# Assembly name: HG005_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: NA24631 # Sex: male # Taxid: 9606 # BioSample: SAMN03283350 # BioProject: PRJNA727429 # Submitter: UCSC Genomics Institute # Date: 2024-12-13 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHEPN02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 57x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018506965.2 # Linked assembly: GCA_018506945.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018507005.2 Primary Assembly ## GCA_018507095.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG005#2#h2tg000005l assembled-molecule 2 Chromosome CM099973.1 <> na Primary Assembly 242296380 na HG005#2#h2tg000014l assembled-molecule 3 Chromosome CM099974.1 <> na Primary Assembly 200852347 na HG005#2#h2tg000017l assembled-molecule 6 Chromosome CM099975.1 <> na Primary Assembly 172083328 na HG005#2#h2tg000009l assembled-molecule 7 Chromosome CM099976.1 <> na Primary Assembly 160679575 na HG005#2#h2tg000011l assembled-molecule 8 Chromosome CM099977.1 <> na Primary Assembly 145152378 na HG005#2#h2tg000022l assembled-molecule 9 Chromosome CM099978.1 <> na Primary Assembly 133010346 na HG005#2#h2tg000001l assembled-molecule 10 Chromosome CM099979.1 <> na Primary Assembly 134814461 na HG005#2#h2tg000004l assembled-molecule 11 Chromosome CM099980.1 <> na Primary Assembly 134978464 na HG005#2#h2tg000023l assembled-molecule 17 Chromosome CM099981.1 <> na Primary Assembly 85189087 na HG005#2#h2tg000008l assembled-molecule 19 Chromosome CM099982.1 <> na Primary Assembly 63280514 na HG005#2#h2tg000028l assembled-molecule 20 Chromosome CM099983.1 <> na Primary Assembly 67203870 na HG005#2#h2tg000003l unplaced-scaffold na na JAHEPN020000002.1 <> na Primary Assembly 131935923 na HG005#2#h2tg000006l unplaced-scaffold na na JAHEPN020000004.1 <> na Primary Assembly 90991069 na HG005#2#h2tg000007l unplaced-scaffold na na JAHEPN020000005.1 <> na Primary Assembly 103220907 na HG005#2#h2tg000010l unplaced-scaffold na na JAHEPN020000007.1 <> na Primary Assembly 52202448 na HG005#2#h2tg000012l unplaced-scaffold na na JAHEPN020000009.1 <> na Primary Assembly 135419260 na HG005#2#h2tg000013l unplaced-scaffold na na JAHEPN020000010.1 <> na Primary Assembly 61893789 na HG005#2#h2tg000015l unplaced-scaffold na na JAHEPN020000011.1 <> na Primary Assembly 98117127 na HG005#2#h2tg000016l unplaced-scaffold na na JAHEPN020000012.1 <> na Primary Assembly 118386819 na HG005#2#h2tg000018l unplaced-scaffold na na JAHEPN020000014.1 <> na Primary Assembly 39565867 na HG005#2#h2tg000025l unplaced-scaffold na na JAHEPN020000016.1 <> na Primary Assembly 41602206 na HG005#2#h2tg000026l unplaced-scaffold na na JAHEPN020000017.1 <> na Primary Assembly 35896087 na HG005#2#h2tg000029l unplaced-scaffold na na JAHEPN020000019.1 <> na Primary Assembly 97226772 na HG005#2#h2tg000030l unplaced-scaffold na na JAHEPN020000020.1 <> na Primary Assembly 1267049 na HG005#2#h2tg000032l unplaced-scaffold na na JAHEPN020000021.1 <> na Primary Assembly 2456482 na HG005#2#h2tg000034l unplaced-scaffold na na JAHEPN020000022.1 <> na Primary Assembly 2139372 na HG005#2#h2tg000037l unplaced-scaffold na na JAHEPN020000023.1 <> na Primary Assembly 413023 na HG005#2#h2tg000039l unplaced-scaffold na na JAHEPN020000024.1 <> na Primary Assembly 22786139 na HG005#2#h2tg000040l unplaced-scaffold na na