# Assembly name: HG03540_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG03540 # Sex: female # Taxid: 9606 # BioSample: SAMN17861670 # BioProject: PRJNA726181 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAGYVY02 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 59x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018473315.2 # Linked assembly: GCA_018473295.2 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018473345.2 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG03540#1#h1tg000014l assembled-molecule 2 Chromosome CM088047.1 <> na Primary Assembly 241863113 na HG03540#1#h1tg000007l assembled-molecule 4 Chromosome CM088048.1 <> na Primary Assembly 191560320 na HG03540#1#h1tg000008l assembled-molecule 5 Chromosome CM088049.1 <> na Primary Assembly 182859982 na HG03540#1#h1tg000002l assembled-molecule 6 Chromosome CM088050.1 <> na Primary Assembly 172597714 na HG03540#1#h1tg000004l assembled-molecule 7 Chromosome CM088051.1 <> na Primary Assembly 160471611 na HG03540#1#h1tg000019l assembled-molecule 8 Chromosome CM088052.1 <> na Primary Assembly 147088386 na HG03540#1#h1tg000001l assembled-molecule 10 Chromosome CM088053.1 <> na Primary Assembly 134573985 na HG03540#1#h1tg000023l assembled-molecule 11 Chromosome CM088054.1 <> na Primary Assembly 136260357 na HG03540#1#h1tg000003l assembled-molecule 12 Chromosome CM088055.1 <> na Primary Assembly 132914900 na HG03540#1#h1tg000022l assembled-molecule 16 Chromosome CM088056.1 <> na Primary Assembly 92628575 na HG03540#1#h1tg000010l assembled-molecule 17 Chromosome CM088057.1 <> na Primary Assembly 83930480 na HG03540#1#h1tg000005l assembled-molecule 18 Chromosome CM088058.1 <> na Primary Assembly 79667973 na HG03540#1#h1tg000024l assembled-molecule 19 Chromosome CM088059.1 <> na Primary Assembly 61829059 na HG03540#1#h1tg000006l unplaced-scaffold na na JAGYVY020000004.1 <> na Primary Assembly 93974167 na HG03540#1#h1tg000013l unplaced-scaffold na na JAGYVY020000005.1 <> na Primary Assembly 37831145 na HG03540#1#h1tg000015l unplaced-scaffold na na JAGYVY020000007.1 <> na Primary Assembly 109791297 na HG03540#1#h1tg000016l unplaced-scaffold na na JAGYVY020000008.1 <> na Primary Assembly 92120552 na HG03540#1#h1tg000017l unplaced-scaffold na na JAGYVY020000009.1 <> na Primary Assembly 97360997 na HG03540#1#h1tg000020l unplaced-scaffold na na JAGYVY020000011.1 <> na Primary Assembly 140591745 na HG03540#1#h1tg000027l unplaced-scaffold na na JAGYVY020000012.1 <> na Primary Assembly 727592 na HG03540#1#h1tg000028l unplaced-scaffold na na JAGYVY020000013.1 <> na Primary Assembly 46693801 na HG03540#1#h1tg000030l unplaced-scaffold na na JAGYVY020000014.1 <> na Primary Assembly 1211505 na HG03540#1#h1tg000031l unplaced-scaffold na na JAGYVY020000015.1 <> na Primary Assembly 79715582 na HG03540#1#h1tg000032l unplaced-scaffold na na JAGYVY020000016.1 <> na Primary Assembly 5236762 na HG03540#1#h1tg000033l unplaced-scaffold na na JAGYVY020000017.1 <> na Primary Assembly 2706395 na HG03540#1#h1tg000039l unplaced-scaffold na na JAGYVY020000018.1 <> na Primary Assembly 956505 na HG03540#1#h1tg000041l unplaced-scaffold na na JAGYVY020000019.1 <> na Primary Assembly 139285 na HG03540#1#h1tg000042l unplaced-scaffold na na JAGYVY020000020.1 <> na Primary Assembly 1378568 na