# Assembly name: fGilOrc1.0.hap1 # Organism name: Gila orcuttii (arroyo chub) # Isolate: AC-1 # Taxid: 71755 # BioSample: SAMN31536034 # BioProject: PRJNA896189 # Submitter: UCLA # Date: 2022-11-18 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAPDVR01 # Assembly method: HiFiasm v. 0.16.1-r375; SALSA v. 2; purge_dups v. 1.2.5; Rapid curation v. https://gitlab.com/wtsi-grit/rapid-curation (commit 4ddca450) # Expected final version: no # Genome coverage: 51.2x # Sequencing technology: Illumina NovaSeq; PacBio Sequel IIe; Dovetail's OmniC # RefSeq category: Representative Genome # GenBank assembly accession: GCA_026230005.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_026230015.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SCAF_1 unplaced-scaffold na na JAPDVR010000001.1 <> na Primary Assembly 75862728 na SCAF_10 unplaced-scaffold na na JAPDVR010000010.1 <> na Primary Assembly 50839473 na SCAF_100 unplaced-scaffold na na JAPDVR010000100.1 <> na Primary Assembly 43911 na SCAF_101 unplaced-scaffold na na JAPDVR010000101.1 <> na Primary Assembly 43691 na SCAF_102 unplaced-scaffold na na JAPDVR010000102.1 <> na Primary Assembly 43409 na SCAF_103 unplaced-scaffold na na JAPDVR010000103.1 <> na Primary Assembly 42220 na SCAF_104 unplaced-scaffold na na JAPDVR010000104.1 <> na Primary Assembly 42154 na SCAF_105 unplaced-scaffold na na JAPDVR010000105.1 <> na Primary Assembly 42074 na SCAF_106 unplaced-scaffold na na JAPDVR010000106.1 <> na Primary Assembly 41664 na SCAF_107 unplaced-scaffold na na JAPDVR010000107.1 <> na Primary Assembly 41189 na SCAF_108 unplaced-scaffold na na JAPDVR010000108.1 <> na Primary Assembly 40866 na SCAF_109 unplaced-scaffold na na JAPDVR010000109.1 <> na Primary Assembly 40715 na SCAF_11 unplaced-scaffold na na JAPDVR010000011.1 <> na Primary Assembly 50480577 na SCAF_110 unplaced-scaffold na na JAPDVR010000110.1 <> na Primary Assembly 40592 na SCAF_111 unplaced-scaffold na na JAPDVR010000111.1 <> na Primary Assembly 39829 na SCAF_112 unplaced-scaffold na na JAPDVR010000112.1 <> na Primary Assembly 39679 na SCAF_113 unplaced-scaffold na na JAPDVR010000113.1 <> na Primary Assembly 39656 na SCAF_114 unplaced-scaffold na na JAPDVR010000114.1 <> na Primary Assembly 39517 na SCAF_115 unplaced-scaffold na na JAPDVR010000115.1 <> na Primary Assembly 39291 na SCAF_116 unplaced-scaffold na na JAPDVR010000116.1 <> na Primary Assembly 38967 na SCAF_117 unplaced-scaffold na na JAPDVR010000117.1 <> na Primary Assembly 38850 na SCAF_118 unplaced-scaffold na na JAPDVR010000118.1 <> na Primary Assembly 38666 na SCAF_119 unplaced-scaffold na na JAPDVR010000119.1 <> na Primary Assembly 38129 na SCAF_12 unplaced-scaffold na na JAPDVR010000012.1 <> na Primary Assembly 46954412 na SCAF_120 unplaced-scaffold na na JAPDVR010000120.1 <> na Primary Assembly 36441 na SCAF_121 unplaced-scaffold na na JAPDVR010000121.1 <> na Primary Assembly 36423 na SCAF_122 unplaced-scaffold na na JAPDVR010000122.1 <> na Primary Assembly 35216 na SCAF_123 unplaced-scaffold na na JAPDVR010000123.1 <> na Primary Assembly 35175 na SCAF_124 unplaced-scaffold na na