# Assembly name: fCliAna1.0.a # Organism name: Clinocottus analis (woolly sculpin) # Isolate: CAN_PGR_092001 # Taxid: 304258 # BioSample: SAMN26368113 # BioProject: PRJNA819175 # Submitter: UCLA # Date: 2022-04-19 # Assembly type: alternate-pseudohaplotype # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JALGQM01 # Assembly method: HiFiasm v. 0.16.1-r375; SALSA2 v. 2 # Expected final version: yes # Genome coverage: 30x # Sequencing technology: PacBio Sequel II; Dovetail's OmniC; Illumina NovaSeq # GenBank assembly accession: GCA_023055415.1 # Linked assembly: GCA_023055335.1 (principal pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023055475.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SCAF_1 unplaced-scaffold na na JALGQM010000001.1 <> na Primary Assembly 28184607 na SCAF_10 unplaced-scaffold na na JALGQM010000010.1 <> na Primary Assembly 22099926 na SCAF_100 unplaced-scaffold na na JALGQM010000100.1 <> na Primary Assembly 54951 na SCAF_101 unplaced-scaffold na na JALGQM010000101.1 <> na Primary Assembly 54604 na SCAF_102 unplaced-scaffold na na JALGQM010000102.1 <> na Primary Assembly 53125 na SCAF_103 unplaced-scaffold na na JALGQM010000103.1 <> na Primary Assembly 53057 na SCAF_104 unplaced-scaffold na na JALGQM010000104.1 <> na Primary Assembly 51943 na SCAF_105 unplaced-scaffold na na JALGQM010000105.1 <> na Primary Assembly 46644 na SCAF_106 unplaced-scaffold na na JALGQM010000106.1 <> na Primary Assembly 46472 na SCAF_107 unplaced-scaffold na na JALGQM010000107.1 <> na Primary Assembly 46235 na SCAF_108 unplaced-scaffold na na JALGQM010000108.1 <> na Primary Assembly 45658 na SCAF_109 unplaced-scaffold na na JALGQM010000109.1 <> na Primary Assembly 45469 na SCAF_11 unplaced-scaffold na na JALGQM010000011.1 <> na Primary Assembly 21109456 na SCAF_110 unplaced-scaffold na na JALGQM010000110.1 <> na Primary Assembly 42038 na SCAF_111 unplaced-scaffold na na JALGQM010000111.1 <> na Primary Assembly 42001 na SCAF_112 unplaced-scaffold na na JALGQM010000112.1 <> na Primary Assembly 40622 na SCAF_113 unplaced-scaffold na na JALGQM010000113.1 <> na Primary Assembly 40510 na SCAF_114 unplaced-scaffold na na JALGQM010000114.1 <> na Primary Assembly 39268 na SCAF_115 unplaced-scaffold na na JALGQM010000115.1 <> na Primary Assembly 38683 na SCAF_116 unplaced-scaffold na na JALGQM010000116.1 <> na Primary Assembly 38075 na SCAF_117 unplaced-scaffold na na JALGQM010000117.1 <> na Primary Assembly 37605 na SCAF_118 unplaced-scaffold na na JALGQM010000118.1 <> na Primary Assembly 37037 na SCAF_119 unplaced-scaffold na na JALGQM010000119.1 <> na Primary Assembly 36164 na SCAF_12 unplaced-scaffold na na JALGQM010000012.1 <> na Primary Assembly 20474872 na SCAF_120 unplaced-scaffold na na JALGQM010000120.1 <> na Primary Assembly 32651 na SCAF_121 unplaced-scaffold na na JALGQM010000121.1 <> na Primary Assembly 32507 na SCAF_122 unplaced-scaffold na na JALGQM010000122.1 <> na Primary Assembly 30722 na SCAF_123 unplaced-scaffold