JAHEPN020000025.1 <> na Primary Assembly 511297 na HG005#2#h2tg000047l unplaced-scaffold na na JAHEPN020000026.1 <> na Primary Assembly 376928 na HG005#2#h2tg000050l unplaced-scaffold na na JAHEPN020000027.1 <> na Primary Assembly 236022 na HG005#2#h2tg000051l unplaced-scaffold na na JAHEPN020000028.1 <> na Primary Assembly 6005727 na HG005#2#h2tg000052l unplaced-scaffold na na JAHEPN020000029.1 <> na Primary Assembly 2529096 na HG005#2#h2tg000057l unplaced-scaffold na na JAHEPN020000030.1 <> na Primary Assembly 311879 na HG005#2#h2tg000065l unplaced-scaffold na na JAHEPN020000031.1 <> na Primary Assembly 96526 na HG005#2#h2tg000067l unplaced-scaffold na na JAHEPN020000032.1 <> na Primary Assembly 184093 na HG005#2#h2tg000068l unplaced-scaffold na na JAHEPN020000033.1 <> na Primary Assembly 86063 na HG005#2#h2tg000069l unplaced-scaffold na na JAHEPN020000034.1 <> na Primary Assembly 434474 na HG005#2#h2tg000070l unplaced-scaffold na na JAHEPN020000035.1 <> na Primary Assembly 563914 na HG005#2#h2tg000073l unplaced-scaffold na na JAHEPN020000036.1 <> na Primary Assembly 1794865 na HG005#2#h2tg000079l unplaced-scaffold na na JAHEPN020000037.1 <> na Primary Assembly 55329 na HG005#2#h2tg000085l unplaced-scaffold na na JAHEPN020000038.1 <> na Primary Assembly 75575 na HG005#2#h2tg000086l unplaced-scaffold na na JAHEPN020000039.1 <> na Primary Assembly 186546 na HG005#2#h2tg000095l unplaced-scaffold na na JAHEPN020000040.1 <> na Primary Assembly 183221 na HG005#2#h2tg000098l unplaced-scaffold na na JAHEPN020000041.1 <> na Primary Assembly 316420 na HG005#2#h2tg000099l unplaced-scaffold na na JAHEPN020000042.1 <> na Primary Assembly 121325 na HG005#2#h2tg000102l unplaced-scaffold na na JAHEPN020000043.1 <> na Primary Assembly 312052 na HG005#2#h2tg000103l unplaced-scaffold na na JAHEPN020000044.1 <> na Primary Assembly 204762 na HG005#2#h2tg000104l unplaced-scaffold na na JAHEPN020000045.1 <> na Primary Assembly 172262 na HG005#2#h2tg000112l unplaced-scaffold na na JAHEPN020000046.1 <> na Primary Assembly 156273 na HG005#2#h2tg000116l unplaced-scaffold na na JAHEPN020000047.1 <> na Primary Assembly 248458 na HG005#2#h2tg000119l unplaced-scaffold na na JAHEPN020000048.1 <> na Primary Assembly 133541 na HG005#2#h2tg000125l unplaced-scaffold na na JAHEPN020000049.1 <> na Primary Assembly 74227 na HG005#2#h2tg000128l unplaced-scaffold na na JAHEPN020000050.1 <> na Primary Assembly 185206 na HG005#2#h2tg000132l unplaced-scaffold na na JAHEPN020000051.1 <> na Primary Assembly 113811 na HG005#2#h2tg000134l unplaced-scaffold na na JAHEPN020000052.1 <> na Primary Assembly 295806 na HG005#2#h2tg000135l unplaced-scaffold na na JAHEPN020000053.1 <> na Primary Assembly 51146 na HG005#2#h2tg000137l unplaced-scaffold na na JAHEPN020000054.1 <> na Primary Assembly 97212 na HG005#2#h2tg000140l unplaced-scaffold na na JAHEPN020000055.1 <> na Primary Assembly 92646 na HG005#2#h2tg000143l unplaced-scaffold na na JAHEPN020000056.1 <> na Primary Assembly 124257 na HG005#2#h2tg000153l unplaced-scaffold na na JAHEPN020000057.1 <> na Primary Assembly 282606 na HG005#2#h2tg000158l unplaced-scaffold na na JAHEPN020000058.1 <> na Primary Assembly 84998 na HG005#2#h2tg000162l unplaced-scaffold na na JAHEPN020000059.1 <> na Primary Assembly 104512 na HG005#2#h2tg000168l unplaced-scaffold na na JAHEPN020000060.1 <> na Primary Assembly 63141 na