# Assembly name: NA20129_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: NA20129 # Sex: female # Taxid: 9606 # BioSample: SAMN13207712 # BioProject: PRJNA727367 # Submitter: UCSC Genomics Institute # Date: 2024-10-17 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHEPD02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 42x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018504635.2 # Linked assembly: GCA_018504625.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018504765.2 Primary Assembly ## GCA_018504785.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NA20129#2#h2tg000007l assembled-molecule 1 Chromosome CM092117.1 <> na Primary Assembly 252911102 na NA20129#2#h2tg000015l assembled-molecule 2 Chromosome CM092118.1 <> na Primary Assembly 242379042 na NA20129#2#h2tg000009l assembled-molecule 4 Chromosome CM092119.1 <> na Primary Assembly 192062981 na NA20129#2#h2tg000024l assembled-molecule 5 Chromosome CM092120.1 <> na Primary Assembly 183068858 na NA20129#2#h2tg000017l assembled-molecule 6 Chromosome CM092121.1 <> na Primary Assembly 172222833 na NA20129#2#h2tg000002l assembled-molecule 7 Chromosome CM092122.1 <> na Primary Assembly 158084833 na NA20129#2#h2tg000011l assembled-molecule 8 Chromosome CM092123.1 <> na Primary Assembly 146428448 na NA20129#2#h2tg000008l assembled-molecule 9 Chromosome CM092124.1 <> na Primary Assembly 150205574 na NA20129#2#h2tg000025l assembled-molecule 11 Chromosome CM092125.1 <> na Primary Assembly 133558575 na NA20129#2#h2tg000020l assembled-molecule 12 Chromosome CM092126.1 <> na Primary Assembly 134940907 na NA20129#2#h2tg000010l assembled-molecule 15 Chromosome CM092127.1 <> na Primary Assembly 94222495 na NA20129#2#h2tg000026l assembled-molecule 19 Chromosome CM092128.1 <> na Primary Assembly 63619503 na NA20129#2#h2tg000014l assembled-molecule 20 Chromosome CM092129.1 <> na Primary Assembly 65525361 na NA20129#2#h2tg000003l unplaced-scaffold na na JAHEPD020000001.1 <> na Primary Assembly 41792920 na NA20129#2#h2tg000004l unplaced-scaffold na na JAHEPD020000002.1 <> na Primary Assembly 76090735 na NA20129#2#h2tg000005l unplaced-scaffold na na JAHEPD020000003.1 <> na Primary Assembly 97898680 na NA20129#2#h2tg000012l unplaced-scaffold na na JAHEPD020000006.1 <> na Primary Assembly 57331342 na NA20129#2#h2tg000013l unplaced-scaffold na na JAHEPD020000007.1 <> na Primary Assembly 58483277 na NA20129#2#h2tg000016l unplaced-scaffold na na JAHEPD020000009.1 <> na Primary Assembly 39584720 na NA20129#2#h2tg000021l unplaced-scaffold na na JAHEPD020000011.1 <> na Primary Assembly 47248837 na NA20129#2#h2tg000022l unplaced-scaffold na na JAHEPD020000012.1 <> na Primary Assembly 26135236 na NA20129#2#h2tg000023l unplaced-scaffold na na JAHEPD020000013.1 <> na Primary Assembly 83097755 na NA20129#2#h2tg000027l unplaced-scaffold na na JAHEPD020000015.1 <> na Primary Assembly 37467025 na NA20129#2#h2tg000028l unplaced-scaffold na na JAHEPD020000016.1 <> na Primary Assembly 3175537 na NA20129#2#h2tg000031l unplaced-scaffold na na JAHEPD020000017.1 <> na Primary Assembly 18952177 na NA20129#2#h2tg000032l unplaced-scaffold na na JAHEPD020000018.1 <> na Primary Assembly 6307675 na NA20129#2#h2tg000033l unplaced-scaffold na na JAHEPD020000019.1 <> na Primary Assembly 48376825 na