track wfmash
mouseOverField name
type bigChain
longLabel wfmash v0.13.0 16-way chain
superTrack on show
priority 201
group compGeno
visibility hide
shortLabel WFMASH

track wfmashCHM13
mouseOverField name
type bigChain hs1
longLabel CHM13v2.0 to mPonPyg2_v2.0
otherDb hs1
parent wfmash
bigDataUrl contrib/T2TPrimates/CHM13_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 201
otherTwoBitUrl https://s3-us-west-2.amazonaws.com/human-pangenomics/T2T/browser/CHM13/chm13v2.0.2bit
linkDataUrl contrib/T2TPrimates/CHM13_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel CHM13
visibility dense

track wfmashGRCh38
mouseOverField name
type bigChain hg38
longLabel GRCh38 to mPonPyg2_v2.0
otherDb hg38
parent wfmash
bigDataUrl contrib/T2TPrimates/GRCh38_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 203
otherTwoBitUrl https://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/hg38.2bit
linkDataUrl contrib/T2TPrimates/GRCh38_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel GRCh38
visibility hide

track wfmashmGorGor1mat
mouseOverField name
type bigChain GCA_028885495.2
longLabel mGorGor1_v2.0 mat to mPonPyg2_v2.0
otherDb GCA_028885495.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mGorGor1mat_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Gorilla_gorilla/mGorGor1/assembly_curated/mGorGor1_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mGorGor1mat_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mGorGor1#mat
visibility hide

track wfmashmGorGor1pat
mouseOverField name
type bigChain GCA_028885475.2
longLabel mGorGor1_v2.0 pat to mPonPyg2_v2.0
otherDb GCA_028885475.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mGorGor1pat_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Gorilla_gorilla/mGorGor1/assembly_curated/mGorGor1_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mGorGor1pat_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mGorGor1#pat
visibility hide

track wfmashmPanPan1mat
mouseOverField name
type bigChain GCA_028858845.2
longLabel mPanPan1_v2.0 mat to mPonPyg2_v2.0
otherDb GCA_028858845.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mPanPan1mat_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Pan_paniscus/mPanPan1/assembly_curated/mPanPan1_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mPanPan1mat_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mPanPan1#mat
visibility hide

track wfmashmPanPan1pat
mouseOverField name
type bigChain GCA_028858825.2
longLabel mPanPan1_v2.0 pat to mPonPyg2_v2.0
otherDb GCA_028858825.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mPanPan1pat_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Pan_paniscus/mPanPan1/assembly_curated/mPanPan1_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mPanPan1pat_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mPanPan1#pat
visibility hide

track wfmashmPanTro3hap1
mouseOverField name
type bigChain GCF_028858775.2
longLabel mPanTro3_v2.0 hap1 to mPonPyg2_v2.0
otherDb GCF_028858775.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mPanTro3hap1_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Pan_troglodytes/mPanTro3/assembly_curated/mPanTro3_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mPanTro3hap1_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mPanTro3#hap1
visibility hide

track wfmashmPanTro3hap2
mouseOverField name
type bigChain GCA_028858805.2
longLabel mPanTro3_v2.0 hap2 to mPonPyg2_v2.0
otherDb GCA_028858805.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mPanTro3hap2_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Pan_troglodytes/mPanTro3/assembly_curated/mPanTro3_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mPanTro3hap2_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mPanTro3#hap2
visibility hide

track wfmashmPonAbe1hap1
mouseOverField name
type bigChain GCF_028885655.2
longLabel mPonAbe1_v2.0 hap1 to mPonPyg2_v2.0
otherDb GCF_028885655.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mPonAbe1hap1_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Pongo_abelii/mPonAbe1/assembly_curated/mPonAbe1_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mPonAbe1hap1_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mPonAbe1#hap1
visibility hide

track wfmashmPonAbe1hap2
mouseOverField name
type bigChain GCA_028885685.2
longLabel mPonAbe1_v2.0 hap2 to mPonPyg2_v2.0
otherDb GCA_028885685.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mPonAbe1hap2_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Pongo_abelii/mPonAbe1/assembly_curated/mPonAbe1_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mPonAbe1hap2_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mPonAbe1#hap2
visibility hide

track wfmashmPonPyg2hap1
mouseOverField name
type bigChain GCF_028885625.2
longLabel mPonPyg2_v2.0 hap1 to mPonPyg2_v2.0
otherDb GCF_028885625.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mPonPyg2hap1_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Pongo_pygmaeus/mPonPyg2/assembly_curated/mPonPyg2_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mPonPyg2hap1_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mPonPyg2#hap1
visibility hide

track wfmashmPonPyg2hap2
mouseOverField name
type bigChain GCA_028885525.2
longLabel mPonPyg2_v2.0 hap2 to mPonPyg2_v2.0
otherDb GCA_028885525.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mPonPyg2hap2_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Pongo_pygmaeus/mPonPyg2/assembly_curated/mPonPyg2_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mPonPyg2hap2_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mPonPyg2#hap2
visibility hide

track wfmashmSymSyn1hap1
mouseOverField name
type bigChain GCA_028878055.2
longLabel mSymSyn1_v2.0 hap1 to mPonPyg2_v2.0
otherDb GCA_028878055.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mSymSyn1hap1_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Symphalangus_syndactylus/mSymSyn1/assembly_curated/mSymSyn1_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mSymSyn1hap1_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mSymSyn1#hap1
visibility hide

track wfmashmSymSyn1hap2
mouseOverField name
type bigChain GCA_028878085.2
longLabel mSymSyn1_v2.0 hap2 to mPonPyg2_v2.0
otherDb GCA_028878085.2
parent wfmash
bigDataUrl contrib/T2TPrimates/mSymSyn1hap2_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.bb
priority 204
otherTwoBitUrl https://genomeark.s3.amazonaws.com/species/Symphalangus_syndactylus/mSymSyn1/assembly_curated/mSymSyn1_v2.0.2bit
linkDataUrl contrib/T2TPrimates/mSymSyn1hap2_to_mPonPyg2_v2.0.wfmash_v0.13.0.bigChain.link.bb
group compGeno
shortLabel mSymSyn1#hap2
visibility hide

