# Assembly name: ASM2018611v1 # Organism name: Histomonas meleagridis (eukaryotes) # Infraspecific name: strain=2922-C6/04-10x # Taxid: 135588 # BioSample: SAMN13511252 # BioProject: PRJNA594289 # Submitter: University Clinic for Poultry and Fish Medicine - Vetmeduni Vienna # Date: 2021-09-30 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: WSYJ01 # Assembly method: Flye v. 2.6 # Expected final version: yes # Genome coverage: 200.0x # Sequencing technology: Oxford Nanopore MinION; Illumina HiSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_020186115.1 # RefSeq assembly accession: GCF_020186115.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_020186225.1 GCF_020186225.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na WSYJ01000001.1 = NW_027150746.1 Primary Assembly 1375363 na contig_10 unplaced-scaffold na na WSYJ01000002.1 = NW_027150747.1 Primary Assembly 316846 na contig_101 unplaced-scaffold na na WSYJ01000003.1 = NW_027150748.1 Primary Assembly 46433 na contig_102 unplaced-scaffold na na WSYJ01000004.1 = NW_027150749.1 Primary Assembly 15498 na contig_104 unplaced-scaffold na na WSYJ01000005.1 = NW_027150750.1 Primary Assembly 429973 na contig_105 unplaced-scaffold na na WSYJ01000006.1 = NW_027150751.1 Primary Assembly 2945 na contig_106 unplaced-scaffold na na WSYJ01000007.1 = NW_027150752.1 Primary Assembly 16085 na contig_109 unplaced-scaffold na na WSYJ01000008.1 = NW_027150753.1 Primary Assembly 155329 na contig_11 unplaced-scaffold na na WSYJ01000009.1 = NW_027150754.1 Primary Assembly 557327 na contig_110 unplaced-scaffold na na WSYJ01000010.1 = NW_027150755.1 Primary Assembly 1724 na contig_111 unplaced-scaffold na na WSYJ01000011.1 = NW_027150756.1 Primary Assembly 263078 na contig_113 unplaced-scaffold na na WSYJ01000012.1 = NW_027150757.1 Primary Assembly 107915 na contig_118 unplaced-scaffold na na WSYJ01000013.1 = NW_027150758.1 Primary Assembly 771420 na contig_12 unplaced-scaffold na na WSYJ01000014.1 = NW_027150759.1 Primary Assembly 465037 na contig_120 unplaced-scaffold na na WSYJ01000015.1 = NW_027150760.1 Primary Assembly 196283 na contig_122 unplaced-scaffold na na WSYJ01000016.1 = NW_027150761.1 Primary Assembly 176711 na contig_123 unplaced-scaffold na na WSYJ01000017.1 = NW_027150762.1 Primary Assembly 234746 na contig_126 unplaced-scaffold na na WSYJ01000018.1 = NW_027150763.1 Primary Assembly 550 na contig_13 unplaced-scaffold na na WSYJ01000019.1 = NW_027150764.1 Primary Assembly 118557 na contig_130 unplaced-scaffold na na WSYJ01000020.1 = NW_027150765.1 Primary Assembly 151982 na contig_135 unplaced-scaffold na na WSYJ01000021.1 = NW_027150766.1 Primary Assembly 14000 na contig_136 unplaced-scaffold na na WSYJ01000022.1 = NW_027150767.1 Primary Assembly 28827 na contig_137 unplaced-scaffold na na WSYJ01000023.1 = NW_027150768.1 Primary Assembly 56403 na contig_138 unplaced-scaffold na na WSYJ01000024.1 = NW_027150769.1 Primary Assembly 621 na contig_14 unplaced-scaffold na na WSYJ01000025.1 = NW_027150770.1 Primary Assembly 580689 na contig_140 unplaced-scaffold na na WSYJ01000026.1 = NW_027150771.1 Primary Assembly 3347 na contig_142 unplaced-scaffold na na WSYJ01000027.1 = NW_027150772.1 Primary Assembly 74856 na contig_144 unplaced-scaffold na na WSYJ01000028.1 = NW_027150773.1 Primary Assembly 3770 na contig_145 unplaced-scaffold na na WSYJ01000029.1 = NW_027150774.1 Primary Assembly 230697 na contig_146 unplaced-scaffold na na WSYJ01000030.1 = NW_027150775.1 Primary Assembly 590249 na contig_147 unplaced-scaffold na na WSYJ01000031.1 = NW_027150776.1 Primary Assembly 18245 na contig_149 unplaced-scaffold na na WSYJ01000032.1 = NW_027150777.1 Primary Assembly 110034 na contig_15 unplaced-scaffold na na WSYJ01000033.1 = NW_027150778.1 Primary Assembly 481982 na contig_153 unplaced-scaffold na na WSYJ01000034.1 = NW_027150779.1 Primary Assembly 27860 na contig_158 unplaced-scaffold na na WSYJ01000035.1 = NW_027150780.1 Primary Assembly 10241 na contig_16 unplaced-scaffold na na WSYJ01000036.1 = NW_027150781.1 Primary Assembly 1371157 na contig_163 unplaced-scaffold na na WSYJ01000037.1 = NW_027150782.1 Primary Assembly 136621 na contig_165 unplaced-scaffold na na WSYJ01000038.1 = NW_027150783.1 Primary Assembly 23154 na contig_166 unplaced-scaffold na na WSYJ01000039.1 = NW_027150784.1 Primary Assembly 589 na contig_167 unplaced-scaffold na na WSYJ01000040.1 = NW_027150785.1 Primary Assembly 1097 na contig_17 unplaced-scaffold na na WSYJ01000041.1 = NW_027150786.1 Primary Assembly 1465 na contig_170 unplaced-scaffold na na WSYJ01000042.1 = NW_027150787.1 Primary Assembly 4362 na contig_171 unplaced-scaffold na na WSYJ01000043.1 = NW_027150788.1 Primary Assembly 1713 na contig_172 unplaced-scaffold na na WSYJ01000044.1 = NW_027150789.1 Primary Assembly 9065 na contig_173 unplaced-scaffold na na WSYJ01000045.1 = NW_027150790.1 Primary Assembly 89587 na contig_174 unplaced-scaffold na na WSYJ01000046.1 = NW_027150791.1 Primary Assembly 4433 na contig_175 unplaced-scaffold na na WSYJ01000047.1 = NW_027150792.1 Primary Assembly 4898 na contig_176 unplaced-scaffold na na WSYJ01000048.1 = NW_027150793.1 Primary Assembly 2712 na contig_177 unplaced-scaffold na na WSYJ01000049.1 = NW_027150794.1 Primary Assembly 129234 na contig_178 unplaced-scaffold na na WSYJ01000050.1 = NW_027150795.1 Primary Assembly 20739 na contig_179 unplaced-scaffold na na WSYJ01000051.1 = NW_027150796.1 Primary Assembly 1682 na contig_18 unplaced-scaffold na na WSYJ01000052.1 = NW_027150797.1 Primary Assembly 599717 na contig_180 unplaced-scaffold na na WSYJ01000053.1 = NW_027150798.1 Primary Assembly 535 na contig_182 unplaced-scaffold na na WSYJ01000054.1 = NW_027150799.1 Primary Assembly 123398 na contig_185 unplaced-scaffold na na WSYJ01000055.1 = NW_027150800.1 Primary Assembly 5570 na contig_187 unplaced-scaffold na na WSYJ01000056.1 = NW_027150801.1 Primary Assembly 3683 na contig_19 unplaced-scaffold na na WSYJ01000057.1 = NW_027150802.1 Primary Assembly 27736 na