# Assembly name: HG02109_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG02109 # Sex: female # Taxid: 9606 # BioSample: SAMN13958415 # BioProject: PRJNA727417 # Submitter: UCSC Genomics Institute # Date: 2024-10-17 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHEPG02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 71x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018505865.2 # Linked assembly: GCA_018505825.2 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018506035.2 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG02109#1#h1tg000001l assembled-molecule 3 Chromosome CM092158.1 <> na Primary Assembly 201906405 na HG02109#1#h1tg000009l assembled-molecule 4 Chromosome CM092159.1 <> na Primary Assembly 191464807 na HG02109#1#h1tg000014l assembled-molecule 5 Chromosome CM092160.1 <> na Primary Assembly 182738533 na HG02109#1#h1tg000008l assembled-molecule 6 Chromosome CM092161.1 <> na Primary Assembly 171841627 na HG02109#1#h1tg000015l assembled-molecule 7 Chromosome CM092162.1 <> na Primary Assembly 159606759 na HG02109#1#h1tg000010l assembled-molecule 8 Chromosome CM092163.1 <> na Primary Assembly 145847749 na HG02109#1#h1tg000026l assembled-molecule 9 Chromosome CM092164.1 <> na Primary Assembly 139920160 na HG02109#1#h1tg000013l assembled-molecule 10 Chromosome CM092165.1 <> na Primary Assembly 135493725 na HG02109#1#h1tg000005l assembled-molecule 11 Chromosome CM092166.1 <> na Primary Assembly 135037025 na HG02109#1#h1tg000011l assembled-molecule 12 Chromosome CM092167.1 <> na Primary Assembly 133539407 na HG02109#1#h1tg000004l assembled-molecule 14 Chromosome CM092168.1 <> na Primary Assembly 102810563 na HG02109#1#h1tg000007l assembled-molecule 16 Chromosome CM092169.1 <> na Primary Assembly 91406502 na HG02109#1#h1tg000022l assembled-molecule 20 Chromosome CM092170.1 <> na Primary Assembly 65768992 na HG02109#1#h1tg000025l assembled-molecule X Chromosome CM092171.1 <> na Primary Assembly 154951853 na HG02109#1#h1tg000002l unplaced-scaffold na na JAHEPG020000002.1 <> na Primary Assembly 89920500 na HG02109#1#h1tg000006l unplaced-scaffold na na JAHEPG020000004.1 <> na Primary Assembly 129394062 na HG02109#1#h1tg000012l unplaced-scaffold na na JAHEPG020000008.1 <> na Primary Assembly 106786056 na HG02109#1#h1tg000017l unplaced-scaffold na na JAHEPG020000011.1 <> na Primary Assembly 91048446 na HG02109#1#h1tg000018l unplaced-scaffold na na JAHEPG020000012.1 <> na Primary Assembly 105465358 na HG02109#1#h1tg000019l unplaced-scaffold na na JAHEPG020000013.1 <> na Primary Assembly 61033951 na HG02109#1#h1tg000020l unplaced-scaffold na na JAHEPG020000014.1 <> na Primary Assembly 153037445 na HG02109#1#h1tg000021l unplaced-scaffold na na JAHEPG020000015.1 <> na Primary Assembly 36453235 na HG02109#1#h1tg000023l unplaced-scaffold na na JAHEPG020000017.1 <> na Primary Assembly 17143140 na HG02109#1#h1tg000024l unplaced-scaffold na na JAHEPG020000018.1 <> na Primary Assembly 5198302 na HG02109#1#h1tg000027l unplaced-scaffold na na JAHEPG020000019.1 <> na Primary Assembly 60427773 na HG02109#1#h1tg000028l unplaced-scaffold na na JAHEPG020000020.1 <> na Primary Assembly 24440450 na HG02109#1#h1tg000030l unplaced-scaffold na na JAHEPG020000021.1 <> na Primary Assembly 4576548 na HG02109#1#h1tg000031l unplaced-scaffold na na JAHEPG020000022.1 <> na Primary Assembly 39929406 na HG02109#1#h1tg000033l unplaced-scaffold na na JAHEPG020000023.1 <> na Primary Assembly 181261 na HG02109#1#h1tg000038l unplaced-scaffold na na JAHEPG020000024.1 <> na Primary Assembly 1101759 na HG02109#1#h1tg000041l unplaced-scaffold na na JAHEPG020000025.1 <> na Primary Assembly 83212 na HG02109#1#h1tg000046l unplaced-scaffold na na JAHEPG020000026.1 <> na Primary