track wfmashHPRCy1
mouseOverField name
type bigChain
longLabel wfmash v0.13.0 HPRCy1
superTrack on
priority 230
html contrib/T2TPrimates/wfmash.html
group compGeno
visibility hide
shortLabel WFMASH-HPRCy1

track wfmashHPRCy1HG002hap1
mouseOverField name
type bigChain HG002_hap1
longLabel HPRCy1 HG002 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG002hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 231
linkDataUrl contrib/T2TPrimates/HG002hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG002#hap1
visibility hide

track wfmashHPRCy1HG002hap2
mouseOverField name
type bigChain HG002_hap2
longLabel HPRCy1 HG002 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG002hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 232
linkDataUrl contrib/T2TPrimates/HG002hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG002#hap2
visibility hide

track wfmashHPRCy1HG00438hap1
mouseOverField name
type bigChain HG00438_hap1
longLabel HPRCy1 HG00438 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00438hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 233
linkDataUrl contrib/T2TPrimates/HG00438hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00438#hap1
visibility hide

track wfmashHPRCy1HG00438hap2
mouseOverField name
type bigChain HG00438_hap2
longLabel HPRCy1 HG00438 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00438hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 234
linkDataUrl contrib/T2TPrimates/HG00438hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00438#hap2
visibility hide

track wfmashHPRCy1HG005hap1
mouseOverField name
type bigChain HG005_hap1
longLabel HPRCy1 HG005 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG005hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 235
linkDataUrl contrib/T2TPrimates/HG005hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG005#hap1
visibility hide

track wfmashHPRCy1HG005hap2
mouseOverField name
type bigChain HG005_hap2
longLabel HPRCy1 HG005 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG005hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 236
linkDataUrl contrib/T2TPrimates/HG005hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG005#hap2
visibility hide

track wfmashHPRCy1HG00621hap1
mouseOverField name
type bigChain HG00621_hap1
longLabel HPRCy1 HG00621 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00621hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 237
linkDataUrl contrib/T2TPrimates/HG00621hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00621#hap1
visibility hide

track wfmashHPRCy1HG00621hap2
mouseOverField name
type bigChain HG00621_hap2
longLabel HPRCy1 HG00621 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00621hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 238
linkDataUrl contrib/T2TPrimates/HG00621hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00621#hap2
visibility hide

track wfmashHPRCy1HG00673hap1
mouseOverField name
type bigChain HG00673_hap1
longLabel HPRCy1 HG00673 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00673hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 239
linkDataUrl contrib/T2TPrimates/HG00673hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00673#hap1
visibility hide

track wfmashHPRCy1HG00673hap2
mouseOverField name
type bigChain HG00673_hap2
longLabel HPRCy1 HG00673 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00673hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 240
linkDataUrl contrib/T2TPrimates/HG00673hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00673#hap2
visibility hide

track wfmashHPRCy1HG00733hap1
mouseOverField name
type bigChain HG00733_hap1
longLabel HPRCy1 HG00733 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00733hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 241
linkDataUrl contrib/T2TPrimates/HG00733hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00733#hap1
visibility hide

track wfmashHPRCy1HG00733hap2
mouseOverField name
type bigChain HG00733_hap2
longLabel HPRCy1 HG00733 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00733hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 242
linkDataUrl contrib/T2TPrimates/HG00733hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00733#hap2
visibility hide

track wfmashHPRCy1HG00735hap1
mouseOverField name
type bigChain HG00735_hap1
longLabel HPRCy1 HG00735 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00735hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 243
linkDataUrl contrib/T2TPrimates/HG00735hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00735#hap1
visibility hide

track wfmashHPRCy1HG00735hap2
mouseOverField name
type bigChain HG00735_hap2
longLabel HPRCy1 HG00735 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00735hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 244
linkDataUrl contrib/T2TPrimates/HG00735hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00735#hap2
visibility hide

track wfmashHPRCy1HG00741hap1
mouseOverField name
type bigChain HG00741_hap1
longLabel HPRCy1 HG00741 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00741hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 245
linkDataUrl contrib/T2TPrimates/HG00741hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00741#hap1
visibility hide

track wfmashHPRCy1HG00741hap2
mouseOverField name
type bigChain HG00741_hap2
longLabel HPRCy1 HG00741 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG00741hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 246
linkDataUrl contrib/T2TPrimates/HG00741hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG00741#hap2
visibility hide

track wfmashHPRCy1HG01071hap1
mouseOverField name
type bigChain HG01071_hap1
longLabel HPRCy1 HG01071 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01071hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 247
linkDataUrl contrib/T2TPrimates/HG01071hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01071#hap1
visibility hide

track wfmashHPRCy1HG01071hap2
mouseOverField name
type bigChain HG01071_hap2
longLabel HPRCy1 HG01071 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01071hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 248
linkDataUrl contrib/T2TPrimates/HG01071hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01071#hap2
visibility hide

track wfmashHPRCy1HG01106hap1
mouseOverField name
type bigChain HG01106_hap1
longLabel HPRCy1 HG01106 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01106hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 249
linkDataUrl contrib/T2TPrimates/HG01106hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01106#hap1
visibility hide

track wfmashHPRCy1HG01106hap2
mouseOverField name
type bigChain HG01106_hap2
longLabel HPRCy1 HG01106 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01106hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 250
linkDataUrl contrib/T2TPrimates/HG01106hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01106#hap2
visibility hide

track wfmashHPRCy1HG01109hap1
mouseOverField name
type bigChain HG01109_hap1
longLabel HPRCy1 HG01109 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01109hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 251
linkDataUrl contrib/T2TPrimates/HG01109hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01109#hap1
visibility hide

track wfmashHPRCy1HG01109hap2
mouseOverField name
type bigChain HG01109_hap2
longLabel HPRCy1 HG01109 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01109hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 252
linkDataUrl contrib/T2TPrimates/HG01109hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01109#hap2
visibility hide

