# Assembly name: bAphCal1.0.hap1 # Organism name: Aphelocoma californica (Western scrub-jay) # Infraspecific name: ecotype=California # Isolate: MVZ Bird 193978 # Sex: female # Taxid: 142466 # BioSample: SAMN31837216 # BioProject: PRJNA904314 # Submitter: UCLA # Date: 2023-02-07 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAQMYR01 # Assembly method: HiFiasm v. 0.16.1-r375; SALSA v. 2; Rapid Curation v. https://gitlab.com/wtsi-grit/rapid-curation (commit 4ddca450) # Expected final version: no # Genome coverage: 51x # Sequencing technology: PacBio Sequel II; Illumina NovaSeq; Dovetail OmniC # RefSeq category: Representative Genome # GenBank assembly accession: GCA_028536675.1 # Linked assembly: GCA_028536645.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_028539875.1 Primary Assembly ## GCA_028540055.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SCAF_1 unplaced-scaffold na na JAQMYR010000001.1 <> na Primary Assembly 158410743 na SCAF_2 unplaced-scaffold na na JAQMYR010000002.1 <> na Primary Assembly 123516787 na SCAF_3 unplaced-scaffold na na JAQMYR010000003.1 <> na Primary Assembly 118744334 na SCAF_4 unplaced-scaffold na na JAQMYR010000004.1 <> na Primary Assembly 81997125 na SCAF_5 unplaced-scaffold na na JAQMYR010000005.1 <> na Primary Assembly 77613735 na SCAF_6 unplaced-scaffold na na JAQMYR010000006.1 <> na Primary Assembly 76801313 na SCAF_7 unplaced-scaffold na na JAQMYR010000007.1 <> na Primary Assembly 66144195 na SCAF_8 unplaced-scaffold na na JAQMYR010000008.1 <> na Primary Assembly 40649121 na SCAF_9 unplaced-scaffold na na JAQMYR010000009.1 <> na Primary Assembly 38359923 na SCAF_10 unplaced-scaffold na na JAQMYR010000010.1 <> na Primary Assembly 37843927 na SCAF_11 unplaced-scaffold na na JAQMYR010000011.1 <> na Primary Assembly 33344784 na SCAF_12 unplaced-scaffold na na JAQMYR010000012.1 <> na Primary Assembly 29232974 na SCAF_13 unplaced-scaffold na na JAQMYR010000013.1 <> na Primary Assembly 23373897 na SCAF_14 unplaced-scaffold na na JAQMYR010000014.1 <> na Primary Assembly 22617445 na SCAF_15 unplaced-scaffold na na JAQMYR010000015.1 <> na Primary Assembly 21403609 na SCAF_16 unplaced-scaffold na na JAQMYR010000016.1 <> na Primary Assembly 21275476 na SCAF_17 unplaced-scaffold na na JAQMYR010000017.1 <> na Primary Assembly 19687445 na SCAF_18 unplaced-scaffold na na JAQMYR010000018.1 <> na Primary Assembly 19466230 na SCAF_19 unplaced-scaffold na na JAQMYR010000019.1 <> na Primary Assembly 18250211 na SCAF_20 unplaced-scaffold na na JAQMYR010000020.1 <> na Primary Assembly 14942432 na SCAF_21 unplaced-scaffold na na JAQMYR010000021.1 <> na Primary Assembly 12486004 na SCAF_22 unplaced-scaffold na na JAQMYR010000022.1 <> na Primary Assembly 11276974 na SCAF_23 unplaced-scaffold na na JAQMYR010000023.1 <> na Primary Assembly 11204096 na SCAF_24 unplaced-scaffold na na JAQMYR010000024.1 <> na Primary Assembly 8428578 na SCAF_25 unplaced-scaffold na na JAQMYR010000025.1 <> na Primary Assembly 7774336 na SCAF_26 unplaced-scaffold na na JAQMYR010000026.1 <> na Primary Assembly 7503768 na SCAF_27 unplaced-scaffold na na JAQMYR010000027.1 <> na Primary Assembly 7022793 na SCAF_28 unplaced-scaffold na na JAQMYR010000028.1 <> na Primary Assembly 6969207 na SCAF_29 unplaced-scaffold na na JAQMYR010000029.1 <> na Primary Assembly 5809375 na SCAF_30 unplaced-scaffold na na JAQMYR010000030.1 <> na Primary Assembly 5289951 na SCAF_31 unplaced-scaffold na na JAQMYR010000031.1 <> na Primary Assembly 3100310 na SCAF_32 unplaced-scaffold na na JAQMYR010000032.1 <> na Primary Assembly 2984542 na SCAF_33 unplaced-scaffold na na JAQMYR010000033.1 <> na Primary Assembly 2787981 na SCAF_34 unplaced-scaffold na na JAQMYR010000034.1 <> na Primary Assembly 2185330 na SCAF_35 unplaced-scaffold na na JAQMYR010000035.1 <> na Primary Assembly 2017209 na SCAF_36 unplaced-scaffold na na JAQMYR010000036.1 <> na Primary Assembly 1926433 na SCAF_37 unplaced-scaffold na na JAQMYR010000037.1 <> na Primary Assembly 1898389 na