Assembly 341011 na HG02109#1#h1tg000047l unplaced-scaffold na na JAHEPG020000027.1 <> na Primary Assembly 112529 na HG02109#1#h1tg000049l unplaced-scaffold na na JAHEPG020000028.1 <> na Primary Assembly 219086 na HG02109#1#h1tg000050l unplaced-scaffold na na JAHEPG020000029.1 <> na Primary Assembly 129886 na HG02109#1#h1tg000051l unplaced-scaffold na na JAHEPG020000030.1 <> na Primary Assembly 497937 na HG02109#1#h1tg000052l unplaced-scaffold na na JAHEPG020000031.1 <> na Primary Assembly 101821 na HG02109#1#h1tg000054l unplaced-scaffold na na JAHEPG020000032.1 <> na Primary Assembly 107375 na HG02109#1#h1tg000056l unplaced-scaffold na na JAHEPG020000033.1 <> na Primary Assembly 80236 na HG02109#1#h1tg000057l unplaced-scaffold na na JAHEPG020000034.1 <> na Primary Assembly 205738 na HG02109#1#h1tg000058l unplaced-scaffold na na JAHEPG020000035.1 <> na Primary Assembly 54049 na HG02109#1#h1tg000061l unplaced-scaffold na na JAHEPG020000036.1 <> na Primary Assembly 149036 na HG02109#1#h1tg000064l unplaced-scaffold na na JAHEPG020000037.1 <> na Primary Assembly 295081 na HG02109#1#h1tg000073l unplaced-scaffold na na JAHEPG020000038.1 <> na Primary Assembly 60582 na HG02109#1#h1tg000074l unplaced-scaffold na na JAHEPG020000039.1 <> na Primary Assembly 63106 na HG02109#1#h1tg000075l unplaced-scaffold na na JAHEPG020000040.1 <> na Primary Assembly 132881 na HG02109#1#h1tg000076l unplaced-scaffold na na JAHEPG020000041.1 <> na Primary Assembly 190538 na HG02109#1#h1tg000079l unplaced-scaffold na na JAHEPG020000042.1 <> na Primary Assembly 259387 na HG02109#1#h1tg000081l unplaced-scaffold na na JAHEPG020000043.1 <> na Primary Assembly 90056 na HG02109#1#h1tg000082l unplaced-scaffold na na JAHEPG020000044.1 <> na Primary Assembly 254342 na HG02109#1#h1tg000085l unplaced-scaffold na na JAHEPG020000045.1 <> na Primary Assembly 78340 na HG02109#1#h1tg000087l unplaced-scaffold na na JAHEPG020000046.1 <> na Primary Assembly 106027 na HG02109#1#h1tg000088l unplaced-scaffold na na JAHEPG020000047.1 <> na Primary Assembly 199287 na HG02109#1#h1tg000089l unplaced-scaffold na na JAHEPG020000048.1 <> na Primary Assembly 72223 na HG02109#1#h1tg000092l unplaced-scaffold na na JAHEPG020000049.1 <> na Primary Assembly 94756 na HG02109#1#h1tg000093l unplaced-scaffold na na JAHEPG020000050.1 <> na Primary Assembly 218997 na HG02109#1#h1tg000094l unplaced-scaffold na na JAHEPG020000051.1 <> na Primary Assembly 71875 na HG02109#1#h1tg000098l unplaced-scaffold na na JAHEPG020000052.1 <> na Primary Assembly 84660 na HG02109#1#h1tg000099l unplaced-scaffold na na JAHEPG020000053.1 <> na Primary Assembly 181028 na HG02109#1#h1tg000102l unplaced-scaffold na na JAHEPG020000054.1 <> na Primary Assembly 144494 na HG02109#1#h1tg000109l unplaced-scaffold na na JAHEPG020000055.1 <> na Primary Assembly 136471 na HG02109#1#h1tg000112l unplaced-scaffold na na JAHEPG020000056.1 <> na Primary Assembly 87673 na HG02109#1#h1tg000115l unplaced-scaffold na na JAHEPG020000057.1 <> na Primary Assembly 86767 na HG02109#1#h1tg000120l unplaced-scaffold na na JAHEPG020000058.1 <> na Primary Assembly 114155 na HG02109#1#h1tg000124l unplaced-scaffold na na JAHEPG020000059.1 <> na Primary Assembly 90689 na HG02109#1#h1tg000139l unplaced-scaffold na na JAHEPG020000060.1 <> na Primary Assembly 71048 na HG02109#1#h1tg000146l unplaced-scaffold na na JAHEPG020000061.1 <> na Primary Assembly 51970 na HG02109#1#h1tg000159l unplaced-scaffold na na JAHEPG020000062.1 <> na Primary Assembly 84593 na HG02109#1#h1tg000003l unplaced-scaffold na na JAHEPG020000063.1 <> na Primary Assembly 19810123 na HG02109#1#h1tg000016l unplaced-scaffold na na JAHEPG020000068.1 <> na Primary Assembly 44662611 na HG02109#1#h1tg000029l unplaced-scaffold na