# Assembly name: fOdoBon6.hap1 # Organism name: Odontesthes bonariensis (pejerrey) # Isolate: fOdoBon6 # Sex: female # Taxid: 219752 # BioSample: SAMN31802211 # BioProject: PRJNA916695 # Submitter: Vertebrate Genomes Project # Date: 2023-01-24 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAQIHL01 # Assembly method: Hifiasm + Hi-C phasing v. 0.16.1 + galaxy3; salsa v. 2.3 + galaxy2 # Expected final version: no # Genome coverage: 30.0x # Sequencing technology: PacBio Sequel II HiFi # RefSeq category: Representative Genome # GenBank assembly accession: GCA_027942865.1 # Linked assembly: GCA_027942885.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_027942875.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM051314.1 <> na Primary Assembly 48530455 na SUPER_2 assembled-molecule 2 Chromosome CM051315.1 <> na Primary Assembly 46866981 na SUPER_3 assembled-molecule 3 Chromosome CM051316.1 <> na Primary Assembly 46517560 na SUPER_4 assembled-molecule 4 Chromosome CM051317.1 <> na Primary Assembly 43253418 na SUPER_5 assembled-molecule 5 Chromosome CM051318.1 <> na Primary Assembly 42246571 na SUPER_6 assembled-molecule 6 Chromosome CM051319.1 <> na Primary Assembly 40692466 na SUPER_7 assembled-molecule 7 Chromosome CM051320.1 <> na Primary Assembly 41215030 na SUPER_8 assembled-molecule 8 Chromosome CM051321.1 <> na Primary Assembly 40284323 na SUPER_9 assembled-molecule 9 Chromosome CM051322.1 <> na Primary Assembly 40116169 na SUPER_10 assembled-molecule 10 Chromosome CM051323.1 <> na Primary Assembly 39970412 na SUPER_11 assembled-molecule 11 Chromosome CM051324.1 <> na Primary Assembly 39502134 na SUPER_12 assembled-molecule 12 Chromosome CM051325.1 <> na Primary Assembly 39252737 na SUPER_13 assembled-molecule 13 Chromosome CM051326.1 <> na Primary Assembly 39020208 na SUPER_14 assembled-molecule 14 Chromosome CM051327.1 <> na Primary Assembly 38544298 na SUPER_15 assembled-molecule 15 Chromosome CM051328.1 <> na Primary Assembly 38364060 na SUPER_16 assembled-molecule 16 Chromosome CM051329.1 <> na Primary Assembly 38312557 na SUPER_17 assembled-molecule 17 Chromosome CM051330.1 <> na Primary Assembly 37732935 na SUPER_18 assembled-molecule 18 Chromosome CM051331.1 <> na Primary Assembly 36235340 na SUPER_19 assembled-molecule 19 Chromosome CM051332.1 <> na Primary Assembly 35389666 na SUPER_20 assembled-molecule 20 Chromosome CM051333.1 <> na Primary Assembly 34576827 na SUPER_21 assembled-molecule 21 Chromosome CM051334.1 <> na Primary Assembly 34033288 na SUPER_22 assembled-molecule 22 Chromosome CM051335.1 <> na Primary Assembly 33056536 na SUPER_23 assembled-molecule 23 Chromosome CM051336.1 <> na Primary Assembly 32313146 na SUPER_24 assembled-molecule 24 Chromosome CM051337.1 <> na Primary Assembly 31615452 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JAQIHL010000005.1 <> na Primary Assembly 101332 na SUPER_6_unloc_1 unlocalized-scaffold 6 Chromosome JAQIHL010000008.1 <> na Primary Assembly 568938 na SUPER_6_unloc_2 unlocalized-scaffold 6 Chromosome JAQIHL010000009.1 <> na Primary Assembly 317855 na SUPER_6_unloc_3 unlocalized-scaffold 6 Chromosome JAQIHL010000010.1 <> na Primary Assembly 221197 na SUPER_6_unloc_4 unlocalized-scaffold 6 Chromosome JAQIHL010000011.1 <> na Primary Assembly 43707 na scaffold_110 unplaced-scaffold na na JAQIHL010000030.1 <> na Primary Assembly 250067 na scaffold_111 unplaced-scaffold na na JAQIHL010000031.1 <> na Primary