NA20129#2#h2tg000035l unplaced-scaffold na na JAHEPD020000020.1 <> na Primary Assembly 2143379 na NA20129#2#h2tg000036l unplaced-scaffold na na JAHEPD020000021.1 <> na Primary Assembly 3879620 na NA20129#2#h2tg000038l unplaced-scaffold na na JAHEPD020000022.1 <> na Primary Assembly 86854 na NA20129#2#h2tg000040l unplaced-scaffold na na JAHEPD020000023.1 <> na Primary Assembly 324685 na NA20129#2#h2tg000043l unplaced-scaffold na na JAHEPD020000024.1 <> na Primary Assembly 1420726 na NA20129#2#h2tg000045l unplaced-scaffold na na JAHEPD020000025.1 <> na Primary Assembly 894595 na NA20129#2#h2tg000046l unplaced-scaffold na na JAHEPD020000026.1 <> na Primary Assembly 111279 na NA20129#2#h2tg000051l unplaced-scaffold na na JAHEPD020000027.1 <> na Primary Assembly 98533 na NA20129#2#h2tg000052l unplaced-scaffold na na JAHEPD020000028.1 <> na Primary Assembly 214089 na NA20129#2#h2tg000059l unplaced-scaffold na na JAHEPD020000029.1 <> na Primary Assembly 130233 na NA20129#2#h2tg000061l unplaced-scaffold na na JAHEPD020000030.1 <> na Primary Assembly 180585 na NA20129#2#h2tg000062l unplaced-scaffold na na JAHEPD020000031.1 <> na Primary Assembly 74045 na NA20129#2#h2tg000063l unplaced-scaffold na na JAHEPD020000032.1 <> na Primary Assembly 174830 na NA20129#2#h2tg000067l unplaced-scaffold na na JAHEPD020000033.1 <> na Primary Assembly 82824 na NA20129#2#h2tg000071l unplaced-scaffold na na JAHEPD020000034.1 <> na Primary Assembly 67126 na NA20129#2#h2tg000072l unplaced-scaffold na na JAHEPD020000035.1 <> na Primary Assembly 168092 na NA20129#2#h2tg000076l unplaced-scaffold na na JAHEPD020000036.1 <> na Primary Assembly 159658 na NA20129#2#h2tg000078l unplaced-scaffold na na JAHEPD020000037.1 <> na Primary Assembly 245814 na NA20129#2#h2tg000080l unplaced-scaffold na na JAHEPD020000038.1 <> na Primary Assembly 129523 na NA20129#2#h2tg000088l unplaced-scaffold na na JAHEPD020000039.1 <> na Primary Assembly 136813 na NA20129#2#h2tg000092l unplaced-scaffold na na JAHEPD020000040.1 <> na Primary Assembly 249110 na NA20129#2#h2tg000096l unplaced-scaffold na na JAHEPD020000041.1 <> na Primary Assembly 124747 na NA20129#2#h2tg000106l unplaced-scaffold na na JAHEPD020000042.1 <> na Primary Assembly 68740 na NA20129#2#h2tg000109l unplaced-scaffold na na JAHEPD020000043.1 <> na Primary Assembly 62875 na NA20129#2#h2tg000112l unplaced-scaffold na na JAHEPD020000044.1 <> na Primary Assembly 64262 na NA20129#2#h2tg000116l unplaced-scaffold na na JAHEPD020000045.1 <> na Primary Assembly 59990 na NA20129#2#h2tg000001l unplaced-scaffold na na JAHEPD020000046.1 <> na Primary Assembly 94425056 na NA20129#2#h2tg000006l unplaced-scaffold na na JAHEPD020000048.1 <> na Primary Assembly 99736420 na NA20129#2#h2tg000018l unplaced-scaffold na na JAHEPD020000053.1 <> na Primary Assembly 135248830 na NA20129#2#h2tg000019l unplaced-scaffold na na JAHEPD020000054.1 <> na Primary Assembly 52457556 na NA20129#2#h2tg000029l unplaced-scaffold na na JAHEPD020000058.1 <> na Primary Assembly 2692531 na NA20129#2#h2tg000030l unplaced-scaffold na na JAHEPD020000059.1 <> na Primary Assembly 389333 na NA20129#2#h2tg000034l unplaced-scaffold na na JAHEPD020000060.1 <> na Primary Assembly 4968687 na NA20129#2#h2tg000037l unplaced-scaffold na na JAHEPD020000061.1 <> na Primary Assembly 8336072 na