track wfmashHPRCy1HG01123hap1
mouseOverField name
type bigChain HG01123_hap1
longLabel HPRCy1 HG01123 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01123hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 253
linkDataUrl contrib/T2TPrimates/HG01123hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01123#hap1
visibility hide

track wfmashHPRCy1HG01123hap2
mouseOverField name
type bigChain HG01123_hap2
longLabel HPRCy1 HG01123 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01123hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 254
linkDataUrl contrib/T2TPrimates/HG01123hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01123#hap2
visibility hide

track wfmashHPRCy1HG01175hap1
mouseOverField name
type bigChain HG01175_hap1
longLabel HPRCy1 HG01175 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01175hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 255
linkDataUrl contrib/T2TPrimates/HG01175hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01175#hap1
visibility hide

track wfmashHPRCy1HG01175hap2
mouseOverField name
type bigChain HG01175_hap2
longLabel HPRCy1 HG01175 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01175hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 256
linkDataUrl contrib/T2TPrimates/HG01175hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01175#hap2
visibility hide

track wfmashHPRCy1HG01243hap1
mouseOverField name
type bigChain HG01243_hap1
longLabel HPRCy1 HG01243 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01243hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 257
linkDataUrl contrib/T2TPrimates/HG01243hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01243#hap1
visibility hide

track wfmashHPRCy1HG01243hap2
mouseOverField name
type bigChain HG01243_hap2
longLabel HPRCy1 HG01243 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01243hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 258
linkDataUrl contrib/T2TPrimates/HG01243hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01243#hap2
visibility hide

track wfmashHPRCy1HG01258hap1
mouseOverField name
type bigChain HG01258_hap1
longLabel HPRCy1 HG01258 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01258hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 259
linkDataUrl contrib/T2TPrimates/HG01258hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01258#hap1
visibility hide

track wfmashHPRCy1HG01258hap2
mouseOverField name
type bigChain HG01258_hap2
longLabel HPRCy1 HG01258 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01258hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 260
linkDataUrl contrib/T2TPrimates/HG01258hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01258#hap2
visibility hide

track wfmashHPRCy1HG01358hap1
mouseOverField name
type bigChain HG01358_hap1
longLabel HPRCy1 HG01358 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01358hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 261
linkDataUrl contrib/T2TPrimates/HG01358hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01358#hap1
visibility hide

track wfmashHPRCy1HG01358hap2
mouseOverField name
type bigChain HG01358_hap2
longLabel HPRCy1 HG01358 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01358hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 262
linkDataUrl contrib/T2TPrimates/HG01358hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01358#hap2
visibility hide

track wfmashHPRCy1HG01361hap1
mouseOverField name
type bigChain HG01361_hap1
longLabel HPRCy1 HG01361 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01361hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 263
linkDataUrl contrib/T2TPrimates/HG01361hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01361#hap1
visibility hide

track wfmashHPRCy1HG01361hap2
mouseOverField name
type bigChain HG01361_hap2
longLabel HPRCy1 HG01361 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01361hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 264
linkDataUrl contrib/T2TPrimates/HG01361hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01361#hap2
visibility hide

track wfmashHPRCy1HG01891hap1
mouseOverField name
type bigChain HG01891_hap1
longLabel HPRCy1 HG01891 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01891hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 265
linkDataUrl contrib/T2TPrimates/HG01891hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01891#hap1
visibility hide

track wfmashHPRCy1HG01891hap2
mouseOverField name
type bigChain HG01891_hap2
longLabel HPRCy1 HG01891 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01891hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 266
linkDataUrl contrib/T2TPrimates/HG01891hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01891#hap2
visibility hide

track wfmashHPRCy1HG01928hap1
mouseOverField name
type bigChain HG01928_hap1
longLabel HPRCy1 HG01928 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01928hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 267
linkDataUrl contrib/T2TPrimates/HG01928hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01928#hap1
visibility hide

track wfmashHPRCy1HG01928hap2
mouseOverField name
type bigChain HG01928_hap2
longLabel HPRCy1 HG01928 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01928hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 268
linkDataUrl contrib/T2TPrimates/HG01928hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01928#hap2
visibility hide

track wfmashHPRCy1HG01952hap1
mouseOverField name
type bigChain HG01952_hap1
longLabel HPRCy1 HG01952 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01952hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 269
linkDataUrl contrib/T2TPrimates/HG01952hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01952#hap1
visibility hide

track wfmashHPRCy1HG01952hap2
mouseOverField name
type bigChain HG01952_hap2
longLabel HPRCy1 HG01952 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01952hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 270
linkDataUrl contrib/T2TPrimates/HG01952hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01952#hap2
visibility hide

track wfmashHPRCy1HG01978hap1
mouseOverField name
type bigChain HG01978_hap1
longLabel HPRCy1 HG01978 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01978hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 271
linkDataUrl contrib/T2TPrimates/HG01978hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01978#hap1
visibility hide

track wfmashHPRCy1HG01978hap2
mouseOverField name
type bigChain HG01978_hap2
longLabel HPRCy1 HG01978 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG01978hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 272
linkDataUrl contrib/T2TPrimates/HG01978hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG01978#hap2
visibility hide

track wfmashHPRCy1HG02055hap1
mouseOverField name
type bigChain HG02055_hap1
longLabel HPRCy1 HG02055 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02055hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 273
linkDataUrl contrib/T2TPrimates/HG02055hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02055#hap1
visibility hide

track wfmashHPRCy1HG02055hap2
mouseOverField name
type bigChain HG02055_hap2
longLabel HPRCy1 HG02055 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02055hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 274
linkDataUrl contrib/T2TPrimates/HG02055hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02055#hap2
visibility hide

track wfmashHPRCy1HG02080hap1
mouseOverField name
type bigChain HG02080_hap1
longLabel HPRCy1 HG02080 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02080hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 275
linkDataUrl contrib/T2TPrimates/HG02080hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02080#hap1
visibility hide

track wfmashHPRCy1HG02080hap2
mouseOverField name
type bigChain HG02080_hap2
longLabel HPRCy1 HG02080 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02080hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 276
linkDataUrl contrib/T2TPrimates/HG02080hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02080#hap2
visibility hide