HG03540#1#h1tg000043l unplaced-scaffold na na JAGYVY020000021.1 <> na Primary Assembly 54388 na HG03540#1#h1tg000044l unplaced-scaffold na na JAGYVY020000022.1 <> na Primary Assembly 476902 na HG03540#1#h1tg000045l unplaced-scaffold na na JAGYVY020000023.1 <> na Primary Assembly 684357 na HG03540#1#h1tg000048l unplaced-scaffold na na JAGYVY020000024.1 <> na Primary Assembly 2469697 na HG03540#1#h1tg000052l unplaced-scaffold na na JAGYVY020000025.1 <> na Primary Assembly 144963 na HG03540#1#h1tg000053l unplaced-scaffold na na JAGYVY020000026.1 <> na Primary Assembly 104818 na HG03540#1#h1tg000054l unplaced-scaffold na na JAGYVY020000027.1 <> na Primary Assembly 324112 na HG03540#1#h1tg000056l unplaced-scaffold na na JAGYVY020000028.1 <> na Primary Assembly 1701385 na HG03540#1#h1tg000057l unplaced-scaffold na na JAGYVY020000029.1 <> na Primary Assembly 117849 na HG03540#1#h1tg000058l unplaced-scaffold na na JAGYVY020000030.1 <> na Primary Assembly 1522218 na HG03540#1#h1tg000060l unplaced-scaffold na na JAGYVY020000031.1 <> na Primary Assembly 1345106 na HG03540#1#h1tg000061l unplaced-scaffold na na JAGYVY020000032.1 <> na Primary Assembly 190417 na HG03540#1#h1tg000062l unplaced-scaffold na na JAGYVY020000033.1 <> na Primary Assembly 555724 na HG03540#1#h1tg000063l unplaced-scaffold na na JAGYVY020000034.1 <> na Primary Assembly 157482 na HG03540#1#h1tg000066l unplaced-scaffold na na JAGYVY020000035.1 <> na Primary Assembly 648349 na HG03540#1#h1tg000070l unplaced-scaffold na na JAGYVY020000036.1 <> na Primary Assembly 190588 na HG03540#1#h1tg000072l unplaced-scaffold na na JAGYVY020000037.1 <> na Primary Assembly 330328 na HG03540#1#h1tg000073l unplaced-scaffold na na JAGYVY020000038.1 <> na Primary Assembly 84490 na HG03540#1#h1tg000074l unplaced-scaffold na na JAGYVY020000039.1 <> na Primary Assembly 83373 na HG03540#1#h1tg000077l unplaced-scaffold na na JAGYVY020000040.1 <> na Primary Assembly 125031 na HG03540#1#h1tg000082l unplaced-scaffold na na JAGYVY020000041.1 <> na Primary Assembly 187762 na HG03540#1#h1tg000084l unplaced-scaffold na na JAGYVY020000042.1 <> na Primary Assembly 526659 na HG03540#1#h1tg000086l unplaced-scaffold na na JAGYVY020000043.1 <> na Primary Assembly 133021 na HG03540#1#h1tg000091l unplaced-scaffold na na JAGYVY020000044.1 <> na Primary Assembly 119956 na HG03540#1#h1tg000093l unplaced-scaffold na na JAGYVY020000045.1 <> na Primary Assembly 277830 na HG03540#1#h1tg000094l unplaced-scaffold na na JAGYVY020000046.1 <> na Primary Assembly 183046 na HG03540#1#h1tg000095l unplaced-scaffold na na JAGYVY020000047.1 <> na Primary Assembly 292857 na HG03540#1#h1tg000099l unplaced-scaffold na na JAGYVY020000048.1 <> na Primary Assembly 80899 na HG03540#1#h1tg000100l unplaced-scaffold na na JAGYVY020000049.1 <> na Primary Assembly 76209 na HG03540#1#h1tg000101l unplaced-scaffold na na JAGYVY020000050.1 <> na Primary Assembly 133783 na HG03540#1#h1tg000103l unplaced-scaffold na na JAGYVY020000051.1 <> na Primary Assembly 95381 na HG03540#1#h1tg000107l unplaced-scaffold na na JAGYVY020000052.1 <> na Primary Assembly 266841 na HG03540#1#h1tg000108l unplaced-scaffold na na JAGYVY020000053.1 <> na Primary Assembly 197191 na HG03540#1#h1tg000118l unplaced-scaffold na na JAGYVY020000054.1 <> na Primary Assembly 203198 na