SCAF_38 unplaced-scaffold na na JAQMYR010000038.1 <> na Primary Assembly 1856987 na SCAF_39 unplaced-scaffold na na JAQMYR010000039.1 <> na Primary Assembly 1765259 na SCAF_40 unplaced-scaffold na na JAQMYR010000040.1 <> na Primary Assembly 1649178 na SCAF_41 unplaced-scaffold na na JAQMYR010000041.1 <> na Primary Assembly 1625195 na SCAF_42 unplaced-scaffold na na JAQMYR010000042.1 <> na Primary Assembly 1618848 na SCAF_43 unplaced-scaffold na na JAQMYR010000043.1 <> na Primary Assembly 1497473 na SCAF_44 unplaced-scaffold na na JAQMYR010000044.1 <> na Primary Assembly 1449219 na SCAF_45 unplaced-scaffold na na JAQMYR010000045.1 <> na Primary Assembly 1428966 na SCAF_46 unplaced-scaffold na na JAQMYR010000046.1 <> na Primary Assembly 1427287 na SCAF_47 unplaced-scaffold na na JAQMYR010000047.1 <> na Primary Assembly 1399892 na SCAF_48 unplaced-scaffold na na JAQMYR010000048.1 <> na Primary Assembly 1346456 na SCAF_49 unplaced-scaffold na na JAQMYR010000049.1 <> na Primary Assembly 1302053 na SCAF_50 unplaced-scaffold na na JAQMYR010000050.1 <> na Primary Assembly 1274260 na SCAF_51 unplaced-scaffold na na JAQMYR010000051.1 <> na Primary Assembly 1242178 na SCAF_52 unplaced-scaffold na na JAQMYR010000052.1 <> na Primary Assembly 1236960 na SCAF_53 unplaced-scaffold na na JAQMYR010000053.1 <> na Primary Assembly 1200582 na SCAF_54 unplaced-scaffold na na JAQMYR010000054.1 <> na Primary Assembly 1196031 na SCAF_55 unplaced-scaffold na na JAQMYR010000055.1 <> na Primary Assembly 1188954 na SCAF_56 unplaced-scaffold na na JAQMYR010000056.1 <> na Primary Assembly 1185889 na SCAF_57 unplaced-scaffold na na JAQMYR010000057.1 <> na Primary Assembly 1164591 na SCAF_58 unplaced-scaffold na na JAQMYR010000058.1 <> na Primary Assembly 1154549 na SCAF_59 unplaced-scaffold na na JAQMYR010000059.1 <> na Primary Assembly 1136067 na SCAF_60 unplaced-scaffold na na JAQMYR010000060.1 <> na Primary Assembly 1126974 na SCAF_61 unplaced-scaffold na na JAQMYR010000061.1 <> na Primary Assembly 1086905 na SCAF_62 unplaced-scaffold na na JAQMYR010000062.1 <> na Primary Assembly 1081481 na SCAF_63 unplaced-scaffold na na JAQMYR010000063.1 <> na Primary Assembly 1002242 na SCAF_64 unplaced-scaffold na na JAQMYR010000064.1 <> na Primary Assembly 992988 na SCAF_65 unplaced-scaffold na na JAQMYR010000065.1 <> na Primary Assembly 977827 na SCAF_66 unplaced-scaffold na na JAQMYR010000066.1 <> na Primary Assembly 976351 na SCAF_67 unplaced-scaffold na na JAQMYR010000067.1 <> na Primary Assembly 968597 na SCAF_68 unplaced-scaffold na na JAQMYR010000068.1 <> na Primary Assembly 939169 na SCAF_69 unplaced-scaffold na na JAQMYR010000069.1 <> na Primary Assembly 916422 na SCAF_70 unplaced-scaffold na na JAQMYR010000070.1 <> na Primary Assembly 903845 na SCAF_71 unplaced-scaffold na na JAQMYR010000071.1 <> na Primary Assembly 899231 na SCAF_72 unplaced-scaffold na na JAQMYR010000072.1 <> na Primary Assembly 891040 na SCAF_73 unplaced-scaffold na na JAQMYR010000073.1 <> na Primary Assembly 875501 na SCAF_74 unplaced-scaffold na na JAQMYR010000074.1 <> na Primary Assembly 852608 na SCAF_75 unplaced-scaffold na na JAQMYR010000075.1 <> na Primary Assembly 851480 na SCAF_76 unplaced-scaffold na na JAQMYR010000076.1 <> na Primary Assembly 810233 na SCAF_77 unplaced-scaffold na na JAQMYR010000077.1 <> na Primary Assembly 764491 na SCAF_78 unplaced-scaffold na na JAQMYR010000078.1 <> na Primary Assembly 763542 na SCAF_79 unplaced-scaffold na na JAQMYR010000079.1 <> na Primary Assembly 739085 na SCAF_80 unplaced-scaffold na na JAQMYR010000080.1 <> na Primary Assembly 737637 na SCAF_81 unplaced-scaffold na na JAQMYR010000081.1 <> na Primary Assembly 736030 na SCAF_82 unplaced-scaffold na na JAQMYR010000082.1 <> na Primary Assembly 718826 na SCAF_83 unplaced-scaffold na na JAQMYR010000083.1 <> na Primary Assembly 715404 na SCAF_84 unplaced-scaffold na na JAQMYR010000084.1 <> na Primary Assembly 687146 na SCAF_85 unplaced-scaffold na na JAQMYR010000085.1 <> na Primary Assembly 683918 na