Assembly 244917 na scaffold_120 unplaced-scaffold na na JAQIHL010000032.1 <> na Primary Assembly 174700 na scaffold_123 unplaced-scaffold na na JAQIHL010000033.1 <> na Primary Assembly 168237 na scaffold_128 unplaced-scaffold na na JAQIHL010000034.1 <> na Primary Assembly 134869 na scaffold_143 unplaced-scaffold na na JAQIHL010000035.1 <> na Primary Assembly 99220 na scaffold_154 unplaced-scaffold na na JAQIHL010000036.1 <> na Primary Assembly 88681 na scaffold_156 unplaced-scaffold na na JAQIHL010000037.1 <> na Primary Assembly 88198 na scaffold_157 unplaced-scaffold na na JAQIHL010000038.1 <> na Primary Assembly 87593 na scaffold_163 unplaced-scaffold na na JAQIHL010000039.1 <> na Primary Assembly 78050 na scaffold_164 unplaced-scaffold na na JAQIHL010000040.1 <> na Primary Assembly 77455 na scaffold_168 unplaced-scaffold na na JAQIHL010000041.1 <> na Primary Assembly 71210 na scaffold_176 unplaced-scaffold na na JAQIHL010000042.1 <> na Primary Assembly 64018 na scaffold_181 unplaced-scaffold na na JAQIHL010000043.1 <> na Primary Assembly 54238 na scaffold_182 unplaced-scaffold na na JAQIHL010000044.1 <> na Primary Assembly 52471 na scaffold_183 unplaced-scaffold na na JAQIHL010000045.1 <> na Primary Assembly 51793 na scaffold_184 unplaced-scaffold na na JAQIHL010000046.1 <> na Primary Assembly 51530 na scaffold_186 unplaced-scaffold na na JAQIHL010000047.1 <> na Primary Assembly 50849 na scaffold_187 unplaced-scaffold na na JAQIHL010000048.1 <> na Primary Assembly 50441 na scaffold_169 unplaced-scaffold na na JAQIHL010000049.1 <> na Primary Assembly 69912 na scaffold_188 unplaced-scaffold na na JAQIHL010000050.1 <> na Primary Assembly 50153 na scaffold_193 unplaced-scaffold na na JAQIHL010000051.1 <> na Primary Assembly 45671 na scaffold_215 unplaced-scaffold na na JAQIHL010000052.1 <> na Primary Assembly 37635 na scaffold_216 unplaced-scaffold na na JAQIHL010000053.1 <> na Primary Assembly 37311 na scaffold_217 unplaced-scaffold na na JAQIHL010000054.1 <> na Primary Assembly 37164 na scaffold_221 unplaced-scaffold na na JAQIHL010000055.1 <> na Primary Assembly 35506 na scaffold_265 unplaced-scaffold na na JAQIHL010000056.1 <> na Primary Assembly 26872 na scaffold_266 unplaced-scaffold na na JAQIHL010000057.1 <> na Primary Assembly 26853 na scaffold_279 unplaced-scaffold na na JAQIHL010000058.1 <> na Primary Assembly 24425 na scaffold_280 unplaced-scaffold na na JAQIHL010000059.1 <> na Primary Assembly 24375 na scaffold_283 unplaced-scaffold na na JAQIHL010000060.1 <> na Primary Assembly 23869 na scaffold_226 unplaced-scaffold na na JAQIHL010000061.1 <> na Primary Assembly 34516 na scaffold_227 unplaced-scaffold na na JAQIHL010000062.1 <> na Primary Assembly 34411 na scaffold_228 unplaced-scaffold na na JAQIHL010000063.1 <> na Primary Assembly 34236 na scaffold_232 unplaced-scaffold na na JAQIHL010000064.1 <> na Primary Assembly 33579 na scaffold_233 unplaced-scaffold na na JAQIHL010000065.1 <> na Primary Assembly 33419 na scaffold_234 unplaced-scaffold na na JAQIHL010000066.1 <> na Primary Assembly 33369 na scaffold_235 unplaced-scaffold na na JAQIHL010000067.1 <> na Primary Assembly 33304 na scaffold_236 unplaced-scaffold na na JAQIHL010000068.1 <> na Primary Assembly 33223 na scaffold_244 unplaced-scaffold na na JAQIHL010000069.1 <> na Primary Assembly 31296 na scaffold_245 unplaced-scaffold na na JAQIHL010000070.1 <> na Primary Assembly 30478 na scaffold_246 unplaced-scaffold