na JAHEPG020000071.1 <> na Primary Assembly 1987328 na HG02109#1#h1tg000032l unplaced-scaffold na na JAHEPG020000072.1 <> na Primary Assembly 2816901 na HG02109#1#h1tg000035l unplaced-scaffold na na JAHEPG020000073.1 <> na Primary Assembly 763908 na HG02109#1#h1tg000036l unplaced-scaffold na na JAHEPG020000074.1 <> na Primary Assembly 4633399 na HG02109#1#h1tg000037l unplaced-scaffold na na JAHEPG020000075.1 <> na Primary Assembly 86255 na HG02109#1#h1tg000039l unplaced-scaffold na na JAHEPG020000076.1 <> na Primary Assembly 3168244 na HG02109#1#h1tg000040l unplaced-scaffold na na JAHEPG020000077.1 <> na Primary Assembly 2268627 na HG02109#1#h1tg000042l unplaced-scaffold na na JAHEPG020000078.1 <> na Primary Assembly 1642766 na HG02109#1#h1tg000043l unplaced-scaffold na na JAHEPG020000079.1 <> na Primary Assembly 4244330 na HG02109#1#h1tg000044l unplaced-scaffold na na JAHEPG020000080.1 <> na Primary Assembly 729162 na HG02109#1#h1tg000045l unplaced-scaffold na na JAHEPG020000081.1 <> na Primary Assembly 520794 na HG02109#1#h1tg000048l unplaced-scaffold na na JAHEPG020000082.1 <> na Primary Assembly 215021 na HG02109#1#h1tg000053l unplaced-scaffold na na JAHEPG020000083.1 <> na Primary Assembly 1212866 na HG02109#1#h1tg000055l unplaced-scaffold na na JAHEPG020000084.1 <> na Primary Assembly 329519 na HG02109#1#h1tg000059l unplaced-scaffold na na JAHEPG020000085.1 <> na Primary Assembly 59495 na HG02109#1#h1tg000060l unplaced-scaffold na na JAHEPG020000086.1 <> na Primary Assembly 90554 na HG02109#1#h1tg000062l unplaced-scaffold na na JAHEPG020000087.1 <> na Primary Assembly 65369 na HG02109#1#h1tg000065l unplaced-scaffold na na JAHEPG020000088.1 <> na Primary Assembly 111604 na HG02109#1#h1tg000066l unplaced-scaffold na na JAHEPG020000089.1 <> na Primary Assembly 62587 na HG02109#1#h1tg000069l unplaced-scaffold na na JAHEPG020000090.1 <> na Primary Assembly 183159 na HG02109#1#h1tg000083l unplaced-scaffold na na JAHEPG020000091.1 <> na Primary Assembly 142245 na HG02109#1#h1tg000086l unplaced-scaffold na na JAHEPG020000092.1 <> na Primary Assembly 103548 na HG02109#1#h1tg000091l unplaced-scaffold na na JAHEPG020000093.1 <> na Primary Assembly 105853 na HG02109#1#h1tg000095l unplaced-scaffold na na JAHEPG020000094.1 <> na Primary Assembly 143696 na HG02109#1#h1tg000096l unplaced-scaffold na na JAHEPG020000095.1 <> na Primary Assembly 73947 na HG02109#1#h1tg000097l unplaced-scaffold na na JAHEPG020000096.1 <> na Primary Assembly 144043 na HG02109#1#h1tg000100l unplaced-scaffold na na JAHEPG020000097.1 <> na Primary Assembly 237661 na HG02109#1#h1tg000103l unplaced-scaffold na na JAHEPG020000098.1 <> na Primary Assembly 112868 na HG02109#1#h1tg000105l unplaced-scaffold na na JAHEPG020000099.1 <> na Primary Assembly 105857 na HG02109#1#h1tg000118l unplaced-scaffold na na JAHEPG020000100.1 <> na Primary Assembly 50493 na HG02109#1#h1tg000121l unplaced-scaffold na na JAHEPG020000101.1 <> na Primary Assembly 125398 na HG02109#1#h1tg000123l unplaced-scaffold na na JAHEPG020000102.1 <> na Primary Assembly 131305 na HG02109#1#h1tg000125l unplaced-scaffold na na JAHEPG020000103.1 <> na Primary Assembly 63734 na HG02109#1#h1tg000137l unplaced-scaffold na na JAHEPG020000104.1 <> na Primary Assembly 105050 na HG02109#1#h1tg000138l unplaced-scaffold na na JAHEPG020000105.1 <> na Primary Assembly 72853 na HG02109#1#h1tg000148l unplaced-scaffold na na JAHEPG020000106.1 <> na Primary Assembly 50923 na HG02109#1#h1tg000149l unplaced-scaffold na na JAHEPG020000107.1 <> na Primary Assembly 79384 na HG02109#1#h1tg000150l unplaced-scaffold na na JAHEPG020000108.1 <> na Primary Assembly 62892 na HG02109#1#h1tg000157l unplaced-scaffold na na JAHEPG020000109.1 <> na Primary Assembly 52753 na