SCAF_86 unplaced-scaffold na na JAQMYR010000086.1 <> na Primary Assembly 682518 na SCAF_87 unplaced-scaffold na na JAQMYR010000087.1 <> na Primary Assembly 671280 na SCAF_88 unplaced-scaffold na na JAQMYR010000088.1 <> na Primary Assembly 634833 na SCAF_89 unplaced-scaffold na na JAQMYR010000089.1 <> na Primary Assembly 633682 na SCAF_90 unplaced-scaffold na na JAQMYR010000090.1 <> na Primary Assembly 629223 na SCAF_91 unplaced-scaffold na na JAQMYR010000091.1 <> na Primary Assembly 616619 na SCAF_92 unplaced-scaffold na na JAQMYR010000092.1 <> na Primary Assembly 615433 na SCAF_93 unplaced-scaffold na na JAQMYR010000093.1 <> na Primary Assembly 603470 na SCAF_94 unplaced-scaffold na na JAQMYR010000094.1 <> na Primary Assembly 601101 na SCAF_95 unplaced-scaffold na na JAQMYR010000095.1 <> na Primary Assembly 588552 na SCAF_96 unplaced-scaffold na na JAQMYR010000096.1 <> na Primary Assembly 572571 na SCAF_97 unplaced-scaffold na na JAQMYR010000097.1 <> na Primary Assembly 571998 na SCAF_98 unplaced-scaffold na na JAQMYR010000098.1 <> na Primary Assembly 571393 na SCAF_99 unplaced-scaffold na na JAQMYR010000099.1 <> na Primary Assembly 568002 na SCAF_100 unplaced-scaffold na na JAQMYR010000100.1 <> na Primary Assembly 565181 na SCAF_101 unplaced-scaffold na na JAQMYR010000101.1 <> na Primary Assembly 562987 na SCAF_102 unplaced-scaffold na na JAQMYR010000102.1 <> na Primary Assembly 554941 na SCAF_103 unplaced-scaffold na na JAQMYR010000103.1 <> na Primary Assembly 535876 na SCAF_104 unplaced-scaffold na na JAQMYR010000104.1 <> na Primary Assembly 519292 na SCAF_105 unplaced-scaffold na na JAQMYR010000105.1 <> na Primary Assembly 510743 na SCAF_106 unplaced-scaffold na na JAQMYR010000106.1 <> na Primary Assembly 495823 na SCAF_107 unplaced-scaffold na na JAQMYR010000107.1 <> na Primary Assembly 495709 na SCAF_108 unplaced-scaffold na na JAQMYR010000108.1 <> na Primary Assembly 491589 na SCAF_109 unplaced-scaffold na na JAQMYR010000109.1 <> na Primary Assembly 489837 na SCAF_110 unplaced-scaffold na na JAQMYR010000110.1 <> na Primary Assembly 489759 na SCAF_111 unplaced-scaffold na na JAQMYR010000111.1 <> na Primary Assembly 489461 na SCAF_112 unplaced-scaffold na na JAQMYR010000112.1 <> na Primary Assembly 484462 na SCAF_113 unplaced-scaffold na na JAQMYR010000113.1 <> na Primary Assembly 481934 na SCAF_114 unplaced-scaffold na na JAQMYR010000114.1 <> na Primary Assembly 477528 na SCAF_115 unplaced-scaffold na na JAQMYR010000115.1 <> na Primary Assembly 468665 na SCAF_116 unplaced-scaffold na na JAQMYR010000116.1 <> na Primary Assembly 468272 na SCAF_117 unplaced-scaffold na na JAQMYR010000117.1 <> na Primary Assembly 465814 na SCAF_118 unplaced-scaffold na na JAQMYR010000118.1 <> na Primary Assembly 459684 na SCAF_119 unplaced-scaffold na na JAQMYR010000119.1 <> na Primary Assembly 459279 na SCAF_120 unplaced-scaffold na na JAQMYR010000120.1 <> na Primary Assembly 454373 na SCAF_121 unplaced-scaffold na na JAQMYR010000121.1 <> na Primary Assembly 454029 na SCAF_122 unplaced-scaffold na na JAQMYR010000122.1 <> na Primary Assembly 449938 na SCAF_123 unplaced-scaffold na na JAQMYR010000123.1 <> na Primary Assembly 448342 na SCAF_124 unplaced-scaffold na na JAQMYR010000124.1 <> na Primary Assembly 447567 na SCAF_125 unplaced-scaffold na na JAQMYR010000125.1 <> na Primary Assembly 441967 na SCAF_126 unplaced-scaffold na na JAQMYR010000126.1 <> na Primary Assembly 436153 na SCAF_127 unplaced-scaffold na na JAQMYR010000127.1 <> na Primary Assembly 434691 na SCAF_128 unplaced-scaffold na na JAQMYR010000128.1 <> na Primary Assembly 429876 na SCAF_129 unplaced-scaffold na na JAQMYR010000129.1 <> na Primary Assembly 429793 na SCAF_130 unplaced-scaffold na na JAQMYR010000130.1 <> na Primary Assembly 429095 na SCAF_131 unplaced-scaffold na na JAQMYR010000131.1 <> na Primary Assembly 416356 na SCAF_132 unplaced-scaffold na na JAQMYR010000132.1 <> na Primary Assembly 415320 na SCAF_133 unplaced-scaffold na na JAQMYR010000133.1 <> na Primary Assembly 