# Assembly name: ASM2568891v1 # Organism name: Leishmania amazonensis (kinetoplastids) # Infraspecific name: strain=PH8 # Taxid: 5659 # BioSample: SAMN27400998 # BioProject: PRJNA824309 # Submitter: Universidade Federal de Minas Gerais # Date: 2022-10-18 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JANCRF01 # Assembly method: Canu v. 1.7; SPAdes v. 3.15 # Expected final version: yes # Reference guided assembly: GCA_000234665.4 # Genome coverage: 86.0x # Sequencing technology: PacBio RSII; Illumina HiSeq # GenBank assembly accession: GCA_025688915.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_025688925.1 Primary Assembly ## GCA_025688935.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Lama-PacBio.Chr01 assembled-molecule 1 Chromosome CM046895.1 <> na Primary Assembly 284646 na Lama-PacBio.Chr02 assembled-molecule 2 Chromosome CM046896.1 <> na Primary Assembly 360349 na Lama-PacBio.Chr03 assembled-molecule 3 Chromosome CM046897.1 <> na Primary Assembly 374730 na Lama-PacBio.Chr04 assembled-molecule 4 Chromosome CM046898.1 <> na Primary Assembly 435506 na Lama-PacBio.Chr05 assembled-molecule 5 Chromosome CM046899.1 <> na Primary Assembly 459675 na Lama-PacBio.Chr06 assembled-molecule 6 Chromosome CM046900.1 <> na Primary Assembly 499601 na Lama-PacBio.Chr07 assembled-molecule 7 Chromosome CM046901.1 <> na Primary Assembly 581002 na Lama-PacBio.Chr08 assembled-molecule 8 Chromosome CM046902.1 <> na Primary Assembly 1688018 na Lama-PacBio.Chr09 assembled-molecule 9 Chromosome CM046903.1 <> na Primary Assembly 539150 na Lama-PacBio.Chr10 assembled-molecule 10 Chromosome CM046904.1 <> na Primary Assembly 545184 na Lama-PacBio.Chr11 assembled-molecule 11 Chromosome CM046905.1 <> na Primary Assembly 567791 na Lama-PacBio.Chr12 assembled-molecule 12 Chromosome CM046906.1 <> na Primary Assembly 519912 na Lama-PacBio.Chr13 assembled-molecule 13 Chromosome CM046907.1 <> na Primary Assembly 610526 na Lama-PacBio.Chr14 assembled-molecule 14 Chromosome CM046908.1 <> na Primary Assembly 619973 na Lama-PacBio.Chr15 assembled-molecule 15 Chromosome CM046909.1 <> na Primary Assembly 582501 na Lama-PacBio.Chr16 assembled-molecule 16 Chromosome CM046910.1 <> na Primary Assembly 689378 na Lama-PacBio.Chr17 assembled-molecule 17 Chromosome CM046911.1 <> na Primary Assembly 661069 na Lama-PacBio.Chr18 assembled-molecule 18 Chromosome CM046912.1 <> na Primary Assembly 699909 na Lama-PacBio.Chr19 assembled-molecule 19 Chromosome CM046913.1 <> na Primary Assembly 678041 na Lama-PacBio.Chr20 assembled-molecule 20 Chromosome CM046914.1 <> na Primary Assembly 3400091 na Lama-PacBio.Chr21 assembled-molecule 21 Chromosome CM046915.1 <> na Primary Assembly 738754 na Lama-PacBio.Chr22 assembled-molecule 22 Chromosome CM046916.1 <> na Primary Assembly 718750 na Lama-PacBio.Chr23 assembled-molecule 23 Chromosome CM046917.1 <> na Primary Assembly 746902 na Lama-PacBio.Chr24 assembled-molecule 24 Chromosome CM046918.1 <> na Primary Assembly 831148 na Lama-PacBio.Chr25 assembled-molecule 25 Chromosome CM046919.1 <> na Primary Assembly 899317 na Lama-PacBio.Chr26 assembled-molecule 26 Chromosome CM046920.1 <> na Primary Assembly 1035646 na Lama-PacBio.Chr27 assembled-molecule 27 Chromosome CM046921.1 <> na Primary Assembly 1069554 na Lama-PacBio.Chr28 assembled-molecule 28 Chromosome CM046922.1 <> na Primary Assembly 1142017 na Lama-PacBio.Chr29 assembled-molecule 29 Chromosome CM046923.1 <> na Primary Assembly 1330138 na Lama-PacBio.Chr30 assembled-molecule 30 Chromosome CM046924.1 <> na Primary Assembly 1483778 na Lama-PacBio.Chr31 assembled-molecule 31 Chromosome CM046925.1 <> na Primary Assembly 1512673 na Lama-PacBio.Chr32 assembled-molecule 32 Chromosome CM046926.1 <> na Primary Assembly 1434409 na Lama-PacBio.Chr33 assembled-molecule 33 Chromosome CM046927.1 <> na Primary Assembly 1669896 na Lama-PacBio.Chr34 assembled-molecule 34 Chromosome CM046928.1 <> na Primary Assembly 1980469 na scaffold197_size35235_pilon unplaced-scaffold na na JANCRF010000036.1 <> na Primary Assembly 35235 na scaffold221_size28009_pilon unplaced-scaffold na na JANCRF010000037.1 <> na Primary Assembly 28009 na