# Assembly name: 20QLD87 # Organism name: Puccinia triticina (wheat leaf rust) # Isolate: 20QLD87 # Taxid: 208348 # BioSample: SAMN31776678 # BioProject: PRJNA902835 # Submitter: CSIRO # Date: 2023-04-13 # Assembly type: unresolved-diploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAPPVV01 # Assembly method: hifiasm v. 0.16.1 # Expected final version: yes # Genome coverage: 60.0x # Sequencing technology: PacBio Hifi + Hi-C # GenBank assembly accession: GCA_029634005.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_029634315.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1_C assembled-molecule 1C Chromosome CM056300.1 <> na Primary Assembly 9365963 na chr1_D assembled-molecule 1D Chromosome CM056301.1 <> na Primary Assembly 9299603 na chr2_C assembled-molecule 2C Chromosome CM056302.1 <> na Primary Assembly 8279169 na chr2_D assembled-molecule 2D Chromosome CM056303.1 <> na Primary Assembly 7877770 na chr3_C assembled-molecule 3C Chromosome CM056304.1 <> na Primary Assembly 9012612 na chr3_D assembled-molecule 3D Chromosome CM056305.1 <> na Primary Assembly 8859073 na chr4_C assembled-molecule 4C Chromosome CM056306.1 <> na Primary Assembly 8396214 na chr4_D assembled-molecule 4D Chromosome CM056307.1 <> na Primary Assembly 8313162 na chr5_C assembled-molecule 5C Chromosome CM056308.1 <> na Primary Assembly 7810846 na chr5_D assembled-molecule 5D Chromosome CM056309.1 <> na Primary Assembly 8020477 na chr6_C assembled-molecule 6C Chromosome CM056310.1 <> na Primary Assembly 8497072 na chr6_D assembled-molecule 6D Chromosome CM056311.1 <> na Primary Assembly 8069243 na chr7_C assembled-molecule 7C Chromosome CM056312.1 <> na Primary Assembly 7710878 na chr7_D assembled-molecule 7D Chromosome CM056313.1 <> na Primary Assembly 7587038 na chr8_C assembled-molecule 8C Chromosome CM056314.1 <> na Primary Assembly 7461278 na chr8_D assembled-molecule 8D Chromosome CM056315.1 <> na Primary Assembly 7358361 na chr9_C assembled-molecule 9C Chromosome CM056316.1 <> na Primary Assembly 7516638 na chr9_D assembled-molecule 9D Chromosome CM056317.1 <> na Primary Assembly 6898720 na chr10_C assembled-molecule 10C Chromosome CM056318.1 <> na Primary Assembly 7216724 na chr10_D assembled-molecule 10D Chromosome CM056319.1 <> na Primary Assembly 7266659 na chr11_C assembled-molecule 11C Chromosome CM056320.1 <> na Primary Assembly 6814370 na chr11_D assembled-molecule 11D Chromosome CM056321.1 <> na Primary Assembly 7006814 na chr12_C assembled-molecule 12C Chromosome CM056322.1 <> na Primary Assembly 6055093 na chr12_D assembled-molecule 12D Chromosome CM056323.1 <> na Primary Assembly 5992471 na chr13_C assembled-molecule 13C Chromosome CM056324.1 <> na Primary Assembly 5706749 na chr13_D assembled-molecule 13D Chromosome CM056325.1 <> na Primary Assembly 5659505 na chr14_C assembled-molecule 14C Chromosome CM056326.1 <> na Primary Assembly 5288343 na chr14_D assembled-molecule 14D Chromosome CM056327.1 <> na Primary Assembly 5448361 na chr15_C assembled-molecule 15C Chromosome CM056328.1 <> na Primary Assembly 4480348 na chr15_D assembled-molecule 15D Chromosome CM056329.1 <> na Primary Assembly 4295225 na chr16_C assembled-molecule 16C Chromosome CM056330.1 <> na Primary Assembly 4910384 na chr16_D assembled-molecule 16D Chromosome CM056331.1 <> na Primary Assembly 4854991 na chr17_C assembled-molecule 17C Chromosome CM056332.1 <> na Primary Assembly 4412544 na chr17_D assembled-molecule 17D Chromosome CM056333.1 <> na Primary