410740 na SCAF_134 unplaced-scaffold na na JAQMYR010000134.1 <> na Primary Assembly 410018 na SCAF_135 unplaced-scaffold na na JAQMYR010000135.1 <> na Primary Assembly 409615 na SCAF_136 unplaced-scaffold na na JAQMYR010000136.1 <> na Primary Assembly 408096 na SCAF_137 unplaced-scaffold na na JAQMYR010000137.1 <> na Primary Assembly 406401 na SCAF_138 unplaced-scaffold na na JAQMYR010000138.1 <> na Primary Assembly 405694 na SCAF_139 unplaced-scaffold na na JAQMYR010000139.1 <> na Primary Assembly 403960 na SCAF_140 unplaced-scaffold na na JAQMYR010000140.1 <> na Primary Assembly 402494 na SCAF_141 unplaced-scaffold na na JAQMYR010000141.1 <> na Primary Assembly 400459 na SCAF_142 unplaced-scaffold na na JAQMYR010000142.1 <> na Primary Assembly 395736 na SCAF_143 unplaced-scaffold na na JAQMYR010000143.1 <> na Primary Assembly 391868 na SCAF_144 unplaced-scaffold na na JAQMYR010000144.1 <> na Primary Assembly 391284 na SCAF_145 unplaced-scaffold na na JAQMYR010000145.1 <> na Primary Assembly 389903 na SCAF_146 unplaced-scaffold na na JAQMYR010000146.1 <> na Primary Assembly 389747 na SCAF_147 unplaced-scaffold na na JAQMYR010000147.1 <> na Primary Assembly 389585 na SCAF_148 unplaced-scaffold na na JAQMYR010000148.1 <> na Primary Assembly 379986 na SCAF_149 unplaced-scaffold na na JAQMYR010000149.1 <> na Primary Assembly 379393 na SCAF_150 unplaced-scaffold na na JAQMYR010000150.1 <> na Primary Assembly 376712 na SCAF_151 unplaced-scaffold na na JAQMYR010000151.1 <> na Primary Assembly 373588 na SCAF_152 unplaced-scaffold na na JAQMYR010000152.1 <> na Primary Assembly 371785 na SCAF_153 unplaced-scaffold na na JAQMYR010000153.1 <> na Primary Assembly 369233 na SCAF_154 unplaced-scaffold na na JAQMYR010000154.1 <> na Primary Assembly 367533 na SCAF_155 unplaced-scaffold na na JAQMYR010000155.1 <> na Primary Assembly 365152 na SCAF_156 unplaced-scaffold na na JAQMYR010000156.1 <> na Primary Assembly 364613 na SCAF_157 unplaced-scaffold na na JAQMYR010000157.1 <> na Primary Assembly 362661 na SCAF_158 unplaced-scaffold na na JAQMYR010000158.1 <> na Primary Assembly 362378 na SCAF_159 unplaced-scaffold na na JAQMYR010000159.1 <> na Primary Assembly 358022 na SCAF_160 unplaced-scaffold na na JAQMYR010000160.1 <> na Primary Assembly 357243 na SCAF_161 unplaced-scaffold na na JAQMYR010000161.1 <> na Primary Assembly 356455 na SCAF_162 unplaced-scaffold na na JAQMYR010000162.1 <> na Primary Assembly 348787 na SCAF_163 unplaced-scaffold na na JAQMYR010000163.1 <> na Primary Assembly 348760 na SCAF_164 unplaced-scaffold na na JAQMYR010000164.1 <> na Primary Assembly 347063 na SCAF_165 unplaced-scaffold na na JAQMYR010000165.1 <> na Primary Assembly 339686 na SCAF_166 unplaced-scaffold na na JAQMYR010000166.1 <> na Primary Assembly 339258 na SCAF_167 unplaced-scaffold na na JAQMYR010000167.1 <> na Primary Assembly 338952 na SCAF_168 unplaced-scaffold na na JAQMYR010000168.1 <> na Primary Assembly 337629 na SCAF_169 unplaced-scaffold na na JAQMYR010000169.1 <> na Primary Assembly 336279 na SCAF_170 unplaced-scaffold na na JAQMYR010000170.1 <> na Primary Assembly 335236 na SCAF_171 unplaced-scaffold na na JAQMYR010000171.1 <> na Primary Assembly 333410 na SCAF_172 unplaced-scaffold na na JAQMYR010000172.1 <> na Primary Assembly 333238 na SCAF_173 unplaced-scaffold na na JAQMYR010000173.1 <> na Primary Assembly 332727 na SCAF_174 unplaced-scaffold na na JAQMYR010000174.1 <> na Primary Assembly 331992 na SCAF_175 unplaced-scaffold na na JAQMYR010000175.1 <> na Primary Assembly 326972 na SCAF_176 unplaced-scaffold na na JAQMYR010000176.1 <> na Primary Assembly 323436 na SCAF_177 unplaced-scaffold na na JAQMYR010000177.1 <> na Primary Assembly 322874 na SCAF_178 unplaced-scaffold na na JAQMYR010000178.1 <> na Primary Assembly 318405 na SCAF_179 unplaced-scaffold na na JAQMYR010000179.1 <> na Primary Assembly 317084 na SCAF_180 unplaced-scaffold na na JAQMYR010000180.1 <> na Primary Assembly 316368 na SCAF_181 unplaced-scaffold na na JAQMYR010000181.1 <> na Primary Assembly 316098 na SCAF_182 unplaced-scaffold na na JAQMYR010000182.1 <> na Primary Assembly 310185 na SCAF_183 unplaced-scaffold na na JAQMYR010000183.1 <> na Primary Assembly 305997 na SCAF_184 unplaced-scaffold na na JAQMYR010000184.1 <> na Primary Assembly 302929 na SCAF_185 unplaced-scaffold na na JAQMYR010000185.1 <> na Primary Assembly 302479 na SCAF_186 unplaced-scaffold na na JAQMYR010000186.1 <> na Primary Assembly 301824 na SCAF_187 unplaced-scaffold na na JAQMYR010000187.1 <> na Primary Assembly 299387 na SCAF_188 unplaced-scaffold na na JAQMYR010000188.1 <> na Primary Assembly 297579 na SCAF_189 unplaced-scaffold na na JAQMYR010000189.1 <> na Primary Assembly 297234 na SCAF_190 unplaced-scaffold na na JAQMYR010000190.1 <> na Primary Assembly 296794 na SCAF_191 unplaced-scaffold na na JAQMYR010000191.1 <> na Primary Assembly 296512 na SCAF_192 unplaced-scaffold na na JAQMYR010000192.1 <> na Primary Assembly 295770 na SCAF_193 unplaced-scaffold na na JAQMYR010000193.1 <> na Primary Assembly 295711 na SCAF_194 unplaced-scaffold na na JAQMYR010000194.1 <> na Primary Assembly 295666 na SCAF_195 unplaced-scaffold na na JAQMYR010000195.1 <> na Primary Assembly 290246 na SCAF_196 unplaced-scaffold na na JAQMYR010000196.1 <> na Primary Assembly 290216 na SCAF_197 unplaced-scaffold na na JAQMYR010000197.1 <> na Primary Assembly 287992 na SCAF_198 unplaced-scaffold na na JAQMYR010000198.1 <> na Primary Assembly 284563 na SCAF_199 unplaced-scaffold na na JAQMYR010000199.1 <> na Primary Assembly 282826 na SCAF_200 unplaced-scaffold na na JAQMYR010000200.1 <> na Primary Assembly 282214 na SCAF_201 unplaced-scaffold na na JAQMYR010000201.1 <> na Primary Assembly 281602 na SCAF_202 unplaced-scaffold na na JAQMYR010000202.1 <> na Primary Assembly 281129 na SCAF_203 unplaced-scaffold na na JAQMYR010000203.1 <> na Primary Assembly 280478 na SCAF_204 unplaced-scaffold na na JAQMYR010000204.1 <> na Primary Assembly 280366 na SCAF_205 unplaced-scaffold na na JAQMYR010000205.1 <> na Primary Assembly 280019 na SCAF_206 unplaced-scaffold na na JAQMYR010000206.1 <> na Primary Assembly 279838 na SCAF_207 unplaced-scaffold na na JAQMYR010000207.1 <> na Primary Assembly 277105 na SCAF_208 unplaced-scaffold na na JAQMYR010000208.1 <> na Primary Assembly 276402 na SCAF_209 unplaced-scaffold na na JAQMYR010000209.1 <> na Primary Assembly 276358 na SCAF_210 unplaced-scaffold na na JAQMYR010000210.1 <> na Primary Assembly 273843 na SCAF_211 unplaced-scaffold na na JAQMYR010000211.1 <> na Primary Assembly 271987 na SCAF_212 unplaced-scaffold na na JAQMYR010000212.1 <> na Primary Assembly 271983 na SCAF_213 unplaced-scaffold na na JAQMYR010000213.1 <> na Primary Assembly 270683 na SCAF_214 unplaced-scaffold na na JAQMYR010000214.1 <> na Primary Assembly 268020 na SCAF_215 unplaced-scaffold na na JAQMYR010000215.1 <> na Primary Assembly 266075 na SCAF_216 unplaced-scaffold na na JAQMYR010000216.1 <> na Primary Assembly 265919 na SCAF_217 unplaced-scaffold na na JAQMYR010000217.1 <> na Primary Assembly 264964 na SCAF_218 unplaced-scaffold na na JAQMYR010000218.1 <> na Primary Assembly 264794 na SCAF_219 unplaced-scaffold na na JAQMYR010000219.1 <> na Primary Assembly 264171 na SCAF_220 unplaced-scaffold na na JAQMYR010000220.1 <> na Primary Assembly 263622 na SCAF_221 unplaced-scaffold na na JAQMYR010000221.1 <> na Primary Assembly 262930 na SCAF_222 unplaced-scaffold na na JAQMYR010000222.1 <> na Primary Assembly 261940 na SCAF_223 unplaced-scaffold na na JAQMYR010000223.1 <> na Primary Assembly 260857 na SCAF_224 unplaced-scaffold na na JAQMYR010000224.1 <> na Primary Assembly 260479 na SCAF_225 unplaced-scaffold na na JAQMYR010000225.1 <> na Primary Assembly 256387 na SCAF_226 unplaced-scaffold na na JAQMYR010000226.1 <> na Primary Assembly 256183 na SCAF_227 unplaced-scaffold na na JAQMYR010000227.1 <> na Primary Assembly 255819 na SCAF_228 unplaced-scaffold na na JAQMYR010000228.1 <> na Primary Assembly 255292 na SCAF_229 unplaced-scaffold