na na JAQIHL010000071.1 <> na Primary Assembly 30442 na scaffold_247 unplaced-scaffold na na JAQIHL010000072.1 <> na Primary Assembly 30408 na scaffold_248 unplaced-scaffold na na JAQIHL010000073.1 <> na Primary Assembly 30220 na scaffold_250 unplaced-scaffold na na JAQIHL010000074.1 <> na Primary Assembly 30014 na scaffold_251 unplaced-scaffold na na JAQIHL010000075.1 <> na Primary Assembly 29709 na scaffold_252 unplaced-scaffold na na JAQIHL010000076.1 <> na Primary Assembly 29602 na scaffold_253 unplaced-scaffold na na JAQIHL010000077.1 <> na Primary Assembly 29397 na scaffold_254 unplaced-scaffold na na JAQIHL010000078.1 <> na Primary Assembly 29259 na scaffold_255 unplaced-scaffold na na JAQIHL010000079.1 <> na Primary Assembly 29146 na scaffold_256 unplaced-scaffold na na JAQIHL010000080.1 <> na Primary Assembly 29139 na scaffold_260 unplaced-scaffold na na JAQIHL010000081.1 <> na Primary Assembly 28479 na scaffold_295 unplaced-scaffold na na JAQIHL010000082.1 <> na Primary Assembly 21431 na scaffold_296 unplaced-scaffold na na JAQIHL010000083.1 <> na Primary Assembly 21353 na scaffold_300 unplaced-scaffold na na JAQIHL010000084.1 <> na Primary Assembly 19974 na scaffold_302 unplaced-scaffold na na JAQIHL010000085.1 <> na Primary Assembly 19534 na scaffold_303 unplaced-scaffold na na JAQIHL010000086.1 <> na Primary Assembly 19531 na scaffold_305 unplaced-scaffold na na JAQIHL010000087.1 <> na Primary Assembly 18501 na scaffold_119 unplaced-scaffold na na JAQIHL010000088.1 <> na Primary Assembly 176415 na scaffold_138 unplaced-scaffold na na JAQIHL010000089.1 <> na Primary Assembly 109988 na scaffold_145 unplaced-scaffold na na JAQIHL010000090.1 <> na Primary Assembly 98314 na scaffold_135 unplaced-scaffold na na JAQIHL010000091.1 <> na Primary Assembly 116768 na scaffold_167 unplaced-scaffold na na JAQIHL010000092.1 <> na Primary Assembly 71220 na scaffold_158 unplaced-scaffold na na JAQIHL010000093.1 <> na Primary Assembly 86300 na scaffold_144 unplaced-scaffold na na JAQIHL010000094.1 <> na Primary Assembly 98598 na scaffold_155 unplaced-scaffold na na JAQIHL010000095.1 <> na Primary Assembly 88236 na scaffold_197 unplaced-scaffold na na JAQIHL010000096.1 <> na Primary Assembly 44396 na scaffold_139 unplaced-scaffold na na JAQIHL010000097.1 <> na Primary Assembly 109579 na scaffold_150 unplaced-scaffold na na JAQIHL010000098.1 <> na Primary Assembly 93381 na scaffold_195 unplaced-scaffold na na JAQIHL010000099.1 <> na Primary Assembly 45499 na scaffold_241 unplaced-scaffold na na JAQIHL010000100.1 <> na Primary Assembly 31934 na scaffold_262 unplaced-scaffold na na JAQIHL010000101.1 <> na Primary Assembly 27428 na scaffold_263 unplaced-scaffold na na JAQIHL010000102.1 <> na Primary Assembly 27056 na scaffold_268 unplaced-scaffold na na JAQIHL010000103.1 <> na Primary Assembly 26203 na scaffold_269 unplaced-scaffold na na JAQIHL010000104.1 <> na Primary Assembly 25887 na scaffold_271 unplaced-scaffold na na JAQIHL010000105.1 <> na Primary Assembly 25675 na scaffold_272 unplaced-scaffold na na JAQIHL010000106.1 <> na Primary Assembly 25509 na scaffold_273 unplaced-scaffold na na JAQIHL010000107.1 <> na Primary Assembly 25229 na scaffold_274 unplaced-scaffold na na JAQIHL010000108.1 <> na Primary Assembly 24887 na scaffold_275 unplaced-scaffold na na JAQIHL010000109.1 <> na Primary Assembly 24886 na scaffold_257 unplaced-scaffold na na JAQIHL010000110.1 <> na Primary