scaffold234_size23922_pilon unplaced-scaffold na na JANCRF010000038.1 <> na Primary Assembly 23924 na scaffold235_size23420_pilon unplaced-scaffold na na JANCRF010000039.1 <> na Primary Assembly 23428 na scaffold239_size21052_pilon unplaced-scaffold na na JANCRF010000040.1 <> na Primary Assembly 21056 na scaffold242_size20058_pilon unplaced-scaffold na na JANCRF010000041.1 <> na Primary Assembly 20068 na scaffold245_size19336_pilon unplaced-scaffold na na JANCRF010000042.1 <> na Primary Assembly 19336 na scaffold248_size18192_pilon unplaced-scaffold na na JANCRF010000043.1 <> na Primary Assembly 18177 na scaffold253_size16271_pilon unplaced-scaffold na na JANCRF010000044.1 <> na Primary Assembly 16272 na scaffold256_size23781_pilon unplaced-scaffold na na JANCRF010000045.1 <> na Primary Assembly 24009 na scaffold258_size14759_pilon unplaced-scaffold na na JANCRF010000046.1 <> na Primary Assembly 14764 na scaffold259_size14367_pilon unplaced-scaffold na na JANCRF010000047.1 <> na Primary Assembly 14367 na scaffold260_size13364_pilon unplaced-scaffold na na JANCRF010000048.1 <> na Primary Assembly 13371 na scaffold262_size12936_pilon unplaced-scaffold na na JANCRF010000049.1 <> na Primary Assembly 12936 na scaffold264_size12830_pilon unplaced-scaffold na na JANCRF010000050.1 <> na Primary Assembly 12829 na scaffold266_size12021_pilon unplaced-scaffold na na JANCRF010000051.1 <> na Primary Assembly 12024 na scaffold267_size11908_pilon unplaced-scaffold na na JANCRF010000052.1 <> na Primary Assembly 11908 na scaffold268_size11806_pilon unplaced-scaffold na na JANCRF010000053.1 <> na Primary Assembly 11807 na scaffold270_size11547_pilon unplaced-scaffold na na JANCRF010000054.1 <> na Primary Assembly 11547 na scaffold273_size10882_pilon unplaced-scaffold na na JANCRF010000055.1 <> na Primary Assembly 10882 na scaffold274_size10881_pilon unplaced-scaffold na na JANCRF010000056.1 <> na Primary Assembly 10881 na scaffold275_size10855_pilon unplaced-scaffold na na JANCRF010000057.1 <> na Primary Assembly 10862 na scaffold276_size10760_pilon unplaced-scaffold na na JANCRF010000058.1 <> na Primary Assembly 10760 na scaffold278_size10498_pilon unplaced-scaffold na na JANCRF010000059.1 <> na Primary Assembly 10499 na scaffold280_size10331_pilon unplaced-scaffold na na JANCRF010000060.1 <> na Primary Assembly 10331 na scaffold282_size9199_pilon unplaced-scaffold na na JANCRF010000061.1 <> na Primary Assembly 9199 na scaffold283_size8969_pilon unplaced-scaffold na na JANCRF010000062.1 <> na Primary Assembly 8984 na scaffold285_size8096_pilon unplaced-scaffold na na JANCRF010000063.1 <> na Primary Assembly 8096 na scaffold286_size8045_pilon unplaced-scaffold na na JANCRF010000064.1 <> na Primary Assembly 8030 na scaffold287_size7941_pilon unplaced-scaffold na na JANCRF010000065.1 <> na Primary Assembly 7941 na scaffold291_size7112_pilon unplaced-scaffold na na JANCRF010000066.1 <> na Primary Assembly 7110 na scaffold292_size11412_pilon unplaced-scaffold na na JANCRF010000067.1 <> na Primary Assembly 11375 na scaffold293_size6911_pilon unplaced-scaffold na na JANCRF010000068.1 <> na Primary Assembly 6912 na scaffold294_size6885_pilon unplaced-scaffold na na JANCRF010000069.1 <> na Primary Assembly 6885 na scaffold295_size6874_pilon unplaced-scaffold na na JANCRF010000070.1 <> na Primary Assembly 6873 na scaffold296_size6825_pilon unplaced-scaffold na na JANCRF010000071.1 <> na Primary Assembly 6825 na scaffold299_size6313_pilon unplaced-scaffold na na JANCRF010000072.1 <> na Primary Assembly 6314 na scaffold301_size5872_pilon unplaced-scaffold na na JANCRF010000073.1 <> na Primary Assembly 5872 na scaffold302_size5844_pilon unplaced-scaffold na na JANCRF010000074.1 <> na Primary Assembly 5844 na scaffold309_size3440_pilon unplaced-scaffold na na JANCRF010000075.1 <> na Primary Assembly 3440 na scaffold313_size1589_pilon unplaced-scaffold na na JANCRF010000076.1 <> na Primary Assembly 1589 na scaffold314_size1173_pilon unplaced-scaffold na na JANCRF010000077.1 <> na Primary Assembly 1173 na scaffold180_size41487_pilon assembled-molecule maxicircle Kinetoplast CM046929.1 <> na non-nuclear 18137 na