track wfmashHPRCy1HG02109hap1
mouseOverField name
type bigChain HG02109_hap1
longLabel HPRCy1 HG02109 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02109hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 277
linkDataUrl contrib/T2TPrimates/HG02109hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02109#hap1
visibility hide

track wfmashHPRCy1HG02109hap2
mouseOverField name
type bigChain HG02109_hap2
longLabel HPRCy1 HG02109 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02109hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 278
linkDataUrl contrib/T2TPrimates/HG02109hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02109#hap2
visibility hide

track wfmashHPRCy1HG02145hap1
mouseOverField name
type bigChain HG02145_hap1
longLabel HPRCy1 HG02145 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02145hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 279
linkDataUrl contrib/T2TPrimates/HG02145hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02145#hap1
visibility hide

track wfmashHPRCy1HG02145hap2
mouseOverField name
type bigChain HG02145_hap2
longLabel HPRCy1 HG02145 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02145hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 280
linkDataUrl contrib/T2TPrimates/HG02145hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02145#hap2
visibility hide

track wfmashHPRCy1HG02148hap1
mouseOverField name
type bigChain HG02148_hap1
longLabel HPRCy1 HG02148 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02148hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 281
linkDataUrl contrib/T2TPrimates/HG02148hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02148#hap1
visibility hide

track wfmashHPRCy1HG02148hap2
mouseOverField name
type bigChain HG02148_hap2
longLabel HPRCy1 HG02148 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02148hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 282
linkDataUrl contrib/T2TPrimates/HG02148hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02148#hap2
visibility hide

track wfmashHPRCy1HG02257hap1
mouseOverField name
type bigChain HG02257_hap1
longLabel HPRCy1 HG02257 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02257hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 283
linkDataUrl contrib/T2TPrimates/HG02257hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02257#hap1
visibility hide

track wfmashHPRCy1HG02257hap2
mouseOverField name
type bigChain HG02257_hap2
longLabel HPRCy1 HG02257 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02257hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 284
linkDataUrl contrib/T2TPrimates/HG02257hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02257#hap2
visibility hide

track wfmashHPRCy1HG02486hap1
mouseOverField name
type bigChain HG02486_hap1
longLabel HPRCy1 HG02486 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02486hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 285
linkDataUrl contrib/T2TPrimates/HG02486hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02486#hap1
visibility hide

track wfmashHPRCy1HG02486hap2
mouseOverField name
type bigChain HG02486_hap2
longLabel HPRCy1 HG02486 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02486hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 286
linkDataUrl contrib/T2TPrimates/HG02486hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02486#hap2
visibility hide

track wfmashHPRCy1HG02559hap1
mouseOverField name
type bigChain HG02559_hap1
longLabel HPRCy1 HG02559 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02559hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 287
linkDataUrl contrib/T2TPrimates/HG02559hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02559#hap1
visibility hide

track wfmashHPRCy1HG02559hap2
mouseOverField name
type bigChain HG02559_hap2
longLabel HPRCy1 HG02559 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02559hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 288
linkDataUrl contrib/T2TPrimates/HG02559hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02559#hap2
visibility hide

track wfmashHPRCy1HG02572hap1
mouseOverField name
type bigChain HG02572_hap1
longLabel HPRCy1 HG02572 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02572hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 289
linkDataUrl contrib/T2TPrimates/HG02572hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02572#hap1
visibility hide

track wfmashHPRCy1HG02572hap2
mouseOverField name
type bigChain HG02572_hap2
longLabel HPRCy1 HG02572 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02572hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 290
linkDataUrl contrib/T2TPrimates/HG02572hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02572#hap2
visibility hide

track wfmashHPRCy1HG02622hap1
mouseOverField name
type bigChain HG02622_hap1
longLabel HPRCy1 HG02622 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02622hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 291
linkDataUrl contrib/T2TPrimates/HG02622hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02622#hap1
visibility hide

track wfmashHPRCy1HG02622hap2
mouseOverField name
type bigChain HG02622_hap2
longLabel HPRCy1 HG02622 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02622hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 292
linkDataUrl contrib/T2TPrimates/HG02622hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02622#hap2
visibility hide

track wfmashHPRCy1HG02630hap1
mouseOverField name
type bigChain HG02630_hap1
longLabel HPRCy1 HG02630 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02630hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 293
linkDataUrl contrib/T2TPrimates/HG02630hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02630#hap1
visibility hide

track wfmashHPRCy1HG02630hap2
mouseOverField name
type bigChain HG02630_hap2
longLabel HPRCy1 HG02630 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02630hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 294
linkDataUrl contrib/T2TPrimates/HG02630hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02630#hap2
visibility hide

track wfmashHPRCy1HG02717hap1
mouseOverField name
type bigChain HG02717_hap1
longLabel HPRCy1 HG02717 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02717hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 295
linkDataUrl contrib/T2TPrimates/HG02717hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02717#hap1
visibility hide

track wfmashHPRCy1HG02717hap2
mouseOverField name
type bigChain HG02717_hap2
longLabel HPRCy1 HG02717 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02717hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 296
linkDataUrl contrib/T2TPrimates/HG02717hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02717#hap2
visibility hide

track wfmashHPRCy1HG02723hap1
mouseOverField name
type bigChain HG02723_hap1
longLabel HPRCy1 HG02723 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02723hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 297
linkDataUrl contrib/T2TPrimates/HG02723hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02723#hap1
visibility hide

track wfmashHPRCy1HG02723hap2
mouseOverField name
type bigChain HG02723_hap2
longLabel HPRCy1 HG02723 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02723hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 298
linkDataUrl contrib/T2TPrimates/HG02723hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02723#hap2
visibility hide

track wfmashHPRCy1HG02818hap1
mouseOverField name
type bigChain HG02818_hap1
longLabel HPRCy1 HG02818 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02818hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 299
linkDataUrl contrib/T2TPrimates/HG02818hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02818#hap1
visibility hide

track wfmashHPRCy1HG02818hap2
mouseOverField name
type bigChain HG02818_hap2
longLabel HPRCy1 HG02818 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02818hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 300
linkDataUrl contrib/T2TPrimates/HG02818hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02818#hap2
visibility hide

