# Assembly name: SA_Gpal_Newton # Organism name: Globodera pallida (nematodes) # Isolate: Newton # Taxid: 36090 # BioSample: SAMN17925167 # BioProject: PRJNA702104 # Submitter: University of St Andrews # Date: 2022-05-12 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAGDFN01 # Assembly method: wtdbg2 v. 2.1 # Expected final version: yes # Genome coverage: 200.0x # Sequencing technology: PacBio Sequel; Illumina HiSeq # GenBank assembly accession: GCA_023343765.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023344015.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Gpscaff_1 unplaced-scaffold na na JAGDFN010000001.1 <> na Primary Assembly 8303752 na Gpscaff_10 unplaced-scaffold na na JAGDFN010000092.1 <> na Primary Assembly 2890277 na Gpscaff_100 unplaced-scaffold na na JAGDFN010000137.1 <> na Primary Assembly 126659 na Gpscaff_101 unplaced-scaffold na na JAGDFN010000051.1 <> na Primary Assembly 125703 na Gpscaff_102 unplaced-scaffold na na JAGDFN010000138.1 <> na Primary Assembly 124436 na Gpscaff_103 unplaced-scaffold na na JAGDFN010000052.1 <> na Primary Assembly 116967 na Gpscaff_104 unplaced-scaffold na na JAGDFN010000139.1 <> na Primary Assembly 111886 na Gpscaff_105 unplaced-scaffold na na JAGDFN010000053.1 <> na Primary Assembly 111848 na Gpscaff_106 unplaced-scaffold na na JAGDFN010000140.1 <> na Primary Assembly 95699 na Gpscaff_107 unplaced-scaffold na na JAGDFN010000054.1 <> na Primary Assembly 91954 na Gpscaff_108 unplaced-scaffold na na JAGDFN010000141.1 <> na Primary Assembly 91299 na Gpscaff_109 unplaced-scaffold na na JAGDFN010000055.1 <> na Primary Assembly 81337 na Gpscaff_11 unplaced-scaffold na na JAGDFN010000006.1 <> na Primary Assembly 2530068 na Gpscaff_110 unplaced-scaffold na na JAGDFN010000142.1 <> na Primary Assembly 79709 na Gpscaff_111 unplaced-scaffold na na JAGDFN010000056.1 <> na Primary Assembly 77334 na Gpscaff_112 unplaced-scaffold na na JAGDFN010000143.1 <> na Primary Assembly 77285 na Gpscaff_113 unplaced-scaffold na na JAGDFN010000057.1 <> na Primary Assembly 72279 na Gpscaff_114 unplaced-scaffold na na JAGDFN010000144.1 <> na Primary Assembly 71646 na Gpscaff_115 unplaced-scaffold na na JAGDFN010000058.1 <> na Primary Assembly 63006 na Gpscaff_116 unplaced-scaffold na na JAGDFN010000145.1 <> na Primary Assembly 61212 na Gpscaff_117 unplaced-scaffold na na JAGDFN010000059.1 <> na Primary Assembly 56218 na Gpscaff_118 unplaced-scaffold na na JAGDFN010000146.1 <> na Primary Assembly 55255 na Gpscaff_119 unplaced-scaffold na na JAGDFN010000060.1 <> na Primary Assembly 52457 na Gpscaff_12 unplaced-scaffold na na JAGDFN010000093.1 <> na Primary Assembly 2422040 na Gpscaff_120 unplaced-scaffold na na JAGDFN010000147.1 <> na Primary Assembly 47905 na Gpscaff_121 unplaced-scaffold na na JAGDFN010000061.1 <> na Primary Assembly 44802 na Gpscaff_122 unplaced-scaffold na na JAGDFN010000148.1 <> na Primary Assembly 44408 na Gpscaff_123 unplaced-scaffold na na JAGDFN010000062.1 <> na Primary Assembly 43906 na Gpscaff_124 unplaced-scaffold na na JAGDFN010000149.1 <> na Primary Assembly 42850 na Gpscaff_125 