Assembly 29123 na scaffold_286 unplaced-scaffold na na JAQIHL010000111.1 <> na Primary Assembly 23738 na scaffold_261 unplaced-scaffold na na JAQIHL010000112.1 <> na Primary Assembly 27835 na scaffold_264 unplaced-scaffold na na JAQIHL010000113.1 <> na Primary Assembly 27032 na scaffold_285 unplaced-scaffold na na JAQIHL010000114.1 <> na Primary Assembly 23754 na scaffold_288 unplaced-scaffold na na JAQIHL010000115.1 <> na Primary Assembly 23635 na scaffold_290 unplaced-scaffold na na JAQIHL010000116.1 <> na Primary Assembly 22497 na scaffold_229 unplaced-scaffold na na JAQIHL010000117.1 <> na Primary Assembly 34225 na scaffold_230 unplaced-scaffold na na JAQIHL010000118.1 <> na Primary Assembly 34131 na scaffold_222 unplaced-scaffold na na JAQIHL010000119.1 <> na Primary Assembly 35250 na scaffold_224 unplaced-scaffold na na JAQIHL010000120.1 <> na Primary Assembly 34648 na scaffold_267 unplaced-scaffold na na JAQIHL010000121.1 <> na Primary Assembly 26627 na scaffold_277 unplaced-scaffold na na JAQIHL010000122.1 <> na Primary Assembly 24669 na scaffold_225 unplaced-scaffold na na JAQIHL010000123.1 <> na Primary Assembly 34584 na scaffold_231 unplaced-scaffold na na JAQIHL010000124.1 <> na Primary Assembly 33930 na scaffold_249 unplaced-scaffold na na JAQIHL010000125.1 <> na Primary Assembly 30156 na scaffold_281 unplaced-scaffold na na JAQIHL010000126.1 <> na Primary Assembly 24164 na scaffold_282 unplaced-scaffold na na JAQIHL010000127.1 <> na Primary Assembly 24074 na scaffold_291 unplaced-scaffold na na JAQIHL010000128.1 <> na Primary Assembly 22287 na scaffold_293 unplaced-scaffold na na JAQIHL010000129.1 <> na Primary Assembly 21697 na scaffold_287 unplaced-scaffold na na JAQIHL010000130.1 <> na Primary Assembly 23712 na scaffold_258 unplaced-scaffold na na JAQIHL010000131.1 <> na Primary Assembly 28841 na scaffold_223 unplaced-scaffold na na JAQIHL010000132.1 <> na Primary Assembly 35246 na scaffold_297 unplaced-scaffold na na JAQIHL010000133.1 <> na Primary Assembly 21315 na scaffold_299 unplaced-scaffold na na JAQIHL010000134.1 <> na Primary Assembly 20116 na scaffold_259 unplaced-scaffold na na JAQIHL010000135.1 <> na Primary Assembly 28742 na scaffold_276 unplaced-scaffold na na JAQIHL010000136.1 <> na Primary Assembly 24720 na scaffold_237 unplaced-scaffold na na JAQIHL010000137.1 <> na Primary Assembly 33035 na scaffold_238 unplaced-scaffold na na JAQIHL010000138.1 <> na Primary Assembly 32815 na scaffold_239 unplaced-scaffold na na JAQIHL010000139.1 <> na Primary Assembly 32811 na scaffold_218 unplaced-scaffold na na JAQIHL010000140.1 <> na Primary Assembly 36503 na scaffold_220 unplaced-scaffold na na JAQIHL010000141.1 <> na Primary Assembly 35727 na scaffold_240 unplaced-scaffold na na JAQIHL010000142.1 <> na Primary Assembly 32373 na scaffold_242 unplaced-scaffold na na JAQIHL010000143.1 <> na Primary Assembly 31712 na scaffold_243 unplaced-scaffold na na JAQIHL010000144.1 <> na Primary Assembly 31553 na scaffold_165 unplaced-scaffold na na JAQIHL010000145.1 <> na Primary Assembly 72117 na scaffold_292 unplaced-scaffold na na JAQIHL010000146.1 <> na Primary Assembly 22021 na scaffold_175 unplaced-scaffold na na JAQIHL010000147.1 <> na Primary Assembly 64060 na scaffold_177 unplaced-scaffold na na JAQIHL010000148.1 <> na Primary Assembly 62280 na scaffold_185 unplaced-scaffold na na JAQIHL010000149.1 <> na Primary Assembly 50860 na scaffold_191 unplaced-scaffold na na