track wfmashHPRCy1HG02886hap1
mouseOverField name
type bigChain HG02886_hap1
longLabel HPRCy1 HG02886 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02886hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 301
linkDataUrl contrib/T2TPrimates/HG02886hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02886#hap1
visibility hide

track wfmashHPRCy1HG02886hap2
mouseOverField name
type bigChain HG02886_hap2
longLabel HPRCy1 HG02886 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG02886hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 302
linkDataUrl contrib/T2TPrimates/HG02886hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG02886#hap2
visibility hide

track wfmashHPRCy1HG03098hap1
mouseOverField name
type bigChain HG03098_hap1
longLabel HPRCy1 HG03098 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03098hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 303
linkDataUrl contrib/T2TPrimates/HG03098hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03098#hap1
visibility hide

track wfmashHPRCy1HG03098hap2
mouseOverField name
type bigChain HG03098_hap2
longLabel HPRCy1 HG03098 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03098hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 304
linkDataUrl contrib/T2TPrimates/HG03098hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03098#hap2
visibility hide

track wfmashHPRCy1HG03453hap1
mouseOverField name
type bigChain HG03453_hap1
longLabel HPRCy1 HG03453 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03453hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 305
linkDataUrl contrib/T2TPrimates/HG03453hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03453#hap1
visibility hide

track wfmashHPRCy1HG03453hap2
mouseOverField name
type bigChain HG03453_hap2
longLabel HPRCy1 HG03453 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03453hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 306
linkDataUrl contrib/T2TPrimates/HG03453hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03453#hap2
visibility hide

track wfmashHPRCy1HG03486hap1
mouseOverField name
type bigChain HG03486_hap1
longLabel HPRCy1 HG03486 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03486hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 307
linkDataUrl contrib/T2TPrimates/HG03486hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03486#hap1
visibility hide

track wfmashHPRCy1HG03486hap2
mouseOverField name
type bigChain HG03486_hap2
longLabel HPRCy1 HG03486 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03486hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 308
linkDataUrl contrib/T2TPrimates/HG03486hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03486#hap2
visibility hide

track wfmashHPRCy1HG03492hap1
mouseOverField name
type bigChain HG03492_hap1
longLabel HPRCy1 HG03492 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03492hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 309
linkDataUrl contrib/T2TPrimates/HG03492hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03492#hap1
visibility hide

track wfmashHPRCy1HG03492hap2
mouseOverField name
type bigChain HG03492_hap2
longLabel HPRCy1 HG03492 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03492hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 310
linkDataUrl contrib/T2TPrimates/HG03492hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03492#hap2
visibility hide

track wfmashHPRCy1HG03516hap1
mouseOverField name
type bigChain HG03516_hap1
longLabel HPRCy1 HG03516 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03516hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 311
linkDataUrl contrib/T2TPrimates/HG03516hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03516#hap1
visibility hide

track wfmashHPRCy1HG03516hap2
mouseOverField name
type bigChain HG03516_hap2
longLabel HPRCy1 HG03516 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03516hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 312
linkDataUrl contrib/T2TPrimates/HG03516hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03516#hap2
visibility hide

track wfmashHPRCy1HG03540hap1
mouseOverField name
type bigChain HG03540_hap1
longLabel HPRCy1 HG03540 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03540hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 313
linkDataUrl contrib/T2TPrimates/HG03540hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03540#hap1
visibility hide

track wfmashHPRCy1HG03540hap2
mouseOverField name
type bigChain HG03540_hap2
longLabel HPRCy1 HG03540 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03540hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 314
linkDataUrl contrib/T2TPrimates/HG03540hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03540#hap2
visibility hide

track wfmashHPRCy1HG03579hap1
mouseOverField name
type bigChain HG03579_hap1
longLabel HPRCy1 HG03579 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03579hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 315
linkDataUrl contrib/T2TPrimates/HG03579hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03579#hap1
visibility hide

track wfmashHPRCy1HG03579hap2
mouseOverField name
type bigChain HG03579_hap2
longLabel HPRCy1 HG03579 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/HG03579hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 316
linkDataUrl contrib/T2TPrimates/HG03579hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel HG03579#hap2
visibility hide

track wfmashHPRCy1NA18906hap1
mouseOverField name
type bigChain NA18906_hap1
longLabel HPRCy1 NA18906 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/NA18906hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 317
linkDataUrl contrib/T2TPrimates/NA18906hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel NA18906#hap1
visibility hide

track wfmashHPRCy1NA18906hap2
mouseOverField name
type bigChain NA18906_hap2
longLabel HPRCy1 NA18906 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/NA18906hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 318
linkDataUrl contrib/T2TPrimates/NA18906hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel NA18906#hap2
visibility hide

track wfmashHPRCy1NA19240hap1
mouseOverField name
type bigChain NA19240_hap1
longLabel HPRCy1 NA19240 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/NA19240hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 319
linkDataUrl contrib/T2TPrimates/NA19240hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel NA19240#hap1
visibility hide

track wfmashHPRCy1NA19240hap2
mouseOverField name
type bigChain NA19240_hap2
longLabel HPRCy1 NA19240 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/NA19240hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 320
linkDataUrl contrib/T2TPrimates/NA19240hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel NA19240#hap2
visibility hide

track wfmashHPRCy1NA20129hap1
mouseOverField name
type bigChain NA20129_hap1
longLabel HPRCy1 NA20129 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/NA20129hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 321
linkDataUrl contrib/T2TPrimates/NA20129hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel NA20129#hap1
visibility hide

track wfmashHPRCy1NA20129hap2
mouseOverField name
type bigChain NA20129_hap2
longLabel HPRCy1 NA20129 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/NA20129hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 322
linkDataUrl contrib/T2TPrimates/NA20129hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel NA20129#hap2
visibility hide

track wfmashHPRCy1NA21309hap1
mouseOverField name
type bigChain NA21309_hap1
longLabel HPRCy1 NA21309 hap1 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/NA21309hap1_to_mPonPyg2_v2.0.bigChain.bb
priority 323
linkDataUrl contrib/T2TPrimates/NA21309hap1_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel NA21309#hap1
visibility hide

