# Assembly name:  NHGRI_mPonPyg2-v2.0_alt
# Organism name:  Pongo pygmaeus (Bornean orangutan)
# Isolate:  AG05252
# Sex:  male
# Taxid:          9600
# BioSample:      SAMN10521809
# BioProject:     PRJNA916740
# Submitter:      National Human Genome Research Institute, National Institutes of Health
# Date:           2024-01-08
# Assembly type:  alternate-pseudohaplotype
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JAQQLT02
# Assembly method: Verkko v. 1.4
# Expected final version: no
# Genome coverage: 54.0x
# Sequencing technology: PacBio Sequel; Oxford Nanopore PromethION
# GenBank assembly accession: GCA_028885525.2
# Linked assembly: GCA_028885625.2 (principal pseudohaplotype of diploid)
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_028885535.2		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
chr1_hap2_hsa1	assembled-molecule	1	Chromosome	CM054607.2	<>	na	Primary Assembly	230991892	na
chr2_hap2_hsa3	assembled-molecule	2	Chromosome	CM068909.1	<>	na	Primary Assembly	209245459	na
chr3_hap2_hsa4	assembled-molecule	3	Chromosome	CM054610.2	<>	na	Primary Assembly	203539384	na
chr4_hap2_hsa5	assembled-molecule	4	Chromosome	CM054611.2	<>	na	Primary Assembly	183842348	na
chr5_hap2_hsa6	assembled-molecule	5	Chromosome	CM054612.2	<>	na	Primary Assembly	172531923	na
chr6_hap2_hsa7	assembled-molecule	6	Chromosome	CM054613.2	<>	na	Primary Assembly	159277899	na
chr7_hap2_hsa8	assembled-molecule	7	Chromosome	CM054614.2	<>	na	Primary Assembly	158832430	na
chr8_hap2_hsa10	assembled-molecule	8	Chromosome	CM054615.2	<>	na	Primary Assembly	137913290	na
chr9_hap2_hsa11	assembled-molecule	9	Chromosome	CM054616.2	<>	na	Primary Assembly	140580864	na
chr10_hap2_hsa12	assembled-molecule	10	Chromosome	CM054617.2	<>	na	Primary Assembly	135492682	na
chr11_hap2_hsa2b	assembled-molecule	11	Chromosome	CM054618.2	<>	na	Primary Assembly	141980120	na
chr12_hap2_hsa2a	assembled-molecule	12	Chromosome	CM054619.2	<>	na	Primary Assembly	137696483	na
chr13_hap2_hsa9	assembled-molecule	13	Chromosome	CM054620.2	<>	na	Primary Assembly	129318742	na
chr14_hap2_hsa13	assembled-molecule	14	Chromosome	CM054621.2	<>	na	Primary Assembly	121934749	na
chr15_hap2_hsa14	assembled-molecule	15	Chromosome	CM054622.2	<>	na	Primary Assembly	107060260	na
chr16_hap2_hsa15	assembled-molecule	16	Chromosome	CM054623.2	<>	na	Primary Assembly	109691975	na
chr17_hap2_hsa18	assembled-molecule	17	Chromosome	CM054624.2	<>	na	Primary Assembly	98348472	na
chr18_hap2_hsa16	assembled-molecule	18	Chromosome	CM054625.2	<>	na	Primary Assembly	87924504	na
chr19_hap2_hsa17	assembled-molecule	19	Chromosome	CM054626.2	<>	na	Primary Assembly	97885731	na
chr20_hap2_hsa19	assembled-molecule	20	Chromosome	CM054627.2	<>	na	Primary Assembly	62950346	na
chr21_hap2_hsa20	assembled-molecule	21	Chromosome	CM054628.2	<>	na	Primary Assembly	65946565	na
chr22_hap2_hsa21	assembled-molecule	22	Chromosome	CM054629.2	<>	na	Primary Assembly	58899425	na
chr23_hap2_hsa22	assembled-molecule	23	Chromosome	CM068910.1	<>	na	Primary Assembly	53688005	na
chr9_hap2_hsa11_random_utig4-828	unlocalized-scaffold	9	Chromosome	JAQQLT020000010.1	<>	na	Primary Assembly	56896	na
chr9_hap2_hsa11_random_utig4-830	unlocalized-scaffold	9	Chromosome	JAQQLT020000011.1	<>	na	Primary Assembly	52037	na
chr9_hap2_hsa11_random_utig4-832	unlocalized-scaffold	9	Chromosome	JAQQLT020000012.1	<>	na	Primary Assembly	161911	na
chr9_hap2_hsa11_random_utig4-838	unlocalized-scaffold	9	Chromosome	JAQQLT020000013.1	<>	na	Primary Assembly	77162	na
chr9_hap2_hsa11_random_utig4-901	unlocalized-scaffold	9	Chromosome	JAQQLT020000014.1	<>	na	Primary Assembly	130989	na
chr9_hap2_hsa11_random_utig4-905	unlocalized-scaffold	9	Chromosome	JAQQLT020000015.1	<>	na	Primary Assembly	45921	na
chr9_hap2_hsa11_random_utig4-1961	unlocalized-scaffold	9	Chromosome	JAQQLT020000016.1	<>	na	Primary Assembly	33434	na
chr9_hap2_hsa11_random_utig4-2776	unlocalized-scaffold	9	Chromosome	JAQQLT020000017.1	<>	na	Primary Assembly	72736	na
chr9_hap2_hsa11_random_utig4-3431	unlocalized-scaffold	9	Chromosome	JAQQLT020000018.1	<>	na	Primary Assembly	68006	na
chr119_hap2_hsa2b11_random_utig4-3201	unplaced-scaffold	na	na	JAQQLT020000033.1	<>	na	Primary Assembly	863521	na