JAQIHL010000150.1 <> na Primary Assembly 46998 na scaffold_192 unplaced-scaffold na na JAQIHL010000151.1 <> na Primary Assembly 45680 na scaffold_194 unplaced-scaffold na na JAQIHL010000152.1 <> na Primary Assembly 45659 na scaffold_196 unplaced-scaffold na na JAQIHL010000153.1 <> na Primary Assembly 44691 na scaffold_198 unplaced-scaffold na na JAQIHL010000154.1 <> na Primary Assembly 43920 na scaffold_200 unplaced-scaffold na na JAQIHL010000155.1 <> na Primary Assembly 43042 na scaffold_202 unplaced-scaffold na na JAQIHL010000156.1 <> na Primary Assembly 39880 na scaffold_204 unplaced-scaffold na na JAQIHL010000157.1 <> na Primary Assembly 39590 na scaffold_205 unplaced-scaffold na na JAQIHL010000158.1 <> na Primary Assembly 39367 na scaffold_207 unplaced-scaffold na na JAQIHL010000159.1 <> na Primary Assembly 39104 na scaffold_208 unplaced-scaffold na na JAQIHL010000160.1 <> na Primary Assembly 38540 na scaffold_209 unplaced-scaffold na na JAQIHL010000161.1 <> na Primary Assembly 38466 na scaffold_210 unplaced-scaffold na na JAQIHL010000162.1 <> na Primary Assembly 38146 na scaffold_211 unplaced-scaffold na na JAQIHL010000163.1 <> na Primary Assembly 38037 na scaffold_212 unplaced-scaffold na na JAQIHL010000164.1 <> na Primary Assembly 37700 na scaffold_213 unplaced-scaffold na na JAQIHL010000165.1 <> na Primary Assembly 37654 na scaffold_214 unplaced-scaffold na na JAQIHL010000166.1 <> na Primary Assembly 37651 na scaffold_306 unplaced-scaffold na na JAQIHL010000167.1 <> na Primary Assembly 17638 na scaffold_308 unplaced-scaffold na na JAQIHL010000168.1 <> na Primary Assembly 17484 na scaffold_310 unplaced-scaffold na na JAQIHL010000169.1 <> na Primary Assembly 16426 na scaffold_312 unplaced-scaffold na na JAQIHL010000170.1 <> na Primary Assembly 15179 na scaffold_314 unplaced-scaffold na na JAQIHL010000171.1 <> na Primary Assembly 14549 na scaffold_316 unplaced-scaffold na na JAQIHL010000172.1 <> na Primary Assembly 12512 na scaffold_318 unplaced-scaffold na na JAQIHL010000173.1 <> na Primary Assembly 11854 na scaffold_320 unplaced-scaffold na na JAQIHL010000174.1 <> na Primary Assembly 10916 na scaffold_270 unplaced-scaffold na na JAQIHL010000175.1 <> na Primary Assembly 25868 na scaffold_278 unplaced-scaffold na na JAQIHL010000176.1 <> na Primary Assembly 24567 na scaffold_284 unplaced-scaffold na na JAQIHL010000177.1 <> na Primary Assembly 23763 na scaffold_289 unplaced-scaffold na na JAQIHL010000178.1 <> na Primary Assembly 23195 na scaffold_294 unplaced-scaffold na na JAQIHL010000179.1 <> na Primary Assembly 21447 na scaffold_298 unplaced-scaffold na na JAQIHL010000180.1 <> na Primary Assembly 21058 na scaffold_301 unplaced-scaffold na na JAQIHL010000181.1 <> na Primary Assembly 19834 na scaffold_304 unplaced-scaffold na na JAQIHL010000182.1 <> na Primary Assembly 18567 na scaffold_307 unplaced-scaffold na na JAQIHL010000183.1 <> na Primary Assembly 17532 na scaffold_309 unplaced-scaffold na na JAQIHL010000184.1 <> na Primary Assembly 16476 na scaffold_311 unplaced-scaffold na na JAQIHL010000185.1 <> na Primary Assembly 15908 na scaffold_313 unplaced-scaffold na na JAQIHL010000186.1 <> na Primary Assembly 14574 na scaffold_315 unplaced-scaffold na na JAQIHL010000187.1 <> na Primary Assembly 13025 na scaffold_317 unplaced-scaffold na na JAQIHL010000188.1 <> na Primary Assembly 12074 na scaffold_319 unplaced-scaffold na na JAQIHL010000189.1 <> na Primary Assembly 11471 na