# Assembly name: fLycPai1.hap2 # Organism name: Lycodopsis pacificus (blackbelly eelpout) # Isolate: fLycPai1 # Sex: female # Taxid: 1772091 # BioSample: SAMN32629383 # BioProject: PRJNA921714 # Submitter: Vertebrate Genomes Project # Date: 2023-01-31 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAQMIO01 # Assembly method: Hifiasm + Hi-C phasing v. 0.16.1 + galaxy2; yahs v. 1.2a + galaxy1 # Expected final version: no # Genome coverage: 68.0x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_028022725.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_028022835.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM051688.1 <> na Primary Assembly 26738787 na SUPER_2 assembled-molecule 2 Chromosome CM051689.1 <> na Primary Assembly 33962080 na SUPER_3 assembled-molecule 3 Chromosome CM051690.1 <> na Primary Assembly 32987677 na SUPER_4 assembled-molecule 4 Chromosome CM051691.1 <> na Primary Assembly 31957550 na SUPER_5 assembled-molecule 5 Chromosome CM051692.1 <> na Primary Assembly 31514019 na SUPER_6 assembled-molecule 6 Chromosome CM051693.1 <> na Primary Assembly 31005273 na SUPER_7 assembled-molecule 7 Chromosome CM051694.1 <> na Primary Assembly 30819574 na SUPER_8 assembled-molecule 8 Chromosome CM051695.1 <> na Primary Assembly 29716585 na SUPER_9 assembled-molecule 9 Chromosome CM051696.1 <> na Primary Assembly 29175471 na SUPER_10 assembled-molecule 10 Chromosome CM051697.1 <> na Primary Assembly 29058480 na SUPER_11 assembled-molecule 11 Chromosome CM051698.1 <> na Primary Assembly 28913003 na SUPER_12 assembled-molecule 12 Chromosome CM051699.1 <> na Primary Assembly 27720618 na SUPER_13 assembled-molecule 13 Chromosome CM051700.1 <> na Primary Assembly 27523886 na SUPER_14 assembled-molecule 14 Chromosome CM051701.1 <> na Primary Assembly 25654995 na SUPER_15 assembled-molecule 15 Chromosome CM051702.1 <> na Primary Assembly 25514015 na SUPER_16 assembled-molecule 16 Chromosome CM051703.1 <> na Primary Assembly 24762163 na SUPER_17 assembled-molecule 17 Chromosome CM051704.1 <> na Primary Assembly 23036160 na SUPER_18 assembled-molecule 18 Chromosome CM051705.1 <> na Primary Assembly 24624059 na SUPER_19 assembled-molecule 19 Chromosome CM051706.1 <> na Primary Assembly 24440255 na SUPER_20 assembled-molecule 20 Chromosome CM051707.1 <> na Primary Assembly 22250436 na SUPER_21 assembled-molecule 21 Chromosome CM051708.1 <> na Primary Assembly 21007521 na SUPER_22 assembled-molecule 22 Chromosome CM051709.1 <> na Primary Assembly 20352501 na SUPER_23 assembled-molecule 23 Chromosome CM051710.1 <> na Primary Assembly 19033986 na SUPER_24 assembled-molecule 24 Chromosome CM051711.1 <> na Primary Assembly 14608150 na SUPER_1_unloc_1 unlocalized-scaffold 1 Chromosome JAQMIO010000002.1 <> na Primary Assembly 603787 na SUPER_1_unloc_2 unlocalized-scaffold 1 Chromosome JAQMIO010000003.1 <> na Primary Assembly 441000 na SUPER_1_unloc_3 unlocalized-scaffold 1 Chromosome JAQMIO010000004.1 <> na Primary Assembly 298159 na SUPER_1_unloc_4 unlocalized-scaffold 1 Chromosome JAQMIO010000005.1 <> na Primary Assembly 286907 na SUPER_1_unloc_5 unlocalized-scaffold 1 Chromosome JAQMIO010000006.1 <> na Primary Assembly 270802 na SUPER_1_unloc_6 unlocalized-scaffold 1 Chromosome JAQMIO010000007.1 <> na Primary Assembly 262965 na SUPER_1_unloc_7 unlocalized-scaffold 1 Chromosome JAQMIO010000008.1 <> na Primary Assembly 251722 na SUPER_1_unloc_8 unlocalized-scaffold 1 Chromosome JAQMIO010000009.1 <> na Primary Assembly 228713 na SUPER_1_unloc_9 unlocalized-scaffold 1 Chromosome JAQMIO010000010.1 <> na Primary Assembly 226949 na SUPER_1_unloc_10 unlocalized-scaffold 1 Chromosome JAQMIO010000011.1 <> na Primary Assembly 218000 na SUPER_1_unloc_11 unlocalized-scaffold 1 Chromosome JAQMIO010000012.1 <> na Primary Assembly 195602 na SUPER_1_unloc_12 unlocalized-scaffold 1 Chromosome JAQMIO010000013.1 <> na Primary Assembly 177842 na SUPER_1_unloc_13 unlocalized-scaffold 1 Chromosome JAQMIO010000014.1 <> na Primary Assembly 169102 na SUPER_1_unloc_14 unlocalized-scaffold 1 Chromosome JAQMIO010000015.1 <> na Primary Assembly 165463 na SUPER_1_unloc_15 unlocalized-scaffold 1 Chromosome JAQMIO010000016.1 <> na Primary Assembly 154181 na SUPER_1_unloc_16 unlocalized-scaffold 1 Chromosome JAQMIO010000017.1 <> na Primary Assembly 151069 na SUPER_1_unloc_17 unlocalized-scaffold 1 Chromosome JAQMIO010000018.1 <> na Primary Assembly 149848 na SUPER_1_unloc_18 unlocalized-scaffold 1 Chromosome JAQMIO010000019.1 <> na Primary Assembly 131965 na SUPER_1_unloc_19 unlocalized-scaffold 1 Chromosome JAQMIO010000020.1 <> na Primary Assembly 128316 na SUPER_1_unloc_20 unlocalized-scaffold 1 Chromosome JAQMIO010000021.1 <> na Primary Assembly 117164 na SUPER_1_unloc_21 unlocalized-scaffold 1 Chromosome JAQMIO010000022.1 <> na Primary Assembly 115223 na SUPER_1_unloc_22 unlocalized-scaffold 1 Chromosome JAQMIO010000023.1 <> na Primary Assembly 107427 na SUPER_1_unloc_23 unlocalized-scaffold 1 Chromosome JAQMIO010000024.1 <> na Primary Assembly 103988 na SUPER_1_unloc_24 unlocalized-scaffold 1 Chromosome JAQMIO010000025.1 <> na Primary Assembly 101641 na SUPER_1_unloc_25 unlocalized-scaffold 1 Chromosome JAQMIO010000026.1 <> na Primary Assembly 99845 na SUPER_1_unloc_26 unlocalized-scaffold 1 Chromosome JAQMIO010000027.1 <> na Primary Assembly 97575 na SUPER_1_unloc_27 unlocalized-scaffold 1 Chromosome JAQMIO010000028.1 <> na Primary Assembly 93326 na SUPER_1_unloc_28 unlocalized-scaffold 1 Chromosome JAQMIO010000029.1 <> na Primary Assembly 90404 na SUPER_1_unloc_29 unlocalized-scaffold 1 Chromosome JAQMIO010000030.1 <> na Primary Assembly 88246 na SUPER_1_unloc_30 unlocalized-scaffold 1 Chromosome JAQMIO010000031.1 <> na Primary Assembly 86709 na SUPER_1_unloc_31 unlocalized-scaffold 1 Chromosome JAQMIO010000032.1 <> na Primary Assembly 85665 na SUPER_1_unloc_32 unlocalized-scaffold 1 Chromosome JAQMIO010000033.1 <> na Primary Assembly 83740 na SUPER_1_unloc_33 unlocalized-scaffold 1 Chromosome JAQMIO010000034.1 <> na Primary Assembly 83728 na SUPER_1_unloc_34 unlocalized-scaffold 1 Chromosome JAQMIO010000035.1 <> na Primary Assembly 82359 na SUPER_1_unloc_35 unlocalized-scaffold 1 Chromosome JAQMIO010000036.1 <> na Primary Assembly 80190 na SUPER_1_unloc_36 unlocalized-scaffold 1 Chromosome JAQMIO010000037.1 <> na Primary Assembly 75341 na SUPER_1_unloc_37 unlocalized-scaffold 1 Chromosome JAQMIO010000038.1 <> na Primary Assembly 75199 na SUPER_1_unloc_38 unlocalized-scaffold 1 Chromosome JAQMIO010000039.1 <> na Primary Assembly 74132 na SUPER_1_unloc_39 unlocalized-scaffold 1 Chromosome JAQMIO010000040.1 <> na Primary Assembly 74111 na SUPER_1_unloc_40 unlocalized-scaffold 1 Chromosome JAQMIO010000041.1 <> na Primary Assembly 72737 na SUPER_1_unloc_41 unlocalized-scaffold 1 Chromosome JAQMIO010000042.1 <> na Primary Assembly 71000 na SUPER_1_unloc_42 unlocalized-scaffold 1 Chromosome JAQMIO010000043.1 <> na Primary Assembly 69815 na SUPER_1_unloc_43 unlocalized-scaffold 1 Chromosome JAQMIO010000044.1 <> na Primary Assembly 67956 na SUPER_1_unloc_44 unlocalized-scaffold 1 Chromosome JAQMIO010000045.1 <> na Primary Assembly 66631 na SUPER_1_unloc_45 unlocalized-scaffold 1 Chromosome JAQMIO010000046.1 <> na Primary Assembly 66405 na SUPER_1_unloc_46 unlocalized-scaffold 1 Chromosome JAQMIO010000047.1 <> na Primary Assembly 66336 na SUPER_1_unloc_47 unlocalized-scaffold 1 Chromosome JAQMIO010000048.1 <> na Primary Assembly 64521 na SUPER_1_unloc_48 unlocalized-scaffold 1 Chromosome JAQMIO010000049.1 <> na Primary Assembly 62102 na SUPER_1_unloc_49 unlocalized-scaffold 1 Chromosome JAQMIO010000050.1 <> na Primary Assembly 61322 na SUPER_1_unloc_50 unlocalized-scaffold 1 Chromosome JAQMIO010000051.1 <> na Primary Assembly 54195 na SUPER_1_unloc_51 unlocalized-scaffold 1 Chromosome JAQMIO010000052.1 <> na Primary Assembly 52894 na SUPER_1_unloc_52 unlocalized-scaffold 1 Chromosome JAQMIO010000053.1 <> na Primary Assembly 52628 na SUPER_1_unloc_53 unlocalized-scaffold 1 Chromosome JAQMIO010000054.1 <> na Primary Assembly 50435 na SUPER_1_unloc_54 unlocalized-scaffold 1 Chromosome JAQMIO010000055.1 <> na Primary Assembly 47911 na SUPER_1_unloc_55 unlocalized-scaffold 1 Chromosome JAQMIO010000056.1 <> na Primary Assembly 41499 na SUPER_1_unloc_56 unlocalized-scaffold 1 Chromosome JAQMIO010000057.1 <> na Primary Assembly 40999 na SUPER_1_unloc_57 unlocalized-scaffold 1 Chromosome JAQMIO010000058.1 <> na Primary Assembly 34810 na SUPER_1_unloc_58 unlocalized-scaffold 1 Chromosome JAQMIO010000059.1 <> na Primary Assembly 31138 na SUPER_17_unloc_1 unlocalized-scaffold 17 Chromosome JAQMIO010000076.1 <> na Primary Assembly 782662 na SUPER_17_unloc_2 unlocalized-scaffold 17 Chromosome JAQMIO010000077.1 <> na Primary Assembly 433841 na SUPER_17_unloc_3 unlocalized-scaffold 17 Chromosome JAQMIO010000078.1 <> na Primary Assembly 267000 na SUPER_17_unloc_4 unlocalized-scaffold 17 Chromosome JAQMIO010000079.1 <> na Primary Assembly 225515 na scaffold_101 unplaced-scaffold na na JAQMIO010000090.1 <> na Primary Assembly 67757 na scaffold_115 unplaced-scaffold na na JAQMIO010000091.1 <> na Primary Assembly 53762 na scaffold_119 unplaced-scaffold na na JAQMIO010000094.1 <> na Primary Assembly 51846 na scaffold_121 unplaced-scaffold na na JAQMIO010000092.1 <> na Primary Assembly 51189 na scaffold_132 unplaced-scaffold na na JAQMIO010000093.1 <> na Primary Assembly 42026 na scaffold_143 unplaced-scaffold na na JAQMIO010000095.1 <> na Primary Assembly 37773 na scaffold_145 unplaced-scaffold na na JAQMIO010000096.1 <> na Primary Assembly 37030 na scaffold_149 unplaced-scaffold na na JAQMIO010000097.1 <> na Primary Assembly 33368 na scaffold_152 unplaced-scaffold na na JAQMIO010000098.1 <> na Primary Assembly 32345 na scaffold_155 unplaced-scaffold na na JAQMIO010000099.1 <> na Primary Assembly 31003 na scaffold_159 unplaced-scaffold na na JAQMIO010000100.1 <> na Primary Assembly 27558 na scaffold_15_1 unplaced-scaffold na na JAQMIO010000108.1 <> na Primary Assembly 24671 na scaffold_162 unplaced-scaffold na na JAQMIO010000101.1 <> na Primary Assembly 26470 na scaffold_166 unplaced-scaffold na na JAQMIO010000102.1 <> na Primary Assembly 25713 na scaffold_171 unplaced-scaffold na na JAQMIO010000103.1 <> na Primary Assembly 23146 na scaffold_173 unplaced-scaffold na na JAQMIO010000104.1 <> na Primary Assembly 20773 na scaffold_175 unplaced-scaffold na na JAQMIO010000105.1 <> na Primary Assembly 17727 na scaffold_177 unplaced-scaffold na na JAQMIO010000106.1 <> na Primary Assembly 15942 na scaffold_179 unplaced-scaffold na na JAQMIO010000109.1 <> na Primary Assembly 15420 na scaffold_180 unplaced-scaffold na na JAQMIO010000107.1 <> na Primary Assembly 1000 na scaffold_75 unplaced-scaffold na na JAQMIO010000087.1 <> na Primary Assembly 93172 na scaffold_87 unplaced-scaffold na na JAQMIO010000088.1 <> na Primary Assembly 81626 na scaffold_99 unplaced-scaffold na na JAQMIO010000089.1 <> na Primary Assembly 68544 na