unplaced-scaffold na na JAGDFN010000063.1 <> na Primary Assembly 42368 na Gpscaff_126 unplaced-scaffold na na JAGDFN010000150.1 <> na Primary Assembly 41876 na Gpscaff_127 unplaced-scaffold na na JAGDFN010000064.1 <> na Primary Assembly 40794 na Gpscaff_128 unplaced-scaffold na na JAGDFN010000151.1 <> na Primary Assembly 36712 na Gpscaff_129 unplaced-scaffold na na JAGDFN010000065.1 <> na Primary Assembly 33902 na Gpscaff_13 unplaced-scaffold na na JAGDFN010000007.1 <> na Primary Assembly 2350201 na Gpscaff_130 unplaced-scaffold na na JAGDFN010000152.1 <> na Primary Assembly 33521 na Gpscaff_131 unplaced-scaffold na na JAGDFN010000066.1 <> na Primary Assembly 33035 na Gpscaff_132 unplaced-scaffold na na JAGDFN010000153.1 <> na Primary Assembly 30854 na Gpscaff_133 unplaced-scaffold na na JAGDFN010000067.1 <> na Primary Assembly 29195 na Gpscaff_134 unplaced-scaffold na na JAGDFN010000154.1 <> na Primary Assembly 28815 na Gpscaff_135 unplaced-scaffold na na JAGDFN010000068.1 <> na Primary Assembly 26737 na Gpscaff_136 unplaced-scaffold na na JAGDFN010000155.1 <> na Primary Assembly 26241 na Gpscaff_137 unplaced-scaffold na na JAGDFN010000069.1 <> na Primary Assembly 26163 na Gpscaff_138 unplaced-scaffold na na JAGDFN010000156.1 <> na Primary Assembly 25735 na Gpscaff_139 unplaced-scaffold na na JAGDFN010000070.1 <> na Primary Assembly 22936 na Gpscaff_14 unplaced-scaffold na na JAGDFN010000094.1 <> na Primary Assembly 2225126 na Gpscaff_140 unplaced-scaffold na na JAGDFN010000157.1 <> na Primary Assembly 20358 na Gpscaff_141 unplaced-scaffold na na JAGDFN010000071.1 <> na Primary Assembly 18814 na Gpscaff_142 unplaced-scaffold na na JAGDFN010000158.1 <> na Primary Assembly 18410 na Gpscaff_143 unplaced-scaffold na na JAGDFN010000072.1 <> na Primary Assembly 16691 na Gpscaff_144 unplaced-scaffold na na JAGDFN010000159.1 <> na Primary Assembly 16427 na Gpscaff_145 unplaced-scaffold na na JAGDFN010000073.1 <> na Primary Assembly 16105 na Gpscaff_146 unplaced-scaffold na na JAGDFN010000160.1 <> na Primary Assembly 15877 na Gpscaff_147 unplaced-scaffold na na JAGDFN010000074.1 <> na Primary Assembly 15471 na Gpscaff_148 unplaced-scaffold na na JAGDFN010000161.1 <> na Primary Assembly 15163 na Gpscaff_149 unplaced-scaffold na na JAGDFN010000075.1 <> na Primary Assembly 15161 na Gpscaff_15 unplaced-scaffold na na JAGDFN010000008.1 <> na Primary Assembly 2061787 na Gpscaff_150 unplaced-scaffold na na JAGDFN010000162.1 <> na Primary Assembly 14734 na Gpscaff_151 unplaced-scaffold na na JAGDFN010000076.1 <> na Primary Assembly 14509 na Gpscaff_152 unplaced-scaffold na na JAGDFN010000163.1 <> na Primary Assembly 14478 na Gpscaff_153 unplaced-scaffold na na JAGDFN010000077.1 <> na Primary Assembly 13352 na Gpscaff_154 unplaced-scaffold na na JAGDFN010000164.1 <> na Primary Assembly 11941 na Gpscaff_155 unplaced-scaffold na na JAGDFN010000078.1 <> na Primary Assembly 11494 na Gpscaff_156 unplaced-scaffold na na JAGDFN010000165.1 <> na Primary Assembly 10466 na Gpscaff_157 unplaced-scaffold na na JAGDFN010000079.1 <> na Primary Assembly 10251 na