# Assembly name: rAspTig1.1.pri # Organism name: Aspidoscelis tigris stejnegeri (lizards & snakes) # Isolate: HBS 135688 # Sex: male # Taxid: 2917703 # BioSample: SAMN25872408 # BioProject: PRJNA810478 # Submitter: UCLA # Date: 2025-03-05 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JALMGA02 # Assembly method: HiFiasm v. 0.16.1-r375; purge_dups v. 1.2.6; SALSA2 v. 2 # Expected final version: no # Genome coverage: 51.0x # Sequencing technology: PacBio Sequel IIe HiFi; Dovetail Omni-C; Illumina NovaSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_023333525.2 # Linked assembly: GCA_023333555.2 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023333535.2 Primary Assembly ## GCA_023333545.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM107880.1 <> na Primary Assembly 296624713 na SUPER_2 assembled-molecule 2 Chromosome CM107881.1 <> na Primary Assembly 211556095 na SUPER_3 assembled-molecule 3 Chromosome CM107882.1 <> na Primary Assembly 179774429 na SUPER_4 assembled-molecule 4 Chromosome CM107883.1 <> na Primary Assembly 119429162 na SUPER_5 assembled-molecule 5 Chromosome CM107884.1 <> na Primary Assembly 115489130 na SUPER_6 assembled-molecule 6 Chromosome CM107885.1 <> na Primary Assembly 111642246 na SUPER_7 assembled-molecule 7 Chromosome CM107886.1 <> na Primary Assembly 96574794 na SUPER_8 assembled-molecule 8 Chromosome CM107887.1 <> na Primary Assembly 90851677 na SUPER_9 assembled-molecule 9 Chromosome CM107888.1 <> na Primary Assembly 83123799 na SUPER_10 assembled-molecule 10 Chromosome CM107889.1 <> na Primary Assembly 75284242 na SUPER_11 assembled-molecule 11 Chromosome CM107890.1 <> na Primary Assembly 63539824 na SUPER_12 assembled-molecule 12 Chromosome CM107891.1 <> na Primary Assembly 30792851 na SUPER_13 assembled-molecule 13 Chromosome CM107892.1 <> na Primary Assembly 26527366 na SUPER_14 assembled-molecule 14 Chromosome CM107893.1 <> na Primary Assembly 25665218 na SUPER_15 assembled-molecule 15 Chromosome CM107894.1 <> na Primary Assembly 25338539 na SUPER_16 assembled-molecule 16 Chromosome CM107895.1 <> na Primary Assembly 21754720 na SUPER_17 assembled-molecule 17 Chromosome CM107896.1 <> na Primary Assembly 19036591 na SUPER_18 assembled-molecule 18 Chromosome CM107897.1 <> na Primary Assembly 14907447 na SUPER_19 assembled-molecule 19 Chromosome CM107898.1 <> na Primary Assembly 12815172 na SUPER_20 assembled-molecule 20 Chromosome CM107899.1 <> na Primary Assembly 12276132 na SUPER_21 assembled-molecule 21 Chromosome CM107900.1 <> na Primary Assembly 10834773 na SUPER_22 assembled-molecule 22 Chromosome CM107901.1 <> na Primary Assembly 7751865 na SUPER_23 assembled-molecule 23 Chromosome CM107902.1 <> na Primary Assembly 6960076 na SUPER_2_unloc_1 unlocalized-scaffold 2 Chromosome JALMGA020000026.1 <> na Primary Assembly 613729 na SUPER_2_unloc_4 unlocalized-scaffold 2 Chromosome JALMGA020000039.1 <> na Primary Assembly 306864 na SUPER_2_unloc_5 unlocalized-scaffold 2 Chromosome JALMGA020000042.1 <> na Primary Assembly 255720 na SUPER_2_unloc_6 unlocalized-scaffold 2 Chromosome JALMGA020000043.1 <> na Primary Assembly 255720 na SUPER_2_unloc_3 unlocalized-scaffold 2 Chromosome JALMGA020000048.1 <> na Primary Assembly 153432 na SUPER_2_unloc_2 unlocalized-scaffold 2 Chromosome JALMGA020000049.1 <> na Primary Assembly 153432 na SUPER_2_unloc_7 unlocalized-scaffold 2 Chromosome JALMGA020000063.1 <> na Primary