# Assembly name: ASM2916879v1 # Organism name: Giardia duodenalis (diplomonads) # Isolate: P427 # Taxid: 5741 # BioSample: SAMN30804750 # BioProject: PRJNA879307 # Submitter: Robert Koch-Institut # Date: 2023-03-13 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAQPRZ01 # Assembly method: Miniasm v. MAY-2020; Racon v. MAY-2020 # Expected final version: yes # Genome coverage: 76x # Sequencing technology: PacBio RS # GenBank assembly accession: GCA_029168795.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_029168865.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name GD_P427_contig001.1 unplaced-scaffold na na JAQPRZ010000001.1 <> na Primary Assembly 1749163 na GD_P427_contig002.1 unplaced-scaffold na na JAQPRZ010000002.1 <> na Primary Assembly 963535 na GD_P427_contig003.1 unplaced-scaffold na na JAQPRZ010000003.1 <> na Primary Assembly 639968 na GD_P427_contig004.1 unplaced-scaffold na na JAQPRZ010000004.1 <> na Primary Assembly 556046 na GD_P427_contig005.1 unplaced-scaffold na na JAQPRZ010000005.1 <> na Primary Assembly 545205 na GD_P427_contig006.1 unplaced-scaffold na na JAQPRZ010000006.1 <> na Primary Assembly 464861 na GD_P427_contig007.1 unplaced-scaffold na na JAQPRZ010000007.1 <> na Primary Assembly 435043 na GD_P427_contig008.1 unplaced-scaffold na na JAQPRZ010000008.1 <> na Primary Assembly 397096 na GD_P427_contig009.1 unplaced-scaffold na na JAQPRZ010000009.1 <> na Primary Assembly 391045 na GD_P427_contig010.1 unplaced-scaffold na na JAQPRZ010000010.1 <> na Primary Assembly 328615 na GD_P427_contig011.1 unplaced-scaffold na na JAQPRZ010000011.1 <> na Primary Assembly 310084 na GD_P427_contig012.1 unplaced-scaffold na na JAQPRZ010000012.1 <> na Primary Assembly 280709 na GD_P427_contig013.1 unplaced-scaffold na na JAQPRZ010000013.1 <> na Primary Assembly 260718 na GD_P427_contig014.1 unplaced-scaffold na na JAQPRZ010000014.1 <> na Primary Assembly 260482 na GD_P427_contig015.1 unplaced-scaffold na na JAQPRZ010000015.1 <> na Primary Assembly 249929 na GD_P427_contig016.1 unplaced-scaffold na na JAQPRZ010000016.1 <> na Primary Assembly 237865 na GD_P427_contig017.1 unplaced-scaffold na na JAQPRZ010000017.1 <> na Primary Assembly 211812 na GD_P427_contig018.1 unplaced-scaffold na na JAQPRZ010000018.1 <> na Primary Assembly 206155 na GD_P427_contig019.1 unplaced-scaffold na na JAQPRZ010000019.1 <> na Primary Assembly 196568 na GD_P427_contig020.1 unplaced-scaffold na na JAQPRZ010000020.1 <> na Primary Assembly 183091 na GD_P427_contig021.1 unplaced-scaffold na na JAQPRZ010000021.1 <> na Primary Assembly 177886 na GD_P427_contig022.1 unplaced-scaffold na na JAQPRZ010000022.1 <> na Primary Assembly 175968 na GD_P427_contig023.1 unplaced-scaffold na na JAQPRZ010000023.1 <> na Primary Assembly 148652 na GD_P427_contig024.1 unplaced-scaffold na na JAQPRZ010000024.1 <> na Primary Assembly 128940 na GD_P427_contig025.1 unplaced-scaffold na na JAQPRZ010000025.1 <> na Primary Assembly 128739 na GD_P427_contig026.1 unplaced-scaffold na na JAQPRZ010000026.1 <> na Primary Assembly 108487 na GD_P427_contig027.1 unplaced-scaffold na na JAQPRZ010000027.1 <> na Primary Assembly 108374 na GD_P427_contig028.1 unplaced-scaffold na na JAQPRZ010000028.1 <> na Primary Assembly 106337 na