Gpscaff_158 unplaced-scaffold na na JAGDFN010000166.1 <> na Primary Assembly 9735 na Gpscaff_159 unplaced-scaffold na na JAGDFN010000080.1 <> na Primary Assembly 9695 na Gpscaff_16 unplaced-scaffold na na JAGDFN010000095.1 <> na Primary Assembly 2048538 na Gpscaff_160 unplaced-scaffold na na JAGDFN010000167.1 <> na Primary Assembly 9306 na Gpscaff_161 unplaced-scaffold na na JAGDFN010000081.1 <> na Primary Assembly 8270 na Gpscaff_162 unplaced-scaffold na na JAGDFN010000168.1 <> na Primary Assembly 8172 na Gpscaff_163 unplaced-scaffold na na JAGDFN010000082.1 <> na Primary Assembly 7386 na Gpscaff_164 unplaced-scaffold na na JAGDFN010000169.1 <> na Primary Assembly 7217 na Gpscaff_165 unplaced-scaffold na na JAGDFN010000083.1 <> na Primary Assembly 7186 na Gpscaff_166 unplaced-scaffold na na JAGDFN010000170.1 <> na Primary Assembly 6951 na Gpscaff_167 unplaced-scaffold na na JAGDFN010000084.1 <> na Primary Assembly 6178 na Gpscaff_168 unplaced-scaffold na na JAGDFN010000171.1 <> na Primary Assembly 5961 na Gpscaff_169 unplaced-scaffold na na JAGDFN010000085.1 <> na Primary Assembly 5478 na Gpscaff_17 unplaced-scaffold na na JAGDFN010000009.1 <> na Primary Assembly 2024128 na Gpscaff_170 unplaced-scaffold na na JAGDFN010000172.1 <> na Primary Assembly 5446 na Gpscaff_171 unplaced-scaffold na na JAGDFN010000086.1 <> na Primary Assembly 5359 na Gpscaff_172 unplaced-scaffold na na JAGDFN010000173.1 <> na Primary Assembly 5132 na Gpscaff_173 unplaced-scaffold na na JAGDFN010000087.1 <> na Primary Assembly 812 na Gpscaff_18 unplaced-scaffold na na JAGDFN010000096.1 <> na Primary Assembly 1922241 na Gpscaff_19 unplaced-scaffold na na JAGDFN010000010.1 <> na Primary Assembly 1808269 na Gpscaff_2 unplaced-scaffold na na JAGDFN010000088.1 <> na Primary Assembly 7611253 na Gpscaff_20 unplaced-scaffold na na JAGDFN010000097.1 <> na Primary Assembly 1726601 na Gpscaff_21 unplaced-scaffold na na JAGDFN010000011.1 <> na Primary Assembly 1701747 na Gpscaff_22 unplaced-scaffold na na JAGDFN010000098.1 <> na Primary Assembly 1665301 na Gpscaff_23 unplaced-scaffold na na JAGDFN010000012.1 <> na Primary Assembly 1538904 na Gpscaff_24 unplaced-scaffold na na JAGDFN010000099.1 <> na Primary Assembly 1485865 na Gpscaff_25 unplaced-scaffold na na JAGDFN010000013.1 <> na Primary Assembly 1371836 na Gpscaff_26 unplaced-scaffold na na JAGDFN010000100.1 <> na Primary Assembly 1365963 na Gpscaff_27 unplaced-scaffold na na JAGDFN010000014.1 <> na Primary Assembly 1329250 na Gpscaff_28 unplaced-scaffold na na JAGDFN010000101.1 <> na Primary Assembly 1274728 na Gpscaff_29 unplaced-scaffold na na JAGDFN010000015.1 <> na Primary Assembly 1227497 na Gpscaff_3 unplaced-scaffold na na JAGDFN010000002.1 <> na Primary Assembly 7252729 na Gpscaff_30 unplaced-scaffold na na JAGDFN010000102.1 <> na Primary Assembly 1225279 na Gpscaff_31 unplaced-scaffold na na JAGDFN010000016.1 <> na Primary Assembly 1176010 na Gpscaff_32 unplaced-scaffold na na JAGDFN010000103.1 <> na Primary Assembly 1065807 na Gpscaff_33 unplaced-scaffold na na JAGDFN010000017.1 <> na Primary Assembly 1061341 na