Assembly 77614 na SUPER_2_unloc_9 unlocalized-scaffold 2 Chromosome JALMGA020000064.1 <> na Primary Assembly 76616 na SUPER_2_unloc_8 unlocalized-scaffold 2 Chromosome JALMGA020000065.1 <> na Primary Assembly 75591 na SUPER_4_unloc_2 unlocalized-scaffold 4 Chromosome JALMGA020000025.1 <> na Primary Assembly 655484 na SUPER_4_unloc_3 unlocalized-scaffold 4 Chromosome JALMGA020000031.1 <> na Primary Assembly 413218 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JALMGA020000040.1 <> na Primary Assembly 302341 na SUPER_7_unloc_1 unlocalized-scaffold 7 Chromosome JALMGA020000034.1 <> na Primary Assembly 384545 na SUPER_9_unloc_1 unlocalized-scaffold 9 Chromosome JALMGA020000033.1 <> na Primary Assembly 389559 na SUPER_19_unloc_1 unlocalized-scaffold 19 Chromosome JALMGA020000045.1 <> na Primary Assembly 184537 na SUPER_21_unloc_1 unlocalized-scaffold 21 Chromosome JALMGA020000054.1 <> na Primary Assembly 118788 na SUPER_21_unloc_2 unlocalized-scaffold 21 Chromosome JALMGA020000066.1 <> na Primary Assembly 73565 na Scaffold_24 unplaced-scaffold na na JALMGA020000027.1 <> na Primary Assembly 529460 na Scaffold_25 unplaced-scaffold na na JALMGA020000028.1 <> na Primary Assembly 473773 na Scaffold_26 unplaced-scaffold na na JALMGA020000029.1 <> na Primary Assembly 465046 na Scaffold_27 unplaced-scaffold na na JALMGA020000030.1 <> na Primary Assembly 442692 na Scaffold_28 unplaced-scaffold na na JALMGA020000032.1 <> na Primary Assembly 406004 na Scaffold_29 unplaced-scaffold na na JALMGA020000035.1 <> na Primary Assembly 377351 na Scaffold_30 unplaced-scaffold na na JALMGA020000036.1 <> na Primary Assembly 351230 na Scaffold_31 unplaced-scaffold na na JALMGA020000037.1 <> na Primary Assembly 339302 na Scaffold_32 unplaced-scaffold na na JALMGA020000038.1 <> na Primary Assembly 333659 na Scaffold_33 unplaced-scaffold na na JALMGA020000041.1 <> na Primary Assembly 277165 na Scaffold_34 unplaced-scaffold na na JALMGA020000044.1 <> na Primary Assembly 221469 na Scaffold_35 unplaced-scaffold na na JALMGA020000046.1 <> na Primary Assembly 178093 na Scaffold_36 unplaced-scaffold na na JALMGA020000047.1 <> na Primary Assembly 162716 na Scaffold_37 unplaced-scaffold na na JALMGA020000050.1 <> na Primary Assembly 145195 na Scaffold_38 unplaced-scaffold na na JALMGA020000051.1 <> na Primary Assembly 144081 na Scaffold_39 unplaced-scaffold na na JALMGA020000052.1 <> na Primary Assembly 134450 na Scaffold_40 unplaced-scaffold na na JALMGA020000053.1 <> na Primary Assembly 130688 na Scaffold_41 unplaced-scaffold na na JALMGA020000055.1 <> na Primary Assembly 115475 na Scaffold_42 unplaced-scaffold na na JALMGA020000056.1 <> na Primary Assembly 109354 na Scaffold_43 unplaced-scaffold na na JALMGA020000057.1 <> na Primary Assembly 104953 na Scaffold_44 unplaced-scaffold na na JALMGA020000058.1 <> na Primary Assembly 99610 na Scaffold_45 unplaced-scaffold na na JALMGA020000059.1 <> na Primary Assembly 95924 na Scaffold_46 unplaced-scaffold na na JALMGA020000060.1 <> na Primary Assembly 91733 na Scaffold_47 unplaced-scaffold na na JALMGA020000061.1 <> na Primary Assembly 86890 na Scaffold_48 unplaced-scaffold na na JALMGA020000062.1 <> na Primary Assembly 85574 na Scaffold_49 unplaced-scaffold na na JALMGA020000067.1 <> na Primary Assembly 73395 na Scaffold_50 unplaced-scaffold na na JALMGA020000068.1 <> na Primary Assembly 73015 na Scaffold_51 unplaced-scaffold na na