track wfmashHPRCy1NA21309hap2
mouseOverField name
type bigChain NA21309_hap2
longLabel HPRCy1 NA21309 hap2 to mPonPyg2_v2.0
parent wfmashHPRCy1
bigDataUrl contrib/T2TPrimates/NA21309hap2_to_mPonPyg2_v2.0.bigChain.bb
priority 324
linkDataUrl contrib/T2TPrimates/NA21309hap2_to_mPonPyg2_v2.0.bigChain.link.bb
group compGeno
shortLabel NA21309#hap2
visibility hide

track methylation
type bigWig
longLabel Methylation Frequency
autoScale off
superTrack on show
priority 61
graphTypeDefault bar
html contrib/T2TPrimates/epigenetics.html
gridDefault on
group regulation
maxHeightPixels 100:32:16
shortLabel Methylation

track ont5mC_CpG_G638
type bigWig 0 1
longLabel ONT 5mC CpG Processed Methylation (Guppy 6.3.8)
viewLimits 0:1
parent methylation
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.ONT_Guppy6.3.8_5mC.winnowmap_modkit_5mC_CpG_v1.0.bw
priority 61.1
html contrib/T2TPrimates/epigenetics.html
group regulation
shortLabel ONT 5mC CpG (Guppy 6.3.8)
visibility full

track ont5mC
type bigWig 0 100
longLabel ONT 5mC and 5hmC Methylation (Guppy 6.3.8)
viewLimits 0:100
parent methylation
bigDataUrl contrib/T2TPrimates/winnowmap.dip.ONT.modkit_5mC.bw
priority 61.2
html contrib/T2TPrimates/epigenetics.html
group regulation
shortLabel ONT 5mC & 5hmC (Guppy 6.3.8)
visibility hide

track ont5mC_CpG
type bigWig 0 1
longLabel ONT 5mC CpG Processed Methylation (Guppy 6.3.7)
viewLimits 0:1
parent methylation
bigDataUrl contrib/T2TPrimates/minimap.dip.ONT.modbam2bed_5mC_CpG.bw
priority 61.3
html contrib/T2TPrimates/epigenetics.html
group regulation
shortLabel ONT 5mC CpG (Guppy 6.3.7)
visibility hide

track repliSeq
type bigWig
longLabel Replication Sequencing
autoScale on
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0_RepliSeq_v1.0.bw
priority 62
graphTypeDefault bar
html contrib/T2TPrimates/repliseq.html
gridDefault on
group regulation
maxHeightPixels 100:32:16
visibility hide
shortLabel Repli-Seq

track censat
mouseOverField name
type bigBed 9
longLabel Centromeric Satellite Annotation
superTrack on show
priority 20
html contrib/T2TPrimates/censat.html
group varRep
visibility hide
shortLabel CenSat

track censatAnn
type bigBed 9
longLabel Centromeric Satellite Annotation
parent censat
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0_CenSat_v2.0.bb
itemRgb on
priority 20.1
html contrib/T2TPrimates/censat.html
group varRep
shortLabel CenSat
visibility dense

track censatStrand
type bigBed 9
longLabel Centromeric Satellite Strand Annotation
parent censat
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0_CenSatStrand_v2.0.bb
itemRgb on
priority 20.2
html contrib/T2TPrimates/censat.html
group varRep
shortLabel CenSat Strand
visibility hide

track centro
mouseOverField name
longLabel Centromere Annotation
superTrack on show
priority 21
group varRep
visibility hide
shortLabel Centromere

track cenpa
type bigWig
longLabel CENP-A
parent centro
bigDataUrl contrib/T2TPrimates/mPonPyg2.CENPA.bw
priority 21.1
html contrib/T2TPrimates/cenp-a.html
group varRep
maxHeightPixels 100:32:8
shortLabel CENP-A
visibility hide

track supFam
type bigBed 9
longLabel Alpha-Satellite Super Family
parent centro
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.SF_v1.0.bb
itemRgb on
priority 21.2
html contrib/T2TPrimates/aSatSF.html
group varRep
shortLabel AS SuperFamily
visibility hide

track sfStrand
type bigBed 9
longLabel Alpha-Satellite Strand
parent centro
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.Strand_v1.0.bb
itemRgb on
priority 21.3
html contrib/T2TPrimates/aSatStrand.html
group varRep
shortLabel AS Strand
visibility hide

track cenpbSite
type bigBed 4
longLabel CENP-B Binding Sites (k-mer match)
parent centro
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.cenpb_sites_v1.0.bb
itemRgb on
priority 21.4
html contrib/T2TPrimates/cenp-b_sites.html
group varRep
shortLabel CENP-B Sites
visibility hide
maxItems 100000

track segDups
type bigBed 9 35
longLabel SEDEF Segmental Duplications
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.SD_v1.0.bb
itemRgb on
priority 23
html contrib/T2TPrimates/segDups.html
group varRep
shortLabel SEDEF SegDups
visibility hide
maxItems 100000

track seqidyAcro
mouseOverField name
type bigBed 9
longLabel Sequence Identity in 10kb, Acrocentric Chromosomes
superTrack on show
itemRgb on
priority 24
html contrib/T2TPrimates/seqIdy.html
group varRep
visibility hide
shortLabel SeqIdy (Acro)

track seqIdychr12_hap2_hsa2a
type bigBed 9
longLabel mPonPyg2#chr12_hap2_hsa2a
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr12_hap2_hsa2a.bb
priority 24.22
group varRep
shortLabel chr12_hap2_hsa2a
visibility hide

track seqIdychr11_hap2_hsa2b
type bigBed 9
longLabel mPonPyg2#chr11_hap2_hsa2b
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr11_hap2_hsa2b.bb
priority 24.24
group varRep
shortLabel chr11_hap2_hsa2b
visibility hide

track seqIdychr13_hap2_hsa9
type bigBed 9
longLabel mPonPyg2#chr13_hap2_hsa9
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr13_hap2_hsa9.bb
priority 24.26
group varRep
shortLabel chr13_hap2_hsa9
visibility hide

