# Assembly name: NHGRI_mPonPyg2-v2.0_pri # Organism name: Pongo pygmaeus (Bornean orangutan) # Isolate: AG05252 # Sex: male # Taxid: 9600 # BioSample: SAMN10521809 # BioProject: PRJNA916742 # Submitter: National Human Genome Research Institute, National Institutes of Health # Date: 2024-01-08 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Complete Genome # Genome representation: full # WGS project: JAQQLS02 # Assembly method: Verrko v. 1.4 # Expected final version: no # Genome coverage: 54.0x # Sequencing technology: PacBio Sequel; Oxford Nanopore PromethION # RefSeq category: Representative Genome # GenBank assembly accession: GCA_028885625.2 # RefSeq assembly accession: GCF_028885625.2 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_028885525.2 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_028885635.2 GCF_028885635.2 Primary Assembly ## GCF_036433335.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1_hap1_hsa1 assembled-molecule 1 Chromosome CM054630.2 = NC_072373.2 Primary Assembly 230807400 na chr2_hap1_hsa3 assembled-molecule 2 Chromosome CM068907.1 = NC_085930.1 Primary Assembly 209442601 na chr3_hap1_hsa4 assembled-molecule 3 Chromosome CM054633.2 = NC_072376.2 Primary Assembly 203829688 na chr4_hap1_hsa5 assembled-molecule 4 Chromosome CM054634.2 = NC_072377.2 Primary Assembly 186348328 na chr5_hap1_hsa6 assembled-molecule 5 Chromosome CM054635.2 = NC_072378.2 Primary Assembly 171334878 na chr6_hap1_hsa7 assembled-molecule 6 Chromosome CM054636.2 = NC_072379.2 Primary Assembly 158534780 na chr7_hap1_hsa8 assembled-molecule 7 Chromosome CM054637.2 = NC_072380.2 Primary Assembly 158152001 na chr8_hap1_hsa10 assembled-molecule 8 Chromosome CM054638.2 = NC_072381.2 Primary Assembly 139209255 na chr9_hap1_hsa11 assembled-molecule 9 Chromosome CM054639.2 = NC_072382.2 Primary Assembly 137033130 na chr10_hap1_hsa12 assembled-molecule 10 Chromosome CM054640.2 = NC_072383.2 Primary Assembly 132184685 na chr11_hap1_hsa2b assembled-molecule 11 Chromosome CM054641.2 = NC_072384.2 Primary Assembly 143261986 na chr12_hap1_hsa2a assembled-molecule 12 Chromosome CM054642.2 = NC_072385.2 Primary Assembly 134313182 na chr13_hap1_hsa9 assembled-molecule 13 Chromosome CM054643.2 = NC_072386.2 Primary Assembly 128999004 na chr14_hap1_hsa13 assembled-molecule 14 Chromosome CM054644.2 = NC_072387.2 Primary Assembly 124308952 na chr15_hap1_hsa14 assembled-molecule 15 Chromosome CM054645.2 = NC_072388.2 Primary Assembly 106409199 na chr16_hap1_hsa15 assembled-molecule 16 Chromosome CM054646.2 = NC_072389.2 Primary Assembly 107891546 na chr17_hap1_hsa18 assembled-molecule 17 Chromosome CM054647.2 = NC_072390.2 Primary Assembly 95557242 na chr18_hap1_hsa16 assembled-molecule 18 Chromosome CM054648.2 = NC_072391.2 Primary Assembly 87425153 na chr19_hap1_hsa17 assembled-molecule 19 Chromosome CM054649.2 = NC_072392.2 Primary Assembly 101496854 na chr20_hap1_hsa19 assembled-molecule 20 Chromosome CM054650.2 = NC_072393.2 Primary Assembly 65241172 na chr21_hap1_hsa20 assembled-molecule 21 Chromosome CM054651.2 = NC_072394.2 Primary Assembly 67026804 na chr22_hap1_hsa21 assembled-molecule 22 Chromosome CM054652.2 = NC_072395.2 Primary Assembly 59678711 na chr23_hap1_hsa22 assembled-molecule 23 Chromosome CM068908.1 = NC_085931.1 Primary Assembly 62059721 na chrX_hap1_hsaX assembled-molecule X Chromosome CM054653.2 = NC_072396.2 Primary Assembly 160969493 na chrY_hap2_hsaY assembled-molecule Y Chromosome CM054654.2 = NC_072397.2 Primary Assembly 49419398 na MT assembled-molecule MT Mitochondrion na <> NC_001646.1 non-nuclear 16389 na