JALMGA020000069.1 <> na Primary Assembly 72512 na Scaffold_52 unplaced-scaffold na na JALMGA020000070.1 <> na Primary Assembly 72173 na Scaffold_53 unplaced-scaffold na na JALMGA020000071.1 <> na Primary Assembly 71828 na Scaffold_54 unplaced-scaffold na na JALMGA020000072.1 <> na Primary Assembly 71086 na Scaffold_55 unplaced-scaffold na na JALMGA020000073.1 <> na Primary Assembly 68867 na Scaffold_56 unplaced-scaffold na na JALMGA020000074.1 <> na Primary Assembly 67953 na Scaffold_57 unplaced-scaffold na na JALMGA020000075.1 <> na Primary Assembly 66284 na Scaffold_58 unplaced-scaffold na na JALMGA020000076.1 <> na Primary Assembly 61882 na Scaffold_59 unplaced-scaffold na na JALMGA020000077.1 <> na Primary Assembly 60813 na Scaffold_60 unplaced-scaffold na na JALMGA020000078.1 <> na Primary Assembly 60134 na Scaffold_61 unplaced-scaffold na na JALMGA020000079.1 <> na Primary Assembly 59900 na Scaffold_62 unplaced-scaffold na na JALMGA020000080.1 <> na Primary Assembly 59233 na Scaffold_63 unplaced-scaffold na na JALMGA020000081.1 <> na Primary Assembly 57700 na Scaffold_64 unplaced-scaffold na na JALMGA020000082.1 <> na Primary Assembly 57309 na Scaffold_65 unplaced-scaffold na na JALMGA020000083.1 <> na Primary Assembly 56512 na Scaffold_66 unplaced-scaffold na na JALMGA020000084.1 <> na Primary Assembly 51415 na Scaffold_67 unplaced-scaffold na na JALMGA020000085.1 <> na Primary Assembly 50518 na Scaffold_68 unplaced-scaffold na na JALMGA020000086.1 <> na Primary Assembly 48855 na Scaffold_69 unplaced-scaffold na na JALMGA020000087.1 <> na Primary Assembly 47358 na Scaffold_70 unplaced-scaffold na na JALMGA020000088.1 <> na Primary Assembly 46257 na Scaffold_71 unplaced-scaffold na na JALMGA020000089.1 <> na Primary Assembly 45210 na Scaffold_72 unplaced-scaffold na na JALMGA020000090.1 <> na Primary Assembly 44353 na Scaffold_73 unplaced-scaffold na na JALMGA020000091.1 <> na Primary Assembly 44111 na Scaffold_74 unplaced-scaffold na na JALMGA020000092.1 <> na Primary Assembly 43095 na Scaffold_75 unplaced-scaffold na na JALMGA020000093.1 <> na Primary Assembly 43004 na Scaffold_76 unplaced-scaffold na na JALMGA020000094.1 <> na Primary Assembly 41974 na Scaffold_77 unplaced-scaffold na na JALMGA020000095.1 <> na Primary Assembly 41686 na Scaffold_78 unplaced-scaffold na na JALMGA020000096.1 <> na Primary Assembly 41228 na Scaffold_79 unplaced-scaffold na na JALMGA020000097.1 <> na Primary Assembly 41122 na Scaffold_80 unplaced-scaffold na na JALMGA020000098.1 <> na Primary Assembly 41122 na Scaffold_81 unplaced-scaffold na na JALMGA020000099.1 <> na Primary Assembly 40546 na Scaffold_82 unplaced-scaffold na na JALMGA020000100.1 <> na Primary Assembly 40546 na Scaffold_83 unplaced-scaffold na na JALMGA020000101.1 <> na Primary Assembly 40385 na Scaffold_84 unplaced-scaffold na na JALMGA020000102.1 <> na Primary Assembly 40331 na Scaffold_85 unplaced-scaffold na na JALMGA020000103.1 <> na Primary Assembly 40309 na Scaffold_86 unplaced-scaffold na na JALMGA020000104.1 <> na Primary Assembly 40142 na Scaffold_87 unplaced-scaffold na na JALMGA020000105.1 <> na Primary Assembly 39081 na Scaffold_88 unplaced-scaffold na na JALMGA020000106.1 <> na Primary Assembly 38865 na Scaffold_89 unplaced-scaffold na na JALMGA020000107.1 <> na Primary Assembly 38551 na Scaffold_90 unplaced-scaffold na na JALMGA020000108.1 <> na Primary Assembly 38258 na Scaffold_91 