track seqIdychr14_hap2_hsa13
type bigBed 9
longLabel mPonPyg2#chr14_hap2_hsa13
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr14_hap2_hsa13.bb
priority 24.28
group varRep
shortLabel chr14_hap2_hsa13
visibility hide

track seqIdychr15_hap2_hsa14
type bigBed 9
longLabel mPonPyg2#chr15_hap2_hsa14
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr15_hap2_hsa14.bb
priority 24.30
group varRep
shortLabel chr15_hap2_hsa14
visibility hide

track seqIdychr16_hap2_hsa15
type bigBed 9
longLabel mPonPyg2#chr16_hap2_hsa15
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr16_hap2_hsa15.bb
priority 24.32
group varRep
shortLabel chr16_hap2_hsa15
visibility hide

track seqIdychr17_hap2_hsa18
type bigBed 9
longLabel mPonPyg2#chr17_hap2_hsa18
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr17_hap2_hsa18.bb
priority 24.34
group varRep
shortLabel chr17_hap2_hsa18
visibility hide

track seqIdychr22_hap2_hsa21
type bigBed 9
longLabel mPonPyg2#chr22_hap2_hsa21
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr22_hap2_hsa21.bb
priority 24.44
group varRep
shortLabel chr22_hap2_hsa21
visibility hide

track seqIdychr23_hap2_hsa22
type bigBed 9
longLabel mPonPyg2#chr23_hap2_hsa22
parent seqidyAcro
bigDataUrl contrib/T2TPrimates/chr23_hap2_hsa22.bb
priority 24.46
group varRep
shortLabel chr23_hap2_hsa22
visibility hide

track seqidy
mouseOverField name
type bigBed 9
longLabel Sequence Identity in 10kb, Acrocentric Chromosomes
superTrack on hide
itemRgb on
priority 25
html contrib/T2TPrimates/seqIdy.html
group varRep
visibility hide
shortLabel SeqIdy (Non-Acro)

track seqIdychr1_hap2_hsa1
type bigBed 9
longLabel mPonPyg2#chr1_hap2_hsa1
parent seqidy
bigDataUrl contrib/T2TPrimates/chr1_hap2_hsa1.bb
priority 25.2
group varRep
shortLabel chr1_hap2_hsa1
visibility hide

track seqIdychr2_hap2_hsa3
type bigBed 9
longLabel mPonPyg2#chr2_hap2_hsa3
parent seqidy
bigDataUrl contrib/T2TPrimates/chr2_hap2_hsa3.bb
priority 25.4
group varRep
shortLabel chr2_hap2_hsa3
visibility hide

track seqIdychr3_hap2_hsa4
type bigBed 9
longLabel mPonPyg2#chr3_hap2_hsa4
parent seqidy
bigDataUrl contrib/T2TPrimates/chr3_hap2_hsa4.bb
priority 25.6
group varRep
shortLabel chr3_hap2_hsa4
visibility hide

track seqIdychr4_hap2_hsa5
type bigBed 9
longLabel mPonPyg2#chr4_hap2_hsa5
parent seqidy
bigDataUrl contrib/T2TPrimates/chr4_hap2_hsa5.bb
priority 25.8
group varRep
shortLabel chr4_hap2_hsa5
visibility hide

track seqIdychr5_hap2_hsa6
type bigBed 9
longLabel mPonPyg2#chr5_hap2_hsa6
parent seqidy
bigDataUrl contrib/T2TPrimates/chr5_hap2_hsa6.bb
priority 25.10
group varRep
shortLabel chr5_hap2_hsa6
visibility hide

track seqIdychr6_hap2_hsa7
type bigBed 9
longLabel mPonPyg2#chr6_hap2_hsa7
parent seqidy
bigDataUrl contrib/T2TPrimates/chr6_hap2_hsa7.bb
priority 25.12
group varRep
shortLabel chr6_hap2_hsa7
visibility hide

track seqIdychr7_hap2_hsa8
type bigBed 9
longLabel mPonPyg2#chr7_hap2_hsa8
parent seqidy
bigDataUrl contrib/T2TPrimates/chr7_hap2_hsa8.bb
priority 25.14
group varRep
shortLabel chr7_hap2_hsa8
visibility hide

track seqIdychr8_hap2_hsa10
type bigBed 9
longLabel mPonPyg2#chr8_hap2_hsa10
parent seqidy
bigDataUrl contrib/T2TPrimates/chr8_hap2_hsa10.bb
priority 25.16
group varRep
shortLabel chr8_hap2_hsa10
visibility hide

track seqIdychr9_hap2_hsa11
type bigBed 9
longLabel mPonPyg2#chr9_hap2_hsa11
parent seqidy
bigDataUrl contrib/T2TPrimates/chr9_hap2_hsa11.bb
priority 25.18
group varRep
shortLabel chr9_hap2_hsa11
visibility hide

track seqIdychr10_hap2_hsa12
type bigBed 9
longLabel mPonPyg2#chr10_hap2_hsa12
parent seqidy
bigDataUrl contrib/T2TPrimates/chr10_hap2_hsa12.bb
priority 25.20
group varRep
shortLabel chr10_hap2_hsa12
visibility hide

track seqIdychr18_hap2_hsa16
type bigBed 9
longLabel mPonPyg2#chr18_hap2_hsa16
parent seqidy
bigDataUrl contrib/T2TPrimates/chr18_hap2_hsa16.bb
priority 25.36
group varRep
shortLabel chr18_hap2_hsa16
visibility hide

track seqIdychr19_hap2_hsa17
type bigBed 9
longLabel mPonPyg2#chr19_hap2_hsa17
parent seqidy
bigDataUrl contrib/T2TPrimates/chr19_hap2_hsa17.bb
priority 25.38
group varRep
shortLabel chr19_hap2_hsa17
visibility hide

track seqIdychr20_hap2_hsa19
type bigBed 9
longLabel mPonPyg2#chr20_hap2_hsa19
parent seqidy
bigDataUrl contrib/T2TPrimates/chr20_hap2_hsa19.bb
priority 25.40
group varRep
shortLabel chr20_hap2_hsa19
visibility hide