contig_197 unplaced-scaffold na na WSYJ01000058.1 = NW_027150803.1 Primary Assembly 566 na contig_199 unplaced-scaffold na na WSYJ01000059.1 = NW_027150804.1 Primary Assembly 186128 na contig_20 unplaced-scaffold na na WSYJ01000060.1 = NW_027150805.1 Primary Assembly 3085078 na contig_201 unplaced-scaffold na na WSYJ01000061.1 = NW_027150806.1 Primary Assembly 362 na contig_202 unplaced-scaffold na na WSYJ01000062.1 = NW_027150807.1 Primary Assembly 15577 na contig_204 unplaced-scaffold na na WSYJ01000063.1 = NW_027150808.1 Primary Assembly 333511 na contig_206 unplaced-scaffold na na WSYJ01000064.1 = NW_027150809.1 Primary Assembly 125421 na contig_207 unplaced-scaffold na na WSYJ01000065.1 = NW_027150810.1 Primary Assembly 2629 na contig_208 unplaced-scaffold na na WSYJ01000066.1 = NW_027150811.1 Primary Assembly 535 na contig_21 unplaced-scaffold na na WSYJ01000067.1 = NW_027150812.1 Primary Assembly 246468 na contig_215 unplaced-scaffold na na WSYJ01000068.1 = NW_027150813.1 Primary Assembly 13139 na contig_219 unplaced-scaffold na na WSYJ01000069.1 = NW_027150814.1 Primary Assembly 2632 na contig_220 unplaced-scaffold na na WSYJ01000070.1 = NW_027150815.1 Primary Assembly 688 na contig_221 unplaced-scaffold na na WSYJ01000071.1 = NW_027150816.1 Primary Assembly 57133 na contig_224 unplaced-scaffold na na WSYJ01000072.1 = NW_027150817.1 Primary Assembly 67192 na contig_225 unplaced-scaffold na na WSYJ01000073.1 = NW_027150818.1 Primary Assembly 1310 na contig_226 unplaced-scaffold na na WSYJ01000074.1 = NW_027150819.1 Primary Assembly 3678 na contig_23 unplaced-scaffold na na WSYJ01000075.1 = NW_027150820.1 Primary Assembly 974130 na contig_233 unplaced-scaffold na na WSYJ01000076.1 = NW_027150821.1 Primary Assembly 2189 na contig_234 unplaced-scaffold na na WSYJ01000077.1 = NW_027150822.1 Primary Assembly 4803 na contig_235 unplaced-scaffold na na WSYJ01000078.1 = NW_027150823.1 Primary Assembly 505 na contig_236 unplaced-scaffold na na WSYJ01000079.1 = NW_027150824.1 Primary Assembly 3010 na contig_237 unplaced-scaffold na na WSYJ01000080.1 = NW_027150825.1 Primary Assembly 17665 na contig_24 unplaced-scaffold na na WSYJ01000081.1 = NW_027150826.1 Primary Assembly 492735 na contig_241 unplaced-scaffold na na WSYJ01000082.1 = NW_027150827.1 Primary Assembly 16750 na contig_242 unplaced-scaffold na na WSYJ01000083.1 = NW_027150828.1 Primary Assembly 67095 na contig_244 unplaced-scaffold na na WSYJ01000084.1 = NW_027150829.1 Primary Assembly 3767 na contig_249 unplaced-scaffold na na WSYJ01000085.1 = NW_027150830.1 Primary Assembly 4633 na contig_25 unplaced-scaffold na na WSYJ01000086.1 = NW_027150831.1 Primary Assembly 628302 na contig_253 unplaced-scaffold na na WSYJ01000087.1 = NW_027150832.1 Primary Assembly 2633 na contig_254 unplaced-scaffold na na WSYJ01000088.1 = NW_027150833.1 Primary Assembly 2045 na contig_256 unplaced-scaffold na na WSYJ01000089.1 = NW_027150834.1 Primary Assembly 3786 na contig_257 unplaced-scaffold na na WSYJ01000090.1 = NW_027150835.1 Primary Assembly 38732 na contig_259 unplaced-scaffold na na WSYJ01000091.1 = NW_027150836.1 Primary Assembly 1165 na contig_26 unplaced-scaffold na na WSYJ01000092.1 = NW_027150837.1 Primary Assembly 929723 na contig_260 unplaced-scaffold na na WSYJ01000093.1 = NW_027150838.1 Primary Assembly 3018 na contig_262 unplaced-scaffold na na WSYJ01000094.1 = NW_027150839.1 Primary Assembly 818 na contig_263 unplaced-scaffold na na WSYJ01000095.1 = NW_027150840.1 Primary Assembly 554 na contig_264 unplaced-scaffold na na WSYJ01000096.1 = NW_027150841.1 Primary Assembly 1630 na contig_265 unplaced-scaffold na na WSYJ01000097.1 = NW_027150842.1 Primary Assembly 1934 na contig_269 unplaced-scaffold na na WSYJ01000098.1 = NW_027150843.1 Primary Assembly 23877 na contig_27 unplaced-scaffold na na WSYJ01000099.1 = NW_027150844.1 Primary Assembly 1052768 na contig_274 unplaced-scaffold na na WSYJ01000100.1 = NW_027150845.1 Primary Assembly 565 na contig_275 unplaced-scaffold na na WSYJ01000101.1 = NW_027150846.1 Primary Assembly 3036 na contig_278 unplaced-scaffold na na WSYJ01000102.1 = NW_027150847.1 Primary Assembly 923 na contig_279 unplaced-scaffold na na WSYJ01000103.1 = NW_027150848.1 Primary Assembly 21450 na contig_280 unplaced-scaffold na na WSYJ01000104.1 = NW_027150849.1 Primary Assembly 836 na contig_283 unplaced-scaffold na na WSYJ01000105.1 = NW_027150850.1 Primary Assembly 158474 na contig_285 unplaced-scaffold na na WSYJ01000106.1 = NW_027150851.1 Primary Assembly 12224 na contig_286 unplaced-scaffold na na WSYJ01000107.1 = NW_027150852.1 Primary Assembly 554 na contig_290 unplaced-scaffold na na WSYJ01000108.1 = NW_027150853.1 Primary Assembly 634 na contig_294 unplaced-scaffold na na WSYJ01000109.1 = NW_027150854.1 Primary Assembly 588 na contig_298 unplaced-scaffold na na WSYJ01000110.1 = NW_027150855.1 Primary Assembly 865 na contig_299 unplaced-scaffold na na WSYJ01000111.1 = NW_027150856.1 Primary Assembly 756 na contig_3 unplaced-scaffold na na WSYJ01000112.1 = NW_027150857.1 Primary Assembly 521 na contig_30 unplaced-scaffold na na WSYJ01000113.1 = NW_027150858.1 Primary Assembly 902640 na contig_303 unplaced-scaffold na na WSYJ01000114.1 = NW_027150859.1 Primary Assembly 4201 na contig_31 unplaced-scaffold na na WSYJ01000115.1 = NW_027150860.1 Primary Assembly 188506 na contig_313 unplaced-scaffold na na WSYJ01000116.1 = NW_027150861.1 Primary Assembly 766 na contig_319 unplaced-scaffold na na WSYJ01000117.1 = NW_027150862.1 Primary Assembly 3673 na contig_32 unplaced-scaffold na na WSYJ01000118.1 = NW_027150863.1 Primary Assembly 673467 na contig_320 unplaced-scaffold na na WSYJ01000119.1 = NW_027150864.1 Primary Assembly 83443 na contig_321 unplaced-scaffold na na WSYJ01000120.1 = NW_027150865.1 Primary Assembly 4379 na contig_325 unplaced-scaffold na na WSYJ01000121.1 = NW_027150866.1 Primary Assembly 521 na contig_326 unplaced-scaffold na na WSYJ01000122.1 = NW_027150867.1 Primary Assembly 30456 na contig_327 