na na JALGQM010000123.1 <> na Primary Assembly 30253 na SCAF_124 unplaced-scaffold na na JALGQM010000124.1 <> na Primary Assembly 30073 na SCAF_125 unplaced-scaffold na na JALGQM010000125.1 <> na Primary Assembly 29799 na SCAF_126 unplaced-scaffold na na JALGQM010000126.1 <> na Primary Assembly 29407 na SCAF_127 unplaced-scaffold na na JALGQM010000127.1 <> na Primary Assembly 28830 na SCAF_128 unplaced-scaffold na na JALGQM010000128.1 <> na Primary Assembly 26766 na SCAF_129 unplaced-scaffold na na JALGQM010000129.1 <> na Primary Assembly 26679 na SCAF_13 unplaced-scaffold na na JALGQM010000013.1 <> na Primary Assembly 20257528 na SCAF_130 unplaced-scaffold na na JALGQM010000130.1 <> na Primary Assembly 24768 na SCAF_131 unplaced-scaffold na na JALGQM010000131.1 <> na Primary Assembly 24514 na SCAF_132 unplaced-scaffold na na JALGQM010000132.1 <> na Primary Assembly 23065 na SCAF_133 unplaced-scaffold na na JALGQM010000133.1 <> na Primary Assembly 23002 na SCAF_134 unplaced-scaffold na na JALGQM010000134.1 <> na Primary Assembly 22972 na SCAF_135 unplaced-scaffold na na JALGQM010000135.1 <> na Primary Assembly 22304 na SCAF_136 unplaced-scaffold na na JALGQM010000136.1 <> na Primary Assembly 22291 na SCAF_137 unplaced-scaffold na na JALGQM010000137.1 <> na Primary Assembly 22119 na SCAF_138 unplaced-scaffold na na JALGQM010000138.1 <> na Primary Assembly 21814 na SCAF_139 unplaced-scaffold na na JALGQM010000139.1 <> na Primary Assembly 21757 na SCAF_14 unplaced-scaffold na na JALGQM010000014.1 <> na Primary Assembly 19395682 na SCAF_140 unplaced-scaffold na na JALGQM010000140.1 <> na Primary Assembly 21620 na SCAF_141 unplaced-scaffold na na JALGQM010000141.1 <> na Primary Assembly 21324 na SCAF_142 unplaced-scaffold na na JALGQM010000142.1 <> na Primary Assembly 21265 na SCAF_143 unplaced-scaffold na na JALGQM010000143.1 <> na Primary Assembly 21254 na SCAF_144 unplaced-scaffold na na JALGQM010000144.1 <> na Primary Assembly 21018 na SCAF_145 unplaced-scaffold na na JALGQM010000145.1 <> na Primary Assembly 20676 na SCAF_146 unplaced-scaffold na na JALGQM010000146.1 <> na Primary Assembly 20653 na SCAF_147 unplaced-scaffold na na JALGQM010000147.1 <> na Primary Assembly 20615 na SCAF_148 unplaced-scaffold na na JALGQM010000148.1 <> na Primary Assembly 20498 na SCAF_149 unplaced-scaffold na na JALGQM010000149.1 <> na Primary Assembly 20472 na SCAF_15 unplaced-scaffold na na JALGQM010000015.1 <> na Primary Assembly 19303495 na SCAF_150 unplaced-scaffold na na JALGQM010000150.1 <> na Primary Assembly 20062 na SCAF_151 unplaced-scaffold na na JALGQM010000151.1 <> na Primary Assembly 19414 na SCAF_152 unplaced-scaffold na na JALGQM010000152.1 <> na Primary Assembly 19243 na SCAF_153 unplaced-scaffold na na JALGQM010000153.1 <> na Primary Assembly 18810 na SCAF_154 unplaced-scaffold na na JALGQM010000154.1 <> na Primary Assembly 18013 na SCAF_155 unplaced-scaffold na na JALGQM010000155.1 <> na Primary Assembly 17977 na SCAF_156 unplaced-scaffold