Gpscaff_34 unplaced-scaffold na na JAGDFN010000104.1 <> na Primary Assembly 952074 na Gpscaff_35 unplaced-scaffold na na JAGDFN010000018.1 <> na Primary Assembly 909007 na Gpscaff_36 unplaced-scaffold na na JAGDFN010000105.1 <> na Primary Assembly 896015 na Gpscaff_37 unplaced-scaffold na na JAGDFN010000019.1 <> na Primary Assembly 836735 na Gpscaff_38 unplaced-scaffold na na JAGDFN010000106.1 <> na Primary Assembly 801775 na Gpscaff_39 unplaced-scaffold na na JAGDFN010000020.1 <> na Primary Assembly 775596 na Gpscaff_4 unplaced-scaffold na na JAGDFN010000089.1 <> na Primary Assembly 5936283 na Gpscaff_40 unplaced-scaffold na na JAGDFN010000107.1 <> na Primary Assembly 770247 na Gpscaff_41 unplaced-scaffold na na JAGDFN010000021.1 <> na Primary Assembly 756233 na Gpscaff_42 unplaced-scaffold na na JAGDFN010000108.1 <> na Primary Assembly 751670 na Gpscaff_43 unplaced-scaffold na na JAGDFN010000022.1 <> na Primary Assembly 743717 na Gpscaff_44 unplaced-scaffold na na JAGDFN010000109.1 <> na Primary Assembly 715366 na Gpscaff_45 unplaced-scaffold na na JAGDFN010000023.1 <> na Primary Assembly 698898 na Gpscaff_46 unplaced-scaffold na na JAGDFN010000110.1 <> na Primary Assembly 690199 na Gpscaff_47 unplaced-scaffold na na JAGDFN010000024.1 <> na Primary Assembly 688071 na Gpscaff_48 unplaced-scaffold na na JAGDFN010000111.1 <> na Primary Assembly 672954 na Gpscaff_49 unplaced-scaffold na na JAGDFN010000025.1 <> na Primary Assembly 612101 na Gpscaff_5 unplaced-scaffold na na JAGDFN010000003.1 <> na Primary Assembly 4718991 na Gpscaff_50 unplaced-scaffold na na JAGDFN010000112.1 <> na Primary Assembly 610665 na Gpscaff_51 unplaced-scaffold na na JAGDFN010000026.1 <> na Primary Assembly 597491 na Gpscaff_52 unplaced-scaffold na na JAGDFN010000113.1 <> na Primary Assembly 591446 na Gpscaff_53 unplaced-scaffold na na JAGDFN010000027.1 <> na Primary Assembly 577423 na Gpscaff_54 unplaced-scaffold na na JAGDFN010000114.1 <> na Primary Assembly 570856 na Gpscaff_55 unplaced-scaffold na na JAGDFN010000028.1 <> na Primary Assembly 558119 na Gpscaff_56 unplaced-scaffold na na JAGDFN010000115.1 <> na Primary Assembly 545719 na Gpscaff_57 unplaced-scaffold na na JAGDFN010000029.1 <> na Primary Assembly 453552 na Gpscaff_58 unplaced-scaffold na na JAGDFN010000116.1 <> na Primary Assembly 429950 na Gpscaff_59 unplaced-scaffold na na JAGDFN010000030.1 <> na Primary Assembly 412379 na Gpscaff_6 unplaced-scaffold na na JAGDFN010000090.1 <> na Primary Assembly 4024597 na Gpscaff_60 unplaced-scaffold na na JAGDFN010000117.1 <> na Primary Assembly 403848 na Gpscaff_61 unplaced-scaffold na na JAGDFN010000031.1 <> na Primary Assembly 400379 na Gpscaff_62 unplaced-scaffold na na JAGDFN010000118.1 <> na Primary Assembly 373940 na Gpscaff_63 unplaced-scaffold na na JAGDFN010000032.1 <> na Primary Assembly 370524 na Gpscaff_64 unplaced-scaffold na na JAGDFN010000119.1 <> na Primary Assembly 368273 na Gpscaff_65 unplaced-scaffold na na JAGDFN010000033.1 <> na Primary Assembly 362213 na Gpscaff_66 unplaced-scaffold na na JAGDFN010000120.1 <> na Primary Assembly 361287 na