# Assembly name: HG02080_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG02080 # Sex: female # Taxid: 9606 # BioSample: SAMN13957942 # BioProject: PRJNA727359 # Submitter: UCSC Genomics Institute # Date: 2024-10-17 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHEOV02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 62x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018504085.2 # Linked assembly: GCA_018504055.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018504195.2 Primary Assembly ## GCA_018504245.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG02080#2#h2tg000016l assembled-molecule 2 Chromosome CM092045.1 <> na Primary Assembly 242156269 na HG02080#2#h2tg000007l assembled-molecule 4 Chromosome CM092046.1 <> na Primary Assembly 191865628 na HG02080#2#h2tg000002l assembled-molecule 6 Chromosome CM092047.1 <> na Primary Assembly 172841848 na HG02080#2#h2tg000009l assembled-molecule 7 Chromosome CM092048.1 <> na Primary Assembly 162961984 na HG02080#2#h2tg000008l assembled-molecule 8 Chromosome CM092049.1 <> na Primary Assembly 146467361 na HG02080#2#h2tg000017l assembled-molecule 9 Chromosome CM092050.1 <> na Primary Assembly 138698082 na HG02080#2#h2tg000018l assembled-molecule 10 Chromosome CM092051.1 <> na Primary Assembly 135040520 na HG02080#2#h2tg000003l assembled-molecule 11 Chromosome CM092052.1 <> na Primary Assembly 135158856 na HG02080#2#h2tg000005l assembled-molecule 12 Chromosome CM092053.1 <> na Primary Assembly 134274214 na HG02080#2#h2tg000025l assembled-molecule 16 Chromosome CM092054.1 <> na Primary Assembly 89811148 na HG02080#2#h2tg000020l assembled-molecule 17 Chromosome CM092055.1 <> na Primary Assembly 83648541 na HG02080#2#h2tg000011l assembled-molecule 19 Chromosome CM092056.1 <> na Primary Assembly 62087392 na HG02080#2#h2tg000022l assembled-molecule 20 Chromosome CM092057.1 <> na Primary Assembly 67075931 na HG02080#2#h2tg000012l assembled-molecule X Chromosome CM092058.1 <> na Primary Assembly 154275954 na HG02080#2#h2tg000004l unplaced-scaffold na na JAHEOV020000002.1 <> na Primary Assembly 97626119 na HG02080#2#h2tg000006l unplaced-scaffold na na JAHEOV020000004.1 <> na Primary Assembly 107834207 na HG02080#2#h2tg000015l unplaced-scaffold na na JAHEOV020000008.1 <> na Primary Assembly 61719371 na HG02080#2#h2tg000019l unplaced-scaffold na na JAHEOV020000012.1 <> na Primary Assembly 39598235 na HG02080#2#h2tg000023l unplaced-scaffold na na JAHEOV020000015.1 <> na Primary Assembly 91891733 na HG02080#2#h2tg000026l unplaced-scaffold na na JAHEOV020000017.1 <> na Primary Assembly 6723780 na HG02080#2#h2tg000027l unplaced-scaffold na na JAHEOV020000018.1 <> na Primary Assembly 43844344 na HG02080#2#h2tg000028l unplaced-scaffold na na JAHEOV020000019.1 <> na Primary Assembly 1912783 na HG02080#2#h2tg000030l unplaced-scaffold na na JAHEOV020000020.1 <> na Primary Assembly 288210 na HG02080#2#h2tg000035l unplaced-scaffold na na JAHEOV020000021.1 <> na Primary Assembly 1385390 na HG02080#2#h2tg000036l unplaced-scaffold na na JAHEOV020000022.1 <> na Primary Assembly 3844341 na HG02080#2#h2tg000039l unplaced-scaffold na na JAHEOV020000023.1 <> na Primary Assembly 110572 na HG02080#2#h2tg000042l unplaced-scaffold na na JAHEOV020000024.1 <> na Primary Assembly 1431996 na HG02080#2#h2tg000043l unplaced-scaffold na na JAHEOV020000025.1 <> na Primary Assembly 169471 na HG02080#2#h2tg000044l unplaced-scaffold na na JAHEOV020000026.1 <> na Primary Assembly 104752 na HG02080#2#h2tg000048l unplaced-scaffold na na JAHEOV020000027.1 <> na Primary Assembly 355217 na