na na JALGQM010000156.1 <> na Primary Assembly 17940 na SCAF_157 unplaced-scaffold na na JALGQM010000157.1 <> na Primary Assembly 17811 na SCAF_158 unplaced-scaffold na na JALGQM010000158.1 <> na Primary Assembly 17710 na SCAF_159 unplaced-scaffold na na JALGQM010000159.1 <> na Primary Assembly 17097 na SCAF_16 unplaced-scaffold na na JALGQM010000016.1 <> na Primary Assembly 19009086 na SCAF_160 unplaced-scaffold na na JALGQM010000160.1 <> na Primary Assembly 16228 na SCAF_161 unplaced-scaffold na na JALGQM010000161.1 <> na Primary Assembly 16032 na SCAF_162 unplaced-scaffold na na JALGQM010000162.1 <> na Primary Assembly 15882 na SCAF_163 unplaced-scaffold na na JALGQM010000163.1 <> na Primary Assembly 15478 na SCAF_164 unplaced-scaffold na na JALGQM010000164.1 <> na Primary Assembly 14917 na SCAF_165 unplaced-scaffold na na JALGQM010000165.1 <> na Primary Assembly 14838 na SCAF_166 unplaced-scaffold na na JALGQM010000166.1 <> na Primary Assembly 14400 na SCAF_167 unplaced-scaffold na na JALGQM010000167.1 <> na Primary Assembly 13493 na SCAF_168 unplaced-scaffold na na JALGQM010000168.1 <> na Primary Assembly 12947 na SCAF_169 unplaced-scaffold na na JALGQM010000169.1 <> na Primary Assembly 12649 na SCAF_17 unplaced-scaffold na na JALGQM010000017.1 <> na Primary Assembly 18702414 na SCAF_170 unplaced-scaffold na na JALGQM010000170.1 <> na Primary Assembly 12086 na SCAF_171 unplaced-scaffold na na JALGQM010000171.1 <> na Primary Assembly 11883 na SCAF_18 unplaced-scaffold na na JALGQM010000018.1 <> na Primary Assembly 18670078 na SCAF_19 unplaced-scaffold na na JALGQM010000019.1 <> na Primary Assembly 18545837 na SCAF_2 unplaced-scaffold na na JALGQM010000002.1 <> na Primary Assembly 24345594 na SCAF_20 unplaced-scaffold na na JALGQM010000020.1 <> na Primary Assembly 17746541 na SCAF_21 unplaced-scaffold na na JALGQM010000021.1 <> na Primary Assembly 14714010 na SCAF_22 unplaced-scaffold na na JALGQM010000022.1 <> na Primary Assembly 14593600 na SCAF_23 unplaced-scaffold na na JALGQM010000023.1 <> na Primary Assembly 12371057 na SCAF_24 unplaced-scaffold na na JALGQM010000024.1 <> na Primary Assembly 10758815 na SCAF_25 unplaced-scaffold na na JALGQM010000025.1 <> na Primary Assembly 5539525 na SCAF_26 unplaced-scaffold na na JALGQM010000026.1 <> na Primary Assembly 2887614 na SCAF_27 unplaced-scaffold na na JALGQM010000027.1 <> na Primary Assembly 2541944 na SCAF_28 unplaced-scaffold na na JALGQM010000028.1 <> na Primary Assembly 2493995 na SCAF_29 unplaced-scaffold na na JALGQM010000029.1 <> na Primary Assembly 1959349 na SCAF_3 unplaced-scaffold na na JALGQM010000003.1 <> na Primary Assembly 24149700 na SCAF_30 unplaced-scaffold na na JALGQM010000030.1 <> na Primary Assembly 1739134 na SCAF_31 unplaced-scaffold na na JALGQM010000031.1 <> na Primary Assembly 1658258 na SCAF_32 unplaced-scaffold na na JALGQM010000032.1 <> na Primary Assembly 1605770 na SCAF_33 unplaced-scaffold na na JALGQM010000033.1 <> na Primary Assembly 