# Assembly name:  UPITT_Tgon_RH88_1.0
# Organism name:  Toxoplasma gondii (apicomplexans)
# Infraspecific name:  strain=RH88
# Taxid:          5811
# BioSample:      SAMN15203629
# BioProject:     PRJNA638608
# Submitter:      University of Pittsburgh
# Date:           2021-08-09
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JADBJC01
# Assembly method: Canu v. 2
# Expected final version: yes
# Genome coverage: 114x
# Sequencing technology: Oxford Nanopore MinION
# GenBank assembly accession: GCA_019455545.1
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_019455575.1		Primary Assembly
## GCA_019455595.1		non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
TgRH88_tig00000106_chrIa	assembled-molecule	Ia	Chromosome	CM033556.1	<>	na	Primary Assembly	1905105	na
TgRH88_tig00000006_chrIb	assembled-molecule	Ib	Chromosome	CM033557.1	<>	na	Primary Assembly	2036895	na
TgRH88_tig00000031_chrII	assembled-molecule	II	Chromosome	CM033558.1	<>	na	Primary Assembly	2517460	na
TgRH88_tig00000013_chrIII	assembled-molecule	III	Chromosome	CM033559.1	<>	na	Primary Assembly	2653274	na
TgRH88_tig00000014_chrIV	assembled-molecule	IV	Chromosome	CM033560.1	<>	na	Primary Assembly	2784263	na
TgRH88_tig00000029_chrV	assembled-molecule	V	Chromosome	CM033561.1	<>	na	Primary Assembly	3482671	na
TgRH88_tig00000022_chrVI	assembled-molecule	VI	Chromosome	CM033562.1	<>	na	Primary Assembly	3884487	na
TgRH88_tig00000012_chrVIIa	assembled-molecule	VIIa	Chromosome	CM033563.1	<>	na	Primary Assembly	4643533	na
TgRH88_tig00000030_chrVIII	assembled-molecule	VIII	Chromosome	CM033564.1	<>	na	Primary Assembly	12055564	na
TgRH88_tig00000001_chrIX	assembled-molecule	IX	Chromosome	CM033565.1	<>	na	Primary Assembly	6606532	na
TgRH88_tig00000003_chrX	assembled-molecule	X	Chromosome	CM033566.1	<>	na	Primary Assembly	7796787	na
TgRH88_scf00000009_chrXI	assembled-molecule	XI	Chromosome	CM033567.1	<>	na	Primary Assembly	6778623	na
TgRH88_tig00000025_chrXII	assembled-molecule	XII	Chromosome	CM033568.1	<>	na	Primary Assembly	7343238	na
TgRH88_tig00000028	unplaced-scaffold	na	na	JADBJC010000014.1	<>	na	Primary Assembly	134952	na
TgRH88_tig00000033	unplaced-scaffold	na	na	JADBJC010000015.1	<>	na	Primary Assembly	28024	na
TgRH88_tig00000046	unplaced-scaffold	na	na	JADBJC010000016.1	<>	na	Primary Assembly	75177	na
TgRH88_tig00000049	unplaced-scaffold	na	na	JADBJC010000017.1	<>	na	Primary Assembly	81925	na
TgRH88_tig00000082	unplaced-scaffold	na	na	JADBJC010000018.1	<>	na	Primary Assembly	42770	na
TgRH88_tig00000088	assembled-molecule	Api	Apicoplast	CM033583.1	<>	na	non-nuclear	34855	na