# Assembly name: BRLI_1.1 # Organism name: Branchinecta lindahli (crustaceans) # Isolate: BRLI_1 # Sex: female # Taxid: 91573 # BioSample: SAMN26264342 # BioProject: PRJNA811226 # Submitter: UCLA # Date: 2022-04-19 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAKZAO01 # Assembly method: ipa v. 1.3.1; Phase Genomics Proximo HiC Scaffolding v. OCT-2021 # Expected final version: yes # Genome coverage: 37.4x # Sequencing technology: PacBio Sequel II; Proximo HiC; Illumina NovaSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_023053555.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023053585.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name PGA_scaffold10__22_contigs__length_30254016 unplaced-scaffold na na JAKZAO010000011.1 <> na Primary Assembly 30254016 na PGA_scaffold11__11_contigs__length_29511623 unplaced-scaffold na na JAKZAO010000012.1 <> na Primary Assembly 29511623 na PGA_scaffold12__5_contigs__length_21756168 unplaced-scaffold na na JAKZAO010000013.1 <> na Primary Assembly 21756168 na PGA_scaffold13__7_contigs__length_17659014 unplaced-scaffold na na JAKZAO010000001.1 <> na Primary Assembly 17659014 na PGA_scaffold14__6_contigs__length_20363878 unplaced-scaffold na na JAKZAO010000014.1 <> na Primary Assembly 20363878 na PGA_scaffold15__18_contigs__length_2110432 unplaced-scaffold na na JAKZAO010000015.1 <> na Primary Assembly 2110432 na PGA_scaffold1__13_contigs__length_34454145 unplaced-scaffold na na JAKZAO010000002.1 <> na Primary Assembly 34454145 na PGA_scaffold2__8_contigs__length_30687427 unplaced-scaffold na na JAKZAO010000003.1 <> na Primary Assembly 30687427 na PGA_scaffold3__15_contigs__length_29112420 unplaced-scaffold na na JAKZAO010000004.1 <> na Primary Assembly 29112420 na PGA_scaffold4__11_contigs__length_23984158 unplaced-scaffold na na JAKZAO010000005.1 <> na Primary Assembly 23984158 na PGA_scaffold5__13_contigs__length_28831505 unplaced-scaffold na na JAKZAO010000006.1 <> na Primary Assembly 28831505 na PGA_scaffold6__8_contigs__length_20709862 unplaced-scaffold na na JAKZAO010000007.1 <> na Primary Assembly 20709862 na PGA_scaffold7__11_contigs__length_25202299 unplaced-scaffold na na JAKZAO010000008.1 <> na Primary Assembly 25202299 na PGA_scaffold8__19_contigs__length_33463936 unplaced-scaffold na na JAKZAO010000009.1 <> na Primary Assembly 33463936 na PGA_scaffold9__23_contigs__length_31456452 unplaced-scaffold na na JAKZAO010000010.1 <> na Primary Assembly 31456452 na ctg.000000F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000016.1 <> na Primary Assembly 50000 na ctg.000000F___fragment_4___debris__unscaffolded unplaced-scaffold na na JAKZAO010000017.1 <> na Primary Assembly 125000 na ctg.000005F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000018.1 <> na Primary Assembly 250000 na ctg.000009F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000019.1 <> na Primary Assembly 500000 na ctg.000018F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000020.1 <> na Primary Assembly 125000 na ctg.000023F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000021.1 <> na Primary Assembly 50000 na ctg.000023F___fragment_3__unscaffolded unplaced-scaffold na na JAKZAO010000022.1 <> na Primary Assembly 105791 na ctg.000025F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000023.1 <> na Primary Assembly 125077 na ctg.000026F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000024.1 <> na Primary Assembly 125000 na ctg.000041F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000025.1 <> na Primary Assembly 250000 na ctg.000048F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000026.1 <> na Primary Assembly 50000 na ctg.000052F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000027.1 <> na Primary Assembly 50000 na ctg.000067F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000028.1 <> na Primary Assembly 125000 na ctg.000067F___fragment_4___debris__unscaffolded unplaced-scaffold na na JAKZAO010000029.1 <> na Primary Assembly 125000 na ctg.000076F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000030.1 <> na Primary Assembly 125000 na ctg.000080F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000031.1 <> na Primary Assembly 125000 na ctg.000088F___fragment_1__unscaffolded unplaced-scaffold na na JAKZAO010000032.1 <> na Primary Assembly 81706 na ctg.000088F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000033.1 <> na Primary Assembly 25077 na ctg.000119F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000034.1 <> na Primary Assembly 50077 na ctg.000151F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000035.1 <> na Primary Assembly 250000 na ctg.000238F__unscaffolded unplaced-scaffold na na JAKZAO010000036.1 <> na Primary Assembly 63021 na ctg.000243F__unscaffolded unplaced-scaffold na na JAKZAO010000037.1 <> na Primary Assembly 329066 na ctg.000246F___fragment_2___debris__unscaffolded unplaced-scaffold na na JAKZAO010000038.1 <> na Primary Assembly 125000 na ctg.000246F___fragment_3__unscaffolded unplaced-scaffold na na JAKZAO010000039.1 <> na Primary Assembly 333856 na ctg.000246F___fragment_4___debris__unscaffolded unplaced-scaffold na na JAKZAO010000040.1 <> na Primary Assembly 50000 na ctg.000327F__unscaffolded unplaced-scaffold na na JAKZAO010000041.1 <> na Primary Assembly 174200 na ctg.000361F__unscaffolded unplaced-scaffold na na JAKZAO010000042.1 <> na Primary Assembly 256263 na ctg.000368F__unscaffolded unplaced-scaffold na na JAKZAO010000043.1 <> na Primary Assembly 302993 na ctg.000403F__unscaffolded unplaced-scaffold na na JAKZAO010000044.1 <> na Primary Assembly 194882 na ctg.000405F__unscaffolded unplaced-scaffold na na JAKZAO010000045.1 <> na Primary Assembly 20267 na ctg.000432F__unscaffolded unplaced-scaffold na na JAKZAO010000046.1 <> na Primary Assembly 139958 na ctg.000488F__unscaffolded unplaced-scaffold na na JAKZAO010000047.1 <> na Primary Assembly 86681 na ctg.000494F__unscaffolded unplaced-scaffold na na JAKZAO010000048.1 <> na Primary Assembly 80340 na ctg.000518F__unscaffolded unplaced-scaffold na na JAKZAO010000049.1 <> na Primary Assembly 75689 na ctg.000533F__unscaffolded unplaced-scaffold na na JAKZAO010000050.1 <> na Primary Assembly 67190 na ctg.000548F__unscaffolded unplaced-scaffold na na JAKZAO010000051.1 <> na Primary Assembly 60712 na ctg.000553F__unscaffolded unplaced-scaffold na na JAKZAO010000052.1 <> na Primary Assembly 61513 na ctg.000573F__unscaffolded unplaced-scaffold na na JAKZAO010000053.1 <> na Primary Assembly 53489 na ctg.000582F__unscaffolded unplaced-scaffold na na JAKZAO010000054.1 <> na Primary Assembly 62994 na ctg.000640F__unscaffolded unplaced-scaffold na na JAKZAO010000055.1 <> na Primary Assembly 29527 na