Assembly 4586424 na chr18_C assembled-molecule 18C Chromosome CM056334.1 <> na Primary Assembly 4316561 na chr18_D assembled-molecule 18D Chromosome CM056335.1 <> na Primary Assembly 4446136 na h1tg000032c unplaced-scaffold na na JAPPVV010000037.1 <> na Primary Assembly 103062 na h1tg000037l unplaced-scaffold na na JAPPVV010000038.1 <> na Primary Assembly 38955 na h1tg000043l unplaced-scaffold na na JAPPVV010000039.1 <> na Primary Assembly 123168 na h1tg000053c unplaced-scaffold na na JAPPVV010000040.1 <> na Primary Assembly 51531 na h1tg000057l unplaced-scaffold na na JAPPVV010000041.1 <> na Primary Assembly 59419 na h1tg000072l unplaced-scaffold na na JAPPVV010000042.1 <> na Primary Assembly 92425 na h1tg000073l unplaced-scaffold na na JAPPVV010000043.1 <> na Primary Assembly 30196 na h1tg000075l unplaced-scaffold na na JAPPVV010000044.1 <> na Primary Assembly 28744 na h1tg000080c unplaced-scaffold na na JAPPVV010000045.1 <> na Primary Assembly 109281 na h1tg000085c unplaced-scaffold na na JAPPVV010000046.1 <> na Primary Assembly 49460 na h1tg000088l unplaced-scaffold na na JAPPVV010000047.1 <> na Primary Assembly 24382 na h1tg000089l unplaced-scaffold na na JAPPVV010000048.1 <> na Primary Assembly 39812 na h1tg000092l unplaced-scaffold na na JAPPVV010000049.1 <> na Primary Assembly 66899 na h1tg000100l unplaced-scaffold na na JAPPVV010000050.1 <> na Primary Assembly 58819 na h1tg000115l unplaced-scaffold na na JAPPVV010000051.1 <> na Primary Assembly 26908 na h1tg000127l unplaced-scaffold na na JAPPVV010000052.1 <> na Primary Assembly 33359 na h1tg000134l unplaced-scaffold na na JAPPVV010000053.1 <> na Primary Assembly 28251 na h1tg000135l unplaced-scaffold na na JAPPVV010000054.1 <> na Primary Assembly 19224 na h1tg000142l unplaced-scaffold na na JAPPVV010000055.1 <> na Primary Assembly 28556 na h1tg000143l unplaced-scaffold na na JAPPVV010000056.1 <> na Primary Assembly 41716 na h1tg000150l unplaced-scaffold na na JAPPVV010000057.1 <> na Primary Assembly 23043 na h1tg000151l unplaced-scaffold na na JAPPVV010000058.1 <> na Primary Assembly 24758 na h1tg000161l unplaced-scaffold na na JAPPVV010000059.1 <> na Primary Assembly 33317 na h1tg000164l unplaced-scaffold na na JAPPVV010000060.1 <> na Primary Assembly 16272 na h1tg000171l unplaced-scaffold na na JAPPVV010000061.1 <> na Primary Assembly 37300 na h1tg000179l unplaced-scaffold na na JAPPVV010000062.1 <> na Primary Assembly 26717 na h1tg000205l unplaced-scaffold na na JAPPVV010000063.1 <> na Primary Assembly 33433 na h1tg000224l unplaced-scaffold na na JAPPVV010000064.1 <> na Primary Assembly 21265 na h1tg000230l unplaced-scaffold na na JAPPVV010000065.1 <> na Primary Assembly 23596 na h1tg000237l unplaced-scaffold na na JAPPVV010000066.1 <> na Primary Assembly 38718 na h1tg000239l unplaced-scaffold na na JAPPVV010000067.1 <> na Primary Assembly 27224 na h1tg000246l unplaced-scaffold na na JAPPVV010000068.1 <> na Primary Assembly 19202 na h1tg000252l unplaced-scaffold na na JAPPVV010000069.1 <> na Primary Assembly 29961 na h1tg000258c unplaced-scaffold na na JAPPVV010000070.1 <> na Primary Assembly 18197 na h1tg000259l unplaced-scaffold na na JAPPVV010000071.1 <> na Primary Assembly 34034 na h1tg000269l unplaced-scaffold na na JAPPVV010000072.1 <> na Primary Assembly 33413 na h1tg000296l unplaced-scaffold na na JAPPVV010000073.1 <> na Primary Assembly 15860 na h1tg000297l unplaced-scaffold na na JAPPVV010000074.1 <> na Primary Assembly 16843 na h1tg000304l unplaced-scaffold na