unplaced-scaffold na na WSYJ01000123.1 = NW_027150868.1 Primary Assembly 1927 na contig_328 unplaced-scaffold na na WSYJ01000124.1 = NW_027150869.1 Primary Assembly 628 na contig_33 unplaced-scaffold na na WSYJ01000125.1 = NW_027150870.1 Primary Assembly 536654 na contig_330 unplaced-scaffold na na WSYJ01000126.1 = NW_027150871.1 Primary Assembly 511 na contig_333 unplaced-scaffold na na WSYJ01000127.1 = NW_027150872.1 Primary Assembly 3969 na contig_335 unplaced-scaffold na na WSYJ01000128.1 = NW_027150873.1 Primary Assembly 1433 na contig_337 unplaced-scaffold na na WSYJ01000129.1 = NW_027150874.1 Primary Assembly 99498 na contig_34 unplaced-scaffold na na WSYJ01000130.1 = NW_027150875.1 Primary Assembly 341801 na contig_341 unplaced-scaffold na na WSYJ01000131.1 = NW_027150876.1 Primary Assembly 760 na contig_342 unplaced-scaffold na na WSYJ01000132.1 = NW_027150877.1 Primary Assembly 27388 na contig_35 unplaced-scaffold na na WSYJ01000133.1 = NW_027150878.1 Primary Assembly 262179 na contig_36 unplaced-scaffold na na WSYJ01000134.1 = NW_027150879.1 Primary Assembly 380899 na contig_37 unplaced-scaffold na na WSYJ01000135.1 = NW_027150880.1 Primary Assembly 210468 na contig_38 unplaced-scaffold na na WSYJ01000136.1 = NW_027150881.1 Primary Assembly 548 na contig_39 unplaced-scaffold na na WSYJ01000137.1 = NW_027150882.1 Primary Assembly 250899 na contig_4 unplaced-scaffold na na WSYJ01000138.1 = NW_027150883.1 Primary Assembly 984133 na contig_40 unplaced-scaffold na na WSYJ01000139.1 = NW_027150884.1 Primary Assembly 616573 na contig_41 unplaced-scaffold na na WSYJ01000140.1 = NW_027150885.1 Primary Assembly 394877 na contig_43 unplaced-scaffold na na WSYJ01000141.1 = NW_027150886.1 Primary Assembly 141574 na contig_44 unplaced-scaffold na na WSYJ01000142.1 = NW_027150887.1 Primary Assembly 1096267 na contig_45 unplaced-scaffold na na WSYJ01000143.1 = NW_027150888.1 Primary Assembly 180326 na contig_46 unplaced-scaffold na na WSYJ01000144.1 = NW_027150889.1 Primary Assembly 391392 na contig_47 unplaced-scaffold na na WSYJ01000145.1 = NW_027150890.1 Primary Assembly 25460 na contig_48 unplaced-scaffold na na WSYJ01000146.1 = NW_027150891.1 Primary Assembly 473053 na contig_5 unplaced-scaffold na na WSYJ01000147.1 = NW_027150892.1 Primary Assembly 346236 na contig_50 unplaced-scaffold na na WSYJ01000148.1 = NW_027150893.1 Primary Assembly 1924 na contig_51 unplaced-scaffold na na WSYJ01000149.1 = NW_027150894.1 Primary Assembly 1725435 na contig_52 unplaced-scaffold na na WSYJ01000150.1 = NW_027150895.1 Primary Assembly 123902 na contig_53 unplaced-scaffold na na WSYJ01000151.1 = NW_027150896.1 Primary Assembly 543532 na contig_54 unplaced-scaffold na na WSYJ01000152.1 = NW_027150897.1 Primary Assembly 179330 na contig_55 unplaced-scaffold na na WSYJ01000153.1 = NW_027150898.1 Primary Assembly 469307 na contig_56 unplaced-scaffold na na WSYJ01000154.1 = NW_027150899.1 Primary Assembly 172811 na contig_57 unplaced-scaffold na na WSYJ01000155.1 = NW_027150900.1 