1440935 na SCAF_34 unplaced-scaffold na na JALGQM010000034.1 <> na Primary Assembly 1381681 na SCAF_35 unplaced-scaffold na na JALGQM010000035.1 <> na Primary Assembly 1344386 na SCAF_36 unplaced-scaffold na na JALGQM010000036.1 <> na Primary Assembly 1310377 na SCAF_37 unplaced-scaffold na na JALGQM010000037.1 <> na Primary Assembly 1259589 na SCAF_38 unplaced-scaffold na na JALGQM010000038.1 <> na Primary Assembly 1194156 na SCAF_39 unplaced-scaffold na na JALGQM010000039.1 <> na Primary Assembly 1156708 na SCAF_4 unplaced-scaffold na na JALGQM010000004.1 <> na Primary Assembly 24148520 na SCAF_40 unplaced-scaffold na na JALGQM010000040.1 <> na Primary Assembly 1071617 na SCAF_41 unplaced-scaffold na na JALGQM010000041.1 <> na Primary Assembly 1011169 na SCAF_42 unplaced-scaffold na na JALGQM010000042.1 <> na Primary Assembly 954773 na SCAF_43 unplaced-scaffold na na JALGQM010000043.1 <> na Primary Assembly 872820 na SCAF_44 unplaced-scaffold na na JALGQM010000044.1 <> na Primary Assembly 818576 na SCAF_45 unplaced-scaffold na na JALGQM010000045.1 <> na Primary Assembly 784503 na SCAF_46 unplaced-scaffold na na JALGQM010000046.1 <> na Primary Assembly 746994 na SCAF_47 unplaced-scaffold na na JALGQM010000047.1 <> na Primary Assembly 715555 na SCAF_48 unplaced-scaffold na na JALGQM010000048.1 <> na Primary Assembly 698410 na SCAF_49 unplaced-scaffold na na JALGQM010000049.1 <> na Primary Assembly 687471 na SCAF_5 unplaced-scaffold na na JALGQM010000005.1 <> na Primary Assembly 23859629 na SCAF_50 unplaced-scaffold na na JALGQM010000050.1 <> na Primary Assembly 659458 na SCAF_51 unplaced-scaffold na na JALGQM010000051.1 <> na Primary Assembly 658114 na SCAF_52 unplaced-scaffold na na JALGQM010000052.1 <> na Primary Assembly 645899 na SCAF_53 unplaced-scaffold na na JALGQM010000053.1 <> na Primary Assembly 633963 na SCAF_54 unplaced-scaffold na na JALGQM010000054.1 <> na Primary Assembly 616419 na SCAF_55 unplaced-scaffold na na JALGQM010000055.1 <> na Primary Assembly 613717 na SCAF_56 unplaced-scaffold na na JALGQM010000056.1 <> na Primary Assembly 564405 na SCAF_57 unplaced-scaffold na na JALGQM010000057.1 <> na Primary Assembly 524947 na SCAF_58 unplaced-scaffold na na JALGQM010000058.1 <> na Primary Assembly 488798 na SCAF_59 unplaced-scaffold na na JALGQM010000059.1 <> na Primary Assembly 470781 na SCAF_6 unplaced-scaffold na na JALGQM010000006.1 <> na Primary Assembly 22918119 na SCAF_60 unplaced-scaffold na na JALGQM010000060.1 <> na Primary Assembly 387852 na SCAF_61 unplaced-scaffold na na JALGQM010000061.1 <> na Primary Assembly 319905 na SCAF_62 unplaced-scaffold na na JALGQM010000062.1 <> na Primary Assembly 286920 na SCAF_63 unplaced-scaffold na na JALGQM010000063.1 <> na Primary Assembly 270395 na SCAF_64 unplaced-scaffold na na JALGQM010000064.1 <> na Primary Assembly 270208 na SCAF_65 unplaced-scaffold na na JALGQM010000065.1 <> na Primary Assembly 245732 na SCAF_66 unplaced-scaffold na na JALGQM010000066.1 <> na Primary