HG005#2#h2tg000171l unplaced-scaffold na na JAHEPN020000061.1 <> na Primary Assembly 73717 na HG005#2#h2tg000173l unplaced-scaffold na na JAHEPN020000062.1 <> na Primary Assembly 77921 na HG005#2#h2tg000175l unplaced-scaffold na na JAHEPN020000063.1 <> na Primary Assembly 56943 na HG005#2#h2tg000180l unplaced-scaffold na na JAHEPN020000064.1 <> na Primary Assembly 69799 na HG005#2#h2tg000182l unplaced-scaffold na na JAHEPN020000065.1 <> na Primary Assembly 106466 na HG005#2#h2tg000189l unplaced-scaffold na na JAHEPN020000066.1 <> na Primary Assembly 62501 na HG005#2#h2tg000197l unplaced-scaffold na na JAHEPN020000067.1 <> na Primary Assembly 88755 na HG005#2#h2tg000201l unplaced-scaffold na na JAHEPN020000068.1 <> na Primary Assembly 50364 na HG005#2#h2tg000206l unplaced-scaffold na na JAHEPN020000069.1 <> na Primary Assembly 54916 na HG005#2#h2tg000213l unplaced-scaffold na na JAHEPN020000070.1 <> na Primary Assembly 85783 na HG005#2#h2tg000002l unplaced-scaffold na na JAHEPN020000071.1 <> na Primary Assembly 190170087 na HG005#2#h2tg000019l unplaced-scaffold na na JAHEPN020000075.1 <> na Primary Assembly 3801315 na HG005#2#h2tg000020l unplaced-scaffold na na JAHEPN020000076.1 <> na Primary Assembly 90711266 na HG005#2#h2tg000021l unplaced-scaffold na na JAHEPN020000077.1 <> na Primary Assembly 70049782 na HG005#2#h2tg000024l unplaced-scaffold na na JAHEPN020000079.1 <> na Primary Assembly 439176 na HG005#2#h2tg000027l unplaced-scaffold na na JAHEPN020000080.1 <> na Primary Assembly 47070283 na HG005#2#h2tg000031l unplaced-scaffold na na JAHEPN020000081.1 <> na Primary Assembly 18431985 na HG005#2#h2tg000033l unplaced-scaffold na na JAHEPN020000082.1 <> na Primary Assembly 108535 na HG005#2#h2tg000036l unplaced-scaffold na na JAHEPN020000083.1 <> na Primary Assembly 4131544 na HG005#2#h2tg000038l unplaced-scaffold na na JAHEPN020000084.1 <> na Primary Assembly 2702913 na HG005#2#h2tg000041l unplaced-scaffold na na JAHEPN020000085.1 <> na Primary Assembly 78871 na HG005#2#h2tg000043l unplaced-scaffold na na JAHEPN020000086.1 <> na Primary Assembly 4011633 na HG005#2#h2tg000049l unplaced-scaffold na na JAHEPN020000087.1 <> na Primary Assembly 174083 na HG005#2#h2tg000054l unplaced-scaffold na na JAHEPN020000088.1 <> na Primary Assembly 890629 na HG005#2#h2tg000055l unplaced-scaffold na na JAHEPN020000089.1 <> na Primary Assembly 526502 na HG005#2#h2tg000058l unplaced-scaffold na na JAHEPN020000090.1 <> na Primary Assembly 2851360 na HG005#2#h2tg000059l unplaced-scaffold na na JAHEPN020000091.1 <> na Primary Assembly 524299 na HG005#2#h2tg000060l unplaced-scaffold na na JAHEPN020000092.1 <> na Primary Assembly 433026 na HG005#2#h2tg000061l unplaced-scaffold na na JAHEPN020000093.1 <> na Primary Assembly 3371759 na HG005#2#h2tg000062l unplaced-scaffold na na JAHEPN020000094.1 <> na Primary Assembly 78650 na HG005#2#h2tg000064l unplaced-scaffold na na JAHEPN020000095.1 <> na Primary Assembly 193416 na HG005#2#h2tg000066l unplaced-scaffold na na JAHEPN020000096.1 <> na Primary Assembly 167674 na HG005#2#h2tg000074l unplaced-scaffold na na JAHEPN020000097.1 <> na Primary Assembly 72619 na HG005#2#h2tg000075l unplaced-scaffold na na JAHEPN020000098.1 <> na Primary Assembly 428208 na HG005#2#h2tg000083l unplaced-scaffold na na JAHEPN020000099.1 <> na Primary Assembly 896261 na HG005#2#h2tg000088l unplaced-scaffold na na