na na JAQMYR010000229.1 <> na Primary Assembly 254443 na SCAF_230 unplaced-scaffold na na JAQMYR010000230.1 <> na Primary Assembly 252734 na SCAF_231 unplaced-scaffold na na JAQMYR010000231.1 <> na Primary Assembly 252491 na SCAF_232 unplaced-scaffold na na JAQMYR010000232.1 <> na Primary Assembly 251201 na SCAF_233 unplaced-scaffold na na JAQMYR010000233.1 <> na Primary Assembly 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31191 na SCAF_1222 unplaced-scaffold na na JAQMYR010001222.1 <> na Primary Assembly 31108 na SCAF_1223 unplaced-scaffold na na JAQMYR010001223.1 <> na Primary Assembly 31025 na SCAF_1224 unplaced-scaffold na na JAQMYR010001224.1 <> na Primary Assembly 30992 na SCAF_1225 unplaced-scaffold na na JAQMYR010001225.1 <> na Primary Assembly 30976 na SCAF_1226 unplaced-scaffold na na JAQMYR010001226.1 <> na Primary Assembly 30959 na SCAF_1227 unplaced-scaffold na na JAQMYR010001227.1 <> na Primary Assembly 30916 na SCAF_1228 unplaced-scaffold na na JAQMYR010001228.1 <> na Primary Assembly 30826 na SCAF_1229 unplaced-scaffold na na JAQMYR010001229.1 <> na Primary Assembly 30788 na SCAF_1230 unplaced-scaffold na na JAQMYR010001230.1 <> na Primary Assembly 30594 na SCAF_1231 unplaced-scaffold na na JAQMYR010001231.1 <> na Primary Assembly 30486 na SCAF_1232 unplaced-scaffold na na JAQMYR010001232.1 <> na Primary Assembly 30368 na SCAF_1233 unplaced-scaffold na na JAQMYR010001233.1 <> na Primary Assembly 30358 na SCAF_1234 unplaced-scaffold na na JAQMYR010001234.1 <> na Primary Assembly 30350 na SCAF_1235 unplaced-scaffold na na JAQMYR010001235.1 <> na Primary Assembly 30265 na SCAF_1236 unplaced-scaffold na na JAQMYR010001236.1 <> na Primary Assembly 30234 na SCAF_1237 unplaced-scaffold na na JAQMYR010001237.1 <> na Primary Assembly 30159 na SCAF_1238 unplaced-scaffold na na JAQMYR010001238.1 <> na Primary Assembly 30029 na SCAF_1239 unplaced-scaffold na na JAQMYR010001239.1 <> na Primary Assembly 30024 na SCAF_1240 unplaced-scaffold na na JAQMYR010001240.1 <> na Primary Assembly 30022 na SCAF_1241 unplaced-scaffold na na JAQMYR010001241.1 <> na Primary Assembly 29930 na SCAF_1242 unplaced-scaffold na na JAQMYR010001242.1 <> na Primary Assembly 29849 na SCAF_1243 unplaced-scaffold na na JAQMYR010001243.1 <> na Primary Assembly 29810 na SCAF_1244 unplaced-scaffold na na JAQMYR010001244.1 <> na Primary Assembly 29768 na SCAF_1245 unplaced-scaffold na na JAQMYR010001245.1 <> na Primary Assembly 29762 na SCAF_1246 unplaced-scaffold na na JAQMYR010001246.1 <> na Primary Assembly 29644 na SCAF_1247 unplaced-scaffold na na JAQMYR010001247.1 <> na Primary Assembly 29571 na SCAF_1248 unplaced-scaffold na na JAQMYR010001248.1 <> na Primary Assembly 29535 na SCAF_1249 unplaced-scaffold na na JAQMYR010001249.1 <> na Primary Assembly 29508 na SCAF_1250 unplaced-scaffold na na JAQMYR010001250.1 <> na Primary Assembly 29500 na SCAF_1251 unplaced-scaffold na na JAQMYR010001251.1 <> na Primary Assembly 29496 na SCAF_1252 unplaced-scaffold na na JAQMYR010001252.1 <> na Primary Assembly 29475 na SCAF_1253 unplaced-scaffold na na JAQMYR010001253.1 <> na Primary Assembly 29416 na SCAF_1254 unplaced-scaffold na na JAQMYR010001254.1 <> na Primary Assembly 29410 na SCAF_1255 unplaced-scaffold na na JAQMYR010001255.1 <> na Primary Assembly 29168 na SCAF_1256 unplaced-scaffold na na JAQMYR010001256.1 <> na Primary Assembly 29167 na SCAF_1257 unplaced-scaffold na na JAQMYR010001257.1 <> na Primary Assembly 29031 na SCAF_1258 unplaced-scaffold na na JAQMYR010001258.1 <> na Primary Assembly 28968 na SCAF_1259 unplaced-scaffold na na JAQMYR010001259.1 <> na Primary Assembly 28963 na SCAF_1260 unplaced-scaffold na na JAQMYR010001260.1 <> na Primary Assembly 28962 na SCAF_1261 unplaced-scaffold na na JAQMYR010001261.1 <> na Primary Assembly 28951 na SCAF_1262 unplaced-scaffold na na JAQMYR010001262.1 <> na Primary Assembly 28785 na SCAF_1263 unplaced-scaffold na na JAQMYR010001263.1 <> na Primary Assembly 28653 na SCAF_1264 unplaced-scaffold