na HG01978#2#h2tg000049l unplaced-scaffold na na JAGYVS020000023.1 <> na Primary Assembly 132396 na HG01978#2#h2tg000054l unplaced-scaffold na na JAGYVS020000024.1 <> na Primary Assembly 562595 na HG01978#2#h2tg000055l unplaced-scaffold na na JAGYVS020000025.1 <> na Primary Assembly 444082 na HG01978#2#h2tg000056l unplaced-scaffold na na JAGYVS020000026.1 <> na Primary Assembly 312148 na HG01978#2#h2tg000058l unplaced-scaffold na na JAGYVS020000027.1 <> na Primary Assembly 60880 na HG01978#2#h2tg000061l unplaced-scaffold na na JAGYVS020000028.1 <> na Primary Assembly 251106 na HG01978#2#h2tg000068l unplaced-scaffold na na JAGYVS020000029.1 <> na Primary Assembly 53732 na HG01978#2#h2tg000069l unplaced-scaffold na na JAGYVS020000030.1 <> na Primary Assembly 60521 na HG01978#2#h2tg000075l unplaced-scaffold na na JAGYVS020000031.1 <> na Primary Assembly 69515 na HG01978#2#h2tg000077l unplaced-scaffold na na JAGYVS020000032.1 <> na Primary Assembly 278143 na HG01978#2#h2tg000078l unplaced-scaffold na na JAGYVS020000033.1 <> na Primary Assembly 87360 na HG01978#2#h2tg000080l unplaced-scaffold na na JAGYVS020000034.1 <> na Primary Assembly 82710 na HG01978#2#h2tg000082l unplaced-scaffold na na JAGYVS020000035.1 <> na Primary Assembly 126564 na HG01978#2#h2tg000083l unplaced-scaffold na na JAGYVS020000036.1 <> na Primary Assembly 69288 na HG01978#2#h2tg000004l unplaced-scaffold na na JAGYVS020000038.1 <> na Primary Assembly 140725812 na HG01978#2#h2tg000010l unplaced-scaffold na na JAGYVS020000041.1 <> na Primary Assembly 97741635 na HG01978#2#h2tg000013l unplaced-scaffold na na JAGYVS020000042.1 <> na Primary Assembly 50775435 na HG01978#2#h2tg000015l unplaced-scaffold na na JAGYVS020000043.1 <> na Primary Assembly 93418445 na HG01978#2#h2tg000019l unplaced-scaffold na na JAGYVS020000044.1 <> na Primary Assembly 94945938 na HG01978#2#h2tg000020l unplaced-scaffold na na JAGYVS020000045.1 <> na Primary Assembly 61497043 na HG01978#2#h2tg000028l unplaced-scaffold na na JAGYVS020000048.1 <> na Primary Assembly 3997128 na HG01978#2#h2tg000029l unplaced-scaffold na na JAGYVS020000049.1 <> na Primary Assembly 492241 na HG01978#2#h2tg000030l unplaced-scaffold na na JAGYVS020000050.1 <> na Primary Assembly 2853150 na HG01978#2#h2tg000031l unplaced-scaffold na na JAGYVS020000051.1 <> na Primary Assembly 1031788 na HG01978#2#h2tg000033l unplaced-scaffold na na JAGYVS020000052.1 <> na Primary Assembly 729373 na HG01978#2#h2tg000035l unplaced-scaffold na na JAGYVS020000053.1 <> na Primary Assembly 1675855 na HG01978#2#h2tg000036l unplaced-scaffold na na JAGYVS020000054.1 <> na Primary Assembly 2970082 na HG01978#2#h2tg000037l unplaced-scaffold na na JAGYVS020000055.1 <> na Primary Assembly 3832632 na HG01978#2#h2tg000039l unplaced-scaffold na na JAGYVS020000056.1 <> na Primary Assembly 3055781 na HG01978#2#h2tg000040l unplaced-scaffold na na JAGYVS020000057.1 <> na Primary Assembly 3349153 na HG01978#2#h2tg000041l unplaced-scaffold na na JAGYVS020000058.1 <> na Primary Assembly 574226 na HG01978#2#h2tg000047l unplaced-scaffold na na JAGYVS020000059.1 <> na Primary Assembly 136900 na HG01978#2#h2tg000048l unplaced-scaffold na na JAGYVS020000060.1 <> na Primary Assembly 153829 na HG01978#2#h2tg000050l unplaced-scaffold na na JAGYVS020000061.1 <> na Primary Assembly 236220 na HG01978#2#h2tg000051l unplaced-scaffold na na JAGYVS020000062.1 <> na Primary Assembly 303470 na HG01978#2#h2tg000052l unplaced-scaffold na na JAGYVS020000063.1 <> na Primary Assembly 70307 na HG01978#2#h2tg000053l unplaced-scaffold na na JAGYVS020000064.1 <> na Primary Assembly 135643 na HG01978#2#h2tg000057l unplaced-scaffold na na JAGYVS020000065.1 <> na Primary Assembly 201204 na HG01978#2#h2tg000060l unplaced-scaffold na na JAGYVS020000066.1 <> na Primary Assembly 180652 na HG01978#2#h2tg000063l unplaced-scaffold na na JAGYVS020000067.1 <> na Primary Assembly 54007 na HG01978#2#h2tg000064l unplaced-scaffold na na JAGYVS020000068.1 <> na Primary Assembly 78991 na HG01978#2#h2tg000065l unplaced-scaffold na na JAGYVS020000069.1 <> na Primary Assembly 83628 na HG01978#2#h2tg000066l unplaced-scaffold na na JAGYVS020000070.1 <> na Primary Assembly 67858 na HG01978#2#h2tg000067l unplaced-scaffold na na JAGYVS020000071.1 <> na Primary Assembly 112200 na HG01978#2#h2tg000070l unplaced-scaffold na na JAGYVS020000072.1 <> na Primary Assembly 238979 na HG01978#2#h2tg000071l unplaced-scaffold na na JAGYVS020000073.1 <> na Primary Assembly 77179 na HG01978#2#h2tg000072l unplaced-scaffold na na JAGYVS020000074.1 <> na Primary Assembly 73279 na HG01978#2#h2tg000073l unplaced-scaffold na na JAGYVS020000075.1 <> na Primary Assembly 185042 na HG01978#2#h2tg000076l unplaced-scaffold na na JAGYVS020000076.1 <> na Primary Assembly 64175 na HG01978#2#h2tg000079l unplaced-scaffold na na JAGYVS020000077.1 <> na Primary Assembly 94638 na HG01978#2#h2tg000081l unplaced-scaffold na na JAGYVS020000078.1 <> na Primary Assembly 72203 na HG01978#2#h2tg000084l unplaced-scaffold na na JAGYVS020000079.1 <> na Primary Assembly 87695 na HG01978#2#h2tg000085l unplaced-scaffold na na JAGYVS020000080.1 <> na Primary Assembly 76535 na HG01978#2#h2tg000087l unplaced-scaffold na na JAGYVS020000081.1 <> na Primary Assembly 78823 na HG01978#2#h2tg000088l unplaced-scaffold na na JAGYVS020000082.1 <> na Primary Assembly 75141 na HG01978#2#ptg000001l_rotated unlocalized-scaffold MT Mitochondrion JAGYVS020000083.1 <> na non-nuclear 16571 na