track seqIdychr21_hap2_hsa20
type bigBed 9
longLabel mPonPyg2#chr21_hap2_hsa20
parent seqidy
bigDataUrl contrib/T2TPrimates/chr21_hap2_hsa20.bb
priority 25.42
group varRep
shortLabel chr21_hap2_hsa20
visibility hide

track seqidyCHM13
mouseOverField name
type bigBed 9
longLabel T2T-CHM13
bigDataUrl contrib/T2TPrimates/CHM13v2.0_to_mPonPyg2v2.0.bb
itemRgb on
priority 25.6
html contrib/T2TPrimates/seqIdy.html
group varRep
shortLabel SeqIdy (T2T-CHM13)
visibility hide

track nonB
longLabel Non-B DNA
superTrack on hide
priority 26
html contrib/T2TPrimates/nonB.html
group varRep
visibility hide
shortLabel Non-B DNA

track nonBapr
type bigBed 3
longLabel A-phased repeats
parent nonB
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.nonB_APR.bb
priority 26.1
group varRep
shortLabel A-phased repeats

track nonBdr
type bigBed 3
longLabel Direct repeats
parent nonB
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.nonB_DR.bb
priority 26.2
group varRep
shortLabel Direct repeats

track nonBgq
type bigBed 4
longLabel G-quadruplexes
parent nonB
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.nonB_GQ.bb
priority 26.3
group varRep
shortLabel G-quadruplexes

track nonBir
type bigBed 3
longLabel Inverted repeats
parent nonB
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.nonB_IR.bb
priority 26.4
group varRep
shortLabel Inverted repeats

track nonBmr
type bigBed 3
longLabel Mirror repeats
parent nonB
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.nonB_MR.bb
priority 26.5
group varRep
shortLabel Mirror repeats

track nonBtr
type bigBed 3
longLabel Triplex repeats
parent nonB
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.nonB_TRI.bb
priority 26.6
group varRep
shortLabel Triplex repeats

track nonBstr
type bigBed 3
longLabel Short tandem repeats
parent nonB
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.nonB_STR.bb
priority 26.7
group varRep
shortLabel Short tandem repeats

track nonBz
type bigBed 3
longLabel Z-DNA
parent nonB
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.nonB_Z.bb
priority 26.8
group varRep
shortLabel Z-DNA

track numt
type bigBed 3
longLabel Nuclear-Mitochondrial DNA Segment
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.numts_v1.0.bb
priority 27
html contrib/T2TPrimates/numt.html
group varRep
shortLabel NUMT
visibility hide

track feature
mouseOverField name
type bigBed 9
longLabel Genome Feature
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.GenomeFeature_v0.9.bb
itemRgb on
priority 11
html contrib/T2TPrimates/genomeFeature.html
group map
shortLabel Genome Feature
visibility dense

track microsatellites
type bigWig
longLabel Microsatellite Repeats
viewLimits 0:100
autoScale off
priority 13
graphTypeDefault points
compositeTrack on
html contrib/T2TPrimates/microsatellites.html
gridDefault on
group map
maxHeightPixels 100:32:16
visibility hide
shortLabel Microsatellites
alwaysZero on

track microsatellites_GA
type bigWig
longLabel GA Microsatellite Repeats
color 83,105,255
parent microsatellites
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.microsatellite.GA.128.bw
priority 13.1
group map
shortLabel GA

track microsatellites_TC
type bigWig
longLabel TC Microsatellite Repeats
color 102,0,102
parent microsatellites
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.microsatellite.TC.128.bw
priority 13.2
group map
shortLabel TC

track microsatellites_GC
type bigWig
longLabel GC Microsatellite Repeats
color 188,115,19
parent microsatellites
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.microsatellite.GC.128.bw
priority 13.3
group map
shortLabel GC

track microsatellites_AT
type bigWig
longLabel AT Microsatellite Repeats
color 51,102,0
parent microsatellites
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.microsatellite.AT.128.bw
priority 13.4
group map
shortLabel AT

track validation
longLabel Validation
superTrack on show
priority 18
html contrib/T2TPrimates/readCoverage.html
group map
shortLabel Validation
visibility hide

track readCoverageHiFi
type bigWig 0 130
longLabel HiFi primary alignment, mapped to both haplotypes
viewLimits 0:130
color 255,182,193
parent validation
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.dip.HiFi.pri.cov.bw
priority 18.1
html contrib/T2TPrimates/readCoverage.html
html contrib/T2TPrimates/readCoverage.html
group map
maxHeightPixels 100:32:8
shortLabel HiFi Coverage
visibility hide

track issuesHiFi
type bigBed 9
longLabel Assembly Issues by HiFi
parent validation
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.dip.HiFi.pri.issues.bb
itemRgb on
priority 18.2
html contrib/T2TPrimates/description.html
group map
shortLabel HiFi Issues
visibility hide
maxItems 100000

track readCoverageONT
type bigWig 0 180
longLabel ONT primary alignment, mapped to both haplotypes
viewLimits 0:180
color 173,216,230
parent validation
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.dip.ONT.pri.cov.bw
priority 18.3
html contrib/T2TPrimates/readCoverage.html
html contrib/T2TPrimates/readCoverage.html
group map
maxHeightPixels 100:32:8
shortLabel ONT Coverage
visibility hide

track issuesONT
type bigBed 9
longLabel Assembly Issues by ONT
parent validation
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.dip.ONT.pri.issues.bb
itemRgb on
priority 18.4
html contrib/T2TPrimates/description.html
group map
shortLabel ONT Issues
visibility hide
maxItems 100000

track issues
type bigBed 9
longLabel Assembly Issues by both HiFi and ONT
parent validation
bigDataUrl contrib/T2TPrimates/mPonPyg2_v2.0.issues_v1.0.bb
itemRgb on
priority 18.5
html contrib/T2TPrimates/description.html
group map
shortLabel HiFI & ONT Issues
visibility dense
maxItems 100000