HG02080#2#h2tg000051l unplaced-scaffold na na JAHEOV020000028.1 <> na Primary Assembly 154371 na HG02080#2#h2tg000053l unplaced-scaffold na na JAHEOV020000029.1 <> na Primary Assembly 68300 na HG02080#2#h2tg000055l unplaced-scaffold na na JAHEOV020000030.1 <> na Primary Assembly 146029 na HG02080#2#h2tg000056l unplaced-scaffold na na JAHEOV020000031.1 <> na Primary Assembly 102577 na HG02080#2#h2tg000057l unplaced-scaffold na na JAHEOV020000032.1 <> na Primary Assembly 100667 na HG02080#2#h2tg000060l unplaced-scaffold na na JAHEOV020000033.1 <> na Primary Assembly 101059 na HG02080#2#h2tg000062l unplaced-scaffold na na JAHEOV020000034.1 <> na Primary Assembly 64326 na HG02080#2#h2tg000067l unplaced-scaffold na na JAHEOV020000035.1 <> na Primary Assembly 59836 na HG02080#2#h2tg000069l unplaced-scaffold na na JAHEOV020000036.1 <> na Primary Assembly 274783 na HG02080#2#h2tg000073l unplaced-scaffold na na JAHEOV020000037.1 <> na Primary Assembly 63367 na HG02080#2#h2tg000074l unplaced-scaffold na na JAHEOV020000038.1 <> na Primary Assembly 66416 na HG02080#2#h2tg000078l unplaced-scaffold na na JAHEOV020000039.1 <> na Primary Assembly 189750 na HG02080#2#h2tg000079l unplaced-scaffold na na JAHEOV020000040.1 <> na Primary Assembly 193654 na HG02080#2#h2tg000080l unplaced-scaffold na na JAHEOV020000041.1 <> na Primary Assembly 53517 na HG02080#2#h2tg000082l unplaced-scaffold na na JAHEOV020000042.1 <> na Primary Assembly 71913 na HG02080#2#h2tg000083l unplaced-scaffold na na JAHEOV020000043.1 <> na Primary Assembly 130598 na HG02080#2#h2tg000086l unplaced-scaffold na na JAHEOV020000044.1 <> na Primary Assembly 66139 na HG02080#2#h2tg000087l unplaced-scaffold na na JAHEOV020000045.1 <> na Primary Assembly 104537 na HG02080#2#h2tg000090l unplaced-scaffold na na JAHEOV020000046.1 <> na Primary Assembly 66413 na HG02080#2#h2tg000091l unplaced-scaffold na na JAHEOV020000047.1 <> na Primary Assembly 95503 na HG02080#2#h2tg000093l unplaced-scaffold na na JAHEOV020000048.1 <> na Primary Assembly 162246 na HG02080#2#h2tg000097l unplaced-scaffold na na JAHEOV020000049.1 <> na Primary Assembly 188669 na HG02080#2#h2tg000100l unplaced-scaffold na na JAHEOV020000050.1 <> na Primary Assembly 73009 na HG02080#2#h2tg000101l unplaced-scaffold na na JAHEOV020000051.1 <> na Primary Assembly 220191 na HG02080#2#h2tg000106l unplaced-scaffold na na JAHEOV020000052.1 <> na Primary Assembly 55065 na HG02080#2#h2tg000111l unplaced-scaffold na na JAHEOV020000053.1 <> na Primary Assembly 52038 na HG02080#2#h2tg000116l unplaced-scaffold na na JAHEOV020000054.1 <> na Primary Assembly 52406 na HG02080#2#h2tg000001l unplaced-scaffold na na JAHEOV020000055.1 <> na Primary Assembly 182491794 na HG02080#2#h2tg000010l unplaced-scaffold na na JAHEOV020000058.1 <> na Primary Assembly 142274799 na HG02080#2#h2tg000013l unplaced-scaffold na na JAHEOV020000060.1 <> na Primary Assembly 96221483 na HG02080#2#h2tg000014l unplaced-scaffold na na JAHEOV020000061.1 <> na Primary Assembly 92664982 na HG02080#2#h2tg000021l unplaced-scaffold na na JAHEOV020000062.1 <> na Primary Assembly 1647796 na HG02080#2#h2tg000024l unplaced-scaffold na na JAHEOV020000063.1 <> na Primary Assembly 112042989 na HG02080#2#h2tg000029l unplaced-scaffold na na JAHEOV020000064.1 <> na Primary Assembly 18950964 na HG02080#2#h2tg000031l unplaced-scaffold na na JAHEOV020000065.1 <> na Primary Assembly 298607 na HG02080#2#h2tg000032l unplaced-scaffold na na JAHEOV020000066.1 <> na Primary Assembly 3015279 na HG02080#2#h2tg000033l unplaced-scaffold na na JAHEOV020000067.1 <> na Primary Assembly 466784 na