GD_P427_contig029.1 unplaced-scaffold na na JAQPRZ010000029.1 <> na Primary Assembly 95533 na GD_P427_contig030.1 unplaced-scaffold na na JAQPRZ010000030.1 <> na Primary Assembly 91243 na GD_P427_contig031.1 unplaced-scaffold na na JAQPRZ010000031.1 <> na Primary Assembly 85645 na GD_P427_contig032.1 unplaced-scaffold na na JAQPRZ010000032.1 <> na Primary Assembly 77540 na GD_P427_contig033.1 unplaced-scaffold na na JAQPRZ010000033.1 <> na Primary Assembly 70782 na GD_P427_contig034.1 unplaced-scaffold na na JAQPRZ010000034.1 <> na Primary Assembly 69575 na GD_P427_contig035.1 unplaced-scaffold na na JAQPRZ010000035.1 <> na Primary Assembly 69399 na GD_P427_contig036.1 unplaced-scaffold na na JAQPRZ010000036.1 <> na Primary Assembly 69165 na GD_P427_contig037.1 unplaced-scaffold na na JAQPRZ010000037.1 <> na Primary Assembly 65875 na GD_P427_contig038.1 unplaced-scaffold na na JAQPRZ010000038.1 <> na Primary Assembly 63019 na GD_P427_contig039.1 unplaced-scaffold na na JAQPRZ010000039.1 <> na Primary Assembly 59292 na GD_P427_contig040.1 unplaced-scaffold na na JAQPRZ010000040.1 <> na Primary Assembly 55384 na GD_P427_contig041.1 unplaced-scaffold na na JAQPRZ010000041.1 <> na Primary Assembly 54358 na GD_P427_contig042.1 unplaced-scaffold na na JAQPRZ010000042.1 <> na Primary Assembly 53956 na GD_P427_contig043.1 unplaced-scaffold na na JAQPRZ010000043.1 <> na Primary Assembly 52363 na GD_P427_contig044.1 unplaced-scaffold na na JAQPRZ010000044.1 <> na Primary Assembly 51268 na GD_P427_contig045.1 unplaced-scaffold na na JAQPRZ010000045.1 <> na Primary Assembly 49551 na GD_P427_contig046.1 unplaced-scaffold na na JAQPRZ010000046.1 <> na Primary Assembly 49436 na GD_P427_contig047.1 unplaced-scaffold na na JAQPRZ010000047.1 <> na Primary Assembly 48859 na GD_P427_contig048.1 unplaced-scaffold na na JAQPRZ010000048.1 <> na Primary Assembly 47236 na GD_P427_contig049.1 unplaced-scaffold na na JAQPRZ010000049.1 <> na Primary Assembly 47144 na GD_P427_contig050.1 unplaced-scaffold na na JAQPRZ010000050.1 <> na Primary Assembly 46862 na GD_P427_contig051.1 unplaced-scaffold na na JAQPRZ010000051.1 <> na Primary Assembly 45068 na GD_P427_contig052.1 unplaced-scaffold na na JAQPRZ010000052.1 <> na Primary Assembly 44365 na GD_P427_contig053.1 unplaced-scaffold na na JAQPRZ010000053.1 <> na Primary Assembly 43835 na GD_P427_contig054.1 unplaced-scaffold na na JAQPRZ010000054.1 <> na Primary Assembly 43198 na GD_P427_contig055.1 unplaced-scaffold na na JAQPRZ010000055.1 <> na Primary Assembly 42836 na GD_P427_contig056.1 unplaced-scaffold na na JAQPRZ010000056.1 <> na Primary Assembly 38573 na GD_P427_contig057.1 unplaced-scaffold na na JAQPRZ010000057.1 <> na Primary Assembly 36901 na GD_P427_contig058.1 unplaced-scaffold na na JAQPRZ010000058.1 <> na Primary Assembly 36230 na GD_P427_contig059.1 unplaced-scaffold na na JAQPRZ010000059.1 <> na Primary Assembly 34009 na GD_P427_contig060.1 unplaced-scaffold na na JAQPRZ010000060.1 <> na Primary Assembly 33067 na GD_P427_contig061.1 unplaced-scaffold na na JAQPRZ010000061.1 <> na Primary Assembly 32810 na GD_P427_contig062.1 unplaced-scaffold na na JAQPRZ010000062.1 <> na Primary Assembly 31157 na GD_P427_contig063.1 unplaced-scaffold na na JAQPRZ010000063.1 <> na Primary Assembly 30774 na GD_P427_contig064.1 unplaced-scaffold na na JAQPRZ010000064.1 <> na Primary Assembly 30004 na GD_P427_contig065.1 unplaced-scaffold na na JAQPRZ010000065.1 <> na Primary Assembly 28345 na GD_P427_contig066.1 unplaced-scaffold na na JAQPRZ010000066.1 <> na Primary Assembly 27700 na GD_P427_contig067.1 unplaced-scaffold na na JAQPRZ010000067.1 <> na Primary Assembly 27008 na GD_P427_contig068.1 unplaced-scaffold na na JAQPRZ010000068.1 <> na Primary Assembly 26149 na GD_P427_contig069.1 unplaced-scaffold na na JAQPRZ010000069.1 <> na Primary Assembly 25434 na GD_P427_contig070.1 unplaced-scaffold na na JAQPRZ010000070.1 <> na Primary Assembly 24841 na GD_P427_contig071.1 unplaced-scaffold na na JAQPRZ010000071.1 <> na Primary Assembly 24476 na GD_P427_contig072.1 unplaced-scaffold na na JAQPRZ010000072.1 <> na Primary Assembly 24251 na GD_P427_contig073.1 unplaced-scaffold na na JAQPRZ010000073.1 <> na Primary Assembly 23919 na GD_P427_contig074.1 unplaced-scaffold na na JAQPRZ010000074.1 <> na Primary Assembly 23600 na GD_P427_contig075.1 unplaced-scaffold na na JAQPRZ010000075.1 <> na Primary Assembly 23217 na GD_P427_contig076.1 unplaced-scaffold na na JAQPRZ010000076.1 <> na Primary Assembly 23210 na GD_P427_contig077.1 unplaced-scaffold na na JAQPRZ010000077.1 <> na Primary Assembly 22431 na GD_P427_contig078.1 unplaced-scaffold na na JAQPRZ010000078.1 <> na Primary Assembly 21823 na GD_P427_contig079.1 unplaced-scaffold na na JAQPRZ010000079.1 <> na Primary Assembly 19410 na GD_P427_contig080.1 unplaced-scaffold na na JAQPRZ010000080.1 <> na Primary Assembly 19251 na GD_P427_contig081.1 unplaced-scaffold na na JAQPRZ010000081.1 <> na Primary Assembly 18949 na GD_P427_contig082.1 unplaced-scaffold na na JAQPRZ010000082.1 <> na Primary Assembly 18544 na GD_P427_contig083.1 unplaced-scaffold na na JAQPRZ010000083.1 <> na Primary Assembly 17886 na GD_P427_contig084.1 unplaced-scaffold na na JAQPRZ010000084.1 <> na Primary Assembly 17712 na GD_P427_contig085.1 unplaced-scaffold na na JAQPRZ010000085.1 <> na Primary Assembly 17172 na GD_P427_contig086.1 unplaced-scaffold na na JAQPRZ010000086.1 <> na Primary Assembly 16982 na GD_P427_contig087.1 unplaced-scaffold na na JAQPRZ010000087.1 <> na Primary Assembly 16980 na GD_P427_contig088.1 unplaced-scaffold na na JAQPRZ010000088.1 <> na Primary Assembly 16779 na GD_P427_contig089.1 unplaced-scaffold na na JAQPRZ010000089.1 <> na Primary Assembly 16692 na GD_P427_contig090.1 unplaced-scaffold na na JAQPRZ010000090.1 <> na Primary Assembly 16677 na GD_P427_contig091.1 unplaced-scaffold na na JAQPRZ010000091.1 <> na Primary Assembly 16323 na GD_P427_contig092.1 unplaced-scaffold na na JAQPRZ010000092.1 <> na Primary Assembly 15370 na GD_P427_contig093.1 unplaced-scaffold na na JAQPRZ010000093.1 <> na Primary Assembly 14860 na GD_P427_contig094.1 unplaced-scaffold na na JAQPRZ010000094.1 <> na Primary Assembly 14730 na GD_P427_contig095.1 unplaced-scaffold na na JAQPRZ010000095.1 <> na Primary Assembly 14036 na GD_P427_contig096.1 unplaced-scaffold na na JAQPRZ010000096.1 <> na Primary Assembly 13933 na GD_P427_contig097.1 unplaced-scaffold na na JAQPRZ010000097.1 <> na Primary Assembly 13310 na GD_P427_contig098.1 