# Assembly name: rPleGil1.0.hap1 # Organism name: Plestiodon gilberti rubricaudatus (lizards & snakes) # Isolate: HBS 135693 # Taxid: 245608 # BioSample: SAMN30523592 # BioProject: PRJNA874061 # Submitter: UCLA # Date: 2022-11-14 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JANXHV01 # Assembly method: HiFiasm v. 0.16.1-r375; SALSA v. 2; Rapid curation v. https://gitlab.com/wtsi-grit/rapid-curation (commit 4ddca450) # Expected final version: no # Genome coverage: 56x # Sequencing technology: PacBio Sequel II; Illumina NovaSeq; Dovetails OmniC # GenBank assembly accession: GCA_026170395.1 # Linked assembly: GCA_026170595.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_026170455.1 Primary Assembly ## GCA_026170465.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SCAF_1 unplaced-scaffold na na JANXHV010000001.1 <> na Primary Assembly 267325462 na SCAF_2 unplaced-scaffold na na JANXHV010000002.1 <> na Primary Assembly 232098155 na SCAF_3 unplaced-scaffold na na JANXHV010000003.1 <> na Primary Assembly 217121865 na SCAF_4 unplaced-scaffold na na JANXHV010000004.1 <> na Primary Assembly 184425444 na SCAF_5 unplaced-scaffold na na JANXHV010000005.1 <> na Primary Assembly 171029266 na SCAF_6 unplaced-scaffold na na JANXHV010000006.1 <> na Primary Assembly 121658139 na SCAF_7 unplaced-scaffold na na JANXHV010000007.1 <> na Primary Assembly 58218706 na SCAF_8 unplaced-scaffold na na JANXHV010000008.1 <> na Primary Assembly 50622743 na SCAF_9 unplaced-scaffold na na JANXHV010000009.1 <> na Primary Assembly 37293703 na SCAF_10 unplaced-scaffold na na JANXHV010000010.1 <> na Primary Assembly 26955442 na SCAF_11 unplaced-scaffold na na JANXHV010000011.1 <> na Primary Assembly 26266241 na SCAF_12 unplaced-scaffold na na JANXHV010000012.1 <> na Primary Assembly 26158791 na SCAF_13 unplaced-scaffold na na JANXHV010000013.1 <> na Primary Assembly 25876323 na SCAF_14 unplaced-scaffold na na JANXHV010000014.1 <> na Primary Assembly 318131 na SCAF_15 unplaced-scaffold na na JANXHV010000015.1 <> na Primary Assembly 142592 na SCAF_16 unplaced-scaffold na na JANXHV010000016.1 <> na Primary Assembly 132809 na SCAF_17 unplaced-scaffold na na JANXHV010000017.1 <> na Primary Assembly 109379 na SCAF_18 unplaced-scaffold na na JANXHV010000018.1 <> na Primary Assembly 93346 na SCAF_19 unplaced-scaffold na na JANXHV010000019.1 <> na Primary Assembly 88816 na SCAF_20 unplaced-scaffold na na JANXHV010000020.1 <> na Primary Assembly 85035 na SCAF_21 unplaced-scaffold na na JANXHV010000021.1 <> na Primary Assembly 78567 na SCAF_22 unplaced-scaffold na na JANXHV010000022.1 <> na Primary Assembly 76850 na SCAF_23 unplaced-scaffold na na JANXHV010000023.1 <> na Primary Assembly 64734 na SCAF_24 unplaced-scaffold na na JANXHV010000024.1 <> na Primary Assembly 64673 na SCAF_25 unplaced-scaffold na na JANXHV010000025.1 <> na Primary Assembly 56651 na SCAF_26 unplaced-scaffold na na JANXHV010000026.1 <> na Primary Assembly 56199 na SCAF_27 unplaced-scaffold na na JANXHV010000027.1 <> na Primary Assembly 54757 na SCAF_28 unplaced-scaffold na na JANXHV010000028.1 <> na Primary Assembly 46767 na SCAF_29 unplaced-scaffold na na JANXHV010000029.1 <> na Primary Assembly 43977 na SCAF_30 unplaced-scaffold na na JANXHV010000030.1 <> na Primary Assembly 43286 na SCAF_31 unplaced-scaffold na na JANXHV010000031.1 <> na Primary Assembly 41434 na SCAF_32 unplaced-scaffold na na JANXHV010000032.1 <> na Primary Assembly 40906 na SCAF_33 unplaced-scaffold na na JANXHV010000033.1 <> na Primary Assembly 40629 na SCAF_34 unplaced-scaffold na na JANXHV010000034.1 <> na Primary Assembly 39809 na SCAF_35 unplaced-scaffold na na JANXHV010000035.1 <> na Primary Assembly 37433 na SCAF_36 unplaced-scaffold na na JANXHV010000036.1 <> na Primary Assembly 35779 na SCAF_37 unplaced-scaffold na na JANXHV010000037.1 <> na Primary Assembly 35588 na SCAF_38 unplaced-scaffold na na JANXHV010000038.1 <> na Primary Assembly 35357 na SCAF_39 unplaced-scaffold na na JANXHV010000039.1 <> na Primary Assembly 31678 na SCAF_40 unplaced-scaffold na na JANXHV010000040.1 <> na Primary Assembly 30814 na SCAF_41 unplaced-scaffold na na JANXHV010000041.1 <> na Primary Assembly 30172 na SCAF_42 unplaced-scaffold na na JANXHV010000042.1 <> na Primary Assembly 29273 na SCAF_43 unplaced-scaffold na na JANXHV010000043.1 <> na Primary Assembly 27653 na SCAF_44 unplaced-scaffold na na JANXHV010000044.1 <> na Primary Assembly 26766 na SCAF_45 unplaced-scaffold na na JANXHV010000045.1 <> na Primary Assembly 26048 na SCAF_46 unplaced-scaffold na na JANXHV010000046.1 <> na Primary Assembly 25966 na SCAF_47 unplaced-scaffold na na JANXHV010000047.1 <> na Primary Assembly 25534 na SCAF_48 unplaced-scaffold na na JANXHV010000048.1 <> na Primary Assembly 24145 na SCAF_49 unplaced-scaffold na na JANXHV010000049.1 <> na Primary Assembly 22089 na mtDNA unlocalized-scaffold MT Mitochondrion JANXHV010000050.1 <> na non-nuclear 16077 na