HG03540#1#h1tg000120l unplaced-scaffold na na JAGYVY020000055.1 <> na Primary Assembly 141652 na HG03540#1#h1tg000123l unplaced-scaffold na na JAGYVY020000056.1 <> na Primary Assembly 51914 na HG03540#1#h1tg000129l unplaced-scaffold na na JAGYVY020000057.1 <> na Primary Assembly 79123 na HG03540#1#h1tg000133l unplaced-scaffold na na JAGYVY020000058.1 <> na Primary Assembly 116187 na HG03540#1#h1tg000135l unplaced-scaffold na na JAGYVY020000059.1 <> na Primary Assembly 86522 na HG03540#1#h1tg000139l unplaced-scaffold na na JAGYVY020000060.1 <> na Primary Assembly 53884 na HG03540#1#h1tg000144l unplaced-scaffold na na JAGYVY020000061.1 <> na Primary Assembly 50545 na HG03540#1#h1tg000149l unplaced-scaffold na na JAGYVY020000062.1 <> na Primary Assembly 119883 na HG03540#1#h1tg000157l unplaced-scaffold na na JAGYVY020000063.1 <> na Primary Assembly 62655 na HG03540#1#h1tg000171l unplaced-scaffold na na JAGYVY020000064.1 <> na Primary Assembly 130654 na HG03540#1#h1tg000173l unplaced-scaffold na na JAGYVY020000065.1 <> na Primary Assembly 94216 na HG03540#1#h1tg000189l unplaced-scaffold na na JAGYVY020000066.1 <> na Primary Assembly 57325 na HG03540#1#h1tg000009l unplaced-scaffold na na JAGYVY020000071.1 <> na Primary Assembly 105245 na HG03540#1#h1tg000011l unplaced-scaffold na na JAGYVY020000073.1 <> na Primary Assembly 28372559 na HG03540#1#h1tg000012l unplaced-scaffold na na JAGYVY020000074.1 <> na Primary Assembly 106855795 na HG03540#1#h1tg000018l unplaced-scaffold na na JAGYVY020000075.1 <> na Primary Assembly 97673440 na HG03540#1#h1tg000021l unplaced-scaffold na na JAGYVY020000076.1 <> na Primary Assembly 57216628 na HG03540#1#h1tg000025l unplaced-scaffold na na JAGYVY020000080.1 <> na Primary Assembly 61299656 na HG03540#1#h1tg000026l unplaced-scaffold na na JAGYVY020000081.1 <> na Primary Assembly 44361210 na HG03540#1#h1tg000029l unplaced-scaffold na na JAGYVY020000082.1 <> na Primary Assembly 97405120 na HG03540#1#h1tg000034l unplaced-scaffold na na JAGYVY020000083.1 <> na Primary Assembly 1892856 na HG03540#1#h1tg000035l unplaced-scaffold na na JAGYVY020000084.1 <> na Primary Assembly 285020 na HG03540#1#h1tg000036l unplaced-scaffold na na JAGYVY020000085.1 <> na Primary Assembly 1379617 na HG03540#1#h1tg000037l unplaced-scaffold na na JAGYVY020000086.1 <> na Primary Assembly 3074615 na HG03540#1#h1tg000038l unplaced-scaffold na na JAGYVY020000087.1 <> na Primary Assembly 114274 na HG03540#1#h1tg000040l unplaced-scaffold na na JAGYVY020000088.1 <> na Primary Assembly 3521144 na HG03540#1#h1tg000046l unplaced-scaffold na na JAGYVY020000089.1 <> na Primary Assembly 167372 na HG03540#1#h1tg000049l unplaced-scaffold na na JAGYVY020000090.1 <> na Primary Assembly 280221 na HG03540#1#h1tg000051l unplaced-scaffold na na JAGYVY020000091.1 <> na Primary Assembly 1050815 na HG03540#1#h1tg000055l unplaced-scaffold na na JAGYVY020000092.1 <> na Primary Assembly 166939 na HG03540#1#h1tg000059l unplaced-scaffold na na JAGYVY020000093.1 <> na Primary Assembly 1968760 na HG03540#1#h1tg000064l unplaced-scaffold na na JAGYVY020000094.1 <> na Primary Assembly 250086 na HG03540#1#h1tg000068l unplaced-scaffold na na JAGYVY020000095.1 <> na Primary Assembly 204049 na HG03540#1#h1tg000071l unplaced-scaffold na na JAGYVY020000096.1 <> na Primary