Gpscaff_67 unplaced-scaffold na na JAGDFN010000034.1 <> na Primary Assembly 344057 na Gpscaff_68 unplaced-scaffold na na JAGDFN010000121.1 <> na Primary Assembly 343112 na Gpscaff_69 unplaced-scaffold na na JAGDFN010000035.1 <> na Primary Assembly 342596 na Gpscaff_7 unplaced-scaffold na na JAGDFN010000004.1 <> na Primary Assembly 3750375 na Gpscaff_70 unplaced-scaffold na na JAGDFN010000122.1 <> na Primary Assembly 334640 na Gpscaff_71 unplaced-scaffold na na JAGDFN010000036.1 <> na Primary Assembly 330091 na Gpscaff_72 unplaced-scaffold na na JAGDFN010000123.1 <> na Primary Assembly 303166 na Gpscaff_73 unplaced-scaffold na na JAGDFN010000037.1 <> na Primary Assembly 301165 na Gpscaff_74 unplaced-scaffold na na JAGDFN010000124.1 <> na Primary Assembly 272892 na Gpscaff_75 unplaced-scaffold na na JAGDFN010000038.1 <> na Primary Assembly 267646 na Gpscaff_76 unplaced-scaffold na na JAGDFN010000125.1 <> na Primary Assembly 245376 na Gpscaff_77 unplaced-scaffold na na JAGDFN010000039.1 <> na Primary Assembly 243613 na Gpscaff_78 unplaced-scaffold na na JAGDFN010000126.1 <> na Primary Assembly 229791 na Gpscaff_79 unplaced-scaffold na na JAGDFN010000040.1 <> na Primary Assembly 227389 na Gpscaff_8 unplaced-scaffold na na JAGDFN010000091.1 <> na Primary Assembly 3253666 na Gpscaff_80 unplaced-scaffold na na JAGDFN010000127.1 <> na Primary Assembly 220528 na Gpscaff_81 unplaced-scaffold na na JAGDFN010000041.1 <> na Primary Assembly 211598 na Gpscaff_82 unplaced-scaffold na na JAGDFN010000128.1 <> na Primary Assembly 209239 na Gpscaff_83 unplaced-scaffold na na JAGDFN010000042.1 <> na Primary Assembly 200106 na Gpscaff_84 unplaced-scaffold na na JAGDFN010000129.1 <> na Primary Assembly 189596 na Gpscaff_85 unplaced-scaffold na na JAGDFN010000043.1 <> na Primary Assembly 188488 na Gpscaff_86 unplaced-scaffold na na JAGDFN010000130.1 <> na Primary Assembly 185893 na Gpscaff_87 unplaced-scaffold na na JAGDFN010000044.1 <> na Primary Assembly 180981 na Gpscaff_88 unplaced-scaffold na na JAGDFN010000131.1 <> na Primary Assembly 175207 na Gpscaff_89 unplaced-scaffold na na JAGDFN010000045.1 <> na Primary Assembly 166924 na Gpscaff_9 unplaced-scaffold na na JAGDFN010000005.1 <> na Primary Assembly 3028301 na Gpscaff_90 unplaced-scaffold na na JAGDFN010000132.1 <> na Primary Assembly 160840 na Gpscaff_91 unplaced-scaffold na na JAGDFN010000046.1 <> na Primary Assembly 158582 na Gpscaff_92 unplaced-scaffold na na JAGDFN010000133.1 <> na Primary Assembly 149807 na Gpscaff_93 unplaced-scaffold na na JAGDFN010000047.1 <> na Primary Assembly 148643 na Gpscaff_94 unplaced-scaffold na na JAGDFN010000134.1 <> na Primary Assembly 142756 na Gpscaff_95 unplaced-scaffold na na JAGDFN010000048.1 <> na Primary Assembly 131494 na Gpscaff_96 unplaced-scaffold na na JAGDFN010000135.1 <> na Primary Assembly 131275 na Gpscaff_97 unplaced-scaffold na na JAGDFN010000049.1 <> na Primary Assembly 128575 na Gpscaff_98 unplaced-scaffold na na JAGDFN010000136.1 <> na Primary Assembly 127491 na Gpscaff_99 unplaced-scaffold na na JAGDFN010000050.1 <> na Primary Assembly 127026 na