NA20129#2#h2tg000039l unplaced-scaffold na na JAHEPD020000062.1 <> na Primary Assembly 3410638 na NA20129#2#h2tg000041l unplaced-scaffold na na JAHEPD020000063.1 <> na Primary Assembly 371630 na NA20129#2#h2tg000042l unplaced-scaffold na na JAHEPD020000064.1 <> na Primary Assembly 1140807 na NA20129#2#h2tg000044l unplaced-scaffold na na JAHEPD020000065.1 <> na Primary Assembly 1055476 na NA20129#2#h2tg000047l unplaced-scaffold na na JAHEPD020000066.1 <> na Primary Assembly 314849 na NA20129#2#h2tg000048l unplaced-scaffold na na JAHEPD020000067.1 <> na Primary Assembly 695448 na NA20129#2#h2tg000049l unplaced-scaffold na na JAHEPD020000068.1 <> na Primary Assembly 159420 na NA20129#2#h2tg000050l unplaced-scaffold na na JAHEPD020000069.1 <> na Primary Assembly 520950 na NA20129#2#h2tg000054l unplaced-scaffold na na JAHEPD020000070.1 <> na Primary Assembly 403266 na NA20129#2#h2tg000056l unplaced-scaffold na na JAHEPD020000071.1 <> na Primary Assembly 92287 na NA20129#2#h2tg000057l unplaced-scaffold na na JAHEPD020000072.1 <> na Primary Assembly 164548 na NA20129#2#h2tg000058l unplaced-scaffold na na JAHEPD020000073.1 <> na Primary Assembly 273901 na NA20129#2#h2tg000060l unplaced-scaffold na na JAHEPD020000074.1 <> na Primary Assembly 149741 na NA20129#2#h2tg000064l unplaced-scaffold na na JAHEPD020000075.1 <> na Primary Assembly 112711 na NA20129#2#h2tg000066l unplaced-scaffold na na JAHEPD020000076.1 <> na Primary Assembly 137788 na NA20129#2#h2tg000068l unplaced-scaffold na na JAHEPD020000077.1 <> na Primary Assembly 131357 na NA20129#2#h2tg000069l unplaced-scaffold na na JAHEPD020000078.1 <> na Primary Assembly 123576 na NA20129#2#h2tg000073l unplaced-scaffold na na JAHEPD020000079.1 <> na Primary Assembly 54463 na NA20129#2#h2tg000075l unplaced-scaffold na na JAHEPD020000080.1 <> na Primary Assembly 62933 na NA20129#2#h2tg000077l unplaced-scaffold na na JAHEPD020000081.1 <> na Primary Assembly 193799 na NA20129#2#h2tg000079l unplaced-scaffold na na JAHEPD020000082.1 <> na Primary Assembly 587693 na NA20129#2#h2tg000081l unplaced-scaffold na na JAHEPD020000083.1 <> na Primary Assembly 182838 na NA20129#2#h2tg000082l unplaced-scaffold na na JAHEPD020000084.1 <> na Primary Assembly 80255 na NA20129#2#h2tg000083l unplaced-scaffold na na JAHEPD020000085.1 <> na Primary Assembly 55540 na NA20129#2#h2tg000084l unplaced-scaffold na na JAHEPD020000086.1 <> na Primary Assembly 68100 na NA20129#2#h2tg000087l unplaced-scaffold na na JAHEPD020000087.1 <> na Primary Assembly 95790 na NA20129#2#h2tg000089l unplaced-scaffold na na JAHEPD020000088.1 <> na Primary Assembly 79479 na NA20129#2#h2tg000090l unplaced-scaffold na na JAHEPD020000089.1 <> na Primary Assembly 65505 na NA20129#2#h2tg000091l unplaced-scaffold na na JAHEPD020000090.1 <> na Primary Assembly 65412 na NA20129#2#h2tg000099l unplaced-scaffold na na JAHEPD020000091.1 <> na Primary Assembly 125710 na NA20129#2#h2tg000100l unplaced-scaffold na na JAHEPD020000092.1 <> na Primary Assembly 94284 na NA20129#2#h2tg000101l unplaced-scaffold na na JAHEPD020000093.1 <> na Primary Assembly 90703 na NA20129#2#h2tg000108l unplaced-scaffold na na JAHEPD020000094.1 <> na Primary Assembly 76346 na NA20129#2#atg000013l_rotated unlocalized-scaffold MT Mitochondrion JAHEPD020000095.1 <> na non-nuclear 16569 na