Assembly 4623992 na HG03540#1#h1tg000076l unplaced-scaffold na na JAGYVY020000097.1 <> na Primary Assembly 139896 na HG03540#1#h1tg000078l unplaced-scaffold na na JAGYVY020000098.1 <> na Primary Assembly 71215 na HG03540#1#h1tg000079l unplaced-scaffold na na JAGYVY020000099.1 <> na Primary Assembly 66816 na HG03540#1#h1tg000081l unplaced-scaffold na na JAGYVY020000100.1 <> na Primary Assembly 518767 na HG03540#1#h1tg000085l unplaced-scaffold na na JAGYVY020000101.1 <> na Primary Assembly 235063 na HG03540#1#h1tg000087l unplaced-scaffold na na JAGYVY020000102.1 <> na Primary Assembly 321281 na HG03540#1#h1tg000088l unplaced-scaffold na na JAGYVY020000103.1 <> na Primary Assembly 321627 na HG03540#1#h1tg000089l unplaced-scaffold na na JAGYVY020000104.1 <> na Primary Assembly 291318 na HG03540#1#h1tg000090l unplaced-scaffold na na JAGYVY020000105.1 <> na Primary Assembly 95193 na HG03540#1#h1tg000092l unplaced-scaffold na na JAGYVY020000106.1 <> na Primary Assembly 95147 na HG03540#1#h1tg000096l unplaced-scaffold na na JAGYVY020000107.1 <> na Primary Assembly 65002 na HG03540#1#h1tg000097l unplaced-scaffold na na JAGYVY020000108.1 <> na Primary Assembly 252827 na HG03540#1#h1tg000098l unplaced-scaffold na na JAGYVY020000109.1 <> na Primary Assembly 100818 na HG03540#1#h1tg000102l unplaced-scaffold na na JAGYVY020000110.1 <> na Primary Assembly 59882 na HG03540#1#h1tg000109l unplaced-scaffold na na JAGYVY020000111.1 <> na Primary Assembly 81042 na HG03540#1#h1tg000111l unplaced-scaffold na na JAGYVY020000112.1 <> na Primary Assembly 288514 na HG03540#1#h1tg000113l unplaced-scaffold na na JAGYVY020000113.1 <> na Primary Assembly 95175 na HG03540#1#h1tg000114l unplaced-scaffold na na JAGYVY020000114.1 <> na Primary Assembly 64129 na HG03540#1#h1tg000117l unplaced-scaffold na na JAGYVY020000115.1 <> na Primary Assembly 56640 na HG03540#1#h1tg000121l unplaced-scaffold na na JAGYVY020000116.1 <> na Primary Assembly 111142 na HG03540#1#h1tg000122l unplaced-scaffold na na JAGYVY020000117.1 <> na Primary Assembly 74219 na HG03540#1#h1tg000126l unplaced-scaffold na na JAGYVY020000118.1 <> na Primary Assembly 66902 na HG03540#1#h1tg000128l unplaced-scaffold na na JAGYVY020000119.1 <> na Primary Assembly 122479 na HG03540#1#h1tg000130l unplaced-scaffold na na JAGYVY020000120.1 <> na Primary Assembly 105024 na HG03540#1#h1tg000131l unplaced-scaffold na na JAGYVY020000121.1 <> na Primary Assembly 72168 na HG03540#1#h1tg000134l unplaced-scaffold na na JAGYVY020000122.1 <> na Primary Assembly 95538 na HG03540#1#h1tg000140l unplaced-scaffold na na JAGYVY020000123.1 <> na Primary Assembly 140914 na HG03540#1#h1tg000142l unplaced-scaffold na na JAGYVY020000124.1 <> na Primary Assembly 55672 na HG03540#1#h1tg000153l unplaced-scaffold na na JAGYVY020000125.1 <> na Primary Assembly 118441 na HG03540#1#h1tg000155l unplaced-scaffold na na JAGYVY020000126.1 <> na Primary Assembly 57993 na HG03540#1#h1tg000162l unplaced-scaffold na na JAGYVY020000127.1 <> na Primary Assembly 51025 na HG03540#1#h1tg000182l unplaced-scaffold na na JAGYVY020000128.1 <> na Primary Assembly 55082 na HG03540#1#h1tg000187l unplaced-scaffold na na JAGYVY020000129.1 <> na Primary Assembly 52246 na HG03540#1#h1tg000195l unplaced-scaffold na na JAGYVY020000130.1 <> na Primary Assembly 65194 na