Assembly 238248 na SCAF_67 unplaced-scaffold na na JALGQM010000067.1 <> na Primary Assembly 233091 na SCAF_68 unplaced-scaffold na na JALGQM010000068.1 <> na Primary Assembly 232530 na SCAF_69 unplaced-scaffold na na JALGQM010000069.1 <> na Primary Assembly 213011 na SCAF_7 unplaced-scaffold na na JALGQM010000007.1 <> na Primary Assembly 22805373 na SCAF_70 unplaced-scaffold na na JALGQM010000070.1 <> na Primary Assembly 192509 na SCAF_71 unplaced-scaffold na na JALGQM010000071.1 <> na Primary Assembly 184503 na SCAF_72 unplaced-scaffold na na JALGQM010000072.1 <> na Primary Assembly 165109 na SCAF_73 unplaced-scaffold na na JALGQM010000073.1 <> na Primary Assembly 164182 na SCAF_74 unplaced-scaffold na na JALGQM010000074.1 <> na Primary Assembly 137118 na SCAF_75 unplaced-scaffold na na JALGQM010000075.1 <> na Primary Assembly 130529 na SCAF_76 unplaced-scaffold na na JALGQM010000076.1 <> na Primary Assembly 127451 na SCAF_77 unplaced-scaffold na na JALGQM010000077.1 <> na Primary Assembly 126534 na SCAF_78 unplaced-scaffold na na JALGQM010000078.1 <> na Primary Assembly 124372 na SCAF_79 unplaced-scaffold na na JALGQM010000079.1 <> na Primary Assembly 123913 na SCAF_8 unplaced-scaffold na na JALGQM010000008.1 <> na Primary Assembly 22796889 na SCAF_80 unplaced-scaffold na na JALGQM010000080.1 <> na Primary Assembly 114512 na SCAF_81 unplaced-scaffold na na JALGQM010000081.1 <> na Primary Assembly 96660 na SCAF_82 unplaced-scaffold na na JALGQM010000082.1 <> na Primary Assembly 93939 na SCAF_83 unplaced-scaffold na na JALGQM010000083.1 <> na Primary Assembly 92096 na SCAF_84 unplaced-scaffold na na JALGQM010000084.1 <> na Primary Assembly 91652 na SCAF_85 unplaced-scaffold na na JALGQM010000085.1 <> na Primary Assembly 88032 na SCAF_86 unplaced-scaffold na na JALGQM010000086.1 <> na Primary Assembly 82895 na SCAF_87 unplaced-scaffold na na JALGQM010000087.1 <> na Primary Assembly 82594 na SCAF_88 unplaced-scaffold na na JALGQM010000088.1 <> na Primary Assembly 77604 na SCAF_89 unplaced-scaffold na na JALGQM010000089.1 <> na Primary Assembly 74587 na SCAF_9 unplaced-scaffold na na JALGQM010000009.1 <> na Primary Assembly 22482506 na SCAF_90 unplaced-scaffold na na JALGQM010000090.1 <> na Primary Assembly 73536 na SCAF_91 unplaced-scaffold na na JALGQM010000091.1 <> na Primary Assembly 72582 na SCAF_92 unplaced-scaffold na na JALGQM010000092.1 <> na Primary Assembly 71726 na SCAF_93 unplaced-scaffold na na JALGQM010000093.1 <> na Primary Assembly 71471 na SCAF_94 unplaced-scaffold na na JALGQM010000094.1 <> na Primary Assembly 71253 na SCAF_95 unplaced-scaffold na na JALGQM010000095.1 <> na Primary Assembly 70763 na SCAF_96 unplaced-scaffold na na JALGQM010000096.1 <> na Primary Assembly 56723 na SCAF_97 unplaced-scaffold na na JALGQM010000097.1 <> na Primary Assembly 56025 na SCAF_98 unplaced-scaffold na na JALGQM010000098.1 <> na Primary Assembly 55688 na SCAF_99 unplaced-scaffold na na JALGQM010000099.1 <> na Primary Assembly 55646 na