unplaced-scaffold na na JALMGA020000109.1 <> na Primary Assembly 38084 na Scaffold_92 unplaced-scaffold na na JALMGA020000110.1 <> na Primary Assembly 38049 na Scaffold_93 unplaced-scaffold na na JALMGA020000111.1 <> na Primary Assembly 37498 na Scaffold_94 unplaced-scaffold na na JALMGA020000112.1 <> na Primary Assembly 36710 na Scaffold_95 unplaced-scaffold na na JALMGA020000113.1 <> na Primary Assembly 36384 na Scaffold_96 unplaced-scaffold na na JALMGA020000114.1 <> na Primary Assembly 35993 na Scaffold_97 unplaced-scaffold na na JALMGA020000115.1 <> na Primary Assembly 35363 na Scaffold_98 unplaced-scaffold na na JALMGA020000116.1 <> na Primary Assembly 35352 na Scaffold_99 unplaced-scaffold na na JALMGA020000117.1 <> na Primary Assembly 35319 na Scaffold_100 unplaced-scaffold na na JALMGA020000118.1 <> na Primary Assembly 35296 na Scaffold_101 unplaced-scaffold na na JALMGA020000119.1 <> na Primary Assembly 34896 na Scaffold_102 unplaced-scaffold na na JALMGA020000120.1 <> na Primary Assembly 34821 na Scaffold_103 unplaced-scaffold na na JALMGA020000121.1 <> na Primary Assembly 34621 na Scaffold_104 unplaced-scaffold na na JALMGA020000122.1 <> na Primary Assembly 34388 na Scaffold_105 unplaced-scaffold na na JALMGA020000123.1 <> na Primary Assembly 34325 na Scaffold_106 unplaced-scaffold na na JALMGA020000124.1 <> na Primary Assembly 32977 na Scaffold_107 unplaced-scaffold na na JALMGA020000125.1 <> na Primary Assembly 32970 na Scaffold_108 unplaced-scaffold na na JALMGA020000126.1 <> na Primary Assembly 31761 na Scaffold_109 unplaced-scaffold na na JALMGA020000127.1 <> na Primary Assembly 30865 na Scaffold_110 unplaced-scaffold na na JALMGA020000128.1 <> na Primary Assembly 30315 na Scaffold_111 unplaced-scaffold na na JALMGA020000129.1 <> na Primary Assembly 30115 na Scaffold_112 unplaced-scaffold na na JALMGA020000130.1 <> na Primary Assembly 29743 na Scaffold_113 unplaced-scaffold na na JALMGA020000131.1 <> na Primary Assembly 29603 na Scaffold_114 unplaced-scaffold na na JALMGA020000132.1 <> na Primary Assembly 29131 na Scaffold_115 unplaced-scaffold na na JALMGA020000133.1 <> na Primary Assembly 28711 na Scaffold_116 unplaced-scaffold na na JALMGA020000134.1 <> na Primary Assembly 28457 na Scaffold_117 unplaced-scaffold na na JALMGA020000135.1 <> na Primary Assembly 28312 na Scaffold_118 unplaced-scaffold na na JALMGA020000136.1 <> na Primary Assembly 28063 na Scaffold_119 unplaced-scaffold na na JALMGA020000137.1 <> na Primary Assembly 28040 na Scaffold_120 unplaced-scaffold na na JALMGA020000138.1 <> na Primary Assembly 27760 na Scaffold_121 unplaced-scaffold na na JALMGA020000139.1 <> na Primary Assembly 27640 na Scaffold_122 unplaced-scaffold na na JALMGA020000140.1 <> na Primary Assembly 27018 na Scaffold_123 unplaced-scaffold na na JALMGA020000141.1 <> na Primary Assembly 27017 na Scaffold_124 unplaced-scaffold na na JALMGA020000142.1 <> na Primary Assembly 26882 na Scaffold_125 unplaced-scaffold na na JALMGA020000143.1 <> na Primary Assembly 26794 na Scaffold_126 unplaced-scaffold na na JALMGA020000144.1 <> na Primary Assembly 26559 na Scaffold_127 unplaced-scaffold na na JALMGA020000145.1 <> na Primary Assembly 26557 na Scaffold_128 unplaced-scaffold na na JALMGA020000146.1 <> na Primary Assembly 24944 na Scaffold_129 unplaced-scaffold na na JALMGA020000147.1 <> na Primary Assembly 24439 na Scaffold_130 unplaced-scaffold na na JALMGA020000148.1 <> na Primary Assembly 24129 na Scaffold_131 unplaced-scaffold na na JALMGA020000149.1 <> na Primary Assembly 24066 na Scaffold_132 unplaced-scaffold na na JALMGA020000150.1 <> na Primary Assembly 23193 na Scaffold_133 unplaced-scaffold na na JALMGA020000151.1 <> na Primary Assembly 22670 na Scaffold_134 unplaced-scaffold na na JALMGA020000152.1 <> na Primary Assembly 22663 na Scaffold_135 unplaced-scaffold na na JALMGA020000153.1 <> na Primary Assembly 22449 na Scaffold_136 unplaced-scaffold na na JALMGA020000154.1 <> na Primary Assembly 22088 na Scaffold_137 unplaced-scaffold na na JALMGA020000155.1 <> na Primary Assembly 21915 na Scaffold_138 unplaced-scaffold na na JALMGA020000156.1 <> na Primary Assembly 21684 na Scaffold_139 unplaced-scaffold na na JALMGA020000157.1 <> na Primary Assembly 21628 na Scaffold_140 unplaced-scaffold na na JALMGA020000158.1 <> na Primary Assembly 21401 na Scaffold_141 unplaced-scaffold na na JALMGA020000159.1 <> na Primary Assembly 21280 na Scaffold_142 unplaced-scaffold na na JALMGA020000160.1 <> na Primary Assembly 21142 na Scaffold_143 unplaced-scaffold na na JALMGA020000161.1 <> na Primary Assembly 21052 na Scaffold_144 unplaced-scaffold na na JALMGA020000162.1 <> na Primary Assembly 20978 na Scaffold_145 unplaced-scaffold na na JALMGA020000163.1 <> na Primary Assembly 20463 na Scaffold_146 unplaced-scaffold na na JALMGA020000164.1 <> na Primary Assembly 20449 na Scaffold_147 unplaced-scaffold na na JALMGA020000165.1 <> na Primary Assembly 19970 na Scaffold_148 unplaced-scaffold na na JALMGA020000166.1 <> na Primary Assembly 19956 na Scaffold_149 unplaced-scaffold na na JALMGA020000167.1 <> na Primary Assembly 19902 na Scaffold_150 unplaced-scaffold na na JALMGA020000168.1 <> na Primary Assembly 19559 na Scaffold_151 unplaced-scaffold na na JALMGA020000169.1 <> na Primary Assembly 19537 na Scaffold_152 unplaced-scaffold na na JALMGA020000170.1 <> na Primary Assembly 19412 na Scaffold_153 unplaced-scaffold na na JALMGA020000171.1 <> na Primary Assembly 19245 na Scaffold_154 unplaced-scaffold na na JALMGA020000172.1 <> na Primary Assembly 19118 na Scaffold_155 unplaced-scaffold na na JALMGA020000173.1 <> na Primary Assembly 18843 na Scaffold_156 unplaced-scaffold na na JALMGA020000174.1 <> na Primary Assembly 18765 na Scaffold_157 unplaced-scaffold na na JALMGA020000175.1 <> na Primary Assembly 18255 na Scaffold_158 unplaced-scaffold na na JALMGA020000176.1 <> na Primary Assembly 18245 na Scaffold_159 unplaced-scaffold na na JALMGA020000177.1 <> na Primary Assembly 17110 na Scaffold_160 unplaced-scaffold na na JALMGA020000178.1 <> na Primary Assembly 16741 na Scaffold_161 unplaced-scaffold na na JALMGA020000179.1 <> na Primary Assembly 16567 na Scaffold_162 unplaced-scaffold na na JALMGA020000180.1 <> na Primary Assembly 15822 na Scaffold_163 unplaced-scaffold na na JALMGA020000181.1 <> na Primary Assembly 15304 na Scaffold_164 unplaced-scaffold na na JALMGA020000182.1 <> na Primary Assembly 14817 na Scaffold_165 unplaced-scaffold na na JALMGA020000183.1 <> na Primary Assembly 13908 na Scaffold_166 unplaced-scaffold na na JALMGA020000184.1 <> na Primary Assembly 13663 na Scaffold_167 unplaced-scaffold na na JALMGA020000185.1 <> na Primary Assembly 13529 na Scaffold_168 unplaced-scaffold na na JALMGA020000186.1 <> na Primary Assembly 12363 na MT assembled-molecule MT Mitochondrion CM041363.1 <> na non-nuclear 17692 na