unplaced-scaffold na na JAQPRZ010000098.1 <> na Primary Assembly 12643 na GD_P427_contig099.1 unplaced-scaffold na na JAQPRZ010000099.1 <> na Primary Assembly 12565 na GD_P427_contig100.1 unplaced-scaffold na na JAQPRZ010000100.1 <> na Primary Assembly 11691 na GD_P427_contig101.1 unplaced-scaffold na na JAQPRZ010000101.1 <> na Primary Assembly 11504 na GD_P427_contig102.1 unplaced-scaffold na na JAQPRZ010000102.1 <> na Primary Assembly 11090 na GD_P427_contig103.1 unplaced-scaffold na na JAQPRZ010000103.1 <> na Primary Assembly 10991 na GD_P427_contig104.1 unplaced-scaffold na na JAQPRZ010000104.1 <> na Primary Assembly 10779 na GD_P427_contig105.1 unplaced-scaffold na na JAQPRZ010000105.1 <> na Primary Assembly 10534 na GD_P427_contig106.1 unplaced-scaffold na na JAQPRZ010000106.1 <> na Primary Assembly 10512 na GD_P427_contig107.1 unplaced-scaffold na na JAQPRZ010000107.1 <> na Primary Assembly 10500 na GD_P427_contig108.1 unplaced-scaffold na na JAQPRZ010000108.1 <> na Primary Assembly 10297 na GD_P427_contig109.1 unplaced-scaffold na na JAQPRZ010000109.1 <> na Primary Assembly 9969 na GD_P427_contig110.1 unplaced-scaffold na na JAQPRZ010000110.1 <> na Primary Assembly 9407 na GD_P427_contig111.1 unplaced-scaffold na na JAQPRZ010000111.1 <> na Primary Assembly 8953 na GD_P427_contig112.1 unplaced-scaffold na na JAQPRZ010000112.1 <> na Primary Assembly 8309 na GD_P427_contig113.1 unplaced-scaffold na na JAQPRZ010000113.1 <> na Primary Assembly 8305 na GD_P427_contig114.1 unplaced-scaffold na na JAQPRZ010000114.1 <> na Primary Assembly 7964 na GD_P427_contig115.1 unplaced-scaffold na na JAQPRZ010000115.1 <> na Primary Assembly 7477 na GD_P427_contig116.1 unplaced-scaffold na na JAQPRZ010000116.1 <> na Primary Assembly 6775 na GD_P427_contig117.1 unplaced-scaffold na na JAQPRZ010000117.1 <> na Primary Assembly 6413 na GD_P427_contig118.1 unplaced-scaffold na na JAQPRZ010000118.1 <> na Primary Assembly 5355 na GD_P427_contig119.1 unplaced-scaffold na na JAQPRZ010000119.1 <> na Primary Assembly 5195 na GD_P427_contig120.1 unplaced-scaffold na na JAQPRZ010000120.1 <> na Primary Assembly 5101 na GD_P427_contig121.1 unplaced-scaffold na na JAQPRZ010000121.1 <> na Primary Assembly 4367 na GD_P427_contig122.1 unplaced-scaffold na na JAQPRZ010000122.1 <> na Primary Assembly 3678 na GD_P427_contig123.1 unplaced-scaffold na na JAQPRZ010000123.1 <> na Primary Assembly 3441 na GD_P427_contig124.1 unplaced-scaffold na na JAQPRZ010000124.1 <> na Primary Assembly 3093 na GD_P427_contig125.1 unplaced-scaffold na na JAQPRZ010000125.1 <> na Primary Assembly 3048 na GD_P427_contig126.1 unplaced-scaffold na na JAQPRZ010000126.1 <> na Primary Assembly 2901 na GD_P427_contig127.1 unplaced-scaffold na na JAQPRZ010000127.1 <> na Primary Assembly 2233 na GD_P427_contig128.1 unplaced-scaffold na na JAQPRZ010000128.1 <> na Primary Assembly 1666 na GD_P427_contig129.1 unplaced-scaffold na na JAQPRZ010000129.1 <> na Primary Assembly 1534 na GD_P427_contig130.1 unplaced-scaffold na na JAQPRZ010000130.1 <> na Primary Assembly 1225 na GD_P427_contig131.1 unplaced-scaffold na na JAQPRZ010000131.1 <> na Primary Assembly 1190 na GD_P427_contig132.1 unplaced-scaffold na na JAQPRZ010000132.1 <> na Primary Assembly 744 na