JAHEPN020000100.1 <> na Primary Assembly 185261 na HG005#2#h2tg000092l unplaced-scaffold na na JAHEPN020000101.1 <> na Primary Assembly 832858 na HG005#2#h2tg000093l unplaced-scaffold na na JAHEPN020000102.1 <> na Primary Assembly 170794 na HG005#2#h2tg000094l unplaced-scaffold na na JAHEPN020000103.1 <> na Primary Assembly 132229 na HG005#2#h2tg000096l unplaced-scaffold na na JAHEPN020000104.1 <> na Primary Assembly 222714 na HG005#2#h2tg000100l unplaced-scaffold na na JAHEPN020000105.1 <> na Primary Assembly 84541 na HG005#2#h2tg000109l unplaced-scaffold na na JAHEPN020000106.1 <> na Primary Assembly 110376 na HG005#2#h2tg000110l unplaced-scaffold na na JAHEPN020000107.1 <> na Primary Assembly 88246 na HG005#2#h2tg000113l unplaced-scaffold na na JAHEPN020000108.1 <> na Primary Assembly 90867 na HG005#2#h2tg000115l unplaced-scaffold na na JAHEPN020000109.1 <> na Primary Assembly 133194 na HG005#2#h2tg000122l unplaced-scaffold na na JAHEPN020000110.1 <> na Primary Assembly 331317 na HG005#2#h2tg000130l unplaced-scaffold na na JAHEPN020000111.1 <> na Primary Assembly 91493 na HG005#2#h2tg000133l unplaced-scaffold na na JAHEPN020000112.1 <> na Primary Assembly 102998 na HG005#2#h2tg000136l unplaced-scaffold na na JAHEPN020000113.1 <> na Primary Assembly 104344 na HG005#2#h2tg000139l unplaced-scaffold na na JAHEPN020000114.1 <> na Primary Assembly 61139 na HG005#2#h2tg000142l unplaced-scaffold na na JAHEPN020000115.1 <> na Primary Assembly 78726 na HG005#2#h2tg000148l unplaced-scaffold na na JAHEPN020000116.1 <> na Primary Assembly 102253 na HG005#2#h2tg000149l unplaced-scaffold na na JAHEPN020000117.1 <> na Primary Assembly 137214 na HG005#2#h2tg000150l unplaced-scaffold na na JAHEPN020000118.1 <> na Primary Assembly 73401 na HG005#2#h2tg000154l unplaced-scaffold na na JAHEPN020000119.1 <> na Primary Assembly 57077 na HG005#2#h2tg000155l unplaced-scaffold na na JAHEPN020000120.1 <> na Primary Assembly 121522 na HG005#2#h2tg000159l unplaced-scaffold na na JAHEPN020000121.1 <> na Primary Assembly 58492 na HG005#2#h2tg000160l unplaced-scaffold na na JAHEPN020000122.1 <> na Primary Assembly 50083 na HG005#2#h2tg000161l unplaced-scaffold na na JAHEPN020000123.1 <> na Primary Assembly 83511 na HG005#2#h2tg000164l unplaced-scaffold na na JAHEPN020000124.1 <> na Primary Assembly 71253 na HG005#2#h2tg000165l unplaced-scaffold na na JAHEPN020000125.1 <> na Primary Assembly 58362 na HG005#2#h2tg000166l unplaced-scaffold na na JAHEPN020000126.1 <> na Primary Assembly 71803 na HG005#2#h2tg000177l unplaced-scaffold na na JAHEPN020000127.1 <> na Primary Assembly 172090 na HG005#2#h2tg000185l unplaced-scaffold na na JAHEPN020000128.1 <> na Primary Assembly 97809 na HG005#2#h2tg000186l unplaced-scaffold na na JAHEPN020000129.1 <> na Primary Assembly 152562 na HG005#2#h2tg000187l unplaced-scaffold na na JAHEPN020000130.1 <> na Primary Assembly 55731 na HG005#2#h2tg000188l unplaced-scaffold na na JAHEPN020000131.1 <> na Primary Assembly 126561 na HG005#2#h2tg000199l unplaced-scaffold na na JAHEPN020000132.1 <> na Primary Assembly 116301 na HG005#2#h2tg000203l unplaced-scaffold na na JAHEPN020000133.1 <> na Primary Assembly 105559 na HG005#2#h2tg000209l unplaced-scaffold na na JAHEPN020000134.1 <> na Primary Assembly 74957 na HG005#2#ptg000032l_rc_rotated unlocalized-scaffold MT Mitochondrion JAHEPN020000135.1 <> na non-nuclear 16566 na