na na JAQMYR010001264.1 <> na Primary Assembly 28639 na SCAF_1265 unplaced-scaffold na na JAQMYR010001265.1 <> na Primary Assembly 28638 na SCAF_1266 unplaced-scaffold na na JAQMYR010001266.1 <> na Primary Assembly 28565 na SCAF_1267 unplaced-scaffold na na JAQMYR010001267.1 <> na Primary Assembly 28565 na SCAF_1268 unplaced-scaffold na na JAQMYR010001268.1 <> na Primary Assembly 28541 na SCAF_1269 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26657 na SCAF_1293 unplaced-scaffold na na JAQMYR010001293.1 <> na Primary Assembly 26657 na SCAF_1294 unplaced-scaffold na na JAQMYR010001294.1 <> na Primary Assembly 26465 na SCAF_1295 unplaced-scaffold na na JAQMYR010001295.1 <> na Primary Assembly 26356 na SCAF_1296 unplaced-scaffold na na JAQMYR010001296.1 <> na Primary Assembly 26224 na SCAF_1297 unplaced-scaffold na na JAQMYR010001297.1 <> na Primary Assembly 26190 na SCAF_1298 unplaced-scaffold na na JAQMYR010001298.1 <> na Primary Assembly 26071 na SCAF_1299 unplaced-scaffold na na JAQMYR010001299.1 <> na Primary Assembly 25845 na SCAF_1300 unplaced-scaffold na na JAQMYR010001300.1 <> na Primary Assembly 25805 na SCAF_1301 unplaced-scaffold na na JAQMYR010001301.1 <> na Primary Assembly 25727 na SCAF_1302 unplaced-scaffold na na JAQMYR010001302.1 <> na Primary Assembly 25688 na SCAF_1303 unplaced-scaffold na na JAQMYR010001303.1 <> na Primary Assembly 25648 na SCAF_1304 unplaced-scaffold na na JAQMYR010001304.1 <> na Primary Assembly 25621 na SCAF_1305 unplaced-scaffold na na JAQMYR010001305.1 <> na Primary Assembly 25612 na SCAF_1306 unplaced-scaffold na na JAQMYR010001306.1 <> na Primary Assembly 25546 na SCAF_1307 unplaced-scaffold na na JAQMYR010001307.1 <> na Primary Assembly 25507 na SCAF_1308 unplaced-scaffold na na JAQMYR010001308.1 <> na Primary Assembly 25493 na SCAF_1309 unplaced-scaffold na na JAQMYR010001309.1 <> na Primary Assembly 25414 na SCAF_1310 unplaced-scaffold na na JAQMYR010001310.1 <> na Primary Assembly 25323 na SCAF_1311 unplaced-scaffold na na JAQMYR010001311.1 <> na Primary Assembly 25230 na SCAF_1312 unplaced-scaffold na na JAQMYR010001312.1 <> na Primary Assembly 25216 na SCAF_1313 unplaced-scaffold na na JAQMYR010001313.1 <> na Primary Assembly 25178 na SCAF_1314 unplaced-scaffold na na JAQMYR010001314.1 <> na Primary Assembly 24779 na SCAF_1315 unplaced-scaffold na na JAQMYR010001315.1 <> na Primary Assembly 24587 na SCAF_1316 unplaced-scaffold na na JAQMYR010001316.1 <> na Primary Assembly 24572 na SCAF_1317 unplaced-scaffold na na JAQMYR010001317.1 <> na Primary Assembly 24558 na SCAF_1318 unplaced-scaffold na na JAQMYR010001318.1 <> na Primary Assembly 24532 na SCAF_1319 unplaced-scaffold na na JAQMYR010001319.1 <> na Primary Assembly 24525 na SCAF_1320 unplaced-scaffold na na JAQMYR010001320.1 <> na Primary Assembly 24447 na SCAF_1321 unplaced-scaffold na na JAQMYR010001321.1 <> na Primary Assembly 24229 na SCAF_1322 unplaced-scaffold na na JAQMYR010001322.1 <> na Primary Assembly 24114 na SCAF_1323 unplaced-scaffold na na JAQMYR010001323.1 <> na Primary Assembly 24038 na SCAF_1324 unplaced-scaffold na na JAQMYR010001324.1 <> na Primary Assembly 23969 na SCAF_1325 unplaced-scaffold na na JAQMYR010001325.1 <> na Primary Assembly 23902 na SCAF_1326 unplaced-scaffold na na JAQMYR010001326.1 <> na Primary Assembly 23883 na SCAF_1327 unplaced-scaffold na na JAQMYR010001327.1 <> na Primary Assembly 23833 na SCAF_1328 unplaced-scaffold na na JAQMYR010001328.1 <> na Primary Assembly 23829 na SCAF_1329 unplaced-scaffold na na JAQMYR010001329.1 <> na Primary Assembly 23608 na SCAF_1330 unplaced-scaffold na na JAQMYR010001330.1 <> na Primary Assembly 23540 na SCAF_1331 unplaced-scaffold na na JAQMYR010001331.1 <> na Primary Assembly 23536 na SCAF_1332 unplaced-scaffold na na JAQMYR010001332.1 <> na Primary Assembly 23472 na SCAF_1333 unplaced-scaffold na na JAQMYR010001333.1 <> na Primary Assembly 23405 na SCAF_1334 unplaced-scaffold na na JAQMYR010001334.1 <> na Primary Assembly 23153 na SCAF_1335 