na JAPPVV010000075.1 <> na Primary Assembly 28102 na h1tg000305l unplaced-scaffold na na JAPPVV010000076.1 <> na Primary Assembly 37379 na h1tg000321l unplaced-scaffold na na JAPPVV010000077.1 <> na Primary Assembly 26586 na h1tg000327l unplaced-scaffold na na JAPPVV010000078.1 <> na Primary Assembly 26894 na h1tg000336l unplaced-scaffold na na JAPPVV010000079.1 <> na Primary Assembly 27657 na h1tg000365l unplaced-scaffold na na JAPPVV010000080.1 <> na Primary Assembly 36747 na h1tg000375l unplaced-scaffold na na JAPPVV010000081.1 <> na Primary Assembly 31387 na h1tg000384l unplaced-scaffold na na JAPPVV010000082.1 <> na Primary Assembly 12949 na h1tg000393l unplaced-scaffold na na JAPPVV010000083.1 <> na Primary Assembly 25631 na h1tg000399l unplaced-scaffold na na JAPPVV010000084.1 <> na Primary Assembly 16955 na h1tg000432l unplaced-scaffold na na JAPPVV010000085.1 <> na Primary Assembly 29360 na h1tg000447l unplaced-scaffold na na JAPPVV010000086.1 <> na Primary Assembly 14955 na h1tg000451l unplaced-scaffold na na JAPPVV010000087.1 <> na Primary Assembly 16486 na h1tg000477l unplaced-scaffold na na JAPPVV010000088.1 <> na Primary Assembly 16647 na h1tg000489l unplaced-scaffold na na JAPPVV010000089.1 <> na Primary Assembly 22137 na h1tg000490l unplaced-scaffold na na JAPPVV010000090.1 <> na Primary Assembly 24022 na h1tg000503l unplaced-scaffold na na JAPPVV010000091.1 <> na Primary Assembly 23882 na h1tg000508l unplaced-scaffold na na JAPPVV010000092.1 <> na Primary Assembly 18635 na h1tg000516l unplaced-scaffold na na JAPPVV010000093.1 <> na Primary Assembly 19136 na h2tg000020l unplaced-scaffold na na JAPPVV010000094.1 <> na Primary Assembly 164280 na h2tg000028l unplaced-scaffold na na JAPPVV010000095.1 <> na Primary Assembly 27959 na h2tg000040l unplaced-scaffold na na JAPPVV010000096.1 <> na Primary Assembly 47719 na h2tg000044l unplaced-scaffold na na JAPPVV010000097.1 <> na Primary Assembly 29237 na h2tg000045l unplaced-scaffold na na JAPPVV010000098.1 <> na Primary Assembly 110844 na h2tg000046l unplaced-scaffold na na JAPPVV010000099.1 <> na Primary Assembly 68911 na h2tg000049l unplaced-scaffold na na JAPPVV010000100.1 <> na Primary Assembly 76270 na h2tg000052l unplaced-scaffold na na JAPPVV010000101.1 <> na Primary Assembly 44884 na h2tg000053l unplaced-scaffold na na JAPPVV010000102.1 <> na Primary Assembly 20117 na h2tg000055l unplaced-scaffold na na JAPPVV010000103.1 <> na Primary Assembly 29591 na h2tg000062l unplaced-scaffold na na JAPPVV010000104.1 <> na Primary Assembly 77289 na h2tg000084l unplaced-scaffold na na JAPPVV010000105.1 <> na Primary Assembly 29746 na h2tg000086l unplaced-scaffold na na JAPPVV010000106.1 <> na Primary Assembly 35235 na h2tg000087l unplaced-scaffold na na JAPPVV010000107.1 <> na Primary Assembly 40266 na h2tg000099l unplaced-scaffold na na JAPPVV010000108.1 <> na Primary Assembly 26934 na h2tg000103l unplaced-scaffold na na JAPPVV010000109.1 <> na Primary Assembly 31284 na h2tg000117l unplaced-scaffold na na JAPPVV010000110.1 <> na Primary Assembly 31902 na h2tg000134l unplaced-scaffold na na JAPPVV010000111.1 <> na Primary Assembly 32794 na h2tg000136l unplaced-scaffold na na JAPPVV010000112.1 <> na Primary Assembly 35110 na h2tg000152l unplaced-scaffold na na JAPPVV010000113.1 <> na Primary Assembly 24155 na h2tg000154l unplaced-scaffold na na JAPPVV010000114.1 <> na Primary Assembly 21497 na h2tg000157l unplaced-scaffold na na JAPPVV010000115.1 <> na Primary Assembly 15874 na