JAPDVR010000124.1 <> na Primary Assembly 33199 na SCAF_125 unplaced-scaffold na na JAPDVR010000125.1 <> na Primary Assembly 33016 na SCAF_126 unplaced-scaffold na na JAPDVR010000126.1 <> na Primary Assembly 32646 na SCAF_127 unplaced-scaffold na na JAPDVR010000127.1 <> na Primary Assembly 32225 na SCAF_128 unplaced-scaffold na na JAPDVR010000128.1 <> na Primary Assembly 31720 na SCAF_129 unplaced-scaffold na na JAPDVR010000129.1 <> na Primary Assembly 31698 na SCAF_13 unplaced-scaffold na na JAPDVR010000013.1 <> na Primary Assembly 45940610 na SCAF_130 unplaced-scaffold na na JAPDVR010000130.1 <> na Primary Assembly 31642 na SCAF_131 unplaced-scaffold na na JAPDVR010000131.1 <> na Primary Assembly 31388 na SCAF_132 unplaced-scaffold na na JAPDVR010000132.1 <> na Primary Assembly 31123 na SCAF_133 unplaced-scaffold na na JAPDVR010000133.1 <> na Primary Assembly 29930 na SCAF_134 unplaced-scaffold na na JAPDVR010000134.1 <> na Primary Assembly 29394 na SCAF_135 unplaced-scaffold na na JAPDVR010000135.1 <> na Primary Assembly 29207 na SCAF_136 unplaced-scaffold na na JAPDVR010000136.1 <> na Primary Assembly 28973 na SCAF_137 unplaced-scaffold na na JAPDVR010000137.1 <> na Primary Assembly 27965 na SCAF_138 unplaced-scaffold na na JAPDVR010000138.1 <> na Primary Assembly 27912 na SCAF_139 unplaced-scaffold na na JAPDVR010000139.1 <> na Primary Assembly 27414 na SCAF_14 unplaced-scaffold na na JAPDVR010000014.1 <> na Primary Assembly 45466361 na SCAF_140 unplaced-scaffold na na JAPDVR010000140.1 <> na Primary Assembly 27263 na SCAF_141 unplaced-scaffold na na JAPDVR010000141.1 <> na Primary Assembly 27226 na SCAF_142 unplaced-scaffold na na JAPDVR010000142.1 <> na Primary Assembly 26890 na SCAF_143 unplaced-scaffold na na JAPDVR010000143.1 <> na Primary Assembly 26416 na SCAF_144 unplaced-scaffold na na JAPDVR010000144.1 <> na Primary Assembly 25791 na SCAF_145 unplaced-scaffold na na JAPDVR010000145.1 <> na Primary Assembly 25626 na SCAF_146 unplaced-scaffold na na JAPDVR010000146.1 <> na Primary Assembly 25322 na SCAF_147 unplaced-scaffold na na JAPDVR010000147.1 <> na Primary Assembly 25118 na SCAF_148 unplaced-scaffold na na JAPDVR010000148.1 <> na Primary Assembly 24924 na SCAF_149 unplaced-scaffold na na JAPDVR010000149.1 <> na Primary Assembly 24838 na SCAF_15 unplaced-scaffold na na JAPDVR010000015.1 <> na Primary Assembly 45076427 na SCAF_150 unplaced-scaffold na na JAPDVR010000150.1 <> na Primary Assembly 24285 na SCAF_151 unplaced-scaffold na na JAPDVR010000151.1 <> na Primary Assembly 23674 na SCAF_152 unplaced-scaffold na na JAPDVR010000152.1 <> na Primary Assembly 23235 na SCAF_153 unplaced-scaffold na na JAPDVR010000153.1 <> na Primary Assembly 22860 na SCAF_154 unplaced-scaffold na na JAPDVR010000154.1 <> na Primary Assembly 22403 na SCAF_155 unplaced-scaffold na na JAPDVR010000155.1 <> na Primary Assembly 22287 na SCAF_156 unplaced-scaffold na na JAPDVR010000156.1 <> na Primary Assembly 22184 na SCAF_157 unplaced-scaffold na na JAPDVR010000157.1 <> na Primary Assembly 22006 na SCAF_158 unplaced-scaffold na na JAPDVR010000158.1 <> na Primary Assembly 21591 na