HG02080#2#h2tg000034l unplaced-scaffold na na JAHEOV020000068.1 <> na Primary Assembly 1351411 na HG02080#2#h2tg000037l unplaced-scaffold na na JAHEOV020000069.1 <> na Primary Assembly 153197 na HG02080#2#h2tg000038l unplaced-scaffold na na JAHEOV020000070.1 <> na Primary Assembly 79570 na HG02080#2#h2tg000040l unplaced-scaffold na na JAHEOV020000071.1 <> na Primary Assembly 3006000 na HG02080#2#h2tg000041l unplaced-scaffold na na JAHEOV020000072.1 <> na Primary Assembly 427187 na HG02080#2#h2tg000045l unplaced-scaffold na na JAHEOV020000073.1 <> na Primary Assembly 245858 na HG02080#2#h2tg000046l unplaced-scaffold na na JAHEOV020000074.1 <> na Primary Assembly 142889 na HG02080#2#h2tg000047l unplaced-scaffold na na JAHEOV020000075.1 <> na Primary Assembly 55397 na HG02080#2#h2tg000049l unplaced-scaffold na na JAHEOV020000076.1 <> na Primary Assembly 332007 na HG02080#2#h2tg000050l unplaced-scaffold na na JAHEOV020000077.1 <> na Primary Assembly 473272 na HG02080#2#h2tg000052l unplaced-scaffold na na JAHEOV020000078.1 <> na Primary Assembly 320472 na HG02080#2#h2tg000054l unplaced-scaffold na na JAHEOV020000079.1 <> na Primary Assembly 219213 na HG02080#2#h2tg000058l unplaced-scaffold na na JAHEOV020000080.1 <> na Primary Assembly 379484 na HG02080#2#h2tg000059l unplaced-scaffold na na JAHEOV020000081.1 <> na Primary Assembly 96402 na HG02080#2#h2tg000061l unplaced-scaffold na na JAHEOV020000082.1 <> na Primary Assembly 370451 na HG02080#2#h2tg000063l unplaced-scaffold na na JAHEOV020000083.1 <> na Primary Assembly 66306 na HG02080#2#h2tg000065l unplaced-scaffold na na JAHEOV020000084.1 <> na Primary Assembly 428074 na HG02080#2#h2tg000066l unplaced-scaffold na na JAHEOV020000085.1 <> na Primary Assembly 88499 na HG02080#2#h2tg000068l unplaced-scaffold na na JAHEOV020000086.1 <> na Primary Assembly 80879 na HG02080#2#h2tg000071l unplaced-scaffold na na JAHEOV020000087.1 <> na Primary Assembly 115868 na HG02080#2#h2tg000072l unplaced-scaffold na na JAHEOV020000088.1 <> na Primary Assembly 77993 na HG02080#2#h2tg000077l unplaced-scaffold na na JAHEOV020000089.1 <> na Primary Assembly 70820 na HG02080#2#h2tg000081l unplaced-scaffold na na JAHEOV020000090.1 <> na Primary Assembly 156027 na HG02080#2#h2tg000084l unplaced-scaffold na na JAHEOV020000091.1 <> na Primary Assembly 132957 na HG02080#2#h2tg000089l unplaced-scaffold na na JAHEOV020000092.1 <> na Primary Assembly 55257 na HG02080#2#h2tg000092l unplaced-scaffold na na JAHEOV020000093.1 <> na Primary Assembly 130526 na HG02080#2#h2tg000094l unplaced-scaffold na na JAHEOV020000094.1 <> na Primary Assembly 70159 na HG02080#2#h2tg000095l unplaced-scaffold na na JAHEOV020000095.1 <> na Primary Assembly 52879 na HG02080#2#h2tg000096l unplaced-scaffold na na JAHEOV020000096.1 <> na Primary Assembly 134104 na HG02080#2#h2tg000098l unplaced-scaffold na na JAHEOV020000097.1 <> na Primary Assembly 82760 na HG02080#2#h2tg000099l unplaced-scaffold na na JAHEOV020000098.1 <> na Primary Assembly 58775 na HG02080#2#h2tg000102l unplaced-scaffold na na JAHEOV020000099.1 <> na Primary Assembly 98638 na HG02080#2#h2tg000103l unplaced-scaffold na na JAHEOV020000100.1 <> na Primary Assembly 63521 na HG02080#2#h2tg000104l unplaced-scaffold na na JAHEOV020000101.1 <> na Primary Assembly 59394 na HG02080#2#h2tg000107l unplaced-scaffold na na JAHEOV020000102.1 <> na Primary Assembly 55113 na HG02080#2#h2tg000115l unplaced-scaffold na na JAHEOV020000103.1 <> na Primary Assembly 70459 na HG02080#2#ptg000001l_rotated unlocalized-scaffold MT Mitochondrion JAHEOV020000104.1 <> na non-nuclear 16570 na