# Assembly name: ASM2080023v1 # Organism name: Phytophthora ramorum (sudden oak death agent) # Infraspecific name: strain=14567 # Isolate: PR-15-019 # Taxid: 164328 # BioSample: SAMN19730093 # BioProject: PRJNA738482 # Submitter: USDA ARS # Date: 2021-11-08 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAICDX01 # Assembly method: HGAP v. 6.0; FALCON-Unzip v. 1.3.5; SSPACE-LongRead v. 1.1 # Expected final version: yes # Genome coverage: 180x # Sequencing technology: PacBio Sequel # GenBank assembly accession: GCA_020800235.1 # Linked assembly: GCA_020800205.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_020800255.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Phyram_PR-15-019_s0001 unplaced-scaffold na na JAICDX010000001.1 <> na Primary Assembly 6567752 na Phyram_PR-15-019_s0002 unplaced-scaffold na na JAICDX010000002.1 <> na Primary Assembly 6057366 na Phyram_PR-15-019_s0003 unplaced-scaffold na na JAICDX010000003.1 <> na Primary Assembly 4333950 na Phyram_PR-15-019_s0004 unplaced-scaffold na na JAICDX010000004.1 <> na Primary Assembly 4162616 na Phyram_PR-15-019_s0005 unplaced-scaffold na na JAICDX010000005.1 <> na Primary Assembly 3931334 na Phyram_PR-15-019_s0006 unplaced-scaffold na na JAICDX010000006.1 <> na Primary Assembly 3551731 na Phyram_PR-15-019_s0007 unplaced-scaffold na na JAICDX010000007.1 <> na Primary Assembly 3522112 na Phyram_PR-15-019_s0008 unplaced-scaffold na na JAICDX010000008.1 <> na Primary Assembly 3198274 na Phyram_PR-15-019_s0009 unplaced-scaffold na na JAICDX010000009.1 <> na Primary Assembly 2316815 na Phyram_PR-15-019_s0010 unplaced-scaffold na na JAICDX010000010.1 <> na Primary Assembly 2040519 na Phyram_PR-15-019_s0011 unplaced-scaffold na na JAICDX010000011.1 <> na Primary Assembly 1929414 na Phyram_PR-15-019_s0012 unplaced-scaffold na na JAICDX010000012.1 <> na Primary Assembly 1715018 na Phyram_PR-15-019_s0013 unplaced-scaffold na na JAICDX010000013.1 <> na Primary Assembly 1623515 na Phyram_PR-15-019_s0014 unplaced-scaffold na na JAICDX010000014.1 <> na Primary Assembly 1592244 na Phyram_PR-15-019_s0015 unplaced-scaffold na na JAICDX010000015.1 <> na Primary Assembly 1535232 na Phyram_PR-15-019_s0016 unplaced-scaffold na na JAICDX010000016.1 <> na Primary Assembly 1395947 na Phyram_PR-15-019_s0017 unplaced-scaffold na na JAICDX010000017.1 <> na Primary Assembly 1383884 na Phyram_PR-15-019_s0018 unplaced-scaffold na na JAICDX010000018.1 <> na Primary Assembly 1359772 na Phyram_PR-15-019_s0019 unplaced-scaffold na na JAICDX010000019.1 <> na Primary Assembly 1019186 na Phyram_PR-15-019_s0020 unplaced-scaffold na na JAICDX010000020.1 <> na Primary Assembly 940403 na Phyram_PR-15-019_s0021 unplaced-scaffold na na JAICDX010000021.1 <> na Primary Assembly 908685 na Phyram_PR-15-019_s0022 unplaced-scaffold na na JAICDX010000022.1 <> na Primary Assembly 900606 na Phyram_PR-15-019_s0023 unplaced-scaffold na na JAICDX010000023.1 <> na Primary Assembly 603071 na Phyram_PR-15-019_s0024 unplaced-scaffold na na JAICDX010000024.1 <> na Primary Assembly 268449 na Phyram_PR-15-019_s0025 unplaced-scaffold na na JAICDX010000025.1 <> na Primary Assembly 262965 na Phyram_PR-15-019_s0026 unplaced-scaffold na na JAICDX010000026.1 <> na Primary Assembly 253090 na Phyram_PR-15-019_s0027 unplaced-scaffold na na JAICDX010000027.1 <> na Primary Assembly 126847 na