SCAF_159 unplaced-scaffold na na JAPDVR010000159.1 <> na Primary Assembly 21313 na SCAF_16 unplaced-scaffold na na JAPDVR010000016.1 <> na Primary Assembly 45058838 na SCAF_160 unplaced-scaffold na na JAPDVR010000160.1 <> na Primary Assembly 20900 na SCAF_161 unplaced-scaffold na na JAPDVR010000161.1 <> na Primary Assembly 20889 na SCAF_162 unplaced-scaffold na na JAPDVR010000162.1 <> na Primary Assembly 20877 na SCAF_163 unplaced-scaffold na na JAPDVR010000163.1 <> na Primary Assembly 20148 na SCAF_164 unplaced-scaffold na na JAPDVR010000164.1 <> na Primary Assembly 20032 na SCAF_165 unplaced-scaffold na na JAPDVR010000165.1 <> na Primary Assembly 19856 na SCAF_166 unplaced-scaffold na na JAPDVR010000166.1 <> na Primary Assembly 19376 na SCAF_167 unplaced-scaffold na na JAPDVR010000167.1 <> na Primary Assembly 19346 na SCAF_168 unplaced-scaffold na na JAPDVR010000168.1 <> na Primary Assembly 18787 na SCAF_169 unplaced-scaffold na na JAPDVR010000169.1 <> na Primary Assembly 18673 na SCAF_17 unplaced-scaffold na na JAPDVR010000017.1 <> na Primary Assembly 44776782 na SCAF_170 unplaced-scaffold na na JAPDVR010000170.1 <> na Primary Assembly 18475 na SCAF_171 unplaced-scaffold na na JAPDVR010000171.1 <> na Primary Assembly 17964 na SCAF_172 unplaced-scaffold na na JAPDVR010000172.1 <> na Primary Assembly 17957 na SCAF_173 unplaced-scaffold na na JAPDVR010000173.1 <> na Primary Assembly 17705 na SCAF_174 unplaced-scaffold na na JAPDVR010000174.1 <> na Primary Assembly 17402 na SCAF_175 unplaced-scaffold na na JAPDVR010000175.1 <> na Primary Assembly 16151 na SCAF_176 unplaced-scaffold na na JAPDVR010000176.1 <> na Primary Assembly 15480 na SCAF_177 unplaced-scaffold na na JAPDVR010000177.1 <> na Primary Assembly 14693 na SCAF_178 unplaced-scaffold na na JAPDVR010000178.1 <> na Primary Assembly 13935 na SCAF_179 unplaced-scaffold na na JAPDVR010000179.1 <> na Primary Assembly 11170 na SCAF_18 unplaced-scaffold na na JAPDVR010000018.1 <> na Primary Assembly 44641088 na SCAF_19 unplaced-scaffold na na JAPDVR010000019.1 <> na Primary Assembly 44429665 na SCAF_2 unplaced-scaffold na na JAPDVR010000002.1 <> na Primary Assembly 70133685 na SCAF_20 unplaced-scaffold na na JAPDVR010000020.1 <> na Primary Assembly 42857134 na SCAF_21 unplaced-scaffold na na JAPDVR010000021.1 <> na Primary Assembly 41566598 na SCAF_22 unplaced-scaffold na na JAPDVR010000022.1 <> na Primary Assembly 41036803 na SCAF_23 unplaced-scaffold na na JAPDVR010000023.1 <> na Primary Assembly 38035920 na SCAF_24 unplaced-scaffold na na JAPDVR010000024.1 <> na Primary Assembly 36057961 na SCAF_25 unplaced-scaffold na na JAPDVR010000025.1 <> na Primary Assembly 33072725 na SCAF_26 unplaced-scaffold na na JAPDVR010000026.1 <> na Primary Assembly 2214051 na SCAF_27 unplaced-scaffold na na JAPDVR010000027.1 <> na Primary Assembly 1101030 na SCAF_28 unplaced-scaffold na na JAPDVR010000028.1 <> na Primary Assembly 949638 na SCAF_29 unplaced-scaffold na na JAPDVR010000029.1 <> na Primary Assembly 808387 na SCAF_3 unplaced-scaffold na na JAPDVR010000003.1 <> na Primary Assembly 66898338 na SCAF_30 unplaced-scaffold