# Assembly name: fNeoGra1.pri # Organism name: Neoarius graeffei (lesser salmon catfish) # Isolate: fNeoGra1 # Taxid: 443677 # BioSample: SAMN28453209 # BioProject: PRJNA839496 # Submitter: Vertebrate Genomes Project # Date: 2023-01-09 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAQCNV01 # Assembly method: HiFiasm v. 0.15.4 + galaxy0; purge_dups v. 1.2.5 + galaxy3; Bionano Solve v. 3.6.1 + galaxy2; salsa v. 2.3 + galaxy1; gEVAL manual curation v. 2022-03-11; VGP pipeline v. 2.0 # Expected final version: no # Genome coverage: 33.08x # Sequencing technology: PacBio Sequel II HiFi; Bionano DLS; Arima Hi-C v2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_027579695.1 # RefSeq assembly accession: GCF_027579695.1 # RefSeq assembly and GenBank assemblies identical: yes # Linked assembly: GCA_027579805.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_027579705.1 GCF_027579705.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM050620.1 = NC_083569.1 Primary Assembly 131004987 na SUPER_2 assembled-molecule 2 Chromosome CM050621.1 = NC_083570.1 Primary Assembly 128049136 na SUPER_3 assembled-molecule 3 Chromosome CM050622.1 = NC_083571.1 Primary Assembly 120827915 na SUPER_4 assembled-molecule 4 Chromosome CM050623.1 = NC_083572.1 Primary Assembly 116857340 na SUPER_5 assembled-molecule 5 Chromosome CM050624.1 = NC_083573.1 Primary Assembly 115142545 na SUPER_6 assembled-molecule 6 Chromosome CM050625.1 = NC_083574.1 Primary Assembly 108542782 na SUPER_7 assembled-molecule 7 Chromosome CM050626.1 = NC_083575.1 Primary Assembly 101093934 na SUPER_8 assembled-molecule 8 Chromosome CM050627.1 = NC_083576.1 Primary Assembly 95325205 na SUPER_9 assembled-molecule 9 Chromosome CM050628.1 = NC_083577.1 Primary Assembly 94375734 na SUPER_10 assembled-molecule 10 Chromosome CM050629.1 = NC_083578.1 Primary Assembly 93710430 na SUPER_11 assembled-molecule 11 Chromosome CM050630.1 = NC_083579.1 Primary Assembly 83992109 na SUPER_12 assembled-molecule 12 Chromosome CM050631.1 = NC_083580.1 Primary Assembly 83211567 na SUPER_13 assembled-molecule 13 Chromosome CM050632.1 = NC_083581.1 Primary Assembly 82585149 na SUPER_14 assembled-molecule 14 Chromosome CM050633.1 = NC_083582.1 Primary Assembly 81271077 na SUPER_15 assembled-molecule 15 Chromosome CM050634.1 = NC_083583.1 Primary Assembly 77723859 na SUPER_16 assembled-molecule 16 Chromosome CM050635.1 = NC_083584.1 Primary Assembly 72045086 na SUPER_17 assembled-molecule 17 Chromosome CM050636.1 = NC_083585.1 Primary Assembly 71690296 na SUPER_18 assembled-molecule 18 Chromosome CM050637.1 = NC_083586.1 Primary Assembly 69919870 na SUPER_19 assembled-molecule 19 Chromosome CM050638.1 = NC_083587.1 Primary Assembly 70272553 na SUPER_20 assembled-molecule 20 Chromosome CM050639.1 = NC_083588.1 Primary Assembly 67959712 na SUPER_21 assembled-molecule 21 Chromosome CM050640.1 = NC_083589.1 Primary Assembly 64775943 na SUPER_22 assembled-molecule 22 Chromosome CM050641.1 = NC_083590.1 Primary Assembly 61228016 na SUPER_23 assembled-molecule 23 Chromosome CM050642.1 = NC_083591.1 Primary Assembly 61199794 na SUPER_24 assembled-molecule 24 Chromosome CM050643.1 = NC_083592.1 Primary Assembly 60863970 na SUPER_25 assembled-molecule 25 Chromosome CM050644.1 = NC_083593.1 Primary Assembly 59480341 na SUPER_26 assembled-molecule 26 Chromosome CM050645.1 = NC_083594.1 Primary Assembly 57119244 na SUPER_27 assembled-molecule 27 Chromosome CM050646.1 = NC_083595.1 Primary Assembly 56612596 na SUPER_28 assembled-molecule 28 Chromosome CM050647.1 = NC_083596.1 Primary Assembly 53088085 na SUPER_18_unloc_1 unlocalized-scaffold 18 Chromosome JAQCNV010000019.1 = NW_026869982.1 Primary Assembly 1466559 na scaffold_65 unplaced-scaffold na na JAQCNV010000031.1 = NW_026869983.1 Primary Assembly 97568 na scaffold_69 unplaced-scaffold na na JAQCNV010000035.1 = NW_026869984.1 Primary Assembly 58756 na scaffold_70 unplaced-scaffold na na JAQCNV010000036.1 = NW_026869985.1 Primary Assembly 58029 na scaffold_71 unplaced-scaffold na na JAQCNV010000033.1 = NW_026869986.1 Primary Assembly 57839 na scaffold_72 unplaced-scaffold na na JAQCNV010000034.1 = NW_026869987.1 Primary Assembly 54399 na scaffold_73 unplaced-scaffold na na JAQCNV010000030.1 = NW_026869988.1 Primary Assembly 53963 na scaffold_75 unplaced-scaffold na na JAQCNV010000032.1 = NW_026869989.1 Primary Assembly 36903 na scaffold_77 unplaced-scaffold na na JAQCNV010000038.1 = NW_026869990.1 Primary Assembly 33725 na scaffold_78 unplaced-scaffold na na JAQCNV010000037.1 = NW_026869991.1 Primary Assembly 29346 na