unplaced-scaffold na na JAQMYR010001335.1 <> na Primary Assembly 23147 na SCAF_1336 unplaced-scaffold na na JAQMYR010001336.1 <> na Primary Assembly 22888 na SCAF_1337 unplaced-scaffold na na JAQMYR010001337.1 <> na Primary Assembly 22747 na SCAF_1338 unplaced-scaffold na na JAQMYR010001338.1 <> na Primary Assembly 22689 na SCAF_1339 unplaced-scaffold na na JAQMYR010001339.1 <> na Primary Assembly 22109 na SCAF_1340 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SCAF_1352 unplaced-scaffold na na JAQMYR010001352.1 <> na Primary Assembly 20421 na SCAF_1353 unplaced-scaffold na na JAQMYR010001353.1 <> na Primary Assembly 20002 na SCAF_1354 unplaced-scaffold na na JAQMYR010001354.1 <> na Primary Assembly 19844 na SCAF_1355 unplaced-scaffold na na JAQMYR010001355.1 <> na Primary Assembly 19835 na SCAF_1356 unplaced-scaffold na na JAQMYR010001356.1 <> na Primary Assembly 19402 na SCAF_1357 unplaced-scaffold na na JAQMYR010001357.1 <> na Primary Assembly 19395 na SCAF_1358 unplaced-scaffold na na JAQMYR010001358.1 <> na Primary Assembly 19330 na SCAF_1359 unplaced-scaffold na na JAQMYR010001359.1 <> na Primary Assembly 19316 na SCAF_1360 unplaced-scaffold na na JAQMYR010001360.1 <> na Primary Assembly 19293 na SCAF_1361 unplaced-scaffold na na JAQMYR010001361.1 <> na Primary Assembly 19256 na SCAF_1362 unplaced-scaffold na na JAQMYR010001362.1 <> na Primary Assembly 19232 na SCAF_1363 unplaced-scaffold na na JAQMYR010001363.1 <> na Primary Assembly 19156 na SCAF_1364 unplaced-scaffold na na JAQMYR010001364.1 <> na Primary Assembly 18974 na SCAF_1365 unplaced-scaffold na na JAQMYR010001365.1 <> na Primary Assembly 18875 na SCAF_1366 unplaced-scaffold na na JAQMYR010001366.1 <> na Primary Assembly 18745 na SCAF_1367 unplaced-scaffold na na JAQMYR010001367.1 <> na Primary Assembly 18640 na SCAF_1368 unplaced-scaffold na na JAQMYR010001368.1 <> na Primary Assembly 18392 na SCAF_1369 unplaced-scaffold na na JAQMYR010001369.1 <> na Primary Assembly 18308 na SCAF_1370 unplaced-scaffold na na JAQMYR010001370.1 <> na Primary Assembly 18241 na SCAF_1371 unplaced-scaffold na na JAQMYR010001371.1 <> na Primary Assembly 18227 na SCAF_1372 unplaced-scaffold na na JAQMYR010001372.1 <> na Primary Assembly 18180 na SCAF_1373 unplaced-scaffold na na JAQMYR010001373.1 <> na Primary Assembly 17693 na SCAF_1374 unplaced-scaffold na na JAQMYR010001374.1 <> na Primary Assembly 17118 na SCAF_1375 unplaced-scaffold na na JAQMYR010001375.1 <> na Primary Assembly 16628 na SCAF_1376 unplaced-scaffold na na JAQMYR010001376.1 <> na Primary Assembly 16343 na SCAF_1377 unplaced-scaffold na na JAQMYR010001377.1 <> na Primary Assembly 16267 na SCAF_1378 unplaced-scaffold na na JAQMYR010001378.1 <> na Primary Assembly 16204 na SCAF_1379 unplaced-scaffold na na JAQMYR010001379.1 <> na Primary Assembly 16115 na SCAF_1380 unplaced-scaffold na na JAQMYR010001380.1 <> na Primary Assembly 16060 na SCAF_1381 unplaced-scaffold na na JAQMYR010001381.1 <> na Primary Assembly 15972 na SCAF_1382 unplaced-scaffold na na JAQMYR010001382.1 <> na Primary Assembly 15956 na SCAF_1383 unplaced-scaffold na na JAQMYR010001383.1 <> na Primary Assembly 15675 na SCAF_1384 unplaced-scaffold na na JAQMYR010001384.1 <> na Primary Assembly 14538 na SCAF_1385 unplaced-scaffold na na JAQMYR010001385.1 <> na Primary Assembly 14356 na SCAF_1386 unplaced-scaffold na na JAQMYR010001386.1 <> na Primary Assembly 14302 na SCAF_1387 unplaced-scaffold na na JAQMYR010001387.1 <> na Primary Assembly 13907 na SCAF_1388 unplaced-scaffold na na JAQMYR010001388.1 <> na Primary Assembly 13296 na SCAF_1389 unplaced-scaffold na na JAQMYR010001389.1 <> na Primary Assembly 12358 na SCAF_1390 unplaced-scaffold na na JAQMYR010001390.1 <> na Primary Assembly 11328 na SCAF_1391 unplaced-scaffold na na JAQMYR010001391.1 <> na Primary Assembly 11267 na SCAF_1392 unplaced-scaffold na na JAQMYR010001392.1 <> na Primary Assembly 10115 na mtDNA unlocalized-scaffold MT Mitochondrion JAQMYR010001393.1 <> na non-nuclear 18021 na