na na JAPDVR010000030.1 <> na Primary Assembly 804082 na SCAF_31 unplaced-scaffold na na JAPDVR010000031.1 <> na Primary Assembly 682516 na SCAF_32 unplaced-scaffold na na JAPDVR010000032.1 <> na Primary Assembly 438946 na SCAF_33 unplaced-scaffold na na JAPDVR010000033.1 <> na Primary Assembly 414040 na SCAF_34 unplaced-scaffold na na JAPDVR010000034.1 <> na Primary Assembly 373769 na SCAF_35 unplaced-scaffold na na JAPDVR010000035.1 <> na Primary Assembly 359198 na SCAF_36 unplaced-scaffold na na JAPDVR010000036.1 <> na Primary Assembly 329560 na SCAF_37 unplaced-scaffold na na JAPDVR010000037.1 <> na Primary Assembly 318747 na SCAF_38 unplaced-scaffold na na JAPDVR010000038.1 <> na Primary Assembly 305097 na SCAF_39 unplaced-scaffold na na JAPDVR010000039.1 <> na Primary Assembly 221665 na SCAF_4 unplaced-scaffold na na JAPDVR010000004.1 <> na Primary Assembly 63901396 na SCAF_40 unplaced-scaffold na na JAPDVR010000040.1 <> na Primary Assembly 208697 na SCAF_41 unplaced-scaffold na na JAPDVR010000041.1 <> na Primary Assembly 200574 na SCAF_42 unplaced-scaffold na na JAPDVR010000042.1 <> na Primary Assembly 200498 na SCAF_43 unplaced-scaffold na na JAPDVR010000043.1 <> na Primary Assembly 188095 na SCAF_44 unplaced-scaffold na na JAPDVR010000044.1 <> na Primary Assembly 147982 na SCAF_45 unplaced-scaffold na na JAPDVR010000045.1 <> na Primary Assembly 146970 na SCAF_46 unplaced-scaffold na na JAPDVR010000046.1 <> na Primary Assembly 129982 na SCAF_47 unplaced-scaffold na na JAPDVR010000047.1 <> na Primary Assembly 128365 na SCAF_48 unplaced-scaffold na na JAPDVR010000048.1 <> na Primary Assembly 121724 na SCAF_49 unplaced-scaffold na na JAPDVR010000049.1 <> na Primary Assembly 115937 na SCAF_5 unplaced-scaffold na na JAPDVR010000005.1 <> na Primary Assembly 58041496 na SCAF_50 unplaced-scaffold na na JAPDVR010000050.1 <> na Primary Assembly 113622 na SCAF_51 unplaced-scaffold na na JAPDVR010000051.1 <> na Primary Assembly 107637 na SCAF_52 unplaced-scaffold na na JAPDVR010000052.1 <> na Primary Assembly 103862 na SCAF_53 unplaced-scaffold na na JAPDVR010000053.1 <> na Primary Assembly 101180 na SCAF_54 unplaced-scaffold na na JAPDVR010000054.1 <> na Primary Assembly 98755 na SCAF_55 unplaced-scaffold na na JAPDVR010000055.1 <> na Primary Assembly 98695 na SCAF_56 unplaced-scaffold na na JAPDVR010000056.1 <> na Primary Assembly 97370 na SCAF_57 unplaced-scaffold na na JAPDVR010000057.1 <> na Primary Assembly 91897 na SCAF_58 unplaced-scaffold na na JAPDVR010000058.1 <> na Primary Assembly 91306 na SCAF_59 unplaced-scaffold na na JAPDVR010000059.1 <> na Primary Assembly 87174 na SCAF_6 unplaced-scaffold na na JAPDVR010000006.1 <> na Primary Assembly 55863816 na SCAF_60 unplaced-scaffold na na JAPDVR010000060.1 <> na Primary Assembly 82642 na SCAF_61 unplaced-scaffold na na JAPDVR010000061.1 <> na Primary Assembly 80224 na SCAF_62 unplaced-scaffold na na JAPDVR010000062.1 <> na Primary Assembly 78823 na SCAF_63 unplaced-scaffold na na JAPDVR010000063.1 <> na Primary Assembly 71200 na SCAF_64 unplaced-scaffold na na JAPDVR010000064.1 <> na Primary Assembly 71122 na