Primary Assembly 145266 na contig_59 unplaced-scaffold na na WSYJ01000156.1 = NW_027150901.1 Primary Assembly 383058 na contig_6 unplaced-scaffold na na WSYJ01000157.1 = NW_027150902.1 Primary Assembly 998801 na contig_60 unplaced-scaffold na na WSYJ01000158.1 = NW_027150903.1 Primary Assembly 374063 na contig_62 unplaced-scaffold na na WSYJ01000159.1 = NW_027150904.1 Primary Assembly 64204 na contig_63 unplaced-scaffold na na WSYJ01000160.1 = NW_027150905.1 Primary Assembly 156528 na contig_64 unplaced-scaffold na na WSYJ01000161.1 = NW_027150906.1 Primary Assembly 223873 na contig_65 unplaced-scaffold na na WSYJ01000162.1 = NW_027150907.1 Primary Assembly 73046 na contig_67 unplaced-scaffold na na WSYJ01000163.1 = NW_027150908.1 Primary Assembly 201077 na contig_68 unplaced-scaffold na na WSYJ01000164.1 = NW_027150909.1 Primary Assembly 1144546 na contig_69 unplaced-scaffold na na WSYJ01000165.1 = NW_027150910.1 Primary Assembly 10597 na contig_7 unplaced-scaffold na na WSYJ01000166.1 = NW_027150911.1 Primary Assembly 231282 na contig_70 unplaced-scaffold na na WSYJ01000167.1 = NW_027150912.1 Primary Assembly 519 na contig_71 unplaced-scaffold na na WSYJ01000168.1 = NW_027150913.1 Primary Assembly 17251 na contig_72 unplaced-scaffold na na WSYJ01000169.1 = NW_027150914.1 Primary Assembly 221339 na contig_76 unplaced-scaffold na na WSYJ01000170.1 = NW_027150915.1 Primary Assembly 41769 na contig_78 unplaced-scaffold na na WSYJ01000171.1 = NW_027150916.1 Primary Assembly 272082 na contig_79 unplaced-scaffold na na WSYJ01000172.1 = NW_027150917.1 Primary Assembly 54325 na contig_80 unplaced-scaffold na na WSYJ01000173.1 = NW_027150918.1 Primary Assembly 149518 na contig_82 unplaced-scaffold na na WSYJ01000174.1 = NW_027150919.1 Primary Assembly 437606 na contig_84 unplaced-scaffold na na WSYJ01000175.1 = NW_027150920.1 Primary Assembly 180193 na contig_86 unplaced-scaffold na na WSYJ01000176.1 = NW_027150921.1 Primary Assembly 244079 na contig_88 unplaced-scaffold na na WSYJ01000177.1 = NW_027150922.1 Primary Assembly 243429 na contig_9 unplaced-scaffold na na WSYJ01000178.1 = NW_027150923.1 Primary Assembly 1387830 na contig_91 unplaced-scaffold na na WSYJ01000179.1 = NW_027150924.1 Primary Assembly 87453 na contig_92 unplaced-scaffold na na WSYJ01000180.1 = NW_027150925.1 Primary Assembly 311365 na contig_94 unplaced-scaffold na na WSYJ01000181.1 = NW_027150926.1 Primary Assembly 29360 na contig_95 unplaced-scaffold na na WSYJ01000182.1 = NW_027150927.1 Primary Assembly 528423 na contig_97 unplaced-scaffold na na WSYJ01000183.1 = NW_027150928.1 Primary Assembly 167647 na scaffold_143 unplaced-scaffold na na WSYJ01000184.1 = NW_027150929.1 Primary Assembly 538305 na scaffold_168 unplaced-scaffold na na WSYJ01000185.1 = NW_027150930.1 Primary Assembly 165360 na scaffold_61 unplaced-scaffold na na WSYJ01000186.1 = NW_027150931.1 Primary Assembly 3384422 na scaffold_85 unplaced-scaffold na na WSYJ01000187.1 = NW_027150932.1 Primary Assembly 247936 na