# Assembly name: PR-102_v3_p # Organism name: Phytophthora ramorum (sudden oak death agent) # Isolate: Pr-102 # Taxid: 164328 # BioSample: SAMN19730089 # BioProject: PRJNA738483 # Submitter: USDA ARS # Date: 2021-11-08 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAICDV01 # Assembly method: HGAP v. 6.0; FALCON-Unzip v. 1.3.5; SSPACE-LongRead v. 1.1 # Expected final version: yes # Genome coverage: 340x # Sequencing technology: PacBio Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_020800215.1 # RefSeq assembly accession: GCF_020800215.1 # RefSeq assembly and GenBank assemblies identical: yes # Linked assembly: GCA_020800225.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_020800245.1 GCF_020800245.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Phyram_PR-102_s0001 unplaced-scaffold na na JAICDV010000001.1 = NW_027150647.1 Primary Assembly 6138019 na Phyram_PR-102_s0002 unplaced-scaffold na na JAICDV010000002.1 = NW_027150648.1 Primary Assembly 6091812 na Phyram_PR-102_s0003 unplaced-scaffold na na JAICDV010000003.1 = NW_027150649.1 Primary Assembly 5711059 na Phyram_PR-102_s0004 unplaced-scaffold na na JAICDV010000004.1 = NW_027150650.1 Primary Assembly 3983224 na Phyram_PR-102_s0005 unplaced-scaffold na na JAICDV010000005.1 = NW_027150651.1 Primary Assembly 3640760 na Phyram_PR-102_s0006 unplaced-scaffold na na JAICDV010000006.1 = NW_027150652.1 Primary Assembly 3611744 na Phyram_PR-102_s0007 unplaced-scaffold na na JAICDV010000007.1 = NW_027150653.1 Primary Assembly 3417926 na Phyram_PR-102_s0008 unplaced-scaffold na na JAICDV010000008.1 = NW_027150654.1 Primary Assembly 2758070 na Phyram_PR-102_s0009 unplaced-scaffold na na JAICDV010000009.1 = NW_027150655.1 Primary Assembly 2348472 na Phyram_PR-102_s0010 unplaced-scaffold na na JAICDV010000010.1 = NW_027150656.1 Primary Assembly 1867096 na Phyram_PR-102_s0011 unplaced-scaffold na na JAICDV010000011.1 = NW_027150657.1 Primary Assembly 1835490 na Phyram_PR-102_s0012 unplaced-scaffold na na JAICDV010000012.1 = NW_027150658.1 Primary Assembly 1794100 na Phyram_PR-102_s0013 unplaced-scaffold na na JAICDV010000013.1 = NW_027150659.1 Primary Assembly 1590066 na Phyram_PR-102_s0014 unplaced-scaffold na na JAICDV010000014.1 = NW_027150660.1 Primary Assembly 1571386 na Phyram_PR-102_s0015 unplaced-scaffold na na JAICDV010000015.1 = NW_027150661.1 Primary Assembly 1517156 na Phyram_PR-102_s0016 unplaced-scaffold na na JAICDV010000016.1 = NW_027150662.1 Primary Assembly 1510265 na Phyram_PR-102_s0017 unplaced-scaffold na na JAICDV010000017.1 = NW_027150663.1 Primary Assembly 1306317 na Phyram_PR-102_s0018 unplaced-scaffold na na JAICDV010000018.1 = NW_027150664.1 Primary Assembly 1156066 na Phyram_PR-102_s0019 unplaced-scaffold na na JAICDV010000019.1 = NW_027150665.1 Primary Assembly 1103409 na Phyram_PR-102_s0020 unplaced-scaffold na na JAICDV010000020.1 = NW_027150666.1 Primary Assembly 1001731 na Phyram_PR-102_s0021 unplaced-scaffold na na JAICDV010000021.1 = NW_027150667.1 Primary Assembly 885506 na Phyram_PR-102_s0022 unplaced-scaffold na na JAICDV010000022.1 = NW_027150668.1 Primary Assembly 754378 na Phyram_PR-102_s0023 unplaced-scaffold na na JAICDV010000023.1 = NW_027150669.1 Primary Assembly 531327 na Phyram_PR-102_s0024 unplaced-scaffold na na JAICDV010000024.1 = NW_027150670.1 Primary Assembly 437263 na Phyram_PR-102_s0025 unplaced-scaffold na na JAICDV010000025.1 = NW_027150671.1 Primary Assembly 352630 na Phyram_PR-102_s0026 unplaced-scaffold na na JAICDV010000026.1 = NW_027150672.1 Primary Assembly 268187 na Phyram_PR-102_s0027 unplaced-scaffold na na JAICDV010000027.1 = NW_027150673.1 Primary Assembly 165354 na Phyram_PR-102_s0028 unplaced-scaffold na na JAICDV010000028.1 = NW_027150674.1 Primary Assembly 102579 na