SCAF_65 unplaced-scaffold na na JAPDVR010000065.1 <> na Primary Assembly 71034 na SCAF_66 unplaced-scaffold na na JAPDVR010000066.1 <> na Primary Assembly 69488 na SCAF_67 unplaced-scaffold na na JAPDVR010000067.1 <> na Primary Assembly 68219 na SCAF_68 unplaced-scaffold na na JAPDVR010000068.1 <> na Primary Assembly 67951 na SCAF_69 unplaced-scaffold na na JAPDVR010000069.1 <> na Primary Assembly 67150 na SCAF_7 unplaced-scaffold na na JAPDVR010000007.1 <> na Primary Assembly 54566886 na SCAF_70 unplaced-scaffold na na JAPDVR010000070.1 <> na Primary Assembly 65792 na SCAF_71 unplaced-scaffold na na JAPDVR010000071.1 <> na Primary Assembly 64939 na SCAF_72 unplaced-scaffold na na JAPDVR010000072.1 <> na Primary Assembly 63252 na SCAF_73 unplaced-scaffold na na JAPDVR010000073.1 <> na Primary Assembly 63138 na SCAF_74 unplaced-scaffold na na JAPDVR010000074.1 <> na Primary Assembly 61188 na SCAF_75 unplaced-scaffold na na JAPDVR010000075.1 <> na Primary Assembly 60919 na SCAF_76 unplaced-scaffold na na JAPDVR010000076.1 <> na Primary Assembly 60293 na SCAF_77 unplaced-scaffold na na JAPDVR010000077.1 <> na Primary Assembly 57204 na SCAF_78 unplaced-scaffold na na JAPDVR010000078.1 <> na Primary Assembly 57153 na SCAF_79 unplaced-scaffold na na JAPDVR010000079.1 <> na Primary Assembly 56548 na SCAF_8 unplaced-scaffold na na JAPDVR010000008.1 <> na Primary Assembly 52752510 na SCAF_80 unplaced-scaffold na na JAPDVR010000080.1 <> na Primary Assembly 55371 na SCAF_81 unplaced-scaffold na na JAPDVR010000081.1 <> na Primary Assembly 52935 na SCAF_82 unplaced-scaffold na na JAPDVR010000082.1 <> na Primary Assembly 52692 na SCAF_83 unplaced-scaffold na na JAPDVR010000083.1 <> na Primary Assembly 52223 na SCAF_84 unplaced-scaffold na na JAPDVR010000084.1 <> na Primary Assembly 52139 na SCAF_85 unplaced-scaffold na na JAPDVR010000085.1 <> na Primary Assembly 51519 na SCAF_86 unplaced-scaffold na na JAPDVR010000086.1 <> na Primary Assembly 50158 na SCAF_87 unplaced-scaffold na na JAPDVR010000087.1 <> na Primary Assembly 50129 na SCAF_88 unplaced-scaffold na na JAPDVR010000088.1 <> na Primary Assembly 49800 na SCAF_89 unplaced-scaffold na na JAPDVR010000089.1 <> na Primary Assembly 49371 na SCAF_9 unplaced-scaffold na na JAPDVR010000009.1 <> na Primary Assembly 52583258 na SCAF_90 unplaced-scaffold na na JAPDVR010000090.1 <> na Primary Assembly 49240 na SCAF_91 unplaced-scaffold na na JAPDVR010000091.1 <> na Primary Assembly 48968 na SCAF_92 unplaced-scaffold na na JAPDVR010000092.1 <> na Primary Assembly 48051 na SCAF_93 unplaced-scaffold na na JAPDVR010000093.1 <> na Primary Assembly 47670 na SCAF_94 unplaced-scaffold na na JAPDVR010000094.1 <> na Primary Assembly 47401 na SCAF_95 unplaced-scaffold na na JAPDVR010000095.1 <> na Primary Assembly 45831 na SCAF_96 unplaced-scaffold na na JAPDVR010000096.1 <> na Primary Assembly 45096 na SCAF_97 unplaced-scaffold na na JAPDVR010000097.1 <> na Primary Assembly 44914 na SCAF_98 unplaced-scaffold na na JAPDVR010000098.1 <> na Primary Assembly 44875 na SCAF_99 unplaced-scaffold na na JAPDVR010000099.1 <> na Primary Assembly 44209 na