# Assembly name: ASM2916885v1 # Organism name: Giardia duodenalis (diplomonads) # Isolate: P344 # Taxid: 5741 # BioSample: SAMN30804746 # BioProject: PRJNA879307 # Submitter: Robert Koch-Institut # Date: 2023-03-13 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAQPSD01 # Assembly method: Miniasm v. MAY-2020; Racon v. MAY-2020 # Expected final version: yes # Genome coverage: 92x # Sequencing technology: PacBio RS # GenBank assembly accession: GCA_029168855.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_029168925.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name GD_P344_contig001.1 unplaced-scaffold na na JAQPSD010000001.1 <> na Primary Assembly 4133617 na GD_P344_contig002.1 unplaced-scaffold na na JAQPSD010000002.1 <> na Primary Assembly 815466 na GD_P344_contig003.1 unplaced-scaffold na na JAQPSD010000003.1 <> na Primary Assembly 563868 na GD_P344_contig004.1 unplaced-scaffold na na JAQPSD010000004.1 <> na Primary Assembly 519970 na GD_P344_contig005.1 unplaced-scaffold na na JAQPSD010000005.1 <> na Primary Assembly 466289 na GD_P344_contig006.1 unplaced-scaffold na na JAQPSD010000006.1 <> na Primary Assembly 448428 na GD_P344_contig007.1 unplaced-scaffold na na JAQPSD010000007.1 <> na Primary Assembly 447873 na GD_P344_contig008.1 unplaced-scaffold na na JAQPSD010000008.1 <> na Primary Assembly 423748 na GD_P344_contig009.1 unplaced-scaffold na na JAQPSD010000009.1 <> na Primary Assembly 419450 na GD_P344_contig010.1 unplaced-scaffold na na JAQPSD010000010.1 <> na Primary Assembly 416063 na GD_P344_contig011.1 unplaced-scaffold na na JAQPSD010000011.1 <> na Primary Assembly 384048 na GD_P344_contig012.1 unplaced-scaffold na na JAQPSD010000012.1 <> na Primary Assembly 319632 na GD_P344_contig013.1 unplaced-scaffold na na JAQPSD010000013.1 <> na Primary Assembly 289236 na GD_P344_contig014.1 unplaced-scaffold na na JAQPSD010000014.1 <> na Primary Assembly 214939 na GD_P344_contig015.1 unplaced-scaffold na na JAQPSD010000015.1 <> na Primary Assembly 213093 na GD_P344_contig016.1 unplaced-scaffold na na JAQPSD010000016.1 <> na Primary Assembly 190293 na GD_P344_contig017.1 unplaced-scaffold na na JAQPSD010000017.1 <> na Primary Assembly 188426 na GD_P344_contig018.1 unplaced-scaffold na na JAQPSD010000018.1 <> na Primary Assembly 168262 na GD_P344_contig019.1 unplaced-scaffold na na JAQPSD010000019.1 <> na Primary Assembly 146546 na GD_P344_contig020.1 unplaced-scaffold na na JAQPSD010000020.1 <> na Primary Assembly 136821 na GD_P344_contig021.1 unplaced-scaffold na na JAQPSD010000021.1 <> na Primary Assembly 123000 na GD_P344_contig022.1 unplaced-scaffold na na JAQPSD010000022.1 <> na Primary Assembly 120076 na GD_P344_contig023.1 unplaced-scaffold na na JAQPSD010000023.1 <> na Primary Assembly 116170 na GD_P344_contig024.1 unplaced-scaffold na na JAQPSD010000024.1 <> na Primary Assembly 106270 na GD_P344_contig025.1 unplaced-scaffold na na JAQPSD010000025.1 <> na Primary Assembly 105484 na GD_P344_contig026.1 unplaced-scaffold na na JAQPSD010000026.1 <> na Primary Assembly 104121 na GD_P344_contig027.1 unplaced-scaffold na na JAQPSD010000027.1 <> na Primary Assembly 98845 na GD_P344_contig028.1 unplaced-scaffold na na JAQPSD010000028.1 <> na Primary Assembly 96831 na GD_P344_contig029.1 unplaced-scaffold na na JAQPSD010000029.1 <> na Primary Assembly 88032 na GD_P344_contig030.1 unplaced-scaffold na na JAQPSD010000030.1 <> na Primary Assembly 86497 na GD_P344_contig031.1 unplaced-scaffold na na JAQPSD010000031.1 <> na Primary Assembly 85686 na GD_P344_contig032.1 unplaced-scaffold na na JAQPSD010000032.1 <> na Primary Assembly 68246 na GD_P344_contig033.1 unplaced-scaffold na na JAQPSD010000033.1 <> na Primary Assembly 66183 na GD_P344_contig034.1 unplaced-scaffold na na JAQPSD010000034.1 <> na Primary Assembly 57224 na GD_P344_contig035.1 unplaced-scaffold na na JAQPSD010000035.1 <> na Primary Assembly 55992 na GD_P344_contig036.1 unplaced-scaffold na na JAQPSD010000036.1 <> na Primary Assembly 50779 na GD_P344_contig037.1 unplaced-scaffold na na JAQPSD010000037.1 <> na Primary Assembly 44046 na GD_P344_contig038.1 unplaced-scaffold na na JAQPSD010000038.1 <> na Primary Assembly 43394 na GD_P344_contig039.1 unplaced-scaffold na na JAQPSD010000039.1 <> na Primary Assembly 41252 na GD_P344_contig040.1 unplaced-scaffold na na JAQPSD010000040.1 <> na Primary Assembly 40031 na GD_P344_contig041.1 unplaced-scaffold na na JAQPSD010000041.1 <> na Primary Assembly 38811 na GD_P344_contig042.1 unplaced-scaffold na na JAQPSD010000042.1 <> na Primary Assembly 38767 na GD_P344_contig043.1 unplaced-scaffold na na JAQPSD010000043.1 <> na Primary Assembly 37223 na GD_P344_contig044.1 unplaced-scaffold na na JAQPSD010000044.1 <> na Primary Assembly 37024 na GD_P344_contig045.1 unplaced-scaffold na na JAQPSD010000045.1 <> na Primary Assembly 36249 na GD_P344_contig046.1 unplaced-scaffold na na JAQPSD010000046.1 <> na Primary Assembly 33852 na GD_P344_contig047.1 unplaced-scaffold na na JAQPSD010000047.1 <> na Primary Assembly 33628 na GD_P344_contig048.1 unplaced-scaffold na na JAQPSD010000048.1 <> na Primary Assembly 32656 na GD_P344_contig049.1 unplaced-scaffold na na JAQPSD010000049.1 <> na Primary Assembly 31647 na GD_P344_contig050.1 unplaced-scaffold na na JAQPSD010000050.1 <> na Primary Assembly 31553 na GD_P344_contig051.1 unplaced-scaffold na na JAQPSD010000051.1 <> na Primary Assembly 29715 na GD_P344_contig052.1 unplaced-scaffold na na JAQPSD010000052.1 <> na Primary Assembly 29068 na GD_P344_contig053.1 unplaced-scaffold na na JAQPSD010000053.1 <> na Primary Assembly 28226 na GD_P344_contig054.1 unplaced-scaffold na na JAQPSD010000054.1 <> na Primary Assembly 27878 na GD_P344_contig055.1 unplaced-scaffold na na JAQPSD010000055.1 <> na Primary Assembly 27013 na GD_P344_contig056.1 unplaced-scaffold na na JAQPSD010000056.1 <> na Primary Assembly 26363 na GD_P344_contig057.1 unplaced-scaffold na na JAQPSD010000057.1 <> na Primary Assembly 26109 na GD_P344_contig058.1 unplaced-scaffold na na JAQPSD010000058.1 <> na Primary Assembly 25720 na GD_P344_contig059.1 unplaced-scaffold na na JAQPSD010000059.1 <> na Primary Assembly 24532 na GD_P344_contig060.1 unplaced-scaffold na na JAQPSD010000060.1 <> na Primary Assembly 24498 na GD_P344_contig061.1 unplaced-scaffold na na JAQPSD010000061.1 <> na Primary Assembly 24233 na GD_P344_contig062.1 unplaced-scaffold na na JAQPSD010000062.1 <> na Primary Assembly 23196 na GD_P344_contig063.1 unplaced-scaffold na na JAQPSD010000063.1 <> na Primary Assembly 22989 na GD_P344_contig064.1 unplaced-scaffold na na JAQPSD010000064.1 <> na Primary Assembly 22627 na GD_P344_contig065.1 unplaced-scaffold na na JAQPSD010000065.1 <> na Primary Assembly 22557 na GD_P344_contig066.1 unplaced-scaffold na na JAQPSD010000066.1 <> na Primary Assembly 22402 na GD_P344_contig067.1 unplaced-scaffold na na JAQPSD010000067.1 <> na Primary Assembly 21455 na GD_P344_contig068.1 unplaced-scaffold na na JAQPSD010000068.1 <> na Primary Assembly 20653 na GD_P344_contig069.1 unplaced-scaffold na na JAQPSD010000069.1 <> na Primary Assembly 19951 na GD_P344_contig070.1 unplaced-scaffold na na JAQPSD010000070.1 <> na Primary Assembly 17875 na GD_P344_contig071.1 unplaced-scaffold na na JAQPSD010000071.1 <> na Primary Assembly 17787 na GD_P344_contig072.1 unplaced-scaffold na na JAQPSD010000072.1 <> na Primary Assembly 17283 na GD_P344_contig073.1 unplaced-scaffold na na JAQPSD010000073.1 <> na Primary Assembly 16901 na GD_P344_contig074.1 unplaced-scaffold na na JAQPSD010000074.1 <> na Primary Assembly 16702 na GD_P344_contig075.1 unplaced-scaffold na na JAQPSD010000075.1 <> na Primary Assembly 16510 na GD_P344_contig076.1 unplaced-scaffold na na JAQPSD010000076.1 <> na Primary Assembly 16279 na GD_P344_contig077.1 unplaced-scaffold na na JAQPSD010000077.1 <> na Primary Assembly 16234 na GD_P344_contig078.1 unplaced-scaffold na na JAQPSD010000078.1 <> na Primary Assembly 16088 na GD_P344_contig079.1 unplaced-scaffold na na JAQPSD010000079.1 <> na Primary Assembly 15658 na GD_P344_contig080.1 unplaced-scaffold na na JAQPSD010000080.1 <> na Primary Assembly 14800 na GD_P344_contig081.1 unplaced-scaffold na na JAQPSD010000081.1 <> na Primary Assembly 14771 na GD_P344_contig082.1 unplaced-scaffold na na JAQPSD010000082.1 <> na Primary Assembly 12718 na GD_P344_contig083.1 unplaced-scaffold na na JAQPSD010000083.1 <> na Primary Assembly 11905 na GD_P344_contig084.1 unplaced-scaffold na na JAQPSD010000084.1 <> na Primary Assembly 11579 na GD_P344_contig085.1 unplaced-scaffold na na JAQPSD010000085.1 <> na Primary Assembly 11283 na GD_P344_contig086.1 unplaced-scaffold na na JAQPSD010000086.1 <> na Primary Assembly 11164 na GD_P344_contig087.1 unplaced-scaffold na na JAQPSD010000087.1 <> na Primary Assembly 10994 na GD_P344_contig088.1 unplaced-scaffold na na JAQPSD010000088.1 <> na Primary Assembly 10960 na GD_P344_contig089.1 unplaced-scaffold na na JAQPSD010000089.1 <> na Primary Assembly 10947 na GD_P344_contig090.1 unplaced-scaffold na na JAQPSD010000090.1 <> na Primary Assembly 10803 na GD_P344_contig091.1 unplaced-scaffold na na JAQPSD010000091.1 <> na Primary Assembly 10753 na GD_P344_contig092.1 unplaced-scaffold na na JAQPSD010000092.1 <> na Primary Assembly 10203 na GD_P344_contig093.1 unplaced-scaffold na na JAQPSD010000093.1 <> na Primary Assembly 10095 na GD_P344_contig094.1 unplaced-scaffold na na JAQPSD010000094.1 <> na Primary Assembly 9793 na GD_P344_contig095.1 unplaced-scaffold na na JAQPSD010000095.1 <> na Primary Assembly 9661 na GD_P344_contig096.1 unplaced-scaffold na na JAQPSD010000096.1 <> na Primary Assembly 9381 na GD_P344_contig097.1 unplaced-scaffold na na JAQPSD010000097.1 <> na Primary Assembly 9316 na GD_P344_contig098.1 unplaced-scaffold na na JAQPSD010000098.1 <> na Primary Assembly 8125 na GD_P344_contig099.1 unplaced-scaffold na na JAQPSD010000099.1 <> na Primary Assembly 8034 na GD_P344_contig100.1 unplaced-scaffold na na JAQPSD010000100.1 <> na Primary Assembly 6466 na GD_P344_contig101.1 unplaced-scaffold na na JAQPSD010000101.1 <> na Primary Assembly 5698 na GD_P344_contig102.1 unplaced-scaffold na na JAQPSD010000102.1 <> na Primary Assembly 5344 na GD_P344_contig103.1 unplaced-scaffold na na JAQPSD010000103.1 <> na Primary Assembly 4899 na GD_P344_contig104.1 unplaced-scaffold na na JAQPSD010000104.1 <> na Primary Assembly 4720 na GD_P344_contig105.1 unplaced-scaffold na na JAQPSD010000105.1 <> na Primary Assembly 4711 na GD_P344_contig106.1 unplaced-scaffold na na JAQPSD010000106.1 <> na Primary Assembly 3716 na GD_P344_contig107.1 unplaced-scaffold na na JAQPSD010000107.1 <> na Primary Assembly 3487 na GD_P344_contig108.1 unplaced-scaffold na na JAQPSD010000108.1 <> na Primary Assembly 3287 na GD_P344_contig109.1 unplaced-scaffold na na JAQPSD010000109.1 <> na Primary Assembly 1892 na GD_P344_contig110.1 unplaced-scaffold na na JAQPSD010000110.1 <> na Primary Assembly 1579 na GD_P344_contig111.1 unplaced-scaffold na na JAQPSD010000111.1 <> na Primary Assembly 1290 na